Multiple sequence alignment - TraesCS5A01G316100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G316100 chr5A 100.000 4529 0 0 1 4529 526575501 526580029 0.000000e+00 8364.0
1 TraesCS5A01G316100 chr5A 91.498 247 18 2 3378 3624 606176140 606176383 2.020000e-88 337.0
2 TraesCS5A01G316100 chr5A 87.770 278 30 3 3099 3373 606175798 606176074 5.650000e-84 322.0
3 TraesCS5A01G316100 chr5A 90.698 86 7 1 88 172 331942475 331942560 3.700000e-21 113.0
4 TraesCS5A01G316100 chr5A 98.305 59 1 0 496 554 132629023 132628965 2.230000e-18 104.0
5 TraesCS5A01G316100 chr5A 92.857 56 3 1 1926 1980 239529950 239529895 3.760000e-11 80.5
6 TraesCS5A01G316100 chr5D 93.184 1247 44 21 551 1776 414023061 414024287 0.000000e+00 1794.0
7 TraesCS5A01G316100 chr5D 94.392 1052 36 7 1980 3023 414024383 414025419 0.000000e+00 1594.0
8 TraesCS5A01G316100 chr5D 90.327 672 35 11 3378 4036 414025929 414026583 0.000000e+00 854.0
9 TraesCS5A01G316100 chr5D 93.043 345 23 1 3020 3364 414025499 414025842 1.880000e-138 503.0
10 TraesCS5A01G316100 chr5D 89.493 276 26 2 3099 3373 484699049 484699322 3.350000e-91 346.0
11 TraesCS5A01G316100 chr5D 86.834 319 18 4 1 296 414017683 414018000 7.260000e-88 335.0
12 TraesCS5A01G316100 chr5D 89.516 248 17 5 3378 3624 484658881 484659120 5.690000e-79 305.0
13 TraesCS5A01G316100 chr5D 88.664 247 20 4 3378 3624 484699407 484699645 1.230000e-75 294.0
14 TraesCS5A01G316100 chr5D 88.136 118 13 1 3256 3373 484658680 484658796 6.110000e-29 139.0
15 TraesCS5A01G316100 chr5D 91.860 86 6 1 1 85 414017508 414017593 7.960000e-23 119.0
16 TraesCS5A01G316100 chr5D 89.130 92 3 1 1856 1940 414024284 414024375 1.720000e-19 108.0
17 TraesCS5A01G316100 chr5D 88.636 88 8 2 1 87 414021559 414021645 6.200000e-19 106.0
18 TraesCS5A01G316100 chr5D 93.750 64 4 0 485 548 309920620 309920683 3.730000e-16 97.1
19 TraesCS5A01G316100 chr5D 83.721 86 12 2 88 172 484805398 484805314 3.760000e-11 80.5
20 TraesCS5A01G316100 chr5D 95.918 49 1 1 1934 1981 132417971 132417923 1.350000e-10 78.7
21 TraesCS5A01G316100 chr5D 84.848 66 9 1 1916 1981 551612917 551612853 1.050000e-06 65.8
22 TraesCS5A01G316100 chr5B 90.136 1399 85 27 1980 3373 596461135 596459785 0.000000e+00 1770.0
23 TraesCS5A01G316100 chr5B 94.444 1044 39 5 1980 3023 499081960 499082984 0.000000e+00 1589.0
24 TraesCS5A01G316100 chr5B 91.835 1139 67 9 1980 3106 596498936 596497812 0.000000e+00 1565.0
25 TraesCS5A01G316100 chr5B 91.511 1072 65 11 1989 3059 596542025 596540979 0.000000e+00 1452.0
26 TraesCS5A01G316100 chr5B 93.287 864 32 12 551 1397 499080089 499080943 0.000000e+00 1251.0
27 TraesCS5A01G316100 chr5B 90.877 559 38 7 965 1518 596499902 596499352 0.000000e+00 737.0
28 TraesCS5A01G316100 chr5B 87.391 460 31 10 1072 1518 596543101 596542656 1.880000e-138 503.0
29 TraesCS5A01G316100 chr5B 92.174 345 27 0 3029 3373 596494278 596493934 5.270000e-134 488.0
30 TraesCS5A01G316100 chr5B 91.844 282 21 2 3378 3659 499084231 499084510 4.250000e-105 392.0
31 TraesCS5A01G316100 chr5B 92.946 241 17 0 3073 3313 499083731 499083971 7.210000e-93 351.0
32 TraesCS5A01G316100 chr5B 86.646 322 33 8 3384 3698 596459694 596459376 9.320000e-92 348.0
33 TraesCS5A01G316100 chr5B 84.150 347 37 11 1541 1872 499081557 499081900 2.030000e-83 320.0
34 TraesCS5A01G316100 chr5B 87.251 251 28 3 3378 3628 596081355 596081601 2.670000e-72 283.0
35 TraesCS5A01G316100 chr5B 88.936 235 18 7 1545 1776 596461461 596461232 2.670000e-72 283.0
36 TraesCS5A01G316100 chr5B 86.694 248 28 3 3381 3628 596671111 596670869 2.080000e-68 270.0
37 TraesCS5A01G316100 chr5B 83.389 301 38 8 824 1115 596671855 596671558 7.470000e-68 268.0
38 TraesCS5A01G316100 chr5B 93.333 120 7 1 1396 1515 499081061 499081179 4.660000e-40 176.0
39 TraesCS5A01G316100 chr5B 86.624 157 15 1 4195 4351 499086977 499087127 7.790000e-38 169.0
40 TraesCS5A01G316100 chr5B 94.382 89 5 0 1770 1858 429030605 429030693 2.200000e-28 137.0
41 TraesCS5A01G316100 chr5B 98.387 62 1 0 3019 3080 499083064 499083125 4.790000e-20 110.0
42 TraesCS5A01G316100 chr5B 90.909 66 5 1 1709 1774 596542195 596542131 2.240000e-13 87.9
43 TraesCS5A01G316100 chr5B 100.000 44 0 0 1937 1980 696201102 696201145 1.040000e-11 82.4
44 TraesCS5A01G316100 chr5B 83.721 86 12 2 88 172 402756374 402756290 3.760000e-11 80.5
45 TraesCS5A01G316100 chr5B 97.826 46 1 0 1935 1980 537533144 537533189 3.760000e-11 80.5
46 TraesCS5A01G316100 chr5B 97.826 46 1 0 1935 1980 693583902 693583857 3.760000e-11 80.5
47 TraesCS5A01G316100 chr3D 88.000 350 20 3 2122 2466 451229346 451229014 1.180000e-105 394.0
48 TraesCS5A01G316100 chr3D 90.411 73 4 3 493 565 202475992 202476061 4.820000e-15 93.5
49 TraesCS5A01G316100 chr3D 93.878 49 3 0 1933 1981 401897789 401897741 1.750000e-09 75.0
50 TraesCS5A01G316100 chr3B 85.372 376 23 11 2059 2427 592863595 592863245 1.200000e-95 361.0
51 TraesCS5A01G316100 chr6A 80.222 450 65 10 4025 4454 119824055 119823610 2.630000e-82 316.0
52 TraesCS5A01G316100 chr6A 90.789 76 3 4 492 567 396303031 396303102 1.040000e-16 99.0
53 TraesCS5A01G316100 chr6A 93.846 65 4 0 490 554 603904679 603904743 1.040000e-16 99.0
54 TraesCS5A01G316100 chr6A 90.741 54 4 1 1928 1981 315625372 315625320 2.260000e-08 71.3
55 TraesCS5A01G316100 chrUn 94.565 92 4 1 1772 1862 224653308 224653399 1.700000e-29 141.0
56 TraesCS5A01G316100 chrUn 89.381 113 9 3 1759 1869 94847070 94846959 6.110000e-29 139.0
57 TraesCS5A01G316100 chrUn 90.361 83 8 0 90 172 476000191 476000273 4.790000e-20 110.0
58 TraesCS5A01G316100 chr2B 94.565 92 4 1 1773 1864 241376410 241376320 1.700000e-29 141.0
59 TraesCS5A01G316100 chr2B 91.000 100 7 2 1771 1870 315974335 315974238 2.840000e-27 134.0
60 TraesCS5A01G316100 chr2B 97.778 45 1 0 1937 1981 314998854 314998810 1.350000e-10 78.7
61 TraesCS5A01G316100 chr1B 92.079 101 5 3 1761 1859 497472802 497472703 6.110000e-29 139.0
62 TraesCS5A01G316100 chr1B 86.885 61 6 2 1921 1981 156596547 156596605 2.920000e-07 67.6
63 TraesCS5A01G316100 chr6B 90.476 105 9 1 1773 1877 6187601 6187704 2.200000e-28 137.0
64 TraesCS5A01G316100 chr6B 100.000 45 0 0 1936 1980 424084089 424084133 2.900000e-12 84.2
65 TraesCS5A01G316100 chr6B 100.000 45 0 0 1936 1980 424306787 424306831 2.900000e-12 84.2
66 TraesCS5A01G316100 chr6B 93.878 49 3 0 1933 1981 43069499 43069451 1.750000e-09 75.0
67 TraesCS5A01G316100 chr6D 89.623 106 9 2 1758 1862 268067212 268067108 2.840000e-27 134.0
68 TraesCS5A01G316100 chr2D 94.118 85 5 0 1773 1857 651527877 651527793 3.680000e-26 130.0
69 TraesCS5A01G316100 chr2D 85.393 89 11 2 85 172 75838844 75838931 1.740000e-14 91.6
70 TraesCS5A01G316100 chr4A 90.361 83 8 0 90 172 644691500 644691582 4.790000e-20 110.0
71 TraesCS5A01G316100 chr4A 90.361 83 8 0 90 172 644739695 644739777 4.790000e-20 110.0
72 TraesCS5A01G316100 chr7D 96.825 63 1 1 492 554 149743965 149743904 2.230000e-18 104.0
73 TraesCS5A01G316100 chr7D 96.721 61 1 1 495 554 508828525 508828465 2.880000e-17 100.0
74 TraesCS5A01G316100 chr7D 93.878 49 3 0 1933 1981 5023436 5023388 1.750000e-09 75.0
75 TraesCS5A01G316100 chr7B 96.721 61 1 1 495 554 486710135 486710075 2.880000e-17 100.0
76 TraesCS5A01G316100 chr7B 84.884 86 11 2 88 172 606594740 606594824 8.070000e-13 86.1
77 TraesCS5A01G316100 chr1A 92.537 67 5 0 488 554 262054155 262054089 3.730000e-16 97.1
78 TraesCS5A01G316100 chr4D 91.935 62 1 4 1918 1977 373932005 373932064 2.900000e-12 84.2
79 TraesCS5A01G316100 chr4D 100.000 44 0 0 1936 1979 251523065 251523022 1.040000e-11 82.4
80 TraesCS5A01G316100 chr4D 90.323 62 2 4 1918 1977 373932366 373932425 1.350000e-10 78.7
81 TraesCS5A01G316100 chr1D 97.778 45 1 0 1937 1981 361353561 361353605 1.350000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G316100 chr5A 526575501 526580029 4528 False 8364.000000 8364 100.000000 1 4529 1 chr5A.!!$F2 4528
1 TraesCS5A01G316100 chr5A 606175798 606176383 585 False 329.500000 337 89.634000 3099 3624 2 chr5A.!!$F3 525
2 TraesCS5A01G316100 chr5D 414017508 414026583 9075 False 676.625000 1794 90.925750 1 4036 8 chr5D.!!$F2 4035
3 TraesCS5A01G316100 chr5D 484699049 484699645 596 False 320.000000 346 89.078500 3099 3624 2 chr5D.!!$F4 525
4 TraesCS5A01G316100 chr5B 596493934 596499902 5968 True 930.000000 1565 91.628667 965 3373 3 chr5B.!!$R4 2408
5 TraesCS5A01G316100 chr5B 596459376 596461461 2085 True 800.333333 1770 88.572667 1545 3698 3 chr5B.!!$R3 2153
6 TraesCS5A01G316100 chr5B 596540979 596543101 2122 True 680.966667 1452 89.937000 1072 3059 3 chr5B.!!$R5 1987
7 TraesCS5A01G316100 chr5B 499080089 499087127 7038 False 544.750000 1589 91.876875 551 4351 8 chr5B.!!$F5 3800
8 TraesCS5A01G316100 chr5B 596670869 596671855 986 True 269.000000 270 85.041500 824 3628 2 chr5B.!!$R6 2804

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
443 1694 0.037697 ATGTACATGTCCGTGCACGT 60.038 50.000 34.81 19.49 34.19 4.49 F
444 1695 0.249531 TGTACATGTCCGTGCACGTT 60.250 50.000 34.81 15.82 37.74 3.99 F
1562 7213 0.383590 TTGTGTGGTGTGCGGAATTG 59.616 50.000 0.00 0.00 0.00 2.32 F
1952 7715 1.133231 ACCTAATACTCCCTCCGTCCC 60.133 57.143 0.00 0.00 0.00 4.46 F
1953 7716 1.133262 CCTAATACTCCCTCCGTCCCA 60.133 57.143 0.00 0.00 0.00 4.37 F
2516 8288 1.949525 ACAAGATCGCATAATGGTGGC 59.050 47.619 0.00 0.00 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1268 6420 0.107848 AATTCCCCTCAACTACCGCG 60.108 55.000 0.00 0.0 0.00 6.46 R
1978 7741 1.202879 TGGATCCAGACAGGCGTTTTT 60.203 47.619 11.44 0.0 37.29 1.94 R
3001 8775 1.736126 GTACCTAACCGGCAAAAGAGC 59.264 52.381 0.00 0.0 35.61 4.09 R
3355 12963 1.975407 ACAGTGTAGGTCCCGGTCG 60.975 63.158 0.00 0.0 0.00 4.79 R
3403 13093 2.344950 CTCCTGATCACACAACAGAGC 58.655 52.381 0.00 0.0 34.07 4.09 R
4501 16190 0.034089 GCTAATCAAGGTGCCTGGGT 60.034 55.000 0.00 0.0 0.00 4.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.372837 AGGCCTACGTAACCTTCCAAAA 59.627 45.455 1.29 0.00 0.00 2.44
48 50 5.796502 AAAATCCTCTTGGTCCCTGAATA 57.203 39.130 0.00 0.00 34.23 1.75
56 58 1.343580 TGGTCCCTGAATATCACCGGA 60.344 52.381 9.46 0.00 0.00 5.14
116 292 4.340617 CCCTTTGTTTGGGCTACAGATTA 58.659 43.478 0.00 0.00 37.99 1.75
120 296 6.322201 CCTTTGTTTGGGCTACAGATTATGAT 59.678 38.462 0.00 0.00 0.00 2.45
121 297 7.147846 CCTTTGTTTGGGCTACAGATTATGATT 60.148 37.037 0.00 0.00 0.00 2.57
130 306 8.577296 GGGCTACAGATTATGATTATCGCTATA 58.423 37.037 0.00 0.00 0.00 1.31
159 335 5.415701 TGGATTCCTGAAAATCAGTTGTAGC 59.584 40.000 3.95 0.00 42.80 3.58
191 385 6.843752 TCCTGTTTGTTTACCCTTCTATTGA 58.156 36.000 0.00 0.00 0.00 2.57
199 393 6.206634 TGTTTACCCTTCTATTGAAACTGCAG 59.793 38.462 13.48 13.48 0.00 4.41
211 405 2.834638 AACTGCAGGGGCTATGAAAT 57.165 45.000 19.93 0.00 41.91 2.17
233 427 7.722949 AATTGTCATTAATGTCCCTGAATGT 57.277 32.000 14.97 0.00 32.33 2.71
253 448 9.308000 TGAATGTTGGGTATTTTGAGTTTAGAT 57.692 29.630 0.00 0.00 0.00 1.98
297 496 4.782019 AAGTGCAAATTAGCCGATTTCA 57.218 36.364 0.00 0.00 0.00 2.69
299 498 3.505680 AGTGCAAATTAGCCGATTTCACA 59.494 39.130 17.13 8.09 33.91 3.58
300 499 4.158394 AGTGCAAATTAGCCGATTTCACAT 59.842 37.500 17.13 8.01 33.91 3.21
301 500 4.864247 GTGCAAATTAGCCGATTTCACATT 59.136 37.500 0.00 0.00 32.95 2.71
302 501 5.004726 GTGCAAATTAGCCGATTTCACATTC 59.995 40.000 0.00 0.00 32.95 2.67
303 502 5.105797 TGCAAATTAGCCGATTTCACATTCT 60.106 36.000 0.00 0.00 0.00 2.40
305 504 6.020360 GCAAATTAGCCGATTTCACATTCTTC 60.020 38.462 0.00 0.00 0.00 2.87
306 505 7.253422 CAAATTAGCCGATTTCACATTCTTCT 58.747 34.615 0.00 0.00 0.00 2.85
307 506 6.610741 ATTAGCCGATTTCACATTCTTCTC 57.389 37.500 0.00 0.00 0.00 2.87
308 507 3.942829 AGCCGATTTCACATTCTTCTCA 58.057 40.909 0.00 0.00 0.00 3.27
309 508 3.686726 AGCCGATTTCACATTCTTCTCAC 59.313 43.478 0.00 0.00 0.00 3.51
310 509 3.436704 GCCGATTTCACATTCTTCTCACA 59.563 43.478 0.00 0.00 0.00 3.58
311 510 4.083324 GCCGATTTCACATTCTTCTCACAA 60.083 41.667 0.00 0.00 0.00 3.33
312 511 5.625251 CCGATTTCACATTCTTCTCACAAG 58.375 41.667 0.00 0.00 0.00 3.16
313 512 5.409520 CCGATTTCACATTCTTCTCACAAGA 59.590 40.000 0.00 0.00 0.00 3.02
315 514 7.178741 CGATTTCACATTCTTCTCACAAGATC 58.821 38.462 0.00 0.00 0.00 2.75
316 515 7.148523 CGATTTCACATTCTTCTCACAAGATCA 60.149 37.037 0.00 0.00 0.00 2.92
317 516 7.991084 TTTCACATTCTTCTCACAAGATCAT 57.009 32.000 0.00 0.00 0.00 2.45
318 517 6.980051 TCACATTCTTCTCACAAGATCATG 57.020 37.500 0.00 0.00 0.00 3.07
319 518 5.353400 TCACATTCTTCTCACAAGATCATGC 59.647 40.000 0.00 0.00 0.00 4.06
320 519 5.123344 CACATTCTTCTCACAAGATCATGCA 59.877 40.000 0.00 0.00 0.00 3.96
321 520 5.354513 ACATTCTTCTCACAAGATCATGCAG 59.645 40.000 0.00 0.00 0.00 4.41
322 521 4.813750 TCTTCTCACAAGATCATGCAGA 57.186 40.909 0.00 0.00 0.00 4.26
324 523 3.257469 TCTCACAAGATCATGCAGACC 57.743 47.619 0.00 0.00 0.00 3.85
325 524 2.568509 TCTCACAAGATCATGCAGACCA 59.431 45.455 0.00 0.00 0.00 4.02
326 525 3.008266 TCTCACAAGATCATGCAGACCAA 59.992 43.478 0.00 0.00 0.00 3.67
327 526 3.753815 TCACAAGATCATGCAGACCAAA 58.246 40.909 0.00 0.00 0.00 3.28
328 527 3.754850 TCACAAGATCATGCAGACCAAAG 59.245 43.478 0.00 0.00 0.00 2.77
330 529 1.760192 AGATCATGCAGACCAAAGGC 58.240 50.000 0.00 0.00 0.00 4.35
331 530 1.284198 AGATCATGCAGACCAAAGGCT 59.716 47.619 0.00 0.00 0.00 4.58
332 531 1.674962 GATCATGCAGACCAAAGGCTC 59.325 52.381 0.00 0.00 0.00 4.70
333 532 0.674581 TCATGCAGACCAAAGGCTCG 60.675 55.000 0.00 0.00 0.00 5.03
350 1601 5.438833 AGGCTCGTCTAATTCACTAGTACT 58.561 41.667 0.00 0.00 0.00 2.73
352 1603 5.505985 GGCTCGTCTAATTCACTAGTACTGG 60.506 48.000 5.39 4.89 0.00 4.00
363 1614 4.347000 TCACTAGTACTGGCAAGGAAAAGT 59.653 41.667 5.39 0.00 0.00 2.66
384 1635 0.527565 GCAATCAAGGCATGGAACGT 59.472 50.000 0.00 0.00 0.00 3.99
393 1644 0.301687 GCATGGAACGTGTATGCTCG 59.698 55.000 18.91 3.67 42.84 5.03
410 1661 3.056304 GCTCGTCTGCCTCATCTAATTC 58.944 50.000 0.00 0.00 0.00 2.17
420 1671 6.577103 TGCCTCATCTAATTCACTAGTTCAG 58.423 40.000 0.00 0.00 0.00 3.02
430 1681 4.864704 TCACTAGTTCAGCACATGTACA 57.135 40.909 0.00 0.00 31.94 2.90
442 1693 0.369931 CATGTACATGTCCGTGCACG 59.630 55.000 31.77 31.77 34.19 5.34
443 1694 0.037697 ATGTACATGTCCGTGCACGT 60.038 50.000 34.81 19.49 34.19 4.49
444 1695 0.249531 TGTACATGTCCGTGCACGTT 60.250 50.000 34.81 15.82 37.74 3.99
445 1696 1.000496 TGTACATGTCCGTGCACGTTA 60.000 47.619 34.81 21.44 37.74 3.18
469 1720 2.171940 GCTTCAGCGCAGTCAACG 59.828 61.111 11.47 0.00 0.00 4.10
477 1728 1.491563 CGCAGTCAACGGCTACAAC 59.508 57.895 3.87 0.00 34.89 3.32
478 1729 1.218875 CGCAGTCAACGGCTACAACA 61.219 55.000 3.87 0.00 34.89 3.33
485 1736 4.081642 AGTCAACGGCTACAACACATAGAT 60.082 41.667 0.00 0.00 0.00 1.98
486 1737 4.032900 GTCAACGGCTACAACACATAGATG 59.967 45.833 0.00 0.00 0.00 2.90
490 1741 3.555956 CGGCTACAACACATAGATGGTTC 59.444 47.826 0.00 0.00 0.00 3.62
496 1747 7.119846 GCTACAACACATAGATGGTTCTTCTTT 59.880 37.037 0.00 0.00 33.17 2.52
497 1748 7.206981 ACAACACATAGATGGTTCTTCTTTG 57.793 36.000 0.00 0.00 33.17 2.77
498 1749 6.998074 ACAACACATAGATGGTTCTTCTTTGA 59.002 34.615 7.73 0.00 33.17 2.69
499 1750 7.173907 ACAACACATAGATGGTTCTTCTTTGAG 59.826 37.037 7.73 4.03 33.17 3.02
500 1751 7.009179 ACACATAGATGGTTCTTCTTTGAGA 57.991 36.000 7.73 0.00 33.17 3.27
502 1753 7.038729 ACACATAGATGGTTCTTCTTTGAGAGA 60.039 37.037 7.73 0.00 33.17 3.10
503 1754 7.821359 CACATAGATGGTTCTTCTTTGAGAGAA 59.179 37.037 7.73 0.00 42.03 2.87
504 1755 8.547173 ACATAGATGGTTCTTCTTTGAGAGAAT 58.453 33.333 7.73 0.00 43.23 2.40
505 1756 9.393512 CATAGATGGTTCTTCTTTGAGAGAATT 57.606 33.333 0.00 0.00 43.23 2.17
506 1757 7.920160 AGATGGTTCTTCTTTGAGAGAATTC 57.080 36.000 0.00 0.00 43.23 2.17
507 1758 6.883756 AGATGGTTCTTCTTTGAGAGAATTCC 59.116 38.462 0.65 0.00 43.23 3.01
509 1760 6.605119 TGGTTCTTCTTTGAGAGAATTCCTT 58.395 36.000 0.65 0.00 43.23 3.36
510 1761 7.745717 TGGTTCTTCTTTGAGAGAATTCCTTA 58.254 34.615 0.65 0.00 43.23 2.69
511 1762 8.386264 TGGTTCTTCTTTGAGAGAATTCCTTAT 58.614 33.333 0.65 0.00 43.23 1.73
512 1763 9.237187 GGTTCTTCTTTGAGAGAATTCCTTATT 57.763 33.333 0.65 0.00 43.23 1.40
517 1768 6.378280 TCTTTGAGAGAATTCCTTATTTGGCC 59.622 38.462 0.65 0.00 0.00 5.36
518 1769 4.536765 TGAGAGAATTCCTTATTTGGCCC 58.463 43.478 0.00 0.00 0.00 5.80
519 1770 4.230502 TGAGAGAATTCCTTATTTGGCCCT 59.769 41.667 0.00 0.00 0.00 5.19
520 1771 5.204292 GAGAGAATTCCTTATTTGGCCCTT 58.796 41.667 0.00 0.00 0.00 3.95
521 1772 5.593786 AGAGAATTCCTTATTTGGCCCTTT 58.406 37.500 0.00 0.00 0.00 3.11
522 1773 5.658634 AGAGAATTCCTTATTTGGCCCTTTC 59.341 40.000 0.00 0.00 0.00 2.62
523 1774 5.593786 AGAATTCCTTATTTGGCCCTTTCT 58.406 37.500 0.00 0.00 0.00 2.52
524 1775 6.025539 AGAATTCCTTATTTGGCCCTTTCTT 58.974 36.000 0.00 0.00 0.00 2.52
536 5416 5.304778 TGGCCCTTTCTTAAAATTTGCTTC 58.695 37.500 0.00 0.00 0.00 3.86
537 5417 4.695455 GGCCCTTTCTTAAAATTTGCTTCC 59.305 41.667 0.00 0.00 0.00 3.46
538 5418 4.695455 GCCCTTTCTTAAAATTTGCTTCCC 59.305 41.667 0.00 0.00 0.00 3.97
540 5420 6.533730 CCCTTTCTTAAAATTTGCTTCCCTT 58.466 36.000 0.00 0.00 0.00 3.95
542 5422 7.502226 CCCTTTCTTAAAATTTGCTTCCCTTTT 59.498 33.333 0.00 0.00 0.00 2.27
543 5423 8.902806 CCTTTCTTAAAATTTGCTTCCCTTTTT 58.097 29.630 0.00 0.00 0.00 1.94
544 5424 9.720667 CTTTCTTAAAATTTGCTTCCCTTTTTG 57.279 29.630 0.00 0.00 0.00 2.44
545 5425 7.800155 TCTTAAAATTTGCTTCCCTTTTTGG 57.200 32.000 0.00 0.00 0.00 3.28
546 5426 4.916983 AAAATTTGCTTCCCTTTTTGGC 57.083 36.364 0.00 0.00 0.00 4.52
547 5427 2.566833 ATTTGCTTCCCTTTTTGGCC 57.433 45.000 0.00 0.00 0.00 5.36
548 5428 1.506025 TTTGCTTCCCTTTTTGGCCT 58.494 45.000 3.32 0.00 0.00 5.19
551 5431 2.683768 TGCTTCCCTTTTTGGCCTTAA 58.316 42.857 3.32 0.00 0.00 1.85
552 5432 3.041946 TGCTTCCCTTTTTGGCCTTAAA 58.958 40.909 3.32 1.41 0.00 1.52
554 5434 4.065088 GCTTCCCTTTTTGGCCTTAAAAG 58.935 43.478 24.84 24.84 40.56 2.27
555 5435 4.202315 GCTTCCCTTTTTGGCCTTAAAAGA 60.202 41.667 29.57 17.07 42.45 2.52
556 5436 5.541845 CTTCCCTTTTTGGCCTTAAAAGAG 58.458 41.667 29.57 22.46 42.45 2.85
557 5437 4.810345 TCCCTTTTTGGCCTTAAAAGAGA 58.190 39.130 29.57 23.77 42.45 3.10
558 5438 4.587262 TCCCTTTTTGGCCTTAAAAGAGAC 59.413 41.667 29.57 0.00 42.45 3.36
562 5569 6.821160 CCTTTTTGGCCTTAAAAGAGACAAAA 59.179 34.615 29.57 15.23 42.45 2.44
627 5635 8.918202 ATGTAAGTGTGAAAAGACAAATAGGA 57.082 30.769 0.00 0.00 0.00 2.94
628 5636 8.740123 TGTAAGTGTGAAAAGACAAATAGGAA 57.260 30.769 0.00 0.00 0.00 3.36
671 5680 2.050350 CAGTTGGGCTGGGCTCATG 61.050 63.158 0.00 0.00 39.47 3.07
734 5749 5.163622 CCACACTTAGCCCATATTTGTTCTG 60.164 44.000 0.00 0.00 0.00 3.02
735 5750 5.647658 CACACTTAGCCCATATTTGTTCTGA 59.352 40.000 0.00 0.00 0.00 3.27
945 5967 3.227276 CCGATCTCCCACCTCCCG 61.227 72.222 0.00 0.00 0.00 5.14
1262 6414 4.974103 CTCGGAAGCATAAGGTAATTCG 57.026 45.455 0.00 0.00 0.00 3.34
1268 6420 5.485662 AAGCATAAGGTAATTCGTTGCTC 57.514 39.130 0.00 0.00 0.00 4.26
1336 6493 5.245531 GGTAGTTCCACTGAATTGACATGA 58.754 41.667 0.00 0.00 35.97 3.07
1337 6494 5.882557 GGTAGTTCCACTGAATTGACATGAT 59.117 40.000 0.00 0.00 35.97 2.45
1338 6495 5.892160 AGTTCCACTGAATTGACATGATG 57.108 39.130 0.00 0.00 31.98 3.07
1385 6542 1.880271 TCGATCTCGCTATCTTCCGT 58.120 50.000 0.00 0.00 39.60 4.69
1388 6545 2.159680 CGATCTCGCTATCTTCCGTACC 60.160 54.545 0.00 0.00 0.00 3.34
1402 6678 2.563620 TCCGTACCTGTTTGTATCTGCA 59.436 45.455 0.00 0.00 0.00 4.41
1429 6705 6.012658 TGCTGGATTCTAACAATCACAAAC 57.987 37.500 0.00 0.00 0.00 2.93
1562 7213 0.383590 TTGTGTGGTGTGCGGAATTG 59.616 50.000 0.00 0.00 0.00 2.32
1566 7217 2.324330 TGGTGTGCGGAATTGCTCG 61.324 57.895 0.00 0.00 35.36 5.03
1568 7219 1.154413 GTGTGCGGAATTGCTCGTG 60.154 57.895 0.00 0.00 35.36 4.35
1578 7229 3.243301 GGAATTGCTCGTGTATACTCCGA 60.243 47.826 14.55 14.55 0.00 4.55
1597 7248 7.542890 ACTCCGATCTGACTAATATTGCTATG 58.457 38.462 0.00 0.00 0.00 2.23
1699 7357 5.420725 TCCAGCAGATTGTACTGTACATT 57.579 39.130 20.31 16.67 38.68 2.71
1705 7363 8.598924 CAGCAGATTGTACTGTACATTTAGAAG 58.401 37.037 20.31 8.96 38.68 2.85
1780 7531 7.725844 ACTTCATTTGTTGATTTCTACTCCCTT 59.274 33.333 0.00 0.00 33.34 3.95
1784 7535 6.877611 TTGTTGATTTCTACTCCCTTTGTC 57.122 37.500 0.00 0.00 0.00 3.18
1785 7536 5.313712 TGTTGATTTCTACTCCCTTTGTCC 58.686 41.667 0.00 0.00 0.00 4.02
1786 7537 4.569719 TGATTTCTACTCCCTTTGTCCC 57.430 45.455 0.00 0.00 0.00 4.46
1792 7543 5.630415 TCTACTCCCTTTGTCCCATAATG 57.370 43.478 0.00 0.00 0.00 1.90
1795 7546 5.373812 ACTCCCTTTGTCCCATAATGTAG 57.626 43.478 0.00 0.00 0.00 2.74
1830 7581 3.893720 ACTACACTAGTGTCGGAAAACG 58.106 45.455 31.11 12.68 43.74 3.60
1836 7592 4.380974 CACTAGTGTCGGAAAACGTCTTAC 59.619 45.833 15.06 0.00 44.69 2.34
1842 7598 6.090358 AGTGTCGGAAAACGTCTTACATTATG 59.910 38.462 0.00 0.00 44.69 1.90
1843 7599 5.349270 TGTCGGAAAACGTCTTACATTATGG 59.651 40.000 0.00 0.00 44.69 2.74
1844 7600 4.871557 TCGGAAAACGTCTTACATTATGGG 59.128 41.667 0.00 0.00 44.69 4.00
1942 7705 7.739498 TCAAACCAAGTGAAACCTAATACTC 57.261 36.000 0.00 0.00 37.80 2.59
1943 7706 6.713450 TCAAACCAAGTGAAACCTAATACTCC 59.287 38.462 0.00 0.00 37.80 3.85
1944 7707 5.175388 ACCAAGTGAAACCTAATACTCCC 57.825 43.478 0.00 0.00 37.80 4.30
1945 7708 4.850386 ACCAAGTGAAACCTAATACTCCCT 59.150 41.667 0.00 0.00 37.80 4.20
1947 7710 5.429130 CAAGTGAAACCTAATACTCCCTCC 58.571 45.833 0.00 0.00 37.80 4.30
1948 7711 3.705072 AGTGAAACCTAATACTCCCTCCG 59.295 47.826 0.00 0.00 37.80 4.63
1949 7712 3.450096 GTGAAACCTAATACTCCCTCCGT 59.550 47.826 0.00 0.00 0.00 4.69
1950 7713 3.703052 TGAAACCTAATACTCCCTCCGTC 59.297 47.826 0.00 0.00 0.00 4.79
1951 7714 2.378378 ACCTAATACTCCCTCCGTCC 57.622 55.000 0.00 0.00 0.00 4.79
1952 7715 1.133231 ACCTAATACTCCCTCCGTCCC 60.133 57.143 0.00 0.00 0.00 4.46
1953 7716 1.133262 CCTAATACTCCCTCCGTCCCA 60.133 57.143 0.00 0.00 0.00 4.37
1954 7717 2.674420 CTAATACTCCCTCCGTCCCAA 58.326 52.381 0.00 0.00 0.00 4.12
1955 7718 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
1956 7719 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
1957 7720 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
1958 7721 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1959 7722 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1960 7723 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
1961 7724 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
1962 7725 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
1963 7726 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
1964 7727 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
1965 7728 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1966 7729 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
1967 7730 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
1968 7731 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
1969 7732 4.154195 CCGTCCCAAAATAAGTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
1970 7733 4.378459 CGTCCCAAAATAAGTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
1971 7734 4.762251 GTCCCAAAATAAGTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
1972 7735 5.241728 GTCCCAAAATAAGTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
1973 7736 6.430000 GTCCCAAAATAAGTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
1974 7737 6.655003 TCCCAAAATAAGTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
1975 7738 6.431234 CCCAAAATAAGTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
1976 7739 7.606456 CCCAAAATAAGTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
1977 7740 9.167311 CCAAAATAAGTGTCTCAAGCTTAGTAT 57.833 33.333 0.00 0.00 0.00 2.12
2218 7990 4.405680 ACCTCTGCTAATGCTATGTACACA 59.594 41.667 0.00 0.00 40.48 3.72
2373 8145 7.562135 GGTGACTTCTACTATGAATTGGGTTA 58.438 38.462 0.00 0.00 0.00 2.85
2516 8288 1.949525 ACAAGATCGCATAATGGTGGC 59.050 47.619 0.00 0.00 0.00 5.01
2582 8354 8.652810 AAAGAAAAACTGATCTTGGTTCATTG 57.347 30.769 0.00 0.00 36.09 2.82
2720 8492 9.643693 CATTGTAATTAATGGATAATCCTTGCC 57.356 33.333 0.00 0.00 37.46 4.52
2730 8502 4.385310 GGATAATCCTTGCCCAGTACAGTT 60.385 45.833 0.00 0.00 32.53 3.16
2731 8503 3.525800 AATCCTTGCCCAGTACAGTTT 57.474 42.857 0.00 0.00 0.00 2.66
2732 8504 3.525800 ATCCTTGCCCAGTACAGTTTT 57.474 42.857 0.00 0.00 0.00 2.43
2733 8505 3.306472 TCCTTGCCCAGTACAGTTTTT 57.694 42.857 0.00 0.00 0.00 1.94
2785 8559 7.792374 TTATAGCTTTCTGGCTCTTGTAATG 57.208 36.000 0.00 0.00 42.97 1.90
2792 8566 5.357742 TCTGGCTCTTGTAATGCTTCATA 57.642 39.130 0.00 0.00 0.00 2.15
2925 8699 5.065988 TGAACTAGCTCAGGTTTGTGTTTTC 59.934 40.000 0.00 0.00 0.00 2.29
2973 8747 7.868922 GCATATCAATTGGCATATGTTGAAAGA 59.131 33.333 20.13 1.34 35.97 2.52
2997 8771 7.673926 AGACAAAATCCCCATACAGTACATTTT 59.326 33.333 0.00 0.00 0.00 1.82
3012 8786 6.907212 CAGTACATTTTATAGCTCTTTTGCCG 59.093 38.462 0.00 0.00 0.00 5.69
3173 12646 5.463724 CACTGTAGAACAAGTTGAGAAGGAC 59.536 44.000 10.54 0.69 0.00 3.85
3190 12663 3.242867 AGGACTTCTCATGGTCAACTGA 58.757 45.455 0.00 0.00 34.49 3.41
3234 12707 6.378848 TGAAACTTTGCTAAAGGTAAACACCT 59.621 34.615 11.59 0.00 37.47 4.00
3236 12710 4.514066 ACTTTGCTAAAGGTAAACACCTCG 59.486 41.667 11.59 0.00 42.82 4.63
3254 12728 5.348997 CACCTCGTCTGGATTTTCTCTTTAC 59.651 44.000 0.00 0.00 0.00 2.01
3301 12791 3.317993 CCTCGCCAAAAGGAAAGAAAAGA 59.682 43.478 0.00 0.00 35.83 2.52
3355 12963 8.417106 TGTTGGAACTCTGATATATTCACTCTC 58.583 37.037 0.00 0.00 0.00 3.20
3373 12981 1.975407 CGACCGGGACCTACACTGT 60.975 63.158 6.32 0.00 0.00 3.55
3375 12983 2.264794 CCGGGACCTACACTGTGC 59.735 66.667 7.90 0.00 0.00 4.57
3376 12984 2.264794 CGGGACCTACACTGTGCC 59.735 66.667 7.90 0.02 40.50 5.01
3403 13093 2.287915 CGGCGATTTCTAACCCATGAAG 59.712 50.000 0.00 0.00 0.00 3.02
3584 13275 1.656587 TGATAGCTGGAACCACCTGT 58.343 50.000 0.00 0.00 39.38 4.00
3585 13276 2.827755 TGATAGCTGGAACCACCTGTA 58.172 47.619 0.00 0.00 39.38 2.74
3638 13329 5.942236 TCACTAGTACGTCCTGTGTAAGAAT 59.058 40.000 0.00 0.00 0.00 2.40
3651 13347 6.742718 CCTGTGTAAGAATGAAAAGCATTACG 59.257 38.462 0.00 0.00 46.90 3.18
3714 13451 5.582269 TCAGAACTCTGTTGTTTCTTCAGTG 59.418 40.000 6.61 0.00 44.12 3.66
3785 13522 4.870363 TGTCTTCAATTTTAAGCAGTGCC 58.130 39.130 12.58 0.00 0.00 5.01
3791 13528 7.609918 TCTTCAATTTTAAGCAGTGCCACTATA 59.390 33.333 12.58 0.00 0.00 1.31
3792 13529 7.083875 TCAATTTTAAGCAGTGCCACTATAC 57.916 36.000 12.58 0.00 0.00 1.47
3839 13576 4.992319 TCTCGTCCGACACAAAATTTACAT 59.008 37.500 0.00 0.00 0.00 2.29
3844 13581 7.009815 TCGTCCGACACAAAATTTACATCTATC 59.990 37.037 0.00 0.00 0.00 2.08
3860 13598 7.846101 ACATCTATCCATCACATCTGTTCTA 57.154 36.000 0.00 0.00 0.00 2.10
3923 13661 5.873179 TTCCGAATTTTAAGCGTGAAGAT 57.127 34.783 0.00 0.00 0.00 2.40
3971 13710 5.474189 GTGTGTGGACTTTAGTACTCTCTCT 59.526 44.000 0.00 0.00 0.00 3.10
3977 13716 5.237779 GGACTTTAGTACTCTCTCTGATCCG 59.762 48.000 0.00 0.00 0.00 4.18
3978 13717 4.577283 ACTTTAGTACTCTCTCTGATCCGC 59.423 45.833 0.00 0.00 0.00 5.54
3979 13718 4.425180 TTAGTACTCTCTCTGATCCGCT 57.575 45.455 0.00 0.00 0.00 5.52
3980 13719 2.571212 AGTACTCTCTCTGATCCGCTG 58.429 52.381 0.00 0.00 0.00 5.18
3981 13720 1.606668 GTACTCTCTCTGATCCGCTGG 59.393 57.143 0.00 0.00 0.00 4.85
3984 13723 1.606668 CTCTCTCTGATCCGCTGGTAC 59.393 57.143 0.00 0.00 0.00 3.34
3985 13724 0.309302 CTCTCTGATCCGCTGGTACG 59.691 60.000 0.00 0.00 0.00 3.67
3986 13725 1.299468 CTCTGATCCGCTGGTACGC 60.299 63.158 0.00 0.00 0.00 4.42
3987 13726 2.279517 CTGATCCGCTGGTACGCC 60.280 66.667 0.00 0.00 0.00 5.68
3988 13727 2.758327 TGATCCGCTGGTACGCCT 60.758 61.111 0.00 0.00 35.27 5.52
3989 13728 2.027751 GATCCGCTGGTACGCCTC 59.972 66.667 0.00 0.00 35.27 4.70
3990 13729 3.825833 GATCCGCTGGTACGCCTCG 62.826 68.421 0.00 0.00 35.27 4.63
3992 13731 4.124351 CCGCTGGTACGCCTCGAA 62.124 66.667 0.00 0.00 34.91 3.71
3993 13732 2.126228 CGCTGGTACGCCTCGAAA 60.126 61.111 0.00 0.00 34.91 3.46
3994 13733 1.735198 CGCTGGTACGCCTCGAAAA 60.735 57.895 0.00 0.00 34.91 2.29
3995 13734 1.785951 GCTGGTACGCCTCGAAAAC 59.214 57.895 0.00 0.00 35.27 2.43
3996 13735 0.947180 GCTGGTACGCCTCGAAAACA 60.947 55.000 0.00 0.00 35.27 2.83
3997 13736 0.788391 CTGGTACGCCTCGAAAACAC 59.212 55.000 0.00 0.00 35.27 3.32
4009 13774 2.675844 TCGAAAACACTTGACACTGGTG 59.324 45.455 0.00 0.00 37.05 4.17
4023 13789 6.876155 TGACACTGGTGTAGTACAAAGTTAA 58.124 36.000 14.37 4.27 45.05 2.01
4058 13824 4.322567 ACCTCTTCAATTCTCAGCTTCAC 58.677 43.478 0.00 0.00 0.00 3.18
4072 13838 2.158957 AGCTTCACAAACTCCGAACTGA 60.159 45.455 0.00 0.00 0.00 3.41
4083 13849 1.423845 CGAACTGAAAATCGGGCCG 59.576 57.895 22.51 22.51 35.49 6.13
4086 13852 1.743394 GAACTGAAAATCGGGCCGAAT 59.257 47.619 34.58 23.66 39.99 3.34
4089 13855 0.962855 TGAAAATCGGGCCGAATGCA 60.963 50.000 34.58 25.53 43.89 3.96
4091 13857 0.823460 AAAATCGGGCCGAATGCATT 59.177 45.000 34.58 19.53 43.89 3.56
4093 13859 1.238439 AATCGGGCCGAATGCATTAG 58.762 50.000 34.58 12.52 43.89 1.73
4094 13860 1.237285 ATCGGGCCGAATGCATTAGC 61.237 55.000 34.58 20.51 43.89 3.09
4098 13864 1.270839 GGGCCGAATGCATTAGCTCTA 60.271 52.381 25.07 0.00 43.89 2.43
4099 13865 2.494059 GGCCGAATGCATTAGCTCTAA 58.506 47.619 25.07 0.00 43.89 2.10
4100 13866 2.481952 GGCCGAATGCATTAGCTCTAAG 59.518 50.000 25.07 9.44 43.89 2.18
4101 13867 3.393800 GCCGAATGCATTAGCTCTAAGA 58.606 45.455 21.09 0.00 42.74 2.10
4102 13868 3.809832 GCCGAATGCATTAGCTCTAAGAA 59.190 43.478 21.09 0.00 42.74 2.52
4103 13869 4.084118 GCCGAATGCATTAGCTCTAAGAAG 60.084 45.833 21.09 4.96 42.74 2.85
4104 13870 4.084118 CCGAATGCATTAGCTCTAAGAAGC 60.084 45.833 12.97 0.00 42.74 3.86
4125 13891 5.735766 AGCTAAAATTCTCGGAAGCTAACT 58.264 37.500 0.00 0.00 38.48 2.24
4127 13893 5.276442 GCTAAAATTCTCGGAAGCTAACTCG 60.276 44.000 0.00 0.00 0.00 4.18
4131 13897 0.531200 CTCGGAAGCTAACTCGGGTT 59.469 55.000 5.71 5.71 39.26 4.11
4147 13913 1.342819 GGGTTGTAGTGCAATTTGGCA 59.657 47.619 0.00 0.00 42.53 4.92
4170 13936 1.743252 CAGGAAAGCCGAGCTCCAC 60.743 63.158 8.47 0.00 38.25 4.02
4185 13951 4.499183 AGCTCCACGTTTAGAAGAATCTG 58.501 43.478 0.00 0.00 37.10 2.90
4186 13952 3.619038 GCTCCACGTTTAGAAGAATCTGG 59.381 47.826 0.00 0.00 37.10 3.86
4187 13953 4.620803 GCTCCACGTTTAGAAGAATCTGGA 60.621 45.833 0.00 0.00 37.10 3.86
4188 13954 5.073311 TCCACGTTTAGAAGAATCTGGAG 57.927 43.478 0.00 0.00 37.10 3.86
4190 13956 5.011738 TCCACGTTTAGAAGAATCTGGAGTT 59.988 40.000 0.00 0.00 37.10 3.01
4192 13958 6.128526 CCACGTTTAGAAGAATCTGGAGTTTC 60.129 42.308 0.00 0.00 37.10 2.78
4193 13959 6.423905 CACGTTTAGAAGAATCTGGAGTTTCA 59.576 38.462 0.00 0.00 37.10 2.69
4203 15892 7.918076 AGAATCTGGAGTTTCACCTATTTACA 58.082 34.615 0.00 0.00 0.00 2.41
4237 15926 5.359009 TCACTACCTAGGAAAACGATTCGAT 59.641 40.000 17.98 0.00 0.00 3.59
4247 15936 3.984508 AACGATTCGATCTCCACGTAT 57.015 42.857 13.95 0.00 33.76 3.06
4261 15950 1.947642 CGTATAGGCGCACGAACCC 60.948 63.158 10.83 0.00 40.56 4.11
4262 15951 1.593479 GTATAGGCGCACGAACCCC 60.593 63.158 10.83 0.00 0.00 4.95
4263 15952 1.759299 TATAGGCGCACGAACCCCT 60.759 57.895 10.83 0.00 0.00 4.79
4264 15953 1.741327 TATAGGCGCACGAACCCCTC 61.741 60.000 10.83 0.00 0.00 4.30
4286 15975 2.236395 AGGGATCTGACCGAATCGTTTT 59.764 45.455 0.82 0.00 0.00 2.43
4295 15984 2.000447 CCGAATCGTTTTCCCTCTCAC 59.000 52.381 0.82 0.00 0.00 3.51
4298 15987 3.263261 GAATCGTTTTCCCTCTCACCTC 58.737 50.000 0.00 0.00 0.00 3.85
4304 15993 0.336737 TTCCCTCTCACCTCTCCCTC 59.663 60.000 0.00 0.00 0.00 4.30
4335 16024 2.014128 CCTCTCCTCGTTCTCTCTGTC 58.986 57.143 0.00 0.00 0.00 3.51
4346 16035 3.254093 TCTCTCTGTCAAACCCTACCA 57.746 47.619 0.00 0.00 0.00 3.25
4351 16040 1.673337 GTCAAACCCTACCACCGCC 60.673 63.158 0.00 0.00 0.00 6.13
4352 16041 2.744709 CAAACCCTACCACCGCCG 60.745 66.667 0.00 0.00 0.00 6.46
4353 16042 4.710167 AAACCCTACCACCGCCGC 62.710 66.667 0.00 0.00 0.00 6.53
4367 16056 4.729918 CCGCCAGGGCTGCTTTCT 62.730 66.667 8.91 0.00 39.32 2.52
4368 16057 3.130160 CGCCAGGGCTGCTTTCTC 61.130 66.667 8.91 0.00 39.32 2.87
4369 16058 3.130160 GCCAGGGCTGCTTTCTCG 61.130 66.667 2.30 0.00 38.26 4.04
4370 16059 3.130160 CCAGGGCTGCTTTCTCGC 61.130 66.667 0.00 0.00 0.00 5.03
4371 16060 3.130160 CAGGGCTGCTTTCTCGCC 61.130 66.667 0.00 0.00 43.03 5.54
4372 16061 3.640407 AGGGCTGCTTTCTCGCCA 61.640 61.111 0.00 0.00 45.53 5.69
4373 16062 3.435186 GGGCTGCTTTCTCGCCAC 61.435 66.667 0.00 0.00 45.53 5.01
4374 16063 3.435186 GGCTGCTTTCTCGCCACC 61.435 66.667 0.00 0.00 43.25 4.61
4375 16064 3.793144 GCTGCTTTCTCGCCACCG 61.793 66.667 0.00 0.00 0.00 4.94
4376 16065 3.121030 CTGCTTTCTCGCCACCGG 61.121 66.667 0.00 0.00 34.56 5.28
4390 16079 2.685380 CCGGCTGGGTCTCTCCTT 60.685 66.667 2.57 0.00 36.25 3.36
4391 16080 2.726351 CCGGCTGGGTCTCTCCTTC 61.726 68.421 2.57 0.00 36.25 3.46
4392 16081 2.896443 GGCTGGGTCTCTCCTTCG 59.104 66.667 0.00 0.00 36.25 3.79
4393 16082 2.185608 GCTGGGTCTCTCCTTCGC 59.814 66.667 0.00 0.00 36.25 4.70
4394 16083 2.896443 CTGGGTCTCTCCTTCGCC 59.104 66.667 0.00 0.00 36.25 5.54
4395 16084 1.684049 CTGGGTCTCTCCTTCGCCT 60.684 63.158 0.00 0.00 36.25 5.52
4396 16085 0.395862 CTGGGTCTCTCCTTCGCCTA 60.396 60.000 0.00 0.00 36.25 3.93
4397 16086 0.683504 TGGGTCTCTCCTTCGCCTAC 60.684 60.000 0.00 0.00 36.25 3.18
4398 16087 0.683504 GGGTCTCTCCTTCGCCTACA 60.684 60.000 0.00 0.00 36.25 2.74
4399 16088 0.741915 GGTCTCTCCTTCGCCTACAG 59.258 60.000 0.00 0.00 0.00 2.74
4400 16089 1.682394 GGTCTCTCCTTCGCCTACAGA 60.682 57.143 0.00 0.00 0.00 3.41
4401 16090 2.303175 GTCTCTCCTTCGCCTACAGAT 58.697 52.381 0.00 0.00 0.00 2.90
4402 16091 2.292292 GTCTCTCCTTCGCCTACAGATC 59.708 54.545 0.00 0.00 0.00 2.75
4403 16092 1.611491 CTCTCCTTCGCCTACAGATCC 59.389 57.143 0.00 0.00 0.00 3.36
4404 16093 0.312416 CTCCTTCGCCTACAGATCCG 59.688 60.000 0.00 0.00 0.00 4.18
4405 16094 1.107538 TCCTTCGCCTACAGATCCGG 61.108 60.000 0.00 0.00 0.00 5.14
4406 16095 1.300233 CTTCGCCTACAGATCCGGC 60.300 63.158 0.00 3.56 40.40 6.13
4407 16096 2.701163 CTTCGCCTACAGATCCGGCC 62.701 65.000 0.00 0.00 40.70 6.13
4408 16097 3.536917 CGCCTACAGATCCGGCCA 61.537 66.667 2.24 0.00 40.70 5.36
4409 16098 2.872388 CGCCTACAGATCCGGCCAT 61.872 63.158 2.24 0.00 40.70 4.40
4410 16099 1.004440 GCCTACAGATCCGGCCATC 60.004 63.158 2.24 0.00 37.86 3.51
4411 16100 1.674057 CCTACAGATCCGGCCATCC 59.326 63.158 2.24 0.00 0.00 3.51
4412 16101 1.674057 CTACAGATCCGGCCATCCC 59.326 63.158 2.24 0.00 0.00 3.85
4413 16102 1.074850 TACAGATCCGGCCATCCCA 60.075 57.895 2.24 0.00 0.00 4.37
4414 16103 1.121407 TACAGATCCGGCCATCCCAG 61.121 60.000 2.24 0.00 0.00 4.45
4415 16104 3.564218 AGATCCGGCCATCCCAGC 61.564 66.667 2.24 0.00 0.00 4.85
4421 16110 2.039462 GGCCATCCCAGCCCTTTT 59.961 61.111 0.00 0.00 45.16 2.27
4422 16111 2.060383 GGCCATCCCAGCCCTTTTC 61.060 63.158 0.00 0.00 45.16 2.29
4423 16112 2.060383 GCCATCCCAGCCCTTTTCC 61.060 63.158 0.00 0.00 0.00 3.13
4424 16113 1.381735 CCATCCCAGCCCTTTTCCC 60.382 63.158 0.00 0.00 0.00 3.97
4425 16114 1.754234 CATCCCAGCCCTTTTCCCG 60.754 63.158 0.00 0.00 0.00 5.14
4426 16115 2.238701 ATCCCAGCCCTTTTCCCGT 61.239 57.895 0.00 0.00 0.00 5.28
4427 16116 2.211468 ATCCCAGCCCTTTTCCCGTC 62.211 60.000 0.00 0.00 0.00 4.79
4428 16117 2.746277 CCAGCCCTTTTCCCGTCG 60.746 66.667 0.00 0.00 0.00 5.12
4429 16118 2.746277 CAGCCCTTTTCCCGTCGG 60.746 66.667 3.60 3.60 0.00 4.79
4430 16119 2.926242 AGCCCTTTTCCCGTCGGA 60.926 61.111 14.39 0.00 35.88 4.55
4431 16120 2.271173 GCCCTTTTCCCGTCGGAT 59.729 61.111 14.39 0.00 38.24 4.18
4432 16121 1.818363 GCCCTTTTCCCGTCGGATC 60.818 63.158 14.39 0.00 38.24 3.36
4433 16122 1.153229 CCCTTTTCCCGTCGGATCC 60.153 63.158 14.39 0.00 38.24 3.36
4434 16123 1.153229 CCTTTTCCCGTCGGATCCC 60.153 63.158 14.39 0.00 38.24 3.85
4435 16124 1.600107 CTTTTCCCGTCGGATCCCA 59.400 57.895 14.39 0.00 38.24 4.37
4436 16125 0.180406 CTTTTCCCGTCGGATCCCAT 59.820 55.000 14.39 0.00 38.24 4.00
4437 16126 0.179468 TTTTCCCGTCGGATCCCATC 59.821 55.000 14.39 0.00 38.24 3.51
4438 16127 1.692173 TTTCCCGTCGGATCCCATCC 61.692 60.000 14.39 0.00 46.22 3.51
4445 16134 4.703703 GGATCCCATCCTTAGCGC 57.296 61.111 0.00 0.00 46.19 5.92
4446 16135 1.003233 GGATCCCATCCTTAGCGCC 60.003 63.158 2.29 0.00 46.19 6.53
4447 16136 1.374758 GATCCCATCCTTAGCGCCG 60.375 63.158 2.29 0.00 0.00 6.46
4448 16137 3.537206 ATCCCATCCTTAGCGCCGC 62.537 63.158 2.29 0.00 0.00 6.53
4449 16138 4.241555 CCCATCCTTAGCGCCGCT 62.242 66.667 18.67 18.67 43.41 5.52
4450 16139 2.734591 CCATCCTTAGCGCCGCTA 59.265 61.111 15.99 15.99 40.44 4.26
4451 16140 1.373497 CCATCCTTAGCGCCGCTAG 60.373 63.158 19.17 12.82 42.34 3.42
4452 16141 1.364171 CATCCTTAGCGCCGCTAGT 59.636 57.895 19.17 4.40 42.34 2.57
4453 16142 0.664767 CATCCTTAGCGCCGCTAGTC 60.665 60.000 19.17 0.00 42.34 2.59
4454 16143 2.131294 ATCCTTAGCGCCGCTAGTCG 62.131 60.000 19.17 11.35 42.34 4.18
4462 16151 3.905678 CCGCTAGTCGCTCCCCTG 61.906 72.222 0.00 0.00 36.73 4.45
4463 16152 3.905678 CGCTAGTCGCTCCCCTGG 61.906 72.222 0.00 0.00 36.13 4.45
4464 16153 4.228567 GCTAGTCGCTCCCCTGGC 62.229 72.222 0.00 0.00 35.14 4.85
4465 16154 3.541713 CTAGTCGCTCCCCTGGCC 61.542 72.222 0.00 0.00 0.00 5.36
4466 16155 4.075793 TAGTCGCTCCCCTGGCCT 62.076 66.667 3.32 0.00 0.00 5.19
4472 16161 4.748144 CTCCCCTGGCCTGGCAAC 62.748 72.222 22.93 4.31 0.00 4.17
4476 16165 3.970410 CCTGGCCTGGCAACCTGA 61.970 66.667 22.05 0.00 0.00 3.86
4477 16166 2.115910 CTGGCCTGGCAACCTGAA 59.884 61.111 22.05 0.00 0.00 3.02
4478 16167 1.531365 CTGGCCTGGCAACCTGAAA 60.531 57.895 22.05 0.00 0.00 2.69
4479 16168 1.075674 TGGCCTGGCAACCTGAAAA 60.076 52.632 22.05 0.00 0.00 2.29
4480 16169 1.367471 GGCCTGGCAACCTGAAAAC 59.633 57.895 22.05 0.00 0.00 2.43
4481 16170 1.115326 GGCCTGGCAACCTGAAAACT 61.115 55.000 22.05 0.00 0.00 2.66
4482 16171 0.752658 GCCTGGCAACCTGAAAACTT 59.247 50.000 15.17 0.00 0.00 2.66
4483 16172 1.138859 GCCTGGCAACCTGAAAACTTT 59.861 47.619 15.17 0.00 0.00 2.66
4484 16173 2.825205 CCTGGCAACCTGAAAACTTTG 58.175 47.619 0.00 0.00 0.00 2.77
4485 16174 2.204237 CTGGCAACCTGAAAACTTTGC 58.796 47.619 0.00 0.00 42.98 3.68
4486 16175 1.830477 TGGCAACCTGAAAACTTTGCT 59.170 42.857 5.25 0.00 43.20 3.91
4487 16176 2.235898 TGGCAACCTGAAAACTTTGCTT 59.764 40.909 5.25 0.00 43.20 3.91
4488 16177 3.449018 TGGCAACCTGAAAACTTTGCTTA 59.551 39.130 5.25 0.00 43.20 3.09
4489 16178 4.051237 GGCAACCTGAAAACTTTGCTTAG 58.949 43.478 5.25 0.00 43.20 2.18
4490 16179 4.202111 GGCAACCTGAAAACTTTGCTTAGA 60.202 41.667 5.25 0.00 43.20 2.10
4491 16180 4.740205 GCAACCTGAAAACTTTGCTTAGAC 59.260 41.667 0.00 0.00 40.97 2.59
4492 16181 5.450550 GCAACCTGAAAACTTTGCTTAGACT 60.451 40.000 0.00 0.00 40.97 3.24
4493 16182 5.757850 ACCTGAAAACTTTGCTTAGACTG 57.242 39.130 0.00 0.00 0.00 3.51
4494 16183 4.580580 ACCTGAAAACTTTGCTTAGACTGG 59.419 41.667 0.00 0.00 0.00 4.00
4495 16184 4.580580 CCTGAAAACTTTGCTTAGACTGGT 59.419 41.667 0.00 0.00 0.00 4.00
4496 16185 5.067805 CCTGAAAACTTTGCTTAGACTGGTT 59.932 40.000 0.00 0.00 0.00 3.67
4497 16186 5.890334 TGAAAACTTTGCTTAGACTGGTTG 58.110 37.500 0.00 0.00 0.00 3.77
4498 16187 5.417580 TGAAAACTTTGCTTAGACTGGTTGT 59.582 36.000 0.00 0.00 0.00 3.32
4499 16188 5.914898 AAACTTTGCTTAGACTGGTTGTT 57.085 34.783 0.00 0.00 0.00 2.83
4500 16189 4.900635 ACTTTGCTTAGACTGGTTGTTG 57.099 40.909 0.00 0.00 0.00 3.33
4501 16190 4.523083 ACTTTGCTTAGACTGGTTGTTGA 58.477 39.130 0.00 0.00 0.00 3.18
4502 16191 4.335594 ACTTTGCTTAGACTGGTTGTTGAC 59.664 41.667 0.00 0.00 0.00 3.18
4510 16199 3.443588 GGTTGTTGACCCAGGCAC 58.556 61.111 0.00 0.00 43.06 5.01
4511 16200 2.200337 GGTTGTTGACCCAGGCACC 61.200 63.158 0.00 0.00 43.06 5.01
4512 16201 1.152756 GTTGTTGACCCAGGCACCT 60.153 57.895 0.00 0.00 0.00 4.00
4513 16202 0.755327 GTTGTTGACCCAGGCACCTT 60.755 55.000 0.00 0.00 0.00 3.50
4514 16203 0.754957 TTGTTGACCCAGGCACCTTG 60.755 55.000 0.00 0.00 0.00 3.61
4515 16204 1.150536 GTTGACCCAGGCACCTTGA 59.849 57.895 0.00 0.00 0.00 3.02
4516 16205 0.251341 GTTGACCCAGGCACCTTGAT 60.251 55.000 0.00 0.00 0.00 2.57
4517 16206 0.482446 TTGACCCAGGCACCTTGATT 59.518 50.000 0.00 0.00 0.00 2.57
4518 16207 1.367346 TGACCCAGGCACCTTGATTA 58.633 50.000 0.00 0.00 0.00 1.75
4519 16208 1.281867 TGACCCAGGCACCTTGATTAG 59.718 52.381 0.00 0.00 0.00 1.73
4520 16209 0.034089 ACCCAGGCACCTTGATTAGC 60.034 55.000 0.00 0.00 0.00 3.09
4524 16213 2.799176 GGCACCTTGATTAGCCTGG 58.201 57.895 0.00 0.00 43.70 4.45
4525 16214 1.387295 GGCACCTTGATTAGCCTGGC 61.387 60.000 11.65 11.65 43.70 4.85
4526 16215 1.387295 GCACCTTGATTAGCCTGGCC 61.387 60.000 16.57 0.00 0.00 5.36
4527 16216 0.753111 CACCTTGATTAGCCTGGCCC 60.753 60.000 16.57 3.00 0.00 5.80
4528 16217 1.214305 ACCTTGATTAGCCTGGCCCA 61.214 55.000 16.57 5.81 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.469469 TTCAGGGACCAAGAGGATTTTT 57.531 40.909 0.00 0.00 38.69 1.94
29 30 4.349342 GTGATATTCAGGGACCAAGAGGAT 59.651 45.833 0.00 0.00 38.69 3.24
37 38 1.344763 CTCCGGTGATATTCAGGGACC 59.655 57.143 0.00 0.00 30.04 4.46
39 40 1.062428 ACCTCCGGTGATATTCAGGGA 60.062 52.381 4.76 0.00 32.98 4.20
116 292 7.766278 GGAATCCACAACTATAGCGATAATCAT 59.234 37.037 0.00 0.00 0.00 2.45
120 296 6.266786 TCAGGAATCCACAACTATAGCGATAA 59.733 38.462 0.61 0.00 0.00 1.75
121 297 5.773176 TCAGGAATCCACAACTATAGCGATA 59.227 40.000 0.61 0.00 0.00 2.92
130 306 5.972107 CTGATTTTCAGGAATCCACAACT 57.028 39.130 0.61 0.00 40.71 3.16
159 335 4.022329 GGGTAAACAAACAGGAATCCACAG 60.022 45.833 0.61 0.00 0.00 3.66
191 385 2.603075 TTTCATAGCCCCTGCAGTTT 57.397 45.000 13.81 0.00 41.13 2.66
199 393 7.054491 ACATTAATGACAATTTCATAGCCCC 57.946 36.000 22.16 0.00 44.86 5.80
211 405 6.071447 CCAACATTCAGGGACATTAATGACAA 60.071 38.462 22.16 6.66 34.26 3.18
264 459 7.065324 GGCTAATTTGCACTTAGTACATGTACA 59.935 37.037 32.02 18.19 35.15 2.90
271 466 5.986004 ATCGGCTAATTTGCACTTAGTAC 57.014 39.130 13.80 8.51 34.04 2.73
296 495 5.123344 TGCATGATCTTGTGAGAAGAATGTG 59.877 40.000 10.05 0.00 35.07 3.21
297 496 5.250982 TGCATGATCTTGTGAGAAGAATGT 58.749 37.500 10.05 0.00 35.07 2.71
299 498 5.585445 GTCTGCATGATCTTGTGAGAAGAAT 59.415 40.000 10.05 0.00 35.07 2.40
300 499 4.934001 GTCTGCATGATCTTGTGAGAAGAA 59.066 41.667 10.05 0.00 35.07 2.52
301 500 4.502016 GTCTGCATGATCTTGTGAGAAGA 58.498 43.478 10.05 0.00 35.07 2.87
302 501 3.622163 GGTCTGCATGATCTTGTGAGAAG 59.378 47.826 10.05 2.15 35.07 2.85
303 502 3.008266 TGGTCTGCATGATCTTGTGAGAA 59.992 43.478 10.05 0.00 35.07 2.87
305 504 2.981898 TGGTCTGCATGATCTTGTGAG 58.018 47.619 10.05 6.87 0.00 3.51
306 505 3.421919 TTGGTCTGCATGATCTTGTGA 57.578 42.857 10.05 6.45 0.00 3.58
307 506 3.119602 CCTTTGGTCTGCATGATCTTGTG 60.120 47.826 10.05 4.45 0.00 3.33
308 507 3.087031 CCTTTGGTCTGCATGATCTTGT 58.913 45.455 10.05 0.00 0.00 3.16
309 508 2.159282 GCCTTTGGTCTGCATGATCTTG 60.159 50.000 0.00 4.25 0.00 3.02
310 509 2.097825 GCCTTTGGTCTGCATGATCTT 58.902 47.619 0.00 0.00 0.00 2.40
311 510 1.284198 AGCCTTTGGTCTGCATGATCT 59.716 47.619 0.00 0.00 0.00 2.75
312 511 1.674962 GAGCCTTTGGTCTGCATGATC 59.325 52.381 0.00 0.00 36.07 2.92
313 512 1.760192 GAGCCTTTGGTCTGCATGAT 58.240 50.000 0.00 0.00 36.07 2.45
315 514 0.957395 ACGAGCCTTTGGTCTGCATG 60.957 55.000 0.00 0.00 36.84 4.06
316 515 0.674895 GACGAGCCTTTGGTCTGCAT 60.675 55.000 0.00 0.00 36.84 3.96
317 516 1.301716 GACGAGCCTTTGGTCTGCA 60.302 57.895 0.00 0.00 36.84 4.41
318 517 0.246635 TAGACGAGCCTTTGGTCTGC 59.753 55.000 3.35 0.00 40.94 4.26
319 518 2.743636 TTAGACGAGCCTTTGGTCTG 57.256 50.000 3.35 0.00 40.94 3.51
320 519 3.260884 TGAATTAGACGAGCCTTTGGTCT 59.739 43.478 0.00 0.00 43.10 3.85
321 520 3.371285 GTGAATTAGACGAGCCTTTGGTC 59.629 47.826 0.00 0.00 35.63 4.02
322 521 3.008049 AGTGAATTAGACGAGCCTTTGGT 59.992 43.478 0.00 0.00 0.00 3.67
324 523 5.411781 ACTAGTGAATTAGACGAGCCTTTG 58.588 41.667 0.00 0.00 0.00 2.77
325 524 5.662674 ACTAGTGAATTAGACGAGCCTTT 57.337 39.130 0.00 0.00 0.00 3.11
326 525 5.887035 AGTACTAGTGAATTAGACGAGCCTT 59.113 40.000 5.39 0.00 0.00 4.35
327 526 5.297278 CAGTACTAGTGAATTAGACGAGCCT 59.703 44.000 5.39 0.00 0.00 4.58
328 527 5.505985 CCAGTACTAGTGAATTAGACGAGCC 60.506 48.000 5.39 0.00 0.00 4.70
330 529 5.066117 TGCCAGTACTAGTGAATTAGACGAG 59.934 44.000 5.39 0.00 0.00 4.18
331 530 4.945543 TGCCAGTACTAGTGAATTAGACGA 59.054 41.667 5.39 0.00 0.00 4.20
332 531 5.244785 TGCCAGTACTAGTGAATTAGACG 57.755 43.478 5.39 0.00 0.00 4.18
333 532 6.043411 CCTTGCCAGTACTAGTGAATTAGAC 58.957 44.000 5.39 0.00 0.00 2.59
350 1601 3.495331 TGATTGCTACTTTTCCTTGCCA 58.505 40.909 0.00 0.00 0.00 4.92
352 1603 4.488879 CCTTGATTGCTACTTTTCCTTGC 58.511 43.478 0.00 0.00 0.00 4.01
363 1614 2.016318 CGTTCCATGCCTTGATTGCTA 58.984 47.619 0.00 0.00 0.00 3.49
384 1635 1.067669 GATGAGGCAGACGAGCATACA 59.932 52.381 0.00 0.00 35.83 2.29
393 1644 6.155475 ACTAGTGAATTAGATGAGGCAGAC 57.845 41.667 0.00 0.00 0.00 3.51
410 1661 5.460571 CATGTACATGTGCTGAACTAGTG 57.539 43.478 24.91 0.00 34.23 2.74
442 1693 0.522076 GCGCTGAAGCTGTGCATAAC 60.522 55.000 0.00 0.00 38.39 1.89
443 1694 0.954938 TGCGCTGAAGCTGTGCATAA 60.955 50.000 9.73 0.00 42.13 1.90
444 1695 1.363885 CTGCGCTGAAGCTGTGCATA 61.364 55.000 9.73 0.00 44.84 3.14
445 1696 2.670592 TGCGCTGAAGCTGTGCAT 60.671 55.556 9.73 0.00 42.13 3.96
451 1702 2.313172 CGTTGACTGCGCTGAAGCT 61.313 57.895 21.92 0.00 39.32 3.74
469 1720 4.770795 AGAACCATCTATGTGTTGTAGCC 58.229 43.478 2.77 0.00 32.88 3.93
477 1728 7.326454 TCTCTCAAAGAAGAACCATCTATGTG 58.674 38.462 0.00 0.00 33.77 3.21
478 1729 7.487822 TCTCTCAAAGAAGAACCATCTATGT 57.512 36.000 0.00 0.00 33.77 2.29
485 1736 6.192970 AGGAATTCTCTCAAAGAAGAACCA 57.807 37.500 5.23 0.00 46.95 3.67
486 1737 8.800370 ATAAGGAATTCTCTCAAAGAAGAACC 57.200 34.615 5.23 0.00 46.95 3.62
490 1741 7.972832 GCCAAATAAGGAATTCTCTCAAAGAAG 59.027 37.037 5.23 0.00 46.95 2.85
496 1747 4.230502 AGGGCCAAATAAGGAATTCTCTCA 59.769 41.667 6.18 0.00 0.00 3.27
497 1748 4.797743 AGGGCCAAATAAGGAATTCTCTC 58.202 43.478 6.18 0.00 0.00 3.20
498 1749 4.888626 AGGGCCAAATAAGGAATTCTCT 57.111 40.909 6.18 0.00 0.00 3.10
499 1750 5.658634 AGAAAGGGCCAAATAAGGAATTCTC 59.341 40.000 6.18 0.00 0.00 2.87
500 1751 5.593786 AGAAAGGGCCAAATAAGGAATTCT 58.406 37.500 6.18 0.00 0.00 2.40
502 1753 7.806680 TTAAGAAAGGGCCAAATAAGGAATT 57.193 32.000 6.18 0.00 0.00 2.17
503 1754 7.806680 TTTAAGAAAGGGCCAAATAAGGAAT 57.193 32.000 6.18 0.00 0.00 3.01
504 1755 7.619512 TTTTAAGAAAGGGCCAAATAAGGAA 57.380 32.000 6.18 0.00 0.00 3.36
505 1756 7.806680 ATTTTAAGAAAGGGCCAAATAAGGA 57.193 32.000 6.18 0.00 0.00 3.36
506 1757 8.729756 CAAATTTTAAGAAAGGGCCAAATAAGG 58.270 33.333 6.18 0.00 0.00 2.69
507 1758 8.236586 GCAAATTTTAAGAAAGGGCCAAATAAG 58.763 33.333 6.18 0.00 0.00 1.73
509 1760 7.457561 AGCAAATTTTAAGAAAGGGCCAAATA 58.542 30.769 6.18 0.00 0.00 1.40
510 1761 6.306199 AGCAAATTTTAAGAAAGGGCCAAAT 58.694 32.000 6.18 0.00 0.00 2.32
511 1762 5.689835 AGCAAATTTTAAGAAAGGGCCAAA 58.310 33.333 6.18 0.00 0.00 3.28
512 1763 5.303259 AGCAAATTTTAAGAAAGGGCCAA 57.697 34.783 6.18 0.00 0.00 4.52
513 1764 4.972751 AGCAAATTTTAAGAAAGGGCCA 57.027 36.364 6.18 0.00 0.00 5.36
517 1768 8.450578 AAAAGGGAAGCAAATTTTAAGAAAGG 57.549 30.769 0.00 0.00 0.00 3.11
518 1769 9.720667 CAAAAAGGGAAGCAAATTTTAAGAAAG 57.279 29.630 0.00 0.00 0.00 2.62
519 1770 8.681806 CCAAAAAGGGAAGCAAATTTTAAGAAA 58.318 29.630 0.00 0.00 0.00 2.52
520 1771 7.201776 GCCAAAAAGGGAAGCAAATTTTAAGAA 60.202 33.333 0.00 0.00 38.09 2.52
521 1772 6.262049 GCCAAAAAGGGAAGCAAATTTTAAGA 59.738 34.615 0.00 0.00 38.09 2.10
522 1773 6.437928 GCCAAAAAGGGAAGCAAATTTTAAG 58.562 36.000 0.00 0.00 38.09 1.85
523 1774 5.300539 GGCCAAAAAGGGAAGCAAATTTTAA 59.699 36.000 0.00 0.00 38.09 1.52
524 1775 4.824537 GGCCAAAAAGGGAAGCAAATTTTA 59.175 37.500 0.00 0.00 38.09 1.52
536 5416 4.343814 TGTCTCTTTTAAGGCCAAAAAGGG 59.656 41.667 28.90 27.59 43.03 3.95
537 5417 5.529581 TGTCTCTTTTAAGGCCAAAAAGG 57.470 39.130 28.90 22.54 41.92 3.11
538 5418 7.841915 TTTTGTCTCTTTTAAGGCCAAAAAG 57.158 32.000 26.09 26.09 42.63 2.27
745 5761 1.750399 CGAAGGATGGGCTGGGTTG 60.750 63.158 0.00 0.00 0.00 3.77
1245 6392 5.485662 AGCAACGAATTACCTTATGCTTC 57.514 39.130 0.00 0.00 39.44 3.86
1262 6414 1.352156 CCTCAACTACCGCGAGCAAC 61.352 60.000 8.23 0.00 0.00 4.17
1268 6420 0.107848 AATTCCCCTCAACTACCGCG 60.108 55.000 0.00 0.00 0.00 6.46
1373 6530 2.858344 CAAACAGGTACGGAAGATAGCG 59.142 50.000 0.00 0.00 0.00 4.26
1385 6542 4.635765 GCAGATTGCAGATACAAACAGGTA 59.364 41.667 0.00 0.00 44.26 3.08
1429 6705 5.925969 AGTTTTGCCAAAAATAGTCATTCCG 59.074 36.000 3.79 0.00 37.59 4.30
1562 7213 2.806818 TCAGATCGGAGTATACACGAGC 59.193 50.000 22.45 22.45 42.65 5.03
1566 7217 9.776158 CAATATTAGTCAGATCGGAGTATACAC 57.224 37.037 10.67 0.00 0.00 2.90
1568 7219 8.679100 AGCAATATTAGTCAGATCGGAGTATAC 58.321 37.037 10.67 0.00 0.00 1.47
1578 7229 9.610705 CCAATAGCATAGCAATATTAGTCAGAT 57.389 33.333 0.00 0.00 0.00 2.90
1597 7248 4.578105 CCTCTTGACATCTTTCCCAATAGC 59.422 45.833 0.00 0.00 0.00 2.97
1742 7493 5.266733 ACAAATGAAGTTGCTGACATTGT 57.733 34.783 0.00 0.00 34.02 2.71
1818 7569 4.720530 AATGTAAGACGTTTTCCGACAC 57.279 40.909 0.00 0.00 40.70 3.67
1819 7570 5.349270 CCATAATGTAAGACGTTTTCCGACA 59.651 40.000 0.00 0.00 40.70 4.35
1822 7573 4.871557 TCCCATAATGTAAGACGTTTTCCG 59.128 41.667 0.00 0.00 44.03 4.30
1824 7575 5.220529 CCGTCCCATAATGTAAGACGTTTTC 60.221 44.000 9.63 0.00 46.62 2.29
1825 7576 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
1827 7578 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
1828 7579 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
1830 7581 3.244112 CCCTCCGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
1836 7592 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
1842 7598 2.378378 AATAGTACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
1843 7599 4.892345 ACTAAAATAGTACTCCCTCCGTCC 59.108 45.833 0.00 0.00 37.23 4.79
1844 7600 5.591877 TCACTAAAATAGTACTCCCTCCGTC 59.408 44.000 0.00 0.00 37.23 4.79
1847 7603 6.786967 TGTCACTAAAATAGTACTCCCTCC 57.213 41.667 0.00 0.00 37.23 4.30
1881 7637 2.164219 CTGATCAATTGACCAAACCCCG 59.836 50.000 11.07 0.00 0.00 5.73
1891 7647 6.962182 AGGAGGTGATTAACTGATCAATTGA 58.038 36.000 11.26 11.26 37.75 2.57
1940 7703 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
1942 7705 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
1943 7706 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1944 7707 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
1945 7708 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
1947 7710 4.378459 GCTTGAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
1948 7711 4.762251 AGCTTGAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
1949 7712 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
1950 7713 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
1951 7714 7.440523 ACTAAGCTTGAGACACTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
1958 7721 8.709646 CGTTTTTATACTAAGCTTGAGACACTT 58.290 33.333 9.86 0.00 0.00 3.16
1959 7722 7.148623 GCGTTTTTATACTAAGCTTGAGACACT 60.149 37.037 9.86 0.00 0.00 3.55
1960 7723 6.954297 GCGTTTTTATACTAAGCTTGAGACAC 59.046 38.462 9.86 0.00 0.00 3.67
1961 7724 6.091713 GGCGTTTTTATACTAAGCTTGAGACA 59.908 38.462 9.86 0.00 0.00 3.41
1962 7725 6.313164 AGGCGTTTTTATACTAAGCTTGAGAC 59.687 38.462 9.86 0.00 0.00 3.36
1963 7726 6.312918 CAGGCGTTTTTATACTAAGCTTGAGA 59.687 38.462 9.86 0.00 33.05 3.27
1964 7727 6.092259 ACAGGCGTTTTTATACTAAGCTTGAG 59.908 38.462 9.86 5.36 34.90 3.02
1965 7728 5.935789 ACAGGCGTTTTTATACTAAGCTTGA 59.064 36.000 9.86 0.00 34.90 3.02
1966 7729 6.092259 AGACAGGCGTTTTTATACTAAGCTTG 59.908 38.462 9.86 1.57 36.51 4.01
1967 7730 6.092259 CAGACAGGCGTTTTTATACTAAGCTT 59.908 38.462 3.48 3.48 0.00 3.74
1968 7731 5.581085 CAGACAGGCGTTTTTATACTAAGCT 59.419 40.000 0.00 0.00 0.00 3.74
1969 7732 5.220605 CCAGACAGGCGTTTTTATACTAAGC 60.221 44.000 0.00 0.00 0.00 3.09
1970 7733 6.103997 TCCAGACAGGCGTTTTTATACTAAG 58.896 40.000 0.00 0.00 37.29 2.18
1971 7734 6.040209 TCCAGACAGGCGTTTTTATACTAA 57.960 37.500 0.00 0.00 37.29 2.24
1972 7735 5.664294 TCCAGACAGGCGTTTTTATACTA 57.336 39.130 0.00 0.00 37.29 1.82
1973 7736 4.546829 TCCAGACAGGCGTTTTTATACT 57.453 40.909 0.00 0.00 37.29 2.12
1974 7737 4.272748 GGATCCAGACAGGCGTTTTTATAC 59.727 45.833 6.95 0.00 37.29 1.47
1975 7738 4.080807 TGGATCCAGACAGGCGTTTTTATA 60.081 41.667 11.44 0.00 37.29 0.98
1976 7739 3.279434 GGATCCAGACAGGCGTTTTTAT 58.721 45.455 6.95 0.00 37.29 1.40
1977 7740 2.039216 TGGATCCAGACAGGCGTTTTTA 59.961 45.455 11.44 0.00 37.29 1.52
1978 7741 1.202879 TGGATCCAGACAGGCGTTTTT 60.203 47.619 11.44 0.00 37.29 1.94
2094 7858 5.591472 CACTGGAATTATGCCATGAGAAGAA 59.409 40.000 0.00 0.00 34.33 2.52
2516 8288 4.806247 CGGAGTTCTAGCAAGTCAATAAGG 59.194 45.833 10.16 0.00 0.00 2.69
2732 8504 9.632807 GTATATCAAATAACACTGTGCCAAAAA 57.367 29.630 7.90 0.00 0.00 1.94
2733 8505 9.019656 AGTATATCAAATAACACTGTGCCAAAA 57.980 29.630 7.90 0.00 0.00 2.44
2734 8506 8.574251 AGTATATCAAATAACACTGTGCCAAA 57.426 30.769 7.90 0.00 0.00 3.28
2735 8507 8.574251 AAGTATATCAAATAACACTGTGCCAA 57.426 30.769 7.90 0.00 0.00 4.52
2736 8508 8.574251 AAAGTATATCAAATAACACTGTGCCA 57.426 30.769 7.90 0.00 0.00 4.92
2755 8527 8.049721 ACAAGAGCCAGAAAGCTATAAAAGTAT 58.950 33.333 0.00 0.00 45.15 2.12
2785 8559 3.441572 ACCTGCAAGTTCACATATGAAGC 59.558 43.478 10.38 0.00 45.58 3.86
2792 8566 2.233271 CAAGGACCTGCAAGTTCACAT 58.767 47.619 0.00 0.00 0.00 3.21
2895 8669 6.428159 CACAAACCTGAGCTAGTTCAAGTATT 59.572 38.462 10.80 5.85 0.00 1.89
2925 8699 6.667370 TGCTTGTATTGTAACATTGTGTCAG 58.333 36.000 0.00 0.00 0.00 3.51
2973 8747 7.790782 AAAATGTACTGTATGGGGATTTTGT 57.209 32.000 0.00 0.00 0.00 2.83
2997 8771 3.453353 ACCTAACCGGCAAAAGAGCTATA 59.547 43.478 0.00 0.00 35.61 1.31
3001 8775 1.736126 GTACCTAACCGGCAAAAGAGC 59.264 52.381 0.00 0.00 35.61 4.09
3012 8786 5.047519 TGTCTTGCTTGTCTAGTACCTAACC 60.048 44.000 0.00 0.00 0.00 2.85
3234 12707 5.381174 TCGTAAAGAGAAAATCCAGACGA 57.619 39.130 0.00 0.00 34.82 4.20
3236 12710 6.757010 TGCTATCGTAAAGAGAAAATCCAGAC 59.243 38.462 0.00 0.00 0.00 3.51
3254 12728 6.128445 GGAATGAACCATGTAGATTGCTATCG 60.128 42.308 2.42 0.00 35.85 2.92
3355 12963 1.975407 ACAGTGTAGGTCCCGGTCG 60.975 63.158 0.00 0.00 0.00 4.79
3375 12983 3.488553 GGGTTAGAAATCGCCGATTTTGG 60.489 47.826 24.31 0.00 41.56 3.28
3376 12984 3.127895 TGGGTTAGAAATCGCCGATTTTG 59.872 43.478 24.31 0.00 41.56 2.44
3403 13093 2.344950 CTCCTGATCACACAACAGAGC 58.655 52.381 0.00 0.00 34.07 4.09
3638 13329 5.047164 TCAGGTACTACCGTAATGCTTTTCA 60.047 40.000 0.00 0.00 44.90 2.69
3651 13347 7.386025 ACACGATTTACTTTTTCAGGTACTACC 59.614 37.037 0.00 0.00 36.02 3.18
3722 13459 2.837532 AAAATTCAACCAGCGCCAAT 57.162 40.000 2.29 0.00 0.00 3.16
3726 13463 2.488153 AGGAGTAAAATTCAACCAGCGC 59.512 45.455 0.00 0.00 0.00 5.92
3785 13522 6.531594 ACTGAAATGATCGTGTGTGTATAGTG 59.468 38.462 0.00 0.00 0.00 2.74
3791 13528 3.673338 CGTACTGAAATGATCGTGTGTGT 59.327 43.478 0.00 0.00 0.00 3.72
3792 13529 3.917985 TCGTACTGAAATGATCGTGTGTG 59.082 43.478 0.00 0.00 0.00 3.82
3887 13625 2.535012 TCGGAATTACTGTGCACACA 57.465 45.000 17.42 3.54 39.32 3.72
3890 13628 6.033513 GCTTAAAATTCGGAATTACTGTGCAC 59.966 38.462 15.80 10.75 0.00 4.57
3945 13683 5.834204 AGAGAGTACTAAAGTCCACACACTT 59.166 40.000 0.00 0.00 38.30 3.16
3971 13710 2.758327 AGGCGTACCAGCGGATCA 60.758 61.111 0.00 0.00 39.06 2.92
3977 13716 0.947180 TGTTTTCGAGGCGTACCAGC 60.947 55.000 0.00 0.00 39.06 4.85
3978 13717 0.788391 GTGTTTTCGAGGCGTACCAG 59.212 55.000 0.00 0.00 39.06 4.00
3979 13718 0.390124 AGTGTTTTCGAGGCGTACCA 59.610 50.000 0.00 0.00 39.06 3.25
3980 13719 1.193874 CAAGTGTTTTCGAGGCGTACC 59.806 52.381 0.00 0.00 0.00 3.34
3981 13720 2.097056 GTCAAGTGTTTTCGAGGCGTAC 60.097 50.000 0.00 0.00 0.00 3.67
3984 13723 0.934496 TGTCAAGTGTTTTCGAGGCG 59.066 50.000 0.00 0.00 0.00 5.52
3985 13724 1.940613 AGTGTCAAGTGTTTTCGAGGC 59.059 47.619 0.00 0.00 0.00 4.70
3986 13725 2.287915 CCAGTGTCAAGTGTTTTCGAGG 59.712 50.000 0.00 0.00 0.00 4.63
3987 13726 2.936498 ACCAGTGTCAAGTGTTTTCGAG 59.064 45.455 0.00 0.00 0.00 4.04
3988 13727 2.675844 CACCAGTGTCAAGTGTTTTCGA 59.324 45.455 0.00 0.00 0.00 3.71
3989 13728 2.418628 ACACCAGTGTCAAGTGTTTTCG 59.581 45.455 0.00 0.00 41.86 3.46
3990 13729 4.634443 ACTACACCAGTGTCAAGTGTTTTC 59.366 41.667 6.72 0.00 41.86 2.29
3991 13730 4.585879 ACTACACCAGTGTCAAGTGTTTT 58.414 39.130 6.72 0.00 41.86 2.43
3992 13731 4.216411 ACTACACCAGTGTCAAGTGTTT 57.784 40.909 6.72 0.00 41.86 2.83
3993 13732 3.906720 ACTACACCAGTGTCAAGTGTT 57.093 42.857 6.72 0.00 41.86 3.32
3994 13733 3.702548 TGTACTACACCAGTGTCAAGTGT 59.297 43.478 6.72 7.82 46.09 3.55
3995 13734 4.316205 TGTACTACACCAGTGTCAAGTG 57.684 45.455 6.72 0.00 43.74 3.16
3996 13735 5.105064 ACTTTGTACTACACCAGTGTCAAGT 60.105 40.000 6.72 8.94 43.74 3.16
3997 13736 5.357257 ACTTTGTACTACACCAGTGTCAAG 58.643 41.667 6.72 2.97 43.74 3.02
4009 13774 8.883954 AAGAACAGGTCTTAACTTTGTACTAC 57.116 34.615 0.00 0.00 45.18 2.73
4023 13789 5.888982 TTGAAGAGGTTAAGAACAGGTCT 57.111 39.130 0.00 0.00 38.69 3.85
4041 13807 5.009010 GGAGTTTGTGAAGCTGAGAATTGAA 59.991 40.000 0.00 0.00 0.00 2.69
4042 13808 4.516698 GGAGTTTGTGAAGCTGAGAATTGA 59.483 41.667 0.00 0.00 0.00 2.57
4072 13838 0.823460 AATGCATTCGGCCCGATTTT 59.177 45.000 6.69 0.00 43.89 1.82
4093 13859 6.043411 TCCGAGAATTTTAGCTTCTTAGAGC 58.957 40.000 0.00 0.00 43.02 4.09
4094 13860 7.254286 GCTTCCGAGAATTTTAGCTTCTTAGAG 60.254 40.741 0.00 0.00 33.18 2.43
4098 13864 5.249420 AGCTTCCGAGAATTTTAGCTTCTT 58.751 37.500 0.00 0.00 35.59 2.52
4099 13865 4.837972 AGCTTCCGAGAATTTTAGCTTCT 58.162 39.130 0.00 0.00 35.59 2.85
4100 13866 6.314152 AGTTAGCTTCCGAGAATTTTAGCTTC 59.686 38.462 0.00 0.00 39.48 3.86
4101 13867 6.174049 AGTTAGCTTCCGAGAATTTTAGCTT 58.826 36.000 0.00 0.00 39.48 3.74
4102 13868 5.735766 AGTTAGCTTCCGAGAATTTTAGCT 58.264 37.500 0.00 0.00 41.44 3.32
4103 13869 5.276442 CGAGTTAGCTTCCGAGAATTTTAGC 60.276 44.000 0.00 0.00 0.00 3.09
4104 13870 5.232414 CCGAGTTAGCTTCCGAGAATTTTAG 59.768 44.000 0.00 0.00 0.00 1.85
4105 13871 5.107133 CCGAGTTAGCTTCCGAGAATTTTA 58.893 41.667 0.00 0.00 0.00 1.52
4106 13872 3.933332 CCGAGTTAGCTTCCGAGAATTTT 59.067 43.478 0.00 0.00 0.00 1.82
4107 13873 3.522553 CCGAGTTAGCTTCCGAGAATTT 58.477 45.455 0.00 0.00 0.00 1.82
4108 13874 2.159085 CCCGAGTTAGCTTCCGAGAATT 60.159 50.000 0.00 0.00 0.00 2.17
4109 13875 1.409427 CCCGAGTTAGCTTCCGAGAAT 59.591 52.381 0.00 0.00 0.00 2.40
4110 13876 0.815734 CCCGAGTTAGCTTCCGAGAA 59.184 55.000 0.00 0.00 0.00 2.87
4111 13877 0.323178 ACCCGAGTTAGCTTCCGAGA 60.323 55.000 0.00 0.00 0.00 4.04
4112 13878 0.531200 AACCCGAGTTAGCTTCCGAG 59.469 55.000 0.00 0.00 33.27 4.63
4113 13879 0.245539 CAACCCGAGTTAGCTTCCGA 59.754 55.000 0.00 0.00 33.27 4.55
4114 13880 0.037605 ACAACCCGAGTTAGCTTCCG 60.038 55.000 0.00 0.00 33.27 4.30
4115 13881 2.233186 ACTACAACCCGAGTTAGCTTCC 59.767 50.000 0.00 0.00 33.27 3.46
4125 13891 1.883275 CCAAATTGCACTACAACCCGA 59.117 47.619 0.00 0.00 42.27 5.14
4127 13893 1.342819 TGCCAAATTGCACTACAACCC 59.657 47.619 0.00 0.00 42.27 4.11
4131 13897 2.753296 GCTTTGCCAAATTGCACTACA 58.247 42.857 0.00 0.00 41.88 2.74
4147 13913 1.973812 GCTCGGCTTTCCTGGCTTT 60.974 57.895 0.00 0.00 0.00 3.51
4170 13936 6.128526 GGTGAAACTCCAGATTCTTCTAAACG 60.129 42.308 0.00 0.00 36.74 3.60
4203 15892 9.614792 GTTTTCCTAGGTAGTGACATATTGATT 57.385 33.333 9.08 0.00 0.00 2.57
4213 15902 4.701651 TCGAATCGTTTTCCTAGGTAGTGA 59.298 41.667 9.08 2.44 0.00 3.41
4216 15905 6.074544 AGATCGAATCGTTTTCCTAGGTAG 57.925 41.667 9.08 0.00 0.00 3.18
4217 15906 5.009410 GGAGATCGAATCGTTTTCCTAGGTA 59.991 44.000 13.85 0.00 0.00 3.08
4218 15907 4.202131 GGAGATCGAATCGTTTTCCTAGGT 60.202 45.833 13.85 0.00 0.00 3.08
4221 15910 4.679662 GTGGAGATCGAATCGTTTTCCTA 58.320 43.478 19.46 7.65 0.00 2.94
4237 15926 1.731700 GTGCGCCTATACGTGGAGA 59.268 57.895 4.18 0.00 34.88 3.71
4263 15952 1.032794 CGATTCGGTCAGATCCCTGA 58.967 55.000 0.00 0.00 46.48 3.86
4264 15953 0.747255 ACGATTCGGTCAGATCCCTG 59.253 55.000 11.29 0.00 41.74 4.45
4265 15954 1.486211 AACGATTCGGTCAGATCCCT 58.514 50.000 11.29 0.00 0.00 4.20
4266 15955 2.311124 AAACGATTCGGTCAGATCCC 57.689 50.000 11.29 0.00 0.00 3.85
4269 15958 2.236395 AGGGAAAACGATTCGGTCAGAT 59.764 45.455 11.29 0.00 0.00 2.90
4286 15975 1.927569 CGAGGGAGAGGTGAGAGGGA 61.928 65.000 0.00 0.00 0.00 4.20
4295 15984 1.405661 GGTTAGCAAACGAGGGAGAGG 60.406 57.143 0.00 0.00 36.39 3.69
4298 15987 0.613777 AGGGTTAGCAAACGAGGGAG 59.386 55.000 0.00 0.00 36.39 4.30
4304 15993 1.736032 CGAGGAGAGGGTTAGCAAACG 60.736 57.143 0.00 0.00 36.39 3.60
4335 16024 2.744709 CGGCGGTGGTAGGGTTTG 60.745 66.667 0.00 0.00 0.00 2.93
4352 16041 3.130160 CGAGAAAGCAGCCCTGGC 61.130 66.667 0.00 0.00 42.33 4.85
4353 16042 3.130160 GCGAGAAAGCAGCCCTGG 61.130 66.667 0.00 0.00 37.05 4.45
4354 16043 3.130160 GGCGAGAAAGCAGCCCTG 61.130 66.667 0.00 0.00 44.80 4.45
4358 16047 3.793144 CGGTGGCGAGAAAGCAGC 61.793 66.667 0.00 0.00 39.27 5.25
4359 16048 3.121030 CCGGTGGCGAGAAAGCAG 61.121 66.667 0.00 0.00 39.27 4.24
4373 16062 2.685380 AAGGAGAGACCCAGCCGG 60.685 66.667 0.00 0.00 40.05 6.13
4374 16063 2.896443 GAAGGAGAGACCCAGCCG 59.104 66.667 0.00 0.00 40.05 5.52
4375 16064 2.896443 CGAAGGAGAGACCCAGCC 59.104 66.667 0.00 0.00 40.05 4.85
4376 16065 2.185608 GCGAAGGAGAGACCCAGC 59.814 66.667 0.00 0.00 40.05 4.85
4377 16066 0.395862 TAGGCGAAGGAGAGACCCAG 60.396 60.000 0.00 0.00 40.05 4.45
4378 16067 0.683504 GTAGGCGAAGGAGAGACCCA 60.684 60.000 0.00 0.00 40.05 4.51
4379 16068 0.683504 TGTAGGCGAAGGAGAGACCC 60.684 60.000 0.00 0.00 40.05 4.46
4380 16069 0.741915 CTGTAGGCGAAGGAGAGACC 59.258 60.000 0.00 0.00 39.35 3.85
4381 16070 1.752683 TCTGTAGGCGAAGGAGAGAC 58.247 55.000 0.00 0.00 0.00 3.36
4382 16071 2.577700 GATCTGTAGGCGAAGGAGAGA 58.422 52.381 0.00 0.00 0.00 3.10
4383 16072 1.611491 GGATCTGTAGGCGAAGGAGAG 59.389 57.143 0.00 0.00 0.00 3.20
4384 16073 1.693627 GGATCTGTAGGCGAAGGAGA 58.306 55.000 0.00 0.00 0.00 3.71
4385 16074 0.312416 CGGATCTGTAGGCGAAGGAG 59.688 60.000 0.00 0.00 0.00 3.69
4386 16075 1.107538 CCGGATCTGTAGGCGAAGGA 61.108 60.000 0.00 0.00 0.00 3.36
4387 16076 1.364171 CCGGATCTGTAGGCGAAGG 59.636 63.158 0.00 0.00 0.00 3.46
4388 16077 1.300233 GCCGGATCTGTAGGCGAAG 60.300 63.158 5.05 0.00 41.53 3.79
4389 16078 2.812499 GCCGGATCTGTAGGCGAA 59.188 61.111 5.05 0.00 41.53 4.70
4393 16082 1.674057 GGATGGCCGGATCTGTAGG 59.326 63.158 5.05 0.00 0.00 3.18
4394 16083 1.121407 TGGGATGGCCGGATCTGTAG 61.121 60.000 5.05 0.00 33.83 2.74
4395 16084 1.074850 TGGGATGGCCGGATCTGTA 60.075 57.895 5.05 0.00 33.83 2.74
4396 16085 2.366837 TGGGATGGCCGGATCTGT 60.367 61.111 5.05 0.00 33.83 3.41
4397 16086 2.429058 CTGGGATGGCCGGATCTG 59.571 66.667 5.05 0.00 33.83 2.90
4398 16087 3.564218 GCTGGGATGGCCGGATCT 61.564 66.667 5.05 0.00 33.83 2.75
4399 16088 4.650377 GGCTGGGATGGCCGGATC 62.650 72.222 5.05 0.00 40.19 3.36
4405 16094 2.060383 GGAAAAGGGCTGGGATGGC 61.060 63.158 0.00 0.00 0.00 4.40
4406 16095 1.381735 GGGAAAAGGGCTGGGATGG 60.382 63.158 0.00 0.00 0.00 3.51
4407 16096 1.754234 CGGGAAAAGGGCTGGGATG 60.754 63.158 0.00 0.00 0.00 3.51
4408 16097 2.211468 GACGGGAAAAGGGCTGGGAT 62.211 60.000 0.00 0.00 0.00 3.85
4409 16098 2.856988 ACGGGAAAAGGGCTGGGA 60.857 61.111 0.00 0.00 0.00 4.37
4410 16099 2.361230 GACGGGAAAAGGGCTGGG 60.361 66.667 0.00 0.00 0.00 4.45
4411 16100 2.746277 CGACGGGAAAAGGGCTGG 60.746 66.667 0.00 0.00 0.00 4.85
4412 16101 2.746277 CCGACGGGAAAAGGGCTG 60.746 66.667 5.81 0.00 34.06 4.85
4413 16102 2.926242 TCCGACGGGAAAAGGGCT 60.926 61.111 15.25 0.00 40.15 5.19
4429 16118 1.374758 CGGCGCTAAGGATGGGATC 60.375 63.158 7.64 0.00 0.00 3.36
4430 16119 2.743718 CGGCGCTAAGGATGGGAT 59.256 61.111 7.64 0.00 0.00 3.85
4431 16120 4.235762 GCGGCGCTAAGGATGGGA 62.236 66.667 26.86 0.00 0.00 4.37
4432 16121 2.771763 CTAGCGGCGCTAAGGATGGG 62.772 65.000 37.16 22.42 40.82 4.00
4433 16122 1.373497 CTAGCGGCGCTAAGGATGG 60.373 63.158 37.16 23.09 40.82 3.51
4434 16123 0.664767 GACTAGCGGCGCTAAGGATG 60.665 60.000 37.16 27.91 40.82 3.51
4435 16124 1.660917 GACTAGCGGCGCTAAGGAT 59.339 57.895 37.16 24.39 40.82 3.24
4436 16125 2.831366 CGACTAGCGGCGCTAAGGA 61.831 63.158 37.16 21.26 40.82 3.36
4437 16126 2.353607 CGACTAGCGGCGCTAAGG 60.354 66.667 37.16 29.22 40.82 2.69
4448 16137 3.541713 GGCCAGGGGAGCGACTAG 61.542 72.222 0.00 0.00 0.00 2.57
4449 16138 4.075793 AGGCCAGGGGAGCGACTA 62.076 66.667 5.01 0.00 0.00 2.59
4455 16144 4.748144 GTTGCCAGGCCAGGGGAG 62.748 72.222 17.13 0.00 0.00 4.30
4459 16148 3.512154 TTCAGGTTGCCAGGCCAGG 62.512 63.158 10.48 10.48 0.00 4.45
4460 16149 1.114722 TTTTCAGGTTGCCAGGCCAG 61.115 55.000 9.64 0.00 0.00 4.85
4461 16150 1.075674 TTTTCAGGTTGCCAGGCCA 60.076 52.632 9.64 0.00 0.00 5.36
4462 16151 1.115326 AGTTTTCAGGTTGCCAGGCC 61.115 55.000 9.64 0.00 0.00 5.19
4463 16152 0.752658 AAGTTTTCAGGTTGCCAGGC 59.247 50.000 3.66 3.66 0.00 4.85
4464 16153 2.825205 CAAAGTTTTCAGGTTGCCAGG 58.175 47.619 0.00 0.00 0.00 4.45
4465 16154 2.159057 AGCAAAGTTTTCAGGTTGCCAG 60.159 45.455 3.75 0.00 45.93 4.85
4466 16155 1.830477 AGCAAAGTTTTCAGGTTGCCA 59.170 42.857 3.75 0.00 45.93 4.92
4467 16156 2.602257 AGCAAAGTTTTCAGGTTGCC 57.398 45.000 3.75 0.00 45.93 4.52
4468 16157 4.740205 GTCTAAGCAAAGTTTTCAGGTTGC 59.260 41.667 0.00 0.00 45.29 4.17
4469 16158 5.973565 CAGTCTAAGCAAAGTTTTCAGGTTG 59.026 40.000 0.00 0.00 0.00 3.77
4470 16159 5.067805 CCAGTCTAAGCAAAGTTTTCAGGTT 59.932 40.000 0.00 0.00 0.00 3.50
4471 16160 4.580580 CCAGTCTAAGCAAAGTTTTCAGGT 59.419 41.667 0.00 0.00 0.00 4.00
4472 16161 4.580580 ACCAGTCTAAGCAAAGTTTTCAGG 59.419 41.667 0.00 0.00 0.00 3.86
4473 16162 5.757850 ACCAGTCTAAGCAAAGTTTTCAG 57.242 39.130 0.00 0.00 0.00 3.02
4474 16163 5.417580 ACAACCAGTCTAAGCAAAGTTTTCA 59.582 36.000 0.00 0.00 0.00 2.69
4475 16164 5.891451 ACAACCAGTCTAAGCAAAGTTTTC 58.109 37.500 0.00 0.00 0.00 2.29
4476 16165 5.914898 ACAACCAGTCTAAGCAAAGTTTT 57.085 34.783 0.00 0.00 0.00 2.43
4477 16166 5.417580 TCAACAACCAGTCTAAGCAAAGTTT 59.582 36.000 0.00 0.00 0.00 2.66
4478 16167 4.947388 TCAACAACCAGTCTAAGCAAAGTT 59.053 37.500 0.00 0.00 0.00 2.66
4479 16168 4.335594 GTCAACAACCAGTCTAAGCAAAGT 59.664 41.667 0.00 0.00 0.00 2.66
4480 16169 4.848757 GTCAACAACCAGTCTAAGCAAAG 58.151 43.478 0.00 0.00 0.00 2.77
4481 16170 4.893424 GTCAACAACCAGTCTAAGCAAA 57.107 40.909 0.00 0.00 0.00 3.68
4494 16183 0.755327 AAGGTGCCTGGGTCAACAAC 60.755 55.000 0.00 0.00 0.00 3.32
4495 16184 0.754957 CAAGGTGCCTGGGTCAACAA 60.755 55.000 0.00 0.00 0.00 2.83
4496 16185 1.152777 CAAGGTGCCTGGGTCAACA 60.153 57.895 0.00 0.00 0.00 3.33
4497 16186 0.251341 ATCAAGGTGCCTGGGTCAAC 60.251 55.000 0.00 0.00 0.00 3.18
4498 16187 0.482446 AATCAAGGTGCCTGGGTCAA 59.518 50.000 0.00 0.00 0.00 3.18
4499 16188 1.281867 CTAATCAAGGTGCCTGGGTCA 59.718 52.381 0.00 0.00 0.00 4.02
4500 16189 2.019156 GCTAATCAAGGTGCCTGGGTC 61.019 57.143 0.00 0.00 0.00 4.46
4501 16190 0.034089 GCTAATCAAGGTGCCTGGGT 60.034 55.000 0.00 0.00 0.00 4.51
4502 16191 0.753111 GGCTAATCAAGGTGCCTGGG 60.753 60.000 0.00 0.00 41.92 4.45
4503 16192 2.799176 GGCTAATCAAGGTGCCTGG 58.201 57.895 0.00 0.00 41.92 4.45
4506 16195 1.387295 GCCAGGCTAATCAAGGTGCC 61.387 60.000 3.29 0.00 45.21 5.01
4507 16196 1.387295 GGCCAGGCTAATCAAGGTGC 61.387 60.000 12.43 0.00 0.00 5.01
4508 16197 0.753111 GGGCCAGGCTAATCAAGGTG 60.753 60.000 12.43 0.00 0.00 4.00
4509 16198 1.214305 TGGGCCAGGCTAATCAAGGT 61.214 55.000 12.43 0.00 0.00 3.50
4510 16199 1.614711 TGGGCCAGGCTAATCAAGG 59.385 57.895 12.43 0.00 0.00 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.