Multiple sequence alignment - TraesCS5A01G315100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G315100 chr5A 100.000 9940 0 0 1 9940 525704082 525714021 0.000000e+00 18356.0
1 TraesCS5A01G315100 chr5A 94.511 1257 58 7 6069 7321 525928074 525929323 0.000000e+00 1929.0
2 TraesCS5A01G315100 chr5A 94.352 1257 61 6 6069 7321 525839411 525840661 0.000000e+00 1919.0
3 TraesCS5A01G315100 chr5A 94.268 1256 68 4 6069 7321 525741572 525742826 0.000000e+00 1917.0
4 TraesCS5A01G315100 chr5A 93.512 894 51 6 5061 5948 525740664 525741556 0.000000e+00 1323.0
5 TraesCS5A01G315100 chr5A 93.498 892 53 4 5061 5948 525838508 525839398 0.000000e+00 1321.0
6 TraesCS5A01G315100 chr5A 92.713 892 59 5 5061 5948 525927169 525928058 0.000000e+00 1282.0
7 TraesCS5A01G315100 chr5A 90.244 902 59 17 8115 9014 526285280 526286154 0.000000e+00 1151.0
8 TraesCS5A01G315100 chr5A 92.414 725 41 8 7323 8034 526284559 526285282 0.000000e+00 1022.0
9 TraesCS5A01G315100 chr5A 92.731 454 31 2 7582 8034 525930565 525931017 0.000000e+00 654.0
10 TraesCS5A01G315100 chr5A 90.798 489 37 6 4629 5111 525838124 525838610 0.000000e+00 647.0
11 TraesCS5A01G315100 chr5A 90.593 489 38 6 4629 5111 525740280 525740766 8.420000e-180 641.0
12 TraesCS5A01G315100 chr5A 89.919 496 40 8 4624 5111 525926778 525927271 1.820000e-176 630.0
13 TraesCS5A01G315100 chr5A 92.092 392 25 3 9272 9662 526286152 526286538 1.890000e-151 547.0
14 TraesCS5A01G315100 chr5A 90.617 405 36 1 4182 4586 526279759 526280161 4.090000e-148 536.0
15 TraesCS5A01G315100 chr5A 91.906 383 25 3 8115 8491 525931015 525931397 1.900000e-146 531.0
16 TraesCS5A01G315100 chr5A 91.094 393 25 6 9272 9662 525750815 525751199 3.180000e-144 523.0
17 TraesCS5A01G315100 chr5A 89.877 405 39 1 4182 4586 525925878 525926280 4.110000e-143 520.0
18 TraesCS5A01G315100 chr5A 75.986 1166 166 65 1004 2114 525738207 525739313 1.930000e-136 497.0
19 TraesCS5A01G315100 chr5A 85.047 428 52 9 686 1109 525737839 525738258 9.230000e-115 425.0
20 TraesCS5A01G315100 chr5A 84.706 425 53 7 689 1109 525835734 525836150 2.000000e-111 414.0
21 TraesCS5A01G315100 chr5A 77.654 716 98 33 1004 1695 525836099 525836776 7.290000e-101 379.0
22 TraesCS5A01G315100 chr5A 93.701 254 13 3 7323 7575 525744262 525744513 2.620000e-100 377.0
23 TraesCS5A01G315100 chr5A 93.676 253 15 1 7323 7575 525747129 525747380 2.620000e-100 377.0
24 TraesCS5A01G315100 chr5A 77.361 720 94 32 1004 1695 525924751 525925429 7.340000e-96 363.0
25 TraesCS5A01G315100 chr5A 96.591 88 3 0 8033 8120 222765380 222765467 8.050000e-31 147.0
26 TraesCS5A01G315100 chr5A 95.946 74 3 0 9707 9780 526286536 526286609 4.880000e-23 121.0
27 TraesCS5A01G315100 chr5A 88.421 95 11 0 34 128 46430911 46431005 2.270000e-21 115.0
28 TraesCS5A01G315100 chr1B 98.959 1825 19 0 2354 4178 69842445 69840621 0.000000e+00 3265.0
29 TraesCS5A01G315100 chr1B 98.745 1833 23 0 2354 4186 655771336 655769504 0.000000e+00 3258.0
30 TraesCS5A01G315100 chr1B 99.206 126 1 0 2228 2353 32880513 32880638 2.790000e-55 228.0
31 TraesCS5A01G315100 chr1B 91.045 134 11 1 5930 6062 17963288 17963155 7.930000e-41 180.0
32 TraesCS5A01G315100 chr1B 95.455 88 4 0 8030 8117 636772332 636772245 3.740000e-29 141.0
33 TraesCS5A01G315100 chr1B 93.333 90 6 0 8033 8122 117222178 117222089 6.260000e-27 134.0
34 TraesCS5A01G315100 chr1A 98.851 1828 21 0 2351 4178 136930838 136932665 0.000000e+00 3260.0
35 TraesCS5A01G315100 chr1A 98.798 1830 22 0 2354 4183 517046991 517045162 0.000000e+00 3258.0
36 TraesCS5A01G315100 chr1A 79.818 550 94 14 14 551 285979891 285980435 1.570000e-102 385.0
37 TraesCS5A01G315100 chr1A 81.366 322 46 8 34 343 496626584 496626265 5.960000e-62 250.0
38 TraesCS5A01G315100 chr1A 97.436 117 3 0 5945 6061 551822848 551822732 6.090000e-47 200.0
39 TraesCS5A01G315100 chr1A 93.333 120 8 0 5945 6064 467158659 467158778 2.850000e-40 178.0
40 TraesCS5A01G315100 chr5D 98.851 1827 21 0 2354 4180 565527198 565525372 0.000000e+00 3258.0
41 TraesCS5A01G315100 chr5D 93.907 1986 68 20 6069 8034 413438283 413440235 0.000000e+00 2948.0
42 TraesCS5A01G315100 chr5D 95.220 1297 52 6 6035 7321 413571686 413572982 0.000000e+00 2043.0
43 TraesCS5A01G315100 chr5D 95.471 1104 44 5 6069 7168 413601375 413602476 0.000000e+00 1757.0
44 TraesCS5A01G315100 chr5D 96.245 932 29 3 4182 5111 413436556 413437483 0.000000e+00 1522.0
45 TraesCS5A01G315100 chr5D 96.409 891 23 6 5061 5946 413437382 413438268 0.000000e+00 1459.0
46 TraesCS5A01G315100 chr5D 93.545 914 53 5 5061 5971 413570664 413571574 0.000000e+00 1356.0
47 TraesCS5A01G315100 chr5D 93.995 866 47 4 5061 5922 413600491 413601355 0.000000e+00 1306.0
48 TraesCS5A01G315100 chr5D 90.844 983 62 24 1168 2145 413435557 413436516 0.000000e+00 1291.0
49 TraesCS5A01G315100 chr5D 95.603 796 25 3 9145 9940 413448091 413448876 0.000000e+00 1267.0
50 TraesCS5A01G315100 chr5D 90.022 902 59 17 8115 9014 413468954 413469826 0.000000e+00 1138.0
51 TraesCS5A01G315100 chr5D 89.298 897 51 18 8115 9010 413604747 413605599 0.000000e+00 1083.0
52 TraesCS5A01G315100 chr5D 93.803 710 40 2 8457 9165 413447337 413448043 0.000000e+00 1064.0
53 TraesCS5A01G315100 chr5D 93.241 725 35 8 7323 8034 413604026 413604749 0.000000e+00 1055.0
54 TraesCS5A01G315100 chr5D 93.084 723 37 7 7323 8034 413574195 413574915 0.000000e+00 1046.0
55 TraesCS5A01G315100 chr5D 92.276 725 42 8 7323 8034 413468233 413468956 0.000000e+00 1016.0
56 TraesCS5A01G315100 chr5D 93.423 669 38 4 8115 8782 413574913 413575576 0.000000e+00 987.0
57 TraesCS5A01G315100 chr5D 92.035 565 13 9 609 1159 413434932 413435478 0.000000e+00 765.0
58 TraesCS5A01G315100 chr5D 91.207 489 36 5 4629 5111 413570279 413570766 0.000000e+00 658.0
59 TraesCS5A01G315100 chr5D 85.844 551 40 20 1720 2235 413598719 413599266 1.460000e-152 551.0
60 TraesCS5A01G315100 chr5D 92.092 392 25 3 9272 9662 413469824 413470210 1.890000e-151 547.0
61 TraesCS5A01G315100 chr5D 91.774 389 26 3 9272 9659 413605600 413605983 4.090000e-148 536.0
62 TraesCS5A01G315100 chr5D 85.118 551 44 20 1720 2235 413568817 413569364 6.840000e-146 529.0
63 TraesCS5A01G315100 chr5D 90.148 406 35 4 4182 4586 413569343 413569744 3.180000e-144 523.0
64 TraesCS5A01G315100 chr5D 91.071 392 23 6 9272 9662 413575768 413576148 4.110000e-143 520.0
65 TraesCS5A01G315100 chr5D 86.986 438 37 4 686 1109 413567820 413568251 9.030000e-130 475.0
66 TraesCS5A01G315100 chr5D 77.604 893 113 44 1004 1858 413598052 413598895 2.530000e-125 460.0
67 TraesCS5A01G315100 chr5D 86.105 439 39 6 686 1109 413597672 413598103 4.230000e-123 453.0
68 TraesCS5A01G315100 chr5D 95.703 256 8 1 8115 8370 413440233 413440485 9.290000e-110 409.0
69 TraesCS5A01G315100 chr5D 80.372 591 69 32 1283 1856 413568431 413568991 1.200000e-108 405.0
70 TraesCS5A01G315100 chr5D 91.724 290 19 3 4629 4913 413600153 413600442 2.010000e-106 398.0
71 TraesCS5A01G315100 chr5D 81.857 474 66 16 5486 5946 413612657 413613123 2.030000e-101 381.0
72 TraesCS5A01G315100 chr5D 81.604 424 74 4 136 557 536533080 536532659 2.050000e-91 348.0
73 TraesCS5A01G315100 chr5D 91.250 240 18 2 4629 4866 413599916 413600154 3.460000e-84 324.0
74 TraesCS5A01G315100 chr5D 81.509 411 52 11 4184 4592 413448795 413449183 5.790000e-82 316.0
75 TraesCS5A01G315100 chr5D 93.333 180 10 2 8836 9014 413575592 413575770 2.130000e-66 265.0
76 TraesCS5A01G315100 chr5D 96.296 135 5 0 7187 7321 413456570 413456704 1.300000e-53 222.0
77 TraesCS5A01G315100 chr5D 79.050 358 37 19 5500 5838 413671177 413671515 2.810000e-50 211.0
78 TraesCS5A01G315100 chr5D 92.053 151 9 2 4629 4777 413570014 413570163 1.010000e-49 209.0
79 TraesCS5A01G315100 chr5D 79.592 294 44 15 9433 9718 413436178 413436463 7.880000e-46 196.0
80 TraesCS5A01G315100 chr5D 96.610 118 3 1 7204 7321 413584458 413584574 2.830000e-45 195.0
81 TraesCS5A01G315100 chr5D 97.297 111 3 0 7211 7321 413602466 413602576 1.320000e-43 189.0
82 TraesCS5A01G315100 chr5D 93.496 123 8 0 5945 6067 473359883 473359761 6.130000e-42 183.0
83 TraesCS5A01G315100 chr5D 98.649 74 1 0 9707 9780 413576146 413576219 2.250000e-26 132.0
84 TraesCS5A01G315100 chr5D 87.500 112 8 5 1785 1891 413568846 413568956 3.770000e-24 124.0
85 TraesCS5A01G315100 chr5D 87.500 112 8 5 1785 1891 413598748 413598858 3.770000e-24 124.0
86 TraesCS5A01G315100 chr5D 93.750 64 4 0 9707 9770 413470208 413470271 8.220000e-16 97.1
87 TraesCS5A01G315100 chr3A 98.798 1830 22 0 2351 4180 46612607 46614436 0.000000e+00 3258.0
88 TraesCS5A01G315100 chr3A 81.579 532 84 10 28 546 558879596 558880126 2.570000e-115 427.0
89 TraesCS5A01G315100 chr3A 100.000 123 0 0 2231 2353 734457910 734457788 2.790000e-55 228.0
90 TraesCS5A01G315100 chr2A 98.798 1830 22 0 2351 4180 748455033 748456862 0.000000e+00 3258.0
91 TraesCS5A01G315100 chr4B 98.638 1836 25 0 2354 4189 322671969 322670134 0.000000e+00 3253.0
92 TraesCS5A01G315100 chr4B 100.000 123 0 0 2231 2353 172477751 172477629 2.790000e-55 228.0
93 TraesCS5A01G315100 chr4B 99.206 126 1 0 2228 2353 389415995 389415870 2.790000e-55 228.0
94 TraesCS5A01G315100 chr4B 92.913 127 7 2 5936 6061 141455915 141456040 6.130000e-42 183.0
95 TraesCS5A01G315100 chr4B 94.167 120 6 1 5945 6064 357908329 357908211 2.210000e-41 182.0
96 TraesCS5A01G315100 chr4B 95.455 88 4 0 8032 8119 399102436 399102349 3.740000e-29 141.0
97 TraesCS5A01G315100 chr4B 95.402 87 4 0 8032 8118 450316568 450316482 1.350000e-28 139.0
98 TraesCS5A01G315100 chr4B 93.548 93 5 1 8030 8121 597668069 597668161 4.840000e-28 137.0
99 TraesCS5A01G315100 chr4A 98.481 1843 26 2 2351 4193 713740338 713742178 0.000000e+00 3247.0
100 TraesCS5A01G315100 chr4A 98.425 127 2 0 2227 2353 314684484 314684610 3.610000e-54 224.0
101 TraesCS5A01G315100 chr4A 93.548 124 7 1 5944 6066 702148910 702148787 6.130000e-42 183.0
102 TraesCS5A01G315100 chr5B 95.751 1977 56 7 6069 8034 498268584 498270543 0.000000e+00 3160.0
103 TraesCS5A01G315100 chr5B 94.380 1299 57 12 6035 7321 498711039 498712333 0.000000e+00 1980.0
104 TraesCS5A01G315100 chr5B 94.900 1255 60 3 6069 7321 498788030 498789282 0.000000e+00 1960.0
105 TraesCS5A01G315100 chr5B 93.837 1298 64 10 6035 7321 498791353 498792645 0.000000e+00 1940.0
106 TraesCS5A01G315100 chr5B 94.511 1257 56 6 6069 7321 498532873 498534120 0.000000e+00 1927.0
107 TraesCS5A01G315100 chr5B 93.882 1275 64 9 6035 7299 498784625 498785895 0.000000e+00 1910.0
108 TraesCS5A01G315100 chr5B 96.882 930 28 1 4182 5111 498266853 498267781 0.000000e+00 1555.0
109 TraesCS5A01G315100 chr5B 98.313 889 12 2 5061 5946 498267678 498268566 0.000000e+00 1555.0
110 TraesCS5A01G315100 chr5B 94.944 890 39 5 5061 5946 498531968 498532855 0.000000e+00 1389.0
111 TraesCS5A01G315100 chr5B 93.617 893 52 4 5061 5949 498710021 498710912 0.000000e+00 1328.0
112 TraesCS5A01G315100 chr5B 96.000 700 25 1 8115 8814 498270541 498271237 0.000000e+00 1134.0
113 TraesCS5A01G315100 chr5B 91.576 831 41 6 5145 5971 498783710 498784515 0.000000e+00 1120.0
114 TraesCS5A01G315100 chr5B 89.468 902 61 18 8115 9014 498280125 498280994 0.000000e+00 1109.0
115 TraesCS5A01G315100 chr5B 94.935 691 32 3 1168 1858 498265821 498266508 0.000000e+00 1079.0
116 TraesCS5A01G315100 chr5B 93.538 619 16 4 555 1159 498265134 498265742 0.000000e+00 900.0
117 TraesCS5A01G315100 chr5B 85.593 708 73 15 4182 4866 498526940 498527641 0.000000e+00 715.0
118 TraesCS5A01G315100 chr5B 85.513 711 69 20 4182 4866 498530640 498531342 0.000000e+00 712.0
119 TraesCS5A01G315100 chr5B 78.355 1289 141 64 1004 2235 498781305 498782512 0.000000e+00 708.0
120 TraesCS5A01G315100 chr5B 77.795 1297 144 66 1004 2235 498707770 498708987 0.000000e+00 667.0
121 TraesCS5A01G315100 chr5B 91.002 489 37 5 4629 5111 498709636 498710123 0.000000e+00 652.0
122 TraesCS5A01G315100 chr5B 90.593 489 38 6 4629 5111 498783162 498783648 8.420000e-180 641.0
123 TraesCS5A01G315100 chr5B 89.718 496 41 8 4624 5111 498531577 498532070 8.480000e-175 625.0
124 TraesCS5A01G315100 chr5B 87.755 539 59 7 34 569 498264583 498265117 3.050000e-174 623.0
125 TraesCS5A01G315100 chr5B 90.336 476 19 10 1785 2235 498266401 498266874 5.140000e-167 599.0
126 TraesCS5A01G315100 chr5B 92.347 392 24 3 9272 9662 498794853 498795239 4.060000e-153 553.0
127 TraesCS5A01G315100 chr5B 90.864 405 35 1 4182 4586 498708966 498709368 8.780000e-150 542.0
128 TraesCS5A01G315100 chr5B 90.617 405 36 1 4182 4586 498782491 498782893 4.090000e-148 536.0
129 TraesCS5A01G315100 chr5B 91.731 387 18 5 7323 7696 498713760 498714145 8.840000e-145 525.0
130 TraesCS5A01G315100 chr5B 80.713 757 62 42 1516 2235 498526252 498526961 6.890000e-141 512.0
131 TraesCS5A01G315100 chr5B 93.968 315 12 3 9307 9620 498271764 498272072 4.200000e-128 470.0
132 TraesCS5A01G315100 chr5B 96.981 265 8 0 9676 9940 498272168 498272432 7.080000e-121 446.0
133 TraesCS5A01G315100 chr5B 92.359 301 17 3 9272 9571 498280992 498281287 3.320000e-114 424.0
134 TraesCS5A01G315100 chr5B 97.143 245 7 0 8959 9203 498271238 498271482 2.000000e-111 414.0
135 TraesCS5A01G315100 chr5B 87.714 350 37 1 760 1109 498707478 498707821 4.320000e-108 403.0
136 TraesCS5A01G315100 chr5B 84.634 423 44 7 701 1109 498525380 498525795 1.560000e-107 401.0
137 TraesCS5A01G315100 chr5B 93.902 246 12 3 9419 9662 498281280 498281524 1.580000e-97 368.0
138 TraesCS5A01G315100 chr5B 95.392 217 10 0 7323 7539 498794411 498794627 7.390000e-91 346.0
139 TraesCS5A01G315100 chr5B 95.349 215 10 0 7323 7537 498787346 498787560 9.560000e-90 342.0
140 TraesCS5A01G315100 chr5B 93.778 225 14 0 7323 7547 498277845 498278069 1.240000e-88 339.0
141 TraesCS5A01G315100 chr5B 78.731 536 76 25 9426 9940 498526512 498527030 3.460000e-84 324.0
142 TraesCS5A01G315100 chr5B 83.702 362 35 12 5618 5971 498802840 498803185 4.480000e-83 320.0
143 TraesCS5A01G315100 chr5B 80.535 411 56 11 4184 4592 498272351 498272739 2.720000e-75 294.0
144 TraesCS5A01G315100 chr5B 78.468 483 70 30 5486 5956 498540740 498541200 1.630000e-72 285.0
145 TraesCS5A01G315100 chr5B 92.737 179 11 1 7856 8034 498279951 498280127 3.560000e-64 257.0
146 TraesCS5A01G315100 chr5B 92.308 182 12 2 8834 9014 498794675 498794855 3.560000e-64 257.0
147 TraesCS5A01G315100 chr5B 92.697 178 12 1 8834 9010 498787610 498787787 1.280000e-63 255.0
148 TraesCS5A01G315100 chr5B 91.758 182 10 2 8834 9010 498790997 498791178 2.140000e-61 248.0
149 TraesCS5A01G315100 chr5B 79.755 326 52 8 6034 6352 498541247 498541565 3.610000e-54 224.0
150 TraesCS5A01G315100 chr5B 92.800 125 9 0 5937 6061 402870172 402870296 2.210000e-41 182.0
151 TraesCS5A01G315100 chr5B 95.402 87 4 0 8031 8117 429030606 429030692 1.350000e-28 139.0
152 TraesCS5A01G315100 chr5B 98.630 73 1 0 9707 9779 498795237 498795309 8.100000e-26 130.0
153 TraesCS5A01G315100 chr5B 97.297 74 2 0 9707 9780 498714160 498714233 1.050000e-24 126.0
154 TraesCS5A01G315100 chr5B 95.946 74 3 0 9707 9780 498281522 498281595 4.880000e-23 121.0
155 TraesCS5A01G315100 chr5B 93.590 78 1 1 9707 9780 498535681 498535758 8.160000e-21 113.0
156 TraesCS5A01G315100 chr5B 94.595 37 1 1 1754 1790 498526517 498526552 1.000000e-03 56.5
157 TraesCS5A01G315100 chr3D 82.274 519 81 8 31 538 562514087 562514605 1.190000e-118 438.0
158 TraesCS5A01G315100 chr3D 92.683 123 9 0 5939 6061 614197340 614197462 2.850000e-40 178.0
159 TraesCS5A01G315100 chr3D 90.299 134 12 1 5938 6071 474540387 474540255 3.690000e-39 174.0
160 TraesCS5A01G315100 chr3D 95.402 87 3 1 8033 8118 47483341 47483255 4.840000e-28 137.0
161 TraesCS5A01G315100 chr2B 81.818 528 84 7 35 551 730178755 730179281 5.510000e-117 433.0
162 TraesCS5A01G315100 chr2B 80.638 439 70 10 34 459 126170616 126170180 9.630000e-85 326.0
163 TraesCS5A01G315100 chr2B 94.488 127 6 1 5942 6068 723434352 723434227 2.830000e-45 195.0
164 TraesCS5A01G315100 chr6D 80.996 542 88 13 25 554 20134564 20135102 5.550000e-112 416.0
165 TraesCS5A01G315100 chr6D 93.333 120 8 0 5945 6064 319246371 319246252 2.850000e-40 178.0
166 TraesCS5A01G315100 chr6D 92.063 126 10 0 5945 6070 452132474 452132599 2.850000e-40 178.0
167 TraesCS5A01G315100 chr6D 92.000 125 9 1 5942 6066 39092681 39092804 3.690000e-39 174.0
168 TraesCS5A01G315100 chr6D 92.562 121 9 0 5945 6065 366701106 366701226 3.690000e-39 174.0
169 TraesCS5A01G315100 chr6D 94.318 88 5 0 8030 8117 367341735 367341648 1.740000e-27 135.0
170 TraesCS5A01G315100 chr6D 92.553 94 5 2 8025 8117 450890502 450890410 6.260000e-27 134.0
171 TraesCS5A01G315100 chr6D 94.253 87 4 1 8033 8119 2690939 2690854 2.250000e-26 132.0
172 TraesCS5A01G315100 chr6D 92.045 88 7 0 8031 8118 102135966 102135879 3.770000e-24 124.0
173 TraesCS5A01G315100 chr1D 79.810 525 90 12 34 546 192363052 192362532 1.580000e-97 368.0
174 TraesCS5A01G315100 chr1D 90.683 161 11 4 2194 2353 406406093 406406250 2.810000e-50 211.0
175 TraesCS5A01G315100 chr6A 78.995 557 95 15 12 552 540151206 540151756 2.640000e-95 361.0
176 TraesCS5A01G315100 chr6A 95.556 90 4 0 8028 8117 101438367 101438278 2.890000e-30 145.0
177 TraesCS5A01G315100 chr6A 94.318 88 5 0 8030 8117 511530185 511530098 1.740000e-27 135.0
178 TraesCS5A01G315100 chr6A 91.489 94 8 0 8026 8119 500714577 500714670 8.100000e-26 130.0
179 TraesCS5A01G315100 chrUn 78.599 514 98 8 34 536 134258182 134258694 7.440000e-86 329.0
180 TraesCS5A01G315100 chrUn 94.872 117 6 0 5945 6061 87827393 87827509 6.130000e-42 183.0
181 TraesCS5A01G315100 chrUn 94.872 117 6 0 5945 6061 309972438 309972554 6.130000e-42 183.0
182 TraesCS5A01G315100 chrUn 92.623 122 9 0 5940 6061 21612679 21612558 1.030000e-39 176.0
183 TraesCS5A01G315100 chrUn 93.277 119 8 0 5943 6061 70385114 70385232 1.030000e-39 176.0
184 TraesCS5A01G315100 chrUn 92.623 122 9 0 5945 6066 100620763 100620884 1.030000e-39 176.0
185 TraesCS5A01G315100 chrUn 93.162 117 8 0 5944 6060 144823092 144823208 1.330000e-38 172.0
186 TraesCS5A01G315100 chrUn 91.736 121 10 0 5941 6061 42660287 42660407 1.720000e-37 169.0
187 TraesCS5A01G315100 chrUn 91.736 121 10 0 5941 6061 350286417 350286537 1.720000e-37 169.0
188 TraesCS5A01G315100 chrUn 92.308 117 9 0 5945 6061 272135903 272136019 6.180000e-37 167.0
189 TraesCS5A01G315100 chrUn 89.231 130 12 2 5941 6069 86292851 86292723 2.870000e-35 161.0
190 TraesCS5A01G315100 chrUn 95.402 87 4 0 8033 8119 135090718 135090804 1.350000e-28 139.0
191 TraesCS5A01G315100 chrUn 95.402 87 4 0 8033 8119 152687574 152687660 1.350000e-28 139.0
192 TraesCS5A01G315100 chrUn 92.135 89 7 0 8032 8120 17148598 17148686 1.050000e-24 126.0
193 TraesCS5A01G315100 chrUn 92.941 85 6 0 8033 8117 27127827 27127743 3.770000e-24 124.0
194 TraesCS5A01G315100 chrUn 92.941 85 6 0 8033 8117 241299383 241299467 3.770000e-24 124.0
195 TraesCS5A01G315100 chrUn 92.941 85 6 0 8033 8117 317309617 317309701 3.770000e-24 124.0
196 TraesCS5A01G315100 chrUn 91.111 90 8 0 8028 8117 94824141 94824230 1.360000e-23 122.0
197 TraesCS5A01G315100 chrUn 91.860 86 7 0 8032 8117 10358150 10358235 4.880000e-23 121.0
198 TraesCS5A01G315100 chrUn 91.860 86 7 0 8032 8117 287714771 287714856 4.880000e-23 121.0
199 TraesCS5A01G315100 chr7D 76.757 555 101 18 1 536 398722134 398721589 1.630000e-72 285.0
200 TraesCS5A01G315100 chr7D 94.167 120 7 0 5945 6064 45626691 45626810 6.130000e-42 183.0
201 TraesCS5A01G315100 chr7D 95.455 88 4 0 8032 8119 444474343 444474256 3.740000e-29 141.0
202 TraesCS5A01G315100 chr6B 98.425 127 2 0 2227 2353 559344507 559344633 3.610000e-54 224.0
203 TraesCS5A01G315100 chr6B 95.620 137 3 3 2219 2353 415122903 415122768 6.050000e-52 217.0
204 TraesCS5A01G315100 chr3B 96.296 135 4 1 2220 2353 670743639 670743505 4.670000e-53 220.0
205 TraesCS5A01G315100 chr3B 94.215 121 7 0 5945 6065 725714429 725714309 1.700000e-42 185.0
206 TraesCS5A01G315100 chr3B 94.915 118 6 0 5944 6061 798492206 798492089 1.700000e-42 185.0
207 TraesCS5A01G315100 chr3B 91.667 132 9 2 5936 6066 828461661 828461791 2.210000e-41 182.0
208 TraesCS5A01G315100 chr3B 93.548 93 6 0 8025 8117 804216666 804216574 1.350000e-28 139.0
209 TraesCS5A01G315100 chr7B 91.538 130 10 1 5941 6070 78550153 78550025 2.850000e-40 178.0
210 TraesCS5A01G315100 chr7B 95.556 90 4 0 8031 8120 702625496 702625407 2.890000e-30 145.0
211 TraesCS5A01G315100 chr4D 92.000 125 10 0 5945 6069 18207559 18207435 1.030000e-39 176.0
212 TraesCS5A01G315100 chr4D 90.299 134 12 1 5932 6064 10764582 10764449 3.690000e-39 174.0
213 TraesCS5A01G315100 chr4D 90.769 130 10 1 5932 6061 428946368 428946495 1.330000e-38 172.0
214 TraesCS5A01G315100 chr4D 94.505 91 4 1 8030 8119 449455704 449455614 1.350000e-28 139.0
215 TraesCS5A01G315100 chr4D 95.294 85 4 0 8033 8117 485409435 485409351 1.740000e-27 135.0
216 TraesCS5A01G315100 chr4D 93.333 90 6 0 8032 8121 24455800 24455889 6.260000e-27 134.0
217 TraesCS5A01G315100 chr4D 93.258 89 6 0 8033 8121 10971615 10971527 2.250000e-26 132.0
218 TraesCS5A01G315100 chr7A 94.505 91 5 0 8030 8120 129876936 129877026 3.740000e-29 141.0
219 TraesCS5A01G315100 chr2D 87.500 96 12 0 34 129 456325059 456324964 2.930000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G315100 chr5A 525704082 525714021 9939 False 18356.000000 18356 100.000000 1 9940 1 chr5A.!!$F3 9939
1 TraesCS5A01G315100 chr5A 525835734 525840661 4927 False 936.000000 1919 88.201600 689 7321 5 chr5A.!!$F6 6632
2 TraesCS5A01G315100 chr5A 525924751 525931397 6646 False 844.142857 1929 89.859714 1004 8491 7 chr5A.!!$F7 7487
3 TraesCS5A01G315100 chr5A 525737839 525751199 13360 False 760.000000 1917 89.734625 686 9662 8 chr5A.!!$F5 8976
4 TraesCS5A01G315100 chr5A 526284559 526286609 2050 False 710.250000 1151 92.674000 7323 9780 4 chr5A.!!$F8 2457
5 TraesCS5A01G315100 chr1B 69840621 69842445 1824 True 3265.000000 3265 98.959000 2354 4178 1 chr1B.!!$R2 1824
6 TraesCS5A01G315100 chr1B 655769504 655771336 1832 True 3258.000000 3258 98.745000 2354 4186 1 chr1B.!!$R5 1832
7 TraesCS5A01G315100 chr1A 136930838 136932665 1827 False 3260.000000 3260 98.851000 2351 4178 1 chr1A.!!$F1 1827
8 TraesCS5A01G315100 chr1A 517045162 517046991 1829 True 3258.000000 3258 98.798000 2354 4183 1 chr1A.!!$R2 1829
9 TraesCS5A01G315100 chr1A 285979891 285980435 544 False 385.000000 385 79.818000 14 551 1 chr1A.!!$F2 537
10 TraesCS5A01G315100 chr5D 565525372 565527198 1826 True 3258.000000 3258 98.851000 2354 4180 1 chr5D.!!$R3 1826
11 TraesCS5A01G315100 chr5D 413434932 413440485 5553 False 1227.142857 2948 92.105000 609 9718 7 chr5D.!!$F5 9109
12 TraesCS5A01G315100 chr5D 413447337 413449183 1846 False 882.333333 1267 90.305000 4184 9940 3 chr5D.!!$F6 5756
13 TraesCS5A01G315100 chr5D 413468233 413470271 2038 False 699.525000 1138 92.035000 7323 9770 4 chr5D.!!$F7 2447
14 TraesCS5A01G315100 chr5D 413597672 413605983 8311 False 686.333333 1757 90.091917 686 9659 12 chr5D.!!$F9 8973
15 TraesCS5A01G315100 chr5D 413567820 413576219 8399 False 662.285714 2043 90.836357 686 9780 14 chr5D.!!$F8 9094
16 TraesCS5A01G315100 chr3A 46612607 46614436 1829 False 3258.000000 3258 98.798000 2351 4180 1 chr3A.!!$F1 1829
17 TraesCS5A01G315100 chr3A 558879596 558880126 530 False 427.000000 427 81.579000 28 546 1 chr3A.!!$F2 518
18 TraesCS5A01G315100 chr2A 748455033 748456862 1829 False 3258.000000 3258 98.798000 2351 4180 1 chr2A.!!$F1 1829
19 TraesCS5A01G315100 chr4B 322670134 322671969 1835 True 3253.000000 3253 98.638000 2354 4189 1 chr4B.!!$R2 1835
20 TraesCS5A01G315100 chr4A 713740338 713742178 1840 False 3247.000000 3247 98.481000 2351 4193 1 chr4A.!!$F2 1842
21 TraesCS5A01G315100 chr5B 498264583 498272739 8156 False 1019.083333 3160 93.511417 34 9940 12 chr5B.!!$F4 9906
22 TraesCS5A01G315100 chr5B 498781305 498795309 14004 False 781.857143 1960 92.302929 1004 9779 14 chr5B.!!$F9 8775
23 TraesCS5A01G315100 chr5B 498707478 498714233 6755 False 777.875000 1980 90.550000 760 9780 8 chr5B.!!$F8 9020
24 TraesCS5A01G315100 chr5B 498525380 498535758 10378 False 677.450000 1927 88.254200 701 9940 10 chr5B.!!$F6 9239
25 TraesCS5A01G315100 chr5B 498277845 498281595 3750 False 436.333333 1109 93.031667 7323 9780 6 chr5B.!!$F5 2457
26 TraesCS5A01G315100 chr5B 498540740 498541565 825 False 254.500000 285 79.111500 5486 6352 2 chr5B.!!$F7 866
27 TraesCS5A01G315100 chr3D 562514087 562514605 518 False 438.000000 438 82.274000 31 538 1 chr3D.!!$F1 507
28 TraesCS5A01G315100 chr2B 730178755 730179281 526 False 433.000000 433 81.818000 35 551 1 chr2B.!!$F1 516
29 TraesCS5A01G315100 chr6D 20134564 20135102 538 False 416.000000 416 80.996000 25 554 1 chr6D.!!$F1 529
30 TraesCS5A01G315100 chr1D 192362532 192363052 520 True 368.000000 368 79.810000 34 546 1 chr1D.!!$R1 512
31 TraesCS5A01G315100 chr6A 540151206 540151756 550 False 361.000000 361 78.995000 12 552 1 chr6A.!!$F2 540
32 TraesCS5A01G315100 chrUn 134258182 134258694 512 False 329.000000 329 78.599000 34 536 1 chrUn.!!$F8 502
33 TraesCS5A01G315100 chr7D 398721589 398722134 545 True 285.000000 285 76.757000 1 536 1 chr7D.!!$R1 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
344 362 0.179029 CCTATGGGGCCTTAACACGG 60.179 60.0 0.84 0.0 0.00 4.94 F
2268 2784 0.179081 GTCTCAACATAGCCGGTCCC 60.179 60.0 1.90 0.0 0.00 4.46 F
2306 2822 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.0 0.00 0.0 0.00 4.52 F
4101 4731 0.111061 TGTGCCAGAGCCATGAGTTT 59.889 50.0 0.00 0.0 38.69 2.66 F
5072 9963 0.179468 TACCTTATCCGCTTGGGTGC 59.821 55.0 0.00 0.0 37.00 5.01 F
5084 9975 0.249676 TTGGGTGCTATCCGCGTTTA 59.750 50.0 4.92 0.0 43.27 2.01 F
5965 10969 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.0 5.23 0.0 44.66 1.89 F
6640 14668 0.675633 TGGCTCTTCTTTTTGCAGGC 59.324 50.0 0.00 0.0 0.00 4.85 F
8429 29726 0.307760 GAACCTCAACAACGCCACAG 59.692 55.0 0.00 0.0 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2287 2803 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.00 0.0 0.00 4.34 R
3940 4570 0.108138 ATTCTCCGCACGCTTTAGCT 60.108 50.000 0.00 0.0 39.32 3.32 R
4180 4810 2.030274 GTCAAAATGCTACCACCACCAC 60.030 50.000 0.00 0.0 0.00 4.16 R
5581 10558 0.175073 CCCGTCTAGTACAGTTGGGC 59.825 60.000 0.00 0.0 34.47 5.36 R
6588 14616 0.809636 GCCCACAACCAAACAAGTGC 60.810 55.000 0.00 0.0 0.00 4.40 R
6702 14731 2.375174 AGCCATCAGTTTACCTTGGACA 59.625 45.455 0.00 0.0 0.00 4.02 R
7431 24027 0.038744 AGGCCATTCCTCACAACCTG 59.961 55.000 5.01 0.0 43.20 4.00 R
8445 29742 0.107459 GTCCTCTGGCTCCAATCCAC 60.107 60.000 0.00 0.0 0.00 4.02 R
9231 30530 0.033503 GGGGGTGGAGGTAATGGTTG 60.034 60.000 0.00 0.0 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
201 218 2.433970 TGTGAAGGTGTGTCTGTGATGA 59.566 45.455 0.00 0.00 0.00 2.92
290 307 4.931027 ATCCTTCCGATCTAGGCTACTA 57.069 45.455 0.00 0.00 0.00 1.82
344 362 0.179029 CCTATGGGGCCTTAACACGG 60.179 60.000 0.84 0.00 0.00 4.94
443 462 3.575630 CTCGCTTTAGTGCTTGTAGTCA 58.424 45.455 0.00 0.00 0.00 3.41
512 532 9.781834 TTTATGTTCGTTGTATTTCCATGATTC 57.218 29.630 0.00 0.00 0.00 2.52
594 644 6.205658 GGAAACAAACTTGTAGAGCAGAGAAT 59.794 38.462 0.00 0.00 41.31 2.40
674 724 1.070786 GCCAGAGAACACGACCCAA 59.929 57.895 0.00 0.00 0.00 4.12
675 725 1.228657 GCCAGAGAACACGACCCAAC 61.229 60.000 0.00 0.00 0.00 3.77
676 726 0.602905 CCAGAGAACACGACCCAACC 60.603 60.000 0.00 0.00 0.00 3.77
677 727 0.602905 CAGAGAACACGACCCAACCC 60.603 60.000 0.00 0.00 0.00 4.11
678 728 1.052124 AGAGAACACGACCCAACCCA 61.052 55.000 0.00 0.00 0.00 4.51
679 729 0.602905 GAGAACACGACCCAACCCAG 60.603 60.000 0.00 0.00 0.00 4.45
680 730 1.147600 GAACACGACCCAACCCAGT 59.852 57.895 0.00 0.00 0.00 4.00
791 858 2.858158 CCGTTTCCGCGTTTCCTC 59.142 61.111 4.92 0.00 0.00 3.71
1265 1522 4.530857 CTCCCCCGTGACGCATCC 62.531 72.222 0.00 0.00 0.00 3.51
1373 1682 1.265454 CCTCTACCTTTCCCTGCCGT 61.265 60.000 0.00 0.00 0.00 5.68
1447 1756 4.820744 CCGGCCCTCAACCCATGG 62.821 72.222 4.14 4.14 0.00 3.66
1752 2140 7.778470 AAGAGAAATGAAACCGTATCAGATC 57.222 36.000 0.00 0.00 0.00 2.75
1770 2158 6.182627 TCAGATCTGTTGATGCTTATGGTTT 58.817 36.000 21.92 0.00 32.19 3.27
1811 2199 9.638239 GATTTTGTTGATGCTTATGGTTTTAGA 57.362 29.630 0.00 0.00 0.00 2.10
1946 2462 9.151471 GGCTTTCGATTATGTCTATATAAGCAA 57.849 33.333 10.66 0.00 36.80 3.91
1975 2491 7.461749 AGACATATCTTTGAGTTTTTCTGGGA 58.538 34.615 0.00 0.00 0.00 4.37
1976 2492 7.944554 AGACATATCTTTGAGTTTTTCTGGGAA 59.055 33.333 0.00 0.00 0.00 3.97
1977 2493 8.115490 ACATATCTTTGAGTTTTTCTGGGAAG 57.885 34.615 0.00 0.00 0.00 3.46
1978 2494 4.918810 TCTTTGAGTTTTTCTGGGAAGC 57.081 40.909 0.00 0.00 0.00 3.86
1979 2495 4.536765 TCTTTGAGTTTTTCTGGGAAGCT 58.463 39.130 0.00 0.00 0.00 3.74
1980 2496 4.956075 TCTTTGAGTTTTTCTGGGAAGCTT 59.044 37.500 0.00 0.00 0.00 3.74
1981 2497 6.126409 TCTTTGAGTTTTTCTGGGAAGCTTA 58.874 36.000 0.00 0.00 0.00 3.09
1982 2498 6.605594 TCTTTGAGTTTTTCTGGGAAGCTTAA 59.394 34.615 0.00 0.00 0.00 1.85
1983 2499 6.976934 TTGAGTTTTTCTGGGAAGCTTAAT 57.023 33.333 0.00 0.00 0.00 1.40
1985 2501 7.687941 TGAGTTTTTCTGGGAAGCTTAATAG 57.312 36.000 0.00 0.00 0.00 1.73
1986 2502 7.231467 TGAGTTTTTCTGGGAAGCTTAATAGT 58.769 34.615 0.00 0.00 0.00 2.12
1987 2503 7.390718 TGAGTTTTTCTGGGAAGCTTAATAGTC 59.609 37.037 0.00 0.00 0.00 2.59
1988 2504 7.231467 AGTTTTTCTGGGAAGCTTAATAGTCA 58.769 34.615 0.00 0.00 0.00 3.41
1989 2505 7.391833 AGTTTTTCTGGGAAGCTTAATAGTCAG 59.608 37.037 0.00 1.69 0.00 3.51
1990 2506 4.408182 TCTGGGAAGCTTAATAGTCAGC 57.592 45.455 0.00 0.00 36.16 4.26
1993 2509 3.519510 TGGGAAGCTTAATAGTCAGCACT 59.480 43.478 0.00 0.00 38.61 4.40
1994 2510 3.873952 GGGAAGCTTAATAGTCAGCACTG 59.126 47.826 0.00 0.00 38.61 3.66
1997 2513 3.866651 AGCTTAATAGTCAGCACTGTGG 58.133 45.455 10.21 0.00 38.61 4.17
1998 2514 3.261897 AGCTTAATAGTCAGCACTGTGGT 59.738 43.478 6.68 6.68 38.61 4.16
1999 2515 4.003648 GCTTAATAGTCAGCACTGTGGTT 58.996 43.478 10.19 0.00 35.95 3.67
2000 2516 4.142816 GCTTAATAGTCAGCACTGTGGTTG 60.143 45.833 10.19 6.44 35.95 3.77
2002 2518 3.492102 ATAGTCAGCACTGTGGTTGTT 57.508 42.857 10.19 1.28 33.62 2.83
2004 2520 2.017049 AGTCAGCACTGTGGTTGTTTC 58.983 47.619 10.19 0.00 0.00 2.78
2011 2527 4.516698 AGCACTGTGGTTGTTTCTCTTATG 59.483 41.667 6.68 0.00 0.00 1.90
2012 2528 4.320494 GCACTGTGGTTGTTTCTCTTATGG 60.320 45.833 10.21 0.00 0.00 2.74
2014 2530 5.299279 CACTGTGGTTGTTTCTCTTATGGTT 59.701 40.000 0.00 0.00 0.00 3.67
2015 2531 5.531287 ACTGTGGTTGTTTCTCTTATGGTTC 59.469 40.000 0.00 0.00 0.00 3.62
2016 2532 5.441500 TGTGGTTGTTTCTCTTATGGTTCA 58.558 37.500 0.00 0.00 0.00 3.18
2017 2533 5.888724 TGTGGTTGTTTCTCTTATGGTTCAA 59.111 36.000 0.00 0.00 0.00 2.69
2018 2534 6.183360 TGTGGTTGTTTCTCTTATGGTTCAAC 60.183 38.462 0.00 0.00 34.95 3.18
2019 2535 5.888724 TGGTTGTTTCTCTTATGGTTCAACA 59.111 36.000 0.00 0.00 36.62 3.33
2021 2537 6.863126 GGTTGTTTCTCTTATGGTTCAACATG 59.137 38.462 0.00 0.00 36.62 3.21
2022 2538 6.573664 TGTTTCTCTTATGGTTCAACATGG 57.426 37.500 0.00 0.00 32.39 3.66
2027 2543 6.484288 TCTCTTATGGTTCAACATGGACATT 58.516 36.000 0.00 0.00 32.39 2.71
2028 2544 6.599244 TCTCTTATGGTTCAACATGGACATTC 59.401 38.462 0.00 0.00 32.39 2.67
2029 2545 5.353956 TCTTATGGTTCAACATGGACATTCG 59.646 40.000 0.00 0.00 32.39 3.34
2030 2546 3.133141 TGGTTCAACATGGACATTCGA 57.867 42.857 0.00 0.00 0.00 3.71
2034 2550 4.858692 GGTTCAACATGGACATTCGAAATG 59.141 41.667 0.00 3.39 0.00 2.32
2035 2551 5.460646 GTTCAACATGGACATTCGAAATGT 58.539 37.500 0.00 7.43 32.99 2.71
2036 2552 5.703978 TCAACATGGACATTCGAAATGTT 57.296 34.783 15.90 15.90 41.01 2.71
2038 2554 5.221880 CAACATGGACATTCGAAATGTTGT 58.778 37.500 28.42 18.67 46.62 3.32
2041 2557 5.009510 ACATGGACATTCGAAATGTTGTTGA 59.990 36.000 0.00 0.00 31.52 3.18
2044 2560 5.919707 TGGACATTCGAAATGTTGTTGATTG 59.080 36.000 0.00 0.00 31.52 2.67
2046 2562 6.088085 GGACATTCGAAATGTTGTTGATTGTC 59.912 38.462 0.00 6.75 38.36 3.18
2049 2565 8.296000 ACATTCGAAATGTTGTTGATTGTCATA 58.704 29.630 0.00 0.00 0.00 2.15
2050 2566 9.292846 CATTCGAAATGTTGTTGATTGTCATAT 57.707 29.630 0.00 0.00 0.00 1.78
2051 2567 8.894409 TTCGAAATGTTGTTGATTGTCATATC 57.106 30.769 0.00 0.00 0.00 1.63
2052 2568 7.179410 TCGAAATGTTGTTGATTGTCATATCG 58.821 34.615 0.00 0.00 0.00 2.92
2053 2569 6.960992 CGAAATGTTGTTGATTGTCATATCGT 59.039 34.615 0.00 0.00 0.00 3.73
2054 2570 8.113675 CGAAATGTTGTTGATTGTCATATCGTA 58.886 33.333 0.00 0.00 0.00 3.43
2055 2571 9.210426 GAAATGTTGTTGATTGTCATATCGTAC 57.790 33.333 0.00 0.00 0.00 3.67
2056 2572 6.656314 TGTTGTTGATTGTCATATCGTACC 57.344 37.500 0.00 0.00 0.00 3.34
2060 2576 6.403049 TGTTGATTGTCATATCGTACCTGTT 58.597 36.000 0.00 0.00 0.00 3.16
2061 2577 6.876789 TGTTGATTGTCATATCGTACCTGTTT 59.123 34.615 0.00 0.00 0.00 2.83
2062 2578 7.389330 TGTTGATTGTCATATCGTACCTGTTTT 59.611 33.333 0.00 0.00 0.00 2.43
2065 2581 9.438228 TGATTGTCATATCGTACCTGTTTTTAA 57.562 29.630 0.00 0.00 0.00 1.52
2066 2582 9.916397 GATTGTCATATCGTACCTGTTTTTAAG 57.084 33.333 0.00 0.00 0.00 1.85
2067 2583 7.298507 TGTCATATCGTACCTGTTTTTAAGC 57.701 36.000 0.00 0.00 0.00 3.09
2070 2586 8.062448 GTCATATCGTACCTGTTTTTAAGCATC 58.938 37.037 0.00 0.00 0.00 3.91
2072 2588 5.600908 TCGTACCTGTTTTTAAGCATCAC 57.399 39.130 0.00 0.00 0.00 3.06
2073 2589 5.302360 TCGTACCTGTTTTTAAGCATCACT 58.698 37.500 0.00 0.00 0.00 3.41
2074 2590 5.178623 TCGTACCTGTTTTTAAGCATCACTG 59.821 40.000 0.00 0.00 0.00 3.66
2088 2604 3.994789 CATCACTGCATCACGTTTGTAG 58.005 45.455 10.58 10.58 33.59 2.74
2089 2605 3.378911 TCACTGCATCACGTTTGTAGA 57.621 42.857 16.86 0.00 32.02 2.59
2090 2606 3.057019 TCACTGCATCACGTTTGTAGAC 58.943 45.455 16.86 0.00 32.02 2.59
2093 2609 2.412870 TGCATCACGTTTGTAGACTGG 58.587 47.619 0.00 0.00 0.00 4.00
2096 2612 3.254060 CATCACGTTTGTAGACTGGAGG 58.746 50.000 0.00 0.00 0.00 4.30
2099 2615 3.133362 TCACGTTTGTAGACTGGAGGTTT 59.867 43.478 0.00 0.00 0.00 3.27
2100 2616 3.247648 CACGTTTGTAGACTGGAGGTTTG 59.752 47.826 0.00 0.00 0.00 2.93
2101 2617 3.133362 ACGTTTGTAGACTGGAGGTTTGA 59.867 43.478 0.00 0.00 0.00 2.69
2103 2619 4.755123 CGTTTGTAGACTGGAGGTTTGAAT 59.245 41.667 0.00 0.00 0.00 2.57
2104 2620 5.238650 CGTTTGTAGACTGGAGGTTTGAATT 59.761 40.000 0.00 0.00 0.00 2.17
2109 2625 7.284074 TGTAGACTGGAGGTTTGAATTTGTTA 58.716 34.615 0.00 0.00 0.00 2.41
2110 2626 7.776030 TGTAGACTGGAGGTTTGAATTTGTTAA 59.224 33.333 0.00 0.00 0.00 2.01
2111 2627 7.839680 AGACTGGAGGTTTGAATTTGTTAAT 57.160 32.000 0.00 0.00 0.00 1.40
2112 2628 7.661040 AGACTGGAGGTTTGAATTTGTTAATG 58.339 34.615 0.00 0.00 0.00 1.90
2113 2629 7.505585 AGACTGGAGGTTTGAATTTGTTAATGA 59.494 33.333 0.00 0.00 0.00 2.57
2114 2630 7.433680 ACTGGAGGTTTGAATTTGTTAATGAC 58.566 34.615 0.00 0.00 0.00 3.06
2115 2631 7.069331 ACTGGAGGTTTGAATTTGTTAATGACA 59.931 33.333 0.00 0.00 36.19 3.58
2117 2633 6.366061 GGAGGTTTGAATTTGTTAATGACAGC 59.634 38.462 0.00 0.00 39.94 4.40
2119 2635 7.500141 AGGTTTGAATTTGTTAATGACAGCTT 58.500 30.769 0.00 0.00 39.94 3.74
2125 2641 9.979578 TGAATTTGTTAATGACAGCTTATTGTT 57.020 25.926 0.00 0.00 39.94 2.83
2128 2644 8.810652 TTTGTTAATGACAGCTTATTGTTTCC 57.189 30.769 0.00 0.00 39.94 3.13
2130 2646 8.177119 TGTTAATGACAGCTTATTGTTTCCTT 57.823 30.769 0.00 0.00 33.40 3.36
2131 2647 9.290988 TGTTAATGACAGCTTATTGTTTCCTTA 57.709 29.630 0.00 0.00 33.40 2.69
2133 2649 5.880054 TGACAGCTTATTGTTTCCTTAGC 57.120 39.130 0.00 0.00 0.00 3.09
2135 2651 4.923415 ACAGCTTATTGTTTCCTTAGCCT 58.077 39.130 0.00 0.00 0.00 4.58
2136 2652 6.062258 ACAGCTTATTGTTTCCTTAGCCTA 57.938 37.500 0.00 0.00 0.00 3.93
2138 2654 6.599638 ACAGCTTATTGTTTCCTTAGCCTAAG 59.400 38.462 4.42 4.42 35.56 2.18
2139 2655 6.599638 CAGCTTATTGTTTCCTTAGCCTAAGT 59.400 38.462 10.47 0.00 33.96 2.24
2141 2657 7.670140 AGCTTATTGTTTCCTTAGCCTAAGTTT 59.330 33.333 10.47 0.00 33.96 2.66
2143 2659 9.841880 CTTATTGTTTCCTTAGCCTAAGTTTTC 57.158 33.333 10.47 0.22 33.96 2.29
2144 2660 6.644248 TTGTTTCCTTAGCCTAAGTTTTCC 57.356 37.500 10.47 0.00 33.96 3.13
2145 2661 5.948842 TGTTTCCTTAGCCTAAGTTTTCCT 58.051 37.500 10.47 0.00 33.96 3.36
2146 2662 6.370453 TGTTTCCTTAGCCTAAGTTTTCCTT 58.630 36.000 10.47 0.00 37.17 3.36
2147 2663 6.837048 TGTTTCCTTAGCCTAAGTTTTCCTTT 59.163 34.615 10.47 0.00 34.46 3.11
2148 2664 7.343574 TGTTTCCTTAGCCTAAGTTTTCCTTTT 59.656 33.333 10.47 0.00 34.46 2.27
2149 2665 8.853126 GTTTCCTTAGCCTAAGTTTTCCTTTTA 58.147 33.333 10.47 0.00 34.46 1.52
2150 2666 8.999905 TTCCTTAGCCTAAGTTTTCCTTTTAA 57.000 30.769 10.47 0.00 34.46 1.52
2153 2669 9.856488 CCTTAGCCTAAGTTTTCCTTTTAAATC 57.144 33.333 10.47 0.00 34.46 2.17
2157 2673 8.297426 AGCCTAAGTTTTCCTTTTAAATCTTCG 58.703 33.333 0.00 0.00 32.99 3.79
2158 2674 8.294577 GCCTAAGTTTTCCTTTTAAATCTTCGA 58.705 33.333 0.00 0.00 32.99 3.71
2195 2711 9.756571 TCCTAAGATAGTTATAGGATGGAGTTC 57.243 37.037 0.00 0.00 40.13 3.01
2198 2714 8.429237 AAGATAGTTATAGGATGGAGTTCTGG 57.571 38.462 0.00 0.00 0.00 3.86
2199 2715 6.957020 AGATAGTTATAGGATGGAGTTCTGGG 59.043 42.308 0.00 0.00 0.00 4.45
2200 2716 5.157770 AGTTATAGGATGGAGTTCTGGGA 57.842 43.478 0.00 0.00 0.00 4.37
2201 2717 5.731924 AGTTATAGGATGGAGTTCTGGGAT 58.268 41.667 0.00 0.00 0.00 3.85
2203 2719 6.621514 AGTTATAGGATGGAGTTCTGGGATTT 59.378 38.462 0.00 0.00 0.00 2.17
2204 2720 7.129504 AGTTATAGGATGGAGTTCTGGGATTTT 59.870 37.037 0.00 0.00 0.00 1.82
2205 2721 4.682021 AGGATGGAGTTCTGGGATTTTT 57.318 40.909 0.00 0.00 0.00 1.94
2226 2742 2.543037 TCTCTATGGTGGTGGTAGCA 57.457 50.000 0.00 0.00 0.00 3.49
2227 2743 3.046283 TCTCTATGGTGGTGGTAGCAT 57.954 47.619 0.00 0.00 41.29 3.79
2228 2744 3.384168 TCTCTATGGTGGTGGTAGCATT 58.616 45.455 0.00 0.00 39.33 3.56
2229 2745 3.780294 TCTCTATGGTGGTGGTAGCATTT 59.220 43.478 0.00 0.00 39.33 2.32
2231 2747 4.269183 TCTATGGTGGTGGTAGCATTTTG 58.731 43.478 0.00 0.00 39.33 2.44
2232 2748 2.666272 TGGTGGTGGTAGCATTTTGA 57.334 45.000 0.00 0.00 0.00 2.69
2233 2749 2.235016 TGGTGGTGGTAGCATTTTGAC 58.765 47.619 0.00 0.00 0.00 3.18
2234 2750 2.235016 GGTGGTGGTAGCATTTTGACA 58.765 47.619 0.00 0.00 0.00 3.58
2235 2751 2.625790 GGTGGTGGTAGCATTTTGACAA 59.374 45.455 0.00 0.00 0.00 3.18
2236 2752 3.552068 GGTGGTGGTAGCATTTTGACAAC 60.552 47.826 0.00 0.00 0.00 3.32
2237 2753 3.317993 GTGGTGGTAGCATTTTGACAACT 59.682 43.478 0.00 0.00 0.00 3.16
2238 2754 3.568007 TGGTGGTAGCATTTTGACAACTC 59.432 43.478 0.00 0.00 0.00 3.01
2239 2755 3.057526 GGTGGTAGCATTTTGACAACTCC 60.058 47.826 0.00 0.00 0.00 3.85
2240 2756 2.811431 TGGTAGCATTTTGACAACTCCG 59.189 45.455 0.00 0.00 0.00 4.63
2241 2757 2.414161 GGTAGCATTTTGACAACTCCGC 60.414 50.000 0.00 0.00 0.00 5.54
2242 2758 0.598065 AGCATTTTGACAACTCCGCC 59.402 50.000 0.00 0.00 0.00 6.13
2244 2760 1.810151 GCATTTTGACAACTCCGCCTA 59.190 47.619 0.00 0.00 0.00 3.93
2246 2762 3.731867 GCATTTTGACAACTCCGCCTATG 60.732 47.826 0.00 0.00 0.00 2.23
2247 2763 2.851263 TTTGACAACTCCGCCTATGT 57.149 45.000 0.00 0.00 0.00 2.29
2248 2764 2.851263 TTGACAACTCCGCCTATGTT 57.149 45.000 0.00 0.00 0.00 2.71
2249 2765 2.093306 TGACAACTCCGCCTATGTTG 57.907 50.000 0.00 0.00 44.44 3.33
2252 2768 2.386661 CAACTCCGCCTATGTTGTCT 57.613 50.000 0.00 0.00 37.05 3.41
2253 2769 2.271800 CAACTCCGCCTATGTTGTCTC 58.728 52.381 0.00 0.00 37.05 3.36
2256 2772 2.271800 CTCCGCCTATGTTGTCTCAAC 58.728 52.381 5.78 5.78 0.00 3.18
2257 2773 1.621317 TCCGCCTATGTTGTCTCAACA 59.379 47.619 15.83 15.83 34.31 3.33
2258 2774 2.236146 TCCGCCTATGTTGTCTCAACAT 59.764 45.455 24.50 24.50 42.82 2.71
2259 2775 3.449377 TCCGCCTATGTTGTCTCAACATA 59.551 43.478 24.21 24.21 40.87 2.29
2264 2780 2.093306 TGTTGTCTCAACATAGCCGG 57.907 50.000 10.63 0.00 34.73 6.13
2266 2782 2.000447 GTTGTCTCAACATAGCCGGTC 59.000 52.381 1.90 0.00 34.73 4.79
2267 2783 0.535335 TGTCTCAACATAGCCGGTCC 59.465 55.000 1.90 0.00 0.00 4.46
2268 2784 0.179081 GTCTCAACATAGCCGGTCCC 60.179 60.000 1.90 0.00 0.00 4.46
2269 2785 0.616395 TCTCAACATAGCCGGTCCCA 60.616 55.000 1.90 0.00 0.00 4.37
2271 2787 0.251916 TCAACATAGCCGGTCCCAAG 59.748 55.000 1.90 0.00 0.00 3.61
2272 2788 1.077716 AACATAGCCGGTCCCAAGC 60.078 57.895 1.90 0.00 0.00 4.01
2273 2789 2.203209 CATAGCCGGTCCCAAGCC 60.203 66.667 1.90 0.00 0.00 4.35
2274 2790 3.489513 ATAGCCGGTCCCAAGCCC 61.490 66.667 1.90 0.00 0.00 5.19
2283 2799 2.044352 CCCAAGCCCGGGTAAAGG 60.044 66.667 24.63 18.41 41.83 3.11
2284 2800 2.608550 CCCAAGCCCGGGTAAAGGA 61.609 63.158 24.63 0.00 41.83 3.36
2287 2803 1.229723 AAGCCCGGGTAAAGGAGGA 60.230 57.895 24.63 0.00 0.00 3.71
2289 2805 2.743179 GCCCGGGTAAAGGAGGAGG 61.743 68.421 24.63 0.00 0.00 4.30
2290 2806 2.070650 CCCGGGTAAAGGAGGAGGG 61.071 68.421 14.18 0.00 0.00 4.30
2293 2809 0.252197 CGGGTAAAGGAGGAGGGTTG 59.748 60.000 0.00 0.00 0.00 3.77
2295 2811 1.004394 GGGTAAAGGAGGAGGGTTGTG 59.996 57.143 0.00 0.00 0.00 3.33
2296 2812 1.982958 GGTAAAGGAGGAGGGTTGTGA 59.017 52.381 0.00 0.00 0.00 3.58
2297 2813 2.576648 GGTAAAGGAGGAGGGTTGTGAT 59.423 50.000 0.00 0.00 0.00 3.06
2298 2814 3.778629 GGTAAAGGAGGAGGGTTGTGATA 59.221 47.826 0.00 0.00 0.00 2.15
2299 2815 4.141688 GGTAAAGGAGGAGGGTTGTGATAG 60.142 50.000 0.00 0.00 0.00 2.08
2300 2816 2.182516 AGGAGGAGGGTTGTGATAGG 57.817 55.000 0.00 0.00 0.00 2.57
2301 2817 0.470341 GGAGGAGGGTTGTGATAGGC 59.530 60.000 0.00 0.00 0.00 3.93
2303 2819 1.840635 GAGGAGGGTTGTGATAGGCTT 59.159 52.381 0.00 0.00 0.00 4.35
2305 2821 1.408822 GGAGGGTTGTGATAGGCTTGG 60.409 57.143 0.00 0.00 0.00 3.61
2306 2822 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.000 0.00 0.00 0.00 4.52
2308 2824 0.392461 GGTTGTGATAGGCTTGGCGA 60.392 55.000 0.00 0.00 0.00 5.54
2309 2825 1.009829 GTTGTGATAGGCTTGGCGAG 58.990 55.000 0.00 0.00 0.00 5.03
2320 2836 4.458666 TGGCGAGCCAACGTAAAA 57.541 50.000 15.24 0.00 44.12 1.52
2321 2837 2.704108 TGGCGAGCCAACGTAAAAA 58.296 47.368 15.24 0.00 44.12 1.94
2322 2838 0.308376 TGGCGAGCCAACGTAAAAAC 59.692 50.000 15.24 0.00 44.12 2.43
2323 2839 0.589708 GGCGAGCCAACGTAAAAACT 59.410 50.000 9.58 0.00 35.81 2.66
2324 2840 1.399343 GGCGAGCCAACGTAAAAACTC 60.399 52.381 9.58 0.00 35.81 3.01
2325 2841 1.262151 GCGAGCCAACGTAAAAACTCA 59.738 47.619 0.00 0.00 35.59 3.41
2326 2842 2.661979 GCGAGCCAACGTAAAAACTCAG 60.662 50.000 0.00 0.00 35.59 3.35
2327 2843 2.661979 CGAGCCAACGTAAAAACTCAGC 60.662 50.000 0.00 0.00 0.00 4.26
2328 2844 1.607148 AGCCAACGTAAAAACTCAGCC 59.393 47.619 0.00 0.00 0.00 4.85
2329 2845 1.335496 GCCAACGTAAAAACTCAGCCA 59.665 47.619 0.00 0.00 0.00 4.75
2330 2846 2.857104 GCCAACGTAAAAACTCAGCCAC 60.857 50.000 0.00 0.00 0.00 5.01
2331 2847 2.616842 CCAACGTAAAAACTCAGCCACT 59.383 45.455 0.00 0.00 0.00 4.00
2332 2848 3.303791 CCAACGTAAAAACTCAGCCACTC 60.304 47.826 0.00 0.00 0.00 3.51
2333 2849 3.470645 ACGTAAAAACTCAGCCACTCT 57.529 42.857 0.00 0.00 0.00 3.24
2334 2850 3.805207 ACGTAAAAACTCAGCCACTCTT 58.195 40.909 0.00 0.00 0.00 2.85
2335 2851 4.952460 ACGTAAAAACTCAGCCACTCTTA 58.048 39.130 0.00 0.00 0.00 2.10
2336 2852 5.548406 ACGTAAAAACTCAGCCACTCTTAT 58.452 37.500 0.00 0.00 0.00 1.73
2337 2853 5.408604 ACGTAAAAACTCAGCCACTCTTATG 59.591 40.000 0.00 0.00 0.00 1.90
2338 2854 5.163854 CGTAAAAACTCAGCCACTCTTATGG 60.164 44.000 0.00 0.00 43.26 2.74
2339 2855 4.640771 AAAACTCAGCCACTCTTATGGA 57.359 40.909 0.00 0.00 43.02 3.41
2340 2856 3.902881 AACTCAGCCACTCTTATGGAG 57.097 47.619 0.00 0.00 43.02 3.86
2341 2857 3.107402 ACTCAGCCACTCTTATGGAGA 57.893 47.619 0.00 0.00 44.45 3.71
2342 2858 3.652055 ACTCAGCCACTCTTATGGAGAT 58.348 45.455 0.00 0.00 44.45 2.75
2343 2859 3.387374 ACTCAGCCACTCTTATGGAGATG 59.613 47.826 0.00 0.00 44.45 2.90
2344 2860 3.640498 CTCAGCCACTCTTATGGAGATGA 59.360 47.826 0.00 0.00 44.45 2.92
2345 2861 4.033009 TCAGCCACTCTTATGGAGATGAA 58.967 43.478 0.00 0.00 44.45 2.57
2346 2862 4.471025 TCAGCCACTCTTATGGAGATGAAA 59.529 41.667 0.00 0.00 44.45 2.69
2347 2863 4.574013 CAGCCACTCTTATGGAGATGAAAC 59.426 45.833 0.00 0.00 44.45 2.78
2348 2864 3.879892 GCCACTCTTATGGAGATGAAACC 59.120 47.826 0.00 0.00 44.45 3.27
2349 2865 4.455606 CCACTCTTATGGAGATGAAACCC 58.544 47.826 4.83 0.00 44.45 4.11
2352 2868 5.945784 CACTCTTATGGAGATGAAACCCAAA 59.054 40.000 4.83 0.00 44.45 3.28
2609 3125 5.248020 ACTGAATGACTCCTTTGATGAGACT 59.752 40.000 0.00 0.00 33.95 3.24
2935 3564 2.413837 TGAGCACCGCTTAAGAAGAAC 58.586 47.619 6.67 0.00 39.88 3.01
3352 3982 1.502163 GCGGATGATGTGGTGCTAGC 61.502 60.000 8.10 8.10 0.00 3.42
3357 3987 0.975887 TGATGTGGTGCTAGCTGACA 59.024 50.000 17.23 15.24 0.00 3.58
3363 3993 3.007940 TGTGGTGCTAGCTGACAATAGTT 59.992 43.478 17.23 0.00 0.00 2.24
3638 4268 2.571548 CCAAGCTTCCGGCATTCTT 58.428 52.632 0.00 0.00 44.79 2.52
3940 4570 1.517361 CTCCAGTGCATAGCGGACA 59.483 57.895 0.00 0.00 38.70 4.02
4101 4731 0.111061 TGTGCCAGAGCCATGAGTTT 59.889 50.000 0.00 0.00 38.69 2.66
4102 4732 1.350684 TGTGCCAGAGCCATGAGTTTA 59.649 47.619 0.00 0.00 38.69 2.01
4107 4737 3.018856 CCAGAGCCATGAGTTTATTGCA 58.981 45.455 0.00 0.00 0.00 4.08
4180 4810 3.120373 GGCTTTGTTGTTGTTGTTGTTGG 60.120 43.478 0.00 0.00 0.00 3.77
4186 4816 1.273606 TGTTGTTGTTGTTGGTGGTGG 59.726 47.619 0.00 0.00 0.00 4.61
4230 4863 5.334879 CGATTAAGTGTTGCCTAGCTTTTGT 60.335 40.000 0.00 0.00 0.00 2.83
4360 4995 8.895932 AAAATGTAATTCGTCAATAGTGCTTC 57.104 30.769 0.00 0.00 33.67 3.86
4564 8904 2.130395 CGTCGTTGAGCTGCATGATAT 58.870 47.619 1.02 0.00 0.00 1.63
4565 8905 3.004315 TCGTCGTTGAGCTGCATGATATA 59.996 43.478 1.02 0.00 0.00 0.86
4572 8912 6.346919 CGTTGAGCTGCATGATATAGGTTAAC 60.347 42.308 1.02 6.68 36.02 2.01
4579 8919 8.383619 GCTGCATGATATAGGTTAACTAAATCG 58.616 37.037 5.42 0.00 34.79 3.34
4581 8921 7.875554 TGCATGATATAGGTTAACTAAATCGCA 59.124 33.333 5.42 7.20 34.79 5.10
4787 9434 3.581024 AACGCCGTAACAGTGAGATTA 57.419 42.857 0.00 0.00 0.00 1.75
4899 9788 3.932710 GGCTTGCTTTTTAAATGGTAGGC 59.067 43.478 0.00 0.00 0.00 3.93
5062 9953 5.265350 GTGGTCTCACTTCTACCTTATCC 57.735 47.826 0.00 0.00 40.58 2.59
5063 9954 3.952323 TGGTCTCACTTCTACCTTATCCG 59.048 47.826 0.00 0.00 34.23 4.18
5064 9955 3.243468 GGTCTCACTTCTACCTTATCCGC 60.243 52.174 0.00 0.00 0.00 5.54
5065 9956 3.633065 GTCTCACTTCTACCTTATCCGCT 59.367 47.826 0.00 0.00 0.00 5.52
5066 9957 4.098196 GTCTCACTTCTACCTTATCCGCTT 59.902 45.833 0.00 0.00 0.00 4.68
5067 9958 4.098044 TCTCACTTCTACCTTATCCGCTTG 59.902 45.833 0.00 0.00 0.00 4.01
5068 9959 3.132289 TCACTTCTACCTTATCCGCTTGG 59.868 47.826 0.00 0.00 0.00 3.61
5069 9960 2.434702 ACTTCTACCTTATCCGCTTGGG 59.565 50.000 0.00 0.00 37.02 4.12
5070 9961 2.170012 TCTACCTTATCCGCTTGGGT 57.830 50.000 0.00 0.00 37.00 4.51
5071 9962 1.760613 TCTACCTTATCCGCTTGGGTG 59.239 52.381 0.00 0.00 37.00 4.61
5072 9963 0.179468 TACCTTATCCGCTTGGGTGC 59.821 55.000 0.00 0.00 37.00 5.01
5073 9964 1.224592 CCTTATCCGCTTGGGTGCT 59.775 57.895 0.00 0.00 37.00 4.40
5074 9965 0.468226 CCTTATCCGCTTGGGTGCTA 59.532 55.000 0.00 0.00 37.00 3.49
5075 9966 1.072331 CCTTATCCGCTTGGGTGCTAT 59.928 52.381 0.00 0.00 37.00 2.97
5076 9967 2.417719 CTTATCCGCTTGGGTGCTATC 58.582 52.381 0.00 0.00 37.00 2.08
5077 9968 0.685097 TATCCGCTTGGGTGCTATCC 59.315 55.000 0.00 0.00 37.00 2.59
5078 9969 2.383245 ATCCGCTTGGGTGCTATCCG 62.383 60.000 0.00 0.00 37.00 4.18
5079 9970 3.272334 CGCTTGGGTGCTATCCGC 61.272 66.667 0.00 0.00 39.77 5.54
5080 9971 3.272334 GCTTGGGTGCTATCCGCG 61.272 66.667 0.00 0.00 43.27 6.46
5081 9972 2.186903 CTTGGGTGCTATCCGCGT 59.813 61.111 4.92 0.00 43.27 6.01
5082 9973 1.449601 CTTGGGTGCTATCCGCGTT 60.450 57.895 4.92 0.00 43.27 4.84
5083 9974 1.003112 TTGGGTGCTATCCGCGTTT 60.003 52.632 4.92 0.00 43.27 3.60
5084 9975 0.249676 TTGGGTGCTATCCGCGTTTA 59.750 50.000 4.92 0.00 43.27 2.01
5085 9976 0.466543 TGGGTGCTATCCGCGTTTAT 59.533 50.000 4.92 0.00 43.27 1.40
5086 9977 1.134340 TGGGTGCTATCCGCGTTTATT 60.134 47.619 4.92 0.00 43.27 1.40
5087 9978 1.529865 GGGTGCTATCCGCGTTTATTC 59.470 52.381 4.92 0.00 43.27 1.75
5088 9979 1.191647 GGTGCTATCCGCGTTTATTCG 59.808 52.381 4.92 0.00 43.27 3.34
5095 9986 4.946766 GCGTTTATTCGCGGAGTG 57.053 55.556 6.13 0.00 46.31 3.51
5096 9987 1.347221 GCGTTTATTCGCGGAGTGG 59.653 57.895 6.13 0.00 46.31 4.00
5097 9988 1.356527 GCGTTTATTCGCGGAGTGGT 61.357 55.000 6.13 0.00 46.31 4.16
5098 9989 0.643820 CGTTTATTCGCGGAGTGGTC 59.356 55.000 6.13 0.00 39.32 4.02
5099 9990 1.734707 CGTTTATTCGCGGAGTGGTCT 60.735 52.381 6.13 0.00 39.32 3.85
5100 9991 1.925185 GTTTATTCGCGGAGTGGTCTC 59.075 52.381 6.13 0.00 39.32 3.36
5101 9992 1.179152 TTATTCGCGGAGTGGTCTCA 58.821 50.000 6.13 0.00 42.05 3.27
5102 9993 0.454600 TATTCGCGGAGTGGTCTCAC 59.545 55.000 6.13 0.00 42.05 3.51
5190 10162 2.045885 TGGACAGTTAAGGGAGGGATCT 59.954 50.000 0.00 0.00 0.00 2.75
5473 10449 5.404366 GCTTCGTCAGTAAATGTGAAGTACA 59.596 40.000 0.00 0.00 44.87 2.90
5581 10558 2.747446 CCTACATGTTGAAGGTTTCCCG 59.253 50.000 2.30 0.00 35.12 5.14
5956 10960 3.318557 CCTTACATTCTACTCCCTCCGTC 59.681 52.174 0.00 0.00 0.00 4.79
5958 10962 0.669077 CATTCTACTCCCTCCGTCCG 59.331 60.000 0.00 0.00 0.00 4.79
5959 10963 0.467659 ATTCTACTCCCTCCGTCCGG 60.468 60.000 0.00 0.00 0.00 5.14
5965 10969 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
5971 10975 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
5972 10976 1.135315 CCGTCCGGAAATACTTGTCGA 60.135 52.381 5.23 0.00 37.50 4.20
5973 10977 2.598589 CGTCCGGAAATACTTGTCGAA 58.401 47.619 5.23 0.00 0.00 3.71
5980 11018 5.022021 CGGAAATACTTGTCGAAGAAATGC 58.978 41.667 0.00 0.00 39.69 3.56
5986 11024 9.906660 AAATACTTGTCGAAGAAATGCATAAAA 57.093 25.926 0.00 0.00 39.69 1.52
5987 11025 9.906660 AATACTTGTCGAAGAAATGCATAAAAA 57.093 25.926 0.00 0.00 39.69 1.94
5990 11028 9.559958 ACTTGTCGAAGAAATGCATAAAAATAG 57.440 29.630 0.00 0.00 39.69 1.73
5993 11031 9.720667 TGTCGAAGAAATGCATAAAAATAGATG 57.279 29.630 0.00 0.00 39.69 2.90
6032 11070 8.635877 AATACGTCTAGACACATTCATTTCTC 57.364 34.615 22.37 0.00 0.00 2.87
6033 11071 5.411781 ACGTCTAGACACATTCATTTCTCC 58.588 41.667 22.37 0.00 0.00 3.71
6039 11101 4.692625 AGACACATTCATTTCTCCGACAAG 59.307 41.667 0.00 0.00 0.00 3.16
6045 11107 7.693951 CACATTCATTTCTCCGACAAGTATTTC 59.306 37.037 0.00 0.00 0.00 2.17
6046 11108 6.737254 TTCATTTCTCCGACAAGTATTTCC 57.263 37.500 0.00 0.00 0.00 3.13
6048 11110 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
6051 11113 1.894466 TCCGACAAGTATTTCCGGACA 59.106 47.619 1.83 0.00 43.47 4.02
6145 11294 4.397420 TCATTGTGTGCCTAAGTTGTGAT 58.603 39.130 0.00 0.00 0.00 3.06
6147 11296 6.000840 TCATTGTGTGCCTAAGTTGTGATTA 58.999 36.000 0.00 0.00 0.00 1.75
6588 14616 4.091509 GTCAGTGTTATAGCACGAAGTTGG 59.908 45.833 13.26 0.85 41.61 3.77
6625 14653 3.582208 TGGGCTTGAAATTAACAATGGCT 59.418 39.130 14.00 0.00 0.00 4.75
6640 14668 0.675633 TGGCTCTTCTTTTTGCAGGC 59.324 50.000 0.00 0.00 0.00 4.85
7062 18471 5.128663 GGTTTCTGTTTGGTGGGCATATTAT 59.871 40.000 0.00 0.00 0.00 1.28
7161 21933 8.902540 TCTTGAAGATAAGCAAAGTTCTGTTA 57.097 30.769 0.00 0.00 0.00 2.41
7431 24027 4.691860 AAATCACTGTGCTAGTCAATGC 57.308 40.909 2.12 0.00 37.60 3.56
7728 29019 9.180678 CAACATAAACTGAAGATTGTTTGGTAC 57.819 33.333 0.00 0.00 37.06 3.34
7782 29073 4.687219 GCTGGAGACATTGTATAAAGGCCT 60.687 45.833 0.00 0.00 41.51 5.19
7814 29105 6.752815 GTCCACAGTTAGACATAGTAGCTTTC 59.247 42.308 0.00 0.00 33.08 2.62
7874 29165 4.709886 GCAATGGTAAACAATAGGACCCTT 59.290 41.667 0.00 0.00 0.00 3.95
7992 29283 7.601856 TGTTGTATGGAATTTCTGGATCAAAC 58.398 34.615 0.00 0.00 0.00 2.93
8042 29333 3.961480 TGTTGACATGTACTCCCTCTG 57.039 47.619 0.00 0.00 0.00 3.35
8043 29334 3.239449 TGTTGACATGTACTCCCTCTGT 58.761 45.455 0.00 0.00 0.00 3.41
8044 29335 3.258372 TGTTGACATGTACTCCCTCTGTC 59.742 47.826 0.00 0.00 37.36 3.51
8045 29336 2.457598 TGACATGTACTCCCTCTGTCC 58.542 52.381 0.00 0.00 36.29 4.02
8047 29338 1.078823 ACATGTACTCCCTCTGTCCCA 59.921 52.381 0.00 0.00 0.00 4.37
8048 29339 2.293184 ACATGTACTCCCTCTGTCCCAT 60.293 50.000 0.00 0.00 0.00 4.00
8049 29340 3.052109 ACATGTACTCCCTCTGTCCCATA 60.052 47.826 0.00 0.00 0.00 2.74
8050 29341 3.769189 TGTACTCCCTCTGTCCCATAA 57.231 47.619 0.00 0.00 0.00 1.90
8051 29342 4.280789 TGTACTCCCTCTGTCCCATAAT 57.719 45.455 0.00 0.00 0.00 1.28
8052 29343 3.967326 TGTACTCCCTCTGTCCCATAATG 59.033 47.826 0.00 0.00 0.00 1.90
8053 29344 3.136641 ACTCCCTCTGTCCCATAATGT 57.863 47.619 0.00 0.00 0.00 2.71
8054 29345 4.280789 ACTCCCTCTGTCCCATAATGTA 57.719 45.455 0.00 0.00 0.00 2.29
8055 29346 4.631234 ACTCCCTCTGTCCCATAATGTAA 58.369 43.478 0.00 0.00 0.00 2.41
8056 29347 4.656112 ACTCCCTCTGTCCCATAATGTAAG 59.344 45.833 0.00 0.00 0.00 2.34
8057 29348 4.890988 TCCCTCTGTCCCATAATGTAAGA 58.109 43.478 0.00 0.00 0.00 2.10
8058 29349 4.654262 TCCCTCTGTCCCATAATGTAAGAC 59.346 45.833 0.00 0.00 0.00 3.01
8059 29350 4.408921 CCCTCTGTCCCATAATGTAAGACA 59.591 45.833 0.00 0.00 36.16 3.41
8060 29351 5.072329 CCCTCTGTCCCATAATGTAAGACAT 59.928 44.000 0.00 0.00 41.31 3.06
8062 29353 7.056635 CCTCTGTCCCATAATGTAAGACATTT 58.943 38.462 9.92 0.00 45.80 2.32
8063 29354 7.557719 CCTCTGTCCCATAATGTAAGACATTTT 59.442 37.037 9.92 0.33 45.80 1.82
8064 29355 8.877864 TCTGTCCCATAATGTAAGACATTTTT 57.122 30.769 9.92 0.00 45.80 1.94
8107 29398 5.789710 AAAACGTCTTACATTACGGGATG 57.210 39.130 0.00 0.00 43.25 3.51
8108 29399 3.447918 ACGTCTTACATTACGGGATGG 57.552 47.619 0.00 0.00 43.25 3.51
8109 29400 3.025978 ACGTCTTACATTACGGGATGGA 58.974 45.455 0.00 0.00 43.25 3.41
8110 29401 3.067742 ACGTCTTACATTACGGGATGGAG 59.932 47.826 0.00 3.51 43.25 3.86
8111 29402 3.552273 CGTCTTACATTACGGGATGGAGG 60.552 52.174 5.45 0.00 35.51 4.30
8112 29403 2.969950 TCTTACATTACGGGATGGAGGG 59.030 50.000 5.45 0.00 0.00 4.30
8113 29404 2.779429 TACATTACGGGATGGAGGGA 57.221 50.000 5.45 0.00 0.00 4.20
8114 29405 1.424638 ACATTACGGGATGGAGGGAG 58.575 55.000 5.45 0.00 0.00 4.30
8115 29406 1.344087 ACATTACGGGATGGAGGGAGT 60.344 52.381 5.45 0.00 0.00 3.85
8120 29411 0.753262 CGGGATGGAGGGAGTAGTTG 59.247 60.000 0.00 0.00 0.00 3.16
8212 29508 2.224159 AAGAGAAGGGCTGGGCGAA 61.224 57.895 0.00 0.00 0.00 4.70
8411 29708 1.571457 TGGGGACAAAAACTTCCAGGA 59.429 47.619 0.00 0.00 37.44 3.86
8426 29723 0.817634 CAGGAACCTCAACAACGCCA 60.818 55.000 0.00 0.00 0.00 5.69
8429 29726 0.307760 GAACCTCAACAACGCCACAG 59.692 55.000 0.00 0.00 0.00 3.66
8445 29742 1.521010 CAGCAGGCATCACCGAGAG 60.521 63.158 0.00 0.00 46.52 3.20
8446 29743 1.986757 AGCAGGCATCACCGAGAGT 60.987 57.895 0.00 0.00 46.52 3.24
8548 29845 2.300152 TGCACAAAGGACGAGAGAAGAT 59.700 45.455 0.00 0.00 0.00 2.40
8564 29861 3.472848 AGAAGATAATCCTCTCCCCTCCA 59.527 47.826 0.00 0.00 0.00 3.86
8823 30121 7.689299 TGTGAGGATAAATATTGGTAGGATGG 58.311 38.462 0.00 0.00 0.00 3.51
8824 30122 7.112779 GTGAGGATAAATATTGGTAGGATGGG 58.887 42.308 0.00 0.00 0.00 4.00
8825 30123 6.217487 TGAGGATAAATATTGGTAGGATGGGG 59.783 42.308 0.00 0.00 0.00 4.96
8826 30124 6.105411 AGGATAAATATTGGTAGGATGGGGT 58.895 40.000 0.00 0.00 0.00 4.95
8827 30125 7.268439 AGGATAAATATTGGTAGGATGGGGTA 58.732 38.462 0.00 0.00 0.00 3.69
8828 30126 7.184022 AGGATAAATATTGGTAGGATGGGGTAC 59.816 40.741 0.00 0.00 0.00 3.34
8829 30127 7.184022 GGATAAATATTGGTAGGATGGGGTACT 59.816 40.741 0.00 0.00 0.00 2.73
8830 30128 6.858792 AAATATTGGTAGGATGGGGTACTT 57.141 37.500 0.00 0.00 0.00 2.24
8831 30129 7.957929 AAATATTGGTAGGATGGGGTACTTA 57.042 36.000 0.00 0.00 0.00 2.24
8832 30130 6.947376 ATATTGGTAGGATGGGGTACTTAC 57.053 41.667 0.00 0.00 0.00 2.34
8833 30131 3.780516 TGGTAGGATGGGGTACTTACA 57.219 47.619 0.00 0.00 0.00 2.41
8834 30132 4.289837 TGGTAGGATGGGGTACTTACAT 57.710 45.455 0.00 0.00 0.00 2.29
8835 30133 3.971305 TGGTAGGATGGGGTACTTACATG 59.029 47.826 0.00 0.00 0.00 3.21
8842 30140 4.440826 TGGGGTACTTACATGTTTGTGT 57.559 40.909 2.30 0.84 36.53 3.72
8844 30142 5.938279 TGGGGTACTTACATGTTTGTGTTA 58.062 37.500 2.30 0.00 36.53 2.41
8865 30164 9.956797 GTGTTAAAATTTCACATGTGATATTGC 57.043 29.630 31.98 24.11 39.28 3.56
8907 30206 2.828520 CTGGTCTGACTCCTGTGTGTAT 59.171 50.000 7.85 0.00 0.00 2.29
8913 30212 2.299013 TGACTCCTGTGTGTATGGTGAC 59.701 50.000 0.00 0.00 0.00 3.67
8918 30217 2.490509 CCTGTGTGTATGGTGACGAGTA 59.509 50.000 0.00 0.00 0.00 2.59
9047 30346 1.068055 GTCTGCTGGCTTTGATGTTGG 60.068 52.381 0.00 0.00 0.00 3.77
9090 30389 0.962356 GTAGCTGTGTTGGCATGCCT 60.962 55.000 35.53 16.63 36.94 4.75
9133 30432 1.152963 GGTGGACCTGTGTTGCACT 60.153 57.895 0.00 0.00 35.11 4.40
9138 30437 2.333938 CCTGTGTTGCACTGCTGC 59.666 61.111 1.98 0.00 44.52 5.25
9149 30448 2.271173 CTGCTGCTGCTCCATCCA 59.729 61.111 17.00 0.00 40.48 3.41
9207 30506 4.970621 TGATGGTGCATCAGCCTC 57.029 55.556 13.59 2.05 44.60 4.70
9208 30507 2.304069 TGATGGTGCATCAGCCTCT 58.696 52.632 13.59 0.00 44.60 3.69
9209 30508 1.499368 TGATGGTGCATCAGCCTCTA 58.501 50.000 13.59 0.00 44.60 2.43
9210 30509 1.139654 TGATGGTGCATCAGCCTCTAC 59.860 52.381 13.59 0.00 44.60 2.59
9211 30510 1.139654 GATGGTGCATCAGCCTCTACA 59.860 52.381 3.13 0.00 40.28 2.74
9212 30511 0.538584 TGGTGCATCAGCCTCTACAG 59.461 55.000 0.00 0.00 41.13 2.74
9213 30512 0.179062 GGTGCATCAGCCTCTACAGG 60.179 60.000 0.00 0.00 43.82 4.00
9222 30521 3.127099 CCTCTACAGGCCGGATACA 57.873 57.895 10.86 0.00 30.98 2.29
9223 30522 1.633774 CCTCTACAGGCCGGATACAT 58.366 55.000 10.86 0.00 30.98 2.29
9224 30523 1.273606 CCTCTACAGGCCGGATACATG 59.726 57.143 10.86 0.00 30.98 3.21
9225 30524 2.239400 CTCTACAGGCCGGATACATGA 58.761 52.381 10.86 0.00 0.00 3.07
9226 30525 2.828520 CTCTACAGGCCGGATACATGAT 59.171 50.000 10.86 0.00 0.00 2.45
9227 30526 2.562738 TCTACAGGCCGGATACATGATG 59.437 50.000 10.86 0.00 0.00 3.07
9228 30527 0.397941 ACAGGCCGGATACATGATGG 59.602 55.000 10.86 0.00 0.00 3.51
9229 30528 0.321919 CAGGCCGGATACATGATGGG 60.322 60.000 5.05 0.00 0.00 4.00
9230 30529 0.473694 AGGCCGGATACATGATGGGA 60.474 55.000 5.05 0.00 0.00 4.37
9231 30530 0.321653 GGCCGGATACATGATGGGAC 60.322 60.000 5.05 0.00 0.00 4.46
9245 30544 1.748732 TGGGACAACCATTACCTCCA 58.251 50.000 0.00 0.00 46.80 3.86
9246 30545 1.353022 TGGGACAACCATTACCTCCAC 59.647 52.381 0.00 0.00 46.80 4.02
9247 30546 1.340697 GGGACAACCATTACCTCCACC 60.341 57.143 0.00 0.00 39.85 4.61
9248 30547 1.340697 GGACAACCATTACCTCCACCC 60.341 57.143 0.00 0.00 35.97 4.61
9249 30548 0.702316 ACAACCATTACCTCCACCCC 59.298 55.000 0.00 0.00 0.00 4.95
9250 30549 0.033503 CAACCATTACCTCCACCCCC 60.034 60.000 0.00 0.00 0.00 5.40
9266 30565 4.344237 CCCCCATCCACTCAAAGC 57.656 61.111 0.00 0.00 0.00 3.51
9267 30566 1.750399 CCCCCATCCACTCAAAGCG 60.750 63.158 0.00 0.00 0.00 4.68
9268 30567 1.002134 CCCCATCCACTCAAAGCGT 60.002 57.895 0.00 0.00 0.00 5.07
9269 30568 1.026718 CCCCATCCACTCAAAGCGTC 61.027 60.000 0.00 0.00 0.00 5.19
9270 30569 0.321564 CCCATCCACTCAAAGCGTCA 60.322 55.000 0.00 0.00 0.00 4.35
9271 30570 1.522668 CCATCCACTCAAAGCGTCAA 58.477 50.000 0.00 0.00 0.00 3.18
9272 30571 1.197721 CCATCCACTCAAAGCGTCAAC 59.802 52.381 0.00 0.00 0.00 3.18
9273 30572 1.136252 CATCCACTCAAAGCGTCAACG 60.136 52.381 0.00 0.00 43.27 4.10
9279 30578 1.082756 CAAAGCGTCAACGTCCTGC 60.083 57.895 4.29 0.00 42.22 4.85
9286 30585 1.228124 TCAACGTCCTGCCTTTGGG 60.228 57.895 0.00 0.00 0.00 4.12
9322 30799 4.406972 ACTGCTCATTTCTCTGCCTATGTA 59.593 41.667 0.00 0.00 0.00 2.29
9323 30800 4.953667 TGCTCATTTCTCTGCCTATGTAG 58.046 43.478 0.00 0.00 0.00 2.74
9324 30801 4.202295 TGCTCATTTCTCTGCCTATGTAGG 60.202 45.833 1.57 1.57 46.42 3.18
9585 31210 6.078664 ACAGTAGCAGTATAGCCCTATCTTT 58.921 40.000 0.00 0.00 34.23 2.52
9664 31377 9.872684 AACAGGGATATTTGAGATATTGTTGAT 57.127 29.630 0.00 0.00 0.00 2.57
9665 31378 9.872684 ACAGGGATATTTGAGATATTGTTGATT 57.127 29.630 0.00 0.00 0.00 2.57
9667 31380 9.872684 AGGGATATTTGAGATATTGTTGATTGT 57.127 29.630 0.00 0.00 0.00 2.71
9819 31536 5.951747 TGTTAAAGCTTTGAGGCAATCCTAT 59.048 36.000 22.02 0.00 44.46 2.57
9884 31601 1.886542 GTAGCAGTTTGACCTTTGGGG 59.113 52.381 0.00 0.00 41.89 4.96
9908 31625 6.421801 GGTTAGTGTCGTCTAGTTTTTGCTTA 59.578 38.462 0.00 0.00 0.00 3.09
9924 31641 8.547967 TTTTTGCTTAAAACATTACCACACAA 57.452 26.923 0.00 0.00 30.90 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 48 3.803778 TGAAGGAACGTCTAAAAACGGAC 59.196 43.478 0.00 0.00 46.72 4.79
201 218 5.297776 CGAGCAAATTCACCAAGGATAGATT 59.702 40.000 0.00 0.00 0.00 2.40
290 307 4.398044 AGAACAACAACCTTGTCGTTGAAT 59.602 37.500 8.36 0.00 44.88 2.57
443 462 2.154567 TCCGTAGACCACCTAGCAAT 57.845 50.000 0.00 0.00 0.00 3.56
488 507 8.499403 TGAATCATGGAAATACAACGAACATA 57.501 30.769 0.00 0.00 0.00 2.29
545 565 6.930722 CCAAGGTCTTTGCAAACTGATTTTAT 59.069 34.615 8.05 0.00 35.37 1.40
550 570 3.565307 TCCAAGGTCTTTGCAAACTGAT 58.435 40.909 8.05 0.00 35.37 2.90
553 573 3.513515 TGTTTCCAAGGTCTTTGCAAACT 59.486 39.130 8.05 0.91 44.30 2.66
562 612 5.751586 TCTACAAGTTTGTTTCCAAGGTCT 58.248 37.500 2.46 0.00 42.35 3.85
589 639 7.064253 CCATGGCAGAAAATGAAAGAAATTCTC 59.936 37.037 0.00 0.00 38.92 2.87
594 644 5.070180 TGTCCATGGCAGAAAATGAAAGAAA 59.930 36.000 6.96 0.00 0.00 2.52
648 698 1.334869 CGTGTTCTCTGGCTTGCTTTT 59.665 47.619 0.00 0.00 0.00 2.27
674 724 1.144298 GTTTCTGGTGGGTTACTGGGT 59.856 52.381 0.00 0.00 0.00 4.51
675 725 1.546998 GGTTTCTGGTGGGTTACTGGG 60.547 57.143 0.00 0.00 0.00 4.45
676 726 1.546998 GGGTTTCTGGTGGGTTACTGG 60.547 57.143 0.00 0.00 0.00 4.00
677 727 1.144093 TGGGTTTCTGGTGGGTTACTG 59.856 52.381 0.00 0.00 0.00 2.74
678 728 1.144298 GTGGGTTTCTGGTGGGTTACT 59.856 52.381 0.00 0.00 0.00 2.24
679 729 1.612676 GTGGGTTTCTGGTGGGTTAC 58.387 55.000 0.00 0.00 0.00 2.50
680 730 0.108963 CGTGGGTTTCTGGTGGGTTA 59.891 55.000 0.00 0.00 0.00 2.85
925 992 1.553706 GGGTAGGGTTTCGAGAGACA 58.446 55.000 0.00 0.00 41.84 3.41
1175 1432 3.848301 ATCACAGGCGTGCCTTGCA 62.848 57.895 11.51 0.00 45.70 4.08
1218 1475 3.264897 GTCTGCGCCGCCATGTAG 61.265 66.667 6.63 0.00 0.00 2.74
1248 1505 4.530857 GGATGCGTCACGGGGGAG 62.531 72.222 8.47 0.00 0.00 4.30
1373 1682 3.396565 TCATGGATGAAGGATGGAGGAA 58.603 45.455 0.00 0.00 33.08 3.36
1503 1812 3.453559 CGTCATCGGTAAAGGGCTT 57.546 52.632 0.00 0.00 0.00 4.35
1896 2371 3.626930 ACCGTACATATGGCCAACAATT 58.373 40.909 10.96 0.00 35.75 2.32
1897 2372 3.211045 GACCGTACATATGGCCAACAAT 58.789 45.455 10.96 0.14 35.75 2.71
1971 2487 3.519510 AGTGCTGACTATTAAGCTTCCCA 59.480 43.478 0.00 0.00 40.21 4.37
1972 2488 3.873952 CAGTGCTGACTATTAAGCTTCCC 59.126 47.826 0.00 0.00 40.21 3.97
1973 2489 4.331168 CACAGTGCTGACTATTAAGCTTCC 59.669 45.833 0.00 0.00 40.21 3.46
1975 2491 4.256920 CCACAGTGCTGACTATTAAGCTT 58.743 43.478 3.48 3.48 40.21 3.74
1976 2492 3.261897 ACCACAGTGCTGACTATTAAGCT 59.738 43.478 6.17 0.00 40.21 3.74
1977 2493 3.600388 ACCACAGTGCTGACTATTAAGC 58.400 45.455 6.17 0.00 39.96 3.09
1978 2494 4.997395 ACAACCACAGTGCTGACTATTAAG 59.003 41.667 6.17 0.00 0.00 1.85
1979 2495 4.968259 ACAACCACAGTGCTGACTATTAA 58.032 39.130 6.17 0.00 0.00 1.40
1980 2496 4.617253 ACAACCACAGTGCTGACTATTA 57.383 40.909 6.17 0.00 0.00 0.98
1981 2497 3.492102 ACAACCACAGTGCTGACTATT 57.508 42.857 6.17 0.00 0.00 1.73
1982 2498 3.492102 AACAACCACAGTGCTGACTAT 57.508 42.857 6.17 0.00 0.00 2.12
1983 2499 3.118408 AGAAACAACCACAGTGCTGACTA 60.118 43.478 6.17 0.00 0.00 2.59
1985 2501 2.017049 AGAAACAACCACAGTGCTGAC 58.983 47.619 6.17 0.96 0.00 3.51
1986 2502 2.092968 AGAGAAACAACCACAGTGCTGA 60.093 45.455 6.17 0.00 0.00 4.26
1987 2503 2.292267 AGAGAAACAACCACAGTGCTG 58.708 47.619 0.00 0.00 0.00 4.41
1988 2504 2.717639 AGAGAAACAACCACAGTGCT 57.282 45.000 0.00 0.00 0.00 4.40
1989 2505 4.320494 CCATAAGAGAAACAACCACAGTGC 60.320 45.833 0.00 0.00 0.00 4.40
1990 2506 4.821805 ACCATAAGAGAAACAACCACAGTG 59.178 41.667 0.00 0.00 0.00 3.66
1993 2509 5.441500 TGAACCATAAGAGAAACAACCACA 58.558 37.500 0.00 0.00 0.00 4.17
1994 2510 6.183360 TGTTGAACCATAAGAGAAACAACCAC 60.183 38.462 0.00 0.00 36.56 4.16
1997 2513 6.863126 CCATGTTGAACCATAAGAGAAACAAC 59.137 38.462 0.00 0.00 37.47 3.32
1998 2514 6.775142 TCCATGTTGAACCATAAGAGAAACAA 59.225 34.615 0.00 0.00 30.64 2.83
1999 2515 6.206634 GTCCATGTTGAACCATAAGAGAAACA 59.793 38.462 0.00 0.00 0.00 2.83
2000 2516 6.206634 TGTCCATGTTGAACCATAAGAGAAAC 59.793 38.462 0.00 0.00 0.00 2.78
2002 2518 5.875224 TGTCCATGTTGAACCATAAGAGAA 58.125 37.500 0.00 0.00 0.00 2.87
2004 2520 6.457392 CGAATGTCCATGTTGAACCATAAGAG 60.457 42.308 0.00 0.00 0.00 2.85
2011 2527 4.497473 TTTCGAATGTCCATGTTGAACC 57.503 40.909 0.00 0.00 0.00 3.62
2012 2528 5.460646 ACATTTCGAATGTCCATGTTGAAC 58.539 37.500 0.00 0.00 0.00 3.18
2014 2530 5.703978 AACATTTCGAATGTCCATGTTGA 57.296 34.783 19.29 0.00 36.84 3.18
2015 2531 5.750484 CAACATTTCGAATGTCCATGTTG 57.250 39.130 26.07 26.07 44.87 3.33
2016 2532 5.452078 ACAACATTTCGAATGTCCATGTT 57.548 34.783 15.90 15.90 38.35 2.71
2017 2533 5.009510 TCAACAACATTTCGAATGTCCATGT 59.990 36.000 0.00 2.33 0.00 3.21
2018 2534 5.459768 TCAACAACATTTCGAATGTCCATG 58.540 37.500 0.00 1.61 0.00 3.66
2019 2535 5.703978 TCAACAACATTTCGAATGTCCAT 57.296 34.783 0.00 0.00 0.00 3.41
2021 2537 5.920273 ACAATCAACAACATTTCGAATGTCC 59.080 36.000 0.00 0.00 0.00 4.02
2022 2538 6.636447 TGACAATCAACAACATTTCGAATGTC 59.364 34.615 0.00 5.95 37.15 3.06
2027 2543 7.148490 ACGATATGACAATCAACAACATTTCGA 60.148 33.333 18.69 0.00 41.23 3.71
2028 2544 6.960992 ACGATATGACAATCAACAACATTTCG 59.039 34.615 0.65 0.65 42.83 3.46
2029 2545 9.210426 GTACGATATGACAATCAACAACATTTC 57.790 33.333 0.00 0.00 0.00 2.17
2030 2546 8.181573 GGTACGATATGACAATCAACAACATTT 58.818 33.333 0.00 0.00 0.00 2.32
2034 2550 6.312918 ACAGGTACGATATGACAATCAACAAC 59.687 38.462 0.00 0.00 0.00 3.32
2035 2551 6.403049 ACAGGTACGATATGACAATCAACAA 58.597 36.000 0.00 0.00 0.00 2.83
2036 2552 5.972935 ACAGGTACGATATGACAATCAACA 58.027 37.500 0.00 0.00 0.00 3.33
2038 2554 7.915293 AAAACAGGTACGATATGACAATCAA 57.085 32.000 0.00 0.00 0.00 2.57
2041 2557 8.395633 GCTTAAAAACAGGTACGATATGACAAT 58.604 33.333 0.00 0.00 0.00 2.71
2044 2560 7.298507 TGCTTAAAAACAGGTACGATATGAC 57.701 36.000 0.00 0.00 0.00 3.06
2046 2562 7.850982 GTGATGCTTAAAAACAGGTACGATATG 59.149 37.037 0.00 0.00 0.00 1.78
2049 2565 5.938125 AGTGATGCTTAAAAACAGGTACGAT 59.062 36.000 0.00 0.00 0.00 3.73
2050 2566 5.178623 CAGTGATGCTTAAAAACAGGTACGA 59.821 40.000 0.00 0.00 0.00 3.43
2051 2567 5.382303 CAGTGATGCTTAAAAACAGGTACG 58.618 41.667 0.00 0.00 0.00 3.67
2052 2568 5.154222 GCAGTGATGCTTAAAAACAGGTAC 58.846 41.667 0.00 0.00 0.00 3.34
2053 2569 4.824537 TGCAGTGATGCTTAAAAACAGGTA 59.175 37.500 0.00 0.00 35.49 3.08
2054 2570 3.636300 TGCAGTGATGCTTAAAAACAGGT 59.364 39.130 0.00 0.00 35.49 4.00
2055 2571 4.241590 TGCAGTGATGCTTAAAAACAGG 57.758 40.909 0.00 0.00 35.49 4.00
2056 2572 5.344128 GTGATGCAGTGATGCTTAAAAACAG 59.656 40.000 0.00 0.00 35.49 3.16
2060 2576 3.501828 ACGTGATGCAGTGATGCTTAAAA 59.498 39.130 0.00 0.00 35.49 1.52
2061 2577 3.073678 ACGTGATGCAGTGATGCTTAAA 58.926 40.909 0.00 0.00 35.49 1.52
2062 2578 2.698803 ACGTGATGCAGTGATGCTTAA 58.301 42.857 0.00 0.00 35.49 1.85
2065 2581 1.198408 CAAACGTGATGCAGTGATGCT 59.802 47.619 0.00 0.00 35.49 3.79
2066 2582 1.069022 ACAAACGTGATGCAGTGATGC 60.069 47.619 0.00 0.00 0.00 3.91
2067 2583 2.975410 ACAAACGTGATGCAGTGATG 57.025 45.000 0.00 0.00 0.00 3.07
2070 2586 3.059884 AGTCTACAAACGTGATGCAGTG 58.940 45.455 0.00 0.00 0.00 3.66
2072 2588 2.413112 CCAGTCTACAAACGTGATGCAG 59.587 50.000 0.00 0.00 0.00 4.41
2073 2589 2.036604 TCCAGTCTACAAACGTGATGCA 59.963 45.455 0.00 0.00 0.00 3.96
2074 2590 2.668457 CTCCAGTCTACAAACGTGATGC 59.332 50.000 0.00 0.00 0.00 3.91
2075 2591 3.254060 CCTCCAGTCTACAAACGTGATG 58.746 50.000 0.00 0.00 0.00 3.07
2076 2592 2.897969 ACCTCCAGTCTACAAACGTGAT 59.102 45.455 0.00 0.00 0.00 3.06
2077 2593 2.313317 ACCTCCAGTCTACAAACGTGA 58.687 47.619 0.00 0.00 0.00 4.35
2079 2595 3.133362 TCAAACCTCCAGTCTACAAACGT 59.867 43.478 0.00 0.00 0.00 3.99
2080 2596 3.724374 TCAAACCTCCAGTCTACAAACG 58.276 45.455 0.00 0.00 0.00 3.60
2081 2597 6.635030 AATTCAAACCTCCAGTCTACAAAC 57.365 37.500 0.00 0.00 0.00 2.93
2082 2598 6.605594 ACAAATTCAAACCTCCAGTCTACAAA 59.394 34.615 0.00 0.00 0.00 2.83
2085 2601 6.635030 AACAAATTCAAACCTCCAGTCTAC 57.365 37.500 0.00 0.00 0.00 2.59
2087 2603 7.505585 TCATTAACAAATTCAAACCTCCAGTCT 59.494 33.333 0.00 0.00 0.00 3.24
2088 2604 7.595130 GTCATTAACAAATTCAAACCTCCAGTC 59.405 37.037 0.00 0.00 0.00 3.51
2089 2605 7.069331 TGTCATTAACAAATTCAAACCTCCAGT 59.931 33.333 0.00 0.00 34.03 4.00
2090 2606 7.432869 TGTCATTAACAAATTCAAACCTCCAG 58.567 34.615 0.00 0.00 34.03 3.86
2093 2609 7.147976 AGCTGTCATTAACAAATTCAAACCTC 58.852 34.615 0.00 0.00 37.45 3.85
2099 2615 9.979578 AACAATAAGCTGTCATTAACAAATTCA 57.020 25.926 0.00 0.00 37.45 2.57
2103 2619 8.637986 AGGAAACAATAAGCTGTCATTAACAAA 58.362 29.630 0.00 0.00 37.45 2.83
2104 2620 8.177119 AGGAAACAATAAGCTGTCATTAACAA 57.823 30.769 0.00 0.00 37.45 2.83
2109 2625 6.127619 GGCTAAGGAAACAATAAGCTGTCATT 60.128 38.462 0.00 0.00 0.00 2.57
2110 2626 5.358160 GGCTAAGGAAACAATAAGCTGTCAT 59.642 40.000 0.00 0.00 0.00 3.06
2111 2627 4.700213 GGCTAAGGAAACAATAAGCTGTCA 59.300 41.667 0.00 0.00 0.00 3.58
2112 2628 4.944317 AGGCTAAGGAAACAATAAGCTGTC 59.056 41.667 0.00 0.00 0.00 3.51
2113 2629 4.923415 AGGCTAAGGAAACAATAAGCTGT 58.077 39.130 0.00 0.00 0.00 4.40
2114 2630 6.599638 ACTTAGGCTAAGGAAACAATAAGCTG 59.400 38.462 31.68 8.06 40.08 4.24
2115 2631 6.722328 ACTTAGGCTAAGGAAACAATAAGCT 58.278 36.000 31.68 8.87 40.08 3.74
2117 2633 9.841880 GAAAACTTAGGCTAAGGAAACAATAAG 57.158 33.333 31.68 10.77 40.08 1.73
2119 2635 8.168058 AGGAAAACTTAGGCTAAGGAAACAATA 58.832 33.333 31.68 0.00 40.08 1.90
2122 2638 5.948842 AGGAAAACTTAGGCTAAGGAAACA 58.051 37.500 31.68 0.00 40.08 2.83
2123 2639 6.896021 AAGGAAAACTTAGGCTAAGGAAAC 57.104 37.500 31.68 20.94 40.08 2.78
2125 2641 8.999905 TTAAAAGGAAAACTTAGGCTAAGGAA 57.000 30.769 31.68 11.29 38.85 3.36
2126 2642 8.999905 TTTAAAAGGAAAACTTAGGCTAAGGA 57.000 30.769 31.68 1.75 38.85 3.36
2131 2647 8.297426 CGAAGATTTAAAAGGAAAACTTAGGCT 58.703 33.333 0.00 0.00 38.85 4.58
2170 2686 9.762381 AGAACTCCATCCTATAACTATCTTAGG 57.238 37.037 0.00 0.00 34.92 2.69
2173 2689 7.456269 CCCAGAACTCCATCCTATAACTATCTT 59.544 40.741 0.00 0.00 0.00 2.40
2174 2690 6.957020 CCCAGAACTCCATCCTATAACTATCT 59.043 42.308 0.00 0.00 0.00 1.98
2175 2691 6.954684 TCCCAGAACTCCATCCTATAACTATC 59.045 42.308 0.00 0.00 0.00 2.08
2176 2692 6.875469 TCCCAGAACTCCATCCTATAACTAT 58.125 40.000 0.00 0.00 0.00 2.12
2178 2694 5.157770 TCCCAGAACTCCATCCTATAACT 57.842 43.478 0.00 0.00 0.00 2.24
2179 2695 6.441088 AATCCCAGAACTCCATCCTATAAC 57.559 41.667 0.00 0.00 0.00 1.89
2180 2696 7.465900 AAAATCCCAGAACTCCATCCTATAA 57.534 36.000 0.00 0.00 0.00 0.98
2181 2697 7.465900 AAAAATCCCAGAACTCCATCCTATA 57.534 36.000 0.00 0.00 0.00 1.31
2184 2700 4.682021 AAAAATCCCAGAACTCCATCCT 57.318 40.909 0.00 0.00 0.00 3.24
2203 2719 4.042311 TGCTACCACCACCATAGAGAAAAA 59.958 41.667 0.00 0.00 0.00 1.94
2204 2720 3.585289 TGCTACCACCACCATAGAGAAAA 59.415 43.478 0.00 0.00 0.00 2.29
2205 2721 3.178046 TGCTACCACCACCATAGAGAAA 58.822 45.455 0.00 0.00 0.00 2.52
2206 2722 2.827755 TGCTACCACCACCATAGAGAA 58.172 47.619 0.00 0.00 0.00 2.87
2207 2723 2.543037 TGCTACCACCACCATAGAGA 57.457 50.000 0.00 0.00 0.00 3.10
2208 2724 3.845781 AATGCTACCACCACCATAGAG 57.154 47.619 0.00 0.00 0.00 2.43
2210 2726 4.096382 GTCAAAATGCTACCACCACCATAG 59.904 45.833 0.00 0.00 0.00 2.23
2211 2727 4.013728 GTCAAAATGCTACCACCACCATA 58.986 43.478 0.00 0.00 0.00 2.74
2212 2728 2.825532 GTCAAAATGCTACCACCACCAT 59.174 45.455 0.00 0.00 0.00 3.55
2215 2731 3.317993 AGTTGTCAAAATGCTACCACCAC 59.682 43.478 0.00 0.00 0.00 4.16
2216 2732 3.561143 AGTTGTCAAAATGCTACCACCA 58.439 40.909 0.00 0.00 0.00 4.17
2217 2733 3.057526 GGAGTTGTCAAAATGCTACCACC 60.058 47.826 0.00 0.00 0.00 4.61
2218 2734 3.364964 CGGAGTTGTCAAAATGCTACCAC 60.365 47.826 0.00 0.00 0.00 4.16
2219 2735 2.811431 CGGAGTTGTCAAAATGCTACCA 59.189 45.455 0.00 0.00 0.00 3.25
2220 2736 2.414161 GCGGAGTTGTCAAAATGCTACC 60.414 50.000 0.00 0.00 0.00 3.18
2221 2737 2.414161 GGCGGAGTTGTCAAAATGCTAC 60.414 50.000 0.00 0.00 0.00 3.58
2222 2738 1.810151 GGCGGAGTTGTCAAAATGCTA 59.190 47.619 0.00 0.00 0.00 3.49
2223 2739 0.598065 GGCGGAGTTGTCAAAATGCT 59.402 50.000 0.00 0.00 0.00 3.79
2224 2740 0.598065 AGGCGGAGTTGTCAAAATGC 59.402 50.000 0.00 0.00 0.00 3.56
2226 2742 3.686016 ACATAGGCGGAGTTGTCAAAAT 58.314 40.909 0.00 0.00 0.00 1.82
2227 2743 3.134574 ACATAGGCGGAGTTGTCAAAA 57.865 42.857 0.00 0.00 0.00 2.44
2228 2744 2.811431 CAACATAGGCGGAGTTGTCAAA 59.189 45.455 9.70 0.00 38.20 2.69
2229 2745 2.422597 CAACATAGGCGGAGTTGTCAA 58.577 47.619 9.70 0.00 38.20 3.18
2233 2749 2.271800 GAGACAACATAGGCGGAGTTG 58.728 52.381 14.38 14.38 45.97 3.16
2234 2750 1.899814 TGAGACAACATAGGCGGAGTT 59.100 47.619 0.00 0.00 0.00 3.01
2235 2751 1.557099 TGAGACAACATAGGCGGAGT 58.443 50.000 0.00 0.00 0.00 3.85
2236 2752 2.271800 GTTGAGACAACATAGGCGGAG 58.728 52.381 9.32 0.00 0.00 4.63
2237 2753 1.621317 TGTTGAGACAACATAGGCGGA 59.379 47.619 12.32 0.00 31.49 5.54
2238 2754 2.093306 TGTTGAGACAACATAGGCGG 57.907 50.000 12.32 0.00 31.49 6.13
2244 2760 2.027192 ACCGGCTATGTTGAGACAACAT 60.027 45.455 25.70 25.70 42.82 2.71
2246 2762 2.000447 GACCGGCTATGTTGAGACAAC 59.000 52.381 0.00 7.55 39.66 3.32
2247 2763 1.066430 GGACCGGCTATGTTGAGACAA 60.066 52.381 0.00 0.00 39.66 3.18
2248 2764 0.535335 GGACCGGCTATGTTGAGACA 59.465 55.000 0.00 0.00 40.71 3.41
2249 2765 0.179081 GGGACCGGCTATGTTGAGAC 60.179 60.000 0.00 0.00 0.00 3.36
2250 2766 0.616395 TGGGACCGGCTATGTTGAGA 60.616 55.000 0.00 0.00 0.00 3.27
2251 2767 0.251916 TTGGGACCGGCTATGTTGAG 59.748 55.000 0.00 0.00 0.00 3.02
2252 2768 0.251916 CTTGGGACCGGCTATGTTGA 59.748 55.000 0.00 0.00 0.00 3.18
2253 2769 1.376609 GCTTGGGACCGGCTATGTTG 61.377 60.000 0.00 0.00 0.00 3.33
2256 2772 2.203209 GGCTTGGGACCGGCTATG 60.203 66.667 0.00 0.00 0.00 2.23
2257 2773 3.489513 GGGCTTGGGACCGGCTAT 61.490 66.667 0.00 0.00 0.00 2.97
2267 2783 1.077716 CTCCTTTACCCGGGCTTGG 60.078 63.158 24.08 17.99 0.00 3.61
2268 2784 1.077716 CCTCCTTTACCCGGGCTTG 60.078 63.158 24.08 8.51 0.00 4.01
2269 2785 1.229723 TCCTCCTTTACCCGGGCTT 60.230 57.895 24.08 4.08 0.00 4.35
2271 2787 2.743179 CCTCCTCCTTTACCCGGGC 61.743 68.421 24.08 0.00 0.00 6.13
2272 2788 2.070650 CCCTCCTCCTTTACCCGGG 61.071 68.421 22.25 22.25 0.00 5.73
2273 2789 0.912968 AACCCTCCTCCTTTACCCGG 60.913 60.000 0.00 0.00 0.00 5.73
2274 2790 0.252197 CAACCCTCCTCCTTTACCCG 59.748 60.000 0.00 0.00 0.00 5.28
2275 2791 1.004394 CACAACCCTCCTCCTTTACCC 59.996 57.143 0.00 0.00 0.00 3.69
2276 2792 1.982958 TCACAACCCTCCTCCTTTACC 59.017 52.381 0.00 0.00 0.00 2.85
2278 2794 4.037927 CCTATCACAACCCTCCTCCTTTA 58.962 47.826 0.00 0.00 0.00 1.85
2280 2796 2.482494 CCTATCACAACCCTCCTCCTT 58.518 52.381 0.00 0.00 0.00 3.36
2281 2797 1.972207 GCCTATCACAACCCTCCTCCT 60.972 57.143 0.00 0.00 0.00 3.69
2282 2798 0.470341 GCCTATCACAACCCTCCTCC 59.530 60.000 0.00 0.00 0.00 4.30
2283 2799 1.501582 AGCCTATCACAACCCTCCTC 58.498 55.000 0.00 0.00 0.00 3.71
2284 2800 1.561542 CAAGCCTATCACAACCCTCCT 59.438 52.381 0.00 0.00 0.00 3.69
2287 2803 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.00 0.00 0.00 4.34
2289 2805 0.392461 TCGCCAAGCCTATCACAACC 60.392 55.000 0.00 0.00 0.00 3.77
2290 2806 1.009829 CTCGCCAAGCCTATCACAAC 58.990 55.000 0.00 0.00 0.00 3.32
2293 2809 3.724494 GCTCGCCAAGCCTATCAC 58.276 61.111 0.00 0.00 45.92 3.06
2303 2819 0.308376 GTTTTTACGTTGGCTCGCCA 59.692 50.000 6.52 6.52 45.63 5.69
2305 2821 1.262151 TGAGTTTTTACGTTGGCTCGC 59.738 47.619 0.00 0.00 0.00 5.03
2306 2822 2.661979 GCTGAGTTTTTACGTTGGCTCG 60.662 50.000 0.00 1.70 0.00 5.03
2308 2824 1.607148 GGCTGAGTTTTTACGTTGGCT 59.393 47.619 0.00 0.00 0.00 4.75
2309 2825 1.335496 TGGCTGAGTTTTTACGTTGGC 59.665 47.619 0.00 0.00 0.00 4.52
2310 2826 2.616842 AGTGGCTGAGTTTTTACGTTGG 59.383 45.455 0.00 0.00 0.00 3.77
2311 2827 3.560068 AGAGTGGCTGAGTTTTTACGTTG 59.440 43.478 0.00 0.00 0.00 4.10
2312 2828 3.805207 AGAGTGGCTGAGTTTTTACGTT 58.195 40.909 0.00 0.00 0.00 3.99
2313 2829 3.470645 AGAGTGGCTGAGTTTTTACGT 57.529 42.857 0.00 0.00 0.00 3.57
2314 2830 5.163854 CCATAAGAGTGGCTGAGTTTTTACG 60.164 44.000 0.00 0.00 31.43 3.18
2315 2831 5.938125 TCCATAAGAGTGGCTGAGTTTTTAC 59.062 40.000 0.00 0.00 39.19 2.01
2316 2832 6.013725 TCTCCATAAGAGTGGCTGAGTTTTTA 60.014 38.462 0.00 0.00 43.71 1.52
2317 2833 4.985538 TCCATAAGAGTGGCTGAGTTTTT 58.014 39.130 0.00 0.00 39.19 1.94
2318 2834 4.287067 TCTCCATAAGAGTGGCTGAGTTTT 59.713 41.667 0.00 0.00 43.71 2.43
2319 2835 3.840666 TCTCCATAAGAGTGGCTGAGTTT 59.159 43.478 0.00 0.00 43.71 2.66
2320 2836 3.445008 TCTCCATAAGAGTGGCTGAGTT 58.555 45.455 0.00 0.00 43.71 3.01
2321 2837 3.107402 TCTCCATAAGAGTGGCTGAGT 57.893 47.619 0.00 0.00 43.71 3.41
2322 2838 3.640498 TCATCTCCATAAGAGTGGCTGAG 59.360 47.826 0.00 0.00 43.71 3.35
2323 2839 3.646534 TCATCTCCATAAGAGTGGCTGA 58.353 45.455 0.00 0.00 43.71 4.26
2324 2840 4.412796 TTCATCTCCATAAGAGTGGCTG 57.587 45.455 0.00 0.00 43.71 4.85
2325 2841 4.384647 GGTTTCATCTCCATAAGAGTGGCT 60.385 45.833 0.00 0.00 43.71 4.75
2326 2842 3.879892 GGTTTCATCTCCATAAGAGTGGC 59.120 47.826 0.00 0.00 43.71 5.01
2327 2843 4.080356 TGGGTTTCATCTCCATAAGAGTGG 60.080 45.833 0.00 0.00 43.71 4.00
2328 2844 5.102953 TGGGTTTCATCTCCATAAGAGTG 57.897 43.478 0.00 0.00 43.71 3.51
2329 2845 5.779241 TTGGGTTTCATCTCCATAAGAGT 57.221 39.130 0.00 0.00 43.71 3.24
2330 2846 5.945784 TGTTTGGGTTTCATCTCCATAAGAG 59.054 40.000 0.00 0.00 44.75 2.85
2331 2847 5.886609 TGTTTGGGTTTCATCTCCATAAGA 58.113 37.500 0.00 0.00 38.72 2.10
2332 2848 6.350445 CCTTGTTTGGGTTTCATCTCCATAAG 60.350 42.308 0.00 0.00 0.00 1.73
2333 2849 5.480073 CCTTGTTTGGGTTTCATCTCCATAA 59.520 40.000 0.00 0.00 0.00 1.90
2334 2850 5.016173 CCTTGTTTGGGTTTCATCTCCATA 58.984 41.667 0.00 0.00 0.00 2.74
2335 2851 3.834231 CCTTGTTTGGGTTTCATCTCCAT 59.166 43.478 0.00 0.00 0.00 3.41
2336 2852 3.230134 CCTTGTTTGGGTTTCATCTCCA 58.770 45.455 0.00 0.00 0.00 3.86
2337 2853 2.562738 CCCTTGTTTGGGTTTCATCTCC 59.437 50.000 0.00 0.00 42.25 3.71
2338 2854 2.562738 CCCCTTGTTTGGGTTTCATCTC 59.437 50.000 0.00 0.00 45.70 2.75
2339 2855 2.608623 CCCCTTGTTTGGGTTTCATCT 58.391 47.619 0.00 0.00 45.70 2.90
2348 2864 2.989253 GCCCGACCCCTTGTTTGG 60.989 66.667 0.00 0.00 0.00 3.28
2349 2865 0.322997 TATGCCCGACCCCTTGTTTG 60.323 55.000 0.00 0.00 0.00 2.93
2352 2868 0.986019 TCATATGCCCGACCCCTTGT 60.986 55.000 0.00 0.00 0.00 3.16
2609 3125 1.208870 CCGCACAAAACGCATGCTA 59.791 52.632 17.13 0.00 37.20 3.49
2935 3564 2.286713 TGATTTTTGGTCACGCTTGTCG 60.287 45.455 0.00 0.00 45.38 4.35
3352 3982 1.406887 CCCCCGTCCAACTATTGTCAG 60.407 57.143 0.00 0.00 0.00 3.51
3357 3987 4.103627 CCTATTTACCCCCGTCCAACTATT 59.896 45.833 0.00 0.00 0.00 1.73
3363 3993 2.121129 CTTCCTATTTACCCCCGTCCA 58.879 52.381 0.00 0.00 0.00 4.02
3412 4042 6.271624 AGTTCTACTAAGCCTAAACCCTTTCA 59.728 38.462 0.00 0.00 0.00 2.69
3629 4259 2.807967 TCTCTTGTCACAAAGAATGCCG 59.192 45.455 0.00 0.00 35.79 5.69
3732 4362 2.033299 ACTGTTGAACATGTCGCCTTTG 59.967 45.455 0.00 0.00 0.00 2.77
3940 4570 0.108138 ATTCTCCGCACGCTTTAGCT 60.108 50.000 0.00 0.00 39.32 3.32
4101 4731 7.333528 GTGAAACCCATAAGATCTTGCAATA 57.666 36.000 18.47 0.00 0.00 1.90
4102 4732 6.212888 GTGAAACCCATAAGATCTTGCAAT 57.787 37.500 18.47 0.53 0.00 3.56
4180 4810 2.030274 GTCAAAATGCTACCACCACCAC 60.030 50.000 0.00 0.00 0.00 4.16
4186 4816 3.435327 TCGACATGTCAAAATGCTACCAC 59.565 43.478 24.93 0.00 0.00 4.16
4230 4863 3.799420 GTGCGCCAATGTTTTTAACAGAA 59.201 39.130 4.18 0.00 45.95 3.02
4341 4976 4.751060 ACGGAAGCACTATTGACGAATTA 58.249 39.130 0.00 0.00 0.00 1.40
4464 5099 4.141892 GGAAGGGTACTAAGAGGAAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
4564 8904 8.689061 TGAGTAGATTGCGATTTAGTTAACCTA 58.311 33.333 0.88 0.00 0.00 3.08
4565 8905 7.553334 TGAGTAGATTGCGATTTAGTTAACCT 58.447 34.615 0.88 0.00 0.00 3.50
4572 8912 7.467623 AGCTTTTTGAGTAGATTGCGATTTAG 58.532 34.615 0.00 0.00 0.00 1.85
4579 8919 4.013050 AGGGAGCTTTTTGAGTAGATTGC 58.987 43.478 0.00 0.00 0.00 3.56
4581 8921 6.374417 TGTAGGGAGCTTTTTGAGTAGATT 57.626 37.500 0.00 0.00 0.00 2.40
4787 9434 1.923909 CCGGAGAGGGGGAAAAGGT 60.924 63.158 0.00 0.00 35.97 3.50
5057 9948 1.071699 GGATAGCACCCAAGCGGATAA 59.928 52.381 0.00 0.00 40.15 1.75
5058 9949 0.685097 GGATAGCACCCAAGCGGATA 59.315 55.000 0.00 0.00 40.15 2.59
5059 9950 1.451936 GGATAGCACCCAAGCGGAT 59.548 57.895 0.00 0.00 40.15 4.18
5060 9951 2.908015 GGATAGCACCCAAGCGGA 59.092 61.111 0.00 0.00 40.15 5.54
5061 9952 2.588877 CGGATAGCACCCAAGCGG 60.589 66.667 0.00 0.00 40.15 5.52
5079 9970 0.643820 GACCACTCCGCGAATAAACG 59.356 55.000 8.23 0.00 0.00 3.60
5080 9971 1.925185 GAGACCACTCCGCGAATAAAC 59.075 52.381 8.23 0.00 37.19 2.01
5081 9972 1.546923 TGAGACCACTCCGCGAATAAA 59.453 47.619 8.23 0.00 41.99 1.40
5082 9973 1.135199 GTGAGACCACTCCGCGAATAA 60.135 52.381 8.23 0.00 41.99 1.40
5083 9974 0.454600 GTGAGACCACTCCGCGAATA 59.545 55.000 8.23 0.00 41.99 1.75
5084 9975 1.215647 GTGAGACCACTCCGCGAAT 59.784 57.895 8.23 0.00 41.99 3.34
5085 9976 2.649034 GTGAGACCACTCCGCGAA 59.351 61.111 8.23 0.00 41.99 4.70
5093 9984 4.202030 CGGATAAGGTAGAAGTGAGACCAC 60.202 50.000 0.00 0.00 43.50 4.16
5094 9985 3.952323 CGGATAAGGTAGAAGTGAGACCA 59.048 47.826 0.00 0.00 35.56 4.02
5095 9986 3.243468 GCGGATAAGGTAGAAGTGAGACC 60.243 52.174 0.00 0.00 0.00 3.85
5096 9987 3.633065 AGCGGATAAGGTAGAAGTGAGAC 59.367 47.826 0.00 0.00 0.00 3.36
5097 9988 3.899726 AGCGGATAAGGTAGAAGTGAGA 58.100 45.455 0.00 0.00 0.00 3.27
5098 9989 4.363999 CAAGCGGATAAGGTAGAAGTGAG 58.636 47.826 0.00 0.00 0.00 3.51
5099 9990 3.132289 CCAAGCGGATAAGGTAGAAGTGA 59.868 47.826 0.00 0.00 0.00 3.41
5100 9991 3.458189 CCAAGCGGATAAGGTAGAAGTG 58.542 50.000 0.00 0.00 0.00 3.16
5101 9992 2.434702 CCCAAGCGGATAAGGTAGAAGT 59.565 50.000 0.00 0.00 0.00 3.01
5102 9993 2.434702 ACCCAAGCGGATAAGGTAGAAG 59.565 50.000 0.00 0.00 34.64 2.85
5103 9994 2.169769 CACCCAAGCGGATAAGGTAGAA 59.830 50.000 0.00 0.00 34.64 2.10
5104 9995 1.760613 CACCCAAGCGGATAAGGTAGA 59.239 52.381 0.00 0.00 34.64 2.59
5105 9996 1.810412 GCACCCAAGCGGATAAGGTAG 60.810 57.143 0.00 0.00 34.64 3.18
5106 9997 0.179468 GCACCCAAGCGGATAAGGTA 59.821 55.000 0.00 0.00 34.64 3.08
5107 9998 1.077716 GCACCCAAGCGGATAAGGT 60.078 57.895 0.00 0.00 34.64 3.50
5108 9999 0.815615 GAGCACCCAAGCGGATAAGG 60.816 60.000 0.00 0.00 40.15 2.69
5109 10000 0.179000 AGAGCACCCAAGCGGATAAG 59.821 55.000 0.00 0.00 40.15 1.73
5190 10162 2.243736 CAAATAGGGCTAAAGGGGGACA 59.756 50.000 0.00 0.00 0.00 4.02
5473 10449 7.716799 TGCACCAGGTCAATTAAATAATTCT 57.283 32.000 0.00 0.00 33.88 2.40
5581 10558 0.175073 CCCGTCTAGTACAGTTGGGC 59.825 60.000 0.00 0.00 34.47 5.36
5956 10960 5.560148 CATTTCTTCGACAAGTATTTCCGG 58.440 41.667 0.00 0.00 0.00 5.14
5958 10962 5.938322 TGCATTTCTTCGACAAGTATTTCC 58.062 37.500 0.00 0.00 0.00 3.13
5959 10963 9.554724 TTTATGCATTTCTTCGACAAGTATTTC 57.445 29.630 3.54 0.00 0.00 2.17
5965 10969 9.773328 TCTATTTTTATGCATTTCTTCGACAAG 57.227 29.630 3.54 0.00 0.00 3.16
6017 11055 4.452455 ACTTGTCGGAGAAATGAATGTGTC 59.548 41.667 0.00 0.00 39.69 3.67
6019 11057 6.668541 ATACTTGTCGGAGAAATGAATGTG 57.331 37.500 0.00 0.00 39.69 3.21
6024 11062 4.868171 CGGAAATACTTGTCGGAGAAATGA 59.132 41.667 0.00 0.00 39.69 2.57
6026 11064 4.081309 TCCGGAAATACTTGTCGGAGAAAT 60.081 41.667 0.00 0.00 43.84 2.17
6028 11066 2.827322 TCCGGAAATACTTGTCGGAGAA 59.173 45.455 0.00 0.00 43.84 2.87
6030 11068 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
6032 11070 2.094390 TCTGTCCGGAAATACTTGTCGG 60.094 50.000 5.23 0.00 41.80 4.79
6033 11071 3.179830 CTCTGTCCGGAAATACTTGTCG 58.820 50.000 5.23 0.00 0.00 4.35
6039 11101 2.108970 ACTCCCTCTGTCCGGAAATAC 58.891 52.381 5.23 0.00 0.00 1.89
6045 11107 2.660670 ATACTACTCCCTCTGTCCGG 57.339 55.000 0.00 0.00 0.00 5.14
6046 11108 3.822940 AGAATACTACTCCCTCTGTCCG 58.177 50.000 0.00 0.00 0.00 4.79
6147 11296 9.565213 GACAACTGTCGTAAGTACTTATGTAAT 57.435 33.333 26.59 13.27 35.12 1.89
6588 14616 0.809636 GCCCACAACCAAACAAGTGC 60.810 55.000 0.00 0.00 0.00 4.40
6625 14653 5.789643 ACAAATAGCCTGCAAAAAGAAGA 57.210 34.783 0.00 0.00 0.00 2.87
6640 14668 4.794762 CGGTCATGCATGTCAAACAAATAG 59.205 41.667 25.43 4.18 0.00 1.73
6702 14731 2.375174 AGCCATCAGTTTACCTTGGACA 59.625 45.455 0.00 0.00 0.00 4.02
7083 21855 3.168035 TGTCATGGCCCTTGTGTAATT 57.832 42.857 0.00 0.00 0.00 1.40
7161 21933 6.469782 ACAACAGAAAACATCTTTGGACAT 57.530 33.333 0.00 0.00 35.73 3.06
7294 22067 2.757868 GCATATGGTTACTTGGTTGGCA 59.242 45.455 4.56 0.00 0.00 4.92
7431 24027 0.038744 AGGCCATTCCTCACAACCTG 59.961 55.000 5.01 0.00 43.20 4.00
7782 29073 3.774766 ATGTCTAACTGTGGACAGCCATA 59.225 43.478 17.38 0.00 46.96 2.74
7814 29105 4.067896 ACACACTAAATCTGCAGGTCTTG 58.932 43.478 15.13 4.76 0.00 3.02
7874 29165 8.821817 TGCCAAGATAGCATACCAATACTAATA 58.178 33.333 0.00 0.00 34.69 0.98
7964 29255 5.512942 TCCAGAAATTCCATACAACAGGA 57.487 39.130 0.00 0.00 0.00 3.86
7992 29283 6.810182 CCTTAGATGCAGAAAGATTGTTTTGG 59.190 38.462 6.96 0.00 0.00 3.28
8034 29325 8.839392 ATGTCTTACATTATGGGACAGAGGGAG 61.839 44.444 17.20 0.00 37.35 4.30
8036 29327 5.072329 ATGTCTTACATTATGGGACAGAGGG 59.928 44.000 17.20 0.00 37.35 4.30
8037 29328 6.179906 ATGTCTTACATTATGGGACAGAGG 57.820 41.667 17.20 0.00 37.35 3.69
8084 29375 5.122711 CCATCCCGTAATGTAAGACGTTTTT 59.877 40.000 0.00 0.00 37.36 1.94
8085 29376 4.632688 CCATCCCGTAATGTAAGACGTTTT 59.367 41.667 0.00 0.00 37.36 2.43
8086 29377 4.081531 TCCATCCCGTAATGTAAGACGTTT 60.082 41.667 0.00 0.00 37.36 3.60
8087 29378 3.448301 TCCATCCCGTAATGTAAGACGTT 59.552 43.478 0.00 0.00 37.36 3.99
8088 29379 3.025978 TCCATCCCGTAATGTAAGACGT 58.974 45.455 0.00 0.00 37.36 4.34
8089 29380 3.552273 CCTCCATCCCGTAATGTAAGACG 60.552 52.174 0.00 0.00 38.79 4.18
8090 29381 3.244112 CCCTCCATCCCGTAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
8091 29382 2.969950 CCCTCCATCCCGTAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
8092 29383 2.969950 TCCCTCCATCCCGTAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
8093 29384 2.969950 CTCCCTCCATCCCGTAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
8094 29385 2.090943 ACTCCCTCCATCCCGTAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
8095 29386 1.344087 ACTCCCTCCATCCCGTAATGT 60.344 52.381 0.00 0.00 0.00 2.71
8096 29387 1.424638 ACTCCCTCCATCCCGTAATG 58.575 55.000 0.00 0.00 0.00 1.90
8097 29388 2.179424 ACTACTCCCTCCATCCCGTAAT 59.821 50.000 0.00 0.00 0.00 1.89
8098 29389 1.572415 ACTACTCCCTCCATCCCGTAA 59.428 52.381 0.00 0.00 0.00 3.18
8099 29390 1.229131 ACTACTCCCTCCATCCCGTA 58.771 55.000 0.00 0.00 0.00 4.02
8100 29391 0.338814 AACTACTCCCTCCATCCCGT 59.661 55.000 0.00 0.00 0.00 5.28
8101 29392 0.753262 CAACTACTCCCTCCATCCCG 59.247 60.000 0.00 0.00 0.00 5.14
8102 29393 1.132500 CCAACTACTCCCTCCATCCC 58.868 60.000 0.00 0.00 0.00 3.85
8103 29394 1.132500 CCCAACTACTCCCTCCATCC 58.868 60.000 0.00 0.00 0.00 3.51
8104 29395 1.880941 ACCCAACTACTCCCTCCATC 58.119 55.000 0.00 0.00 0.00 3.51
8105 29396 2.361085 AACCCAACTACTCCCTCCAT 57.639 50.000 0.00 0.00 0.00 3.41
8106 29397 2.113052 ACTAACCCAACTACTCCCTCCA 59.887 50.000 0.00 0.00 0.00 3.86
8107 29398 2.765135 GACTAACCCAACTACTCCCTCC 59.235 54.545 0.00 0.00 0.00 4.30
8108 29399 2.765135 GGACTAACCCAACTACTCCCTC 59.235 54.545 0.00 0.00 0.00 4.30
8109 29400 2.113052 TGGACTAACCCAACTACTCCCT 59.887 50.000 0.00 0.00 38.00 4.20
8110 29401 2.543635 TGGACTAACCCAACTACTCCC 58.456 52.381 0.00 0.00 38.00 4.30
8120 29411 3.646736 AGGTAAGCATTGGACTAACCC 57.353 47.619 0.00 0.00 38.00 4.11
8212 29508 4.220724 TGTTGACACTGGTCTAGTTAGGT 58.779 43.478 0.00 0.00 44.61 3.08
8411 29708 1.724582 GCTGTGGCGTTGTTGAGGTT 61.725 55.000 0.00 0.00 0.00 3.50
8426 29723 2.236223 CTCTCGGTGATGCCTGCTGT 62.236 60.000 0.00 0.00 34.25 4.40
8429 29726 2.581354 ACTCTCGGTGATGCCTGC 59.419 61.111 0.00 0.00 34.25 4.85
8445 29742 0.107459 GTCCTCTGGCTCCAATCCAC 60.107 60.000 0.00 0.00 0.00 4.02
8446 29743 0.252881 AGTCCTCTGGCTCCAATCCA 60.253 55.000 0.00 0.00 0.00 3.41
8548 29845 0.759436 GCGTGGAGGGGAGAGGATTA 60.759 60.000 0.00 0.00 0.00 1.75
8743 30041 6.518493 CAACACTACACCTAAAGAAGTGGTA 58.482 40.000 5.83 0.00 41.43 3.25
8823 30121 9.752961 AATTTTAACACAAACATGTAAGTACCC 57.247 29.630 0.00 0.00 30.75 3.69
8831 30129 9.160496 ACATGTGAAATTTTAACACAAACATGT 57.840 25.926 13.32 10.82 46.40 3.21
8832 30130 9.423427 CACATGTGAAATTTTAACACAAACATG 57.577 29.630 21.64 13.41 45.34 3.21
8833 30131 9.376075 TCACATGTGAAATTTTAACACAAACAT 57.624 25.926 26.02 3.00 45.34 2.71
8834 30132 8.763049 TCACATGTGAAATTTTAACACAAACA 57.237 26.923 26.02 0.00 45.34 2.83
8842 30140 9.800433 ATCGCAATATCACATGTGAAATTTTAA 57.200 25.926 31.00 15.61 43.58 1.52
8844 30142 7.254185 GCATCGCAATATCACATGTGAAATTTT 60.254 33.333 31.00 17.27 43.58 1.82
8851 30149 2.221517 TCGCATCGCAATATCACATGTG 59.778 45.455 20.18 20.18 0.00 3.21
8865 30164 2.219674 GGCAGAAGTTAGAATCGCATCG 59.780 50.000 0.00 0.00 0.00 3.84
8907 30206 1.472878 GCAGATCTGTACTCGTCACCA 59.527 52.381 23.38 0.00 0.00 4.17
8913 30212 0.743688 AGGCAGCAGATCTGTACTCG 59.256 55.000 23.38 9.13 44.66 4.18
8918 30217 2.283145 ACAAAAGGCAGCAGATCTGT 57.717 45.000 23.38 8.16 44.66 3.41
9090 30389 5.616270 TGTAGACAGTGCTACAAAATGGAA 58.384 37.500 18.89 1.24 45.55 3.53
9117 30416 1.823470 GCAGTGCAACACAGGTCCA 60.823 57.895 11.09 0.00 41.43 4.02
9133 30432 1.453197 CATGGATGGAGCAGCAGCA 60.453 57.895 3.17 0.00 45.49 4.41
9138 30437 1.675116 CCGCTATCATGGATGGAGCAG 60.675 57.143 12.22 7.02 37.15 4.24
9149 30448 2.887783 ACGAAGACAGATCCGCTATCAT 59.112 45.455 0.00 0.00 37.03 2.45
9204 30503 1.273606 CATGTATCCGGCCTGTAGAGG 59.726 57.143 0.31 0.31 43.19 3.69
9205 30504 2.239400 TCATGTATCCGGCCTGTAGAG 58.761 52.381 0.00 0.00 0.00 2.43
9206 30505 2.375014 TCATGTATCCGGCCTGTAGA 57.625 50.000 0.00 0.00 0.00 2.59
9207 30506 2.354103 CCATCATGTATCCGGCCTGTAG 60.354 54.545 0.00 0.00 0.00 2.74
9208 30507 1.623311 CCATCATGTATCCGGCCTGTA 59.377 52.381 0.00 0.00 0.00 2.74
9209 30508 0.397941 CCATCATGTATCCGGCCTGT 59.602 55.000 0.00 0.00 0.00 4.00
9210 30509 0.321919 CCCATCATGTATCCGGCCTG 60.322 60.000 0.00 0.00 0.00 4.85
9211 30510 0.473694 TCCCATCATGTATCCGGCCT 60.474 55.000 0.00 0.00 0.00 5.19
9212 30511 0.321653 GTCCCATCATGTATCCGGCC 60.322 60.000 0.00 0.00 0.00 6.13
9213 30512 0.396435 TGTCCCATCATGTATCCGGC 59.604 55.000 0.00 0.00 0.00 6.13
9214 30513 2.494059 GTTGTCCCATCATGTATCCGG 58.506 52.381 0.00 0.00 0.00 5.14
9215 30514 2.158827 TGGTTGTCCCATCATGTATCCG 60.159 50.000 0.00 0.00 38.72 4.18
9216 30515 3.576078 TGGTTGTCCCATCATGTATCC 57.424 47.619 0.00 0.00 38.72 2.59
9227 30526 1.340697 GGTGGAGGTAATGGTTGTCCC 60.341 57.143 0.00 0.00 0.00 4.46
9228 30527 1.340697 GGGTGGAGGTAATGGTTGTCC 60.341 57.143 0.00 0.00 0.00 4.02
9229 30528 1.340697 GGGGTGGAGGTAATGGTTGTC 60.341 57.143 0.00 0.00 0.00 3.18
9230 30529 0.702316 GGGGTGGAGGTAATGGTTGT 59.298 55.000 0.00 0.00 0.00 3.32
9231 30530 0.033503 GGGGGTGGAGGTAATGGTTG 60.034 60.000 0.00 0.00 0.00 3.77
9232 30531 2.405572 GGGGGTGGAGGTAATGGTT 58.594 57.895 0.00 0.00 0.00 3.67
9233 30532 4.181646 GGGGGTGGAGGTAATGGT 57.818 61.111 0.00 0.00 0.00 3.55
9249 30548 1.750399 CGCTTTGAGTGGATGGGGG 60.750 63.158 0.00 0.00 0.00 5.40
9250 30549 1.002134 ACGCTTTGAGTGGATGGGG 60.002 57.895 0.00 0.00 0.00 4.96
9251 30550 0.321564 TGACGCTTTGAGTGGATGGG 60.322 55.000 0.00 0.00 0.00 4.00
9252 30551 1.197721 GTTGACGCTTTGAGTGGATGG 59.802 52.381 0.00 0.00 0.00 3.51
9253 30552 1.136252 CGTTGACGCTTTGAGTGGATG 60.136 52.381 0.00 0.00 0.00 3.51
9254 30553 1.148310 CGTTGACGCTTTGAGTGGAT 58.852 50.000 0.00 0.00 0.00 3.41
9255 30554 0.179094 ACGTTGACGCTTTGAGTGGA 60.179 50.000 3.05 0.00 44.43 4.02
9256 30555 0.232303 GACGTTGACGCTTTGAGTGG 59.768 55.000 3.05 0.00 44.43 4.00
9257 30556 0.232303 GGACGTTGACGCTTTGAGTG 59.768 55.000 3.05 0.00 44.43 3.51
9258 30557 0.104304 AGGACGTTGACGCTTTGAGT 59.896 50.000 3.05 0.00 44.43 3.41
9259 30558 0.508641 CAGGACGTTGACGCTTTGAG 59.491 55.000 3.05 0.00 44.43 3.02
9260 30559 1.495584 GCAGGACGTTGACGCTTTGA 61.496 55.000 3.05 0.00 44.43 2.69
9261 30560 1.082756 GCAGGACGTTGACGCTTTG 60.083 57.895 3.05 1.00 44.43 2.77
9262 30561 2.251642 GGCAGGACGTTGACGCTTT 61.252 57.895 3.05 0.00 44.43 3.51
9263 30562 2.660258 AAGGCAGGACGTTGACGCTT 62.660 55.000 3.05 0.00 44.43 4.68
9264 30563 2.660258 AAAGGCAGGACGTTGACGCT 62.660 55.000 3.05 0.00 44.43 5.07
9265 30564 2.251642 AAAGGCAGGACGTTGACGC 61.252 57.895 3.05 0.00 44.43 5.19
9266 30565 1.569493 CAAAGGCAGGACGTTGACG 59.431 57.895 1.41 1.41 46.33 4.35
9267 30566 1.515521 CCCAAAGGCAGGACGTTGAC 61.516 60.000 2.22 0.00 32.63 3.18
9268 30567 1.228124 CCCAAAGGCAGGACGTTGA 60.228 57.895 2.22 0.00 32.63 3.18
9269 30568 1.106944 AACCCAAAGGCAGGACGTTG 61.107 55.000 0.00 0.00 36.11 4.10
9270 30569 1.106944 CAACCCAAAGGCAGGACGTT 61.107 55.000 0.00 0.00 36.11 3.99
9271 30570 1.528309 CAACCCAAAGGCAGGACGT 60.528 57.895 0.00 0.00 36.11 4.34
9272 30571 1.528309 ACAACCCAAAGGCAGGACG 60.528 57.895 0.00 0.00 36.11 4.79
9273 30572 2.041153 CACAACCCAAAGGCAGGAC 58.959 57.895 0.00 0.00 36.11 3.85
9279 30578 2.689553 AAACAAGCACAACCCAAAGG 57.310 45.000 0.00 0.00 40.04 3.11
9286 30585 3.691049 TGAGCAGTAAACAAGCACAAC 57.309 42.857 0.00 0.00 0.00 3.32
9418 30895 9.182214 ACATAAGCATCAACAAAATCAGATACT 57.818 29.630 0.00 0.00 0.00 2.12
9468 31090 5.824904 AAGCTACAACCATAAGCATCAAG 57.175 39.130 0.00 0.00 38.75 3.02
9674 31387 6.572519 AGTGATGCTCAAAAACAGCTAAAAA 58.427 32.000 0.00 0.00 37.79 1.94
9675 31388 6.147864 AGTGATGCTCAAAAACAGCTAAAA 57.852 33.333 0.00 0.00 37.79 1.52
9676 31389 5.772825 AGTGATGCTCAAAAACAGCTAAA 57.227 34.783 0.00 0.00 37.79 1.85
9677 31390 5.762711 TGTAGTGATGCTCAAAAACAGCTAA 59.237 36.000 0.00 0.00 37.79 3.09
9678 31391 5.304778 TGTAGTGATGCTCAAAAACAGCTA 58.695 37.500 0.00 0.00 37.79 3.32
9679 31392 4.136796 TGTAGTGATGCTCAAAAACAGCT 58.863 39.130 0.00 0.00 37.79 4.24
9680 31393 4.488126 TGTAGTGATGCTCAAAAACAGC 57.512 40.909 0.00 0.00 37.40 4.40
9681 31394 7.094634 ACCTAATGTAGTGATGCTCAAAAACAG 60.095 37.037 0.00 0.00 0.00 3.16
9682 31395 6.714810 ACCTAATGTAGTGATGCTCAAAAACA 59.285 34.615 0.00 0.00 0.00 2.83
9683 31396 7.145932 ACCTAATGTAGTGATGCTCAAAAAC 57.854 36.000 0.00 0.00 0.00 2.43
9684 31397 7.759489 AACCTAATGTAGTGATGCTCAAAAA 57.241 32.000 0.00 0.00 0.00 1.94
9685 31398 7.759489 AAACCTAATGTAGTGATGCTCAAAA 57.241 32.000 0.00 0.00 0.00 2.44
9686 31399 7.230510 ACAAAACCTAATGTAGTGATGCTCAAA 59.769 33.333 0.00 0.00 0.00 2.69
9687 31400 6.714810 ACAAAACCTAATGTAGTGATGCTCAA 59.285 34.615 0.00 0.00 0.00 3.02
9688 31401 6.237901 ACAAAACCTAATGTAGTGATGCTCA 58.762 36.000 0.00 0.00 0.00 4.26
9689 31402 6.743575 ACAAAACCTAATGTAGTGATGCTC 57.256 37.500 0.00 0.00 0.00 4.26
9690 31403 7.549488 GTCTACAAAACCTAATGTAGTGATGCT 59.451 37.037 11.43 0.00 45.83 3.79
9691 31404 7.549488 AGTCTACAAAACCTAATGTAGTGATGC 59.451 37.037 11.43 0.00 45.83 3.91
9704 31417 9.010029 CCAAACATGTATTAGTCTACAAAACCT 57.990 33.333 0.00 0.00 35.37 3.50
9705 31418 9.005777 TCCAAACATGTATTAGTCTACAAAACC 57.994 33.333 0.00 0.00 35.37 3.27
9819 31536 5.363868 CCAGAACTCCATCCTATAACTGTCA 59.636 44.000 0.00 0.00 0.00 3.58
9834 31551 5.365619 TGTAGAAAAGAACACCAGAACTCC 58.634 41.667 0.00 0.00 0.00 3.85
9884 31601 5.902051 AGCAAAAACTAGACGACACTAAC 57.098 39.130 0.00 0.00 0.00 2.34
9908 31625 5.678616 GCTGACAGTTGTGTGGTAATGTTTT 60.679 40.000 3.99 0.00 36.88 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.