Multiple sequence alignment - TraesCS5A01G317000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G317000 chr5A 100.000 6953 0 0 1 6953 527923372 527916420 0.000000e+00 12840.0
1 TraesCS5A01G317000 chr5A 92.727 110 6 2 1 109 582978969 582979077 2.600000e-34 158.0
2 TraesCS5A01G317000 chr5D 94.090 4416 157 37 1302 5646 415301687 415297305 0.000000e+00 6613.0
3 TraesCS5A01G317000 chr5D 90.909 704 31 16 6277 6953 415296204 415295507 0.000000e+00 915.0
4 TraesCS5A01G317000 chr5D 82.139 907 84 42 396 1269 415302547 415301686 0.000000e+00 706.0
5 TraesCS5A01G317000 chr5D 95.833 144 5 1 5965 6107 415296648 415296505 1.510000e-56 231.0
6 TraesCS5A01G317000 chr5D 86.697 218 12 7 5711 5919 415296949 415296740 7.020000e-55 226.0
7 TraesCS5A01G317000 chr5B 92.986 3479 133 37 1310 4741 501481659 501478245 0.000000e+00 4970.0
8 TraesCS5A01G317000 chr5B 93.161 1082 46 11 4747 5813 501478188 501477120 0.000000e+00 1563.0
9 TraesCS5A01G317000 chr5B 93.003 686 27 6 6277 6953 501476698 501476025 0.000000e+00 981.0
10 TraesCS5A01G317000 chr5B 84.774 972 65 35 311 1249 501482601 501481680 0.000000e+00 898.0
11 TraesCS5A01G317000 chr5B 89.394 132 12 2 5979 6108 501477128 501476997 1.550000e-36 165.0
12 TraesCS5A01G317000 chr5B 88.571 70 5 2 6099 6168 66025477 66025411 1.610000e-11 82.4
13 TraesCS5A01G317000 chr6A 97.000 100 3 0 1 100 604962510 604962411 1.200000e-37 169.0
14 TraesCS5A01G317000 chr6A 96.000 100 4 0 1 100 104307069 104306970 5.580000e-36 163.0
15 TraesCS5A01G317000 chr6A 96.000 100 4 0 1 100 426635696 426635795 5.580000e-36 163.0
16 TraesCS5A01G317000 chr6A 96.000 100 4 0 1 100 613972664 613972763 5.580000e-36 163.0
17 TraesCS5A01G317000 chr6A 88.060 67 4 4 6102 6166 9347328 9347264 7.480000e-10 76.8
18 TraesCS5A01G317000 chr6B 92.982 114 6 2 1 112 580307846 580307959 1.550000e-36 165.0
19 TraesCS5A01G317000 chr1B 96.939 98 3 0 1 98 683445753 683445850 1.550000e-36 165.0
20 TraesCS5A01G317000 chr7D 96.000 100 4 0 1 100 598495454 598495355 5.580000e-36 163.0
21 TraesCS5A01G317000 chr7D 85.333 75 6 5 6101 6171 86389794 86389867 9.670000e-09 73.1
22 TraesCS5A01G317000 chr2D 96.000 100 4 0 1 100 366061231 366061132 5.580000e-36 163.0
23 TraesCS5A01G317000 chr2D 87.692 65 6 2 6106 6168 66821299 66821363 2.690000e-09 75.0
24 TraesCS5A01G317000 chr2D 100.000 29 0 0 6925 6953 19879058 19879086 4.000000e-03 54.7
25 TraesCS5A01G317000 chr4B 89.394 66 2 5 6124 6188 91298356 91298417 2.080000e-10 78.7
26 TraesCS5A01G317000 chr1D 88.235 68 4 3 6104 6167 20994564 20994497 2.080000e-10 78.7
27 TraesCS5A01G317000 chr3D 87.143 70 3 4 6124 6188 278442281 278442213 2.690000e-09 75.0
28 TraesCS5A01G317000 chr3D 85.135 74 5 5 6106 6178 422648397 422648329 3.480000e-08 71.3
29 TraesCS5A01G317000 chr3B 84.416 77 8 4 6124 6198 738697225 738697299 9.670000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G317000 chr5A 527916420 527923372 6952 True 12840.0 12840 100.0000 1 6953 1 chr5A.!!$R1 6952
1 TraesCS5A01G317000 chr5D 415295507 415302547 7040 True 1738.2 6613 89.9336 396 6953 5 chr5D.!!$R1 6557
2 TraesCS5A01G317000 chr5B 501476025 501482601 6576 True 1715.4 4970 90.6636 311 6953 5 chr5B.!!$R2 6642

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
522 525 0.035739 GTAAAGCTCCCCACGGACAA 59.964 55.0 0.0 0.0 33.32 3.18 F
1290 1343 0.034896 TTGGTTGCCTCGTCTCTTCC 59.965 55.0 0.0 0.0 0.00 3.46 F
1750 1855 0.110056 GCACGCTGATTTCTGGTGTG 60.110 55.0 0.0 0.0 42.24 3.82 F
1751 1856 0.110056 CACGCTGATTTCTGGTGTGC 60.110 55.0 0.0 0.0 35.29 4.57 F
2385 2499 0.240411 CTGCTCTTGGTCTGCTTTGC 59.760 55.0 0.0 0.0 0.00 3.68 F
3440 3570 0.247460 AGCTCACTCGCATACTGCAA 59.753 50.0 0.0 0.0 45.36 4.08 F
4838 5020 0.482446 ATCCCAGCCACAGGAAAACA 59.518 50.0 0.0 0.0 35.30 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2398 2512 0.600255 AAGACCCGAAACAGAGCACG 60.600 55.000 0.00 0.00 0.00 5.34 R
2684 2799 0.035915 GGCCTTTGTCCCTCAGAGTC 60.036 60.000 0.00 0.00 0.00 3.36 R
3186 3314 0.606096 TTCCTGCCAGATCGACGAAA 59.394 50.000 0.00 0.00 0.00 3.46 R
3440 3570 0.673644 CGTTGCCTCCCAAAGACGAT 60.674 55.000 0.00 0.00 35.29 3.73 R
4249 4380 1.416030 TGTACTTCCTTGCAGTGCTCA 59.584 47.619 17.60 1.78 0.00 4.26 R
5297 5479 0.246635 GTTGCTTAGAGCTCCGGTCA 59.753 55.000 10.93 0.92 42.97 4.02 R
6106 6804 0.178958 ACTGACTCAACGGAGGGAGT 60.179 55.000 0.00 0.00 46.16 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.747155 TCTCGTTTCCTATTCCTACTCATAG 57.253 40.000 0.00 0.00 0.00 2.23
42 43 9.853555 CTACTCATAGGATTTGAGATACATGTC 57.146 37.037 0.00 0.00 42.63 3.06
43 44 8.255111 ACTCATAGGATTTGAGATACATGTCA 57.745 34.615 0.00 0.00 42.63 3.58
44 45 8.878211 ACTCATAGGATTTGAGATACATGTCAT 58.122 33.333 0.00 0.00 42.63 3.06
45 46 9.368674 CTCATAGGATTTGAGATACATGTCATC 57.631 37.037 0.00 4.47 42.63 2.92
46 47 9.097946 TCATAGGATTTGAGATACATGTCATCT 57.902 33.333 0.00 9.42 35.43 2.90
47 48 9.368674 CATAGGATTTGAGATACATGTCATCTC 57.631 37.037 24.04 24.04 45.76 2.75
56 57 8.984891 GAGATACATGTCATCTCATTTCCTAG 57.015 38.462 24.95 0.00 45.17 3.02
57 58 8.718158 AGATACATGTCATCTCATTTCCTAGA 57.282 34.615 0.00 0.00 0.00 2.43
58 59 9.152327 AGATACATGTCATCTCATTTCCTAGAA 57.848 33.333 0.00 0.00 0.00 2.10
59 60 9.770097 GATACATGTCATCTCATTTCCTAGAAA 57.230 33.333 0.00 0.00 0.00 2.52
62 63 9.471702 ACATGTCATCTCATTTCCTAGAAAATT 57.528 29.630 0.00 0.00 0.00 1.82
65 66 9.745018 TGTCATCTCATTTCCTAGAAAATTTCT 57.255 29.630 13.20 13.20 43.72 2.52
95 96 9.749340 TCTACGATAATCTTATCCTATGAACCA 57.251 33.333 0.00 0.00 36.95 3.67
102 103 8.986929 AATCTTATCCTATGAACCAAAAGGAG 57.013 34.615 0.00 0.00 41.30 3.69
103 104 6.357367 TCTTATCCTATGAACCAAAAGGAGC 58.643 40.000 0.00 0.00 41.30 4.70
104 105 4.870021 ATCCTATGAACCAAAAGGAGCT 57.130 40.909 0.00 0.00 41.30 4.09
105 106 4.657814 TCCTATGAACCAAAAGGAGCTT 57.342 40.909 0.00 0.00 33.18 3.74
106 107 5.772393 TCCTATGAACCAAAAGGAGCTTA 57.228 39.130 0.00 0.00 33.18 3.09
107 108 6.327386 TCCTATGAACCAAAAGGAGCTTAT 57.673 37.500 0.00 0.00 33.18 1.73
108 109 6.731467 TCCTATGAACCAAAAGGAGCTTATT 58.269 36.000 0.00 0.00 33.18 1.40
109 110 6.603201 TCCTATGAACCAAAAGGAGCTTATTG 59.397 38.462 0.00 0.00 33.18 1.90
110 111 6.378280 CCTATGAACCAAAAGGAGCTTATTGT 59.622 38.462 0.00 0.00 0.00 2.71
111 112 5.452078 TGAACCAAAAGGAGCTTATTGTG 57.548 39.130 0.00 0.00 0.00 3.33
112 113 3.942130 ACCAAAAGGAGCTTATTGTGC 57.058 42.857 0.00 0.00 0.00 4.57
113 114 3.500343 ACCAAAAGGAGCTTATTGTGCT 58.500 40.909 0.00 0.00 44.24 4.40
114 115 3.256631 ACCAAAAGGAGCTTATTGTGCTG 59.743 43.478 0.00 0.00 41.30 4.41
115 116 3.256631 CCAAAAGGAGCTTATTGTGCTGT 59.743 43.478 0.00 0.00 41.30 4.40
116 117 4.479619 CAAAAGGAGCTTATTGTGCTGTC 58.520 43.478 0.00 0.00 41.30 3.51
117 118 3.423539 AAGGAGCTTATTGTGCTGTCA 57.576 42.857 0.00 0.00 41.30 3.58
118 119 3.423539 AGGAGCTTATTGTGCTGTCAA 57.576 42.857 0.00 0.00 41.30 3.18
119 120 3.341823 AGGAGCTTATTGTGCTGTCAAG 58.658 45.455 0.00 0.00 41.30 3.02
120 121 2.421424 GGAGCTTATTGTGCTGTCAAGG 59.579 50.000 0.00 0.00 41.30 3.61
121 122 1.815003 AGCTTATTGTGCTGTCAAGGC 59.185 47.619 0.00 0.00 39.56 4.35
122 123 1.135286 GCTTATTGTGCTGTCAAGGCC 60.135 52.381 0.00 0.00 0.00 5.19
123 124 1.131126 CTTATTGTGCTGTCAAGGCCG 59.869 52.381 0.00 0.00 0.00 6.13
124 125 0.676466 TATTGTGCTGTCAAGGCCGG 60.676 55.000 0.00 0.00 0.00 6.13
137 138 4.830765 GCCGGCGCACTCCATACA 62.831 66.667 12.58 0.00 34.03 2.29
138 139 2.890474 CCGGCGCACTCCATACAC 60.890 66.667 10.83 0.00 0.00 2.90
139 140 3.254654 CGGCGCACTCCATACACG 61.255 66.667 10.83 0.00 0.00 4.49
142 143 3.081133 CGCACTCCATACACGCAC 58.919 61.111 0.00 0.00 0.00 5.34
143 144 1.736282 CGCACTCCATACACGCACA 60.736 57.895 0.00 0.00 0.00 4.57
144 145 1.787847 GCACTCCATACACGCACAC 59.212 57.895 0.00 0.00 0.00 3.82
146 147 0.388006 CACTCCATACACGCACACGA 60.388 55.000 0.00 0.00 43.93 4.35
147 148 0.109272 ACTCCATACACGCACACGAG 60.109 55.000 0.00 0.00 43.93 4.18
148 149 0.109272 CTCCATACACGCACACGAGT 60.109 55.000 0.00 0.00 45.28 4.18
149 150 0.109458 TCCATACACGCACACGAGTC 60.109 55.000 0.00 0.00 42.28 3.36
150 151 1.076533 CCATACACGCACACGAGTCC 61.077 60.000 0.00 0.00 42.28 3.85
151 152 1.076533 CATACACGCACACGAGTCCC 61.077 60.000 0.00 0.00 42.28 4.46
152 153 1.248785 ATACACGCACACGAGTCCCT 61.249 55.000 0.00 0.00 42.28 4.20
153 154 2.137425 TACACGCACACGAGTCCCTG 62.137 60.000 0.00 0.00 42.28 4.45
154 155 2.910479 ACGCACACGAGTCCCTGA 60.910 61.111 0.00 0.00 43.93 3.86
155 156 2.276116 ACGCACACGAGTCCCTGAT 61.276 57.895 0.00 0.00 43.93 2.90
156 157 1.517257 CGCACACGAGTCCCTGATC 60.517 63.158 0.00 0.00 43.93 2.92
157 158 1.153549 GCACACGAGTCCCTGATCC 60.154 63.158 0.00 0.00 0.00 3.36
158 159 1.517832 CACACGAGTCCCTGATCCC 59.482 63.158 0.00 0.00 0.00 3.85
159 160 2.052690 ACACGAGTCCCTGATCCCG 61.053 63.158 0.00 0.00 0.00 5.14
160 161 1.753078 CACGAGTCCCTGATCCCGA 60.753 63.158 0.00 0.00 0.00 5.14
161 162 1.000019 ACGAGTCCCTGATCCCGAA 60.000 57.895 0.00 0.00 0.00 4.30
162 163 1.038130 ACGAGTCCCTGATCCCGAAG 61.038 60.000 0.00 0.00 0.00 3.79
163 164 1.443828 GAGTCCCTGATCCCGAAGC 59.556 63.158 0.00 0.00 0.00 3.86
164 165 2.107141 GTCCCTGATCCCGAAGCG 59.893 66.667 0.00 0.00 0.00 4.68
165 166 2.043349 TCCCTGATCCCGAAGCGA 60.043 61.111 0.00 0.00 0.00 4.93
166 167 2.127869 TCCCTGATCCCGAAGCGAG 61.128 63.158 0.00 0.00 0.00 5.03
167 168 2.279784 CCTGATCCCGAAGCGAGC 60.280 66.667 0.00 0.00 0.00 5.03
168 169 2.496341 CTGATCCCGAAGCGAGCA 59.504 61.111 0.00 0.00 0.00 4.26
169 170 1.153568 CTGATCCCGAAGCGAGCAA 60.154 57.895 0.00 0.00 0.00 3.91
170 171 1.150567 CTGATCCCGAAGCGAGCAAG 61.151 60.000 0.00 0.00 0.00 4.01
171 172 1.141881 GATCCCGAAGCGAGCAAGA 59.858 57.895 0.00 0.00 0.00 3.02
172 173 0.873743 GATCCCGAAGCGAGCAAGAG 60.874 60.000 0.00 0.00 0.00 2.85
173 174 1.323271 ATCCCGAAGCGAGCAAGAGA 61.323 55.000 0.00 0.00 0.00 3.10
174 175 1.518133 CCCGAAGCGAGCAAGAGAG 60.518 63.158 0.00 0.00 0.00 3.20
175 176 1.508545 CCGAAGCGAGCAAGAGAGA 59.491 57.895 0.00 0.00 0.00 3.10
176 177 0.525242 CCGAAGCGAGCAAGAGAGAG 60.525 60.000 0.00 0.00 0.00 3.20
177 178 0.525242 CGAAGCGAGCAAGAGAGAGG 60.525 60.000 0.00 0.00 0.00 3.69
178 179 0.805711 GAAGCGAGCAAGAGAGAGGC 60.806 60.000 0.00 0.00 0.00 4.70
179 180 1.257055 AAGCGAGCAAGAGAGAGGCT 61.257 55.000 0.00 0.00 41.35 4.58
180 181 1.519013 GCGAGCAAGAGAGAGGCTG 60.519 63.158 0.00 0.00 38.15 4.85
181 182 1.141449 CGAGCAAGAGAGAGGCTGG 59.859 63.158 0.00 0.00 38.15 4.85
182 183 1.153389 GAGCAAGAGAGAGGCTGGC 60.153 63.158 0.00 0.00 38.15 4.85
183 184 1.897225 GAGCAAGAGAGAGGCTGGCA 61.897 60.000 3.38 0.00 38.15 4.92
184 185 1.002868 GCAAGAGAGAGGCTGGCAA 60.003 57.895 3.38 0.00 0.00 4.52
185 186 1.304509 GCAAGAGAGAGGCTGGCAAC 61.305 60.000 3.38 0.00 0.00 4.17
186 187 0.676151 CAAGAGAGAGGCTGGCAACC 60.676 60.000 3.38 0.00 0.00 3.77
187 188 1.130054 AAGAGAGAGGCTGGCAACCA 61.130 55.000 10.01 0.00 0.00 3.67
219 220 3.302365 AAAAATGCGTGGATTGTCAGG 57.698 42.857 0.00 0.00 0.00 3.86
220 221 1.909700 AAATGCGTGGATTGTCAGGT 58.090 45.000 0.00 0.00 0.00 4.00
221 222 1.167851 AATGCGTGGATTGTCAGGTG 58.832 50.000 0.00 0.00 0.00 4.00
222 223 1.308069 ATGCGTGGATTGTCAGGTGC 61.308 55.000 0.00 0.00 0.00 5.01
223 224 3.027170 GCGTGGATTGTCAGGTGCG 62.027 63.158 0.00 0.00 0.00 5.34
224 225 2.870372 GTGGATTGTCAGGTGCGC 59.130 61.111 0.00 0.00 0.00 6.09
225 226 2.741985 TGGATTGTCAGGTGCGCG 60.742 61.111 0.00 0.00 0.00 6.86
226 227 2.742372 GGATTGTCAGGTGCGCGT 60.742 61.111 8.43 0.00 0.00 6.01
227 228 2.476051 GATTGTCAGGTGCGCGTG 59.524 61.111 13.63 13.63 0.00 5.34
228 229 2.280797 ATTGTCAGGTGCGCGTGT 60.281 55.556 18.54 0.00 32.77 4.49
229 230 2.498761 GATTGTCAGGTGCGCGTGTG 62.499 60.000 18.54 0.00 32.77 3.82
239 240 2.176546 CGCGTGTGGGCAGATTTG 59.823 61.111 0.00 0.00 0.00 2.32
251 252 3.221964 GCAGATTTGCGGATTTTGTCT 57.778 42.857 0.00 0.00 41.13 3.41
252 253 3.174375 GCAGATTTGCGGATTTTGTCTC 58.826 45.455 0.00 0.00 41.13 3.36
253 254 3.419915 CAGATTTGCGGATTTTGTCTCG 58.580 45.455 0.00 0.00 0.00 4.04
254 255 3.125146 CAGATTTGCGGATTTTGTCTCGA 59.875 43.478 0.00 0.00 0.00 4.04
255 256 2.961522 TTTGCGGATTTTGTCTCGAC 57.038 45.000 0.00 0.00 0.00 4.20
256 257 1.153353 TTGCGGATTTTGTCTCGACC 58.847 50.000 0.00 0.00 0.00 4.79
257 258 1.011968 TGCGGATTTTGTCTCGACCG 61.012 55.000 0.00 0.00 42.63 4.79
258 259 0.734942 GCGGATTTTGTCTCGACCGA 60.735 55.000 10.60 0.00 42.40 4.69
259 260 1.922570 CGGATTTTGTCTCGACCGAT 58.077 50.000 0.00 0.00 42.40 4.18
260 261 1.852895 CGGATTTTGTCTCGACCGATC 59.147 52.381 0.00 0.00 42.40 3.69
272 273 3.550992 CCGATCGGTTTGCGACGG 61.551 66.667 26.35 0.00 34.77 4.79
273 274 2.505337 CGATCGGTTTGCGACGGA 60.505 61.111 7.38 0.00 41.17 4.69
274 275 2.089936 CGATCGGTTTGCGACGGAA 61.090 57.895 7.38 0.00 40.44 4.30
275 276 1.418755 GATCGGTTTGCGACGGAAC 59.581 57.895 0.00 0.00 40.44 3.62
288 289 4.565531 GGAACGTACAGGACCACG 57.434 61.111 1.53 1.53 43.63 4.94
289 290 1.959085 GGAACGTACAGGACCACGA 59.041 57.895 9.61 0.00 40.56 4.35
290 291 0.109412 GGAACGTACAGGACCACGAG 60.109 60.000 9.61 0.00 40.56 4.18
291 292 0.109412 GAACGTACAGGACCACGAGG 60.109 60.000 9.61 0.00 40.56 4.63
292 293 1.530013 AACGTACAGGACCACGAGGG 61.530 60.000 9.61 0.00 40.56 4.30
304 305 1.957562 ACGAGGGTGAAGAGTGACG 59.042 57.895 0.00 0.00 0.00 4.35
305 306 1.444553 CGAGGGTGAAGAGTGACGC 60.445 63.158 0.00 0.00 0.00 5.19
306 307 1.867919 CGAGGGTGAAGAGTGACGCT 61.868 60.000 0.00 0.00 38.02 5.07
307 308 0.389166 GAGGGTGAAGAGTGACGCTG 60.389 60.000 0.00 0.00 35.66 5.18
308 309 0.827925 AGGGTGAAGAGTGACGCTGA 60.828 55.000 0.00 0.00 34.35 4.26
309 310 0.667792 GGGTGAAGAGTGACGCTGAC 60.668 60.000 0.00 0.00 0.00 3.51
313 314 2.479412 GAAGAGTGACGCTGACGCCT 62.479 60.000 0.00 0.00 45.53 5.52
334 335 1.083401 CTCGCTGCGTGTCAACAAC 60.083 57.895 22.48 0.00 0.00 3.32
338 339 1.160329 GCTGCGTGTCAACAACCTCT 61.160 55.000 0.00 0.00 0.00 3.69
346 347 2.945008 TGTCAACAACCTCTTGAAGCTG 59.055 45.455 0.00 0.00 29.44 4.24
347 348 3.206150 GTCAACAACCTCTTGAAGCTGA 58.794 45.455 0.00 0.00 29.44 4.26
348 349 3.002759 GTCAACAACCTCTTGAAGCTGAC 59.997 47.826 0.00 0.00 29.44 3.51
349 350 2.945008 CAACAACCTCTTGAAGCTGACA 59.055 45.455 0.00 0.00 0.00 3.58
350 351 2.565841 ACAACCTCTTGAAGCTGACAC 58.434 47.619 0.00 0.00 0.00 3.67
351 352 1.528586 CAACCTCTTGAAGCTGACACG 59.471 52.381 0.00 0.00 0.00 4.49
357 359 4.273005 TCTTGAAGCTGACACGAAAAAC 57.727 40.909 0.00 0.00 0.00 2.43
359 361 1.329292 TGAAGCTGACACGAAAAACCG 59.671 47.619 0.00 0.00 0.00 4.44
361 363 1.370051 GCTGACACGAAAAACCGGC 60.370 57.895 0.00 0.00 0.00 6.13
373 375 1.449726 AAACCGGCGGAGGAAAACAC 61.450 55.000 35.78 0.00 34.73 3.32
384 386 2.742589 GAGGAAAACACCTCGACATTCC 59.257 50.000 0.00 0.00 45.30 3.01
386 388 2.225727 GGAAAACACCTCGACATTCCAC 59.774 50.000 0.00 0.00 37.02 4.02
387 389 1.892209 AAACACCTCGACATTCCACC 58.108 50.000 0.00 0.00 0.00 4.61
390 392 1.002087 ACACCTCGACATTCCACCTTC 59.998 52.381 0.00 0.00 0.00 3.46
392 394 1.084370 CCTCGACATTCCACCTTCGC 61.084 60.000 0.00 0.00 0.00 4.70
394 396 0.249120 TCGACATTCCACCTTCGCAT 59.751 50.000 0.00 0.00 0.00 4.73
424 426 2.049433 CGTCCACACGTCCCTGTC 60.049 66.667 0.00 0.00 41.42 3.51
425 427 2.561956 CGTCCACACGTCCCTGTCT 61.562 63.158 0.00 0.00 41.42 3.41
426 428 1.006102 GTCCACACGTCCCTGTCTG 60.006 63.158 0.00 0.00 0.00 3.51
427 429 2.357517 CCACACGTCCCTGTCTGC 60.358 66.667 0.00 0.00 0.00 4.26
432 434 4.767255 CGTCCCTGTCTGCCTGCC 62.767 72.222 0.00 0.00 0.00 4.85
458 460 1.272490 TCTTCACTACCAACCTCTGCG 59.728 52.381 0.00 0.00 0.00 5.18
460 462 1.741770 CACTACCAACCTCTGCGCC 60.742 63.158 4.18 0.00 0.00 6.53
522 525 0.035739 GTAAAGCTCCCCACGGACAA 59.964 55.000 0.00 0.00 33.32 3.18
710 728 2.436670 CATTCAATTTTACCCGACGCG 58.563 47.619 3.53 3.53 0.00 6.01
752 771 1.336056 GCATGGCTACCGCTAGTACTC 60.336 57.143 0.00 0.00 36.09 2.59
754 773 0.549950 TGGCTACCGCTAGTACTCCT 59.450 55.000 0.00 0.00 36.09 3.69
755 774 1.770658 TGGCTACCGCTAGTACTCCTA 59.229 52.381 0.00 0.00 36.09 2.94
757 776 2.486191 GGCTACCGCTAGTACTCCTACA 60.486 54.545 0.00 0.00 36.09 2.74
758 777 2.547634 GCTACCGCTAGTACTCCTACAC 59.452 54.545 0.00 0.00 0.00 2.90
774 793 0.179020 ACACCACTAGCAGCAGCAAA 60.179 50.000 3.17 0.00 45.49 3.68
776 795 0.607489 ACCACTAGCAGCAGCAAAGG 60.607 55.000 3.17 2.12 45.49 3.11
777 796 0.607489 CCACTAGCAGCAGCAAAGGT 60.607 55.000 3.17 0.00 45.49 3.50
778 797 0.520404 CACTAGCAGCAGCAAAGGTG 59.480 55.000 3.17 2.90 45.49 4.00
826 856 1.025647 TATTTTTAGGCGGCCGCGTT 61.026 50.000 45.07 34.91 43.06 4.84
827 857 1.868987 ATTTTTAGGCGGCCGCGTTT 61.869 50.000 45.07 32.50 43.06 3.60
828 858 2.073037 TTTTTAGGCGGCCGCGTTTT 62.073 50.000 45.07 30.12 43.06 2.43
829 859 2.460837 TTTTAGGCGGCCGCGTTTTC 62.461 55.000 45.07 30.20 43.06 2.29
833 863 4.337060 GCGGCCGCGTTTTCCTTT 62.337 61.111 37.24 0.00 0.00 3.11
834 864 2.333581 CGGCCGCGTTTTCCTTTT 59.666 55.556 14.67 0.00 0.00 2.27
835 865 1.728074 CGGCCGCGTTTTCCTTTTC 60.728 57.895 14.67 0.00 0.00 2.29
836 866 1.372499 GGCCGCGTTTTCCTTTTCC 60.372 57.895 4.92 0.00 0.00 3.13
865 895 2.971598 CGGCAGACAGGGGGTGAAT 61.972 63.158 0.00 0.00 0.00 2.57
868 898 1.379044 CAGACAGGGGGTGAATGCC 60.379 63.158 0.00 0.00 0.00 4.40
910 941 1.135859 CGTGAGTACGTCGGTTTAGCT 60.136 52.381 0.00 0.00 44.99 3.32
912 943 3.678662 GTGAGTACGTCGGTTTAGCTAG 58.321 50.000 0.00 0.00 0.00 3.42
914 945 1.403323 AGTACGTCGGTTTAGCTAGCC 59.597 52.381 12.13 6.41 0.00 3.93
915 946 1.133025 GTACGTCGGTTTAGCTAGCCA 59.867 52.381 12.13 0.00 0.00 4.75
916 947 0.108945 ACGTCGGTTTAGCTAGCCAC 60.109 55.000 12.13 5.91 0.00 5.01
918 949 0.535797 GTCGGTTTAGCTAGCCACCT 59.464 55.000 20.56 3.50 0.00 4.00
919 950 1.066358 GTCGGTTTAGCTAGCCACCTT 60.066 52.381 20.56 3.16 0.00 3.50
921 952 1.653151 GGTTTAGCTAGCCACCTTCG 58.347 55.000 12.13 0.00 0.00 3.79
1030 1071 2.041755 AGAATCACCCCCTCTTGTTTCC 59.958 50.000 0.00 0.00 0.00 3.13
1033 1074 2.746277 CCCCCTCTTGTTTCCGCG 60.746 66.667 0.00 0.00 0.00 6.46
1120 1166 2.285428 GCTAAATTACCTACGTGCACGC 60.285 50.000 37.35 13.69 44.43 5.34
1122 1168 1.079875 AATTACCTACGTGCACGCGG 61.080 55.000 37.35 35.15 44.43 6.46
1138 1184 1.974343 CGGAGAGATAGCCCGGGAG 60.974 68.421 29.31 0.00 39.59 4.30
1183 1232 1.982073 GCCGTTTCCCTCTCGCATTG 61.982 60.000 0.00 0.00 0.00 2.82
1190 1239 3.869272 CTCTCGCATTGTGCCGCC 61.869 66.667 0.00 0.00 41.12 6.13
1195 1248 2.747460 GCATTGTGCCGCCAGAGA 60.747 61.111 0.00 0.00 37.42 3.10
1205 1258 1.141449 CGCCAGAGAGAGCAAGAGG 59.859 63.158 0.00 0.00 0.00 3.69
1257 1310 2.203182 ACCCACCGACCTCTTCCA 59.797 61.111 0.00 0.00 0.00 3.53
1269 1322 1.533033 TCTTCCACCTCCGCTGTGA 60.533 57.895 0.00 0.00 35.74 3.58
1270 1323 1.118965 TCTTCCACCTCCGCTGTGAA 61.119 55.000 0.00 0.00 35.74 3.18
1271 1324 0.036010 CTTCCACCTCCGCTGTGAAT 60.036 55.000 0.00 0.00 35.74 2.57
1272 1325 0.400213 TTCCACCTCCGCTGTGAATT 59.600 50.000 0.00 0.00 35.74 2.17
1273 1326 0.321564 TCCACCTCCGCTGTGAATTG 60.322 55.000 0.00 0.00 35.74 2.32
1274 1327 1.308069 CCACCTCCGCTGTGAATTGG 61.308 60.000 0.00 0.00 35.74 3.16
1275 1328 0.606401 CACCTCCGCTGTGAATTGGT 60.606 55.000 0.00 0.00 35.74 3.67
1276 1329 0.110486 ACCTCCGCTGTGAATTGGTT 59.890 50.000 0.00 0.00 0.00 3.67
1277 1330 0.523072 CCTCCGCTGTGAATTGGTTG 59.477 55.000 0.00 0.00 0.00 3.77
1278 1331 0.109597 CTCCGCTGTGAATTGGTTGC 60.110 55.000 0.00 0.00 0.00 4.17
1279 1332 1.080569 CCGCTGTGAATTGGTTGCC 60.081 57.895 0.00 0.00 0.00 4.52
1280 1333 1.526575 CCGCTGTGAATTGGTTGCCT 61.527 55.000 0.00 0.00 0.00 4.75
1281 1334 0.109597 CGCTGTGAATTGGTTGCCTC 60.110 55.000 0.00 0.00 0.00 4.70
1282 1335 0.109597 GCTGTGAATTGGTTGCCTCG 60.110 55.000 0.00 0.00 0.00 4.63
1283 1336 1.238439 CTGTGAATTGGTTGCCTCGT 58.762 50.000 0.00 0.00 0.00 4.18
1284 1337 1.197721 CTGTGAATTGGTTGCCTCGTC 59.802 52.381 0.00 0.00 0.00 4.20
1285 1338 1.202758 TGTGAATTGGTTGCCTCGTCT 60.203 47.619 0.00 0.00 0.00 4.18
1286 1339 1.464997 GTGAATTGGTTGCCTCGTCTC 59.535 52.381 0.00 0.00 0.00 3.36
1287 1340 1.347707 TGAATTGGTTGCCTCGTCTCT 59.652 47.619 0.00 0.00 0.00 3.10
1288 1341 2.224523 TGAATTGGTTGCCTCGTCTCTT 60.225 45.455 0.00 0.00 0.00 2.85
1289 1342 2.100605 ATTGGTTGCCTCGTCTCTTC 57.899 50.000 0.00 0.00 0.00 2.87
1290 1343 0.034896 TTGGTTGCCTCGTCTCTTCC 59.965 55.000 0.00 0.00 0.00 3.46
1291 1344 1.118965 TGGTTGCCTCGTCTCTTCCA 61.119 55.000 0.00 0.00 0.00 3.53
1292 1345 0.390472 GGTTGCCTCGTCTCTTCCAG 60.390 60.000 0.00 0.00 0.00 3.86
1293 1346 0.603569 GTTGCCTCGTCTCTTCCAGA 59.396 55.000 0.00 0.00 0.00 3.86
1294 1347 1.205893 GTTGCCTCGTCTCTTCCAGAT 59.794 52.381 0.00 0.00 32.08 2.90
1295 1348 0.820226 TGCCTCGTCTCTTCCAGATG 59.180 55.000 0.00 0.00 39.31 2.90
1296 1349 1.107114 GCCTCGTCTCTTCCAGATGA 58.893 55.000 0.00 0.00 43.82 2.92
1297 1350 1.686052 GCCTCGTCTCTTCCAGATGAT 59.314 52.381 0.00 0.00 44.75 2.45
1298 1351 2.102252 GCCTCGTCTCTTCCAGATGATT 59.898 50.000 0.00 0.00 44.75 2.57
1299 1352 3.431486 GCCTCGTCTCTTCCAGATGATTT 60.431 47.826 0.00 0.00 44.75 2.17
1300 1353 4.764172 CCTCGTCTCTTCCAGATGATTTT 58.236 43.478 0.00 0.00 44.75 1.82
1301 1354 5.181748 CCTCGTCTCTTCCAGATGATTTTT 58.818 41.667 0.00 0.00 44.75 1.94
1302 1355 5.064452 CCTCGTCTCTTCCAGATGATTTTTG 59.936 44.000 0.00 0.00 44.75 2.44
1303 1356 4.393062 TCGTCTCTTCCAGATGATTTTTGC 59.607 41.667 0.00 0.00 41.56 3.68
1304 1357 4.437930 CGTCTCTTCCAGATGATTTTTGCC 60.438 45.833 0.00 0.00 40.29 4.52
1305 1358 4.019174 TCTCTTCCAGATGATTTTTGCCC 58.981 43.478 0.00 0.00 0.00 5.36
1306 1359 2.754552 TCTTCCAGATGATTTTTGCCCG 59.245 45.455 0.00 0.00 0.00 6.13
1307 1360 0.817013 TCCAGATGATTTTTGCCCGC 59.183 50.000 0.00 0.00 0.00 6.13
1308 1361 0.531657 CCAGATGATTTTTGCCCGCA 59.468 50.000 0.00 0.00 0.00 5.69
1327 1380 3.254947 TTTTTGTCGCGGCGCATA 58.745 50.000 32.61 16.70 0.00 3.14
1389 1460 2.019951 CCAGGAAACGTCACGTCCG 61.020 63.158 1.67 2.79 39.99 4.79
1414 1485 3.473923 AACATGGCAAGAAACAAAGGG 57.526 42.857 0.00 0.00 0.00 3.95
1746 1851 1.725641 TACAGCACGCTGATTTCTGG 58.274 50.000 25.09 0.00 46.30 3.86
1750 1855 0.110056 GCACGCTGATTTCTGGTGTG 60.110 55.000 0.00 0.00 42.24 3.82
1751 1856 0.110056 CACGCTGATTTCTGGTGTGC 60.110 55.000 0.00 0.00 35.29 4.57
2001 2106 5.163591 TGCTTAACTCCATGCATCTCAATTG 60.164 40.000 0.00 0.00 0.00 2.32
2166 2271 2.582272 TGCCAAAGCATCCATCCAC 58.418 52.632 0.00 0.00 46.52 4.02
2190 2295 6.070653 ACACATCCAATCCAATGCTGTAAAAT 60.071 34.615 0.00 0.00 0.00 1.82
2191 2296 6.256975 CACATCCAATCCAATGCTGTAAAATG 59.743 38.462 0.00 0.00 0.00 2.32
2201 2306 6.128499 CCAATGCTGTAAAATGGTTTGATGTG 60.128 38.462 0.00 0.00 0.00 3.21
2202 2307 5.528043 TGCTGTAAAATGGTTTGATGTGT 57.472 34.783 0.00 0.00 0.00 3.72
2203 2308 6.641169 TGCTGTAAAATGGTTTGATGTGTA 57.359 33.333 0.00 0.00 0.00 2.90
2204 2309 6.442952 TGCTGTAAAATGGTTTGATGTGTAC 58.557 36.000 0.00 0.00 0.00 2.90
2233 2338 1.069513 TGCTTGCATGCTCTTTGCTTT 59.930 42.857 23.31 0.00 43.37 3.51
2234 2339 1.459592 GCTTGCATGCTCTTTGCTTTG 59.540 47.619 20.33 0.00 43.37 2.77
2371 2485 2.437895 TGCATGGCTCTGCTGCTC 60.438 61.111 12.59 0.00 42.75 4.26
2377 2491 1.744741 GGCTCTGCTGCTCTTGGTC 60.745 63.158 0.00 0.00 0.00 4.02
2385 2499 0.240411 CTGCTCTTGGTCTGCTTTGC 59.760 55.000 0.00 0.00 0.00 3.68
2398 2512 1.212751 CTTTGCCTGCGCTTAACCC 59.787 57.895 9.73 0.00 35.36 4.11
2507 2621 2.752238 ACCTCCTCAGCTCCGACG 60.752 66.667 0.00 0.00 0.00 5.12
2684 2799 2.143925 GTGGAAAAACTCACCGAGGAG 58.856 52.381 0.00 2.27 40.79 3.69
2780 2900 6.317642 TCTTTCTTTCACTGAATCACCGAAAA 59.682 34.615 0.00 0.00 0.00 2.29
2789 2909 6.968904 CACTGAATCACCGAAAATGGAAATAG 59.031 38.462 0.00 0.00 0.00 1.73
2824 2944 2.162408 GGCTCAACTGGTTCATTACTGC 59.838 50.000 0.00 0.00 0.00 4.40
2829 2949 3.923017 ACTGGTTCATTACTGCTTTGC 57.077 42.857 0.00 0.00 0.00 3.68
2954 3074 3.719268 ATGGCCTTATCACACTGAACA 57.281 42.857 3.32 0.00 0.00 3.18
2955 3075 3.057969 TGGCCTTATCACACTGAACAG 57.942 47.619 3.32 0.00 0.00 3.16
2983 3104 3.932710 GGTAGTCATTCATGTTCTGCGAA 59.067 43.478 0.00 0.00 0.00 4.70
2990 3111 4.970472 TTCATGTTCTGCGAAAATTTGC 57.030 36.364 0.00 0.00 38.09 3.68
3002 3123 5.458452 TGCGAAAATTTGCTTGTGTTCTTAG 59.542 36.000 6.90 0.00 38.42 2.18
3186 3314 2.011046 GCTTCTCCTTCTGCGCAGAAT 61.011 52.381 43.32 0.00 45.40 2.40
3192 3320 1.201965 CCTTCTGCGCAGAATTTCGTC 60.202 52.381 43.32 0.00 45.40 4.20
3258 3386 1.153066 GAGGCTAAAGGAGGGCAGC 60.153 63.158 0.00 0.00 0.00 5.25
3326 3454 5.127682 AGCTCAGGTTTGTTGAATTTCAAGT 59.872 36.000 12.02 0.00 37.00 3.16
3363 3493 4.379174 GCCCAAGCTCTGACGAAA 57.621 55.556 0.00 0.00 35.50 3.46
3386 3516 2.437359 GGCTTCTGATGCAGCGGT 60.437 61.111 11.18 0.00 36.85 5.68
3389 3519 1.078918 CTTCTGATGCAGCGGTGGA 60.079 57.895 17.54 15.04 0.00 4.02
3435 3565 1.134965 ACTCCAAGCTCACTCGCATAC 60.135 52.381 0.00 0.00 0.00 2.39
3440 3570 0.247460 AGCTCACTCGCATACTGCAA 59.753 50.000 0.00 0.00 45.36 4.08
3542 3672 3.255642 ACACACTCTTGTTTGCAAACTGT 59.744 39.130 35.09 28.09 39.59 3.55
3587 3717 5.106869 TGCACAAGTAAATGTCGTAATGTCC 60.107 40.000 0.00 0.00 0.00 4.02
3667 3797 1.283321 GTTTCCTGGATCAGCCTCCTT 59.717 52.381 0.00 0.00 36.20 3.36
3668 3798 0.914644 TTCCTGGATCAGCCTCCTTG 59.085 55.000 0.00 0.00 36.20 3.61
4249 4380 3.039743 AGATGTGCCAGATGTCTCAGAT 58.960 45.455 0.00 0.00 0.00 2.90
4282 4413 4.134563 AGGAAGTACAATGCGTTGAAACT 58.865 39.130 25.13 21.56 38.71 2.66
4333 4464 2.942804 TCCTTTCATGCACAGAAACCA 58.057 42.857 11.05 0.53 32.09 3.67
4404 4535 5.447624 TGTACTGATGAAGAGAAACGTGA 57.552 39.130 0.00 0.00 0.00 4.35
4484 4615 6.311690 TGACCCGTCTTTTGAAATTGAAAAAC 59.688 34.615 0.00 0.00 0.00 2.43
4490 4621 8.047859 CGTCTTTTGAAATTGAAAAACCTAACG 58.952 33.333 0.00 0.00 0.00 3.18
4495 4626 8.934507 TTGAAATTGAAAAACCTAACGTTGAT 57.065 26.923 11.99 0.00 33.93 2.57
4546 4677 2.176889 GTAAGCTCCAGGGACACTGTA 58.823 52.381 3.53 0.00 46.06 2.74
4675 4806 0.972983 TTCCTCCGAGAAGGCCAGAG 60.973 60.000 5.01 0.54 40.77 3.35
4676 4807 1.380515 CCTCCGAGAAGGCCAGAGA 60.381 63.158 5.01 0.00 40.77 3.10
4717 4848 1.266989 CCTGAAAAAGTTGCCTCGGAC 59.733 52.381 0.00 0.00 0.00 4.79
4744 4926 1.071699 ACCGACAACAGCACAGGTAAT 59.928 47.619 0.00 0.00 0.00 1.89
4766 4948 1.196354 CTGAAGAAGAAAGTGCTGCCG 59.804 52.381 0.00 0.00 0.00 5.69
4783 4965 2.476051 GATGACACAAGCCGCGTG 59.524 61.111 4.92 4.63 40.32 5.34
4838 5020 0.482446 ATCCCAGCCACAGGAAAACA 59.518 50.000 0.00 0.00 35.30 2.83
4842 5024 1.531602 AGCCACAGGAAAACAGGGC 60.532 57.895 0.00 0.00 41.65 5.19
4888 5070 1.536943 GCACCACCTTCGAGTCTCCT 61.537 60.000 0.00 0.00 0.00 3.69
5008 5190 2.341257 CTCTTCAATGGAGACCACACG 58.659 52.381 0.00 0.00 35.80 4.49
5057 5239 1.066858 GGCGACTGTCCTTCATCAAGA 60.067 52.381 1.55 0.00 0.00 3.02
5058 5240 2.266554 GCGACTGTCCTTCATCAAGAG 58.733 52.381 1.55 0.00 0.00 2.85
5146 5328 2.673368 CGAACACACCTTCAGCTTATCC 59.327 50.000 0.00 0.00 0.00 2.59
5160 5342 8.537728 TTCAGCTTATCCATAAAACCAATCAT 57.462 30.769 0.00 0.00 0.00 2.45
5174 5356 8.618702 AAAACCAATCATAATGAATTGCACAA 57.381 26.923 0.00 0.00 0.00 3.33
5240 5422 1.165270 GGGACATGTTGTACAGGCAC 58.835 55.000 0.00 0.00 32.34 5.01
5297 5479 1.561542 CTCTACAGCAAGTGGGGGATT 59.438 52.381 0.00 0.00 0.00 3.01
5318 5500 1.248785 ACCGGAGCTCTAAGCAACGA 61.249 55.000 9.46 0.00 45.56 3.85
5381 5563 2.202987 CATGTGAGGGAGAGCGCC 60.203 66.667 2.29 0.00 0.00 6.53
5476 5658 1.067821 GCTGAATCTACGGTCTGGGAG 59.932 57.143 0.00 0.00 0.00 4.30
5496 5678 0.622665 ATCTTTCAGCTGGGGTGGAG 59.377 55.000 15.13 3.50 0.00 3.86
5507 5689 1.709994 GGGGTGGAGCCTAATCCTGG 61.710 65.000 0.00 0.00 40.29 4.45
5508 5690 0.988678 GGGTGGAGCCTAATCCTGGT 60.989 60.000 0.00 0.00 40.29 4.00
5509 5691 0.470341 GGTGGAGCCTAATCCTGGTC 59.530 60.000 0.00 0.00 40.29 4.02
5510 5692 1.501582 GTGGAGCCTAATCCTGGTCT 58.498 55.000 0.00 0.00 40.29 3.85
5565 5747 3.418995 TGGAGGTAGACGGATACATAGC 58.581 50.000 2.31 0.00 0.00 2.97
5615 5797 0.620556 ACATCGGCTCCAGATTTGGT 59.379 50.000 1.59 0.00 45.26 3.67
5622 5804 2.633488 GCTCCAGATTTGGTCCAGTAC 58.367 52.381 1.59 0.00 45.26 2.73
5637 5820 3.253188 TCCAGTACAAATGCTTTGCTGAC 59.747 43.478 0.00 8.19 44.39 3.51
5651 5834 1.625315 TGCTGACTTATGCAGGTGACT 59.375 47.619 0.00 0.00 46.44 3.41
5659 5842 7.816640 TGACTTATGCAGGTGACTAAATTTTC 58.183 34.615 0.00 0.00 40.21 2.29
5735 6209 9.793252 AATGATTTTGCACTTAACTGTATGATC 57.207 29.630 0.00 0.00 0.00 2.92
5761 6237 5.876651 TTACCTGATCAGTGTATGCATCT 57.123 39.130 21.11 0.00 0.00 2.90
5762 6238 6.976934 TTACCTGATCAGTGTATGCATCTA 57.023 37.500 21.11 4.33 0.00 1.98
5804 6286 3.777925 CACTGGCTCGCGGTTTCG 61.778 66.667 6.13 0.00 39.81 3.46
5816 6298 2.628194 CGGTTTCGCTGTAATCATCG 57.372 50.000 0.00 0.00 34.99 3.84
5817 6299 1.924524 CGGTTTCGCTGTAATCATCGT 59.075 47.619 0.00 0.00 35.19 3.73
5818 6300 3.110358 CGGTTTCGCTGTAATCATCGTA 58.890 45.455 0.00 0.00 35.19 3.43
5819 6301 3.548668 CGGTTTCGCTGTAATCATCGTAA 59.451 43.478 0.00 0.00 35.19 3.18
5820 6302 4.547587 CGGTTTCGCTGTAATCATCGTAAC 60.548 45.833 5.78 5.78 40.20 2.50
5821 6303 4.565564 GGTTTCGCTGTAATCATCGTAACT 59.434 41.667 11.26 0.00 40.49 2.24
5822 6304 5.745294 GGTTTCGCTGTAATCATCGTAACTA 59.255 40.000 11.26 0.00 40.49 2.24
5823 6305 6.254157 GGTTTCGCTGTAATCATCGTAACTAA 59.746 38.462 11.26 0.00 40.49 2.24
5824 6306 7.042925 GGTTTCGCTGTAATCATCGTAACTAAT 60.043 37.037 11.26 0.00 40.49 1.73
5825 6307 8.961092 GTTTCGCTGTAATCATCGTAACTAATA 58.039 33.333 6.68 0.00 38.96 0.98
5826 6308 9.687210 TTTCGCTGTAATCATCGTAACTAATAT 57.313 29.630 0.00 0.00 35.19 1.28
5827 6309 8.669394 TCGCTGTAATCATCGTAACTAATATG 57.331 34.615 0.00 0.00 35.19 1.78
5828 6310 8.508875 TCGCTGTAATCATCGTAACTAATATGA 58.491 33.333 0.00 0.00 35.19 2.15
5829 6311 8.576281 CGCTGTAATCATCGTAACTAATATGAC 58.424 37.037 0.00 0.00 32.40 3.06
5830 6312 8.861101 GCTGTAATCATCGTAACTAATATGACC 58.139 37.037 0.00 0.00 32.40 4.02
5831 6313 9.908152 CTGTAATCATCGTAACTAATATGACCA 57.092 33.333 0.00 0.00 32.40 4.02
5832 6314 9.687210 TGTAATCATCGTAACTAATATGACCAC 57.313 33.333 0.00 0.00 32.40 4.16
5833 6315 9.909644 GTAATCATCGTAACTAATATGACCACT 57.090 33.333 0.00 0.00 32.40 4.00
5835 6317 9.477484 AATCATCGTAACTAATATGACCACTTC 57.523 33.333 0.00 0.00 32.40 3.01
5836 6318 8.002984 TCATCGTAACTAATATGACCACTTCA 57.997 34.615 0.00 0.00 39.11 3.02
5837 6319 8.471609 TCATCGTAACTAATATGACCACTTCAA 58.528 33.333 0.00 0.00 37.92 2.69
5838 6320 8.755941 CATCGTAACTAATATGACCACTTCAAG 58.244 37.037 0.00 0.00 37.92 3.02
5839 6321 6.755141 TCGTAACTAATATGACCACTTCAAGC 59.245 38.462 0.00 0.00 37.92 4.01
5840 6322 6.757010 CGTAACTAATATGACCACTTCAAGCT 59.243 38.462 0.00 0.00 37.92 3.74
5841 6323 7.277981 CGTAACTAATATGACCACTTCAAGCTT 59.722 37.037 0.00 0.00 37.92 3.74
5842 6324 9.595823 GTAACTAATATGACCACTTCAAGCTTA 57.404 33.333 0.00 0.00 37.92 3.09
5845 6327 9.988815 ACTAATATGACCACTTCAAGCTTATAG 57.011 33.333 0.00 1.73 37.92 1.31
5846 6328 7.736447 AATATGACCACTTCAAGCTTATAGC 57.264 36.000 0.00 0.00 37.92 2.97
5862 6344 7.459394 GCTTATAGCTTGTCGTAAATGTACA 57.541 36.000 0.00 0.00 38.45 2.90
5863 6345 7.556433 GCTTATAGCTTGTCGTAAATGTACAG 58.444 38.462 0.33 0.00 38.45 2.74
5864 6346 7.222224 GCTTATAGCTTGTCGTAAATGTACAGT 59.778 37.037 0.33 0.00 38.45 3.55
5865 6347 8.624701 TTATAGCTTGTCGTAAATGTACAGTC 57.375 34.615 0.33 0.00 0.00 3.51
5866 6348 5.135508 AGCTTGTCGTAAATGTACAGTCT 57.864 39.130 0.33 0.00 0.00 3.24
5867 6349 6.263516 AGCTTGTCGTAAATGTACAGTCTA 57.736 37.500 0.33 0.00 0.00 2.59
5868 6350 6.864342 AGCTTGTCGTAAATGTACAGTCTAT 58.136 36.000 0.33 0.00 0.00 1.98
5869 6351 6.752351 AGCTTGTCGTAAATGTACAGTCTATG 59.248 38.462 0.33 0.77 0.00 2.23
5870 6352 6.508088 GCTTGTCGTAAATGTACAGTCTATGC 60.508 42.308 0.33 0.00 0.00 3.14
5871 6353 6.203808 TGTCGTAAATGTACAGTCTATGCT 57.796 37.500 0.33 0.00 0.00 3.79
5872 6354 6.033966 TGTCGTAAATGTACAGTCTATGCTG 58.966 40.000 0.33 0.00 41.92 4.41
5873 6355 5.459107 GTCGTAAATGTACAGTCTATGCTGG 59.541 44.000 0.33 0.00 40.59 4.85
5874 6356 5.358725 TCGTAAATGTACAGTCTATGCTGGA 59.641 40.000 0.33 0.00 40.59 3.86
5875 6357 6.040504 TCGTAAATGTACAGTCTATGCTGGAT 59.959 38.462 0.33 0.00 40.59 3.41
5876 6358 6.144563 CGTAAATGTACAGTCTATGCTGGATG 59.855 42.308 0.33 0.00 40.59 3.51
5877 6359 3.459232 TGTACAGTCTATGCTGGATGC 57.541 47.619 0.00 0.00 40.59 3.91
5878 6360 3.033909 TGTACAGTCTATGCTGGATGCT 58.966 45.455 0.00 0.00 43.37 3.79
5879 6361 2.616634 ACAGTCTATGCTGGATGCTG 57.383 50.000 0.00 0.91 43.37 4.41
5880 6362 1.227639 CAGTCTATGCTGGATGCTGC 58.772 55.000 9.20 9.20 43.37 5.25
5881 6363 0.249784 AGTCTATGCTGGATGCTGCG 60.250 55.000 11.29 0.00 43.37 5.18
5882 6364 0.249615 GTCTATGCTGGATGCTGCGA 60.250 55.000 11.29 0.32 43.37 5.10
5883 6365 0.033090 TCTATGCTGGATGCTGCGAG 59.967 55.000 11.29 10.68 43.37 5.03
5884 6366 1.566882 CTATGCTGGATGCTGCGAGC 61.567 60.000 11.29 6.47 43.37 5.03
5886 6368 4.853050 GCTGGATGCTGCGAGCCT 62.853 66.667 0.00 0.00 41.51 4.58
5887 6369 2.895865 CTGGATGCTGCGAGCCTG 60.896 66.667 7.64 4.14 41.51 4.85
5901 6383 2.571757 CCTGCGAGGCGTACTTGA 59.428 61.111 0.00 0.00 31.73 3.02
5902 6384 1.805945 CCTGCGAGGCGTACTTGAC 60.806 63.158 0.00 0.00 31.73 3.18
5903 6385 1.805945 CTGCGAGGCGTACTTGACC 60.806 63.158 0.00 0.00 31.73 4.02
5904 6386 2.879462 GCGAGGCGTACTTGACCG 60.879 66.667 0.00 0.00 31.73 4.79
5913 6395 1.864711 CGTACTTGACCGCAATATGGG 59.135 52.381 0.00 0.00 32.68 4.00
5914 6396 2.740580 CGTACTTGACCGCAATATGGGT 60.741 50.000 0.00 0.00 39.83 4.51
5915 6397 2.507407 ACTTGACCGCAATATGGGTT 57.493 45.000 0.00 0.00 36.46 4.11
5916 6398 2.091541 ACTTGACCGCAATATGGGTTG 58.908 47.619 0.00 0.00 36.46 3.77
5917 6399 2.091541 CTTGACCGCAATATGGGTTGT 58.908 47.619 0.00 0.00 36.46 3.32
5918 6400 1.458398 TGACCGCAATATGGGTTGTG 58.542 50.000 0.00 0.00 36.46 3.33
5919 6401 1.003696 TGACCGCAATATGGGTTGTGA 59.996 47.619 2.08 0.00 41.00 3.58
5920 6402 1.400494 GACCGCAATATGGGTTGTGAC 59.600 52.381 2.08 0.00 41.00 3.67
5921 6403 0.376852 CCGCAATATGGGTTGTGACG 59.623 55.000 2.08 0.00 41.00 4.35
5922 6404 0.376852 CGCAATATGGGTTGTGACGG 59.623 55.000 0.00 0.00 41.00 4.79
5923 6405 0.738389 GCAATATGGGTTGTGACGGG 59.262 55.000 0.00 0.00 0.00 5.28
5924 6406 1.953311 GCAATATGGGTTGTGACGGGT 60.953 52.381 0.00 0.00 0.00 5.28
5925 6407 2.681390 GCAATATGGGTTGTGACGGGTA 60.681 50.000 0.00 0.00 0.00 3.69
5926 6408 3.202906 CAATATGGGTTGTGACGGGTAG 58.797 50.000 0.00 0.00 0.00 3.18
5927 6409 1.941377 TATGGGTTGTGACGGGTAGT 58.059 50.000 0.00 0.00 0.00 2.73
5928 6410 0.323629 ATGGGTTGTGACGGGTAGTG 59.676 55.000 0.00 0.00 0.00 2.74
5929 6411 1.670083 GGGTTGTGACGGGTAGTGC 60.670 63.158 0.00 0.00 0.00 4.40
5930 6412 1.070105 GGTTGTGACGGGTAGTGCA 59.930 57.895 0.00 0.00 0.00 4.57
5931 6413 1.226030 GGTTGTGACGGGTAGTGCAC 61.226 60.000 9.40 9.40 34.06 4.57
5941 6423 1.739067 GGTAGTGCACCTGTCATTCC 58.261 55.000 14.63 0.00 44.79 3.01
5942 6424 1.679032 GGTAGTGCACCTGTCATTCCC 60.679 57.143 14.63 0.00 44.79 3.97
5943 6425 1.279271 GTAGTGCACCTGTCATTCCCT 59.721 52.381 14.63 0.00 0.00 4.20
5944 6426 0.773644 AGTGCACCTGTCATTCCCTT 59.226 50.000 14.63 0.00 0.00 3.95
5945 6427 1.145738 AGTGCACCTGTCATTCCCTTT 59.854 47.619 14.63 0.00 0.00 3.11
5946 6428 1.541588 GTGCACCTGTCATTCCCTTTC 59.458 52.381 5.22 0.00 0.00 2.62
5947 6429 1.177401 GCACCTGTCATTCCCTTTCC 58.823 55.000 0.00 0.00 0.00 3.13
5948 6430 1.272147 GCACCTGTCATTCCCTTTCCT 60.272 52.381 0.00 0.00 0.00 3.36
5949 6431 2.716217 CACCTGTCATTCCCTTTCCTC 58.284 52.381 0.00 0.00 0.00 3.71
5950 6432 2.307098 CACCTGTCATTCCCTTTCCTCT 59.693 50.000 0.00 0.00 0.00 3.69
5951 6433 2.989571 ACCTGTCATTCCCTTTCCTCTT 59.010 45.455 0.00 0.00 0.00 2.85
5952 6434 3.245052 ACCTGTCATTCCCTTTCCTCTTG 60.245 47.826 0.00 0.00 0.00 3.02
5953 6435 3.245052 CCTGTCATTCCCTTTCCTCTTGT 60.245 47.826 0.00 0.00 0.00 3.16
5954 6436 4.006319 CTGTCATTCCCTTTCCTCTTGTC 58.994 47.826 0.00 0.00 0.00 3.18
5955 6437 3.244911 TGTCATTCCCTTTCCTCTTGTCC 60.245 47.826 0.00 0.00 0.00 4.02
5956 6438 3.009584 GTCATTCCCTTTCCTCTTGTCCT 59.990 47.826 0.00 0.00 0.00 3.85
5957 6439 3.264450 TCATTCCCTTTCCTCTTGTCCTC 59.736 47.826 0.00 0.00 0.00 3.71
5958 6440 2.723530 TCCCTTTCCTCTTGTCCTCT 57.276 50.000 0.00 0.00 0.00 3.69
5959 6441 3.847042 TCCCTTTCCTCTTGTCCTCTA 57.153 47.619 0.00 0.00 0.00 2.43
5960 6442 4.354208 TCCCTTTCCTCTTGTCCTCTAT 57.646 45.455 0.00 0.00 0.00 1.98
5961 6443 5.483174 TCCCTTTCCTCTTGTCCTCTATA 57.517 43.478 0.00 0.00 0.00 1.31
5962 6444 5.209659 TCCCTTTCCTCTTGTCCTCTATAC 58.790 45.833 0.00 0.00 0.00 1.47
5963 6445 4.962995 CCCTTTCCTCTTGTCCTCTATACA 59.037 45.833 0.00 0.00 0.00 2.29
5964 6446 5.069781 CCCTTTCCTCTTGTCCTCTATACAG 59.930 48.000 0.00 0.00 0.00 2.74
5965 6447 5.452636 CCTTTCCTCTTGTCCTCTATACAGC 60.453 48.000 0.00 0.00 0.00 4.40
5966 6448 4.528076 TCCTCTTGTCCTCTATACAGCT 57.472 45.455 0.00 0.00 0.00 4.24
5967 6449 5.648330 TCCTCTTGTCCTCTATACAGCTA 57.352 43.478 0.00 0.00 0.00 3.32
5968 6450 6.014771 TCCTCTTGTCCTCTATACAGCTAA 57.985 41.667 0.00 0.00 0.00 3.09
5969 6451 5.828859 TCCTCTTGTCCTCTATACAGCTAAC 59.171 44.000 0.00 0.00 0.00 2.34
5970 6452 5.830991 CCTCTTGTCCTCTATACAGCTAACT 59.169 44.000 0.00 0.00 0.00 2.24
6087 6785 6.878923 ACATCGACATTTTCTCTCATTGGTTA 59.121 34.615 0.00 0.00 0.00 2.85
6111 6809 9.933723 TTAAGTACAAACTTAGTGAATACTCCC 57.066 33.333 0.00 0.00 46.28 4.30
6112 6810 7.793948 AGTACAAACTTAGTGAATACTCCCT 57.206 36.000 0.00 0.00 38.36 4.20
6113 6811 7.838884 AGTACAAACTTAGTGAATACTCCCTC 58.161 38.462 0.00 0.00 38.36 4.30
6114 6812 6.051179 ACAAACTTAGTGAATACTCCCTCC 57.949 41.667 0.00 0.00 38.36 4.30
6115 6813 5.109903 CAAACTTAGTGAATACTCCCTCCG 58.890 45.833 0.00 0.00 38.36 4.63
6116 6814 3.978610 ACTTAGTGAATACTCCCTCCGT 58.021 45.455 0.00 0.00 38.36 4.69
6117 6815 4.351127 ACTTAGTGAATACTCCCTCCGTT 58.649 43.478 0.00 0.00 38.36 4.44
6118 6816 4.159879 ACTTAGTGAATACTCCCTCCGTTG 59.840 45.833 0.00 0.00 38.36 4.10
6119 6817 2.816411 AGTGAATACTCCCTCCGTTGA 58.184 47.619 0.00 0.00 28.79 3.18
6120 6818 2.761208 AGTGAATACTCCCTCCGTTGAG 59.239 50.000 0.00 0.00 33.15 3.02
6121 6819 2.496470 GTGAATACTCCCTCCGTTGAGT 59.504 50.000 0.00 0.00 43.85 3.41
6122 6820 2.758979 TGAATACTCCCTCCGTTGAGTC 59.241 50.000 0.00 0.00 40.84 3.36
6123 6821 2.526888 ATACTCCCTCCGTTGAGTCA 57.473 50.000 0.00 0.00 40.84 3.41
6124 6822 1.835494 TACTCCCTCCGTTGAGTCAG 58.165 55.000 0.00 0.00 40.84 3.51
6125 6823 0.178958 ACTCCCTCCGTTGAGTCAGT 60.179 55.000 0.00 0.00 37.24 3.41
6126 6824 0.969894 CTCCCTCCGTTGAGTCAGTT 59.030 55.000 0.00 0.00 36.86 3.16
6127 6825 2.168496 CTCCCTCCGTTGAGTCAGTTA 58.832 52.381 0.00 0.00 36.86 2.24
6128 6826 2.761208 CTCCCTCCGTTGAGTCAGTTAT 59.239 50.000 0.00 0.00 36.86 1.89
6129 6827 3.170717 TCCCTCCGTTGAGTCAGTTATT 58.829 45.455 0.00 0.00 36.86 1.40
6130 6828 4.346730 TCCCTCCGTTGAGTCAGTTATTA 58.653 43.478 0.00 0.00 36.86 0.98
6131 6829 4.159135 TCCCTCCGTTGAGTCAGTTATTAC 59.841 45.833 0.00 0.00 36.86 1.89
6132 6830 4.081862 CCCTCCGTTGAGTCAGTTATTACA 60.082 45.833 0.00 0.00 36.86 2.41
6133 6831 5.475719 CCTCCGTTGAGTCAGTTATTACAA 58.524 41.667 0.00 0.00 36.86 2.41
6134 6832 5.929992 CCTCCGTTGAGTCAGTTATTACAAA 59.070 40.000 0.00 0.00 36.86 2.83
6135 6833 6.090898 CCTCCGTTGAGTCAGTTATTACAAAG 59.909 42.308 0.00 0.00 36.86 2.77
6136 6834 6.518493 TCCGTTGAGTCAGTTATTACAAAGT 58.482 36.000 0.00 0.00 0.00 2.66
6137 6835 6.987992 TCCGTTGAGTCAGTTATTACAAAGTT 59.012 34.615 0.00 0.00 0.00 2.66
6138 6836 7.042321 TCCGTTGAGTCAGTTATTACAAAGTTG 60.042 37.037 0.00 0.00 0.00 3.16
6139 6837 7.042321 CCGTTGAGTCAGTTATTACAAAGTTGA 60.042 37.037 0.00 0.00 0.00 3.18
6140 6838 8.004344 CGTTGAGTCAGTTATTACAAAGTTGAG 58.996 37.037 0.00 0.00 0.00 3.02
6141 6839 8.827677 GTTGAGTCAGTTATTACAAAGTTGAGT 58.172 33.333 0.00 0.00 0.00 3.41
6142 6840 8.589335 TGAGTCAGTTATTACAAAGTTGAGTC 57.411 34.615 0.00 0.00 0.00 3.36
6143 6841 8.201464 TGAGTCAGTTATTACAAAGTTGAGTCA 58.799 33.333 5.31 5.31 32.81 3.41
6144 6842 8.366671 AGTCAGTTATTACAAAGTTGAGTCAC 57.633 34.615 0.00 0.00 0.00 3.67
6145 6843 8.204836 AGTCAGTTATTACAAAGTTGAGTCACT 58.795 33.333 0.00 0.00 0.00 3.41
6146 6844 8.827677 GTCAGTTATTACAAAGTTGAGTCACTT 58.172 33.333 0.00 0.00 38.74 3.16
6153 6851 9.965824 ATTACAAAGTTGAGTCACTTATTTTGG 57.034 29.630 12.94 0.78 35.87 3.28
6154 6852 6.805713 ACAAAGTTGAGTCACTTATTTTGGG 58.194 36.000 12.94 0.00 35.87 4.12
6155 6853 6.605594 ACAAAGTTGAGTCACTTATTTTGGGA 59.394 34.615 12.94 0.00 35.87 4.37
6156 6854 6.635030 AAGTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
6157 6855 4.755123 AGTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
6158 6856 4.610605 TGAGTCACTTATTTTGGGACGA 57.389 40.909 0.00 0.00 33.84 4.20
6159 6857 4.963373 TGAGTCACTTATTTTGGGACGAA 58.037 39.130 0.00 0.00 33.84 3.85
6160 6858 4.994852 TGAGTCACTTATTTTGGGACGAAG 59.005 41.667 0.00 0.00 33.84 3.79
6161 6859 4.324267 AGTCACTTATTTTGGGACGAAGG 58.676 43.478 0.00 0.00 33.84 3.46
6162 6860 3.439129 GTCACTTATTTTGGGACGAAGGG 59.561 47.826 0.00 0.00 0.00 3.95
6163 6861 3.328343 TCACTTATTTTGGGACGAAGGGA 59.672 43.478 0.00 0.00 0.00 4.20
6164 6862 3.689649 CACTTATTTTGGGACGAAGGGAG 59.310 47.826 0.00 0.00 0.00 4.30
6222 7144 3.360867 TCAGCTTTCAAAACCTTCCACA 58.639 40.909 0.00 0.00 0.00 4.17
6240 7162 6.627395 TCCACAAATCGTAAACATTCAACT 57.373 33.333 0.00 0.00 0.00 3.16
6241 7163 7.033530 TCCACAAATCGTAAACATTCAACTT 57.966 32.000 0.00 0.00 0.00 2.66
6242 7164 8.155821 TCCACAAATCGTAAACATTCAACTTA 57.844 30.769 0.00 0.00 0.00 2.24
6243 7165 8.286800 TCCACAAATCGTAAACATTCAACTTAG 58.713 33.333 0.00 0.00 0.00 2.18
6244 7166 8.286800 CCACAAATCGTAAACATTCAACTTAGA 58.713 33.333 0.00 0.00 0.00 2.10
6245 7167 9.658475 CACAAATCGTAAACATTCAACTTAGAA 57.342 29.630 0.00 0.00 0.00 2.10
6252 7174 9.931210 CGTAAACATTCAACTTAGAAAAGAAGT 57.069 29.630 0.00 0.00 38.81 3.01
6259 7181 9.884465 ATTCAACTTAGAAAAGAAGTTCATTCG 57.116 29.630 5.50 0.65 43.59 3.34
6260 7182 7.352739 TCAACTTAGAAAAGAAGTTCATTCGC 58.647 34.615 5.50 0.00 43.59 4.70
6261 7183 6.861065 ACTTAGAAAAGAAGTTCATTCGCA 57.139 33.333 5.50 1.21 43.16 5.10
6262 7184 7.259290 ACTTAGAAAAGAAGTTCATTCGCAA 57.741 32.000 5.50 8.01 43.16 4.85
6263 7185 7.703328 ACTTAGAAAAGAAGTTCATTCGCAAA 58.297 30.769 5.50 6.30 43.16 3.68
6264 7186 8.188139 ACTTAGAAAAGAAGTTCATTCGCAAAA 58.812 29.630 5.50 4.35 43.16 2.44
6265 7187 8.918961 TTAGAAAAGAAGTTCATTCGCAAAAA 57.081 26.923 5.50 0.76 43.16 1.94
6370 7292 1.079336 GTGTAGAACGGGTGGAGGC 60.079 63.158 0.00 0.00 0.00 4.70
6520 7473 2.357637 TGTGGGCTTCTTTTCAGTTTCG 59.642 45.455 0.00 0.00 0.00 3.46
6539 7492 2.304761 TCGTTGGGCCTAGAAGAAACAT 59.695 45.455 4.53 0.00 0.00 2.71
6562 7515 2.039879 TGGGCTTTGGTTAACTCTCTCC 59.960 50.000 5.42 2.34 0.00 3.71
6598 7558 2.772077 GGAACCCTTCCTCTCACTTC 57.228 55.000 0.00 0.00 46.57 3.01
6599 7559 2.261729 GGAACCCTTCCTCTCACTTCT 58.738 52.381 0.00 0.00 46.57 2.85
6612 7572 2.630098 CTCACTTCTCCAGTTCTCACCA 59.370 50.000 0.00 0.00 30.92 4.17
6620 7580 1.548269 CCAGTTCTCACCACCTCTCTC 59.452 57.143 0.00 0.00 0.00 3.20
6627 7587 1.081277 ACCACCTCTCTCCCCTTCC 59.919 63.158 0.00 0.00 0.00 3.46
6650 7610 2.202878 CGCGGACGGTTGATCCAT 60.203 61.111 0.00 0.00 35.83 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.343168 CTATGAGTAGGAATAGGAAACGAGAT 57.657 38.462 0.00 0.00 0.00 2.75
1 2 7.747155 CTATGAGTAGGAATAGGAAACGAGA 57.253 40.000 0.00 0.00 0.00 4.04
16 17 9.853555 GACATGTATCTCAAATCCTATGAGTAG 57.146 37.037 0.00 0.00 43.77 2.57
17 18 9.367160 TGACATGTATCTCAAATCCTATGAGTA 57.633 33.333 0.00 0.00 43.77 2.59
18 19 8.255111 TGACATGTATCTCAAATCCTATGAGT 57.745 34.615 0.00 0.00 43.77 3.41
19 20 9.368674 GATGACATGTATCTCAAATCCTATGAG 57.631 37.037 0.00 0.00 44.53 2.90
20 21 9.097946 AGATGACATGTATCTCAAATCCTATGA 57.902 33.333 0.00 0.00 29.05 2.15
21 22 9.368674 GAGATGACATGTATCTCAAATCCTATG 57.631 37.037 24.95 0.00 46.22 2.23
31 32 8.801299 TCTAGGAAATGAGATGACATGTATCTC 58.199 37.037 24.04 24.04 46.82 2.75
32 33 8.718158 TCTAGGAAATGAGATGACATGTATCT 57.282 34.615 14.05 14.05 37.59 1.98
33 34 9.770097 TTTCTAGGAAATGAGATGACATGTATC 57.230 33.333 0.00 2.87 0.00 2.24
36 37 9.471702 AATTTTCTAGGAAATGAGATGACATGT 57.528 29.630 9.85 0.00 30.06 3.21
39 40 9.745018 AGAAATTTTCTAGGAAATGAGATGACA 57.255 29.630 9.85 0.00 38.49 3.58
69 70 9.749340 TGGTTCATAGGATAAGATTATCGTAGA 57.251 33.333 15.99 11.97 41.20 2.59
77 78 7.503902 GCTCCTTTTGGTTCATAGGATAAGATT 59.496 37.037 0.00 0.00 41.38 2.40
78 79 7.001073 GCTCCTTTTGGTTCATAGGATAAGAT 58.999 38.462 0.00 0.00 41.38 2.40
79 80 6.158695 AGCTCCTTTTGGTTCATAGGATAAGA 59.841 38.462 0.00 0.00 41.38 2.10
80 81 6.360618 AGCTCCTTTTGGTTCATAGGATAAG 58.639 40.000 0.00 0.00 41.38 1.73
81 82 6.327386 AGCTCCTTTTGGTTCATAGGATAA 57.673 37.500 0.00 0.00 41.38 1.75
82 83 5.975988 AGCTCCTTTTGGTTCATAGGATA 57.024 39.130 0.00 0.00 41.38 2.59
83 84 4.870021 AGCTCCTTTTGGTTCATAGGAT 57.130 40.909 0.00 0.00 41.38 3.24
84 85 4.657814 AAGCTCCTTTTGGTTCATAGGA 57.342 40.909 0.00 0.00 41.38 2.94
85 86 6.378280 ACAATAAGCTCCTTTTGGTTCATAGG 59.622 38.462 0.00 0.00 41.38 2.57
86 87 7.253422 CACAATAAGCTCCTTTTGGTTCATAG 58.747 38.462 0.00 0.00 41.38 2.23
87 88 6.350110 GCACAATAAGCTCCTTTTGGTTCATA 60.350 38.462 0.00 0.00 41.38 2.15
88 89 5.567423 GCACAATAAGCTCCTTTTGGTTCAT 60.567 40.000 0.00 0.00 41.38 2.57
89 90 4.261994 GCACAATAAGCTCCTTTTGGTTCA 60.262 41.667 0.00 0.00 41.38 3.18
90 91 4.021981 AGCACAATAAGCTCCTTTTGGTTC 60.022 41.667 0.00 0.00 38.01 3.62
91 92 3.897505 AGCACAATAAGCTCCTTTTGGTT 59.102 39.130 0.00 0.00 38.01 3.67
92 93 3.256631 CAGCACAATAAGCTCCTTTTGGT 59.743 43.478 0.00 0.00 41.14 3.67
93 94 3.256631 ACAGCACAATAAGCTCCTTTTGG 59.743 43.478 0.00 0.00 41.14 3.28
94 95 4.022935 TGACAGCACAATAAGCTCCTTTTG 60.023 41.667 0.00 0.00 41.14 2.44
95 96 4.144297 TGACAGCACAATAAGCTCCTTTT 58.856 39.130 0.00 0.00 41.14 2.27
96 97 3.754965 TGACAGCACAATAAGCTCCTTT 58.245 40.909 0.00 0.00 41.14 3.11
97 98 3.423539 TGACAGCACAATAAGCTCCTT 57.576 42.857 0.00 0.00 41.14 3.36
98 99 3.341823 CTTGACAGCACAATAAGCTCCT 58.658 45.455 0.00 0.00 41.14 3.69
99 100 2.421424 CCTTGACAGCACAATAAGCTCC 59.579 50.000 0.00 0.00 41.14 4.70
100 101 2.159462 GCCTTGACAGCACAATAAGCTC 60.159 50.000 0.00 0.00 41.14 4.09
101 102 1.815003 GCCTTGACAGCACAATAAGCT 59.185 47.619 0.00 0.00 44.62 3.74
102 103 1.135286 GGCCTTGACAGCACAATAAGC 60.135 52.381 0.00 0.00 0.00 3.09
103 104 1.131126 CGGCCTTGACAGCACAATAAG 59.869 52.381 0.00 0.00 0.00 1.73
104 105 1.164411 CGGCCTTGACAGCACAATAA 58.836 50.000 0.00 0.00 0.00 1.40
105 106 0.676466 CCGGCCTTGACAGCACAATA 60.676 55.000 0.00 0.00 0.00 1.90
106 107 1.973281 CCGGCCTTGACAGCACAAT 60.973 57.895 0.00 0.00 0.00 2.71
107 108 2.594303 CCGGCCTTGACAGCACAA 60.594 61.111 0.00 0.00 0.00 3.33
120 121 4.830765 TGTATGGAGTGCGCCGGC 62.831 66.667 19.07 19.07 40.52 6.13
121 122 2.890474 GTGTATGGAGTGCGCCGG 60.890 66.667 4.18 0.00 0.00 6.13
122 123 3.254654 CGTGTATGGAGTGCGCCG 61.255 66.667 4.18 0.00 0.00 6.46
123 124 3.564027 GCGTGTATGGAGTGCGCC 61.564 66.667 4.18 0.00 41.93 6.53
124 125 2.813474 TGCGTGTATGGAGTGCGC 60.813 61.111 0.00 0.00 47.00 6.09
125 126 1.736282 TGTGCGTGTATGGAGTGCG 60.736 57.895 0.00 0.00 0.00 5.34
126 127 1.787847 GTGTGCGTGTATGGAGTGC 59.212 57.895 0.00 0.00 0.00 4.40
127 128 0.388006 TCGTGTGCGTGTATGGAGTG 60.388 55.000 0.00 0.00 39.49 3.51
128 129 0.109272 CTCGTGTGCGTGTATGGAGT 60.109 55.000 0.00 0.00 39.49 3.85
129 130 0.109272 ACTCGTGTGCGTGTATGGAG 60.109 55.000 0.00 0.00 42.06 3.86
130 131 0.109458 GACTCGTGTGCGTGTATGGA 60.109 55.000 0.00 0.00 43.57 3.41
131 132 1.076533 GGACTCGTGTGCGTGTATGG 61.077 60.000 0.00 0.00 43.57 2.74
132 133 1.076533 GGGACTCGTGTGCGTGTATG 61.077 60.000 3.01 0.00 43.57 2.39
133 134 1.214589 GGGACTCGTGTGCGTGTAT 59.785 57.895 3.01 0.00 43.57 2.29
134 135 1.900016 AGGGACTCGTGTGCGTGTA 60.900 57.895 3.53 0.00 43.57 2.90
135 136 3.224324 AGGGACTCGTGTGCGTGT 61.224 61.111 3.53 0.00 45.74 4.49
136 137 2.492449 ATCAGGGACTCGTGTGCGTG 62.492 60.000 20.94 20.94 46.71 5.34
137 138 2.214181 GATCAGGGACTCGTGTGCGT 62.214 60.000 3.01 0.65 34.60 5.24
138 139 1.517257 GATCAGGGACTCGTGTGCG 60.517 63.158 3.01 0.00 34.60 5.34
139 140 1.153549 GGATCAGGGACTCGTGTGC 60.154 63.158 0.00 0.00 34.60 4.57
140 141 1.517832 GGGATCAGGGACTCGTGTG 59.482 63.158 0.00 0.00 34.60 3.82
141 142 2.052690 CGGGATCAGGGACTCGTGT 61.053 63.158 0.00 0.00 34.60 4.49
142 143 1.320344 TTCGGGATCAGGGACTCGTG 61.320 60.000 0.00 0.00 34.60 4.35
143 144 1.000019 TTCGGGATCAGGGACTCGT 60.000 57.895 0.00 0.00 34.60 4.18
144 145 1.736586 CTTCGGGATCAGGGACTCG 59.263 63.158 0.00 0.00 34.60 4.18
145 146 1.443828 GCTTCGGGATCAGGGACTC 59.556 63.158 0.00 0.00 34.60 3.36
146 147 2.427245 CGCTTCGGGATCAGGGACT 61.427 63.158 0.00 0.00 43.88 3.85
147 148 2.107141 CGCTTCGGGATCAGGGAC 59.893 66.667 0.00 0.00 0.00 4.46
148 149 2.043349 TCGCTTCGGGATCAGGGA 60.043 61.111 0.00 0.00 0.00 4.20
149 150 2.419198 CTCGCTTCGGGATCAGGG 59.581 66.667 0.00 0.00 0.00 4.45
150 151 2.279784 GCTCGCTTCGGGATCAGG 60.280 66.667 0.00 0.00 0.00 3.86
151 152 1.150567 CTTGCTCGCTTCGGGATCAG 61.151 60.000 0.00 0.00 0.00 2.90
152 153 1.153568 CTTGCTCGCTTCGGGATCA 60.154 57.895 0.00 0.00 0.00 2.92
153 154 0.873743 CTCTTGCTCGCTTCGGGATC 60.874 60.000 0.00 0.00 0.00 3.36
154 155 1.142748 CTCTTGCTCGCTTCGGGAT 59.857 57.895 0.00 0.00 0.00 3.85
155 156 1.938657 CTCTCTTGCTCGCTTCGGGA 61.939 60.000 0.00 0.00 0.00 5.14
156 157 1.518133 CTCTCTTGCTCGCTTCGGG 60.518 63.158 0.00 0.00 0.00 5.14
157 158 0.525242 CTCTCTCTTGCTCGCTTCGG 60.525 60.000 0.00 0.00 0.00 4.30
158 159 0.525242 CCTCTCTCTTGCTCGCTTCG 60.525 60.000 0.00 0.00 0.00 3.79
159 160 0.805711 GCCTCTCTCTTGCTCGCTTC 60.806 60.000 0.00 0.00 0.00 3.86
160 161 1.217779 GCCTCTCTCTTGCTCGCTT 59.782 57.895 0.00 0.00 0.00 4.68
161 162 1.682005 AGCCTCTCTCTTGCTCGCT 60.682 57.895 0.00 0.00 0.00 4.93
162 163 1.519013 CAGCCTCTCTCTTGCTCGC 60.519 63.158 0.00 0.00 31.77 5.03
163 164 1.141449 CCAGCCTCTCTCTTGCTCG 59.859 63.158 0.00 0.00 31.77 5.03
164 165 1.153389 GCCAGCCTCTCTCTTGCTC 60.153 63.158 0.00 0.00 31.77 4.26
165 166 1.486997 TTGCCAGCCTCTCTCTTGCT 61.487 55.000 0.00 0.00 35.25 3.91
166 167 1.002868 TTGCCAGCCTCTCTCTTGC 60.003 57.895 0.00 0.00 0.00 4.01
167 168 0.676151 GGTTGCCAGCCTCTCTCTTG 60.676 60.000 0.00 0.00 0.00 3.02
168 169 1.130054 TGGTTGCCAGCCTCTCTCTT 61.130 55.000 0.00 0.00 0.00 2.85
169 170 1.537397 TGGTTGCCAGCCTCTCTCT 60.537 57.895 0.00 0.00 0.00 3.10
170 171 1.078567 CTGGTTGCCAGCCTCTCTC 60.079 63.158 0.00 0.00 45.13 3.20
171 172 3.076092 CTGGTTGCCAGCCTCTCT 58.924 61.111 0.00 0.00 45.13 3.10
179 180 2.429930 CCTTCGGTCTGGTTGCCA 59.570 61.111 0.00 0.00 0.00 4.92
180 181 3.056328 GCCTTCGGTCTGGTTGCC 61.056 66.667 0.00 0.00 0.00 4.52
181 182 1.452145 TTTGCCTTCGGTCTGGTTGC 61.452 55.000 0.00 0.00 0.00 4.17
182 183 1.028905 TTTTGCCTTCGGTCTGGTTG 58.971 50.000 0.00 0.00 0.00 3.77
183 184 1.770294 TTTTTGCCTTCGGTCTGGTT 58.230 45.000 0.00 0.00 0.00 3.67
184 185 3.505835 TTTTTGCCTTCGGTCTGGT 57.494 47.368 0.00 0.00 0.00 4.00
199 200 2.627699 ACCTGACAATCCACGCATTTTT 59.372 40.909 0.00 0.00 0.00 1.94
200 201 2.030007 CACCTGACAATCCACGCATTTT 60.030 45.455 0.00 0.00 0.00 1.82
201 202 1.541147 CACCTGACAATCCACGCATTT 59.459 47.619 0.00 0.00 0.00 2.32
202 203 1.167851 CACCTGACAATCCACGCATT 58.832 50.000 0.00 0.00 0.00 3.56
203 204 1.308069 GCACCTGACAATCCACGCAT 61.308 55.000 0.00 0.00 0.00 4.73
204 205 1.965930 GCACCTGACAATCCACGCA 60.966 57.895 0.00 0.00 0.00 5.24
205 206 2.870372 GCACCTGACAATCCACGC 59.130 61.111 0.00 0.00 0.00 5.34
206 207 3.027170 GCGCACCTGACAATCCACG 62.027 63.158 0.30 0.00 0.00 4.94
207 208 2.870372 GCGCACCTGACAATCCAC 59.130 61.111 0.30 0.00 0.00 4.02
208 209 2.741985 CGCGCACCTGACAATCCA 60.742 61.111 8.75 0.00 0.00 3.41
209 210 2.742372 ACGCGCACCTGACAATCC 60.742 61.111 5.73 0.00 0.00 3.01
210 211 2.317609 ACACGCGCACCTGACAATC 61.318 57.895 5.73 0.00 0.00 2.67
211 212 2.280797 ACACGCGCACCTGACAAT 60.281 55.556 5.73 0.00 0.00 2.71
212 213 3.268603 CACACGCGCACCTGACAA 61.269 61.111 5.73 0.00 0.00 3.18
221 222 3.737172 AAATCTGCCCACACGCGC 61.737 61.111 5.73 0.00 0.00 6.86
222 223 2.176546 CAAATCTGCCCACACGCG 59.823 61.111 3.53 3.53 0.00 6.01
223 224 2.126346 GCAAATCTGCCCACACGC 60.126 61.111 0.00 0.00 43.26 5.34
224 225 2.176546 CGCAAATCTGCCCACACG 59.823 61.111 0.00 0.00 46.56 4.49
225 226 1.315257 ATCCGCAAATCTGCCCACAC 61.315 55.000 0.00 0.00 46.56 3.82
226 227 0.611618 AATCCGCAAATCTGCCCACA 60.612 50.000 0.00 0.00 46.56 4.17
227 228 0.532115 AAATCCGCAAATCTGCCCAC 59.468 50.000 0.00 0.00 46.56 4.61
228 229 1.067000 CAAAATCCGCAAATCTGCCCA 60.067 47.619 0.00 0.00 46.56 5.36
229 230 1.066929 ACAAAATCCGCAAATCTGCCC 60.067 47.619 0.00 0.00 46.56 5.36
230 231 2.094545 AGACAAAATCCGCAAATCTGCC 60.095 45.455 0.00 0.00 46.56 4.85
231 232 3.174375 GAGACAAAATCCGCAAATCTGC 58.826 45.455 0.00 0.00 45.75 4.26
232 233 3.125146 TCGAGACAAAATCCGCAAATCTG 59.875 43.478 0.00 0.00 0.00 2.90
233 234 3.125316 GTCGAGACAAAATCCGCAAATCT 59.875 43.478 0.00 0.00 0.00 2.40
234 235 3.417185 GTCGAGACAAAATCCGCAAATC 58.583 45.455 0.00 0.00 0.00 2.17
235 236 2.161609 GGTCGAGACAAAATCCGCAAAT 59.838 45.455 5.55 0.00 0.00 2.32
236 237 1.533731 GGTCGAGACAAAATCCGCAAA 59.466 47.619 5.55 0.00 0.00 3.68
237 238 1.153353 GGTCGAGACAAAATCCGCAA 58.847 50.000 5.55 0.00 0.00 4.85
238 239 1.011968 CGGTCGAGACAAAATCCGCA 61.012 55.000 5.55 0.00 0.00 5.69
239 240 0.734942 TCGGTCGAGACAAAATCCGC 60.735 55.000 5.55 0.00 38.18 5.54
240 241 1.852895 GATCGGTCGAGACAAAATCCG 59.147 52.381 5.55 0.76 39.40 4.18
259 260 2.399511 TACGTTCCGTCGCAAACCGA 62.400 55.000 0.00 0.00 45.15 4.69
260 261 2.015627 TACGTTCCGTCGCAAACCG 61.016 57.895 0.00 0.00 41.54 4.44
261 262 1.214373 TGTACGTTCCGTCGCAAACC 61.214 55.000 0.00 0.00 41.54 3.27
262 263 0.160182 CTGTACGTTCCGTCGCAAAC 59.840 55.000 0.00 0.00 41.54 2.93
263 264 0.940519 CCTGTACGTTCCGTCGCAAA 60.941 55.000 0.00 0.00 41.54 3.68
264 265 1.372004 CCTGTACGTTCCGTCGCAA 60.372 57.895 0.00 0.00 41.54 4.85
265 266 2.256158 CCTGTACGTTCCGTCGCA 59.744 61.111 0.00 0.00 41.54 5.10
266 267 1.799121 GTCCTGTACGTTCCGTCGC 60.799 63.158 0.00 0.00 41.54 5.19
267 268 1.154150 GGTCCTGTACGTTCCGTCG 60.154 63.158 0.00 0.00 41.54 5.12
268 269 0.387750 GTGGTCCTGTACGTTCCGTC 60.388 60.000 0.00 0.00 41.54 4.79
269 270 1.662044 GTGGTCCTGTACGTTCCGT 59.338 57.895 0.00 0.00 44.35 4.69
270 271 1.443194 CGTGGTCCTGTACGTTCCG 60.443 63.158 0.00 0.00 35.70 4.30
271 272 0.109412 CTCGTGGTCCTGTACGTTCC 60.109 60.000 0.00 0.00 40.87 3.62
272 273 0.109412 CCTCGTGGTCCTGTACGTTC 60.109 60.000 0.00 0.00 40.87 3.95
273 274 1.530013 CCCTCGTGGTCCTGTACGTT 61.530 60.000 0.00 0.00 40.87 3.99
274 275 1.975407 CCCTCGTGGTCCTGTACGT 60.975 63.158 2.33 0.00 40.87 3.57
275 276 2.882876 CCCTCGTGGTCCTGTACG 59.117 66.667 2.33 0.00 41.38 3.67
284 285 0.038159 GTCACTCTTCACCCTCGTGG 60.038 60.000 0.00 0.00 40.65 4.94
285 286 0.387367 CGTCACTCTTCACCCTCGTG 60.387 60.000 0.00 0.00 41.72 4.35
286 287 1.957562 CGTCACTCTTCACCCTCGT 59.042 57.895 0.00 0.00 0.00 4.18
287 288 1.444553 GCGTCACTCTTCACCCTCG 60.445 63.158 0.00 0.00 0.00 4.63
288 289 0.389166 CAGCGTCACTCTTCACCCTC 60.389 60.000 0.00 0.00 0.00 4.30
289 290 0.827925 TCAGCGTCACTCTTCACCCT 60.828 55.000 0.00 0.00 0.00 4.34
290 291 0.667792 GTCAGCGTCACTCTTCACCC 60.668 60.000 0.00 0.00 0.00 4.61
291 292 1.004277 CGTCAGCGTCACTCTTCACC 61.004 60.000 0.00 0.00 0.00 4.02
292 293 1.609840 GCGTCAGCGTCACTCTTCAC 61.610 60.000 0.00 0.00 40.81 3.18
293 294 1.371758 GCGTCAGCGTCACTCTTCA 60.372 57.895 0.00 0.00 40.81 3.02
294 295 2.089349 GGCGTCAGCGTCACTCTTC 61.089 63.158 0.00 0.00 46.35 2.87
295 296 2.049063 GGCGTCAGCGTCACTCTT 60.049 61.111 0.00 0.00 46.35 2.85
296 297 2.986413 AGGCGTCAGCGTCACTCT 60.986 61.111 0.00 0.00 46.51 3.24
302 303 3.805307 CGAGAGAGGCGTCAGCGT 61.805 66.667 9.41 0.00 46.35 5.07
304 305 3.821055 AGCGAGAGAGGCGTCAGC 61.821 66.667 9.41 8.39 44.18 4.26
305 306 2.101965 CAGCGAGAGAGGCGTCAG 59.898 66.667 9.41 0.00 35.00 3.51
306 307 4.121669 GCAGCGAGAGAGGCGTCA 62.122 66.667 9.41 0.00 35.00 4.35
313 314 1.371758 GTTGACACGCAGCGAGAGA 60.372 57.895 24.65 2.61 0.00 3.10
324 325 2.945668 AGCTTCAAGAGGTTGTTGACAC 59.054 45.455 0.00 0.00 33.63 3.67
334 335 2.154854 TTCGTGTCAGCTTCAAGAGG 57.845 50.000 0.00 0.00 0.00 3.69
338 339 2.223157 CGGTTTTTCGTGTCAGCTTCAA 60.223 45.455 0.00 0.00 0.00 2.69
346 347 2.166584 CTCCGCCGGTTTTTCGTGTC 62.167 60.000 1.63 0.00 0.00 3.67
347 348 2.203042 TCCGCCGGTTTTTCGTGT 60.203 55.556 1.63 0.00 0.00 4.49
348 349 2.554272 CTCCGCCGGTTTTTCGTG 59.446 61.111 1.63 0.00 0.00 4.35
349 350 2.663423 TTCCTCCGCCGGTTTTTCGT 62.663 55.000 1.63 0.00 0.00 3.85
350 351 1.508808 TTTCCTCCGCCGGTTTTTCG 61.509 55.000 1.63 0.00 0.00 3.46
351 352 0.669619 TTTTCCTCCGCCGGTTTTTC 59.330 50.000 1.63 0.00 0.00 2.29
357 359 3.053896 GGTGTTTTCCTCCGCCGG 61.054 66.667 0.00 0.00 0.00 6.13
359 361 3.982829 GAGGTGTTTTCCTCCGCC 58.017 61.111 1.70 0.00 45.84 6.13
373 375 1.084370 GCGAAGGTGGAATGTCGAGG 61.084 60.000 0.00 0.00 35.54 4.63
381 383 1.270412 ACGTACAATGCGAAGGTGGAA 60.270 47.619 0.00 0.00 0.00 3.53
382 384 0.319083 ACGTACAATGCGAAGGTGGA 59.681 50.000 0.00 0.00 0.00 4.02
383 385 1.657094 GTACGTACAATGCGAAGGTGG 59.343 52.381 20.67 0.00 0.00 4.61
384 386 1.319374 CGTACGTACAATGCGAAGGTG 59.681 52.381 24.50 0.81 0.00 4.00
386 388 0.918619 CCGTACGTACAATGCGAAGG 59.081 55.000 24.50 11.42 0.00 3.46
387 389 0.918619 CCCGTACGTACAATGCGAAG 59.081 55.000 24.50 6.30 0.00 3.79
390 392 2.852087 CGCCCGTACGTACAATGCG 61.852 63.158 27.42 27.42 33.27 4.73
392 394 4.481870 ACGCCCGTACGTACAATG 57.518 55.556 24.50 13.03 46.19 2.82
419 421 2.743928 GAACGGCAGGCAGACAGG 60.744 66.667 0.00 0.00 0.00 4.00
420 422 3.114616 CGAACGGCAGGCAGACAG 61.115 66.667 0.00 0.00 0.00 3.51
421 423 3.858868 GACGAACGGCAGGCAGACA 62.859 63.158 0.00 0.00 0.00 3.41
424 426 2.357517 AAGACGAACGGCAGGCAG 60.358 61.111 2.25 0.00 0.00 4.85
425 427 2.357034 GAAGACGAACGGCAGGCA 60.357 61.111 2.25 0.00 0.00 4.75
426 428 2.357034 TGAAGACGAACGGCAGGC 60.357 61.111 2.25 0.00 0.00 4.85
427 429 0.242825 TAGTGAAGACGAACGGCAGG 59.757 55.000 2.25 0.00 0.00 4.85
432 434 2.056577 GGTTGGTAGTGAAGACGAACG 58.943 52.381 0.00 0.00 36.65 3.95
458 460 1.375396 TCCATGTACACTGCACGGC 60.375 57.895 0.00 0.00 0.00 5.68
460 462 1.955529 GCGTCCATGTACACTGCACG 61.956 60.000 13.84 13.84 0.00 5.34
478 481 1.077501 TGCATGGCTTCAGGGTAGC 60.078 57.895 0.00 0.00 37.91 3.58
580 583 0.395311 ATGCATGCTCCCTGTTCCTG 60.395 55.000 20.33 0.00 0.00 3.86
581 584 0.333993 AATGCATGCTCCCTGTTCCT 59.666 50.000 20.33 0.00 0.00 3.36
582 585 2.057137 TAATGCATGCTCCCTGTTCC 57.943 50.000 20.33 0.00 0.00 3.62
583 586 3.736126 GCTTTAATGCATGCTCCCTGTTC 60.736 47.826 20.33 0.00 0.00 3.18
627 630 2.514013 GCGTACGATGGACTTGGCG 61.514 63.158 21.65 0.00 0.00 5.69
668 674 1.537202 GAAACAGTGGCTCATGTGTCC 59.463 52.381 0.00 0.00 28.95 4.02
710 728 0.450583 CTGTGCTGCATCATGTGTCC 59.549 55.000 5.27 0.00 0.00 4.02
738 757 3.137533 GGTGTAGGAGTACTAGCGGTAG 58.862 54.545 19.71 19.71 30.77 3.18
752 771 0.460987 GCTGCTGCTAGTGGTGTAGG 60.461 60.000 8.53 0.00 36.03 3.18
754 773 0.684535 TTGCTGCTGCTAGTGGTGTA 59.315 50.000 17.00 0.00 40.48 2.90
755 774 0.179020 TTTGCTGCTGCTAGTGGTGT 60.179 50.000 17.00 0.00 40.48 4.16
757 776 0.607489 CCTTTGCTGCTGCTAGTGGT 60.607 55.000 17.00 0.00 40.48 4.16
758 777 0.607489 ACCTTTGCTGCTGCTAGTGG 60.607 55.000 17.00 15.75 40.48 4.00
782 801 3.781162 GTTCGGCCGTGCGGTAAC 61.781 66.667 27.15 17.09 37.65 2.50
795 825 3.484065 GCCTAAAAATAACCGACCGTTCG 60.484 47.826 0.00 0.00 45.44 3.95
826 856 3.634910 CGGACAAGGAAAGGAAAAGGAAA 59.365 43.478 0.00 0.00 0.00 3.13
827 857 3.219281 CGGACAAGGAAAGGAAAAGGAA 58.781 45.455 0.00 0.00 0.00 3.36
828 858 2.488347 CCGGACAAGGAAAGGAAAAGGA 60.488 50.000 0.00 0.00 0.00 3.36
829 859 1.886542 CCGGACAAGGAAAGGAAAAGG 59.113 52.381 0.00 0.00 0.00 3.11
830 860 1.269723 GCCGGACAAGGAAAGGAAAAG 59.730 52.381 5.05 0.00 0.00 2.27
831 861 1.324383 GCCGGACAAGGAAAGGAAAA 58.676 50.000 5.05 0.00 0.00 2.29
832 862 0.183971 TGCCGGACAAGGAAAGGAAA 59.816 50.000 5.05 0.00 0.00 3.13
833 863 0.250727 CTGCCGGACAAGGAAAGGAA 60.251 55.000 5.05 0.00 0.00 3.36
834 864 1.125093 TCTGCCGGACAAGGAAAGGA 61.125 55.000 5.05 0.00 0.00 3.36
835 865 0.955919 GTCTGCCGGACAAGGAAAGG 60.956 60.000 5.05 0.00 43.94 3.11
836 866 2.544726 GTCTGCCGGACAAGGAAAG 58.455 57.895 5.05 0.00 43.94 2.62
860 890 1.195448 CCGCGAATCTATGGCATTCAC 59.805 52.381 8.23 0.00 31.53 3.18
862 892 0.166814 GCCGCGAATCTATGGCATTC 59.833 55.000 8.23 0.00 46.76 2.67
868 898 0.776451 GTACGTGCCGCGAATCTATG 59.224 55.000 8.23 0.00 44.77 2.23
902 933 1.066358 ACGAAGGTGGCTAGCTAAACC 60.066 52.381 20.46 20.46 33.49 3.27
910 941 1.338674 CCATGTGAACGAAGGTGGCTA 60.339 52.381 0.00 0.00 0.00 3.93
912 943 1.875963 CCATGTGAACGAAGGTGGC 59.124 57.895 0.00 0.00 0.00 5.01
914 945 1.497278 CGCCATGTGAACGAAGGTG 59.503 57.895 0.00 0.00 0.00 4.00
915 946 1.671054 CCGCCATGTGAACGAAGGT 60.671 57.895 0.00 0.00 0.00 3.50
916 947 1.375396 TCCGCCATGTGAACGAAGG 60.375 57.895 0.00 0.00 0.00 3.46
918 949 1.069935 TGTCCGCCATGTGAACGAA 59.930 52.632 0.00 0.00 0.00 3.85
919 950 1.666553 GTGTCCGCCATGTGAACGA 60.667 57.895 0.00 0.00 0.00 3.85
921 952 2.860293 CGTGTCCGCCATGTGAAC 59.140 61.111 0.00 0.00 0.00 3.18
961 1000 0.881600 AACCAACCGTTGCGAGGTAC 60.882 55.000 5.68 0.00 41.95 3.34
962 1001 0.881159 CAACCAACCGTTGCGAGGTA 60.881 55.000 5.68 0.00 45.16 3.08
963 1002 2.184167 CAACCAACCGTTGCGAGGT 61.184 57.895 5.68 0.00 45.16 3.85
997 1037 0.529555 GTGATTCTCGGAGCTGGCTC 60.530 60.000 13.56 13.56 42.04 4.70
998 1038 1.519719 GTGATTCTCGGAGCTGGCT 59.480 57.895 0.00 0.00 0.00 4.75
999 1039 1.522580 GGTGATTCTCGGAGCTGGC 60.523 63.158 0.00 0.00 0.00 4.85
1000 1040 1.144936 GGGTGATTCTCGGAGCTGG 59.855 63.158 0.00 0.00 0.00 4.85
1001 1041 1.144936 GGGGTGATTCTCGGAGCTG 59.855 63.158 0.00 0.00 0.00 4.24
1002 1042 2.066999 GGGGGTGATTCTCGGAGCT 61.067 63.158 0.00 0.00 0.00 4.09
1003 1043 2.034048 GAGGGGGTGATTCTCGGAGC 62.034 65.000 0.00 0.00 0.00 4.70
1004 1044 0.397816 AGAGGGGGTGATTCTCGGAG 60.398 60.000 0.00 0.00 33.16 4.63
1005 1045 0.042731 AAGAGGGGGTGATTCTCGGA 59.957 55.000 0.00 0.00 33.16 4.55
1006 1046 0.179000 CAAGAGGGGGTGATTCTCGG 59.821 60.000 0.00 0.00 33.16 4.63
1120 1166 1.974343 CTCCCGGGCTATCTCTCCG 60.974 68.421 18.49 0.00 43.05 4.63
1122 1168 1.531840 TGCTCCCGGGCTATCTCTC 60.532 63.158 18.49 0.00 0.00 3.20
1183 1232 3.596066 TTGCTCTCTCTGGCGGCAC 62.596 63.158 7.97 0.00 32.47 5.01
1190 1239 1.141449 CGCCCTCTTGCTCTCTCTG 59.859 63.158 0.00 0.00 0.00 3.35
1222 1275 4.082245 GTGGGTGAATTCATTGGTTACCTG 60.082 45.833 12.12 0.00 0.00 4.00
1233 1286 0.323629 GAGGTCGGTGGGTGAATTCA 59.676 55.000 3.38 3.38 0.00 2.57
1235 1288 1.003233 GAAGAGGTCGGTGGGTGAATT 59.997 52.381 0.00 0.00 0.00 2.17
1257 1310 0.110486 AACCAATTCACAGCGGAGGT 59.890 50.000 0.00 0.00 41.48 3.85
1269 1322 2.427506 GAAGAGACGAGGCAACCAATT 58.572 47.619 0.00 0.00 37.17 2.32
1270 1323 1.339151 GGAAGAGACGAGGCAACCAAT 60.339 52.381 0.00 0.00 37.17 3.16
1271 1324 0.034896 GGAAGAGACGAGGCAACCAA 59.965 55.000 0.00 0.00 37.17 3.67
1272 1325 1.118965 TGGAAGAGACGAGGCAACCA 61.119 55.000 0.00 0.00 37.17 3.67
1273 1326 0.390472 CTGGAAGAGACGAGGCAACC 60.390 60.000 0.00 0.00 34.07 3.77
1274 1327 0.603569 TCTGGAAGAGACGAGGCAAC 59.396 55.000 0.00 0.00 38.67 4.17
1275 1328 3.051617 TCTGGAAGAGACGAGGCAA 57.948 52.632 0.00 0.00 38.67 4.52
1276 1329 4.843624 TCTGGAAGAGACGAGGCA 57.156 55.556 0.00 0.00 38.67 4.75
1286 1339 2.736400 GCGGGCAAAAATCATCTGGAAG 60.736 50.000 0.00 0.00 0.00 3.46
1287 1340 1.204467 GCGGGCAAAAATCATCTGGAA 59.796 47.619 0.00 0.00 0.00 3.53
1288 1341 0.817013 GCGGGCAAAAATCATCTGGA 59.183 50.000 0.00 0.00 0.00 3.86
1289 1342 0.531657 TGCGGGCAAAAATCATCTGG 59.468 50.000 0.00 0.00 0.00 3.86
1290 1343 2.589798 ATGCGGGCAAAAATCATCTG 57.410 45.000 0.00 0.00 0.00 2.90
1291 1344 3.615224 AAATGCGGGCAAAAATCATCT 57.385 38.095 0.00 0.00 0.00 2.90
1292 1345 4.683501 AAAAATGCGGGCAAAAATCATC 57.316 36.364 0.00 0.00 0.00 2.92
1327 1380 1.267121 AGACTAAGGTGGACGCATGT 58.733 50.000 0.00 0.00 0.00 3.21
1389 1460 5.220643 CCTTTGTTTCTTGCCATGTTTGAAC 60.221 40.000 0.00 0.00 0.00 3.18
1391 1462 4.440880 CCTTTGTTTCTTGCCATGTTTGA 58.559 39.130 0.00 0.00 0.00 2.69
1414 1485 4.619140 GCCGAATGGATGCTGCGC 62.619 66.667 0.00 0.00 37.49 6.09
1746 1851 3.041940 CTGGAACGGACGGCACAC 61.042 66.667 0.00 0.00 36.31 3.82
1750 1855 4.452733 CTCCCTGGAACGGACGGC 62.453 72.222 0.00 0.00 36.31 5.68
1751 1856 3.771160 CCTCCCTGGAACGGACGG 61.771 72.222 0.00 0.00 38.35 4.79
2096 2201 3.330720 ACCTCCTTGGCCCCTTCG 61.331 66.667 0.00 0.00 40.22 3.79
2166 2271 4.987408 TTACAGCATTGGATTGGATGTG 57.013 40.909 0.00 0.00 32.80 3.21
2190 2295 3.568007 GGCAGAAAGTACACATCAAACCA 59.432 43.478 0.00 0.00 0.00 3.67
2191 2296 3.821033 AGGCAGAAAGTACACATCAAACC 59.179 43.478 0.00 0.00 0.00 3.27
2201 2306 1.238439 TGCAAGCAGGCAGAAAGTAC 58.762 50.000 0.00 0.00 39.25 2.73
2202 2307 3.723772 TGCAAGCAGGCAGAAAGTA 57.276 47.368 0.00 0.00 39.25 2.24
2203 2308 4.585070 TGCAAGCAGGCAGAAAGT 57.415 50.000 0.00 0.00 39.25 2.66
2371 2485 1.288127 GCAGGCAAAGCAGACCAAG 59.712 57.895 0.00 0.00 0.00 3.61
2377 2491 0.730494 GTTAAGCGCAGGCAAAGCAG 60.730 55.000 11.47 0.00 43.41 4.24
2385 2499 3.799755 GCACGGGTTAAGCGCAGG 61.800 66.667 11.47 0.00 0.00 4.85
2398 2512 0.600255 AAGACCCGAAACAGAGCACG 60.600 55.000 0.00 0.00 0.00 5.34
2487 2601 2.438614 CGGAGCTGAGGAGGTCGA 60.439 66.667 0.00 0.00 46.08 4.20
2488 2602 2.438614 TCGGAGCTGAGGAGGTCG 60.439 66.667 0.00 0.00 46.08 4.79
2533 2647 2.093658 GCAGTTTTATCTCACCTCCGGA 60.094 50.000 2.93 2.93 0.00 5.14
2595 2710 6.183360 ACCATGAGTAGGATGAACTCTGAATC 60.183 42.308 0.00 0.00 43.13 2.52
2596 2711 5.664908 ACCATGAGTAGGATGAACTCTGAAT 59.335 40.000 0.00 0.00 43.13 2.57
2597 2712 5.026121 ACCATGAGTAGGATGAACTCTGAA 58.974 41.667 0.00 0.00 43.13 3.02
2684 2799 0.035915 GGCCTTTGTCCCTCAGAGTC 60.036 60.000 0.00 0.00 0.00 3.36
2763 2883 4.014569 TCCATTTTCGGTGATTCAGTGA 57.985 40.909 0.00 0.00 0.00 3.41
2773 2893 5.562696 CGCATATGCTATTTCCATTTTCGGT 60.563 40.000 24.56 0.00 39.32 4.69
2780 2900 2.751259 CCTGCGCATATGCTATTTCCAT 59.249 45.455 24.56 0.00 39.32 3.41
2803 2923 2.162408 GCAGTAATGAACCAGTTGAGCC 59.838 50.000 0.00 0.00 0.00 4.70
2824 2944 4.501559 CACAACACAAATGAGTGAGCAAAG 59.498 41.667 4.93 0.00 42.05 2.77
2829 2949 2.358582 TGGCACAACACAAATGAGTGAG 59.641 45.455 4.93 0.65 42.50 3.51
2954 3074 2.362397 ACATGAATGACTACCGATCGCT 59.638 45.455 10.32 0.00 0.00 4.93
2955 3075 2.743938 ACATGAATGACTACCGATCGC 58.256 47.619 10.32 0.00 0.00 4.58
2983 3104 5.509670 GGAGGCTAAGAACACAAGCAAATTT 60.510 40.000 0.00 0.00 38.01 1.82
2990 3111 3.070018 CACAGGAGGCTAAGAACACAAG 58.930 50.000 0.00 0.00 0.00 3.16
3002 3123 1.160137 CTGCAGTTTACACAGGAGGC 58.840 55.000 5.25 0.00 0.00 4.70
3165 3286 2.046892 TGCGCAGAAGGAGAAGCC 60.047 61.111 5.66 0.00 0.00 4.35
3186 3314 0.606096 TTCCTGCCAGATCGACGAAA 59.394 50.000 0.00 0.00 0.00 3.46
3192 3320 1.363744 GTTCACTTCCTGCCAGATCG 58.636 55.000 0.00 0.00 0.00 3.69
3363 3493 2.295885 GCTGCATCAGAAGCCAACTAT 58.704 47.619 0.00 0.00 40.87 2.12
3386 3516 1.133915 GGGATATGGCCGTTTCTTCCA 60.134 52.381 14.18 0.00 0.00 3.53
3389 3519 1.222567 AGGGGATATGGCCGTTTCTT 58.777 50.000 14.18 0.00 0.00 2.52
3435 3565 1.089920 CCTCCCAAAGACGATTGCAG 58.910 55.000 0.00 0.00 0.00 4.41
3440 3570 0.673644 CGTTGCCTCCCAAAGACGAT 60.674 55.000 0.00 0.00 35.29 3.73
3587 3717 2.076100 TGCTTCACTAATGCCTTGTCG 58.924 47.619 0.00 0.00 0.00 4.35
3768 3898 6.708054 AGGTGATTATTGTGAATGTAGCTAGC 59.292 38.462 6.62 6.62 0.00 3.42
4249 4380 1.416030 TGTACTTCCTTGCAGTGCTCA 59.584 47.619 17.60 1.78 0.00 4.26
4282 4413 5.455326 GCTTATCCTTTCTCTGAGCCCATTA 60.455 44.000 0.00 0.00 0.00 1.90
4333 4464 2.368875 TCTCTCCTTTTCAGGCGTTTCT 59.631 45.455 0.00 0.00 40.58 2.52
4404 4535 3.570975 TGCTGTCTTTGTGATGCTTTCAT 59.429 39.130 0.00 0.00 36.54 2.57
4484 4615 3.328382 TGGTTCCTCATCAACGTTAGG 57.672 47.619 8.31 8.31 0.00 2.69
4490 4621 1.478105 GGCCAATGGTTCCTCATCAAC 59.522 52.381 0.00 0.00 0.00 3.18
4495 4626 1.139498 TCAGGGCCAATGGTTCCTCA 61.139 55.000 6.18 0.00 0.00 3.86
4546 4677 0.689623 AACTGCTGCTCCTTGCTAGT 59.310 50.000 0.00 0.00 43.37 2.57
4675 4806 4.325119 GAAACAGGTTCCTCCTTACCTTC 58.675 47.826 0.00 0.00 45.67 3.46
4676 4807 4.368565 GAAACAGGTTCCTCCTTACCTT 57.631 45.455 0.00 0.00 45.67 3.50
4717 4848 3.027170 GCTGTTGTCGGTGATGGCG 62.027 63.158 0.00 0.00 0.00 5.69
4744 4926 1.605710 GCAGCACTTTCTTCTTCAGCA 59.394 47.619 0.00 0.00 0.00 4.41
4766 4948 2.027073 TCACGCGGCTTGTGTCATC 61.027 57.895 12.47 0.00 39.94 2.92
4783 4965 2.615912 AGTTTGCTGCTTCACTTCAGTC 59.384 45.455 0.00 0.00 33.09 3.51
4842 5024 1.136147 GAATCTGTGCCAGCTTGCG 59.864 57.895 5.19 0.00 0.00 4.85
4888 5070 2.649531 AATCAAAGGACCACCGTGAA 57.350 45.000 0.00 0.00 41.83 3.18
4922 5104 2.471818 CCACAGCTCGATGATCTCTTG 58.528 52.381 0.00 0.00 0.00 3.02
5008 5190 5.080337 TCTACCTCCATGTAGATGTGATCC 58.920 45.833 0.00 0.00 41.67 3.36
5125 5307 2.673368 GGATAAGCTGAAGGTGTGTTCG 59.327 50.000 0.00 0.00 0.00 3.95
5160 5342 9.491675 ACAAGAATCAATTTGTGCAATTCATTA 57.508 25.926 7.55 0.00 36.26 1.90
5174 5356 8.891671 AACTGCAACAATAACAAGAATCAATT 57.108 26.923 0.00 0.00 0.00 2.32
5240 5422 1.293924 CGCTAAGCTTCCTCACCATG 58.706 55.000 0.00 0.00 0.00 3.66
5297 5479 0.246635 GTTGCTTAGAGCTCCGGTCA 59.753 55.000 10.93 0.92 42.97 4.02
5381 5563 0.370273 CCATTTCCGAAACGAGCTCG 59.630 55.000 33.45 33.45 46.33 5.03
5476 5658 0.620556 TCCACCCCAGCTGAAAGATC 59.379 55.000 17.39 0.00 34.07 2.75
5496 5678 2.111384 TCTCACAGACCAGGATTAGGC 58.889 52.381 0.00 0.00 0.00 3.93
5507 5689 3.057876 AGTCATCAACTCGTCTCACAGAC 60.058 47.826 0.00 0.00 41.71 3.51
5508 5690 3.149981 AGTCATCAACTCGTCTCACAGA 58.850 45.455 0.00 0.00 30.02 3.41
5509 5691 3.567576 AGTCATCAACTCGTCTCACAG 57.432 47.619 0.00 0.00 30.02 3.66
5510 5692 3.317993 TCAAGTCATCAACTCGTCTCACA 59.682 43.478 0.00 0.00 37.17 3.58
5581 5763 1.539065 CGATGTGAATTCCTCTCCCGG 60.539 57.143 2.27 0.00 0.00 5.73
5637 5820 8.044060 TCAGAAAATTTAGTCACCTGCATAAG 57.956 34.615 0.00 0.00 0.00 1.73
5672 5863 3.327757 TGTCTAGTTGGTTCAGCTTCCAT 59.672 43.478 3.35 0.00 33.50 3.41
5675 5866 4.214332 CCTTTGTCTAGTTGGTTCAGCTTC 59.786 45.833 0.00 0.00 0.00 3.86
5678 5869 2.814336 CCCTTTGTCTAGTTGGTTCAGC 59.186 50.000 0.00 0.00 0.00 4.26
5679 5870 4.351874 TCCCTTTGTCTAGTTGGTTCAG 57.648 45.455 0.00 0.00 0.00 3.02
5689 5880 4.502105 TTAGCATGCATCCCTTTGTCTA 57.498 40.909 21.98 0.00 0.00 2.59
5735 6209 8.093307 AGATGCATACACTGATCAGGTAAATAG 58.907 37.037 26.08 15.45 0.00 1.73
5741 6217 7.730672 ATATAGATGCATACACTGATCAGGT 57.269 36.000 26.08 21.14 0.00 4.00
5761 6237 6.992123 CAGTCCTTCTGTTGGCACAATATATA 59.008 38.462 0.00 0.00 38.34 0.86
5762 6238 5.824624 CAGTCCTTCTGTTGGCACAATATAT 59.175 40.000 0.00 0.00 38.34 0.86
5804 6286 8.861101 GGTCATATTAGTTACGATGATTACAGC 58.139 37.037 0.00 0.00 31.35 4.40
5805 6287 9.908152 TGGTCATATTAGTTACGATGATTACAG 57.092 33.333 0.00 0.00 31.35 2.74
5806 6288 9.687210 GTGGTCATATTAGTTACGATGATTACA 57.313 33.333 0.00 0.00 31.35 2.41
5807 6289 9.909644 AGTGGTCATATTAGTTACGATGATTAC 57.090 33.333 0.00 0.00 31.35 1.89
5809 6291 9.477484 GAAGTGGTCATATTAGTTACGATGATT 57.523 33.333 0.00 0.00 31.35 2.57
5810 6292 8.638873 TGAAGTGGTCATATTAGTTACGATGAT 58.361 33.333 0.00 0.00 31.35 2.45
5811 6293 8.002984 TGAAGTGGTCATATTAGTTACGATGA 57.997 34.615 0.00 0.00 0.00 2.92
5812 6294 8.642908 TTGAAGTGGTCATATTAGTTACGATG 57.357 34.615 0.00 0.00 35.70 3.84
5813 6295 7.438459 GCTTGAAGTGGTCATATTAGTTACGAT 59.562 37.037 0.00 0.00 35.70 3.73
5814 6296 6.755141 GCTTGAAGTGGTCATATTAGTTACGA 59.245 38.462 0.00 0.00 35.70 3.43
5815 6297 6.757010 AGCTTGAAGTGGTCATATTAGTTACG 59.243 38.462 0.00 0.00 35.70 3.18
5816 6298 8.494016 AAGCTTGAAGTGGTCATATTAGTTAC 57.506 34.615 0.00 0.00 35.70 2.50
5819 6301 9.988815 CTATAAGCTTGAAGTGGTCATATTAGT 57.011 33.333 9.86 0.00 35.70 2.24
5820 6302 8.930760 GCTATAAGCTTGAAGTGGTCATATTAG 58.069 37.037 9.86 0.00 38.45 1.73
5821 6303 8.833231 GCTATAAGCTTGAAGTGGTCATATTA 57.167 34.615 9.86 0.00 38.45 0.98
5822 6304 7.736447 GCTATAAGCTTGAAGTGGTCATATT 57.264 36.000 9.86 0.00 38.45 1.28
5838 6320 7.222224 ACTGTACATTTACGACAAGCTATAAGC 59.778 37.037 0.00 0.00 42.84 3.09
5839 6321 8.630278 ACTGTACATTTACGACAAGCTATAAG 57.370 34.615 0.00 0.00 0.00 1.73
5840 6322 8.464404 AGACTGTACATTTACGACAAGCTATAA 58.536 33.333 0.00 0.00 0.00 0.98
5841 6323 7.993101 AGACTGTACATTTACGACAAGCTATA 58.007 34.615 0.00 0.00 0.00 1.31
5842 6324 6.864342 AGACTGTACATTTACGACAAGCTAT 58.136 36.000 0.00 0.00 0.00 2.97
5843 6325 6.263516 AGACTGTACATTTACGACAAGCTA 57.736 37.500 0.00 0.00 0.00 3.32
5844 6326 5.135508 AGACTGTACATTTACGACAAGCT 57.864 39.130 0.00 0.00 0.00 3.74
5845 6327 6.508088 GCATAGACTGTACATTTACGACAAGC 60.508 42.308 0.00 0.00 0.00 4.01
5846 6328 6.752351 AGCATAGACTGTACATTTACGACAAG 59.248 38.462 0.00 0.00 0.00 3.16
5847 6329 6.530181 CAGCATAGACTGTACATTTACGACAA 59.470 38.462 0.00 0.00 32.78 3.18
5848 6330 6.033966 CAGCATAGACTGTACATTTACGACA 58.966 40.000 0.00 0.00 32.78 4.35
5849 6331 5.459107 CCAGCATAGACTGTACATTTACGAC 59.541 44.000 0.00 0.00 35.83 4.34
5850 6332 5.358725 TCCAGCATAGACTGTACATTTACGA 59.641 40.000 0.00 0.00 35.83 3.43
5851 6333 5.588240 TCCAGCATAGACTGTACATTTACG 58.412 41.667 0.00 0.00 35.83 3.18
5852 6334 6.073548 GCATCCAGCATAGACTGTACATTTAC 60.074 42.308 0.00 0.00 44.79 2.01
5853 6335 5.991606 GCATCCAGCATAGACTGTACATTTA 59.008 40.000 0.00 0.00 44.79 1.40
5854 6336 4.818546 GCATCCAGCATAGACTGTACATTT 59.181 41.667 0.00 0.00 44.79 2.32
5855 6337 4.384056 GCATCCAGCATAGACTGTACATT 58.616 43.478 0.00 0.00 44.79 2.71
5856 6338 4.000331 GCATCCAGCATAGACTGTACAT 58.000 45.455 0.00 0.00 44.79 2.29
5857 6339 3.459232 GCATCCAGCATAGACTGTACA 57.541 47.619 0.00 0.00 44.79 2.90
5869 6351 4.853050 AGGCTCGCAGCATCCAGC 62.853 66.667 9.78 0.00 44.75 4.85
5870 6352 2.895865 CAGGCTCGCAGCATCCAG 60.896 66.667 9.78 0.00 44.75 3.86
5884 6366 1.805945 GTCAAGTACGCCTCGCAGG 60.806 63.158 0.00 0.00 38.80 4.85
5885 6367 1.805945 GGTCAAGTACGCCTCGCAG 60.806 63.158 0.00 0.00 0.00 5.18
5886 6368 2.260434 GGTCAAGTACGCCTCGCA 59.740 61.111 0.00 0.00 0.00 5.10
5887 6369 2.879462 CGGTCAAGTACGCCTCGC 60.879 66.667 0.00 0.00 0.00 5.03
5893 6375 1.864711 CCCATATTGCGGTCAAGTACG 59.135 52.381 0.00 0.00 35.37 3.67
5894 6376 2.914059 ACCCATATTGCGGTCAAGTAC 58.086 47.619 0.00 0.00 35.37 2.73
5895 6377 3.275143 CAACCCATATTGCGGTCAAGTA 58.725 45.455 0.00 0.00 35.37 2.24
5896 6378 2.091541 CAACCCATATTGCGGTCAAGT 58.908 47.619 0.00 0.00 35.37 3.16
5897 6379 2.091541 ACAACCCATATTGCGGTCAAG 58.908 47.619 0.00 0.00 35.37 3.02
5898 6380 1.815613 CACAACCCATATTGCGGTCAA 59.184 47.619 0.00 0.00 36.51 3.18
5899 6381 1.003696 TCACAACCCATATTGCGGTCA 59.996 47.619 0.00 0.00 32.47 4.02
5900 6382 1.400494 GTCACAACCCATATTGCGGTC 59.600 52.381 0.00 0.00 32.47 4.79
5901 6383 1.459450 GTCACAACCCATATTGCGGT 58.541 50.000 0.00 0.00 32.47 5.68
5902 6384 0.376852 CGTCACAACCCATATTGCGG 59.623 55.000 0.00 0.00 32.47 5.69
5903 6385 0.376852 CCGTCACAACCCATATTGCG 59.623 55.000 0.00 0.00 32.47 4.85
5904 6386 0.738389 CCCGTCACAACCCATATTGC 59.262 55.000 0.00 0.00 32.47 3.56
5905 6387 2.122783 ACCCGTCACAACCCATATTG 57.877 50.000 0.00 0.00 35.59 1.90
5906 6388 2.841881 ACTACCCGTCACAACCCATATT 59.158 45.455 0.00 0.00 0.00 1.28
5907 6389 2.169769 CACTACCCGTCACAACCCATAT 59.830 50.000 0.00 0.00 0.00 1.78
5908 6390 1.551430 CACTACCCGTCACAACCCATA 59.449 52.381 0.00 0.00 0.00 2.74
5909 6391 0.323629 CACTACCCGTCACAACCCAT 59.676 55.000 0.00 0.00 0.00 4.00
5910 6392 1.749665 CACTACCCGTCACAACCCA 59.250 57.895 0.00 0.00 0.00 4.51
5911 6393 1.670083 GCACTACCCGTCACAACCC 60.670 63.158 0.00 0.00 0.00 4.11
5912 6394 1.070105 TGCACTACCCGTCACAACC 59.930 57.895 0.00 0.00 0.00 3.77
5913 6395 1.226030 GGTGCACTACCCGTCACAAC 61.226 60.000 17.98 0.00 44.15 3.32
5914 6396 1.070105 GGTGCACTACCCGTCACAA 59.930 57.895 17.98 0.00 44.15 3.33
5915 6397 2.738480 GGTGCACTACCCGTCACA 59.262 61.111 17.98 0.00 44.15 3.58
5923 6405 1.279271 AGGGAATGACAGGTGCACTAC 59.721 52.381 17.98 0.06 0.00 2.73
5924 6406 1.656587 AGGGAATGACAGGTGCACTA 58.343 50.000 17.98 0.00 0.00 2.74
5925 6407 0.773644 AAGGGAATGACAGGTGCACT 59.226 50.000 17.98 0.00 0.00 4.40
5926 6408 1.541588 GAAAGGGAATGACAGGTGCAC 59.458 52.381 8.80 8.80 0.00 4.57
5927 6409 1.547675 GGAAAGGGAATGACAGGTGCA 60.548 52.381 0.00 0.00 0.00 4.57
5928 6410 1.177401 GGAAAGGGAATGACAGGTGC 58.823 55.000 0.00 0.00 0.00 5.01
5929 6411 2.307098 AGAGGAAAGGGAATGACAGGTG 59.693 50.000 0.00 0.00 0.00 4.00
5930 6412 2.637165 AGAGGAAAGGGAATGACAGGT 58.363 47.619 0.00 0.00 0.00 4.00
5931 6413 3.245052 ACAAGAGGAAAGGGAATGACAGG 60.245 47.826 0.00 0.00 0.00 4.00
5932 6414 4.006319 GACAAGAGGAAAGGGAATGACAG 58.994 47.826 0.00 0.00 0.00 3.51
5933 6415 3.244911 GGACAAGAGGAAAGGGAATGACA 60.245 47.826 0.00 0.00 0.00 3.58
5934 6416 3.009584 AGGACAAGAGGAAAGGGAATGAC 59.990 47.826 0.00 0.00 0.00 3.06
5935 6417 3.260205 AGGACAAGAGGAAAGGGAATGA 58.740 45.455 0.00 0.00 0.00 2.57
5936 6418 3.265479 AGAGGACAAGAGGAAAGGGAATG 59.735 47.826 0.00 0.00 0.00 2.67
5937 6419 3.536287 AGAGGACAAGAGGAAAGGGAAT 58.464 45.455 0.00 0.00 0.00 3.01
5938 6420 2.991580 AGAGGACAAGAGGAAAGGGAA 58.008 47.619 0.00 0.00 0.00 3.97
5939 6421 2.723530 AGAGGACAAGAGGAAAGGGA 57.276 50.000 0.00 0.00 0.00 4.20
5940 6422 4.962995 TGTATAGAGGACAAGAGGAAAGGG 59.037 45.833 0.00 0.00 0.00 3.95
5941 6423 5.452636 GCTGTATAGAGGACAAGAGGAAAGG 60.453 48.000 0.00 0.00 0.00 3.11
5942 6424 5.362430 AGCTGTATAGAGGACAAGAGGAAAG 59.638 44.000 0.00 0.00 0.00 2.62
5943 6425 5.273208 AGCTGTATAGAGGACAAGAGGAAA 58.727 41.667 0.00 0.00 0.00 3.13
5944 6426 4.873010 AGCTGTATAGAGGACAAGAGGAA 58.127 43.478 0.00 0.00 0.00 3.36
5945 6427 4.528076 AGCTGTATAGAGGACAAGAGGA 57.472 45.455 0.00 0.00 0.00 3.71
5946 6428 5.830991 AGTTAGCTGTATAGAGGACAAGAGG 59.169 44.000 0.00 0.00 0.00 3.69
5947 6429 6.238897 CCAGTTAGCTGTATAGAGGACAAGAG 60.239 46.154 5.81 0.00 41.02 2.85
5948 6430 5.594725 CCAGTTAGCTGTATAGAGGACAAGA 59.405 44.000 5.81 0.00 41.02 3.02
5949 6431 5.361285 ACCAGTTAGCTGTATAGAGGACAAG 59.639 44.000 5.81 0.00 41.02 3.16
5950 6432 5.269991 ACCAGTTAGCTGTATAGAGGACAA 58.730 41.667 5.81 0.00 41.02 3.18
5951 6433 4.868268 ACCAGTTAGCTGTATAGAGGACA 58.132 43.478 5.81 0.00 41.02 4.02
5952 6434 5.452077 CCAACCAGTTAGCTGTATAGAGGAC 60.452 48.000 5.81 0.00 41.02 3.85
5953 6435 4.649674 CCAACCAGTTAGCTGTATAGAGGA 59.350 45.833 5.81 0.00 41.02 3.71
5954 6436 4.406003 ACCAACCAGTTAGCTGTATAGAGG 59.594 45.833 5.81 1.88 41.02 3.69
5955 6437 5.352284 CACCAACCAGTTAGCTGTATAGAG 58.648 45.833 5.81 0.00 41.02 2.43
5956 6438 4.382685 GCACCAACCAGTTAGCTGTATAGA 60.383 45.833 5.81 0.00 41.02 1.98
5957 6439 3.871594 GCACCAACCAGTTAGCTGTATAG 59.128 47.826 5.81 0.00 41.02 1.31
5958 6440 3.517901 AGCACCAACCAGTTAGCTGTATA 59.482 43.478 5.81 0.00 41.02 1.47
5959 6441 2.305927 AGCACCAACCAGTTAGCTGTAT 59.694 45.455 5.81 0.00 41.02 2.29
5960 6442 1.697432 AGCACCAACCAGTTAGCTGTA 59.303 47.619 5.81 0.00 41.02 2.74
5961 6443 0.474184 AGCACCAACCAGTTAGCTGT 59.526 50.000 5.81 0.00 41.02 4.40
5962 6444 0.877071 CAGCACCAACCAGTTAGCTG 59.123 55.000 13.69 13.69 42.69 4.24
5963 6445 0.474184 ACAGCACCAACCAGTTAGCT 59.526 50.000 0.00 0.00 0.00 3.32
5964 6446 1.804748 GTACAGCACCAACCAGTTAGC 59.195 52.381 0.00 0.00 0.00 3.09
5965 6447 3.006967 AGAGTACAGCACCAACCAGTTAG 59.993 47.826 0.00 0.00 0.00 2.34
5966 6448 2.969950 AGAGTACAGCACCAACCAGTTA 59.030 45.455 0.00 0.00 0.00 2.24
5967 6449 1.768870 AGAGTACAGCACCAACCAGTT 59.231 47.619 0.00 0.00 0.00 3.16
5968 6450 1.424638 AGAGTACAGCACCAACCAGT 58.575 50.000 0.00 0.00 0.00 4.00
5969 6451 2.353803 GGTAGAGTACAGCACCAACCAG 60.354 54.545 0.00 0.00 0.00 4.00
5970 6452 1.621814 GGTAGAGTACAGCACCAACCA 59.378 52.381 0.00 0.00 0.00 3.67
5971 6453 1.621814 TGGTAGAGTACAGCACCAACC 59.378 52.381 9.33 1.60 38.10 3.77
5972 6454 3.006537 TCTTGGTAGAGTACAGCACCAAC 59.993 47.826 16.72 0.00 44.13 3.77
5973 6455 3.236047 TCTTGGTAGAGTACAGCACCAA 58.764 45.455 18.54 18.54 46.18 3.67
5974 6456 2.884320 TCTTGGTAGAGTACAGCACCA 58.116 47.619 8.04 8.04 39.27 4.17
5975 6457 3.955650 TTCTTGGTAGAGTACAGCACC 57.044 47.619 0.00 0.00 0.00 5.01
5976 6458 4.093556 GCAATTCTTGGTAGAGTACAGCAC 59.906 45.833 0.00 0.00 0.00 4.40
5977 6459 4.020218 AGCAATTCTTGGTAGAGTACAGCA 60.020 41.667 0.00 0.00 40.04 4.41
6008 6703 3.877508 ACAGACACTAGAAACTGCCAAAC 59.122 43.478 0.00 0.00 34.25 2.93
6087 6785 8.203681 AGGGAGTATTCACTAAGTTTGTACTT 57.796 34.615 0.00 0.00 46.18 2.24
6105 6803 1.075050 ACTGACTCAACGGAGGGAGTA 59.925 52.381 0.00 0.00 44.16 2.59
6106 6804 0.178958 ACTGACTCAACGGAGGGAGT 60.179 55.000 0.00 0.00 46.16 3.85
6107 6805 0.969894 AACTGACTCAACGGAGGGAG 59.030 55.000 0.00 0.00 45.81 4.30
6108 6806 2.297698 TAACTGACTCAACGGAGGGA 57.702 50.000 0.00 0.00 45.81 4.20
6109 6807 3.611766 AATAACTGACTCAACGGAGGG 57.388 47.619 0.00 0.00 45.81 4.30
6110 6808 5.068234 TGTAATAACTGACTCAACGGAGG 57.932 43.478 0.00 0.00 45.81 4.30
6111 6809 6.645415 ACTTTGTAATAACTGACTCAACGGAG 59.355 38.462 0.00 0.00 46.96 4.63
6112 6810 6.518493 ACTTTGTAATAACTGACTCAACGGA 58.482 36.000 0.00 0.00 0.00 4.69
6113 6811 6.780706 ACTTTGTAATAACTGACTCAACGG 57.219 37.500 0.00 0.00 0.00 4.44
6114 6812 7.847487 TCAACTTTGTAATAACTGACTCAACG 58.153 34.615 0.00 0.00 0.00 4.10
6115 6813 8.827677 ACTCAACTTTGTAATAACTGACTCAAC 58.172 33.333 0.00 0.00 0.00 3.18
6116 6814 8.958119 ACTCAACTTTGTAATAACTGACTCAA 57.042 30.769 0.00 0.00 0.00 3.02
6117 6815 8.201464 TGACTCAACTTTGTAATAACTGACTCA 58.799 33.333 0.00 0.00 0.00 3.41
6118 6816 8.488764 GTGACTCAACTTTGTAATAACTGACTC 58.511 37.037 0.00 0.00 0.00 3.36
6119 6817 8.204836 AGTGACTCAACTTTGTAATAACTGACT 58.795 33.333 0.00 0.00 0.00 3.41
6120 6818 8.366671 AGTGACTCAACTTTGTAATAACTGAC 57.633 34.615 0.00 0.00 0.00 3.51
6121 6819 8.958119 AAGTGACTCAACTTTGTAATAACTGA 57.042 30.769 0.00 0.00 37.05 3.41
6127 6825 9.965824 CCAAAATAAGTGACTCAACTTTGTAAT 57.034 29.630 0.00 0.00 40.77 1.89
6128 6826 8.410141 CCCAAAATAAGTGACTCAACTTTGTAA 58.590 33.333 0.00 0.00 40.77 2.41
6129 6827 7.776030 TCCCAAAATAAGTGACTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
6130 6828 6.605594 TCCCAAAATAAGTGACTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
6131 6829 6.918022 GTCCCAAAATAAGTGACTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
6132 6830 6.238648 CGTCCCAAAATAAGTGACTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
6133 6831 5.238650 CGTCCCAAAATAAGTGACTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
6134 6832 4.755123 CGTCCCAAAATAAGTGACTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
6135 6833 4.753107 TCGTCCCAAAATAAGTGACTCAAC 59.247 41.667 0.00 0.00 0.00 3.18
6136 6834 4.963373 TCGTCCCAAAATAAGTGACTCAA 58.037 39.130 0.00 0.00 0.00 3.02
6137 6835 4.610605 TCGTCCCAAAATAAGTGACTCA 57.389 40.909 0.00 0.00 0.00 3.41
6138 6836 4.392138 CCTTCGTCCCAAAATAAGTGACTC 59.608 45.833 0.00 0.00 0.00 3.36
6139 6837 4.324267 CCTTCGTCCCAAAATAAGTGACT 58.676 43.478 0.00 0.00 0.00 3.41
6140 6838 3.439129 CCCTTCGTCCCAAAATAAGTGAC 59.561 47.826 0.00 0.00 0.00 3.67
6141 6839 3.328343 TCCCTTCGTCCCAAAATAAGTGA 59.672 43.478 0.00 0.00 0.00 3.41
6142 6840 3.681593 TCCCTTCGTCCCAAAATAAGTG 58.318 45.455 0.00 0.00 0.00 3.16
6143 6841 3.329814 ACTCCCTTCGTCCCAAAATAAGT 59.670 43.478 0.00 0.00 0.00 2.24
6144 6842 3.951663 ACTCCCTTCGTCCCAAAATAAG 58.048 45.455 0.00 0.00 0.00 1.73
6145 6843 5.190132 TGATACTCCCTTCGTCCCAAAATAA 59.810 40.000 0.00 0.00 0.00 1.40
6146 6844 4.717778 TGATACTCCCTTCGTCCCAAAATA 59.282 41.667 0.00 0.00 0.00 1.40
6147 6845 3.521937 TGATACTCCCTTCGTCCCAAAAT 59.478 43.478 0.00 0.00 0.00 1.82
6148 6846 2.907696 TGATACTCCCTTCGTCCCAAAA 59.092 45.455 0.00 0.00 0.00 2.44
6149 6847 2.542550 TGATACTCCCTTCGTCCCAAA 58.457 47.619 0.00 0.00 0.00 3.28
6150 6848 2.241281 TGATACTCCCTTCGTCCCAA 57.759 50.000 0.00 0.00 0.00 4.12
6151 6849 2.471815 ATGATACTCCCTTCGTCCCA 57.528 50.000 0.00 0.00 0.00 4.37
6152 6850 3.764218 TCTATGATACTCCCTTCGTCCC 58.236 50.000 0.00 0.00 0.00 4.46
6153 6851 5.535406 TCTTTCTATGATACTCCCTTCGTCC 59.465 44.000 0.00 0.00 0.00 4.79
6154 6852 6.636562 TCTTTCTATGATACTCCCTTCGTC 57.363 41.667 0.00 0.00 0.00 4.20
6155 6853 5.010213 GCTCTTTCTATGATACTCCCTTCGT 59.990 44.000 0.00 0.00 0.00 3.85
6156 6854 5.010112 TGCTCTTTCTATGATACTCCCTTCG 59.990 44.000 0.00 0.00 0.00 3.79
6157 6855 6.412362 TGCTCTTTCTATGATACTCCCTTC 57.588 41.667 0.00 0.00 0.00 3.46
6158 6856 8.497910 TTATGCTCTTTCTATGATACTCCCTT 57.502 34.615 0.00 0.00 0.00 3.95
6159 6857 8.677870 ATTATGCTCTTTCTATGATACTCCCT 57.322 34.615 0.00 0.00 0.00 4.20
6186 6884 8.445275 TTGAAAGCTGATAAAACTGTTCTACA 57.555 30.769 0.00 0.00 0.00 2.74
6187 6885 9.730420 TTTTGAAAGCTGATAAAACTGTTCTAC 57.270 29.630 0.00 0.00 0.00 2.59
6188 6886 9.730420 GTTTTGAAAGCTGATAAAACTGTTCTA 57.270 29.630 18.14 0.00 38.99 2.10
6189 6887 7.706607 GGTTTTGAAAGCTGATAAAACTGTTCT 59.293 33.333 21.69 0.00 40.79 3.01
6191 6889 7.555965 AGGTTTTGAAAGCTGATAAAACTGTT 58.444 30.769 21.69 11.86 44.32 3.16
6192 6890 7.112452 AGGTTTTGAAAGCTGATAAAACTGT 57.888 32.000 21.69 12.90 44.32 3.55
6193 6891 7.169813 GGAAGGTTTTGAAAGCTGATAAAACTG 59.830 37.037 21.69 0.00 45.17 3.16
6196 6894 6.983890 GTGGAAGGTTTTGAAAGCTGATAAAA 59.016 34.615 8.74 0.00 45.17 1.52
6197 6895 6.097554 TGTGGAAGGTTTTGAAAGCTGATAAA 59.902 34.615 8.74 0.00 45.17 1.40
6199 6897 5.136828 TGTGGAAGGTTTTGAAAGCTGATA 58.863 37.500 8.74 0.00 45.17 2.15
6240 7162 8.918961 TTTTTGCGAATGAACTTCTTTTCTAA 57.081 26.923 0.00 0.00 0.00 2.10
6268 7190 8.803235 GGGTTATGAACTTCTTTTCCAAGTTAT 58.197 33.333 0.00 0.00 42.84 1.89
6269 7191 7.040961 CGGGTTATGAACTTCTTTTCCAAGTTA 60.041 37.037 0.00 0.00 42.84 2.24
6270 7192 6.238925 CGGGTTATGAACTTCTTTTCCAAGTT 60.239 38.462 0.00 0.00 44.96 2.66
6271 7193 5.240844 CGGGTTATGAACTTCTTTTCCAAGT 59.759 40.000 0.00 0.00 35.51 3.16
6272 7194 5.472137 TCGGGTTATGAACTTCTTTTCCAAG 59.528 40.000 0.00 0.00 0.00 3.61
6273 7195 5.378332 TCGGGTTATGAACTTCTTTTCCAA 58.622 37.500 0.00 0.00 0.00 3.53
6274 7196 4.975631 TCGGGTTATGAACTTCTTTTCCA 58.024 39.130 0.00 0.00 0.00 3.53
6275 7197 5.952526 TTCGGGTTATGAACTTCTTTTCC 57.047 39.130 0.00 0.00 0.00 3.13
6364 7286 2.967397 CCGTCGTACAAGCCTCCA 59.033 61.111 0.00 0.00 0.00 3.86
6520 7473 3.691609 CAGATGTTTCTTCTAGGCCCAAC 59.308 47.826 0.00 0.00 0.00 3.77
6539 7492 2.979678 AGAGAGTTAACCAAAGCCCAGA 59.020 45.455 0.88 0.00 0.00 3.86
6592 7552 2.365617 GTGGTGAGAACTGGAGAAGTGA 59.634 50.000 0.00 0.00 39.81 3.41
6598 7558 1.548269 GAGAGGTGGTGAGAACTGGAG 59.452 57.143 0.00 0.00 0.00 3.86
6599 7559 1.148027 AGAGAGGTGGTGAGAACTGGA 59.852 52.381 0.00 0.00 0.00 3.86
6612 7572 1.869452 AGGGGAAGGGGAGAGAGGT 60.869 63.158 0.00 0.00 0.00 3.85
6675 7644 2.417516 GCCGAGCTCGATGCCTAA 59.582 61.111 36.59 0.00 44.23 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.