Multiple sequence alignment - TraesCS5A01G308700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G308700 chr5A 100.000 5115 0 0 1 5115 521027359 521022245 0.000000e+00 9446
1 TraesCS5A01G308700 chr5D 87.005 4648 325 125 632 5115 409943666 409939134 0.000000e+00 4979
2 TraesCS5A01G308700 chr5D 90.323 341 27 4 150 486 409987999 409987661 4.700000e-120 442
3 TraesCS5A01G308700 chr5D 79.620 368 42 8 889 1249 111156832 111156491 3.080000e-57 233
4 TraesCS5A01G308700 chr5D 92.208 154 12 0 1 154 409989890 409989737 8.620000e-53 219
5 TraesCS5A01G308700 chr5D 93.269 104 7 0 1274 1377 111156417 111156314 2.470000e-33 154
6 TraesCS5A01G308700 chr5D 91.509 106 8 1 527 632 409943807 409943703 1.480000e-30 145
7 TraesCS5A01G308700 chr5B 89.779 3258 241 44 1920 5115 491586870 491583643 0.000000e+00 4087
8 TraesCS5A01G308700 chr5B 85.621 459 39 11 1260 1706 491587673 491587230 1.680000e-124 457
9 TraesCS5A01G308700 chr5B 79.810 525 46 27 679 1168 491588288 491587789 1.370000e-85 327
10 TraesCS5A01G308700 chr6A 85.746 449 43 12 1260 1701 607599634 607600068 6.040000e-124 455
11 TraesCS5A01G308700 chr6A 82.243 321 50 6 1968 2286 607600139 607600454 2.350000e-68 270
12 TraesCS5A01G308700 chr2A 85.491 448 46 9 1260 1701 60828625 60829059 2.810000e-122 449
13 TraesCS5A01G308700 chr2A 85.078 449 46 11 1260 1701 485134907 485135341 6.080000e-119 438
14 TraesCS5A01G308700 chr2A 82.555 321 48 7 1968 2286 60829130 60829444 5.040000e-70 276
15 TraesCS5A01G308700 chr2A 90.270 185 14 2 4501 4682 739439862 739439679 6.620000e-59 239
16 TraesCS5A01G308700 chr3A 85.078 449 46 11 1260 1701 172049863 172050297 6.080000e-119 438
17 TraesCS5A01G308700 chr4A 84.667 450 46 13 1260 1701 567132208 567132642 1.320000e-115 427
18 TraesCS5A01G308700 chr4B 92.233 103 8 0 1275 1377 545862803 545862701 4.130000e-31 147
19 TraesCS5A01G308700 chrUn 90.385 104 9 1 1274 1377 257132561 257132663 8.930000e-28 135
20 TraesCS5A01G308700 chrUn 90.385 104 9 1 1274 1377 266760324 266760426 8.930000e-28 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G308700 chr5A 521022245 521027359 5114 True 9446.000000 9446 100.0000 1 5115 1 chr5A.!!$R1 5114
1 TraesCS5A01G308700 chr5D 409939134 409943807 4673 True 2562.000000 4979 89.2570 527 5115 2 chr5D.!!$R2 4588
2 TraesCS5A01G308700 chr5D 409987661 409989890 2229 True 330.500000 442 91.2655 1 486 2 chr5D.!!$R3 485
3 TraesCS5A01G308700 chr5B 491583643 491588288 4645 True 1623.666667 4087 85.0700 679 5115 3 chr5B.!!$R1 4436
4 TraesCS5A01G308700 chr6A 607599634 607600454 820 False 362.500000 455 83.9945 1260 2286 2 chr6A.!!$F1 1026
5 TraesCS5A01G308700 chr2A 60828625 60829444 819 False 362.500000 449 84.0230 1260 2286 2 chr2A.!!$F2 1026

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
933 2751 0.106669 ATCCCCTCGATCTGACGTCA 60.107 55.0 18.88 18.88 34.70 4.35 F
934 2752 0.106669 TCCCCTCGATCTGACGTCAT 60.107 55.0 20.40 4.74 34.70 3.06 F
1429 3307 0.108804 TGCAGTACTTGGCGAGTAGC 60.109 55.0 14.95 15.39 41.41 3.58 F
2564 4644 0.172803 ACTATGCGACGTTCCTGACC 59.827 55.0 0.00 0.00 0.00 4.02 F
3327 5409 0.178903 TGTGTACTCCTCCAAGGCCT 60.179 55.0 0.00 0.00 34.61 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2921 5001 0.394899 GTGGAGGGAGAAATGGCTGG 60.395 60.000 0.00 0.00 0.00 4.85 R
3097 5177 2.775890 CCTTCACATCAGCTGACTTGT 58.224 47.619 20.97 17.88 0.00 3.16 R
3311 5391 1.414550 GATGAGGCCTTGGAGGAGTAC 59.585 57.143 6.77 0.00 37.67 2.73 R
3846 5945 0.035458 GACCCTGGTGTCTCACTTGG 59.965 60.000 0.00 3.19 34.40 3.61 R
4927 7088 0.168128 GTGCTTAGTTTGCGGCGAAT 59.832 50.000 12.98 0.00 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.157870 CGAGCAACACAGGTTTCCGT 61.158 55.000 0.00 0.00 34.21 4.69
25 26 1.433837 AACACAGGTTTCCGTGACGC 61.434 55.000 0.00 0.00 31.83 5.19
150 151 0.955919 CCTCGTGGCTTGAAGGTTCC 60.956 60.000 0.00 0.00 0.00 3.62
154 155 0.467290 GTGGCTTGAAGGTTCCACCA 60.467 55.000 8.69 0.00 41.95 4.17
155 156 0.482446 TGGCTTGAAGGTTCCACCAT 59.518 50.000 0.00 0.00 41.95 3.55
157 158 2.092323 GGCTTGAAGGTTCCACCATAC 58.908 52.381 0.00 0.00 41.95 2.39
159 160 2.614481 GCTTGAAGGTTCCACCATACGA 60.614 50.000 0.00 0.00 41.95 3.43
160 161 3.262420 CTTGAAGGTTCCACCATACGAG 58.738 50.000 0.00 0.00 41.95 4.18
162 163 3.104512 TGAAGGTTCCACCATACGAGAT 58.895 45.455 0.00 0.00 41.95 2.75
163 164 3.132289 TGAAGGTTCCACCATACGAGATC 59.868 47.826 0.00 0.00 41.95 2.75
164 165 2.040178 AGGTTCCACCATACGAGATCC 58.960 52.381 0.00 0.00 41.95 3.36
165 166 1.269621 GGTTCCACCATACGAGATCCG 60.270 57.143 0.00 2.55 40.48 4.18
166 167 1.679680 GTTCCACCATACGAGATCCGA 59.320 52.381 10.05 0.00 41.76 4.55
167 168 1.605753 TCCACCATACGAGATCCGAG 58.394 55.000 10.05 0.00 41.76 4.63
169 170 0.955178 CACCATACGAGATCCGAGCT 59.045 55.000 10.05 0.00 41.76 4.09
170 171 0.955178 ACCATACGAGATCCGAGCTG 59.045 55.000 10.05 4.90 41.76 4.24
177 1920 2.956964 GATCCGAGCTGAACGCCG 60.957 66.667 0.00 0.00 40.39 6.46
213 1956 1.070134 TCACAAAGGTGGAGTTCCTCG 59.930 52.381 0.00 0.00 45.32 4.63
216 1959 0.321996 AAAGGTGGAGTTCCTCGCTC 59.678 55.000 0.00 0.00 36.82 5.03
220 1963 1.002502 TGGAGTTCCTCGCTCTCGA 60.003 57.895 0.00 0.00 43.28 4.04
270 2013 0.607217 TGAAGACCGCCTAGTCGTGA 60.607 55.000 0.00 0.00 41.83 4.35
302 2045 1.727511 CCCATGCGAATGATGCGGTT 61.728 55.000 4.44 0.00 34.24 4.44
314 2057 1.337071 GATGCGGTTCCTATGACGAGA 59.663 52.381 0.00 0.00 0.00 4.04
334 2077 4.776322 CGCCGAGGCCAATCCACA 62.776 66.667 5.01 0.00 37.98 4.17
394 2140 1.953686 CGAGGATCTCAAGGAGAGGAC 59.046 57.143 2.13 0.00 42.26 3.85
403 2149 3.431415 TCAAGGAGAGGACGATCAAGAA 58.569 45.455 0.00 0.00 0.00 2.52
418 2164 0.610687 AAGAAAGAGGACGAGGCAGG 59.389 55.000 0.00 0.00 0.00 4.85
419 2165 0.543174 AGAAAGAGGACGAGGCAGGT 60.543 55.000 0.00 0.00 0.00 4.00
420 2166 0.108567 GAAAGAGGACGAGGCAGGTC 60.109 60.000 0.00 0.00 0.00 3.85
424 2170 2.043248 GGACGAGGCAGGTCCCTA 60.043 66.667 14.11 0.00 46.65 3.53
425 2171 1.457831 GGACGAGGCAGGTCCCTAT 60.458 63.158 14.11 0.00 46.65 2.57
446 2192 1.414550 GGGGTGATCAAGCTAGAGTCC 59.585 57.143 0.00 0.00 0.00 3.85
452 2198 4.022416 GTGATCAAGCTAGAGTCCGATGAT 60.022 45.833 0.00 0.00 0.00 2.45
453 2199 4.586421 TGATCAAGCTAGAGTCCGATGATT 59.414 41.667 0.00 0.00 0.00 2.57
454 2200 4.313277 TCAAGCTAGAGTCCGATGATTG 57.687 45.455 0.00 0.00 0.00 2.67
455 2201 3.954258 TCAAGCTAGAGTCCGATGATTGA 59.046 43.478 0.00 0.00 0.00 2.57
456 2202 4.586421 TCAAGCTAGAGTCCGATGATTGAT 59.414 41.667 0.00 0.00 0.00 2.57
457 2203 4.517952 AGCTAGAGTCCGATGATTGATG 57.482 45.455 0.00 0.00 0.00 3.07
464 2210 4.437239 AGTCCGATGATTGATGTTGAGTC 58.563 43.478 0.00 0.00 0.00 3.36
465 2211 3.557595 GTCCGATGATTGATGTTGAGTCC 59.442 47.826 0.00 0.00 0.00 3.85
486 2232 5.354234 GTCCGATGTTATTGAACTGGACAAT 59.646 40.000 15.91 0.00 44.13 2.71
487 2233 5.584649 TCCGATGTTATTGAACTGGACAATC 59.415 40.000 0.00 0.00 38.61 2.67
488 2234 5.353956 CCGATGTTATTGAACTGGACAATCA 59.646 40.000 0.00 0.00 38.61 2.57
489 2235 6.457392 CCGATGTTATTGAACTGGACAATCAG 60.457 42.308 0.00 0.00 38.61 2.90
490 2236 5.627499 TGTTATTGAACTGGACAATCAGC 57.373 39.130 0.00 0.00 38.61 4.26
491 2237 5.069318 TGTTATTGAACTGGACAATCAGCA 58.931 37.500 0.00 0.00 38.61 4.41
492 2238 5.181811 TGTTATTGAACTGGACAATCAGCAG 59.818 40.000 0.00 0.00 38.61 4.24
493 2239 2.936919 TGAACTGGACAATCAGCAGT 57.063 45.000 0.00 0.00 38.26 4.40
494 2240 3.213206 TGAACTGGACAATCAGCAGTT 57.787 42.857 0.00 0.00 38.26 3.16
495 2241 3.554934 TGAACTGGACAATCAGCAGTTT 58.445 40.909 0.00 0.00 38.26 2.66
496 2242 3.316029 TGAACTGGACAATCAGCAGTTTG 59.684 43.478 0.00 0.00 38.26 2.93
497 2243 3.213206 ACTGGACAATCAGCAGTTTGA 57.787 42.857 6.89 0.00 38.26 2.69
498 2244 3.554934 ACTGGACAATCAGCAGTTTGAA 58.445 40.909 6.89 0.00 38.26 2.69
499 2245 3.953612 ACTGGACAATCAGCAGTTTGAAA 59.046 39.130 6.89 0.00 38.26 2.69
500 2246 4.402155 ACTGGACAATCAGCAGTTTGAAAA 59.598 37.500 6.89 0.00 38.26 2.29
501 2247 5.069516 ACTGGACAATCAGCAGTTTGAAAAT 59.930 36.000 6.89 0.00 38.26 1.82
502 2248 5.291178 TGGACAATCAGCAGTTTGAAAATG 58.709 37.500 0.37 0.37 0.00 2.32
503 2249 5.068855 TGGACAATCAGCAGTTTGAAAATGA 59.931 36.000 9.77 0.00 0.00 2.57
504 2250 5.403466 GGACAATCAGCAGTTTGAAAATGAC 59.597 40.000 9.77 0.95 0.00 3.06
505 2251 4.977963 ACAATCAGCAGTTTGAAAATGACG 59.022 37.500 9.77 0.00 0.00 4.35
506 2252 5.214417 CAATCAGCAGTTTGAAAATGACGA 58.786 37.500 9.77 4.73 0.00 4.20
507 2253 4.891627 TCAGCAGTTTGAAAATGACGAA 57.108 36.364 9.77 0.00 0.00 3.85
508 2254 5.242069 TCAGCAGTTTGAAAATGACGAAA 57.758 34.783 9.77 0.00 0.00 3.46
509 2255 5.645624 TCAGCAGTTTGAAAATGACGAAAA 58.354 33.333 9.77 0.00 0.00 2.29
510 2256 6.272318 TCAGCAGTTTGAAAATGACGAAAAT 58.728 32.000 9.77 0.00 0.00 1.82
511 2257 7.421599 TCAGCAGTTTGAAAATGACGAAAATA 58.578 30.769 9.77 0.00 0.00 1.40
512 2258 8.081633 TCAGCAGTTTGAAAATGACGAAAATAT 58.918 29.630 9.77 0.00 0.00 1.28
513 2259 8.157813 CAGCAGTTTGAAAATGACGAAAATATG 58.842 33.333 9.77 0.00 0.00 1.78
514 2260 6.949877 GCAGTTTGAAAATGACGAAAATATGC 59.050 34.615 9.77 0.00 0.00 3.14
515 2261 7.359097 GCAGTTTGAAAATGACGAAAATATGCA 60.359 33.333 9.77 0.00 31.26 3.96
516 2262 8.486383 CAGTTTGAAAATGACGAAAATATGCAA 58.514 29.630 0.00 0.00 0.00 4.08
517 2263 9.206870 AGTTTGAAAATGACGAAAATATGCAAT 57.793 25.926 0.00 0.00 0.00 3.56
518 2264 9.464248 GTTTGAAAATGACGAAAATATGCAATC 57.536 29.630 0.00 0.00 0.00 2.67
519 2265 8.754230 TTGAAAATGACGAAAATATGCAATCA 57.246 26.923 0.00 0.00 0.00 2.57
520 2266 8.929827 TGAAAATGACGAAAATATGCAATCAT 57.070 26.923 0.00 0.00 36.73 2.45
521 2267 8.809478 TGAAAATGACGAAAATATGCAATCATG 58.191 29.630 0.00 0.00 34.22 3.07
522 2268 8.706492 AAAATGACGAAAATATGCAATCATGT 57.294 26.923 0.00 0.00 34.22 3.21
523 2269 8.706492 AAATGACGAAAATATGCAATCATGTT 57.294 26.923 0.00 0.00 35.86 2.71
524 2270 8.706492 AATGACGAAAATATGCAATCATGTTT 57.294 26.923 0.00 0.00 43.07 2.83
525 2271 9.800433 AATGACGAAAATATGCAATCATGTTTA 57.200 25.926 0.00 0.00 41.26 2.01
544 2290 5.587043 TGTTTATTTGGTGCCCTATTAGACG 59.413 40.000 0.00 0.00 0.00 4.18
559 2305 1.138883 GACGTCATCTGCTACGGCA 59.861 57.895 11.55 0.00 46.41 5.69
621 2367 4.709886 GGTAGAACATTTGGTGCCCTAAAT 59.290 41.667 0.00 0.00 0.00 1.40
625 2371 5.185828 AGAACATTTGGTGCCCTAAATTCTC 59.814 40.000 9.86 2.48 29.35 2.87
642 2425 6.528537 AATTCTCTCTCTATCATCCGATGG 57.471 41.667 8.54 0.00 32.73 3.51
672 2455 2.867472 GGTGCGAATGAACCACCG 59.133 61.111 0.00 0.00 44.22 4.94
687 2472 0.453390 CACCGTAGTCCCCGAGTAAC 59.547 60.000 0.00 0.00 0.00 2.50
714 2502 1.403679 GCTCTCTCAGCTACATCACGT 59.596 52.381 0.00 0.00 45.83 4.49
762 2550 1.007038 GCGGGTTACTGACGTGACA 60.007 57.895 0.00 0.00 31.74 3.58
763 2551 1.280206 GCGGGTTACTGACGTGACAC 61.280 60.000 0.00 0.00 31.74 3.67
766 2559 1.665161 GGGTTACTGACGTGACACGAG 60.665 57.143 33.12 22.53 46.05 4.18
767 2560 1.665161 GGTTACTGACGTGACACGAGG 60.665 57.143 33.12 22.04 46.05 4.63
768 2561 1.002033 GTTACTGACGTGACACGAGGT 60.002 52.381 33.12 25.67 46.05 3.85
770 2563 1.371758 CTGACGTGACACGAGGTGG 60.372 63.158 33.12 14.14 46.05 4.61
771 2564 2.071844 CTGACGTGACACGAGGTGGT 62.072 60.000 33.12 10.69 46.05 4.16
773 2566 2.067091 GACGTGACACGAGGTGGTGA 62.067 60.000 33.12 0.00 46.05 4.02
774 2567 1.289066 CGTGACACGAGGTGGTGAT 59.711 57.895 23.39 0.00 46.05 3.06
775 2568 1.008875 CGTGACACGAGGTGGTGATG 61.009 60.000 23.39 0.00 46.05 3.07
785 2578 3.633418 GAGGTGGTGATGTACTACTCCT 58.367 50.000 0.00 4.06 40.33 3.69
786 2579 4.685302 CGAGGTGGTGATGTACTACTCCTA 60.685 50.000 0.00 0.00 40.33 2.94
787 2580 4.534797 AGGTGGTGATGTACTACTCCTAC 58.465 47.826 0.00 1.29 40.33 3.18
788 2581 3.635836 GGTGGTGATGTACTACTCCTACC 59.364 52.174 0.00 5.87 40.33 3.18
789 2582 3.635836 GTGGTGATGTACTACTCCTACCC 59.364 52.174 0.00 0.00 37.74 3.69
811 2604 1.231221 CTATCTCCACGCTACTCGCT 58.769 55.000 0.00 0.00 43.23 4.93
824 2617 4.270084 CGCTACTCGCTTAAATCCAAATCA 59.730 41.667 0.00 0.00 36.13 2.57
829 2622 5.355350 ACTCGCTTAAATCCAAATCAGAAGG 59.645 40.000 0.00 0.00 0.00 3.46
830 2623 4.096382 TCGCTTAAATCCAAATCAGAAGGC 59.904 41.667 0.00 0.00 0.00 4.35
858 2655 5.998454 TCCGCAGTCAGTAGTAGTATAAC 57.002 43.478 0.00 0.00 0.00 1.89
866 2684 9.043079 CAGTCAGTAGTAGTATAACGATCTTCA 57.957 37.037 0.00 0.00 0.00 3.02
886 2704 1.966451 GTCCCTGTCCCAAACTGCG 60.966 63.158 0.00 0.00 0.00 5.18
887 2705 2.672996 CCCTGTCCCAAACTGCGG 60.673 66.667 0.00 0.00 0.00 5.69
888 2706 3.365265 CCTGTCCCAAACTGCGGC 61.365 66.667 0.00 0.00 0.00 6.53
889 2707 3.365265 CTGTCCCAAACTGCGGCC 61.365 66.667 0.00 0.00 0.00 6.13
890 2708 4.196778 TGTCCCAAACTGCGGCCA 62.197 61.111 2.24 0.00 0.00 5.36
906 2724 4.514577 CAATCTCCGGCGCCGTCT 62.515 66.667 43.12 23.77 37.81 4.18
918 2736 2.503382 GCCGTCTCCTCTCCATCCC 61.503 68.421 0.00 0.00 0.00 3.85
922 2740 0.825840 GTCTCCTCTCCATCCCCTCG 60.826 65.000 0.00 0.00 0.00 4.63
933 2751 0.106669 ATCCCCTCGATCTGACGTCA 60.107 55.000 18.88 18.88 34.70 4.35
934 2752 0.106669 TCCCCTCGATCTGACGTCAT 60.107 55.000 20.40 4.74 34.70 3.06
935 2753 0.312416 CCCCTCGATCTGACGTCATC 59.688 60.000 20.40 13.82 34.70 2.92
936 2754 0.312416 CCCTCGATCTGACGTCATCC 59.688 60.000 20.40 10.04 34.70 3.51
937 2755 1.313772 CCTCGATCTGACGTCATCCT 58.686 55.000 20.40 6.53 34.70 3.24
938 2756 1.001924 CCTCGATCTGACGTCATCCTG 60.002 57.143 20.40 7.50 34.70 3.86
939 2757 0.382158 TCGATCTGACGTCATCCTGC 59.618 55.000 20.40 6.36 34.70 4.85
940 2758 0.383590 CGATCTGACGTCATCCTGCT 59.616 55.000 20.40 0.00 0.00 4.24
941 2759 1.599171 CGATCTGACGTCATCCTGCTC 60.599 57.143 20.40 7.46 0.00 4.26
942 2760 0.749649 ATCTGACGTCATCCTGCTCC 59.250 55.000 20.40 0.00 0.00 4.70
945 2763 1.064946 GACGTCATCCTGCTCCGAG 59.935 63.158 11.55 0.00 0.00 4.63
959 2777 0.832135 TCCGAGCTCTGAAACCCACT 60.832 55.000 12.85 0.00 0.00 4.00
966 2784 2.213499 CTCTGAAACCCACTCACACAC 58.787 52.381 0.00 0.00 0.00 3.82
986 2804 2.062448 AACCTGAACCCTCTCCCCCT 62.062 60.000 0.00 0.00 0.00 4.79
987 2805 1.690985 CCTGAACCCTCTCCCCCTC 60.691 68.421 0.00 0.00 0.00 4.30
994 2817 2.769120 CCTCTCCCCCTCCTCGCTA 61.769 68.421 0.00 0.00 0.00 4.26
1144 2982 2.808958 CGCGCGTTTCATGGGGTAG 61.809 63.158 24.19 0.00 0.00 3.18
1149 2987 1.029947 CGTTTCATGGGGTAGGTGCC 61.030 60.000 0.00 0.00 0.00 5.01
1164 3002 4.372999 GCCCTGGGCCAGAGCTTT 62.373 66.667 34.84 0.00 44.06 3.51
1168 3006 1.305623 CTGGGCCAGAGCTTTCCAT 59.694 57.895 29.96 0.00 39.73 3.41
1169 3007 1.000521 TGGGCCAGAGCTTTCCATG 60.001 57.895 0.00 0.00 39.73 3.66
1170 3008 2.421399 GGGCCAGAGCTTTCCATGC 61.421 63.158 4.39 0.00 39.73 4.06
1180 3028 2.017049 GCTTTCCATGCCGTGTAGATT 58.983 47.619 0.00 0.00 0.00 2.40
1181 3029 2.223340 GCTTTCCATGCCGTGTAGATTG 60.223 50.000 0.00 0.00 0.00 2.67
1193 3041 2.492484 GTGTAGATTGGTGGAGTCTCGT 59.508 50.000 0.00 0.00 0.00 4.18
1195 3043 1.633774 AGATTGGTGGAGTCTCGTGT 58.366 50.000 0.00 0.00 0.00 4.49
1196 3044 2.803956 AGATTGGTGGAGTCTCGTGTA 58.196 47.619 0.00 0.00 0.00 2.90
1197 3045 2.492484 AGATTGGTGGAGTCTCGTGTAC 59.508 50.000 0.00 0.00 0.00 2.90
1198 3046 0.594602 TTGGTGGAGTCTCGTGTACG 59.405 55.000 0.00 0.00 41.45 3.67
1216 3064 2.595750 CGATAGTCTGGAGATCCCCT 57.404 55.000 0.00 0.00 34.29 4.79
1258 3136 4.808414 TCAGAGATTCTTGGTGGTACTG 57.192 45.455 0.00 0.00 0.00 2.74
1263 3141 5.046950 AGAGATTCTTGGTGGTACTGACTTC 60.047 44.000 0.00 0.00 0.00 3.01
1350 3228 3.837570 AAGGCCGGTGGTTCGTTCC 62.838 63.158 1.90 0.00 0.00 3.62
1393 3271 1.882989 GCTGCGTCACCTTCTCCTCT 61.883 60.000 0.00 0.00 0.00 3.69
1394 3272 0.108898 CTGCGTCACCTTCTCCTCTG 60.109 60.000 0.00 0.00 0.00 3.35
1418 3296 1.065854 GTGCCCTTCTGATGCAGTACT 60.066 52.381 0.00 0.00 35.33 2.73
1425 3303 1.134995 TCTGATGCAGTACTTGGCGAG 60.135 52.381 0.00 0.00 32.61 5.03
1426 3304 0.608130 TGATGCAGTACTTGGCGAGT 59.392 50.000 12.92 12.92 42.55 4.18
1429 3307 0.108804 TGCAGTACTTGGCGAGTAGC 60.109 55.000 14.95 15.39 41.41 3.58
1468 3349 9.726438 AGTACACTTTTGTTTCTAGCAGAATAT 57.274 29.630 0.00 0.00 37.15 1.28
1505 3391 1.975407 GTGGCTGCCTGCTTCATGT 60.975 57.895 21.03 0.00 42.39 3.21
1506 3392 1.228644 TGGCTGCCTGCTTCATGTT 60.229 52.632 21.03 0.00 42.39 2.71
1507 3393 0.828762 TGGCTGCCTGCTTCATGTTT 60.829 50.000 21.03 0.00 42.39 2.83
1508 3394 1.176527 GGCTGCCTGCTTCATGTTTA 58.823 50.000 12.43 0.00 42.39 2.01
1509 3395 1.545582 GGCTGCCTGCTTCATGTTTAA 59.454 47.619 12.43 0.00 42.39 1.52
1510 3396 2.599659 GCTGCCTGCTTCATGTTTAAC 58.400 47.619 0.00 0.00 38.95 2.01
1511 3397 2.030007 GCTGCCTGCTTCATGTTTAACA 60.030 45.455 0.00 0.00 38.95 2.41
1512 3398 3.829948 CTGCCTGCTTCATGTTTAACAG 58.170 45.455 3.63 0.00 0.00 3.16
1513 3399 3.221771 TGCCTGCTTCATGTTTAACAGT 58.778 40.909 3.63 0.00 0.00 3.55
1572 3458 7.242783 GCAGAGTTGATTTTCTCAAGATTCTC 58.757 38.462 0.00 0.00 44.44 2.87
1679 3566 1.181098 ACCAGGTTGTCTTGCCATGC 61.181 55.000 0.00 0.00 0.00 4.06
1688 3575 0.890542 TCTTGCCATGCTTTCGCTGT 60.891 50.000 0.00 0.00 36.97 4.40
1694 3581 1.334054 CATGCTTTCGCTGTTTGCTC 58.666 50.000 0.00 0.00 40.11 4.26
1706 3593 3.688673 GCTGTTTGCTCTGATTTAGCTCT 59.311 43.478 0.00 0.00 40.73 4.09
1708 3595 4.645535 TGTTTGCTCTGATTTAGCTCTGT 58.354 39.130 0.00 0.00 40.73 3.41
1731 3629 1.546548 GCTTTCTCCCAAAGACCAGCT 60.547 52.381 0.00 0.00 37.49 4.24
1738 3636 3.686016 TCCCAAAGACCAGCTCAATTAC 58.314 45.455 0.00 0.00 0.00 1.89
1739 3637 2.420022 CCCAAAGACCAGCTCAATTACG 59.580 50.000 0.00 0.00 0.00 3.18
1740 3638 2.159517 CCAAAGACCAGCTCAATTACGC 60.160 50.000 0.00 0.00 0.00 4.42
1741 3639 2.744202 CAAAGACCAGCTCAATTACGCT 59.256 45.455 0.00 0.00 36.83 5.07
1744 3642 3.412386 AGACCAGCTCAATTACGCTTTT 58.588 40.909 0.00 0.00 33.45 2.27
1746 3644 5.001232 AGACCAGCTCAATTACGCTTTTTA 58.999 37.500 0.00 0.00 33.45 1.52
1752 3650 6.955963 CAGCTCAATTACGCTTTTTACACTAG 59.044 38.462 0.00 0.00 33.45 2.57
1767 3665 7.504924 TTTACACTAGTTTGAATTCACTGGG 57.495 36.000 7.89 3.96 0.00 4.45
1770 3668 5.995897 ACACTAGTTTGAATTCACTGGGTAC 59.004 40.000 7.89 0.40 0.00 3.34
1781 3679 3.935993 CTGGGTACAGTGAACAGGG 57.064 57.895 0.00 0.00 39.92 4.45
1783 3681 1.909302 CTGGGTACAGTGAACAGGGAT 59.091 52.381 0.00 0.00 39.92 3.85
1785 3683 3.711704 CTGGGTACAGTGAACAGGGATAT 59.288 47.826 0.00 0.00 39.92 1.63
1786 3684 3.454447 TGGGTACAGTGAACAGGGATATG 59.546 47.826 0.00 0.00 0.00 1.78
1787 3685 3.709653 GGGTACAGTGAACAGGGATATGA 59.290 47.826 0.00 0.00 0.00 2.15
1788 3686 4.443034 GGGTACAGTGAACAGGGATATGAC 60.443 50.000 0.00 0.00 0.00 3.06
1790 3688 3.096852 ACAGTGAACAGGGATATGACGA 58.903 45.455 0.00 0.00 0.00 4.20
1791 3689 3.513912 ACAGTGAACAGGGATATGACGAA 59.486 43.478 0.00 0.00 0.00 3.85
1792 3690 4.162320 ACAGTGAACAGGGATATGACGAAT 59.838 41.667 0.00 0.00 0.00 3.34
1795 3698 5.104941 AGTGAACAGGGATATGACGAATTGA 60.105 40.000 0.00 0.00 0.00 2.57
1801 3704 3.679980 GGGATATGACGAATTGACGATGG 59.320 47.826 0.00 0.00 37.03 3.51
1812 3715 6.315144 ACGAATTGACGATGGATAAATGTTCA 59.685 34.615 0.00 0.00 37.03 3.18
1815 3718 9.520204 GAATTGACGATGGATAAATGTTCAATT 57.480 29.630 6.04 6.04 36.96 2.32
1816 3719 8.861033 ATTGACGATGGATAAATGTTCAATTG 57.139 30.769 0.00 0.00 0.00 2.32
1845 3748 8.696374 TCAATTAAGTTAGAGAGATGGTACCTG 58.304 37.037 14.36 0.00 0.00 4.00
1847 3750 8.611051 ATTAAGTTAGAGAGATGGTACCTGTT 57.389 34.615 14.36 0.00 0.00 3.16
1866 3769 5.710099 CCTGTTGAGGTATTAGGAAAGCAAA 59.290 40.000 0.00 0.00 34.16 3.68
1869 3772 6.016610 TGTTGAGGTATTAGGAAAGCAAACAC 60.017 38.462 0.00 0.00 0.00 3.32
1874 3777 7.962441 AGGTATTAGGAAAGCAAACACAAATT 58.038 30.769 0.00 0.00 0.00 1.82
1875 3778 9.084533 AGGTATTAGGAAAGCAAACACAAATTA 57.915 29.630 0.00 0.00 0.00 1.40
1887 3790 8.868916 AGCAAACACAAATTAAAGTACAGTTTG 58.131 29.630 0.00 0.00 43.47 2.93
1891 3794 5.401079 CACAAATTAAAGTACAGTTTGGGCG 59.599 40.000 0.00 0.00 34.87 6.13
1892 3795 5.068067 ACAAATTAAAGTACAGTTTGGGCGT 59.932 36.000 0.00 0.00 34.87 5.68
1893 3796 4.759516 ATTAAAGTACAGTTTGGGCGTG 57.240 40.909 0.00 0.00 0.00 5.34
1898 3801 1.877443 GTACAGTTTGGGCGTGTTCAT 59.123 47.619 0.00 0.00 0.00 2.57
1935 3999 6.774673 TGATACCATACTTGTGAAGGAACAA 58.225 36.000 0.00 0.00 37.71 2.83
1945 4009 6.445357 TTGTGAAGGAACAAGGAAAACTAC 57.555 37.500 0.00 0.00 35.16 2.73
1946 4010 5.502079 TGTGAAGGAACAAGGAAAACTACA 58.498 37.500 0.00 0.00 0.00 2.74
1947 4011 5.946972 TGTGAAGGAACAAGGAAAACTACAA 59.053 36.000 0.00 0.00 0.00 2.41
1950 4014 7.979537 GTGAAGGAACAAGGAAAACTACAATTT 59.020 33.333 0.00 0.00 0.00 1.82
2013 4090 9.655769 CAATCTAATAAATCAAATGACTCACCG 57.344 33.333 0.00 0.00 0.00 4.94
2019 4096 3.328382 TCAAATGACTCACCGGGTAAG 57.672 47.619 6.32 0.00 0.00 2.34
2020 4097 2.027561 TCAAATGACTCACCGGGTAAGG 60.028 50.000 6.32 0.00 37.30 2.69
2022 4099 1.623542 ATGACTCACCGGGTAAGGCC 61.624 60.000 6.32 0.00 33.69 5.19
2030 4107 1.078426 CGGGTAAGGCCAGTCAAGG 60.078 63.158 5.01 0.00 39.65 3.61
2031 4108 1.303282 GGGTAAGGCCAGTCAAGGG 59.697 63.158 5.01 0.00 39.65 3.95
2035 4112 0.984230 TAAGGCCAGTCAAGGGACAG 59.016 55.000 5.01 0.00 46.80 3.51
2069 4147 5.220854 CCACAAGTACAACTGAAAACTCCAG 60.221 44.000 0.00 0.00 37.64 3.86
2077 4155 4.170468 ACTGAAAACTCCAGGAACATGT 57.830 40.909 0.00 0.00 36.03 3.21
2085 4164 3.139397 ACTCCAGGAACATGTAAACCCAA 59.861 43.478 0.00 0.00 0.00 4.12
2086 4165 3.492337 TCCAGGAACATGTAAACCCAAC 58.508 45.455 0.00 0.00 0.00 3.77
2106 4185 5.047802 CCAACCATTCAGTAGCTCAAAACAT 60.048 40.000 0.00 0.00 0.00 2.71
2110 4189 6.183360 ACCATTCAGTAGCTCAAAACATATGC 60.183 38.462 1.58 0.00 0.00 3.14
2113 4192 5.733676 TCAGTAGCTCAAAACATATGCTGA 58.266 37.500 1.58 2.79 35.47 4.26
2139 4219 7.520451 AGCATGCTTGATGTAATACAATCAT 57.480 32.000 16.30 0.00 34.61 2.45
2152 4232 9.660180 TGTAATACAATCATTGTTGTGCTAGTA 57.340 29.630 8.69 0.00 42.22 1.82
2154 4234 8.792830 AATACAATCATTGTTGTGCTAGTACT 57.207 30.769 8.69 0.00 42.22 2.73
2155 4235 9.884636 AATACAATCATTGTTGTGCTAGTACTA 57.115 29.630 8.69 1.89 42.22 1.82
2156 4236 9.884636 ATACAATCATTGTTGTGCTAGTACTAA 57.115 29.630 8.69 5.60 42.22 2.24
2157 4237 8.256611 ACAATCATTGTTGTGCTAGTACTAAG 57.743 34.615 12.42 0.00 42.22 2.18
2158 4238 7.334421 ACAATCATTGTTGTGCTAGTACTAAGG 59.666 37.037 12.42 6.94 42.22 2.69
2160 4240 3.604875 TGTTGTGCTAGTACTAAGGGC 57.395 47.619 12.42 4.94 0.00 5.19
2162 4242 4.346730 TGTTGTGCTAGTACTAAGGGCTA 58.653 43.478 12.42 1.76 0.00 3.93
2163 4243 4.159135 TGTTGTGCTAGTACTAAGGGCTAC 59.841 45.833 12.42 9.65 0.00 3.58
2166 4246 5.759059 TGTGCTAGTACTAAGGGCTACTTA 58.241 41.667 12.42 2.33 40.64 2.24
2172 4252 7.652507 GCTAGTACTAAGGGCTACTTACATTTG 59.347 40.741 3.76 0.00 40.64 2.32
2174 4254 7.328737 AGTACTAAGGGCTACTTACATTTGTG 58.671 38.462 0.00 0.00 40.64 3.33
2181 4261 5.007724 GGGCTACTTACATTTGTGTATGAGC 59.992 44.000 8.03 10.50 0.00 4.26
2265 4345 3.064207 TGTAGGTGTCAATTCAAGCGTC 58.936 45.455 0.00 0.00 0.00 5.19
2297 4377 3.959535 TGAAGCAATAAAAAGGCCAGG 57.040 42.857 5.01 0.00 0.00 4.45
2355 4435 4.344104 CCAAGCCTTTCTTTGGATTCCTA 58.656 43.478 3.95 0.00 29.94 2.94
2481 4561 2.609737 CGTAGTGAAGTGAACCCTGACC 60.610 54.545 0.00 0.00 0.00 4.02
2504 4584 2.224548 GGACTTGTTTCTAGGTGCTGGT 60.225 50.000 0.00 0.00 0.00 4.00
2552 4632 2.224079 AGCACAACTGTCAAACTATGCG 59.776 45.455 0.00 0.00 36.93 4.73
2564 4644 0.172803 ACTATGCGACGTTCCTGACC 59.827 55.000 0.00 0.00 0.00 4.02
2603 4683 3.249320 CCCTCAGCATTGTTATGACATCG 59.751 47.826 0.00 0.00 35.29 3.84
2604 4684 3.873361 CCTCAGCATTGTTATGACATCGT 59.127 43.478 0.00 0.00 35.29 3.73
2681 4761 4.261447 GGCAAGAAATTACCTGTTGACGTT 60.261 41.667 0.00 0.00 0.00 3.99
2823 4903 3.126831 GACACAGTCTATGCTATGTGCC 58.873 50.000 4.20 0.00 45.41 5.01
2846 4926 1.838112 TATCTTTTGCTGCCCACCTG 58.162 50.000 0.00 0.00 0.00 4.00
2863 4943 5.940470 CCCACCTGGAGTAAATATCTAATGC 59.060 44.000 0.00 0.00 37.39 3.56
2921 5001 2.482142 CCCAAGACTCTGTTCGGCTATC 60.482 54.545 0.00 0.00 0.00 2.08
3097 5177 1.771854 TCTTGCTGGTACTTGGTTCCA 59.228 47.619 0.00 0.00 32.33 3.53
3158 5238 7.823745 ATCTTTTGAGACAGGTATGTTGTTT 57.176 32.000 0.00 0.00 40.68 2.83
3189 5269 5.188327 TGGATTACGATTTGTTGTTTGCA 57.812 34.783 0.00 0.00 0.00 4.08
3311 5391 3.801638 GCCTCCAGCAGTATCAGTATGTG 60.802 52.174 0.00 0.00 42.97 3.21
3327 5409 0.178903 TGTGTACTCCTCCAAGGCCT 60.179 55.000 0.00 0.00 34.61 5.19
3468 5550 6.362551 CACGGTATCACGGAGTAATATCTTTG 59.637 42.308 0.00 0.00 41.61 2.77
3531 5613 6.640518 TCAGACGAAGCACTTCCTAAATATT 58.359 36.000 4.86 0.00 36.27 1.28
3532 5614 7.778083 TCAGACGAAGCACTTCCTAAATATTA 58.222 34.615 4.86 0.00 36.27 0.98
3533 5615 7.921214 TCAGACGAAGCACTTCCTAAATATTAG 59.079 37.037 4.86 0.00 36.27 1.73
3535 5617 8.258708 AGACGAAGCACTTCCTAAATATTAGTT 58.741 33.333 4.86 0.00 36.27 2.24
3536 5618 8.788325 ACGAAGCACTTCCTAAATATTAGTTT 57.212 30.769 4.86 0.00 36.27 2.66
3537 5619 9.880157 ACGAAGCACTTCCTAAATATTAGTTTA 57.120 29.630 4.86 0.00 36.27 2.01
3575 5661 2.163613 ACACTGCAATCACAGCATCATG 59.836 45.455 0.00 0.00 41.82 3.07
3587 5673 5.997129 TCACAGCATCATGACTTGTTTTCTA 59.003 36.000 0.00 0.00 0.00 2.10
3589 5675 6.745907 CACAGCATCATGACTTGTTTTCTATG 59.254 38.462 0.00 0.00 0.00 2.23
3657 5745 2.408050 CTCTGTGTGTAGGTTGTGCTC 58.592 52.381 0.00 0.00 0.00 4.26
3688 5776 0.603065 GGGGTTTGGTCTTGTCATGC 59.397 55.000 0.00 0.00 0.00 4.06
3715 5803 4.879545 GGTCCAAGAAAACACAAGTGTAGA 59.120 41.667 6.24 0.00 44.13 2.59
3717 5805 4.879545 TCCAAGAAAACACAAGTGTAGACC 59.120 41.667 6.24 0.00 44.13 3.85
3725 5813 1.134037 ACAAGTGTAGACCCCGCAAAA 60.134 47.619 0.00 0.00 0.00 2.44
3816 5915 2.076863 CCTTGGTGGAAAGATGACGAC 58.923 52.381 0.00 0.00 38.35 4.34
3830 5929 1.472878 TGACGACTGCAGACCATAGAC 59.527 52.381 23.35 2.64 0.00 2.59
3856 5957 1.589716 GGTGCCATGCCAAGTGAGAC 61.590 60.000 0.00 0.00 0.00 3.36
3917 6018 5.060427 TCTTTTCCTTTGATCCTTGGTGA 57.940 39.130 0.00 0.00 0.00 4.02
4004 6108 7.487829 CAGAAGATAGAAAGAGAGAAGAAACCG 59.512 40.741 0.00 0.00 0.00 4.44
4086 6191 2.526304 TAATATCCACTCGTGCTGCC 57.474 50.000 0.00 0.00 0.00 4.85
4109 6214 6.591448 GCCTATGCAGCTGTTTTTATTTTCTT 59.409 34.615 16.64 0.00 37.47 2.52
4110 6215 7.759433 GCCTATGCAGCTGTTTTTATTTTCTTA 59.241 33.333 16.64 0.00 37.47 2.10
4111 6216 9.807649 CCTATGCAGCTGTTTTTATTTTCTTAT 57.192 29.630 16.64 0.00 0.00 1.73
4152 6257 8.548877 ACTTGGATGATGATGATGATGATGATA 58.451 33.333 0.00 0.00 0.00 2.15
4153 6258 8.964476 TTGGATGATGATGATGATGATGATAG 57.036 34.615 0.00 0.00 0.00 2.08
4182 6290 4.870426 TCGGAGTACATCTCATTTTGCTTC 59.130 41.667 0.00 0.00 44.40 3.86
4264 6377 3.058914 ACACGTACGGTTACAGTACAGTC 60.059 47.826 21.06 0.03 43.24 3.51
4265 6378 2.157668 ACGTACGGTTACAGTACAGTCG 59.842 50.000 21.06 12.33 43.24 4.18
4279 6392 4.192000 GTCGCACTGACTGATGGG 57.808 61.111 0.00 0.00 44.58 4.00
4280 6393 1.293498 GTCGCACTGACTGATGGGT 59.707 57.895 0.00 0.00 44.58 4.51
4281 6394 0.737715 GTCGCACTGACTGATGGGTC 60.738 60.000 0.00 0.00 44.58 4.46
4282 6395 1.448540 CGCACTGACTGATGGGTCC 60.449 63.158 0.00 0.00 35.54 4.46
4283 6396 1.679311 GCACTGACTGATGGGTCCA 59.321 57.895 0.00 0.00 35.54 4.02
4284 6397 0.392193 GCACTGACTGATGGGTCCAG 60.392 60.000 0.00 0.00 35.54 3.86
4285 6398 0.979665 CACTGACTGATGGGTCCAGT 59.020 55.000 0.00 0.00 46.51 4.00
4286 6399 1.349026 CACTGACTGATGGGTCCAGTT 59.651 52.381 0.00 0.00 44.14 3.16
4287 6400 1.349026 ACTGACTGATGGGTCCAGTTG 59.651 52.381 0.00 0.00 44.14 3.16
4288 6401 1.349026 CTGACTGATGGGTCCAGTTGT 59.651 52.381 0.00 0.00 44.14 3.32
4289 6402 2.567169 CTGACTGATGGGTCCAGTTGTA 59.433 50.000 0.00 0.00 44.14 2.41
4682 6832 1.885049 TCTCTGAGGAGGGGAATTGG 58.115 55.000 4.59 0.00 39.86 3.16
4718 6868 4.101448 ATGGCGCTGGTCTGGGAC 62.101 66.667 7.64 0.00 0.00 4.46
4783 6933 2.092323 GGGGATGGTAAGTGCAAACTC 58.908 52.381 0.00 0.00 0.00 3.01
4784 6934 2.092323 GGGATGGTAAGTGCAAACTCC 58.908 52.381 0.00 0.00 0.00 3.85
4785 6935 1.737793 GGATGGTAAGTGCAAACTCCG 59.262 52.381 0.00 0.00 0.00 4.63
4786 6936 2.614481 GGATGGTAAGTGCAAACTCCGA 60.614 50.000 0.00 0.00 0.00 4.55
4787 6937 2.851263 TGGTAAGTGCAAACTCCGAT 57.149 45.000 0.00 0.00 0.00 4.18
4789 6939 3.857052 TGGTAAGTGCAAACTCCGATAG 58.143 45.455 0.00 0.00 0.00 2.08
4793 6943 4.744795 AAGTGCAAACTCCGATAGAGAT 57.255 40.909 0.00 0.00 46.50 2.75
4795 6945 6.412362 AAGTGCAAACTCCGATAGAGATAT 57.588 37.500 0.00 0.00 46.50 1.63
4798 6948 6.926272 AGTGCAAACTCCGATAGAGATATTTC 59.074 38.462 0.00 0.00 46.50 2.17
4803 6953 6.582677 ACTCCGATAGAGATATTTCTGGTG 57.417 41.667 6.03 3.10 46.50 4.17
4814 6964 7.071698 AGAGATATTTCTGGTGAAGAAGCCATA 59.928 37.037 0.00 0.00 45.64 2.74
4823 6973 4.578105 GGTGAAGAAGCCATATTCTGAAGG 59.422 45.833 0.00 0.00 39.47 3.46
4825 6975 5.882557 GTGAAGAAGCCATATTCTGAAGGAA 59.117 40.000 0.00 0.00 39.47 3.36
4830 6980 5.526506 AGCCATATTCTGAAGGAATTTGC 57.473 39.130 0.00 0.00 41.42 3.68
4833 6983 5.287226 CCATATTCTGAAGGAATTTGCTGC 58.713 41.667 0.00 0.00 41.42 5.25
4841 6991 5.129634 TGAAGGAATTTGCTGCGGATAATA 58.870 37.500 0.00 0.00 0.00 0.98
4843 6993 5.886960 AGGAATTTGCTGCGGATAATATC 57.113 39.130 0.00 0.00 0.00 1.63
4844 6994 4.702131 AGGAATTTGCTGCGGATAATATCC 59.298 41.667 9.23 9.23 46.22 2.59
4865 7025 6.065976 TCCCTATCTGAATGTGTGAAATGT 57.934 37.500 0.00 0.00 0.00 2.71
4872 7032 5.067544 TCTGAATGTGTGAAATGTTGCAAGA 59.932 36.000 0.00 0.00 0.00 3.02
4873 7033 5.845103 TGAATGTGTGAAATGTTGCAAGAT 58.155 33.333 2.67 2.67 0.00 2.40
4895 7055 3.843893 TGCTTGCTATTAGGATGCTGA 57.156 42.857 19.14 0.00 37.55 4.26
4896 7056 3.470709 TGCTTGCTATTAGGATGCTGAC 58.529 45.455 19.14 0.00 37.55 3.51
4901 7061 5.557576 TGCTATTAGGATGCTGACAGATT 57.442 39.130 6.65 0.00 0.00 2.40
4902 7062 5.303165 TGCTATTAGGATGCTGACAGATTG 58.697 41.667 6.65 0.00 0.00 2.67
4914 7075 2.948979 TGACAGATTGTTGGTTCGCTTT 59.051 40.909 0.00 0.00 0.00 3.51
4917 7078 4.134563 ACAGATTGTTGGTTCGCTTTACT 58.865 39.130 0.00 0.00 0.00 2.24
4927 7088 5.412640 TGGTTCGCTTTACTCGATGATTTA 58.587 37.500 0.00 0.00 35.75 1.40
4935 7096 1.792949 ACTCGATGATTTATTCGCCGC 59.207 47.619 0.00 0.00 0.00 6.53
4946 7107 0.168128 ATTCGCCGCAAACTAAGCAC 59.832 50.000 0.00 0.00 0.00 4.40
4950 7111 1.072666 GCCGCAAACTAAGCACATGC 61.073 55.000 0.00 0.00 42.49 4.06
4962 7123 1.955762 GCACATGCGTTTCTTCAGAC 58.044 50.000 0.00 0.00 0.00 3.51
4978 7139 4.553330 TCAGACACCCTCCTTATTGAAC 57.447 45.455 0.00 0.00 0.00 3.18
4979 7140 3.263425 TCAGACACCCTCCTTATTGAACC 59.737 47.826 0.00 0.00 0.00 3.62
4984 7145 1.006832 CCTCCTTATTGAACCGTGCG 58.993 55.000 0.00 0.00 0.00 5.34
4986 7147 1.393539 CTCCTTATTGAACCGTGCGTG 59.606 52.381 0.00 0.00 0.00 5.34
4987 7148 1.153353 CCTTATTGAACCGTGCGTGT 58.847 50.000 0.00 0.00 0.00 4.49
4988 7149 1.533731 CCTTATTGAACCGTGCGTGTT 59.466 47.619 0.00 0.00 0.00 3.32
4989 7150 2.570169 CTTATTGAACCGTGCGTGTTG 58.430 47.619 3.89 0.00 0.00 3.33
4990 7151 1.867166 TATTGAACCGTGCGTGTTGA 58.133 45.000 3.89 0.00 0.00 3.18
4991 7152 0.586319 ATTGAACCGTGCGTGTTGAG 59.414 50.000 3.89 0.00 0.00 3.02
4992 7153 0.741574 TTGAACCGTGCGTGTTGAGT 60.742 50.000 3.89 0.00 0.00 3.41
4997 7165 2.331451 GTGCGTGTTGAGTTGGCC 59.669 61.111 0.00 0.00 0.00 5.36
5043 7214 3.696281 TGACAGTTCATGTGCTTGTTG 57.304 42.857 0.00 0.00 44.17 3.33
5081 7252 3.485463 TCTGCCCAATAATAGGTTCCG 57.515 47.619 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.885850 GCGTCACGGAAACCTGTGT 60.886 57.895 0.00 0.00 37.38 3.72
10 11 2.372690 CGAGCGTCACGGAAACCTG 61.373 63.158 0.00 0.00 0.00 4.00
50 51 2.628106 CATGAGATTTCGGCGGCG 59.372 61.111 27.15 27.15 0.00 6.46
54 55 1.273887 CGTCGCATGAGATTTCGGC 59.726 57.895 1.41 0.00 0.00 5.54
79 80 2.338015 TAGGTGTCGAGCCACGTCC 61.338 63.158 4.84 3.61 43.13 4.79
133 134 0.534203 GTGGAACCTTCAAGCCACGA 60.534 55.000 0.00 0.00 41.08 4.35
150 151 0.955178 AGCTCGGATCTCGTATGGTG 59.045 55.000 0.00 0.00 40.32 4.17
154 155 1.264557 CGTTCAGCTCGGATCTCGTAT 59.735 52.381 0.00 0.00 40.32 3.06
155 156 0.656259 CGTTCAGCTCGGATCTCGTA 59.344 55.000 0.00 0.00 40.32 3.43
157 158 1.941734 GCGTTCAGCTCGGATCTCG 60.942 63.158 0.00 0.00 44.04 4.04
169 170 1.561717 CGGAACATCAACGGCGTTCA 61.562 55.000 24.21 11.66 40.62 3.18
170 171 1.131826 CGGAACATCAACGGCGTTC 59.868 57.895 24.21 10.64 38.62 3.95
177 1920 2.479837 TGTGACACTCGGAACATCAAC 58.520 47.619 7.20 0.00 0.00 3.18
213 1956 0.249073 ACATACCGCACATCGAGAGC 60.249 55.000 0.00 0.00 41.67 4.09
216 1959 1.200483 GACACATACCGCACATCGAG 58.800 55.000 0.00 0.00 41.67 4.04
220 1963 4.954933 GGGACACATACCGCACAT 57.045 55.556 0.00 0.00 0.00 3.21
248 1991 1.134560 ACGACTAGGCGGTCTTCATTC 59.865 52.381 24.42 0.00 34.38 2.67
249 1992 1.135083 CACGACTAGGCGGTCTTCATT 60.135 52.381 24.42 0.00 34.38 2.57
270 2013 1.885157 CATGGGCGATGTGTTGCTT 59.115 52.632 0.78 0.00 34.97 3.91
302 2045 0.591659 CGGCGAATCTCGTCATAGGA 59.408 55.000 0.00 0.00 46.15 2.94
346 2089 0.109781 GGCAAAGAATTCGCGCTTCA 60.110 50.000 19.04 0.00 0.00 3.02
394 2140 2.803451 CCTCGTCCTCTTTCTTGATCG 58.197 52.381 0.00 0.00 0.00 3.69
403 2149 1.985116 GGACCTGCCTCGTCCTCTT 60.985 63.158 6.69 0.00 45.41 2.85
424 2170 2.703007 GACTCTAGCTTGATCACCCCAT 59.297 50.000 0.00 0.00 0.00 4.00
425 2171 2.111384 GACTCTAGCTTGATCACCCCA 58.889 52.381 0.00 0.00 0.00 4.96
446 2192 3.447742 TCGGACTCAACATCAATCATCG 58.552 45.455 0.00 0.00 0.00 3.84
452 2198 6.169800 TCAATAACATCGGACTCAACATCAA 58.830 36.000 0.00 0.00 0.00 2.57
453 2199 5.729510 TCAATAACATCGGACTCAACATCA 58.270 37.500 0.00 0.00 0.00 3.07
454 2200 6.313905 AGTTCAATAACATCGGACTCAACATC 59.686 38.462 0.00 0.00 38.12 3.06
455 2201 6.092670 CAGTTCAATAACATCGGACTCAACAT 59.907 38.462 0.00 0.00 38.12 2.71
456 2202 5.408299 CAGTTCAATAACATCGGACTCAACA 59.592 40.000 0.00 0.00 38.12 3.33
457 2203 5.163854 CCAGTTCAATAACATCGGACTCAAC 60.164 44.000 0.00 0.00 38.12 3.18
464 2210 5.353956 TGATTGTCCAGTTCAATAACATCGG 59.646 40.000 0.00 0.00 38.12 4.18
465 2211 6.421377 TGATTGTCCAGTTCAATAACATCG 57.579 37.500 0.00 0.00 38.12 3.84
486 2232 4.891627 TTCGTCATTTTCAAACTGCTGA 57.108 36.364 0.00 0.00 0.00 4.26
487 2233 5.947503 TTTTCGTCATTTTCAAACTGCTG 57.052 34.783 0.00 0.00 0.00 4.41
488 2234 7.148755 GCATATTTTCGTCATTTTCAAACTGCT 60.149 33.333 0.00 0.00 0.00 4.24
489 2235 6.949877 GCATATTTTCGTCATTTTCAAACTGC 59.050 34.615 0.00 0.00 0.00 4.40
490 2236 8.005662 TGCATATTTTCGTCATTTTCAAACTG 57.994 30.769 0.00 0.00 0.00 3.16
491 2237 8.586570 TTGCATATTTTCGTCATTTTCAAACT 57.413 26.923 0.00 0.00 0.00 2.66
492 2238 9.464248 GATTGCATATTTTCGTCATTTTCAAAC 57.536 29.630 0.00 0.00 0.00 2.93
493 2239 9.201127 TGATTGCATATTTTCGTCATTTTCAAA 57.799 25.926 0.00 0.00 0.00 2.69
494 2240 8.754230 TGATTGCATATTTTCGTCATTTTCAA 57.246 26.923 0.00 0.00 0.00 2.69
495 2241 8.809478 CATGATTGCATATTTTCGTCATTTTCA 58.191 29.630 0.00 0.00 32.27 2.69
496 2242 8.810427 ACATGATTGCATATTTTCGTCATTTTC 58.190 29.630 0.00 0.00 32.27 2.29
497 2243 8.706492 ACATGATTGCATATTTTCGTCATTTT 57.294 26.923 0.00 0.00 32.27 1.82
498 2244 8.706492 AACATGATTGCATATTTTCGTCATTT 57.294 26.923 0.00 0.00 32.27 2.32
499 2245 8.706492 AAACATGATTGCATATTTTCGTCATT 57.294 26.923 0.00 0.00 26.95 2.57
500 2246 9.970395 ATAAACATGATTGCATATTTTCGTCAT 57.030 25.926 0.00 0.00 33.48 3.06
501 2247 9.800433 AATAAACATGATTGCATATTTTCGTCA 57.200 25.926 0.00 0.00 33.48 4.35
504 2250 9.852481 CCAAATAAACATGATTGCATATTTTCG 57.148 29.630 0.00 0.00 33.48 3.46
507 2253 8.614346 GCACCAAATAAACATGATTGCATATTT 58.386 29.630 0.00 0.00 35.46 1.40
508 2254 7.227116 GGCACCAAATAAACATGATTGCATATT 59.773 33.333 0.00 0.00 32.27 1.28
509 2255 6.707161 GGCACCAAATAAACATGATTGCATAT 59.293 34.615 0.00 0.00 32.27 1.78
510 2256 6.047870 GGCACCAAATAAACATGATTGCATA 58.952 36.000 0.00 0.00 32.27 3.14
511 2257 4.877251 GGCACCAAATAAACATGATTGCAT 59.123 37.500 0.00 0.00 34.29 3.96
512 2258 4.252073 GGCACCAAATAAACATGATTGCA 58.748 39.130 0.00 0.00 0.00 4.08
513 2259 4.863152 GGCACCAAATAAACATGATTGC 57.137 40.909 0.00 0.00 0.00 3.56
524 2270 8.832910 AGATGACGTCTAATAGGGCACCAAATA 61.833 40.741 17.92 0.00 44.51 1.40
525 2271 8.100366 AGATGACGTCTAATAGGGCACCAAAT 62.100 42.308 17.92 0.00 44.51 2.32
531 2277 2.035961 GCAGATGACGTCTAATAGGGCA 59.964 50.000 17.92 0.00 34.69 5.36
565 2311 8.308207 GGTATGTAAAATAGGGCACAAGAAAAA 58.692 33.333 0.00 0.00 0.00 1.94
574 2320 3.203263 TGCCAGGTATGTAAAATAGGGCA 59.797 43.478 0.00 0.00 45.75 5.36
588 2334 1.563924 ATGTTCTACCGTGCCAGGTA 58.436 50.000 7.14 7.14 43.89 3.08
621 2367 5.013599 TCTCCATCGGATGATAGAGAGAGAA 59.986 44.000 19.30 3.77 42.17 2.87
672 2455 1.668237 GAGTCGTTACTCGGGGACTAC 59.332 57.143 0.00 0.00 42.66 2.73
687 2472 2.407210 GCTGAGAGAGCGGAGTCG 59.593 66.667 0.00 0.00 38.15 4.18
714 2502 1.262950 CGTGTCACGCCAGATTTTTCA 59.737 47.619 13.22 0.00 33.65 2.69
762 2550 3.015327 GAGTAGTACATCACCACCTCGT 58.985 50.000 2.52 0.00 0.00 4.18
763 2551 2.358267 GGAGTAGTACATCACCACCTCG 59.642 54.545 2.52 0.00 0.00 4.63
766 2559 3.635836 GGTAGGAGTAGTACATCACCACC 59.364 52.174 2.52 7.17 0.00 4.61
767 2560 3.635836 GGGTAGGAGTAGTACATCACCAC 59.364 52.174 2.52 2.80 0.00 4.16
768 2561 3.373438 GGGGTAGGAGTAGTACATCACCA 60.373 52.174 2.52 0.00 0.00 4.17
770 2563 3.635836 GTGGGGTAGGAGTAGTACATCAC 59.364 52.174 2.52 0.00 0.00 3.06
771 2564 3.530564 AGTGGGGTAGGAGTAGTACATCA 59.469 47.826 2.52 0.00 0.00 3.07
773 2566 5.616122 AGATAGTGGGGTAGGAGTAGTACAT 59.384 44.000 2.52 0.00 0.00 2.29
774 2567 4.980342 AGATAGTGGGGTAGGAGTAGTACA 59.020 45.833 2.52 0.00 0.00 2.90
775 2568 5.514659 GGAGATAGTGGGGTAGGAGTAGTAC 60.515 52.000 0.00 0.00 0.00 2.73
785 2578 0.260816 AGCGTGGAGATAGTGGGGTA 59.739 55.000 0.00 0.00 0.00 3.69
786 2579 0.260816 TAGCGTGGAGATAGTGGGGT 59.739 55.000 0.00 0.00 0.00 4.95
787 2580 0.674534 GTAGCGTGGAGATAGTGGGG 59.325 60.000 0.00 0.00 0.00 4.96
788 2581 1.609555 GAGTAGCGTGGAGATAGTGGG 59.390 57.143 0.00 0.00 0.00 4.61
789 2582 1.264557 CGAGTAGCGTGGAGATAGTGG 59.735 57.143 0.00 0.00 34.64 4.00
811 2604 4.016444 AGCGCCTTCTGATTTGGATTTAA 58.984 39.130 2.29 0.00 0.00 1.52
824 2617 1.227380 CTGCGGATTAGCGCCTTCT 60.227 57.895 2.29 0.00 40.67 2.85
829 2622 0.248907 TACTGACTGCGGATTAGCGC 60.249 55.000 0.00 0.00 40.67 5.92
830 2623 1.065701 ACTACTGACTGCGGATTAGCG 59.934 52.381 0.00 0.00 40.67 4.26
840 2633 9.043079 TGAAGATCGTTATACTACTACTGACTG 57.957 37.037 0.00 0.00 0.00 3.51
858 2655 1.202580 GGGACAGGGACATGAAGATCG 60.203 57.143 0.00 0.00 0.00 3.69
866 2684 0.251341 GCAGTTTGGGACAGGGACAT 60.251 55.000 0.00 0.00 42.39 3.06
899 2717 2.725008 GATGGAGAGGAGACGGCG 59.275 66.667 4.80 4.80 0.00 6.46
900 2718 2.503382 GGGATGGAGAGGAGACGGC 61.503 68.421 0.00 0.00 0.00 5.68
901 2719 1.834822 GGGGATGGAGAGGAGACGG 60.835 68.421 0.00 0.00 0.00 4.79
902 2720 0.825840 GAGGGGATGGAGAGGAGACG 60.826 65.000 0.00 0.00 0.00 4.18
903 2721 0.825840 CGAGGGGATGGAGAGGAGAC 60.826 65.000 0.00 0.00 0.00 3.36
904 2722 0.994050 TCGAGGGGATGGAGAGGAGA 60.994 60.000 0.00 0.00 0.00 3.71
905 2723 0.114168 ATCGAGGGGATGGAGAGGAG 59.886 60.000 0.00 0.00 32.92 3.69
906 2724 0.113385 GATCGAGGGGATGGAGAGGA 59.887 60.000 0.00 0.00 34.82 3.71
913 2731 0.312416 GACGTCAGATCGAGGGGATG 59.688 60.000 11.55 0.00 34.82 3.51
914 2732 0.106669 TGACGTCAGATCGAGGGGAT 60.107 55.000 15.76 0.00 38.35 3.85
918 2736 1.001924 CAGGATGACGTCAGATCGAGG 60.002 57.143 24.41 6.66 39.69 4.63
922 2740 1.269517 GGAGCAGGATGACGTCAGATC 60.270 57.143 24.41 17.08 39.69 2.75
933 2751 0.685785 TTCAGAGCTCGGAGCAGGAT 60.686 55.000 29.88 10.94 45.56 3.24
934 2752 0.900182 TTTCAGAGCTCGGAGCAGGA 60.900 55.000 29.88 20.35 45.56 3.86
935 2753 0.739112 GTTTCAGAGCTCGGAGCAGG 60.739 60.000 29.88 18.54 45.56 4.85
936 2754 0.739112 GGTTTCAGAGCTCGGAGCAG 60.739 60.000 29.88 19.15 45.56 4.24
937 2755 1.293498 GGTTTCAGAGCTCGGAGCA 59.707 57.895 29.88 8.21 45.56 4.26
938 2756 1.448717 GGGTTTCAGAGCTCGGAGC 60.449 63.158 22.13 22.13 42.84 4.70
939 2757 0.390472 GTGGGTTTCAGAGCTCGGAG 60.390 60.000 16.20 7.06 0.00 4.63
940 2758 0.832135 AGTGGGTTTCAGAGCTCGGA 60.832 55.000 12.88 12.88 0.00 4.55
941 2759 0.390472 GAGTGGGTTTCAGAGCTCGG 60.390 60.000 8.37 7.99 0.00 4.63
942 2760 0.318441 TGAGTGGGTTTCAGAGCTCG 59.682 55.000 8.37 3.55 0.00 5.03
945 2763 1.230324 GTGTGAGTGGGTTTCAGAGC 58.770 55.000 0.00 0.00 0.00 4.09
959 2777 0.916086 AGGGTTCAGGTTGTGTGTGA 59.084 50.000 0.00 0.00 0.00 3.58
966 2784 1.685820 GGGGAGAGGGTTCAGGTTG 59.314 63.158 0.00 0.00 0.00 3.77
994 2817 0.251121 TGCCATTTGACCACGGTGAT 60.251 50.000 10.28 0.00 0.00 3.06
1149 2987 2.044551 GGAAAGCTCTGGCCCAGG 60.045 66.667 11.68 2.71 39.73 4.45
1164 3002 0.908910 ACCAATCTACACGGCATGGA 59.091 50.000 0.00 0.00 0.00 3.41
1168 3006 0.249120 CTCCACCAATCTACACGGCA 59.751 55.000 0.00 0.00 0.00 5.69
1169 3007 0.249398 ACTCCACCAATCTACACGGC 59.751 55.000 0.00 0.00 0.00 5.68
1170 3008 1.825474 AGACTCCACCAATCTACACGG 59.175 52.381 0.00 0.00 0.00 4.94
1180 3028 0.250424 TCGTACACGAGACTCCACCA 60.250 55.000 0.00 0.00 44.22 4.17
1181 3029 2.548178 TCGTACACGAGACTCCACC 58.452 57.895 0.00 0.00 44.22 4.61
1193 3041 3.498121 GGGGATCTCCAGACTATCGTACA 60.498 52.174 6.79 0.00 37.91 2.90
1195 3043 2.987437 AGGGGATCTCCAGACTATCGTA 59.013 50.000 15.83 0.00 37.91 3.43
1196 3044 1.783979 AGGGGATCTCCAGACTATCGT 59.216 52.381 15.83 0.00 37.91 3.73
1197 3045 2.166829 CAGGGGATCTCCAGACTATCG 58.833 57.143 15.83 0.00 37.91 2.92
1198 3046 2.896685 CACAGGGGATCTCCAGACTATC 59.103 54.545 15.83 0.00 37.91 2.08
1199 3047 2.427002 CCACAGGGGATCTCCAGACTAT 60.427 54.545 15.83 0.00 40.01 2.12
1200 3048 1.062886 CCACAGGGGATCTCCAGACTA 60.063 57.143 15.83 0.00 40.01 2.59
1201 3049 0.326048 CCACAGGGGATCTCCAGACT 60.326 60.000 15.83 0.00 40.01 3.24
1202 3050 0.618968 ACCACAGGGGATCTCCAGAC 60.619 60.000 15.83 0.00 41.15 3.51
1203 3051 0.325671 GACCACAGGGGATCTCCAGA 60.326 60.000 15.83 0.00 41.15 3.86
1204 3052 1.680522 CGACCACAGGGGATCTCCAG 61.681 65.000 15.83 8.78 41.15 3.86
1205 3053 1.685765 CGACCACAGGGGATCTCCA 60.686 63.158 15.83 0.00 41.15 3.86
1206 3054 3.095347 GCGACCACAGGGGATCTCC 62.095 68.421 2.22 2.22 41.15 3.71
1207 3055 2.501610 GCGACCACAGGGGATCTC 59.498 66.667 0.00 0.00 41.15 2.75
1208 3056 3.461773 CGCGACCACAGGGGATCT 61.462 66.667 0.00 0.00 41.15 2.75
1209 3057 4.530857 CCGCGACCACAGGGGATC 62.531 72.222 8.23 0.00 43.49 3.36
1249 3101 2.295349 TCGAACAGAAGTCAGTACCACC 59.705 50.000 0.00 0.00 0.00 4.61
1250 3102 3.637998 TCGAACAGAAGTCAGTACCAC 57.362 47.619 0.00 0.00 0.00 4.16
1251 3103 3.056821 CCATCGAACAGAAGTCAGTACCA 60.057 47.826 0.00 0.00 0.00 3.25
1258 3136 4.058817 ACAAGAACCATCGAACAGAAGTC 58.941 43.478 0.00 0.00 0.00 3.01
1263 3141 3.563808 TGGAAACAAGAACCATCGAACAG 59.436 43.478 0.00 0.00 37.44 3.16
1350 3228 2.110967 CCCCACTGCGATCTTGCTG 61.111 63.158 0.00 0.00 39.43 4.41
1418 3296 8.582437 ACTATTACTAATATTGCTACTCGCCAA 58.418 33.333 0.00 0.00 38.05 4.52
1440 3318 9.726438 ATTCTGCTAGAAACAAAAGTGTACTAT 57.274 29.630 0.00 0.00 37.82 2.12
1442 3320 9.726438 ATATTCTGCTAGAAACAAAAGTGTACT 57.274 29.630 0.00 0.00 37.82 2.73
1468 3349 5.105473 AGCCACAGAAGCGAACTATTACTAA 60.105 40.000 0.00 0.00 34.64 2.24
1469 3350 4.401519 AGCCACAGAAGCGAACTATTACTA 59.598 41.667 0.00 0.00 34.64 1.82
1471 3352 3.307242 CAGCCACAGAAGCGAACTATTAC 59.693 47.826 0.00 0.00 34.64 1.89
1472 3353 3.521560 CAGCCACAGAAGCGAACTATTA 58.478 45.455 0.00 0.00 34.64 0.98
1476 3357 1.963338 GCAGCCACAGAAGCGAACT 60.963 57.895 0.00 0.00 34.64 3.01
1505 3391 8.342634 GCAAGATACAAGTCTGAAACTGTTAAA 58.657 33.333 0.00 0.00 38.58 1.52
1506 3392 7.497579 TGCAAGATACAAGTCTGAAACTGTTAA 59.502 33.333 0.00 0.00 38.58 2.01
1507 3393 6.989759 TGCAAGATACAAGTCTGAAACTGTTA 59.010 34.615 0.00 0.00 38.58 2.41
1508 3394 5.822519 TGCAAGATACAAGTCTGAAACTGTT 59.177 36.000 0.00 0.00 38.58 3.16
1509 3395 5.368145 TGCAAGATACAAGTCTGAAACTGT 58.632 37.500 0.00 0.00 38.58 3.55
1510 3396 5.106791 CCTGCAAGATACAAGTCTGAAACTG 60.107 44.000 0.00 0.00 34.85 3.16
1511 3397 4.999950 CCTGCAAGATACAAGTCTGAAACT 59.000 41.667 0.00 0.00 36.05 2.66
1512 3398 4.154918 CCCTGCAAGATACAAGTCTGAAAC 59.845 45.833 0.00 0.00 34.07 2.78
1513 3399 4.202461 ACCCTGCAAGATACAAGTCTGAAA 60.202 41.667 0.00 0.00 34.07 2.69
1688 3575 4.934001 CAGACAGAGCTAAATCAGAGCAAA 59.066 41.667 0.00 0.00 42.69 3.68
1694 3581 5.177326 AGAAAGCAGACAGAGCTAAATCAG 58.823 41.667 0.00 0.00 42.53 2.90
1706 3593 2.487265 GGTCTTTGGGAGAAAGCAGACA 60.487 50.000 0.00 0.00 35.79 3.41
1708 3595 1.774254 TGGTCTTTGGGAGAAAGCAGA 59.226 47.619 0.00 0.00 35.79 4.26
1731 3629 8.828644 TCAAACTAGTGTAAAAAGCGTAATTGA 58.171 29.630 0.00 0.00 0.00 2.57
1738 3636 7.855904 AGTGAATTCAAACTAGTGTAAAAAGCG 59.144 33.333 10.35 0.00 0.00 4.68
1739 3637 8.958043 CAGTGAATTCAAACTAGTGTAAAAAGC 58.042 33.333 10.35 0.00 0.00 3.51
1740 3638 9.450807 CCAGTGAATTCAAACTAGTGTAAAAAG 57.549 33.333 10.35 0.00 0.00 2.27
1741 3639 8.410141 CCCAGTGAATTCAAACTAGTGTAAAAA 58.590 33.333 10.35 0.00 0.00 1.94
1744 3642 6.597562 ACCCAGTGAATTCAAACTAGTGTAA 58.402 36.000 10.35 0.00 0.00 2.41
1746 3644 5.048846 ACCCAGTGAATTCAAACTAGTGT 57.951 39.130 10.35 0.00 0.00 3.55
1767 3665 4.097437 TCGTCATATCCCTGTTCACTGTAC 59.903 45.833 0.00 0.00 0.00 2.90
1770 3668 3.801114 TCGTCATATCCCTGTTCACTG 57.199 47.619 0.00 0.00 0.00 3.66
1772 3670 5.006746 GTCAATTCGTCATATCCCTGTTCAC 59.993 44.000 0.00 0.00 0.00 3.18
1775 3673 4.119862 CGTCAATTCGTCATATCCCTGTT 58.880 43.478 0.00 0.00 0.00 3.16
1777 3675 3.977427 TCGTCAATTCGTCATATCCCTG 58.023 45.455 0.00 0.00 0.00 4.45
1778 3676 4.560128 CATCGTCAATTCGTCATATCCCT 58.440 43.478 0.00 0.00 0.00 4.20
1779 3677 3.679980 CCATCGTCAATTCGTCATATCCC 59.320 47.826 0.00 0.00 0.00 3.85
1780 3678 4.556233 TCCATCGTCAATTCGTCATATCC 58.444 43.478 0.00 0.00 0.00 2.59
1781 3679 7.812309 TTATCCATCGTCAATTCGTCATATC 57.188 36.000 0.00 0.00 0.00 1.63
1783 3681 7.655732 ACATTTATCCATCGTCAATTCGTCATA 59.344 33.333 0.00 0.00 0.00 2.15
1785 3683 5.815222 ACATTTATCCATCGTCAATTCGTCA 59.185 36.000 0.00 0.00 0.00 4.35
1786 3684 6.287107 ACATTTATCCATCGTCAATTCGTC 57.713 37.500 0.00 0.00 0.00 4.20
1787 3685 6.315144 TGAACATTTATCCATCGTCAATTCGT 59.685 34.615 0.00 0.00 0.00 3.85
1788 3686 6.714492 TGAACATTTATCCATCGTCAATTCG 58.286 36.000 0.00 0.00 0.00 3.34
1790 3688 9.304731 CAATTGAACATTTATCCATCGTCAATT 57.695 29.630 0.00 0.00 35.36 2.32
1791 3689 8.685427 TCAATTGAACATTTATCCATCGTCAAT 58.315 29.630 5.45 0.00 0.00 2.57
1792 3690 7.967854 GTCAATTGAACATTTATCCATCGTCAA 59.032 33.333 10.35 0.00 0.00 3.18
1795 3698 7.336679 TGAGTCAATTGAACATTTATCCATCGT 59.663 33.333 10.35 0.00 0.00 3.73
1815 3718 8.367660 ACCATCTCTCTAACTTAATTGAGTCA 57.632 34.615 3.00 0.00 0.00 3.41
1816 3719 9.738832 GTACCATCTCTCTAACTTAATTGAGTC 57.261 37.037 3.00 0.00 0.00 3.36
1825 3728 6.017192 TCAACAGGTACCATCTCTCTAACTT 58.983 40.000 15.94 0.00 0.00 2.66
1845 3748 6.016610 TGTGTTTGCTTTCCTAATACCTCAAC 60.017 38.462 0.00 0.00 0.00 3.18
1847 3750 5.626142 TGTGTTTGCTTTCCTAATACCTCA 58.374 37.500 0.00 0.00 0.00 3.86
1862 3765 8.113675 CCAAACTGTACTTTAATTTGTGTTTGC 58.886 33.333 0.00 0.00 39.82 3.68
1866 3769 6.277605 GCCCAAACTGTACTTTAATTTGTGT 58.722 36.000 0.00 0.00 0.00 3.72
1869 3772 5.401079 CACGCCCAAACTGTACTTTAATTTG 59.599 40.000 0.00 0.00 0.00 2.32
1874 3777 3.196939 ACACGCCCAAACTGTACTTTA 57.803 42.857 0.00 0.00 0.00 1.85
1875 3778 2.047002 ACACGCCCAAACTGTACTTT 57.953 45.000 0.00 0.00 0.00 2.66
1877 3780 1.134340 TGAACACGCCCAAACTGTACT 60.134 47.619 0.00 0.00 0.00 2.73
1878 3781 1.301423 TGAACACGCCCAAACTGTAC 58.699 50.000 0.00 0.00 0.00 2.90
1887 3790 4.089105 TTCCCAATGAACACGCCC 57.911 55.556 0.00 0.00 0.00 6.13
1898 3801 4.927267 ATGGTATCAGTTGAGTTCCCAA 57.073 40.909 0.00 0.00 0.00 4.12
1987 4054 9.655769 CGGTGAGTCATTTGATTTATTAGATTG 57.344 33.333 0.00 0.00 0.00 2.67
1988 4055 8.840321 CCGGTGAGTCATTTGATTTATTAGATT 58.160 33.333 0.00 0.00 0.00 2.40
1989 4056 7.445402 CCCGGTGAGTCATTTGATTTATTAGAT 59.555 37.037 0.00 0.00 0.00 1.98
1990 4057 6.765989 CCCGGTGAGTCATTTGATTTATTAGA 59.234 38.462 0.00 0.00 0.00 2.10
1991 4058 6.542370 ACCCGGTGAGTCATTTGATTTATTAG 59.458 38.462 0.00 0.00 0.00 1.73
1992 4059 6.419791 ACCCGGTGAGTCATTTGATTTATTA 58.580 36.000 0.00 0.00 0.00 0.98
1994 4061 4.855340 ACCCGGTGAGTCATTTGATTTAT 58.145 39.130 0.00 0.00 0.00 1.40
2007 4084 2.240162 GACTGGCCTTACCCGGTGAG 62.240 65.000 3.32 0.49 44.42 3.51
2011 4088 1.078426 CTTGACTGGCCTTACCCGG 60.078 63.158 3.32 0.00 37.83 5.73
2013 4090 1.205460 TCCCTTGACTGGCCTTACCC 61.205 60.000 3.32 0.00 37.83 3.69
2022 4099 1.002868 CAGCCCTGTCCCTTGACTG 60.003 63.158 0.00 0.00 42.28 3.51
2030 4107 2.048603 GTGGAATGCAGCCCTGTCC 61.049 63.158 8.41 0.00 0.00 4.02
2031 4108 0.895100 TTGTGGAATGCAGCCCTGTC 60.895 55.000 8.41 1.38 0.00 3.51
2035 4112 0.811281 GTACTTGTGGAATGCAGCCC 59.189 55.000 5.98 3.28 0.00 5.19
2036 4113 1.533625 TGTACTTGTGGAATGCAGCC 58.466 50.000 0.00 0.00 0.00 4.85
2069 4147 4.282195 TGAATGGTTGGGTTTACATGTTCC 59.718 41.667 2.30 4.75 0.00 3.62
2077 4155 4.042311 TGAGCTACTGAATGGTTGGGTTTA 59.958 41.667 0.00 0.00 0.00 2.01
2085 4164 6.183360 GCATATGTTTTGAGCTACTGAATGGT 60.183 38.462 4.29 0.00 0.00 3.55
2086 4165 6.039047 AGCATATGTTTTGAGCTACTGAATGG 59.961 38.462 4.29 0.00 33.06 3.16
2110 4189 7.662604 TGTATTACATCAAGCATGCTATCAG 57.337 36.000 23.00 14.08 35.65 2.90
2113 4192 8.625786 TGATTGTATTACATCAAGCATGCTAT 57.374 30.769 23.00 9.14 35.53 2.97
2128 4207 9.884636 AGTACTAGCACAACAATGATTGTATTA 57.115 29.630 11.70 0.22 44.59 0.98
2139 4219 3.581332 AGCCCTTAGTACTAGCACAACAA 59.419 43.478 13.34 0.00 0.00 2.83
2152 4232 6.123045 ACACAAATGTAAGTAGCCCTTAGT 57.877 37.500 0.00 0.00 37.26 2.24
2154 4234 7.853299 TCATACACAAATGTAAGTAGCCCTTA 58.147 34.615 0.00 0.00 44.47 2.69
2155 4235 6.717289 TCATACACAAATGTAAGTAGCCCTT 58.283 36.000 0.00 0.00 44.47 3.95
2156 4236 6.308015 TCATACACAAATGTAAGTAGCCCT 57.692 37.500 0.00 0.00 44.47 5.19
2157 4237 5.007724 GCTCATACACAAATGTAAGTAGCCC 59.992 44.000 7.36 0.00 44.47 5.19
2158 4238 5.276868 CGCTCATACACAAATGTAAGTAGCC 60.277 44.000 10.74 0.00 44.47 3.93
2160 4240 6.530181 TCACGCTCATACACAAATGTAAGTAG 59.470 38.462 0.00 0.00 44.47 2.57
2162 4242 5.120208 GTCACGCTCATACACAAATGTAAGT 59.880 40.000 0.00 0.00 44.47 2.24
2163 4243 5.348724 AGTCACGCTCATACACAAATGTAAG 59.651 40.000 0.00 0.00 44.47 2.34
2166 4246 3.433274 CAGTCACGCTCATACACAAATGT 59.567 43.478 0.00 0.00 43.30 2.71
2172 4252 1.721389 CACACAGTCACGCTCATACAC 59.279 52.381 0.00 0.00 0.00 2.90
2174 4254 0.716108 GCACACAGTCACGCTCATAC 59.284 55.000 0.00 0.00 0.00 2.39
2181 4261 3.367932 CAGGTTATTAGCACACAGTCACG 59.632 47.826 0.00 0.00 0.00 4.35
2265 4345 8.592105 TTTTTATTGCTTCAATGAAGTCCTTG 57.408 30.769 22.28 0.00 41.27 3.61
2375 4455 4.023707 CAGCAGTAGGAAGGTTGAAAGTTG 60.024 45.833 0.00 0.00 0.00 3.16
2376 4456 4.137543 CAGCAGTAGGAAGGTTGAAAGTT 58.862 43.478 0.00 0.00 0.00 2.66
2422 4502 7.067494 GTCCCTTATGAAGTCATGCTAAAACAT 59.933 37.037 4.00 0.00 37.15 2.71
2481 4561 3.070018 CAGCACCTAGAAACAAGTCCAG 58.930 50.000 0.00 0.00 0.00 3.86
2504 4584 5.106197 GCTCACACATGAAACCAACATGATA 60.106 40.000 13.54 0.00 45.22 2.15
2552 4632 0.458025 GTGGATCGGTCAGGAACGTC 60.458 60.000 6.62 4.04 43.08 4.34
2603 4683 1.344942 CCGCACTAGCTGTCGACAAC 61.345 60.000 20.49 15.69 39.10 3.32
2604 4684 1.080772 CCGCACTAGCTGTCGACAA 60.081 57.895 20.49 3.77 39.10 3.18
2681 4761 4.201657 CAATGCTGGACATCATTCCTACA 58.798 43.478 0.00 0.00 38.34 2.74
2823 4903 3.259123 AGGTGGGCAGCAAAAGATAAAAG 59.741 43.478 0.00 0.00 0.00 2.27
2846 4926 9.694137 AAGTTAGACGCATTAGATATTTACTCC 57.306 33.333 0.00 0.00 0.00 3.85
2921 5001 0.394899 GTGGAGGGAGAAATGGCTGG 60.395 60.000 0.00 0.00 0.00 4.85
3097 5177 2.775890 CCTTCACATCAGCTGACTTGT 58.224 47.619 20.97 17.88 0.00 3.16
3158 5238 7.225538 ACAACAAATCGTAATCCAATTGCAAAA 59.774 29.630 1.71 0.00 0.00 2.44
3189 5269 8.409358 AAATATTGGTAAGACAAGAAGCAACT 57.591 30.769 0.00 0.00 33.87 3.16
3311 5391 1.414550 GATGAGGCCTTGGAGGAGTAC 59.585 57.143 6.77 0.00 37.67 2.73
3327 5409 5.122519 TGCGGATATAAAAGCAACAGATGA 58.877 37.500 0.00 0.00 36.60 2.92
3403 5485 2.483491 GCCATAGCTGCTCTTTAGATGC 59.517 50.000 4.91 0.00 35.50 3.91
3532 5614 9.381038 AGTGTCCATCATATATGGTACTAAACT 57.619 33.333 12.78 2.79 40.06 2.66
3533 5615 9.424319 CAGTGTCCATCATATATGGTACTAAAC 57.576 37.037 12.78 0.64 40.06 2.01
3535 5617 7.234577 TGCAGTGTCCATCATATATGGTACTAA 59.765 37.037 12.78 0.00 40.06 2.24
3536 5618 6.723977 TGCAGTGTCCATCATATATGGTACTA 59.276 38.462 12.78 0.00 40.06 1.82
3537 5619 5.543790 TGCAGTGTCCATCATATATGGTACT 59.456 40.000 12.78 3.31 40.06 2.73
3556 5642 2.422479 GTCATGATGCTGTGATTGCAGT 59.578 45.455 0.00 0.00 44.04 4.40
3575 5661 7.301054 CAACAGATGGTCATAGAAAACAAGTC 58.699 38.462 0.00 0.00 0.00 3.01
3587 5673 4.720127 TGCGCAACAGATGGTCAT 57.280 50.000 8.16 0.00 0.00 3.06
3688 5776 5.299279 ACACTTGTGTTTTCTTGGACCATAG 59.701 40.000 0.00 0.00 0.00 2.23
3715 5803 2.520741 CCAGTGGTTTTGCGGGGT 60.521 61.111 0.00 0.00 0.00 4.95
3717 5805 3.989787 GCCCAGTGGTTTTGCGGG 61.990 66.667 8.74 0.00 40.11 6.13
3725 5813 2.496679 AGTATATCCAGCCCAGTGGT 57.503 50.000 8.74 0.00 38.88 4.16
3768 5867 2.302260 TGTTCTTGGCGATTTGGTCAA 58.698 42.857 0.00 0.00 0.00 3.18
3816 5915 1.227380 GGCCGTCTATGGTCTGCAG 60.227 63.158 7.63 7.63 0.00 4.41
3844 5943 1.451504 CCTGGTGTCTCACTTGGCA 59.548 57.895 0.06 0.00 34.40 4.92
3845 5944 1.302832 CCCTGGTGTCTCACTTGGC 60.303 63.158 0.00 0.00 34.40 4.52
3846 5945 0.035458 GACCCTGGTGTCTCACTTGG 59.965 60.000 0.00 3.19 34.40 3.61
3847 5946 0.758734 TGACCCTGGTGTCTCACTTG 59.241 55.000 13.91 0.00 36.21 3.16
3848 5947 0.759346 GTGACCCTGGTGTCTCACTT 59.241 55.000 13.91 0.00 36.21 3.16
3856 5957 2.030562 GTCACGGTGACCCTGGTG 59.969 66.667 26.86 0.00 41.37 4.17
3917 6018 7.936847 TCCTACAATGTTACACAGACATCTTTT 59.063 33.333 0.00 0.00 36.76 2.27
3935 6038 7.964293 AGAGGTTATCCCTATGAATCCTACAAT 59.036 37.037 0.00 0.00 46.51 2.71
3938 6041 6.381707 GGAGAGGTTATCCCTATGAATCCTAC 59.618 46.154 0.00 0.00 46.51 3.18
4004 6108 2.627945 TGATAAATCCACCAGCACGTC 58.372 47.619 0.00 0.00 0.00 4.34
4035 6139 4.851558 GTCACAAGAAATGCAAACGGATAC 59.148 41.667 0.00 0.00 0.00 2.24
4109 6214 7.335673 TCATCCAAGTTTGCAACTCGATTAATA 59.664 33.333 0.00 0.00 41.91 0.98
4110 6215 5.957842 TCCAAGTTTGCAACTCGATTAAT 57.042 34.783 0.00 0.00 41.91 1.40
4111 6216 5.471797 TCATCCAAGTTTGCAACTCGATTAA 59.528 36.000 0.00 0.00 41.91 1.40
4152 6257 2.294074 GAGATGTACTCCGAGACTGCT 58.706 52.381 1.33 0.00 39.53 4.24
4153 6258 2.017782 TGAGATGTACTCCGAGACTGC 58.982 52.381 1.33 0.00 44.34 4.40
4182 6290 8.250332 TGGTTAATAATTTTCAAGCTGCCTTAG 58.750 33.333 0.00 0.00 0.00 2.18
4245 6358 2.762472 CGACTGTACTGTAACCGTACG 58.238 52.381 8.69 8.69 39.98 3.67
4264 6377 1.448540 GGACCCATCAGTCAGTGCG 60.449 63.158 0.00 0.00 38.59 5.34
4265 6378 0.392193 CTGGACCCATCAGTCAGTGC 60.392 60.000 0.00 0.00 38.59 4.40
4272 6385 2.567169 TCTGTACAACTGGACCCATCAG 59.433 50.000 0.00 0.00 38.16 2.90
4273 6386 2.615391 TCTGTACAACTGGACCCATCA 58.385 47.619 0.00 0.00 0.00 3.07
4274 6387 3.600388 CTTCTGTACAACTGGACCCATC 58.400 50.000 0.00 0.00 0.00 3.51
4275 6388 2.290323 GCTTCTGTACAACTGGACCCAT 60.290 50.000 0.00 0.00 0.00 4.00
4276 6389 1.071699 GCTTCTGTACAACTGGACCCA 59.928 52.381 0.00 0.00 0.00 4.51
4277 6390 1.348036 AGCTTCTGTACAACTGGACCC 59.652 52.381 0.00 0.00 0.00 4.46
4278 6391 2.841442 AGCTTCTGTACAACTGGACC 57.159 50.000 0.00 0.00 0.00 4.46
4279 6392 4.865365 GTGATAGCTTCTGTACAACTGGAC 59.135 45.833 0.00 0.00 0.00 4.02
4280 6393 4.380550 CGTGATAGCTTCTGTACAACTGGA 60.381 45.833 0.00 0.00 0.00 3.86
4281 6394 3.859961 CGTGATAGCTTCTGTACAACTGG 59.140 47.826 0.00 0.00 0.00 4.00
4282 6395 4.733850 TCGTGATAGCTTCTGTACAACTG 58.266 43.478 0.00 0.00 0.00 3.16
4283 6396 4.459685 ACTCGTGATAGCTTCTGTACAACT 59.540 41.667 0.00 0.00 0.00 3.16
4284 6397 4.734917 ACTCGTGATAGCTTCTGTACAAC 58.265 43.478 0.00 0.00 0.00 3.32
4285 6398 5.183331 AGAACTCGTGATAGCTTCTGTACAA 59.817 40.000 0.00 0.00 0.00 2.41
4286 6399 4.700692 AGAACTCGTGATAGCTTCTGTACA 59.299 41.667 0.00 0.00 0.00 2.90
4287 6400 5.031578 CAGAACTCGTGATAGCTTCTGTAC 58.968 45.833 0.00 0.00 34.03 2.90
4288 6401 4.700692 ACAGAACTCGTGATAGCTTCTGTA 59.299 41.667 14.87 0.00 41.15 2.74
4289 6402 3.508012 ACAGAACTCGTGATAGCTTCTGT 59.492 43.478 12.12 12.12 39.84 3.41
4619 6762 5.755861 AGAAATAGTTCGGAGCTTCAATAGC 59.244 40.000 0.00 0.00 43.47 2.97
4624 6767 3.055819 AGCAGAAATAGTTCGGAGCTTCA 60.056 43.478 7.25 0.00 37.72 3.02
4682 6832 3.050275 GCCGTCACCCTGCAAGTC 61.050 66.667 0.00 0.00 0.00 3.01
4737 6887 2.440599 GCCCTTCCAGCCCTTCAA 59.559 61.111 0.00 0.00 0.00 2.69
4783 6933 7.220741 TCTTCACCAGAAATATCTCTATCGG 57.779 40.000 0.00 0.00 32.03 4.18
4784 6934 7.328249 GCTTCTTCACCAGAAATATCTCTATCG 59.672 40.741 0.00 0.00 41.25 2.92
4785 6935 7.602265 GGCTTCTTCACCAGAAATATCTCTATC 59.398 40.741 0.00 0.00 41.25 2.08
4786 6936 7.071698 TGGCTTCTTCACCAGAAATATCTCTAT 59.928 37.037 0.00 0.00 41.25 1.98
4787 6937 6.384015 TGGCTTCTTCACCAGAAATATCTCTA 59.616 38.462 0.00 0.00 41.25 2.43
4789 6939 5.431765 TGGCTTCTTCACCAGAAATATCTC 58.568 41.667 0.00 0.00 41.25 2.75
4791 6941 7.992754 ATATGGCTTCTTCACCAGAAATATC 57.007 36.000 0.00 0.00 41.25 1.63
4793 6943 7.500227 CAGAATATGGCTTCTTCACCAGAAATA 59.500 37.037 2.20 0.00 41.25 1.40
4795 6945 5.649395 CAGAATATGGCTTCTTCACCAGAAA 59.351 40.000 2.20 0.00 41.25 2.52
4798 6948 4.774124 TCAGAATATGGCTTCTTCACCAG 58.226 43.478 2.20 0.00 39.88 4.00
4803 6953 7.579761 AATTCCTTCAGAATATGGCTTCTTC 57.420 36.000 0.00 0.00 44.75 2.87
4841 6991 6.666678 ACATTTCACACATTCAGATAGGGAT 58.333 36.000 0.00 0.00 0.00 3.85
4843 6993 6.558009 CAACATTTCACACATTCAGATAGGG 58.442 40.000 0.00 0.00 0.00 3.53
4844 6994 6.032094 GCAACATTTCACACATTCAGATAGG 58.968 40.000 0.00 0.00 0.00 2.57
4845 6995 6.614160 TGCAACATTTCACACATTCAGATAG 58.386 36.000 0.00 0.00 0.00 2.08
4852 7002 6.950545 CAAATCTTGCAACATTTCACACATT 58.049 32.000 9.43 0.00 0.00 2.71
4872 7032 5.009410 GTCAGCATCCTAATAGCAAGCAAAT 59.991 40.000 0.00 0.00 0.00 2.32
4873 7033 4.336433 GTCAGCATCCTAATAGCAAGCAAA 59.664 41.667 0.00 0.00 0.00 3.68
4878 7038 5.557576 ATCTGTCAGCATCCTAATAGCAA 57.442 39.130 0.00 0.00 0.00 3.91
4881 7041 6.204301 CCAACAATCTGTCAGCATCCTAATAG 59.796 42.308 0.00 0.00 0.00 1.73
4882 7042 6.057533 CCAACAATCTGTCAGCATCCTAATA 58.942 40.000 0.00 0.00 0.00 0.98
4891 7051 1.400242 GCGAACCAACAATCTGTCAGC 60.400 52.381 0.00 0.00 0.00 4.26
4895 7055 4.134563 AGTAAAGCGAACCAACAATCTGT 58.865 39.130 0.00 0.00 0.00 3.41
4896 7056 4.666655 CGAGTAAAGCGAACCAACAATCTG 60.667 45.833 0.00 0.00 0.00 2.90
4901 7061 2.512485 TCGAGTAAAGCGAACCAACA 57.488 45.000 0.00 0.00 34.45 3.33
4902 7062 2.991190 TCATCGAGTAAAGCGAACCAAC 59.009 45.455 0.00 0.00 41.52 3.77
4914 7075 2.984471 GCGGCGAATAAATCATCGAGTA 59.016 45.455 12.98 0.00 41.43 2.59
4917 7078 1.859383 TGCGGCGAATAAATCATCGA 58.141 45.000 12.98 0.00 41.43 3.59
4927 7088 0.168128 GTGCTTAGTTTGCGGCGAAT 59.832 50.000 12.98 0.00 0.00 3.34
4935 7096 3.888934 AGAAACGCATGTGCTTAGTTTG 58.111 40.909 6.08 0.00 39.32 2.93
4946 7107 1.197721 GGGTGTCTGAAGAAACGCATG 59.802 52.381 11.69 0.00 42.70 4.06
4950 7111 1.344763 AGGAGGGTGTCTGAAGAAACG 59.655 52.381 0.00 0.00 33.06 3.60
4961 7122 1.982958 ACGGTTCAATAAGGAGGGTGT 59.017 47.619 0.00 0.00 0.00 4.16
4962 7123 2.356135 CACGGTTCAATAAGGAGGGTG 58.644 52.381 0.00 0.00 0.00 4.61
4978 7139 2.631428 CCAACTCAACACGCACGG 59.369 61.111 0.00 0.00 0.00 4.94
4979 7140 2.052237 GCCAACTCAACACGCACG 60.052 61.111 0.00 0.00 0.00 5.34
4984 7145 0.388659 TGCAATGGCCAACTCAACAC 59.611 50.000 10.96 0.00 40.13 3.32
4986 7147 1.069049 ACTTGCAATGGCCAACTCAAC 59.931 47.619 10.96 0.00 40.13 3.18
4987 7148 1.412079 ACTTGCAATGGCCAACTCAA 58.588 45.000 10.96 12.89 40.13 3.02
4988 7149 2.161855 CTACTTGCAATGGCCAACTCA 58.838 47.619 10.96 4.57 40.13 3.41
4989 7150 1.135286 GCTACTTGCAATGGCCAACTC 60.135 52.381 10.96 1.38 42.31 3.01
4990 7151 0.890683 GCTACTTGCAATGGCCAACT 59.109 50.000 10.96 0.00 42.31 3.16
4991 7152 3.423848 GCTACTTGCAATGGCCAAC 57.576 52.632 10.96 2.55 42.31 3.77
5019 7187 3.501062 ACAAGCACATGAACTGTCATCAG 59.499 43.478 0.00 0.00 42.88 2.90
5043 7214 3.916776 GCAGAAATGCAAGCTTGTTAGTC 59.083 43.478 26.55 18.17 34.41 2.59
5053 7224 5.069516 ACCTATTATTGGGCAGAAATGCAAG 59.930 40.000 2.29 0.00 36.33 4.01
5081 7252 4.577246 ATCGCTCCGCCGAGAAGC 62.577 66.667 6.23 0.00 40.97 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.