Multiple sequence alignment - TraesCS5A01G317300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G317300 chr5A 100.000 6289 0 0 1 6289 528277611 528271323 0.000000e+00 11614.0
1 TraesCS5A01G317300 chr5A 87.319 899 77 10 4400 5281 37084898 37084020 0.000000e+00 994.0
2 TraesCS5A01G317300 chr5A 92.754 138 10 0 3668 3805 37085026 37084889 3.850000e-47 200.0
3 TraesCS5A01G317300 chr5A 100.000 30 0 0 2458 2487 528275007 528274978 8.810000e-04 56.5
4 TraesCS5A01G317300 chr5A 100.000 30 0 0 2605 2634 528275154 528275125 8.810000e-04 56.5
5 TraesCS5A01G317300 chr5A 100.000 28 0 0 1954 1981 528275571 528275544 1.100000e-02 52.8
6 TraesCS5A01G317300 chr5A 100.000 28 0 0 2041 2068 528275658 528275631 1.100000e-02 52.8
7 TraesCS5A01G317300 chr5D 93.411 3506 129 38 166 3595 415652165 415648686 0.000000e+00 5101.0
8 TraesCS5A01G317300 chr5D 94.118 2312 88 19 3633 5916 415648597 415646306 0.000000e+00 3472.0
9 TraesCS5A01G317300 chr5D 87.446 1155 104 18 4400 5533 46076335 46075201 0.000000e+00 1291.0
10 TraesCS5A01G317300 chr5D 94.624 186 10 0 2501 2686 295930131 295930316 7.980000e-74 289.0
11 TraesCS5A01G317300 chr5D 94.839 155 8 0 5963 6117 541998865 541999019 6.300000e-60 243.0
12 TraesCS5A01G317300 chr5D 92.105 152 10 2 5966 6116 295068599 295068749 4.940000e-51 213.0
13 TraesCS5A01G317300 chr5D 91.216 148 13 0 5966 6113 27097557 27097410 1.070000e-47 202.0
14 TraesCS5A01G317300 chr5D 92.481 133 10 0 3673 3805 46076458 46076326 2.310000e-44 191.0
15 TraesCS5A01G317300 chr5D 100.000 30 0 0 2605 2634 415649827 415649798 8.810000e-04 56.5
16 TraesCS5A01G317300 chr5D 100.000 28 0 0 1954 1981 415650244 415650217 1.100000e-02 52.8
17 TraesCS5A01G317300 chr5D 100.000 28 0 0 2041 2068 415650331 415650304 1.100000e-02 52.8
18 TraesCS5A01G317300 chr5B 96.343 2762 72 5 2333 5088 502027044 502024306 0.000000e+00 4514.0
19 TraesCS5A01G317300 chr5B 88.010 2327 102 39 125 2341 502029454 502027195 0.000000e+00 2588.0
20 TraesCS5A01G317300 chr5B 88.214 840 66 20 5093 5916 502024130 502023308 0.000000e+00 972.0
21 TraesCS5A01G317300 chr5B 90.805 87 8 0 1980 2066 502027643 502027557 3.980000e-22 117.0
22 TraesCS5A01G317300 chr5B 100.000 28 0 0 1954 1981 502027495 502027468 1.100000e-02 52.8
23 TraesCS5A01G317300 chr3B 88.080 646 51 6 465 1091 47169402 47168764 0.000000e+00 743.0
24 TraesCS5A01G317300 chr1A 97.315 149 4 0 5966 6114 61340303 61340451 2.910000e-63 254.0
25 TraesCS5A01G317300 chr7D 94.702 151 8 0 5966 6116 118376485 118376635 1.050000e-57 235.0
26 TraesCS5A01G317300 chr7D 81.029 311 44 9 515 815 87509164 87508859 3.790000e-57 233.0
27 TraesCS5A01G317300 chr7D 86.000 100 11 1 981 1077 87508766 87508667 3.100000e-18 104.0
28 TraesCS5A01G317300 chr3D 92.105 152 10 2 5966 6116 140426453 140426303 4.940000e-51 213.0
29 TraesCS5A01G317300 chr1B 92.105 152 10 2 5966 6116 424529949 424529799 4.940000e-51 213.0
30 TraesCS5A01G317300 chr4B 92.806 139 9 1 5966 6104 75755450 75755313 3.850000e-47 200.0
31 TraesCS5A01G317300 chr2B 85.714 196 18 5 865 1060 759190176 759189991 1.380000e-46 198.0
32 TraesCS5A01G317300 chr2B 88.957 163 11 3 648 809 759190362 759190206 1.790000e-45 195.0
33 TraesCS5A01G317300 chr6D 94.286 105 6 0 6013 6117 409845989 409846093 1.810000e-35 161.0
34 TraesCS5A01G317300 chr7A 89.000 100 8 1 981 1077 89045718 89045619 3.080000e-23 121.0
35 TraesCS5A01G317300 chr7B 81.046 153 18 4 671 822 36493145 36493003 1.850000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G317300 chr5A 528271323 528277611 6288 True 2366.52 11614 100.0000 1 6289 5 chr5A.!!$R2 6288
1 TraesCS5A01G317300 chr5A 37084020 37085026 1006 True 597.00 994 90.0365 3668 5281 2 chr5A.!!$R1 1613
2 TraesCS5A01G317300 chr5D 415646306 415652165 5859 True 1747.02 5101 97.5058 166 5916 5 chr5D.!!$R3 5750
3 TraesCS5A01G317300 chr5D 46075201 46076458 1257 True 741.00 1291 89.9635 3673 5533 2 chr5D.!!$R2 1860
4 TraesCS5A01G317300 chr5B 502023308 502029454 6146 True 1648.76 4514 92.6744 125 5916 5 chr5B.!!$R1 5791
5 TraesCS5A01G317300 chr3B 47168764 47169402 638 True 743.00 743 88.0800 465 1091 1 chr3B.!!$R1 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.036388 AGGTGGTGTGGCATTCTACG 60.036 55.000 0.00 0.00 0.00 3.51 F
123 124 0.240945 CGGCAATGTGGAACCAGTTC 59.759 55.000 1.77 1.77 38.80 3.01 F
976 1073 0.448990 TTGACAGAAGATGCGCATGC 59.551 50.000 30.76 18.81 43.20 4.06 F
2504 2812 0.748005 GCCGGTAGCATCATGGTGTT 60.748 55.000 8.00 3.83 42.97 3.32 F
3411 3740 1.001974 GGGACCAAAAATCAACAGGCC 59.998 52.381 0.00 0.00 0.00 5.19 F
4514 4894 0.975040 AGTTCCTGCTCCTGCTCGAT 60.975 55.000 0.00 0.00 40.48 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1876 2025 0.905357 CGTCACCCTCCTGGATCTTT 59.095 55.000 0.0 0.0 38.00 2.52 R
1935 2084 0.933097 CGTCATTGCCTTCTCCATCG 59.067 55.000 0.0 0.0 0.00 3.84 R
2718 3043 1.344438 ACTCGTTCAAGCAGTGGATCA 59.656 47.619 0.0 0.0 0.00 2.92 R
3966 4346 0.741221 GCCTCTTTCTGCCGTACTGG 60.741 60.000 0.0 0.0 42.50 4.00 R
4658 5038 0.470341 GCTTACCCACATCCCTCTCC 59.530 60.000 0.0 0.0 0.00 3.71 R
5930 6504 0.098376 GCTCCTGCTCTGATTTTGCG 59.902 55.000 0.0 0.0 36.03 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 8.645730 AAAAACCATTTTTGGCATTTGAATTC 57.354 26.923 0.00 0.00 41.04 2.17
44 45 5.610235 ACCATTTTTGGCATTTGAATTCG 57.390 34.783 0.04 0.00 0.00 3.34
45 46 5.062528 ACCATTTTTGGCATTTGAATTCGT 58.937 33.333 0.04 0.00 0.00 3.85
46 47 5.530543 ACCATTTTTGGCATTTGAATTCGTT 59.469 32.000 0.04 0.00 0.00 3.85
47 48 6.079120 CCATTTTTGGCATTTGAATTCGTTC 58.921 36.000 0.04 0.00 0.00 3.95
48 49 6.073112 CCATTTTTGGCATTTGAATTCGTTCT 60.073 34.615 0.04 0.00 0.00 3.01
49 50 7.117523 CCATTTTTGGCATTTGAATTCGTTCTA 59.882 33.333 0.04 0.00 0.00 2.10
50 51 7.636259 TTTTTGGCATTTGAATTCGTTCTAG 57.364 32.000 0.04 0.00 0.00 2.43
51 52 4.963276 TGGCATTTGAATTCGTTCTAGG 57.037 40.909 0.04 0.00 0.00 3.02
52 53 4.331968 TGGCATTTGAATTCGTTCTAGGT 58.668 39.130 0.04 0.00 0.00 3.08
53 54 4.764823 TGGCATTTGAATTCGTTCTAGGTT 59.235 37.500 0.04 0.00 0.00 3.50
54 55 5.242838 TGGCATTTGAATTCGTTCTAGGTTT 59.757 36.000 0.04 0.00 0.00 3.27
55 56 6.431543 TGGCATTTGAATTCGTTCTAGGTTTA 59.568 34.615 0.04 0.00 0.00 2.01
56 57 7.040340 TGGCATTTGAATTCGTTCTAGGTTTAA 60.040 33.333 0.04 0.00 0.00 1.52
57 58 7.810759 GGCATTTGAATTCGTTCTAGGTTTAAA 59.189 33.333 0.04 0.00 0.00 1.52
58 59 8.635983 GCATTTGAATTCGTTCTAGGTTTAAAC 58.364 33.333 9.98 9.98 0.00 2.01
77 78 2.220653 CCATGATGGTCAAAGGTGGT 57.779 50.000 2.54 0.00 31.35 4.16
78 79 1.820519 CCATGATGGTCAAAGGTGGTG 59.179 52.381 2.54 0.00 31.35 4.17
79 80 2.517959 CATGATGGTCAAAGGTGGTGT 58.482 47.619 0.00 0.00 0.00 4.16
80 81 1.979855 TGATGGTCAAAGGTGGTGTG 58.020 50.000 0.00 0.00 0.00 3.82
81 82 1.247567 GATGGTCAAAGGTGGTGTGG 58.752 55.000 0.00 0.00 0.00 4.17
82 83 0.827507 ATGGTCAAAGGTGGTGTGGC 60.828 55.000 0.00 0.00 0.00 5.01
83 84 1.454847 GGTCAAAGGTGGTGTGGCA 60.455 57.895 0.00 0.00 0.00 4.92
84 85 0.827507 GGTCAAAGGTGGTGTGGCAT 60.828 55.000 0.00 0.00 0.00 4.40
85 86 1.039856 GTCAAAGGTGGTGTGGCATT 58.960 50.000 0.00 0.00 0.00 3.56
86 87 1.000274 GTCAAAGGTGGTGTGGCATTC 60.000 52.381 0.00 0.00 0.00 2.67
87 88 1.133513 TCAAAGGTGGTGTGGCATTCT 60.134 47.619 0.00 0.00 0.00 2.40
88 89 2.107378 TCAAAGGTGGTGTGGCATTCTA 59.893 45.455 0.00 0.00 0.00 2.10
89 90 2.200373 AAGGTGGTGTGGCATTCTAC 57.800 50.000 0.00 0.00 0.00 2.59
90 91 0.036388 AGGTGGTGTGGCATTCTACG 60.036 55.000 0.00 0.00 0.00 3.51
91 92 1.644786 GGTGGTGTGGCATTCTACGC 61.645 60.000 0.00 0.00 0.00 4.42
92 93 1.739929 TGGTGTGGCATTCTACGCG 60.740 57.895 3.53 3.53 0.00 6.01
93 94 1.740296 GGTGTGGCATTCTACGCGT 60.740 57.895 19.17 19.17 0.00 6.01
94 95 1.419922 GTGTGGCATTCTACGCGTG 59.580 57.895 24.59 12.26 0.00 5.34
95 96 1.011968 GTGTGGCATTCTACGCGTGA 61.012 55.000 24.59 14.59 0.00 4.35
96 97 1.011968 TGTGGCATTCTACGCGTGAC 61.012 55.000 24.59 7.40 0.00 3.67
97 98 1.447140 TGGCATTCTACGCGTGACC 60.447 57.895 24.59 13.88 0.00 4.02
98 99 2.171725 GGCATTCTACGCGTGACCC 61.172 63.158 24.59 12.78 0.00 4.46
99 100 2.514013 GCATTCTACGCGTGACCCG 61.514 63.158 24.59 8.76 40.40 5.28
100 101 1.153901 CATTCTACGCGTGACCCGT 60.154 57.895 24.59 0.00 42.26 5.28
101 102 1.138047 CATTCTACGCGTGACCCGTC 61.138 60.000 24.59 0.00 39.88 4.79
102 103 1.310933 ATTCTACGCGTGACCCGTCT 61.311 55.000 24.59 0.00 39.88 4.18
103 104 1.915614 TTCTACGCGTGACCCGTCTC 61.916 60.000 24.59 0.00 39.88 3.36
104 105 3.392595 CTACGCGTGACCCGTCTCC 62.393 68.421 24.59 0.00 39.88 3.71
115 116 2.264480 CGTCTCCGGCAATGTGGA 59.736 61.111 0.00 0.00 0.00 4.02
116 117 1.375396 CGTCTCCGGCAATGTGGAA 60.375 57.895 0.00 0.00 32.89 3.53
117 118 1.635663 CGTCTCCGGCAATGTGGAAC 61.636 60.000 0.00 0.62 32.89 3.62
118 119 1.002624 TCTCCGGCAATGTGGAACC 60.003 57.895 0.00 0.00 34.36 3.62
119 120 1.303236 CTCCGGCAATGTGGAACCA 60.303 57.895 0.00 0.00 34.36 3.67
120 121 1.303236 TCCGGCAATGTGGAACCAG 60.303 57.895 0.00 0.00 34.36 4.00
121 122 1.603455 CCGGCAATGTGGAACCAGT 60.603 57.895 0.00 0.00 34.36 4.00
122 123 1.178534 CCGGCAATGTGGAACCAGTT 61.179 55.000 0.00 0.00 34.36 3.16
123 124 0.240945 CGGCAATGTGGAACCAGTTC 59.759 55.000 1.77 1.77 38.80 3.01
128 129 3.796504 GCAATGTGGAACCAGTTCACAAG 60.797 47.826 12.32 11.29 41.20 3.16
132 133 2.752903 GTGGAACCAGTTCACAAGTTGT 59.247 45.455 12.32 1.64 41.20 3.32
196 199 4.335416 ACCCATTCCACACAGAGTAATTG 58.665 43.478 0.00 0.00 0.00 2.32
244 252 4.389576 GCAAACAGCCGAGCACCG 62.390 66.667 0.00 0.00 37.23 4.94
368 394 0.551879 CGACCCTCTCTCCCTTCCTA 59.448 60.000 0.00 0.00 0.00 2.94
428 454 3.060000 AGCATCGACGGACCGACA 61.060 61.111 23.38 5.93 41.70 4.35
470 510 1.963338 GCAACAGCAAGGTCGAGCT 60.963 57.895 12.24 12.24 42.94 4.09
475 515 0.528017 CAGCAAGGTCGAGCTACTGA 59.472 55.000 29.69 0.00 39.50 3.41
545 591 3.680786 GCACCCCCGTTTCCTTGC 61.681 66.667 0.00 0.00 0.00 4.01
604 650 1.937546 GACGAAATGCCAGGCAAGGG 61.938 60.000 20.84 10.81 43.62 3.95
638 692 1.142778 GCGCTGTCTCTGTTCGATCC 61.143 60.000 0.00 0.00 0.00 3.36
646 700 1.815421 CTGTTCGATCCAAGGCCCG 60.815 63.158 0.00 0.00 0.00 6.13
682 736 3.114693 GCTGAAGCACTTGAGAAATCG 57.885 47.619 0.73 0.00 41.59 3.34
754 813 1.959899 CTCGACGGCATGCTTGACAC 61.960 60.000 18.92 0.00 0.00 3.67
760 819 2.780643 CATGCTTGACACGAGGCG 59.219 61.111 0.00 0.00 0.00 5.52
851 936 1.407936 GGACAGATAGCAGCTGGAGA 58.592 55.000 17.12 0.00 37.69 3.71
877 974 3.928727 TTGAATTCAAGCAGCTTCCTG 57.071 42.857 16.91 0.00 42.13 3.86
905 1002 3.470709 ACATAGGACTGGATCAATTGCG 58.529 45.455 0.00 0.00 0.00 4.85
937 1034 1.255667 TTAGTGGGCTGGGAGACGAC 61.256 60.000 0.00 0.00 31.42 4.34
968 1065 3.265791 GACGGAATGCTTGACAGAAGAT 58.734 45.455 0.00 0.00 0.00 2.40
976 1073 0.448990 TTGACAGAAGATGCGCATGC 59.551 50.000 30.76 18.81 43.20 4.06
1102 1224 5.064452 GTCAGTGATCATCAACAGATGGTTC 59.936 44.000 0.00 4.61 39.66 3.62
1228 1353 3.061848 CCCAACCACATGGCGTCC 61.062 66.667 0.00 0.00 39.26 4.79
1288 1415 2.669781 TCCCCTATAACTACCACCACG 58.330 52.381 0.00 0.00 0.00 4.94
1319 1453 2.239400 CCTTCCCTCCCAAACTCAAAC 58.761 52.381 0.00 0.00 0.00 2.93
1322 1456 1.133606 TCCCTCCCAAACTCAAACCAC 60.134 52.381 0.00 0.00 0.00 4.16
1564 1698 1.663173 GGAGATAGACGAGGCCAGC 59.337 63.158 5.01 0.00 0.00 4.85
1742 1891 2.599578 ACACGGTACCTGACGCCT 60.600 61.111 10.90 0.00 0.00 5.52
2152 2301 1.064758 ACCAAATGGCCTCATAGCGAA 60.065 47.619 3.32 0.00 39.32 4.70
2204 2353 4.761739 TGGCTTCCAACTCTGTTTCTAATG 59.238 41.667 0.00 0.00 0.00 1.90
2259 2408 5.728637 TCTTCTCTGTATCTTGCTGTTGA 57.271 39.130 0.00 0.00 0.00 3.18
2391 2699 1.140852 TGGTCAAGTGGTCAGTGGAAG 59.859 52.381 0.00 0.00 0.00 3.46
2488 2796 6.477688 AGCATTCAATCAAATTGATTAAGCCG 59.522 34.615 19.42 8.43 44.60 5.52
2502 2810 3.736483 GCCGGTAGCATCATGGTG 58.264 61.111 1.90 0.10 42.97 4.17
2503 2811 1.153168 GCCGGTAGCATCATGGTGT 60.153 57.895 8.00 0.00 42.97 4.16
2504 2812 0.748005 GCCGGTAGCATCATGGTGTT 60.748 55.000 8.00 3.83 42.97 3.32
2505 2813 1.299541 CCGGTAGCATCATGGTGTTC 58.700 55.000 8.00 0.00 0.00 3.18
2506 2814 1.134401 CCGGTAGCATCATGGTGTTCT 60.134 52.381 8.00 0.00 0.00 3.01
2507 2815 2.632377 CGGTAGCATCATGGTGTTCTT 58.368 47.619 8.00 0.00 0.00 2.52
2508 2816 3.009723 CGGTAGCATCATGGTGTTCTTT 58.990 45.455 8.00 0.00 0.00 2.52
2509 2817 3.440173 CGGTAGCATCATGGTGTTCTTTT 59.560 43.478 8.00 0.00 0.00 2.27
2510 2818 4.634004 CGGTAGCATCATGGTGTTCTTTTA 59.366 41.667 8.00 0.00 0.00 1.52
2511 2819 5.447279 CGGTAGCATCATGGTGTTCTTTTAC 60.447 44.000 8.00 0.00 0.00 2.01
2512 2820 5.414454 GGTAGCATCATGGTGTTCTTTTACA 59.586 40.000 8.00 0.00 0.00 2.41
2513 2821 6.095440 GGTAGCATCATGGTGTTCTTTTACAT 59.905 38.462 8.00 0.00 0.00 2.29
2514 2822 5.957798 AGCATCATGGTGTTCTTTTACATG 58.042 37.500 8.00 0.00 40.06 3.21
2515 2823 5.104374 GCATCATGGTGTTCTTTTACATGG 58.896 41.667 8.00 0.00 39.39 3.66
2516 2824 4.782019 TCATGGTGTTCTTTTACATGGC 57.218 40.909 0.00 0.00 39.39 4.40
2533 2856 6.325919 ACATGGCGTTCTTTTCTTCATTTA 57.674 33.333 0.00 0.00 0.00 1.40
2583 2906 1.155042 CTGCTCAGTTCAAGTCCAGC 58.845 55.000 0.00 0.00 0.00 4.85
2586 2909 1.270518 GCTCAGTTCAAGTCCAGCAGA 60.271 52.381 0.00 0.00 0.00 4.26
2596 2919 5.121105 TCAAGTCCAGCAGAATCATGTATG 58.879 41.667 0.00 0.00 0.00 2.39
2634 2957 9.525409 GTAGCATTCAATCAAATTGATTAAGCT 57.475 29.630 24.90 24.90 44.60 3.74
2718 3043 3.295973 ACAATTGCTGTGTTGTTAGGGT 58.704 40.909 5.05 0.00 36.69 4.34
2870 3195 1.135575 GCCAAATTTCTCTGCTCACCG 60.136 52.381 0.00 0.00 0.00 4.94
3411 3740 1.001974 GGGACCAAAAATCAACAGGCC 59.998 52.381 0.00 0.00 0.00 5.19
3452 3781 7.609760 TTCGAGTTGATGTTTATGCTATGTT 57.390 32.000 0.00 0.00 0.00 2.71
3635 3964 7.498900 TGGTCATTAGTGGTCATGATCAATTAC 59.501 37.037 14.97 8.04 37.55 1.89
3636 3965 7.041098 GGTCATTAGTGGTCATGATCAATTACC 60.041 40.741 14.97 12.84 31.71 2.85
3966 4346 2.777832 AGAACTGTTCTCAGGGCATC 57.222 50.000 17.00 0.00 45.14 3.91
4074 4454 1.985614 CTGACCCCACTGCTGATGA 59.014 57.895 0.00 0.00 0.00 2.92
4388 4768 5.783360 TGAGGATGTTGTACTAAGGAAGGAA 59.217 40.000 0.00 0.00 0.00 3.36
4465 4845 3.439293 CTGTTAGTGACGTGCCTGATAG 58.561 50.000 0.00 0.00 0.00 2.08
4514 4894 0.975040 AGTTCCTGCTCCTGCTCGAT 60.975 55.000 0.00 0.00 40.48 3.59
4586 4966 7.549134 GCTATGGAATTGGTGAATATCGTCATA 59.451 37.037 0.00 0.00 0.00 2.15
4610 4990 2.092429 GGAAGATGCTGGTGGAATGGTA 60.092 50.000 0.00 0.00 0.00 3.25
4658 5038 5.627367 GATCTCCTTGATCTTCGTCATTACG 59.373 44.000 0.00 0.00 46.85 3.18
5014 5400 2.726760 CAGCCTCGTGAGAAATATACGC 59.273 50.000 0.00 0.00 41.32 4.42
5101 5660 5.427857 TCCCTAGTAATGATTGGGACCTA 57.572 43.478 0.00 0.00 41.57 3.08
5135 5694 6.607735 AGTTTTGATCAATGCTTTGTTTGG 57.392 33.333 9.40 0.00 34.32 3.28
5137 5696 6.258507 AGTTTTGATCAATGCTTTGTTTGGTC 59.741 34.615 9.40 2.20 34.29 4.02
5154 5713 6.373216 TGTTTGGTCAAGTATATTTCCTTCGG 59.627 38.462 0.00 0.00 0.00 4.30
5215 5774 0.470341 GGGCCCAAGATCTACTCCAC 59.530 60.000 19.95 0.00 0.00 4.02
5363 5926 4.811024 AGTTGTGTACCATATGAGCGAATG 59.189 41.667 3.65 0.00 0.00 2.67
5470 6035 7.049799 TCTTAATTTCTGAAAGTGGGGTTTG 57.950 36.000 12.84 0.00 33.76 2.93
5555 6122 6.716628 AGCCTCTTGTCATTTCTTGAAATACA 59.283 34.615 8.09 9.85 35.70 2.29
5565 6132 8.980610 TCATTTCTTGAAATACAATGCACAAAG 58.019 29.630 8.09 0.00 37.88 2.77
5575 6142 9.979578 AAATACAATGCACAAAGTTATGAAAGA 57.020 25.926 0.00 0.00 0.00 2.52
5577 6144 9.793252 ATACAATGCACAAAGTTATGAAAGATC 57.207 29.630 0.00 0.00 0.00 2.75
5611 6178 6.428159 TCCTCGAAAATTTGAAGGAGAAGAAG 59.572 38.462 10.78 0.00 0.00 2.85
5615 6182 5.339423 AAATTTGAAGGAGAAGAAGGGGA 57.661 39.130 0.00 0.00 0.00 4.81
5619 6186 1.268283 AAGGAGAAGAAGGGGAGCGG 61.268 60.000 0.00 0.00 0.00 5.52
5628 6195 1.278413 GAAGGGGAGCGGTTACTTTCT 59.722 52.381 6.96 0.00 0.00 2.52
5651 6218 9.828039 TTCTGATAGGAATATATAGCTGCAATG 57.172 33.333 1.02 0.00 0.00 2.82
5652 6219 7.930325 TCTGATAGGAATATATAGCTGCAATGC 59.070 37.037 1.02 0.00 0.00 3.56
5672 6244 4.732784 TGCTTTTCAAAGATGTTATCGGC 58.267 39.130 3.35 0.00 38.28 5.54
5673 6245 4.217334 TGCTTTTCAAAGATGTTATCGGCA 59.783 37.500 3.35 0.00 38.28 5.69
5674 6246 4.795278 GCTTTTCAAAGATGTTATCGGCAG 59.205 41.667 3.35 0.00 38.28 4.85
5695 6267 7.078228 GGCAGTAGTACAAAGTTTGATTGAAG 58.922 38.462 22.23 7.28 0.00 3.02
5696 6268 7.255139 GGCAGTAGTACAAAGTTTGATTGAAGT 60.255 37.037 22.23 7.25 0.00 3.01
5697 6269 8.770828 GCAGTAGTACAAAGTTTGATTGAAGTA 58.229 33.333 22.23 6.42 0.00 2.24
5706 6278 9.364989 CAAAGTTTGATTGAAGTAAAAAGGACA 57.635 29.630 10.19 0.00 0.00 4.02
5711 6283 7.945033 TGATTGAAGTAAAAAGGACATTTGC 57.055 32.000 0.00 0.00 0.00 3.68
5712 6284 7.725251 TGATTGAAGTAAAAAGGACATTTGCT 58.275 30.769 0.00 0.00 34.75 3.91
5715 6287 8.419076 TTGAAGTAAAAAGGACATTTGCTTTC 57.581 30.769 0.00 0.00 42.17 2.62
5716 6288 6.695278 TGAAGTAAAAAGGACATTTGCTTTCG 59.305 34.615 0.00 0.00 42.17 3.46
5718 6290 6.206498 AGTAAAAAGGACATTTGCTTTCGTC 58.794 36.000 0.00 0.00 42.17 4.20
5720 6292 4.489679 AAAGGACATTTGCTTTCGTCTC 57.510 40.909 0.00 0.00 38.99 3.36
5746 6318 6.668541 TCTGCTGAAGAAAATAGTGTATGC 57.331 37.500 0.00 0.00 29.54 3.14
5748 6320 5.500234 TGCTGAAGAAAATAGTGTATGCCT 58.500 37.500 0.00 0.00 0.00 4.75
5749 6321 5.355071 TGCTGAAGAAAATAGTGTATGCCTG 59.645 40.000 0.00 0.00 0.00 4.85
5761 6333 3.627577 GTGTATGCCTGATTCGTTTCCAT 59.372 43.478 0.00 0.00 0.00 3.41
5771 6343 4.819088 TGATTCGTTTCCATGTCTTTGACA 59.181 37.500 2.77 2.77 46.90 3.58
5774 6346 4.447290 TCGTTTCCATGTCTTTGACAAGA 58.553 39.130 4.46 2.70 45.96 3.02
5775 6347 4.511454 TCGTTTCCATGTCTTTGACAAGAG 59.489 41.667 4.46 0.00 45.96 2.85
5776 6348 4.540824 GTTTCCATGTCTTTGACAAGAGC 58.459 43.478 4.46 0.36 45.96 4.09
5777 6349 3.777106 TCCATGTCTTTGACAAGAGCT 57.223 42.857 4.46 0.00 45.96 4.09
5778 6350 4.090761 TCCATGTCTTTGACAAGAGCTT 57.909 40.909 4.46 0.00 45.96 3.74
5794 6368 0.463620 GCTTGTGCTCCAAAAACCCA 59.536 50.000 0.00 0.00 36.03 4.51
5810 6384 1.293179 CCACGACAGTGCTCCATGA 59.707 57.895 0.00 0.00 46.62 3.07
5811 6385 0.738762 CCACGACAGTGCTCCATGAG 60.739 60.000 0.00 0.00 46.62 2.90
5813 6387 0.969149 ACGACAGTGCTCCATGAGAA 59.031 50.000 0.00 0.00 0.00 2.87
5820 6394 4.080695 ACAGTGCTCCATGAGAACACATAT 60.081 41.667 15.52 3.31 40.53 1.78
5825 6399 5.529800 TGCTCCATGAGAACACATATCATTG 59.470 40.000 0.00 0.00 31.38 2.82
5848 6422 4.508124 GCTCAGATTCCAAATAGTACACCG 59.492 45.833 0.00 0.00 0.00 4.94
5853 6427 7.546667 TCAGATTCCAAATAGTACACCGTAAAC 59.453 37.037 0.00 0.00 0.00 2.01
5864 6438 2.175811 CGTAAACAAGGCAGCGGC 59.824 61.111 0.00 0.00 40.13 6.53
5881 6455 1.204467 CGGCAGCAACCAACCATATTT 59.796 47.619 0.00 0.00 0.00 1.40
5882 6456 2.620242 GGCAGCAACCAACCATATTTG 58.380 47.619 0.00 0.00 0.00 2.32
5917 6491 8.644374 ATTTAATTAGTTTCACTTAGCCACCA 57.356 30.769 0.00 0.00 0.00 4.17
5918 6492 8.466617 TTTAATTAGTTTCACTTAGCCACCAA 57.533 30.769 0.00 0.00 0.00 3.67
5919 6493 5.959618 ATTAGTTTCACTTAGCCACCAAC 57.040 39.130 0.00 0.00 0.00 3.77
5920 6494 3.290948 AGTTTCACTTAGCCACCAACA 57.709 42.857 0.00 0.00 0.00 3.33
5921 6495 3.214328 AGTTTCACTTAGCCACCAACAG 58.786 45.455 0.00 0.00 0.00 3.16
5922 6496 1.604604 TTCACTTAGCCACCAACAGC 58.395 50.000 0.00 0.00 0.00 4.40
5923 6497 0.250727 TCACTTAGCCACCAACAGCC 60.251 55.000 0.00 0.00 0.00 4.85
5924 6498 0.537143 CACTTAGCCACCAACAGCCA 60.537 55.000 0.00 0.00 0.00 4.75
5925 6499 0.184933 ACTTAGCCACCAACAGCCAA 59.815 50.000 0.00 0.00 0.00 4.52
5926 6500 0.598065 CTTAGCCACCAACAGCCAAC 59.402 55.000 0.00 0.00 0.00 3.77
5927 6501 0.184933 TTAGCCACCAACAGCCAACT 59.815 50.000 0.00 0.00 0.00 3.16
5939 6513 1.317613 AGCCAACTGACGCAAAATCA 58.682 45.000 0.00 0.00 0.00 2.57
5941 6515 1.266718 GCCAACTGACGCAAAATCAGA 59.733 47.619 8.92 0.00 45.46 3.27
5942 6516 2.666619 GCCAACTGACGCAAAATCAGAG 60.667 50.000 8.92 1.60 45.46 3.35
5943 6517 2.578495 CAACTGACGCAAAATCAGAGC 58.422 47.619 8.92 0.00 45.46 4.09
5944 6518 1.882912 ACTGACGCAAAATCAGAGCA 58.117 45.000 8.92 0.00 45.46 4.26
5945 6519 1.802960 ACTGACGCAAAATCAGAGCAG 59.197 47.619 8.92 0.00 45.46 4.24
5946 6520 1.129998 CTGACGCAAAATCAGAGCAGG 59.870 52.381 0.00 0.00 45.46 4.85
5947 6521 1.270785 TGACGCAAAATCAGAGCAGGA 60.271 47.619 0.00 0.00 0.00 3.86
5948 6522 1.396301 GACGCAAAATCAGAGCAGGAG 59.604 52.381 0.00 0.00 0.00 3.69
5949 6523 0.098376 CGCAAAATCAGAGCAGGAGC 59.902 55.000 0.00 0.00 42.56 4.70
5950 6524 1.171308 GCAAAATCAGAGCAGGAGCA 58.829 50.000 0.00 0.00 45.49 4.26
5951 6525 1.135460 GCAAAATCAGAGCAGGAGCAC 60.135 52.381 0.00 0.00 45.49 4.40
5952 6526 2.434428 CAAAATCAGAGCAGGAGCACT 58.566 47.619 0.00 0.00 45.49 4.40
5953 6527 2.399916 AAATCAGAGCAGGAGCACTC 57.600 50.000 0.00 0.00 45.49 3.51
5954 6528 1.273759 AATCAGAGCAGGAGCACTCA 58.726 50.000 0.00 0.00 45.49 3.41
5955 6529 1.273759 ATCAGAGCAGGAGCACTCAA 58.726 50.000 0.00 0.00 45.49 3.02
5956 6530 1.051008 TCAGAGCAGGAGCACTCAAA 58.949 50.000 0.00 0.00 45.49 2.69
5957 6531 1.001746 TCAGAGCAGGAGCACTCAAAG 59.998 52.381 0.00 0.00 45.49 2.77
5958 6532 1.001746 CAGAGCAGGAGCACTCAAAGA 59.998 52.381 0.00 0.00 45.49 2.52
5959 6533 1.907936 AGAGCAGGAGCACTCAAAGAT 59.092 47.619 0.00 0.00 45.49 2.40
5960 6534 2.305343 AGAGCAGGAGCACTCAAAGATT 59.695 45.455 0.00 0.00 45.49 2.40
5961 6535 3.080319 GAGCAGGAGCACTCAAAGATTT 58.920 45.455 0.00 0.00 45.49 2.17
5962 6536 3.080319 AGCAGGAGCACTCAAAGATTTC 58.920 45.455 0.00 0.00 45.49 2.17
5963 6537 2.159599 GCAGGAGCACTCAAAGATTTCG 60.160 50.000 0.00 0.00 41.58 3.46
5964 6538 2.417933 CAGGAGCACTCAAAGATTTCGG 59.582 50.000 0.00 0.00 0.00 4.30
5965 6539 1.131315 GGAGCACTCAAAGATTTCGGC 59.869 52.381 0.00 0.00 0.00 5.54
5966 6540 1.806542 GAGCACTCAAAGATTTCGGCA 59.193 47.619 0.00 0.00 0.00 5.69
5967 6541 1.808945 AGCACTCAAAGATTTCGGCAG 59.191 47.619 0.00 0.00 0.00 4.85
5968 6542 1.730446 GCACTCAAAGATTTCGGCAGC 60.730 52.381 0.00 0.00 0.00 5.25
5969 6543 0.798776 ACTCAAAGATTTCGGCAGCG 59.201 50.000 0.00 0.00 0.00 5.18
5970 6544 0.522076 CTCAAAGATTTCGGCAGCGC 60.522 55.000 0.00 0.00 0.00 5.92
5971 6545 0.955428 TCAAAGATTTCGGCAGCGCT 60.955 50.000 2.64 2.64 0.00 5.92
5972 6546 0.795735 CAAAGATTTCGGCAGCGCTG 60.796 55.000 32.83 32.83 36.06 5.18
5983 6557 1.920051 CAGCGCTGCTATACACACG 59.080 57.895 26.68 0.00 36.40 4.49
5984 6558 0.525455 CAGCGCTGCTATACACACGA 60.525 55.000 26.68 0.00 36.40 4.35
5985 6559 0.385751 AGCGCTGCTATACACACGAT 59.614 50.000 10.39 0.00 36.99 3.73
5986 6560 0.504384 GCGCTGCTATACACACGATG 59.496 55.000 0.00 0.00 0.00 3.84
5987 6561 1.864029 GCGCTGCTATACACACGATGA 60.864 52.381 0.00 0.00 0.00 2.92
5988 6562 2.047040 CGCTGCTATACACACGATGAG 58.953 52.381 0.00 0.00 0.00 2.90
5989 6563 1.789464 GCTGCTATACACACGATGAGC 59.211 52.381 0.00 0.00 0.00 4.26
5991 6565 1.269051 TGCTATACACACGATGAGCGG 60.269 52.381 0.00 0.00 46.49 5.52
5992 6566 1.269102 GCTATACACACGATGAGCGGT 60.269 52.381 0.00 0.00 46.49 5.68
5993 6567 2.385315 CTATACACACGATGAGCGGTG 58.615 52.381 9.48 9.48 46.49 4.94
5994 6568 0.179111 ATACACACGATGAGCGGTGG 60.179 55.000 14.14 0.00 46.49 4.61
5995 6569 1.245376 TACACACGATGAGCGGTGGA 61.245 55.000 14.14 4.90 46.49 4.02
5996 6570 2.094659 CACACGATGAGCGGTGGAC 61.095 63.158 0.00 0.00 46.49 4.02
5997 6571 2.880879 CACGATGAGCGGTGGACG 60.881 66.667 0.00 0.00 46.49 4.79
6000 6574 1.099295 ACGATGAGCGGTGGACGATA 61.099 55.000 0.00 0.00 43.91 2.92
6001 6575 0.241213 CGATGAGCGGTGGACGATAT 59.759 55.000 0.00 0.00 43.91 1.63
6002 6576 1.702886 GATGAGCGGTGGACGATATG 58.297 55.000 0.00 0.00 43.91 1.78
6003 6577 1.000163 GATGAGCGGTGGACGATATGT 60.000 52.381 0.00 0.00 43.91 2.29
6004 6578 0.102300 TGAGCGGTGGACGATATGTG 59.898 55.000 0.00 0.00 43.91 3.21
6005 6579 0.384309 GAGCGGTGGACGATATGTGA 59.616 55.000 0.00 0.00 43.91 3.58
6006 6580 1.202371 GAGCGGTGGACGATATGTGAA 60.202 52.381 0.00 0.00 43.91 3.18
6007 6581 3.363431 GAGCGGTGGACGATATGTGAAC 61.363 54.545 0.00 0.00 43.91 3.18
6009 6583 2.572191 GGTGGACGATATGTGAACGA 57.428 50.000 0.00 0.00 0.00 3.85
6010 6584 2.190981 GGTGGACGATATGTGAACGAC 58.809 52.381 0.00 0.00 0.00 4.34
6011 6585 2.416296 GGTGGACGATATGTGAACGACA 60.416 50.000 0.00 0.00 39.53 4.35
6012 6586 3.247442 GTGGACGATATGTGAACGACAA 58.753 45.455 0.00 0.00 38.36 3.18
6013 6587 3.863424 GTGGACGATATGTGAACGACAAT 59.137 43.478 0.00 0.00 38.36 2.71
6014 6588 3.862845 TGGACGATATGTGAACGACAATG 59.137 43.478 0.00 0.00 38.36 2.82
6015 6589 3.302480 GGACGATATGTGAACGACAATGC 60.302 47.826 0.00 0.00 38.36 3.56
6016 6590 3.258228 ACGATATGTGAACGACAATGCA 58.742 40.909 0.00 0.00 38.36 3.96
6017 6591 3.306973 ACGATATGTGAACGACAATGCAG 59.693 43.478 0.00 0.00 38.36 4.41
6018 6592 3.551485 CGATATGTGAACGACAATGCAGA 59.449 43.478 0.00 0.00 38.36 4.26
6019 6593 4.209911 CGATATGTGAACGACAATGCAGAT 59.790 41.667 0.00 0.00 38.36 2.90
6020 6594 5.611197 CGATATGTGAACGACAATGCAGATC 60.611 44.000 0.00 0.00 38.36 2.75
6021 6595 2.765122 TGTGAACGACAATGCAGATCA 58.235 42.857 0.00 0.00 0.00 2.92
6022 6596 2.738314 TGTGAACGACAATGCAGATCAG 59.262 45.455 0.00 0.00 0.00 2.90
6023 6597 1.733912 TGAACGACAATGCAGATCAGC 59.266 47.619 2.62 2.62 0.00 4.26
6024 6598 2.005451 GAACGACAATGCAGATCAGCT 58.995 47.619 11.68 0.00 34.99 4.24
6025 6599 1.649664 ACGACAATGCAGATCAGCTC 58.350 50.000 11.68 0.00 34.99 4.09
6026 6600 1.066645 ACGACAATGCAGATCAGCTCA 60.067 47.619 11.68 0.00 34.99 4.26
6027 6601 2.210961 CGACAATGCAGATCAGCTCAT 58.789 47.619 11.68 0.00 34.99 2.90
6028 6602 2.221286 CGACAATGCAGATCAGCTCATC 59.779 50.000 11.68 0.00 34.99 2.92
6029 6603 2.548904 GACAATGCAGATCAGCTCATCC 59.451 50.000 11.68 0.00 34.99 3.51
6030 6604 2.092592 ACAATGCAGATCAGCTCATCCA 60.093 45.455 11.68 0.00 34.99 3.41
6031 6605 3.149981 CAATGCAGATCAGCTCATCCAT 58.850 45.455 11.68 0.00 34.99 3.41
6032 6606 2.256117 TGCAGATCAGCTCATCCATG 57.744 50.000 11.68 0.00 34.99 3.66
6033 6607 0.875728 GCAGATCAGCTCATCCATGC 59.124 55.000 2.32 0.00 0.00 4.06
6034 6608 1.814248 GCAGATCAGCTCATCCATGCA 60.814 52.381 6.90 0.00 32.79 3.96
6035 6609 1.874231 CAGATCAGCTCATCCATGCAC 59.126 52.381 0.00 0.00 0.00 4.57
6036 6610 1.489230 AGATCAGCTCATCCATGCACA 59.511 47.619 0.00 0.00 0.00 4.57
6037 6611 2.092592 AGATCAGCTCATCCATGCACAA 60.093 45.455 0.00 0.00 0.00 3.33
6038 6612 2.203470 TCAGCTCATCCATGCACAAA 57.797 45.000 0.00 0.00 0.00 2.83
6039 6613 2.516906 TCAGCTCATCCATGCACAAAA 58.483 42.857 0.00 0.00 0.00 2.44
6040 6614 2.229543 TCAGCTCATCCATGCACAAAAC 59.770 45.455 0.00 0.00 0.00 2.43
6041 6615 2.230508 CAGCTCATCCATGCACAAAACT 59.769 45.455 0.00 0.00 0.00 2.66
6042 6616 2.230508 AGCTCATCCATGCACAAAACTG 59.769 45.455 0.00 0.00 0.00 3.16
6043 6617 2.229543 GCTCATCCATGCACAAAACTGA 59.770 45.455 0.00 0.00 0.00 3.41
6044 6618 3.305539 GCTCATCCATGCACAAAACTGAA 60.306 43.478 0.00 0.00 0.00 3.02
6045 6619 4.482386 CTCATCCATGCACAAAACTGAAG 58.518 43.478 0.00 0.00 0.00 3.02
6046 6620 3.890756 TCATCCATGCACAAAACTGAAGT 59.109 39.130 0.00 0.00 0.00 3.01
6047 6621 3.713858 TCCATGCACAAAACTGAAGTG 57.286 42.857 0.00 0.00 36.39 3.16
6048 6622 3.286353 TCCATGCACAAAACTGAAGTGA 58.714 40.909 0.00 0.00 35.33 3.41
6049 6623 3.698539 TCCATGCACAAAACTGAAGTGAA 59.301 39.130 0.00 0.00 35.33 3.18
6050 6624 4.159321 TCCATGCACAAAACTGAAGTGAAA 59.841 37.500 0.00 0.00 35.33 2.69
6051 6625 5.051816 CCATGCACAAAACTGAAGTGAAAT 58.948 37.500 0.00 0.00 35.33 2.17
6052 6626 6.040278 TCCATGCACAAAACTGAAGTGAAATA 59.960 34.615 0.00 0.00 35.33 1.40
6053 6627 6.364165 CCATGCACAAAACTGAAGTGAAATAG 59.636 38.462 0.00 0.00 35.33 1.73
6054 6628 6.691754 TGCACAAAACTGAAGTGAAATAGA 57.308 33.333 0.00 0.00 35.33 1.98
6055 6629 6.494842 TGCACAAAACTGAAGTGAAATAGAC 58.505 36.000 0.00 0.00 35.33 2.59
6056 6630 5.621228 GCACAAAACTGAAGTGAAATAGACG 59.379 40.000 0.00 0.00 35.33 4.18
6057 6631 6.136071 CACAAAACTGAAGTGAAATAGACGG 58.864 40.000 0.00 0.00 35.33 4.79
6058 6632 5.147162 CAAAACTGAAGTGAAATAGACGGC 58.853 41.667 0.00 0.00 0.00 5.68
6059 6633 3.963428 ACTGAAGTGAAATAGACGGCT 57.037 42.857 0.00 0.00 0.00 5.52
6060 6634 3.589988 ACTGAAGTGAAATAGACGGCTG 58.410 45.455 0.00 0.00 0.00 4.85
6061 6635 2.932614 CTGAAGTGAAATAGACGGCTGG 59.067 50.000 0.00 0.00 0.00 4.85
6062 6636 2.565391 TGAAGTGAAATAGACGGCTGGA 59.435 45.455 0.00 0.00 0.00 3.86
6063 6637 3.197766 TGAAGTGAAATAGACGGCTGGAT 59.802 43.478 0.00 0.00 0.00 3.41
6064 6638 3.914426 AGTGAAATAGACGGCTGGATT 57.086 42.857 0.00 0.00 0.00 3.01
6065 6639 4.222124 AGTGAAATAGACGGCTGGATTT 57.778 40.909 0.00 0.00 0.00 2.17
6066 6640 3.941483 AGTGAAATAGACGGCTGGATTTG 59.059 43.478 0.00 0.00 0.00 2.32
6067 6641 3.065371 GTGAAATAGACGGCTGGATTTGG 59.935 47.826 0.00 0.00 0.00 3.28
6068 6642 1.680338 AATAGACGGCTGGATTTGGC 58.320 50.000 0.00 0.00 0.00 4.52
6069 6643 0.839946 ATAGACGGCTGGATTTGGCT 59.160 50.000 0.00 0.00 0.00 4.75
6070 6644 0.107703 TAGACGGCTGGATTTGGCTG 60.108 55.000 0.00 0.00 40.32 4.85
6071 6645 2.436109 ACGGCTGGATTTGGCTGT 59.564 55.556 0.00 0.00 42.39 4.40
6072 6646 1.675641 ACGGCTGGATTTGGCTGTC 60.676 57.895 0.00 0.00 43.54 3.51
6073 6647 2.753966 CGGCTGGATTTGGCTGTCG 61.754 63.158 0.00 0.00 0.00 4.35
6074 6648 1.675641 GGCTGGATTTGGCTGTCGT 60.676 57.895 0.00 0.00 0.00 4.34
6075 6649 1.244019 GGCTGGATTTGGCTGTCGTT 61.244 55.000 0.00 0.00 0.00 3.85
6076 6650 0.169009 GCTGGATTTGGCTGTCGTTC 59.831 55.000 0.00 0.00 0.00 3.95
6077 6651 0.804989 CTGGATTTGGCTGTCGTTCC 59.195 55.000 0.00 0.00 0.00 3.62
6078 6652 0.608035 TGGATTTGGCTGTCGTTCCC 60.608 55.000 0.00 0.00 0.00 3.97
6079 6653 1.644786 GGATTTGGCTGTCGTTCCCG 61.645 60.000 0.00 0.00 0.00 5.14
6080 6654 0.953960 GATTTGGCTGTCGTTCCCGT 60.954 55.000 0.00 0.00 35.01 5.28
6081 6655 1.234615 ATTTGGCTGTCGTTCCCGTG 61.235 55.000 0.00 0.00 35.01 4.94
6082 6656 2.596553 TTTGGCTGTCGTTCCCGTGT 62.597 55.000 0.00 0.00 35.01 4.49
6083 6657 2.737376 GGCTGTCGTTCCCGTGTC 60.737 66.667 0.00 0.00 35.01 3.67
6084 6658 3.103911 GCTGTCGTTCCCGTGTCG 61.104 66.667 0.00 0.00 35.01 4.35
6085 6659 2.333938 CTGTCGTTCCCGTGTCGT 59.666 61.111 0.00 0.00 35.01 4.34
6086 6660 2.014554 CTGTCGTTCCCGTGTCGTG 61.015 63.158 0.00 0.00 35.01 4.35
6087 6661 3.400590 GTCGTTCCCGTGTCGTGC 61.401 66.667 0.00 0.00 35.01 5.34
6088 6662 3.902086 TCGTTCCCGTGTCGTGCA 61.902 61.111 0.00 0.00 35.01 4.57
6089 6663 3.403057 CGTTCCCGTGTCGTGCAG 61.403 66.667 0.00 0.00 0.00 4.41
6090 6664 3.041940 GTTCCCGTGTCGTGCAGG 61.042 66.667 0.00 0.00 0.00 4.85
6108 6682 3.648507 AGGGACTGTCGTCTGTATAGT 57.351 47.619 1.07 0.00 40.10 2.12
6109 6683 4.767578 AGGGACTGTCGTCTGTATAGTA 57.232 45.455 1.07 0.00 40.10 1.82
6110 6684 4.706035 AGGGACTGTCGTCTGTATAGTAG 58.294 47.826 1.07 0.00 40.10 2.57
6111 6685 4.163839 AGGGACTGTCGTCTGTATAGTAGT 59.836 45.833 1.07 0.00 40.10 2.73
6112 6686 4.880696 GGGACTGTCGTCTGTATAGTAGTT 59.119 45.833 1.07 0.00 40.10 2.24
6113 6687 5.356470 GGGACTGTCGTCTGTATAGTAGTTT 59.644 44.000 1.07 0.00 40.10 2.66
6114 6688 6.458070 GGGACTGTCGTCTGTATAGTAGTTTC 60.458 46.154 1.07 0.00 40.10 2.78
6115 6689 6.104439 ACTGTCGTCTGTATAGTAGTTTCG 57.896 41.667 0.00 0.00 0.00 3.46
6116 6690 5.871524 ACTGTCGTCTGTATAGTAGTTTCGA 59.128 40.000 0.00 0.00 0.00 3.71
6117 6691 6.369890 ACTGTCGTCTGTATAGTAGTTTCGAA 59.630 38.462 0.00 0.00 0.00 3.71
6118 6692 6.769076 TGTCGTCTGTATAGTAGTTTCGAAG 58.231 40.000 0.00 0.00 0.00 3.79
6119 6693 6.591448 TGTCGTCTGTATAGTAGTTTCGAAGA 59.409 38.462 0.00 0.00 0.00 2.87
6120 6694 7.279536 TGTCGTCTGTATAGTAGTTTCGAAGAT 59.720 37.037 0.00 0.00 35.04 2.40
6121 6695 8.121708 GTCGTCTGTATAGTAGTTTCGAAGATT 58.878 37.037 0.00 0.00 35.04 2.40
6122 6696 8.671921 TCGTCTGTATAGTAGTTTCGAAGATTT 58.328 33.333 0.00 0.00 35.04 2.17
6123 6697 8.945930 CGTCTGTATAGTAGTTTCGAAGATTTC 58.054 37.037 0.00 0.00 35.04 2.17
6124 6698 9.784680 GTCTGTATAGTAGTTTCGAAGATTTCA 57.215 33.333 0.00 0.00 35.04 2.69
6126 6700 9.790389 CTGTATAGTAGTTTCGAAGATTTCAGT 57.210 33.333 0.00 0.00 35.04 3.41
6127 6701 9.784680 TGTATAGTAGTTTCGAAGATTTCAGTC 57.215 33.333 0.00 0.00 35.04 3.51
6128 6702 9.784680 GTATAGTAGTTTCGAAGATTTCAGTCA 57.215 33.333 0.00 0.00 35.04 3.41
6129 6703 8.918961 ATAGTAGTTTCGAAGATTTCAGTCAG 57.081 34.615 0.00 0.00 35.04 3.51
6130 6704 6.982852 AGTAGTTTCGAAGATTTCAGTCAGA 58.017 36.000 0.00 0.00 35.04 3.27
6131 6705 7.607250 AGTAGTTTCGAAGATTTCAGTCAGAT 58.393 34.615 0.00 0.00 35.04 2.90
6132 6706 6.959671 AGTTTCGAAGATTTCAGTCAGATC 57.040 37.500 0.00 0.00 35.04 2.75
6133 6707 6.459066 AGTTTCGAAGATTTCAGTCAGATCA 58.541 36.000 0.00 0.00 35.04 2.92
6134 6708 6.367422 AGTTTCGAAGATTTCAGTCAGATCAC 59.633 38.462 0.00 0.00 35.04 3.06
6135 6709 5.651387 TCGAAGATTTCAGTCAGATCACT 57.349 39.130 0.00 0.00 0.00 3.41
6136 6710 6.030548 TCGAAGATTTCAGTCAGATCACTT 57.969 37.500 0.00 0.00 0.00 3.16
6137 6711 6.459066 TCGAAGATTTCAGTCAGATCACTTT 58.541 36.000 0.00 0.00 0.00 2.66
6138 6712 6.587990 TCGAAGATTTCAGTCAGATCACTTTC 59.412 38.462 0.00 0.00 0.00 2.62
6139 6713 6.183360 CGAAGATTTCAGTCAGATCACTTTCC 60.183 42.308 0.00 0.00 0.00 3.13
6140 6714 6.119240 AGATTTCAGTCAGATCACTTTCCA 57.881 37.500 0.00 0.00 0.00 3.53
6141 6715 6.537355 AGATTTCAGTCAGATCACTTTCCAA 58.463 36.000 0.00 0.00 0.00 3.53
6142 6716 7.000472 AGATTTCAGTCAGATCACTTTCCAAA 59.000 34.615 0.00 0.00 0.00 3.28
6143 6717 6.377327 TTTCAGTCAGATCACTTTCCAAAC 57.623 37.500 0.00 0.00 0.00 2.93
6144 6718 5.296151 TCAGTCAGATCACTTTCCAAACT 57.704 39.130 0.00 0.00 0.00 2.66
6145 6719 5.684704 TCAGTCAGATCACTTTCCAAACTT 58.315 37.500 0.00 0.00 0.00 2.66
6146 6720 6.826668 TCAGTCAGATCACTTTCCAAACTTA 58.173 36.000 0.00 0.00 0.00 2.24
6147 6721 6.931281 TCAGTCAGATCACTTTCCAAACTTAG 59.069 38.462 0.00 0.00 0.00 2.18
6148 6722 5.703130 AGTCAGATCACTTTCCAAACTTAGC 59.297 40.000 0.00 0.00 0.00 3.09
6149 6723 4.690748 TCAGATCACTTTCCAAACTTAGCG 59.309 41.667 0.00 0.00 0.00 4.26
6150 6724 4.452455 CAGATCACTTTCCAAACTTAGCGT 59.548 41.667 0.00 0.00 0.00 5.07
6151 6725 4.691216 AGATCACTTTCCAAACTTAGCGTC 59.309 41.667 0.00 0.00 0.00 5.19
6152 6726 3.135994 TCACTTTCCAAACTTAGCGTCC 58.864 45.455 0.00 0.00 0.00 4.79
6153 6727 3.139077 CACTTTCCAAACTTAGCGTCCT 58.861 45.455 0.00 0.00 0.00 3.85
6154 6728 3.564225 CACTTTCCAAACTTAGCGTCCTT 59.436 43.478 0.00 0.00 0.00 3.36
6155 6729 4.036380 CACTTTCCAAACTTAGCGTCCTTT 59.964 41.667 0.00 0.00 0.00 3.11
6156 6730 4.036380 ACTTTCCAAACTTAGCGTCCTTTG 59.964 41.667 0.00 0.00 0.00 2.77
6157 6731 1.877443 TCCAAACTTAGCGTCCTTTGC 59.123 47.619 0.00 0.00 0.00 3.68
6158 6732 1.606668 CCAAACTTAGCGTCCTTTGCA 59.393 47.619 0.00 0.00 33.85 4.08
6159 6733 2.034053 CCAAACTTAGCGTCCTTTGCAA 59.966 45.455 0.00 0.00 33.85 4.08
6160 6734 3.490078 CCAAACTTAGCGTCCTTTGCAAA 60.490 43.478 12.14 12.14 33.85 3.68
6161 6735 3.626028 AACTTAGCGTCCTTTGCAAAG 57.374 42.857 28.69 28.69 35.79 2.77
6162 6736 2.572290 ACTTAGCGTCCTTTGCAAAGT 58.428 42.857 31.67 18.63 34.20 2.66
6163 6737 2.548480 ACTTAGCGTCCTTTGCAAAGTC 59.452 45.455 31.67 23.49 34.20 3.01
6164 6738 2.248280 TAGCGTCCTTTGCAAAGTCA 57.752 45.000 31.67 18.56 34.20 3.41
6165 6739 0.663153 AGCGTCCTTTGCAAAGTCAC 59.337 50.000 31.67 25.79 34.20 3.67
6166 6740 0.380378 GCGTCCTTTGCAAAGTCACA 59.620 50.000 31.67 14.07 34.20 3.58
6167 6741 1.597937 GCGTCCTTTGCAAAGTCACAG 60.598 52.381 31.67 22.81 34.20 3.66
6168 6742 1.002468 CGTCCTTTGCAAAGTCACAGG 60.002 52.381 31.67 19.84 35.71 4.00
6169 6743 2.024414 GTCCTTTGCAAAGTCACAGGT 58.976 47.619 31.67 0.00 35.83 4.00
6170 6744 2.023673 TCCTTTGCAAAGTCACAGGTG 58.976 47.619 31.67 17.17 35.83 4.00
6171 6745 1.067516 CCTTTGCAAAGTCACAGGTGG 59.932 52.381 31.67 14.68 34.20 4.61
6172 6746 0.459489 TTTGCAAAGTCACAGGTGGC 59.541 50.000 8.05 0.00 34.93 5.01
6173 6747 1.723608 TTGCAAAGTCACAGGTGGCG 61.724 55.000 0.00 0.00 40.75 5.69
6174 6748 2.639286 CAAAGTCACAGGTGGCGC 59.361 61.111 0.00 0.00 40.75 6.53
6175 6749 2.594592 AAAGTCACAGGTGGCGCC 60.595 61.111 22.73 22.73 40.75 6.53
6176 6750 4.988598 AAGTCACAGGTGGCGCCG 62.989 66.667 23.90 10.06 43.70 6.46
6192 6766 3.737172 CGCCGCCCTTCCTTGTTG 61.737 66.667 0.00 0.00 0.00 3.33
6193 6767 3.373565 GCCGCCCTTCCTTGTTGG 61.374 66.667 0.00 0.00 37.10 3.77
6194 6768 3.373565 CCGCCCTTCCTTGTTGGC 61.374 66.667 0.00 0.00 40.54 4.52
6195 6769 3.373565 CGCCCTTCCTTGTTGGCC 61.374 66.667 0.00 0.00 40.87 5.36
6196 6770 2.997315 GCCCTTCCTTGTTGGCCC 60.997 66.667 0.00 0.00 37.94 5.80
6197 6771 2.283894 CCCTTCCTTGTTGGCCCC 60.284 66.667 0.00 0.00 35.26 5.80
6198 6772 2.283894 CCTTCCTTGTTGGCCCCC 60.284 66.667 0.00 0.00 35.26 5.40
6199 6773 2.525592 CTTCCTTGTTGGCCCCCA 59.474 61.111 0.00 0.00 35.26 4.96
6200 6774 1.607467 CTTCCTTGTTGGCCCCCAG 60.607 63.158 0.00 0.00 33.81 4.45
6201 6775 3.826265 TTCCTTGTTGGCCCCCAGC 62.826 63.158 0.00 0.00 42.60 4.85
6202 6776 4.305956 CCTTGTTGGCCCCCAGCT 62.306 66.667 0.00 0.00 43.05 4.24
6203 6777 2.677875 CTTGTTGGCCCCCAGCTC 60.678 66.667 0.00 0.00 43.05 4.09
6204 6778 4.659172 TTGTTGGCCCCCAGCTCG 62.659 66.667 0.00 0.00 43.05 5.03
6212 6786 3.407967 CCCCAGCTCGCCCCTTAA 61.408 66.667 0.00 0.00 0.00 1.85
6213 6787 2.190578 CCCAGCTCGCCCCTTAAG 59.809 66.667 0.00 0.00 0.00 1.85
6214 6788 2.670148 CCCAGCTCGCCCCTTAAGT 61.670 63.158 0.97 0.00 0.00 2.24
6215 6789 1.450312 CCAGCTCGCCCCTTAAGTG 60.450 63.158 0.97 0.00 0.00 3.16
6216 6790 1.450312 CAGCTCGCCCCTTAAGTGG 60.450 63.158 0.00 0.00 0.00 4.00
6217 6791 2.124695 GCTCGCCCCTTAAGTGGG 60.125 66.667 19.52 19.52 46.56 4.61
6222 6796 2.124695 CCCCTTAAGTGGGCGCTC 60.125 66.667 7.64 2.47 45.78 5.03
6223 6797 2.668632 CCCTTAAGTGGGCGCTCA 59.331 61.111 5.44 5.44 40.84 4.26
6224 6798 1.002624 CCCTTAAGTGGGCGCTCAA 60.003 57.895 13.97 0.00 40.84 3.02
6225 6799 1.305930 CCCTTAAGTGGGCGCTCAAC 61.306 60.000 13.97 6.65 40.84 3.18
6226 6800 1.305930 CCTTAAGTGGGCGCTCAACC 61.306 60.000 13.97 0.00 0.00 3.77
6227 6801 1.635663 CTTAAGTGGGCGCTCAACCG 61.636 60.000 13.97 0.00 0.00 4.44
6228 6802 3.599285 TAAGTGGGCGCTCAACCGG 62.599 63.158 13.97 0.00 0.00 5.28
6234 6808 2.813908 GCGCTCAACCGGTCGAAT 60.814 61.111 16.71 0.00 0.00 3.34
6235 6809 1.517694 GCGCTCAACCGGTCGAATA 60.518 57.895 16.71 0.00 0.00 1.75
6236 6810 1.749609 GCGCTCAACCGGTCGAATAC 61.750 60.000 16.71 0.00 0.00 1.89
6237 6811 1.469126 CGCTCAACCGGTCGAATACG 61.469 60.000 8.04 2.24 41.26 3.06
6238 6812 0.179156 GCTCAACCGGTCGAATACGA 60.179 55.000 8.04 0.00 46.56 3.43
6249 6823 2.598589 TCGAATACGACCAAGGAAACG 58.401 47.619 0.00 0.00 43.81 3.60
6250 6824 1.657094 CGAATACGACCAAGGAAACGG 59.343 52.381 0.00 0.00 42.66 4.44
6251 6825 1.395954 GAATACGACCAAGGAAACGGC 59.604 52.381 0.00 0.00 0.00 5.68
6252 6826 0.611714 ATACGACCAAGGAAACGGCT 59.388 50.000 0.00 0.00 0.00 5.52
6253 6827 0.320073 TACGACCAAGGAAACGGCTG 60.320 55.000 0.00 0.00 0.00 4.85
6254 6828 2.325082 CGACCAAGGAAACGGCTGG 61.325 63.158 0.00 0.00 36.07 4.85
6255 6829 1.228154 GACCAAGGAAACGGCTGGT 60.228 57.895 0.00 0.00 42.83 4.00
6256 6830 1.228154 ACCAAGGAAACGGCTGGTC 60.228 57.895 0.00 0.00 37.94 4.02
6257 6831 2.325082 CCAAGGAAACGGCTGGTCG 61.325 63.158 0.00 0.00 0.00 4.79
6258 6832 2.668550 AAGGAAACGGCTGGTCGC 60.669 61.111 0.00 0.00 38.13 5.19
6259 6833 3.178540 AAGGAAACGGCTGGTCGCT 62.179 57.895 0.00 0.00 39.13 4.93
6279 6853 3.499737 CGGTGGCGGCTCAACATC 61.500 66.667 11.43 0.00 0.00 3.06
6280 6854 3.499737 GGTGGCGGCTCAACATCG 61.500 66.667 11.43 0.00 0.00 3.84
6281 6855 2.434185 GTGGCGGCTCAACATCGA 60.434 61.111 11.43 0.00 0.00 3.59
6282 6856 2.125552 TGGCGGCTCAACATCGAG 60.126 61.111 11.43 0.00 36.02 4.04
6283 6857 2.892425 GGCGGCTCAACATCGAGG 60.892 66.667 0.00 0.00 33.36 4.63
6286 6860 3.567797 GGCTCAACATCGAGGCGC 61.568 66.667 0.00 0.00 46.98 6.53
6287 6861 2.510238 GCTCAACATCGAGGCGCT 60.510 61.111 7.64 0.00 33.36 5.92
6288 6862 2.806856 GCTCAACATCGAGGCGCTG 61.807 63.158 7.64 0.00 33.36 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 7.434602 CGAATTCAAATGCCAAAAATGGTTTTT 59.565 29.630 6.22 0.00 43.20 1.94
19 20 6.916932 CGAATTCAAATGCCAAAAATGGTTTT 59.083 30.769 6.22 0.00 37.43 2.43
20 21 6.039159 ACGAATTCAAATGCCAAAAATGGTTT 59.961 30.769 6.22 0.00 0.00 3.27
21 22 5.530543 ACGAATTCAAATGCCAAAAATGGTT 59.469 32.000 6.22 0.00 0.00 3.67
22 23 5.062528 ACGAATTCAAATGCCAAAAATGGT 58.937 33.333 6.22 0.00 0.00 3.55
23 24 5.610235 ACGAATTCAAATGCCAAAAATGG 57.390 34.783 6.22 0.00 0.00 3.16
24 25 6.890558 AGAACGAATTCAAATGCCAAAAATG 58.109 32.000 6.22 0.00 37.29 2.32
25 26 7.331687 CCTAGAACGAATTCAAATGCCAAAAAT 59.668 33.333 6.22 0.00 37.29 1.82
26 27 6.644592 CCTAGAACGAATTCAAATGCCAAAAA 59.355 34.615 6.22 0.00 37.29 1.94
27 28 6.155827 CCTAGAACGAATTCAAATGCCAAAA 58.844 36.000 6.22 0.00 37.29 2.44
28 29 5.242838 ACCTAGAACGAATTCAAATGCCAAA 59.757 36.000 6.22 0.00 37.29 3.28
29 30 4.764823 ACCTAGAACGAATTCAAATGCCAA 59.235 37.500 6.22 0.00 37.29 4.52
30 31 4.331968 ACCTAGAACGAATTCAAATGCCA 58.668 39.130 6.22 0.00 37.29 4.92
31 32 4.965119 ACCTAGAACGAATTCAAATGCC 57.035 40.909 6.22 0.00 37.29 4.40
32 33 8.635983 GTTTAAACCTAGAACGAATTCAAATGC 58.364 33.333 7.12 0.00 37.29 3.56
33 34 9.124807 GGTTTAAACCTAGAACGAATTCAAATG 57.875 33.333 26.98 0.00 45.75 2.32
58 59 1.820519 CACCACCTTTGACCATCATGG 59.179 52.381 0.54 0.54 45.02 3.66
59 60 2.229543 CACACCACCTTTGACCATCATG 59.770 50.000 0.00 0.00 0.00 3.07
60 61 2.517959 CACACCACCTTTGACCATCAT 58.482 47.619 0.00 0.00 0.00 2.45
61 62 1.478471 CCACACCACCTTTGACCATCA 60.478 52.381 0.00 0.00 0.00 3.07
62 63 1.247567 CCACACCACCTTTGACCATC 58.752 55.000 0.00 0.00 0.00 3.51
63 64 0.827507 GCCACACCACCTTTGACCAT 60.828 55.000 0.00 0.00 0.00 3.55
64 65 1.454847 GCCACACCACCTTTGACCA 60.455 57.895 0.00 0.00 0.00 4.02
65 66 0.827507 ATGCCACACCACCTTTGACC 60.828 55.000 0.00 0.00 0.00 4.02
66 67 1.000274 GAATGCCACACCACCTTTGAC 60.000 52.381 0.00 0.00 0.00 3.18
67 68 1.133513 AGAATGCCACACCACCTTTGA 60.134 47.619 0.00 0.00 0.00 2.69
68 69 1.331214 AGAATGCCACACCACCTTTG 58.669 50.000 0.00 0.00 0.00 2.77
69 70 2.514803 GTAGAATGCCACACCACCTTT 58.485 47.619 0.00 0.00 0.00 3.11
70 71 1.610624 CGTAGAATGCCACACCACCTT 60.611 52.381 0.00 0.00 0.00 3.50
71 72 0.036388 CGTAGAATGCCACACCACCT 60.036 55.000 0.00 0.00 0.00 4.00
72 73 1.644786 GCGTAGAATGCCACACCACC 61.645 60.000 0.00 0.00 0.00 4.61
73 74 1.794222 GCGTAGAATGCCACACCAC 59.206 57.895 0.00 0.00 0.00 4.16
74 75 1.739929 CGCGTAGAATGCCACACCA 60.740 57.895 0.00 0.00 0.00 4.17
75 76 1.740296 ACGCGTAGAATGCCACACC 60.740 57.895 11.67 0.00 0.00 4.16
76 77 1.011968 TCACGCGTAGAATGCCACAC 61.012 55.000 13.44 0.00 0.00 3.82
77 78 1.011968 GTCACGCGTAGAATGCCACA 61.012 55.000 13.44 0.00 0.00 4.17
78 79 1.693083 GGTCACGCGTAGAATGCCAC 61.693 60.000 13.44 0.00 0.00 5.01
79 80 1.447140 GGTCACGCGTAGAATGCCA 60.447 57.895 13.44 0.00 0.00 4.92
80 81 2.171725 GGGTCACGCGTAGAATGCC 61.172 63.158 13.44 9.53 0.00 4.40
81 82 2.514013 CGGGTCACGCGTAGAATGC 61.514 63.158 13.44 0.48 35.14 3.56
82 83 3.688136 CGGGTCACGCGTAGAATG 58.312 61.111 13.44 0.00 35.14 2.67
99 100 1.305930 GGTTCCACATTGCCGGAGAC 61.306 60.000 5.05 0.00 31.51 3.36
100 101 1.002624 GGTTCCACATTGCCGGAGA 60.003 57.895 5.05 0.00 31.51 3.71
101 102 1.303236 TGGTTCCACATTGCCGGAG 60.303 57.895 5.05 0.00 31.51 4.63
102 103 1.303236 CTGGTTCCACATTGCCGGA 60.303 57.895 5.05 0.00 0.00 5.14
103 104 1.178534 AACTGGTTCCACATTGCCGG 61.179 55.000 0.00 0.00 0.00 6.13
104 105 0.240945 GAACTGGTTCCACATTGCCG 59.759 55.000 2.35 0.00 33.64 5.69
105 106 1.000274 GTGAACTGGTTCCACATTGCC 60.000 52.381 10.44 0.00 38.77 4.52
106 107 1.680735 TGTGAACTGGTTCCACATTGC 59.319 47.619 10.44 0.00 38.77 3.56
107 108 3.381272 ACTTGTGAACTGGTTCCACATTG 59.619 43.478 10.44 11.45 38.77 2.82
108 109 3.631250 ACTTGTGAACTGGTTCCACATT 58.369 40.909 10.44 4.10 38.77 2.71
109 110 3.297134 ACTTGTGAACTGGTTCCACAT 57.703 42.857 10.44 0.80 38.77 3.21
110 111 2.752354 CAACTTGTGAACTGGTTCCACA 59.248 45.455 10.44 11.11 38.77 4.17
111 112 2.752903 ACAACTTGTGAACTGGTTCCAC 59.247 45.455 10.44 9.13 38.77 4.02
112 113 3.080300 ACAACTTGTGAACTGGTTCCA 57.920 42.857 10.44 5.96 38.77 3.53
128 129 3.988379 TTCTGGATTTGCTCACACAAC 57.012 42.857 0.00 0.00 0.00 3.32
132 133 7.283127 GGTAGATTATTTCTGGATTTGCTCACA 59.717 37.037 0.00 0.00 35.79 3.58
196 199 4.273969 CAGGATTAGACGAGTGGAGTAGAC 59.726 50.000 0.00 0.00 0.00 2.59
245 253 2.757917 AGAGCCGGAGCACCTCTC 60.758 66.667 5.05 0.00 43.56 3.20
246 254 2.757917 GAGAGCCGGAGCACCTCT 60.758 66.667 5.05 7.00 43.56 3.69
247 255 3.844090 GGAGAGCCGGAGCACCTC 61.844 72.222 5.05 0.75 43.56 3.85
470 510 2.805546 GCCGCCACTCGATCAGTA 59.194 61.111 0.00 0.00 41.67 2.74
575 621 0.865769 GCATTTCGTCGAACACCTGT 59.134 50.000 7.29 0.00 0.00 4.00
604 650 4.785453 CGCCCAGAACTGCCCCTC 62.785 72.222 0.00 0.00 0.00 4.30
638 692 4.479993 CTCCTCTGCCGGGCCTTG 62.480 72.222 17.97 7.00 0.00 3.61
646 700 2.817396 GCACGCTTCTCCTCTGCC 60.817 66.667 0.00 0.00 0.00 4.85
682 736 1.068127 CTAATGGCAGGCCTTTGCATC 59.932 52.381 17.88 3.18 45.86 3.91
706 760 0.685458 GCAGAGCATTGTCCCCCAAT 60.685 55.000 0.00 0.00 44.73 3.16
712 766 0.392729 AGCTGAGCAGAGCATTGTCC 60.393 55.000 7.39 0.00 41.83 4.02
760 819 2.464459 GCTGTACATGGCGCCTCAC 61.464 63.158 29.70 19.07 0.00 3.51
851 936 7.013083 CAGGAAGCTGCTTGAATTCAATAGTAT 59.987 37.037 21.25 13.85 35.02 2.12
877 974 3.384789 TGATCCAGTCCTATGTACTGCAC 59.615 47.826 0.00 0.00 42.47 4.57
924 1021 4.500116 GAGCGTCGTCTCCCAGCC 62.500 72.222 5.65 0.00 0.00 4.85
926 1023 2.487428 CTGAGCGTCGTCTCCCAG 59.513 66.667 12.18 3.71 32.22 4.45
937 1034 2.103143 ATTCCGTCGAGCTGAGCG 59.897 61.111 0.00 0.00 0.00 5.03
976 1073 1.811266 CTTCACTCCATGGCGACGG 60.811 63.158 9.17 0.00 0.00 4.79
1102 1224 3.054434 TGGGAATGTCATTGTAGGTCTGG 60.054 47.826 1.88 0.00 0.00 3.86
1228 1353 2.952310 GGGCTGGCCTTTTTATAGTCTG 59.048 50.000 13.80 0.00 36.10 3.51
1288 1415 1.208293 GGAGGGAAGGTGTGATCTGAC 59.792 57.143 0.00 0.00 0.00 3.51
1347 1481 2.987547 TTGCCTGGCTGCTGCTTC 60.988 61.111 21.03 0.08 39.59 3.86
1625 1774 2.125147 TCGCGGCCAGAATCTTGG 60.125 61.111 6.13 0.00 41.35 3.61
1876 2025 0.905357 CGTCACCCTCCTGGATCTTT 59.095 55.000 0.00 0.00 38.00 2.52
1935 2084 0.933097 CGTCATTGCCTTCTCCATCG 59.067 55.000 0.00 0.00 0.00 3.84
2152 2301 2.347490 CGGTGGCAGGCACTTACT 59.653 61.111 25.17 0.00 34.60 2.24
2204 2353 2.746362 CCAGAACAAGACATGAGCTTCC 59.254 50.000 0.00 0.00 0.00 3.46
2488 2796 5.414454 TGTAAAAGAACACCATGATGCTACC 59.586 40.000 0.00 0.00 0.00 3.18
2502 2810 6.206498 AGAAAAGAACGCCATGTAAAAGAAC 58.794 36.000 0.00 0.00 0.00 3.01
2503 2811 6.385649 AGAAAAGAACGCCATGTAAAAGAA 57.614 33.333 0.00 0.00 0.00 2.52
2504 2812 6.038825 TGAAGAAAAGAACGCCATGTAAAAGA 59.961 34.615 0.00 0.00 0.00 2.52
2505 2813 6.205784 TGAAGAAAAGAACGCCATGTAAAAG 58.794 36.000 0.00 0.00 0.00 2.27
2506 2814 6.137794 TGAAGAAAAGAACGCCATGTAAAA 57.862 33.333 0.00 0.00 0.00 1.52
2507 2815 5.759506 TGAAGAAAAGAACGCCATGTAAA 57.240 34.783 0.00 0.00 0.00 2.01
2508 2816 5.957842 ATGAAGAAAAGAACGCCATGTAA 57.042 34.783 0.00 0.00 0.00 2.41
2509 2817 5.957842 AATGAAGAAAAGAACGCCATGTA 57.042 34.783 0.00 0.00 0.00 2.29
2510 2818 4.853924 AATGAAGAAAAGAACGCCATGT 57.146 36.364 0.00 0.00 0.00 3.21
2511 2819 8.909708 TTATAAATGAAGAAAAGAACGCCATG 57.090 30.769 0.00 0.00 0.00 3.66
2512 2820 8.956426 TCTTATAAATGAAGAAAAGAACGCCAT 58.044 29.630 0.00 0.00 29.97 4.40
2513 2821 8.330466 TCTTATAAATGAAGAAAAGAACGCCA 57.670 30.769 0.00 0.00 29.97 5.69
2514 2822 9.062674 GTTCTTATAAATGAAGAAAAGAACGCC 57.937 33.333 9.26 0.00 42.88 5.68
2555 2878 5.594926 ACTTGAACTGAGCAGGAAATTTTG 58.405 37.500 2.20 0.00 0.00 2.44
2596 2919 4.944962 TGAATGCTACTGTTACACATGC 57.055 40.909 0.00 0.00 0.00 4.06
2634 2957 7.692460 AATTTGATTGCATACAAGAGAGACA 57.308 32.000 0.00 0.00 39.69 3.41
2718 3043 1.344438 ACTCGTTCAAGCAGTGGATCA 59.656 47.619 0.00 0.00 0.00 2.92
2819 3144 2.508526 ACATCCAGCAGAAAACAGTCC 58.491 47.619 0.00 0.00 0.00 3.85
2870 3195 8.571336 AGCAATAATATTTCATTGGCTAGTGAC 58.429 33.333 11.25 0.00 33.61 3.67
3121 3450 6.549364 TCAATGCCCGATCTATTTGGTTATTT 59.451 34.615 0.00 0.00 0.00 1.40
3291 3620 4.336433 CCTACAGCACAAGGGAAACATATG 59.664 45.833 0.00 0.00 0.00 1.78
3336 3665 5.424757 AGTGCGCCAATAACTACTGATTAA 58.575 37.500 4.18 0.00 0.00 1.40
3411 3740 7.540745 TCAACTCGAAAAGGAAAACAAGAAAAG 59.459 33.333 0.00 0.00 0.00 2.27
3966 4346 0.741221 GCCTCTTTCTGCCGTACTGG 60.741 60.000 0.00 0.00 42.50 4.00
4074 4454 5.441718 TTCATCCAGTGCTTCCTAAGATT 57.558 39.130 0.00 0.00 0.00 2.40
4388 4768 1.604593 AAGGATTGCAGCGCCAGTT 60.605 52.632 2.29 0.00 0.00 3.16
4514 4894 3.447586 CCTCTGGAGATTTTGGTAGACGA 59.552 47.826 0.00 0.00 0.00 4.20
4586 4966 1.661463 TTCCACCAGCATCTTCCTCT 58.339 50.000 0.00 0.00 0.00 3.69
4610 4990 0.548682 AGTGGATGCCCTGAGAGGTT 60.549 55.000 0.00 0.00 31.93 3.50
4658 5038 0.470341 GCTTACCCACATCCCTCTCC 59.530 60.000 0.00 0.00 0.00 3.71
5014 5400 2.862536 CTGTAGGATGCACAGAATGACG 59.137 50.000 9.98 0.00 45.10 4.35
5088 5476 9.393786 ACTATACTACAATTAGGTCCCAATCAT 57.606 33.333 0.00 0.00 0.00 2.45
5154 5713 2.674380 CCCTGGTTGCAGCACTCC 60.674 66.667 2.05 1.17 0.00 3.85
5215 5774 5.838529 ACAACAAAACCTAAAAATCCGAGG 58.161 37.500 0.00 0.00 36.36 4.63
5457 6022 5.467035 TCATCAATTCAAACCCCACTTTC 57.533 39.130 0.00 0.00 0.00 2.62
5555 6122 7.363268 GGAGGATCTTTCATAACTTTGTGCATT 60.363 37.037 0.00 0.00 33.73 3.56
5565 6132 7.368198 AGGACTAAGGAGGATCTTTCATAAC 57.632 40.000 0.00 0.00 35.40 1.89
5575 6142 5.959583 AATTTTCGAGGACTAAGGAGGAT 57.040 39.130 0.00 0.00 0.00 3.24
5577 6144 5.488341 TCAAATTTTCGAGGACTAAGGAGG 58.512 41.667 0.00 0.00 0.00 4.30
5611 6178 0.611714 TCAGAAAGTAACCGCTCCCC 59.388 55.000 0.00 0.00 0.00 4.81
5615 6182 5.615925 ATTCCTATCAGAAAGTAACCGCT 57.384 39.130 0.00 0.00 0.00 5.52
5628 6195 7.799081 AGCATTGCAGCTATATATTCCTATCA 58.201 34.615 11.91 0.00 44.50 2.15
5651 6218 4.732784 TGCCGATAACATCTTTGAAAAGC 58.267 39.130 0.00 0.00 35.99 3.51
5652 6219 5.942872 ACTGCCGATAACATCTTTGAAAAG 58.057 37.500 0.00 0.00 37.36 2.27
5695 6267 6.206498 AGACGAAAGCAAATGTCCTTTTTAC 58.794 36.000 0.00 0.00 31.85 2.01
5696 6268 6.385649 AGACGAAAGCAAATGTCCTTTTTA 57.614 33.333 0.00 0.00 31.85 1.52
5697 6269 5.262588 AGACGAAAGCAAATGTCCTTTTT 57.737 34.783 0.00 0.00 31.85 1.94
5703 6275 3.748568 AGAAGGAGACGAAAGCAAATGTC 59.251 43.478 0.00 0.00 0.00 3.06
5706 6278 2.485814 GCAGAAGGAGACGAAAGCAAAT 59.514 45.455 0.00 0.00 0.00 2.32
5707 6279 1.873591 GCAGAAGGAGACGAAAGCAAA 59.126 47.619 0.00 0.00 0.00 3.68
5708 6280 1.070758 AGCAGAAGGAGACGAAAGCAA 59.929 47.619 0.00 0.00 0.00 3.91
5710 6282 1.074752 CAGCAGAAGGAGACGAAAGC 58.925 55.000 0.00 0.00 0.00 3.51
5711 6283 2.732412 TCAGCAGAAGGAGACGAAAG 57.268 50.000 0.00 0.00 0.00 2.62
5712 6284 3.032017 CTTCAGCAGAAGGAGACGAAA 57.968 47.619 10.85 0.00 46.01 3.46
5740 6312 3.342377 TGGAAACGAATCAGGCATACA 57.658 42.857 0.00 0.00 0.00 2.29
5741 6313 3.627577 ACATGGAAACGAATCAGGCATAC 59.372 43.478 0.00 0.00 0.00 2.39
5742 6314 3.876914 GACATGGAAACGAATCAGGCATA 59.123 43.478 0.00 0.00 0.00 3.14
5743 6315 2.684881 GACATGGAAACGAATCAGGCAT 59.315 45.455 0.00 0.00 0.00 4.40
5744 6316 2.083774 GACATGGAAACGAATCAGGCA 58.916 47.619 0.00 0.00 0.00 4.75
5746 6318 4.455533 TCAAAGACATGGAAACGAATCAGG 59.544 41.667 0.00 0.00 0.00 3.86
5748 6320 4.819088 TGTCAAAGACATGGAAACGAATCA 59.181 37.500 0.00 0.00 37.67 2.57
5749 6321 5.356882 TGTCAAAGACATGGAAACGAATC 57.643 39.130 0.00 0.00 37.67 2.52
5775 6347 0.463620 TGGGTTTTTGGAGCACAAGC 59.536 50.000 0.00 0.00 40.82 4.01
5776 6348 1.535860 CGTGGGTTTTTGGAGCACAAG 60.536 52.381 0.00 0.00 40.82 3.16
5777 6349 0.457851 CGTGGGTTTTTGGAGCACAA 59.542 50.000 0.00 0.00 37.28 3.33
5778 6350 0.394488 TCGTGGGTTTTTGGAGCACA 60.394 50.000 0.00 0.00 0.00 4.57
5794 6368 0.969149 TTCTCATGGAGCACTGTCGT 59.031 50.000 0.00 0.00 0.00 4.34
5810 6384 6.485984 GGAATCTGAGCAATGATATGTGTTCT 59.514 38.462 0.00 0.00 0.00 3.01
5811 6385 6.261603 TGGAATCTGAGCAATGATATGTGTTC 59.738 38.462 0.00 0.00 0.00 3.18
5813 6387 5.687780 TGGAATCTGAGCAATGATATGTGT 58.312 37.500 0.00 0.00 0.00 3.72
5820 6394 7.280876 GTGTACTATTTGGAATCTGAGCAATGA 59.719 37.037 0.00 0.00 0.00 2.57
5825 6399 4.508124 CGGTGTACTATTTGGAATCTGAGC 59.492 45.833 0.00 0.00 0.00 4.26
5848 6422 1.210155 CTGCCGCTGCCTTGTTTAC 59.790 57.895 0.00 0.00 36.33 2.01
5853 6427 4.712425 GTTGCTGCCGCTGCCTTG 62.712 66.667 18.38 0.00 36.33 3.61
5864 6438 3.928375 GCTTCAAATATGGTTGGTTGCTG 59.072 43.478 0.00 0.00 0.00 4.41
5916 6490 0.100325 TTTGCGTCAGTTGGCTGTTG 59.900 50.000 0.00 0.00 43.05 3.33
5917 6491 0.814457 TTTTGCGTCAGTTGGCTGTT 59.186 45.000 0.00 0.00 43.05 3.16
5918 6492 1.001378 GATTTTGCGTCAGTTGGCTGT 60.001 47.619 0.00 0.00 43.05 4.40
5919 6493 1.001487 TGATTTTGCGTCAGTTGGCTG 60.001 47.619 0.00 0.00 43.87 4.85
5920 6494 1.267806 CTGATTTTGCGTCAGTTGGCT 59.732 47.619 0.00 0.00 38.58 4.75
5921 6495 1.266718 TCTGATTTTGCGTCAGTTGGC 59.733 47.619 3.39 0.00 42.82 4.52
5922 6496 2.666619 GCTCTGATTTTGCGTCAGTTGG 60.667 50.000 3.39 0.00 42.82 3.77
5923 6497 2.031769 TGCTCTGATTTTGCGTCAGTTG 60.032 45.455 3.39 0.50 42.82 3.16
5924 6498 2.221169 TGCTCTGATTTTGCGTCAGTT 58.779 42.857 3.39 0.00 42.82 3.16
5925 6499 1.802960 CTGCTCTGATTTTGCGTCAGT 59.197 47.619 3.39 0.00 42.82 3.41
5926 6500 1.129998 CCTGCTCTGATTTTGCGTCAG 59.870 52.381 0.00 0.00 43.46 3.51
5927 6501 1.159285 CCTGCTCTGATTTTGCGTCA 58.841 50.000 0.00 0.00 0.00 4.35
5928 6502 1.396301 CTCCTGCTCTGATTTTGCGTC 59.604 52.381 0.00 0.00 0.00 5.19
5929 6503 1.446907 CTCCTGCTCTGATTTTGCGT 58.553 50.000 0.00 0.00 0.00 5.24
5930 6504 0.098376 GCTCCTGCTCTGATTTTGCG 59.902 55.000 0.00 0.00 36.03 4.85
5931 6505 1.135460 GTGCTCCTGCTCTGATTTTGC 60.135 52.381 0.00 0.00 40.48 3.68
5932 6506 2.419324 GAGTGCTCCTGCTCTGATTTTG 59.581 50.000 0.00 0.00 42.27 2.44
5933 6507 2.039480 TGAGTGCTCCTGCTCTGATTTT 59.961 45.455 0.00 0.00 42.27 1.82
5934 6508 1.627329 TGAGTGCTCCTGCTCTGATTT 59.373 47.619 0.00 0.00 42.27 2.17
5935 6509 1.273759 TGAGTGCTCCTGCTCTGATT 58.726 50.000 0.00 0.00 42.27 2.57
5936 6510 1.273759 TTGAGTGCTCCTGCTCTGAT 58.726 50.000 0.00 0.00 42.27 2.90
5937 6511 1.001746 CTTTGAGTGCTCCTGCTCTGA 59.998 52.381 0.00 0.00 42.27 3.27
5938 6512 1.001746 TCTTTGAGTGCTCCTGCTCTG 59.998 52.381 0.00 0.00 42.27 3.35
5939 6513 1.346062 TCTTTGAGTGCTCCTGCTCT 58.654 50.000 0.00 0.00 44.51 4.09
5940 6514 2.399916 ATCTTTGAGTGCTCCTGCTC 57.600 50.000 0.00 0.00 40.48 4.26
5941 6515 2.875094 AATCTTTGAGTGCTCCTGCT 57.125 45.000 0.00 0.00 40.48 4.24
5942 6516 2.159599 CGAAATCTTTGAGTGCTCCTGC 60.160 50.000 0.00 0.00 40.20 4.85
5943 6517 2.417933 CCGAAATCTTTGAGTGCTCCTG 59.582 50.000 0.00 0.00 0.00 3.86
5944 6518 2.704572 CCGAAATCTTTGAGTGCTCCT 58.295 47.619 0.00 0.00 0.00 3.69
5945 6519 1.131315 GCCGAAATCTTTGAGTGCTCC 59.869 52.381 0.00 0.00 0.00 4.70
5946 6520 1.806542 TGCCGAAATCTTTGAGTGCTC 59.193 47.619 0.00 0.00 0.00 4.26
5947 6521 1.808945 CTGCCGAAATCTTTGAGTGCT 59.191 47.619 0.00 0.00 0.00 4.40
5948 6522 1.730446 GCTGCCGAAATCTTTGAGTGC 60.730 52.381 0.00 0.00 0.00 4.40
5949 6523 1.464687 CGCTGCCGAAATCTTTGAGTG 60.465 52.381 0.00 0.00 36.29 3.51
5950 6524 0.798776 CGCTGCCGAAATCTTTGAGT 59.201 50.000 0.00 0.00 36.29 3.41
5951 6525 0.522076 GCGCTGCCGAAATCTTTGAG 60.522 55.000 0.00 0.00 36.29 3.02
5952 6526 0.955428 AGCGCTGCCGAAATCTTTGA 60.955 50.000 10.39 0.00 36.29 2.69
5953 6527 0.795735 CAGCGCTGCCGAAATCTTTG 60.796 55.000 26.68 0.00 36.29 2.77
5954 6528 1.503542 CAGCGCTGCCGAAATCTTT 59.496 52.632 26.68 0.00 36.29 2.52
5955 6529 3.181367 CAGCGCTGCCGAAATCTT 58.819 55.556 26.68 0.00 36.29 2.40
5965 6539 0.525455 TCGTGTGTATAGCAGCGCTG 60.525 55.000 32.83 32.83 40.10 5.18
5966 6540 0.385751 ATCGTGTGTATAGCAGCGCT 59.614 50.000 2.64 2.64 43.41 5.92
5967 6541 0.504384 CATCGTGTGTATAGCAGCGC 59.496 55.000 0.00 0.00 0.00 5.92
5968 6542 2.047040 CTCATCGTGTGTATAGCAGCG 58.953 52.381 0.00 0.00 0.00 5.18
5969 6543 1.789464 GCTCATCGTGTGTATAGCAGC 59.211 52.381 0.00 0.00 0.00 5.25
5970 6544 2.047040 CGCTCATCGTGTGTATAGCAG 58.953 52.381 0.00 0.00 0.00 4.24
5971 6545 1.269051 CCGCTCATCGTGTGTATAGCA 60.269 52.381 0.00 0.00 36.19 3.49
5972 6546 1.269102 ACCGCTCATCGTGTGTATAGC 60.269 52.381 0.00 0.00 36.19 2.97
5973 6547 2.385315 CACCGCTCATCGTGTGTATAG 58.615 52.381 0.00 0.00 35.83 1.31
5974 6548 1.066454 CCACCGCTCATCGTGTGTATA 59.934 52.381 0.00 0.00 37.53 1.47
5975 6549 0.179111 CCACCGCTCATCGTGTGTAT 60.179 55.000 0.00 0.00 37.53 2.29
5976 6550 1.214325 CCACCGCTCATCGTGTGTA 59.786 57.895 0.00 0.00 37.53 2.90
5977 6551 2.048222 CCACCGCTCATCGTGTGT 60.048 61.111 0.00 0.00 37.53 3.72
5978 6552 2.094659 GTCCACCGCTCATCGTGTG 61.095 63.158 0.00 0.00 38.34 3.82
5979 6553 2.261671 GTCCACCGCTCATCGTGT 59.738 61.111 0.00 0.00 36.19 4.49
5980 6554 2.613739 ATCGTCCACCGCTCATCGTG 62.614 60.000 0.00 0.00 36.19 4.35
5981 6555 1.099295 TATCGTCCACCGCTCATCGT 61.099 55.000 0.00 0.00 36.19 3.73
5982 6556 0.241213 ATATCGTCCACCGCTCATCG 59.759 55.000 0.00 0.00 36.19 3.84
5983 6557 1.000163 ACATATCGTCCACCGCTCATC 60.000 52.381 0.00 0.00 36.19 2.92
5984 6558 1.040646 ACATATCGTCCACCGCTCAT 58.959 50.000 0.00 0.00 36.19 2.90
5985 6559 0.102300 CACATATCGTCCACCGCTCA 59.898 55.000 0.00 0.00 36.19 4.26
5986 6560 0.384309 TCACATATCGTCCACCGCTC 59.616 55.000 0.00 0.00 36.19 5.03
5987 6561 0.821517 TTCACATATCGTCCACCGCT 59.178 50.000 0.00 0.00 36.19 5.52
5988 6562 0.928229 GTTCACATATCGTCCACCGC 59.072 55.000 0.00 0.00 36.19 5.68
5989 6563 1.197055 CGTTCACATATCGTCCACCG 58.803 55.000 0.00 0.00 38.13 4.94
5990 6564 2.190981 GTCGTTCACATATCGTCCACC 58.809 52.381 0.00 0.00 0.00 4.61
5991 6565 2.871133 TGTCGTTCACATATCGTCCAC 58.129 47.619 0.00 0.00 0.00 4.02
5992 6566 3.579335 TTGTCGTTCACATATCGTCCA 57.421 42.857 0.00 0.00 33.90 4.02
5993 6567 3.302480 GCATTGTCGTTCACATATCGTCC 60.302 47.826 0.00 0.00 33.90 4.79
5994 6568 3.305897 TGCATTGTCGTTCACATATCGTC 59.694 43.478 0.00 0.00 33.90 4.20
5995 6569 3.258228 TGCATTGTCGTTCACATATCGT 58.742 40.909 0.00 0.00 33.90 3.73
5996 6570 3.551485 TCTGCATTGTCGTTCACATATCG 59.449 43.478 0.00 0.00 33.90 2.92
5997 6571 5.234972 TGATCTGCATTGTCGTTCACATATC 59.765 40.000 0.00 0.00 33.90 1.63
5998 6572 5.118286 TGATCTGCATTGTCGTTCACATAT 58.882 37.500 0.00 0.00 33.90 1.78
5999 6573 4.502962 TGATCTGCATTGTCGTTCACATA 58.497 39.130 0.00 0.00 33.90 2.29
6000 6574 3.337358 TGATCTGCATTGTCGTTCACAT 58.663 40.909 0.00 0.00 33.90 3.21
6001 6575 2.738314 CTGATCTGCATTGTCGTTCACA 59.262 45.455 0.00 0.00 0.00 3.58
6002 6576 2.475187 GCTGATCTGCATTGTCGTTCAC 60.475 50.000 18.67 0.00 0.00 3.18
6003 6577 1.733912 GCTGATCTGCATTGTCGTTCA 59.266 47.619 18.67 0.00 0.00 3.18
6004 6578 2.005451 AGCTGATCTGCATTGTCGTTC 58.995 47.619 24.33 0.00 34.99 3.95
6005 6579 2.005451 GAGCTGATCTGCATTGTCGTT 58.995 47.619 24.33 3.10 34.99 3.85
6006 6580 1.066645 TGAGCTGATCTGCATTGTCGT 60.067 47.619 24.33 3.82 34.99 4.34
6007 6581 1.648504 TGAGCTGATCTGCATTGTCG 58.351 50.000 24.33 0.00 34.99 4.35
6008 6582 2.548904 GGATGAGCTGATCTGCATTGTC 59.451 50.000 24.33 14.22 34.99 3.18
6009 6583 2.092592 TGGATGAGCTGATCTGCATTGT 60.093 45.455 24.33 5.61 34.99 2.71
6010 6584 2.572290 TGGATGAGCTGATCTGCATTG 58.428 47.619 24.33 0.00 34.99 2.82
6011 6585 3.149981 CATGGATGAGCTGATCTGCATT 58.850 45.455 24.33 9.93 34.99 3.56
6012 6586 2.784347 CATGGATGAGCTGATCTGCAT 58.216 47.619 24.33 11.55 34.99 3.96
6013 6587 1.814248 GCATGGATGAGCTGATCTGCA 60.814 52.381 24.33 8.21 34.99 4.41
6014 6588 0.875728 GCATGGATGAGCTGATCTGC 59.124 55.000 16.18 16.18 0.00 4.26
6015 6589 1.874231 GTGCATGGATGAGCTGATCTG 59.126 52.381 13.10 5.65 0.00 2.90
6016 6590 1.489230 TGTGCATGGATGAGCTGATCT 59.511 47.619 13.10 0.00 0.00 2.75
6017 6591 1.963172 TGTGCATGGATGAGCTGATC 58.037 50.000 4.34 4.34 0.00 2.92
6018 6592 2.430248 TTGTGCATGGATGAGCTGAT 57.570 45.000 0.00 0.00 0.00 2.90
6019 6593 2.203470 TTTGTGCATGGATGAGCTGA 57.797 45.000 0.00 0.00 0.00 4.26
6020 6594 2.230508 AGTTTTGTGCATGGATGAGCTG 59.769 45.455 0.00 0.00 0.00 4.24
6021 6595 2.230508 CAGTTTTGTGCATGGATGAGCT 59.769 45.455 0.00 0.00 0.00 4.09
6022 6596 2.229543 TCAGTTTTGTGCATGGATGAGC 59.770 45.455 0.00 0.00 0.00 4.26
6023 6597 4.022589 ACTTCAGTTTTGTGCATGGATGAG 60.023 41.667 0.00 0.00 0.00 2.90
6024 6598 3.890756 ACTTCAGTTTTGTGCATGGATGA 59.109 39.130 0.00 0.00 0.00 2.92
6025 6599 3.985279 CACTTCAGTTTTGTGCATGGATG 59.015 43.478 0.00 0.00 0.00 3.51
6026 6600 3.890756 TCACTTCAGTTTTGTGCATGGAT 59.109 39.130 0.00 0.00 0.00 3.41
6027 6601 3.286353 TCACTTCAGTTTTGTGCATGGA 58.714 40.909 0.00 0.00 0.00 3.41
6028 6602 3.713858 TCACTTCAGTTTTGTGCATGG 57.286 42.857 0.00 0.00 0.00 3.66
6029 6603 7.113965 GTCTATTTCACTTCAGTTTTGTGCATG 59.886 37.037 0.00 0.00 0.00 4.06
6030 6604 7.141363 GTCTATTTCACTTCAGTTTTGTGCAT 58.859 34.615 0.00 0.00 0.00 3.96
6031 6605 6.494842 GTCTATTTCACTTCAGTTTTGTGCA 58.505 36.000 0.00 0.00 0.00 4.57
6032 6606 5.621228 CGTCTATTTCACTTCAGTTTTGTGC 59.379 40.000 0.00 0.00 0.00 4.57
6033 6607 6.136071 CCGTCTATTTCACTTCAGTTTTGTG 58.864 40.000 0.00 0.00 0.00 3.33
6034 6608 5.277828 GCCGTCTATTTCACTTCAGTTTTGT 60.278 40.000 0.00 0.00 0.00 2.83
6035 6609 5.049405 AGCCGTCTATTTCACTTCAGTTTTG 60.049 40.000 0.00 0.00 0.00 2.44
6036 6610 5.049405 CAGCCGTCTATTTCACTTCAGTTTT 60.049 40.000 0.00 0.00 0.00 2.43
6037 6611 4.452455 CAGCCGTCTATTTCACTTCAGTTT 59.548 41.667 0.00 0.00 0.00 2.66
6038 6612 3.997021 CAGCCGTCTATTTCACTTCAGTT 59.003 43.478 0.00 0.00 0.00 3.16
6039 6613 3.589988 CAGCCGTCTATTTCACTTCAGT 58.410 45.455 0.00 0.00 0.00 3.41
6040 6614 2.932614 CCAGCCGTCTATTTCACTTCAG 59.067 50.000 0.00 0.00 0.00 3.02
6041 6615 2.565391 TCCAGCCGTCTATTTCACTTCA 59.435 45.455 0.00 0.00 0.00 3.02
6042 6616 3.247006 TCCAGCCGTCTATTTCACTTC 57.753 47.619 0.00 0.00 0.00 3.01
6043 6617 3.914426 ATCCAGCCGTCTATTTCACTT 57.086 42.857 0.00 0.00 0.00 3.16
6044 6618 3.914426 AATCCAGCCGTCTATTTCACT 57.086 42.857 0.00 0.00 0.00 3.41
6045 6619 3.065371 CCAAATCCAGCCGTCTATTTCAC 59.935 47.826 0.00 0.00 0.00 3.18
6046 6620 3.278574 CCAAATCCAGCCGTCTATTTCA 58.721 45.455 0.00 0.00 0.00 2.69
6047 6621 2.033424 GCCAAATCCAGCCGTCTATTTC 59.967 50.000 0.00 0.00 0.00 2.17
6048 6622 2.024414 GCCAAATCCAGCCGTCTATTT 58.976 47.619 0.00 0.00 0.00 1.40
6049 6623 1.212935 AGCCAAATCCAGCCGTCTATT 59.787 47.619 0.00 0.00 0.00 1.73
6050 6624 0.839946 AGCCAAATCCAGCCGTCTAT 59.160 50.000 0.00 0.00 0.00 1.98
6051 6625 0.107703 CAGCCAAATCCAGCCGTCTA 60.108 55.000 0.00 0.00 0.00 2.59
6052 6626 1.377725 CAGCCAAATCCAGCCGTCT 60.378 57.895 0.00 0.00 0.00 4.18
6053 6627 1.648467 GACAGCCAAATCCAGCCGTC 61.648 60.000 0.00 0.00 29.96 4.79
6054 6628 1.675641 GACAGCCAAATCCAGCCGT 60.676 57.895 0.00 0.00 0.00 5.68
6055 6629 2.753966 CGACAGCCAAATCCAGCCG 61.754 63.158 0.00 0.00 0.00 5.52
6056 6630 1.244019 AACGACAGCCAAATCCAGCC 61.244 55.000 0.00 0.00 0.00 4.85
6057 6631 0.169009 GAACGACAGCCAAATCCAGC 59.831 55.000 0.00 0.00 0.00 4.85
6058 6632 0.804989 GGAACGACAGCCAAATCCAG 59.195 55.000 0.00 0.00 0.00 3.86
6059 6633 0.608035 GGGAACGACAGCCAAATCCA 60.608 55.000 0.00 0.00 0.00 3.41
6060 6634 2.180674 GGGAACGACAGCCAAATCC 58.819 57.895 0.00 0.00 0.00 3.01
6073 6647 3.041940 CCTGCACGACACGGGAAC 61.042 66.667 0.00 0.00 35.38 3.62
6074 6648 4.308458 CCCTGCACGACACGGGAA 62.308 66.667 0.00 0.00 38.39 3.97
6077 6651 3.991051 AGTCCCTGCACGACACGG 61.991 66.667 10.90 0.00 32.41 4.94
6078 6652 2.734723 CAGTCCCTGCACGACACG 60.735 66.667 10.90 0.00 32.41 4.49
6079 6653 1.664965 GACAGTCCCTGCACGACAC 60.665 63.158 10.90 0.61 34.37 3.67
6080 6654 2.734591 GACAGTCCCTGCACGACA 59.265 61.111 10.90 0.00 34.37 4.35
6081 6655 2.430921 CGACAGTCCCTGCACGAC 60.431 66.667 0.00 1.59 36.99 4.34
6082 6656 2.910479 ACGACAGTCCCTGCACGA 60.910 61.111 14.74 0.00 37.73 4.35
6083 6657 2.430921 GACGACAGTCCCTGCACG 60.431 66.667 0.00 8.91 41.41 5.34
6092 6666 5.871524 TCGAAACTACTATACAGACGACAGT 59.128 40.000 0.00 0.00 0.00 3.55
6093 6667 6.341880 TCGAAACTACTATACAGACGACAG 57.658 41.667 0.00 0.00 0.00 3.51
6094 6668 6.591448 TCTTCGAAACTACTATACAGACGACA 59.409 38.462 0.00 0.00 0.00 4.35
6095 6669 6.998338 TCTTCGAAACTACTATACAGACGAC 58.002 40.000 0.00 0.00 0.00 4.34
6096 6670 7.783090 ATCTTCGAAACTACTATACAGACGA 57.217 36.000 0.00 0.00 0.00 4.20
6097 6671 8.838452 AAATCTTCGAAACTACTATACAGACG 57.162 34.615 0.00 0.00 0.00 4.18
6098 6672 9.784680 TGAAATCTTCGAAACTACTATACAGAC 57.215 33.333 0.00 0.00 0.00 3.51
6100 6674 9.790389 ACTGAAATCTTCGAAACTACTATACAG 57.210 33.333 0.00 0.00 0.00 2.74
6101 6675 9.784680 GACTGAAATCTTCGAAACTACTATACA 57.215 33.333 0.00 0.00 0.00 2.29
6102 6676 9.784680 TGACTGAAATCTTCGAAACTACTATAC 57.215 33.333 0.00 0.00 0.00 1.47
6104 6678 8.740906 TCTGACTGAAATCTTCGAAACTACTAT 58.259 33.333 0.00 0.00 0.00 2.12
6105 6679 8.107399 TCTGACTGAAATCTTCGAAACTACTA 57.893 34.615 0.00 0.00 0.00 1.82
6106 6680 6.982852 TCTGACTGAAATCTTCGAAACTACT 58.017 36.000 0.00 0.00 0.00 2.57
6107 6681 7.542477 TGATCTGACTGAAATCTTCGAAACTAC 59.458 37.037 0.00 0.00 0.00 2.73
6108 6682 7.542477 GTGATCTGACTGAAATCTTCGAAACTA 59.458 37.037 0.00 0.00 0.00 2.24
6109 6683 6.367422 GTGATCTGACTGAAATCTTCGAAACT 59.633 38.462 0.00 0.00 0.00 2.66
6110 6684 6.367422 AGTGATCTGACTGAAATCTTCGAAAC 59.633 38.462 0.00 0.00 0.00 2.78
6111 6685 6.459066 AGTGATCTGACTGAAATCTTCGAAA 58.541 36.000 0.00 0.00 0.00 3.46
6112 6686 6.030548 AGTGATCTGACTGAAATCTTCGAA 57.969 37.500 0.00 0.00 0.00 3.71
6113 6687 5.651387 AGTGATCTGACTGAAATCTTCGA 57.349 39.130 0.00 0.00 0.00 3.71
6114 6688 6.183360 GGAAAGTGATCTGACTGAAATCTTCG 60.183 42.308 0.00 0.00 0.00 3.79
6115 6689 6.652481 TGGAAAGTGATCTGACTGAAATCTTC 59.348 38.462 0.00 0.00 0.00 2.87
6116 6690 6.537355 TGGAAAGTGATCTGACTGAAATCTT 58.463 36.000 0.00 0.00 0.00 2.40
6117 6691 6.119240 TGGAAAGTGATCTGACTGAAATCT 57.881 37.500 0.00 0.00 0.00 2.40
6118 6692 6.808008 TTGGAAAGTGATCTGACTGAAATC 57.192 37.500 0.00 0.00 0.00 2.17
6119 6693 6.774656 AGTTTGGAAAGTGATCTGACTGAAAT 59.225 34.615 0.00 0.00 0.00 2.17
6120 6694 6.122277 AGTTTGGAAAGTGATCTGACTGAAA 58.878 36.000 0.00 0.00 0.00 2.69
6121 6695 5.684704 AGTTTGGAAAGTGATCTGACTGAA 58.315 37.500 0.00 0.00 0.00 3.02
6122 6696 5.296151 AGTTTGGAAAGTGATCTGACTGA 57.704 39.130 0.00 0.00 0.00 3.41
6123 6697 6.348050 GCTAAGTTTGGAAAGTGATCTGACTG 60.348 42.308 0.00 0.00 0.00 3.51
6124 6698 5.703130 GCTAAGTTTGGAAAGTGATCTGACT 59.297 40.000 0.00 0.00 0.00 3.41
6125 6699 5.389935 CGCTAAGTTTGGAAAGTGATCTGAC 60.390 44.000 0.00 0.00 0.00 3.51
6126 6700 4.690748 CGCTAAGTTTGGAAAGTGATCTGA 59.309 41.667 0.00 0.00 0.00 3.27
6127 6701 4.452455 ACGCTAAGTTTGGAAAGTGATCTG 59.548 41.667 0.00 0.00 0.00 2.90
6128 6702 4.642429 ACGCTAAGTTTGGAAAGTGATCT 58.358 39.130 0.00 0.00 0.00 2.75
6129 6703 4.142881 GGACGCTAAGTTTGGAAAGTGATC 60.143 45.833 0.00 0.00 0.00 2.92
6130 6704 3.751698 GGACGCTAAGTTTGGAAAGTGAT 59.248 43.478 0.00 0.00 0.00 3.06
6131 6705 3.135994 GGACGCTAAGTTTGGAAAGTGA 58.864 45.455 0.00 0.00 0.00 3.41
6132 6706 3.139077 AGGACGCTAAGTTTGGAAAGTG 58.861 45.455 0.00 0.00 0.00 3.16
6133 6707 3.487120 AGGACGCTAAGTTTGGAAAGT 57.513 42.857 0.00 0.00 0.00 2.66
6134 6708 4.537015 CAAAGGACGCTAAGTTTGGAAAG 58.463 43.478 0.00 0.00 0.00 2.62
6135 6709 3.243267 GCAAAGGACGCTAAGTTTGGAAA 60.243 43.478 0.00 0.00 31.77 3.13
6136 6710 2.292292 GCAAAGGACGCTAAGTTTGGAA 59.708 45.455 0.00 0.00 31.77 3.53
6137 6711 1.877443 GCAAAGGACGCTAAGTTTGGA 59.123 47.619 0.00 0.00 31.77 3.53
6138 6712 1.606668 TGCAAAGGACGCTAAGTTTGG 59.393 47.619 0.00 0.00 31.77 3.28
6139 6713 3.347958 TTGCAAAGGACGCTAAGTTTG 57.652 42.857 0.00 0.00 33.81 2.93
6140 6714 3.964909 CTTTGCAAAGGACGCTAAGTTT 58.035 40.909 28.12 0.00 37.42 2.66
6141 6715 3.626028 CTTTGCAAAGGACGCTAAGTT 57.374 42.857 28.12 0.00 37.42 2.66
6142 6716 2.572290 ACTTTGCAAAGGACGCTAAGT 58.428 42.857 35.65 15.23 46.03 2.24
6143 6717 2.548057 TGACTTTGCAAAGGACGCTAAG 59.452 45.455 35.65 14.61 44.42 2.18
6144 6718 2.289547 GTGACTTTGCAAAGGACGCTAA 59.710 45.455 35.65 11.31 40.31 3.09
6145 6719 1.871039 GTGACTTTGCAAAGGACGCTA 59.129 47.619 35.65 16.50 40.31 4.26
6146 6720 0.663153 GTGACTTTGCAAAGGACGCT 59.337 50.000 35.65 19.39 40.31 5.07
6147 6721 0.380378 TGTGACTTTGCAAAGGACGC 59.620 50.000 35.65 31.51 40.31 5.19
6148 6722 1.002468 CCTGTGACTTTGCAAAGGACG 60.002 52.381 35.65 25.10 44.64 4.79
6149 6723 2.024414 ACCTGTGACTTTGCAAAGGAC 58.976 47.619 35.65 30.09 44.64 3.85
6150 6724 2.023673 CACCTGTGACTTTGCAAAGGA 58.976 47.619 35.65 22.56 44.64 3.36
6151 6725 1.067516 CCACCTGTGACTTTGCAAAGG 59.932 52.381 35.65 23.71 46.77 3.11
6152 6726 1.536709 GCCACCTGTGACTTTGCAAAG 60.537 52.381 32.53 32.53 41.73 2.77
6153 6727 0.459489 GCCACCTGTGACTTTGCAAA 59.541 50.000 12.14 12.14 0.00 3.68
6154 6728 1.723608 CGCCACCTGTGACTTTGCAA 61.724 55.000 0.00 0.00 0.00 4.08
6155 6729 2.186160 CGCCACCTGTGACTTTGCA 61.186 57.895 0.00 0.00 0.00 4.08
6156 6730 2.639286 CGCCACCTGTGACTTTGC 59.361 61.111 0.00 0.00 0.00 3.68
6157 6731 2.639286 GCGCCACCTGTGACTTTG 59.361 61.111 0.00 0.00 0.00 2.77
6158 6732 2.594592 GGCGCCACCTGTGACTTT 60.595 61.111 24.80 0.00 34.51 2.66
6159 6733 4.988598 CGGCGCCACCTGTGACTT 62.989 66.667 28.98 0.00 35.61 3.01
6175 6749 3.737172 CAACAAGGAAGGGCGGCG 61.737 66.667 0.51 0.51 0.00 6.46
6176 6750 3.373565 CCAACAAGGAAGGGCGGC 61.374 66.667 0.00 0.00 41.22 6.53
6177 6751 3.373565 GCCAACAAGGAAGGGCGG 61.374 66.667 0.00 0.00 41.22 6.13
6179 6753 2.997315 GGGCCAACAAGGAAGGGC 60.997 66.667 4.39 0.00 46.34 5.19
6180 6754 2.283894 GGGGCCAACAAGGAAGGG 60.284 66.667 4.39 0.00 41.22 3.95
6181 6755 2.283894 GGGGGCCAACAAGGAAGG 60.284 66.667 4.39 0.00 41.22 3.46
6182 6756 1.607467 CTGGGGGCCAACAAGGAAG 60.607 63.158 4.39 0.00 41.22 3.46
6183 6757 2.525592 CTGGGGGCCAACAAGGAA 59.474 61.111 4.39 0.00 41.22 3.36
6184 6758 4.299796 GCTGGGGGCCAACAAGGA 62.300 66.667 4.39 0.00 41.22 3.36
6185 6759 4.305956 AGCTGGGGGCCAACAAGG 62.306 66.667 4.39 0.00 43.05 3.61
6186 6760 2.677875 GAGCTGGGGGCCAACAAG 60.678 66.667 4.39 0.00 43.05 3.16
6187 6761 4.659172 CGAGCTGGGGGCCAACAA 62.659 66.667 4.39 0.00 43.05 2.83
6195 6769 3.406595 CTTAAGGGGCGAGCTGGGG 62.407 68.421 0.00 0.00 0.00 4.96
6196 6770 2.190578 CTTAAGGGGCGAGCTGGG 59.809 66.667 0.00 0.00 0.00 4.45
6197 6771 1.450312 CACTTAAGGGGCGAGCTGG 60.450 63.158 7.53 0.00 0.00 4.85
6198 6772 1.450312 CCACTTAAGGGGCGAGCTG 60.450 63.158 11.75 0.00 0.00 4.24
6199 6773 2.670148 CCCACTTAAGGGGCGAGCT 61.670 63.158 19.15 0.00 45.60 4.09
6200 6774 2.124695 CCCACTTAAGGGGCGAGC 60.125 66.667 19.15 0.00 45.60 5.03
6207 6781 1.305930 GGTTGAGCGCCCACTTAAGG 61.306 60.000 2.29 0.00 0.00 2.69
6208 6782 1.635663 CGGTTGAGCGCCCACTTAAG 61.636 60.000 2.29 0.00 0.00 1.85
6209 6783 1.669760 CGGTTGAGCGCCCACTTAA 60.670 57.895 2.29 0.00 0.00 1.85
6210 6784 2.047655 CGGTTGAGCGCCCACTTA 60.048 61.111 2.29 0.00 0.00 2.24
6216 6790 2.894240 TATTCGACCGGTTGAGCGCC 62.894 60.000 23.53 0.51 0.00 6.53
6217 6791 1.517694 TATTCGACCGGTTGAGCGC 60.518 57.895 23.53 0.00 0.00 5.92
6218 6792 1.469126 CGTATTCGACCGGTTGAGCG 61.469 60.000 23.53 22.72 39.71 5.03
6219 6793 0.179156 TCGTATTCGACCGGTTGAGC 60.179 55.000 23.53 16.38 41.35 4.26
6229 6803 2.598589 CGTTTCCTTGGTCGTATTCGA 58.401 47.619 0.00 0.00 44.12 3.71
6230 6804 1.657094 CCGTTTCCTTGGTCGTATTCG 59.343 52.381 0.00 0.00 38.55 3.34
6231 6805 1.395954 GCCGTTTCCTTGGTCGTATTC 59.604 52.381 0.00 0.00 0.00 1.75
6232 6806 1.002773 AGCCGTTTCCTTGGTCGTATT 59.997 47.619 0.00 0.00 0.00 1.89
6233 6807 0.611714 AGCCGTTTCCTTGGTCGTAT 59.388 50.000 0.00 0.00 0.00 3.06
6234 6808 0.320073 CAGCCGTTTCCTTGGTCGTA 60.320 55.000 0.00 0.00 0.00 3.43
6235 6809 1.597027 CAGCCGTTTCCTTGGTCGT 60.597 57.895 0.00 0.00 0.00 4.34
6236 6810 2.325082 CCAGCCGTTTCCTTGGTCG 61.325 63.158 0.00 0.00 0.00 4.79
6237 6811 1.228154 ACCAGCCGTTTCCTTGGTC 60.228 57.895 0.00 0.00 39.68 4.02
6238 6812 1.228154 GACCAGCCGTTTCCTTGGT 60.228 57.895 0.00 0.00 46.14 3.67
6239 6813 2.325082 CGACCAGCCGTTTCCTTGG 61.325 63.158 0.00 0.00 36.76 3.61
6240 6814 2.966309 GCGACCAGCCGTTTCCTTG 61.966 63.158 0.00 0.00 40.81 3.61
6241 6815 2.668550 GCGACCAGCCGTTTCCTT 60.669 61.111 0.00 0.00 40.81 3.36
6262 6836 3.499737 GATGTTGAGCCGCCACCG 61.500 66.667 0.00 0.00 0.00 4.94
6263 6837 3.499737 CGATGTTGAGCCGCCACC 61.500 66.667 0.00 0.00 0.00 4.61
6264 6838 2.434185 TCGATGTTGAGCCGCCAC 60.434 61.111 0.00 0.00 0.00 5.01
6265 6839 2.125552 CTCGATGTTGAGCCGCCA 60.126 61.111 0.00 0.00 0.00 5.69
6266 6840 2.892425 CCTCGATGTTGAGCCGCC 60.892 66.667 0.00 0.00 34.56 6.13
6267 6841 3.567797 GCCTCGATGTTGAGCCGC 61.568 66.667 0.00 0.00 34.56 6.53
6268 6842 3.257561 CGCCTCGATGTTGAGCCG 61.258 66.667 0.00 0.00 34.56 5.52
6269 6843 3.567797 GCGCCTCGATGTTGAGCC 61.568 66.667 0.00 0.00 34.56 4.70
6270 6844 2.510238 AGCGCCTCGATGTTGAGC 60.510 61.111 2.29 0.00 34.56 4.26
6271 6845 3.392431 CAGCGCCTCGATGTTGAG 58.608 61.111 2.29 0.00 38.50 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.