Multiple sequence alignment - TraesCS5A01G307900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G307900 chr5A 100.000 2474 0 0 1 2474 520446398 520443925 0.000000e+00 4569
1 TraesCS5A01G307900 chr5A 97.204 465 11 2 1641 2104 704946148 704945685 0.000000e+00 785
2 TraesCS5A01G307900 chr5A 90.847 295 18 7 594 884 520464235 520463946 1.070000e-103 387
3 TraesCS5A01G307900 chr5A 85.315 286 34 5 14 297 520464799 520464520 3.110000e-74 289
4 TraesCS5A01G307900 chr5A 94.531 128 7 0 425 552 520464481 520464354 5.400000e-47 198
5 TraesCS5A01G307900 chr5B 94.292 911 33 10 596 1497 491077451 491076551 0.000000e+00 1376
6 TraesCS5A01G307900 chr5B 91.747 521 30 7 1 517 491078108 491077597 0.000000e+00 712
7 TraesCS5A01G307900 chr5B 90.909 77 6 1 2119 2195 491074982 491074907 4.350000e-18 102
8 TraesCS5A01G307900 chr5D 93.405 561 28 2 940 1497 409292210 409291656 0.000000e+00 822
9 TraesCS5A01G307900 chr5D 91.071 280 19 5 595 874 409295476 409295203 8.350000e-100 374
10 TraesCS5A01G307900 chr5D 85.921 277 31 5 23 297 409296010 409295740 3.110000e-74 289
11 TraesCS5A01G307900 chr5D 96.094 128 5 0 425 552 409295701 409295574 2.490000e-50 209
12 TraesCS5A01G307900 chr4A 97.210 466 9 4 1641 2104 609791995 609791532 0.000000e+00 785
13 TraesCS5A01G307900 chr4A 95.868 484 12 6 1635 2113 663199813 663199333 0.000000e+00 776
14 TraesCS5A01G307900 chr2B 97.204 465 10 2 1641 2104 705606974 705606512 0.000000e+00 784
15 TraesCS5A01G307900 chr3B 97.198 464 10 2 1641 2103 159958961 159958500 0.000000e+00 782
16 TraesCS5A01G307900 chr6B 96.996 466 10 3 1641 2104 476705876 476706339 0.000000e+00 780
17 TraesCS5A01G307900 chr3A 96.996 466 11 3 1640 2103 743550282 743550746 0.000000e+00 780
18 TraesCS5A01G307900 chr3A 95.816 478 17 2 1638 2114 557617479 557617954 0.000000e+00 769
19 TraesCS5A01G307900 chr1B 96.996 466 10 3 1641 2104 61487810 61488273 0.000000e+00 780


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G307900 chr5A 520443925 520446398 2473 True 4569.000000 4569 100.00000 1 2474 1 chr5A.!!$R1 2473
1 TraesCS5A01G307900 chr5A 520463946 520464799 853 True 291.333333 387 90.23100 14 884 3 chr5A.!!$R3 870
2 TraesCS5A01G307900 chr5B 491074907 491078108 3201 True 730.000000 1376 92.31600 1 2195 3 chr5B.!!$R1 2194
3 TraesCS5A01G307900 chr5D 409291656 409296010 4354 True 423.500000 822 91.62275 23 1497 4 chr5D.!!$R1 1474


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
202 206 0.250513 AGGGGCAGAAGTGATCGTTC 59.749 55.0 0.32 0.32 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2110 6352 0.038744 AAGTGGCATGTGGAGGAAGG 59.961 55.0 0.0 0.0 0.0 3.46 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
153 157 1.078848 ACCGCTCTCTGCATGTTCC 60.079 57.895 0.00 0.00 43.06 3.62
160 164 0.461548 CTCTGCATGTTCCGAGGCTA 59.538 55.000 0.00 0.00 0.00 3.93
202 206 0.250513 AGGGGCAGAAGTGATCGTTC 59.749 55.000 0.32 0.32 0.00 3.95
228 232 1.936547 GATTCTGCCTACTCCGCAAAG 59.063 52.381 0.00 0.00 35.40 2.77
299 305 0.809385 AGGGATGTCGTCAGTACACG 59.191 55.000 0.00 0.00 41.36 4.49
343 349 8.512138 AGTTAAGTGTGGCTGATTTATTACAAC 58.488 33.333 0.00 0.00 0.00 3.32
350 356 8.293867 TGTGGCTGATTTATTACAACTTTGTAC 58.706 33.333 1.18 0.00 42.84 2.90
395 401 9.485206 TGAATTAGCGATACTTATTTTAGGACC 57.515 33.333 0.00 0.00 27.94 4.46
413 420 4.971924 AGGACCAAGGAAGTAGCAGAATAT 59.028 41.667 0.00 0.00 0.00 1.28
527 534 1.971695 CGGCAGAGGGTTTGGGTTC 60.972 63.158 0.00 0.00 0.00 3.62
538 545 2.403259 GTTTGGGTTCGATGGCTTTTG 58.597 47.619 0.00 0.00 0.00 2.44
542 549 1.468914 GGGTTCGATGGCTTTTGAGAC 59.531 52.381 0.00 0.00 0.00 3.36
549 556 0.746204 TGGCTTTTGAGACGTGCACA 60.746 50.000 18.64 0.00 0.00 4.57
552 559 2.543653 GGCTTTTGAGACGTGCACAAAT 60.544 45.455 18.64 0.56 37.02 2.32
553 560 3.304391 GGCTTTTGAGACGTGCACAAATA 60.304 43.478 18.64 0.00 37.02 1.40
554 561 4.286910 GCTTTTGAGACGTGCACAAATAA 58.713 39.130 18.64 2.08 37.02 1.40
555 562 4.146443 GCTTTTGAGACGTGCACAAATAAC 59.854 41.667 18.64 3.40 37.02 1.89
556 563 3.513462 TTGAGACGTGCACAAATAACG 57.487 42.857 18.64 3.06 42.82 3.18
558 565 1.193650 GAGACGTGCACAAATAACGCA 59.806 47.619 18.64 0.00 40.90 5.24
744 880 0.537188 GCCATCTCCTCGACTTTCCA 59.463 55.000 0.00 0.00 0.00 3.53
876 1021 4.628333 TCGGATCGGATGTTTTTGTTACTC 59.372 41.667 0.00 0.00 0.00 2.59
880 1025 7.306632 CGGATCGGATGTTTTTGTTACTCTATC 60.307 40.741 0.00 0.00 0.00 2.08
920 4006 1.068748 CAACACCTCGTACGCACTACT 60.069 52.381 11.24 0.00 0.00 2.57
1143 4232 0.959372 ACGACTACCTGGTGTCCTCG 60.959 60.000 10.23 11.83 34.03 4.63
1430 4519 2.490903 AGCTCAACTGCTATTGCTTTGG 59.509 45.455 11.79 6.35 42.10 3.28
1437 4526 1.139520 CTATTGCTTTGGCGGCCAC 59.860 57.895 23.78 11.44 42.25 5.01
1503 4627 7.591006 TGTACTCGTTTTATGAAAGGCTTAG 57.409 36.000 0.00 0.00 32.21 2.18
1513 4637 5.551760 ATGAAAGGCTTAGATGTTTGTCG 57.448 39.130 0.00 0.00 0.00 4.35
1535 4659 6.852853 GTCGACATCTTGTTATATGCAAATGG 59.147 38.462 11.55 0.00 0.00 3.16
1537 4661 7.066887 TCGACATCTTGTTATATGCAAATGGTT 59.933 33.333 0.00 0.00 0.00 3.67
1549 4673 2.362077 GCAAATGGTTGGTGTGAACTCT 59.638 45.455 0.00 0.00 35.10 3.24
1589 5831 5.726397 TGTATAGCTAACATGTTTGTCCGT 58.274 37.500 17.78 5.66 34.06 4.69
1595 5837 3.451141 AACATGTTTGTCCGTTGCAAT 57.549 38.095 4.92 0.00 34.06 3.56
1598 5840 1.393603 TGTTTGTCCGTTGCAATGGA 58.606 45.000 32.20 32.20 41.69 3.41
1602 5844 1.974265 TGTCCGTTGCAATGGAAGAA 58.026 45.000 36.14 23.63 45.22 2.52
1603 5845 2.302260 TGTCCGTTGCAATGGAAGAAA 58.698 42.857 36.14 21.43 45.22 2.52
1621 5863 3.287482 AAAAACCACGGCAAGCATG 57.713 47.368 0.00 0.00 0.00 4.06
1622 5864 0.749649 AAAAACCACGGCAAGCATGA 59.250 45.000 0.00 0.00 0.00 3.07
1623 5865 0.031994 AAAACCACGGCAAGCATGAC 59.968 50.000 0.00 0.00 0.00 3.06
1624 5866 0.823356 AAACCACGGCAAGCATGACT 60.823 50.000 0.00 0.00 29.70 3.41
1625 5867 1.237285 AACCACGGCAAGCATGACTC 61.237 55.000 0.00 0.00 29.70 3.36
1626 5868 1.672030 CCACGGCAAGCATGACTCA 60.672 57.895 0.00 0.00 29.70 3.41
1629 5871 0.745845 ACGGCAAGCATGACTCATCC 60.746 55.000 0.00 0.00 29.70 3.51
1630 5872 1.442526 CGGCAAGCATGACTCATCCC 61.443 60.000 0.00 0.00 29.70 3.85
1631 5873 1.105759 GGCAAGCATGACTCATCCCC 61.106 60.000 0.00 0.00 0.00 4.81
1632 5874 0.106819 GCAAGCATGACTCATCCCCT 60.107 55.000 0.00 0.00 0.00 4.79
1633 5875 1.684248 GCAAGCATGACTCATCCCCTT 60.684 52.381 0.00 0.00 0.00 3.95
1635 5877 1.890552 AGCATGACTCATCCCCTTCT 58.109 50.000 0.00 0.00 0.00 2.85
1636 5878 1.767681 AGCATGACTCATCCCCTTCTC 59.232 52.381 0.00 0.00 0.00 2.87
1638 5880 1.419387 CATGACTCATCCCCTTCTCCC 59.581 57.143 0.00 0.00 0.00 4.30
1639 5881 0.719015 TGACTCATCCCCTTCTCCCT 59.281 55.000 0.00 0.00 0.00 4.20
1640 5882 1.343478 TGACTCATCCCCTTCTCCCTC 60.343 57.143 0.00 0.00 0.00 4.30
1641 5883 0.397816 ACTCATCCCCTTCTCCCTCG 60.398 60.000 0.00 0.00 0.00 4.63
1642 5884 0.105964 CTCATCCCCTTCTCCCTCGA 60.106 60.000 0.00 0.00 0.00 4.04
1643 5885 0.338467 TCATCCCCTTCTCCCTCGAA 59.662 55.000 0.00 0.00 0.00 3.71
1644 5886 1.204146 CATCCCCTTCTCCCTCGAAA 58.796 55.000 0.00 0.00 0.00 3.46
1645 5887 1.559682 CATCCCCTTCTCCCTCGAAAA 59.440 52.381 0.00 0.00 0.00 2.29
1646 5888 0.981943 TCCCCTTCTCCCTCGAAAAC 59.018 55.000 0.00 0.00 0.00 2.43
1647 5889 0.690762 CCCCTTCTCCCTCGAAAACA 59.309 55.000 0.00 0.00 0.00 2.83
1648 5890 1.282157 CCCCTTCTCCCTCGAAAACAT 59.718 52.381 0.00 0.00 0.00 2.71
1649 5891 2.359900 CCCTTCTCCCTCGAAAACATG 58.640 52.381 0.00 0.00 0.00 3.21
1650 5892 2.290323 CCCTTCTCCCTCGAAAACATGT 60.290 50.000 0.00 0.00 0.00 3.21
1651 5893 3.412386 CCTTCTCCCTCGAAAACATGTT 58.588 45.455 4.92 4.92 0.00 2.71
1652 5894 3.821033 CCTTCTCCCTCGAAAACATGTTT 59.179 43.478 18.13 18.13 0.00 2.83
1653 5895 4.278419 CCTTCTCCCTCGAAAACATGTTTT 59.722 41.667 31.40 31.40 44.59 2.43
1654 5896 5.472137 CCTTCTCCCTCGAAAACATGTTTTA 59.528 40.000 31.09 18.56 42.26 1.52
1655 5897 6.348540 CCTTCTCCCTCGAAAACATGTTTTAG 60.349 42.308 31.09 29.53 42.26 1.85
1656 5898 5.860611 TCTCCCTCGAAAACATGTTTTAGA 58.139 37.500 31.69 31.69 42.26 2.10
1660 5902 5.613358 CTCGAAAACATGTTTTAGAGCCT 57.387 39.130 38.17 20.25 46.80 4.58
1661 5903 6.721571 CTCGAAAACATGTTTTAGAGCCTA 57.278 37.500 38.17 22.48 46.80 3.93
1662 5904 7.308782 CTCGAAAACATGTTTTAGAGCCTAT 57.691 36.000 38.17 19.08 46.80 2.57
1663 5905 7.072177 TCGAAAACATGTTTTAGAGCCTATG 57.928 36.000 30.91 16.14 42.26 2.23
1664 5906 5.739161 CGAAAACATGTTTTAGAGCCTATGC 59.261 40.000 31.09 16.24 42.26 3.14
1665 5907 6.588719 AAAACATGTTTTAGAGCCTATGCA 57.411 33.333 30.29 0.00 40.61 3.96
1666 5908 5.567138 AACATGTTTTAGAGCCTATGCAC 57.433 39.130 4.92 0.00 41.13 4.57
1667 5909 3.947834 ACATGTTTTAGAGCCTATGCACC 59.052 43.478 0.00 0.00 41.13 5.01
1668 5910 2.999331 TGTTTTAGAGCCTATGCACCC 58.001 47.619 0.00 0.00 41.13 4.61
1669 5911 1.940613 GTTTTAGAGCCTATGCACCCG 59.059 52.381 0.00 0.00 41.13 5.28
1670 5912 0.468226 TTTAGAGCCTATGCACCCGG 59.532 55.000 0.00 0.00 41.13 5.73
1671 5913 1.407656 TTAGAGCCTATGCACCCGGG 61.408 60.000 22.25 22.25 41.13 5.73
1672 5914 2.599139 TAGAGCCTATGCACCCGGGT 62.599 60.000 24.16 24.16 41.13 5.28
1673 5915 2.041301 AGCCTATGCACCCGGGTA 60.041 61.111 29.72 13.39 41.13 3.69
1674 5916 2.110420 GCCTATGCACCCGGGTAC 59.890 66.667 29.72 23.40 37.47 3.34
1675 5917 2.440817 GCCTATGCACCCGGGTACT 61.441 63.158 29.72 16.37 37.47 2.73
1676 5918 1.979619 GCCTATGCACCCGGGTACTT 61.980 60.000 29.72 21.78 37.47 2.24
1677 5919 0.106149 CCTATGCACCCGGGTACTTC 59.894 60.000 29.72 16.18 0.00 3.01
1678 5920 1.120530 CTATGCACCCGGGTACTTCT 58.879 55.000 29.72 12.40 0.00 2.85
1679 5921 1.485066 CTATGCACCCGGGTACTTCTT 59.515 52.381 29.72 15.50 0.00 2.52
1680 5922 1.575419 ATGCACCCGGGTACTTCTTA 58.425 50.000 29.72 4.16 0.00 2.10
1681 5923 1.575419 TGCACCCGGGTACTTCTTAT 58.425 50.000 29.72 0.00 0.00 1.73
1682 5924 1.483415 TGCACCCGGGTACTTCTTATC 59.517 52.381 29.72 7.38 0.00 1.75
1683 5925 1.202615 GCACCCGGGTACTTCTTATCC 60.203 57.143 29.72 0.62 0.00 2.59
1684 5926 2.112998 CACCCGGGTACTTCTTATCCA 58.887 52.381 29.72 0.00 28.52 3.41
1685 5927 2.502538 CACCCGGGTACTTCTTATCCAA 59.497 50.000 29.72 0.00 28.52 3.53
1686 5928 2.502947 ACCCGGGTACTTCTTATCCAAC 59.497 50.000 29.13 0.00 28.52 3.77
1687 5929 2.158856 CCCGGGTACTTCTTATCCAACC 60.159 54.545 14.18 0.00 28.52 3.77
1688 5930 2.502538 CCGGGTACTTCTTATCCAACCA 59.497 50.000 0.00 0.00 28.52 3.67
1689 5931 3.528532 CGGGTACTTCTTATCCAACCAC 58.471 50.000 0.00 0.00 28.52 4.16
1690 5932 3.197116 CGGGTACTTCTTATCCAACCACT 59.803 47.826 0.00 0.00 28.52 4.00
1691 5933 4.679905 CGGGTACTTCTTATCCAACCACTC 60.680 50.000 0.00 0.00 28.52 3.51
1692 5934 4.224370 GGGTACTTCTTATCCAACCACTCA 59.776 45.833 0.00 0.00 29.98 3.41
1693 5935 5.104485 GGGTACTTCTTATCCAACCACTCAT 60.104 44.000 0.00 0.00 29.98 2.90
1694 5936 6.415573 GGTACTTCTTATCCAACCACTCATT 58.584 40.000 0.00 0.00 0.00 2.57
1695 5937 6.539103 GGTACTTCTTATCCAACCACTCATTC 59.461 42.308 0.00 0.00 0.00 2.67
1696 5938 5.501156 ACTTCTTATCCAACCACTCATTCC 58.499 41.667 0.00 0.00 0.00 3.01
1697 5939 5.251700 ACTTCTTATCCAACCACTCATTCCT 59.748 40.000 0.00 0.00 0.00 3.36
1698 5940 5.102953 TCTTATCCAACCACTCATTCCTG 57.897 43.478 0.00 0.00 0.00 3.86
1699 5941 2.134789 ATCCAACCACTCATTCCTGC 57.865 50.000 0.00 0.00 0.00 4.85
1700 5942 0.770499 TCCAACCACTCATTCCTGCA 59.230 50.000 0.00 0.00 0.00 4.41
1701 5943 1.355381 TCCAACCACTCATTCCTGCAT 59.645 47.619 0.00 0.00 0.00 3.96
1702 5944 1.747355 CCAACCACTCATTCCTGCATC 59.253 52.381 0.00 0.00 0.00 3.91
1703 5945 2.439409 CAACCACTCATTCCTGCATCA 58.561 47.619 0.00 0.00 0.00 3.07
1704 5946 2.119801 ACCACTCATTCCTGCATCAC 57.880 50.000 0.00 0.00 0.00 3.06
1705 5947 1.012086 CCACTCATTCCTGCATCACG 58.988 55.000 0.00 0.00 0.00 4.35
1706 5948 1.405933 CCACTCATTCCTGCATCACGA 60.406 52.381 0.00 0.00 0.00 4.35
1707 5949 2.558378 CACTCATTCCTGCATCACGAT 58.442 47.619 0.00 0.00 0.00 3.73
1708 5950 2.941064 CACTCATTCCTGCATCACGATT 59.059 45.455 0.00 0.00 0.00 3.34
1709 5951 3.002042 CACTCATTCCTGCATCACGATTC 59.998 47.826 0.00 0.00 0.00 2.52
1710 5952 2.204237 TCATTCCTGCATCACGATTCG 58.796 47.619 4.14 4.14 0.00 3.34
1711 5953 1.935873 CATTCCTGCATCACGATTCGT 59.064 47.619 5.75 5.75 42.36 3.85
1727 5969 6.842163 ACGATTCGTGCAAATAATTTTCTCT 58.158 32.000 11.56 0.00 39.18 3.10
1728 5970 7.305474 ACGATTCGTGCAAATAATTTTCTCTT 58.695 30.769 11.56 0.00 39.18 2.85
1729 5971 7.807907 ACGATTCGTGCAAATAATTTTCTCTTT 59.192 29.630 11.56 0.00 39.18 2.52
1730 5972 8.638565 CGATTCGTGCAAATAATTTTCTCTTTT 58.361 29.630 0.00 0.00 0.00 2.27
1772 6014 9.950680 AGAACATGTATTTGTACTTCAACTTTG 57.049 29.630 0.00 0.00 35.61 2.77
1773 6015 8.574196 AACATGTATTTGTACTTCAACTTTGC 57.426 30.769 0.00 0.00 35.61 3.68
1774 6016 7.711846 ACATGTATTTGTACTTCAACTTTGCA 58.288 30.769 0.00 0.00 35.61 4.08
1775 6017 7.862372 ACATGTATTTGTACTTCAACTTTGCAG 59.138 33.333 0.00 0.00 35.61 4.41
1776 6018 6.205784 TGTATTTGTACTTCAACTTTGCAGC 58.794 36.000 0.00 0.00 35.61 5.25
1777 6019 4.710423 TTTGTACTTCAACTTTGCAGCA 57.290 36.364 0.00 0.00 35.61 4.41
1778 6020 3.691049 TGTACTTCAACTTTGCAGCAC 57.309 42.857 0.00 0.00 0.00 4.40
1779 6021 3.013219 TGTACTTCAACTTTGCAGCACA 58.987 40.909 0.00 0.00 27.73 4.57
1780 6022 3.441922 TGTACTTCAACTTTGCAGCACAA 59.558 39.130 0.00 0.00 36.13 3.33
1781 6023 2.879826 ACTTCAACTTTGCAGCACAAC 58.120 42.857 0.00 0.00 38.23 3.32
1782 6024 2.230992 ACTTCAACTTTGCAGCACAACA 59.769 40.909 0.00 0.00 38.23 3.33
1783 6025 3.252400 CTTCAACTTTGCAGCACAACAA 58.748 40.909 0.00 0.00 38.23 2.83
1784 6026 3.309961 TCAACTTTGCAGCACAACAAA 57.690 38.095 0.00 0.00 38.23 2.83
1787 6029 1.930567 CTTTGCAGCACAACAAAGCT 58.069 45.000 0.00 0.00 44.32 3.74
1788 6030 2.273557 CTTTGCAGCACAACAAAGCTT 58.726 42.857 0.00 0.00 44.32 3.74
1789 6031 2.383368 TTGCAGCACAACAAAGCTTT 57.617 40.000 5.69 5.69 39.50 3.51
1790 6032 1.925229 TGCAGCACAACAAAGCTTTC 58.075 45.000 9.23 0.00 39.50 2.62
1791 6033 1.477700 TGCAGCACAACAAAGCTTTCT 59.522 42.857 9.23 0.00 39.50 2.52
1792 6034 2.687425 TGCAGCACAACAAAGCTTTCTA 59.313 40.909 9.23 0.00 39.50 2.10
1793 6035 3.318839 TGCAGCACAACAAAGCTTTCTAT 59.681 39.130 9.23 0.00 39.50 1.98
1794 6036 3.671928 GCAGCACAACAAAGCTTTCTATG 59.328 43.478 9.23 10.85 39.50 2.23
1795 6037 4.794003 GCAGCACAACAAAGCTTTCTATGT 60.794 41.667 9.23 11.49 39.50 2.29
1796 6038 5.562696 GCAGCACAACAAAGCTTTCTATGTA 60.563 40.000 9.23 0.00 39.50 2.29
1797 6039 6.082338 CAGCACAACAAAGCTTTCTATGTAG 58.918 40.000 9.23 10.01 39.50 2.74
1798 6040 5.997746 AGCACAACAAAGCTTTCTATGTAGA 59.002 36.000 9.23 0.00 38.01 2.59
1799 6041 6.486657 AGCACAACAAAGCTTTCTATGTAGAA 59.513 34.615 9.23 0.00 38.01 2.10
1800 6042 7.175641 AGCACAACAAAGCTTTCTATGTAGAAT 59.824 33.333 9.23 0.00 41.52 2.40
1801 6043 7.272084 GCACAACAAAGCTTTCTATGTAGAATG 59.728 37.037 9.23 3.07 41.52 2.67
1802 6044 8.292448 CACAACAAAGCTTTCTATGTAGAATGT 58.708 33.333 9.23 3.70 41.52 2.71
1803 6045 8.292448 ACAACAAAGCTTTCTATGTAGAATGTG 58.708 33.333 9.23 2.02 41.52 3.21
1804 6046 7.383102 ACAAAGCTTTCTATGTAGAATGTGG 57.617 36.000 9.23 0.00 41.52 4.17
1805 6047 6.375455 ACAAAGCTTTCTATGTAGAATGTGGG 59.625 38.462 9.23 0.00 41.52 4.61
1806 6048 5.957771 AGCTTTCTATGTAGAATGTGGGA 57.042 39.130 13.77 0.00 41.52 4.37
1807 6049 6.506538 AGCTTTCTATGTAGAATGTGGGAT 57.493 37.500 13.77 0.00 41.52 3.85
1808 6050 7.618019 AGCTTTCTATGTAGAATGTGGGATA 57.382 36.000 13.77 0.00 41.52 2.59
1809 6051 8.034313 AGCTTTCTATGTAGAATGTGGGATAA 57.966 34.615 13.77 0.00 41.52 1.75
1810 6052 8.494433 AGCTTTCTATGTAGAATGTGGGATAAA 58.506 33.333 13.77 0.00 41.52 1.40
1811 6053 9.120538 GCTTTCTATGTAGAATGTGGGATAAAA 57.879 33.333 13.77 0.00 41.52 1.52
1818 6060 8.786826 TGTAGAATGTGGGATAAAACTTACAG 57.213 34.615 0.00 0.00 0.00 2.74
1819 6061 8.598916 TGTAGAATGTGGGATAAAACTTACAGA 58.401 33.333 0.00 0.00 0.00 3.41
1820 6062 9.614792 GTAGAATGTGGGATAAAACTTACAGAT 57.385 33.333 0.00 0.00 0.00 2.90
1822 6064 9.533831 AGAATGTGGGATAAAACTTACAGATTT 57.466 29.630 0.00 0.00 0.00 2.17
1927 6169 9.566432 AAAGTCTGAAAGTTTATCTCACATTCT 57.434 29.630 0.00 0.00 33.76 2.40
1929 6171 9.868277 AGTCTGAAAGTTTATCTCACATTCTAG 57.132 33.333 0.00 0.00 33.76 2.43
1930 6172 9.646427 GTCTGAAAGTTTATCTCACATTCTAGT 57.354 33.333 0.00 0.00 33.76 2.57
1951 6193 9.199982 TCTAGTTACAAAGTTATGTTGTACTGC 57.800 33.333 0.00 0.00 40.30 4.40
1952 6194 7.795482 AGTTACAAAGTTATGTTGTACTGCA 57.205 32.000 0.00 0.00 40.30 4.41
1953 6195 8.215926 AGTTACAAAGTTATGTTGTACTGCAA 57.784 30.769 0.00 0.00 40.30 4.08
1954 6196 8.679100 AGTTACAAAGTTATGTTGTACTGCAAA 58.321 29.630 0.00 0.00 40.30 3.68
1955 6197 8.953990 GTTACAAAGTTATGTTGTACTGCAAAG 58.046 33.333 0.00 0.00 40.30 2.77
1956 6198 7.095695 ACAAAGTTATGTTGTACTGCAAAGT 57.904 32.000 0.00 0.00 37.44 2.66
1957 6199 7.543756 ACAAAGTTATGTTGTACTGCAAAGTT 58.456 30.769 0.00 0.00 37.44 2.66
1958 6200 8.032451 ACAAAGTTATGTTGTACTGCAAAGTTT 58.968 29.630 0.00 4.19 37.44 2.66
1959 6201 7.985634 AAGTTATGTTGTACTGCAAAGTTTG 57.014 32.000 11.41 11.41 39.03 2.93
1960 6202 7.328277 AGTTATGTTGTACTGCAAAGTTTGA 57.672 32.000 19.82 3.95 39.03 2.69
1961 6203 7.767261 AGTTATGTTGTACTGCAAAGTTTGAA 58.233 30.769 19.82 8.06 39.03 2.69
1962 6204 7.915397 AGTTATGTTGTACTGCAAAGTTTGAAG 59.085 33.333 20.32 20.32 42.36 3.02
1972 6214 7.992180 CTGCAAAGTTTGAAGTTTAAGACAT 57.008 32.000 19.82 0.00 31.28 3.06
1973 6215 7.754069 TGCAAAGTTTGAAGTTTAAGACATG 57.246 32.000 19.82 0.00 30.74 3.21
1974 6216 7.319646 TGCAAAGTTTGAAGTTTAAGACATGT 58.680 30.769 19.82 0.00 30.74 3.21
1975 6217 7.816995 TGCAAAGTTTGAAGTTTAAGACATGTT 59.183 29.630 19.82 0.00 30.74 2.71
1976 6218 8.655970 GCAAAGTTTGAAGTTTAAGACATGTTT 58.344 29.630 19.82 0.00 30.74 2.83
2027 6269 9.528489 AAATTCCATGTAATAAGGTAGTTGTGT 57.472 29.630 0.00 0.00 0.00 3.72
2029 6271 9.832445 ATTCCATGTAATAAGGTAGTTGTGTAG 57.168 33.333 0.00 0.00 0.00 2.74
2030 6272 7.270047 TCCATGTAATAAGGTAGTTGTGTAGC 58.730 38.462 0.00 0.00 0.00 3.58
2031 6273 7.045416 CCATGTAATAAGGTAGTTGTGTAGCA 58.955 38.462 0.00 0.00 0.00 3.49
2032 6274 7.011109 CCATGTAATAAGGTAGTTGTGTAGCAC 59.989 40.741 0.00 0.00 34.56 4.40
2033 6275 6.995364 TGTAATAAGGTAGTTGTGTAGCACA 58.005 36.000 0.00 0.00 43.02 4.57
2034 6276 7.094631 TGTAATAAGGTAGTTGTGTAGCACAG 58.905 38.462 2.17 0.00 45.39 3.66
2035 6277 5.995565 ATAAGGTAGTTGTGTAGCACAGA 57.004 39.130 2.17 0.00 45.39 3.41
2036 6278 4.891992 AAGGTAGTTGTGTAGCACAGAT 57.108 40.909 2.17 0.00 45.39 2.90
2037 6279 4.457834 AGGTAGTTGTGTAGCACAGATC 57.542 45.455 2.17 0.00 45.39 2.75
2038 6280 4.090090 AGGTAGTTGTGTAGCACAGATCT 58.910 43.478 2.17 0.00 45.39 2.75
2039 6281 4.528596 AGGTAGTTGTGTAGCACAGATCTT 59.471 41.667 0.00 0.00 45.39 2.40
2040 6282 5.715279 AGGTAGTTGTGTAGCACAGATCTTA 59.285 40.000 0.00 0.00 45.39 2.10
2041 6283 6.210784 AGGTAGTTGTGTAGCACAGATCTTAA 59.789 38.462 0.00 0.00 45.39 1.85
2042 6284 6.872020 GGTAGTTGTGTAGCACAGATCTTAAA 59.128 38.462 0.00 0.00 45.39 1.52
2043 6285 7.063544 GGTAGTTGTGTAGCACAGATCTTAAAG 59.936 40.741 0.00 0.00 45.39 1.85
2044 6286 5.409826 AGTTGTGTAGCACAGATCTTAAAGC 59.590 40.000 0.00 0.00 45.39 3.51
2045 6287 4.893608 TGTGTAGCACAGATCTTAAAGCA 58.106 39.130 0.00 0.00 39.62 3.91
2046 6288 5.304778 TGTGTAGCACAGATCTTAAAGCAA 58.695 37.500 0.00 0.00 39.62 3.91
2047 6289 5.179368 TGTGTAGCACAGATCTTAAAGCAAC 59.821 40.000 0.00 0.00 39.62 4.17
2048 6290 4.388773 TGTAGCACAGATCTTAAAGCAACG 59.611 41.667 0.00 0.00 0.00 4.10
2049 6291 3.403038 AGCACAGATCTTAAAGCAACGT 58.597 40.909 0.00 0.00 0.00 3.99
2050 6292 3.815401 AGCACAGATCTTAAAGCAACGTT 59.185 39.130 0.00 0.00 0.00 3.99
2051 6293 3.908382 GCACAGATCTTAAAGCAACGTTG 59.092 43.478 23.90 23.90 0.00 4.10
2052 6294 4.466828 CACAGATCTTAAAGCAACGTTGG 58.533 43.478 28.33 11.60 0.00 3.77
2053 6295 4.213270 CACAGATCTTAAAGCAACGTTGGA 59.787 41.667 28.33 16.41 0.00 3.53
2054 6296 4.452455 ACAGATCTTAAAGCAACGTTGGAG 59.548 41.667 28.33 5.03 0.00 3.86
2055 6297 4.452455 CAGATCTTAAAGCAACGTTGGAGT 59.548 41.667 28.33 6.19 0.00 3.85
2056 6298 4.452455 AGATCTTAAAGCAACGTTGGAGTG 59.548 41.667 28.33 5.03 0.00 3.51
2057 6299 2.289547 TCTTAAAGCAACGTTGGAGTGC 59.710 45.455 28.33 15.47 0.00 4.40
2058 6300 1.961793 TAAAGCAACGTTGGAGTGCT 58.038 45.000 28.33 17.58 37.45 4.40
2059 6301 1.961793 AAAGCAACGTTGGAGTGCTA 58.038 45.000 28.33 0.00 35.15 3.49
2060 6302 1.961793 AAGCAACGTTGGAGTGCTAA 58.038 45.000 28.33 0.00 35.15 3.09
2061 6303 1.512926 AGCAACGTTGGAGTGCTAAG 58.487 50.000 28.33 0.38 33.70 2.18
2062 6304 1.070134 AGCAACGTTGGAGTGCTAAGA 59.930 47.619 28.33 0.00 33.70 2.10
2063 6305 2.076863 GCAACGTTGGAGTGCTAAGAT 58.923 47.619 28.33 0.00 0.00 2.40
2064 6306 3.056107 AGCAACGTTGGAGTGCTAAGATA 60.056 43.478 28.33 0.00 33.70 1.98
2065 6307 3.307242 GCAACGTTGGAGTGCTAAGATAG 59.693 47.826 28.33 0.00 0.00 2.08
2066 6308 4.495422 CAACGTTGGAGTGCTAAGATAGT 58.505 43.478 20.71 0.00 0.00 2.12
2067 6309 4.111375 ACGTTGGAGTGCTAAGATAGTG 57.889 45.455 0.00 0.00 0.00 2.74
2068 6310 3.762288 ACGTTGGAGTGCTAAGATAGTGA 59.238 43.478 0.00 0.00 0.00 3.41
2069 6311 4.142359 ACGTTGGAGTGCTAAGATAGTGAG 60.142 45.833 0.00 0.00 0.00 3.51
2070 6312 4.688021 GTTGGAGTGCTAAGATAGTGAGG 58.312 47.826 0.00 0.00 0.00 3.86
2071 6313 2.695666 TGGAGTGCTAAGATAGTGAGGC 59.304 50.000 0.00 0.00 0.00 4.70
2072 6314 2.036604 GGAGTGCTAAGATAGTGAGGCC 59.963 54.545 0.00 0.00 0.00 5.19
2073 6315 2.036604 GAGTGCTAAGATAGTGAGGCCC 59.963 54.545 0.00 0.00 0.00 5.80
2074 6316 1.040646 TGCTAAGATAGTGAGGCCCG 58.959 55.000 0.00 0.00 0.00 6.13
2075 6317 0.318762 GCTAAGATAGTGAGGCCCGG 59.681 60.000 0.00 0.00 0.00 5.73
2076 6318 0.969894 CTAAGATAGTGAGGCCCGGG 59.030 60.000 19.09 19.09 0.00 5.73
2077 6319 0.263765 TAAGATAGTGAGGCCCGGGT 59.736 55.000 24.63 1.57 0.00 5.28
2078 6320 1.338136 AAGATAGTGAGGCCCGGGTG 61.338 60.000 24.63 0.00 0.00 4.61
2079 6321 3.462199 GATAGTGAGGCCCGGGTGC 62.462 68.421 24.63 12.43 0.00 5.01
2082 6324 2.882403 TAGTGAGGCCCGGGTGCATA 62.882 60.000 24.63 5.26 0.00 3.14
2083 6325 3.012119 TGAGGCCCGGGTGCATAA 61.012 61.111 24.63 0.00 0.00 1.90
2084 6326 2.203209 GAGGCCCGGGTGCATAAG 60.203 66.667 24.63 0.00 0.00 1.73
2085 6327 4.506255 AGGCCCGGGTGCATAAGC 62.506 66.667 24.63 4.14 42.57 3.09
2086 6328 4.506255 GGCCCGGGTGCATAAGCT 62.506 66.667 24.63 0.00 42.74 3.74
2087 6329 2.902343 GCCCGGGTGCATAAGCTC 60.902 66.667 24.63 0.00 42.74 4.09
2088 6330 2.589540 CCCGGGTGCATAAGCTCA 59.410 61.111 14.18 0.00 42.74 4.26
2089 6331 1.819632 CCCGGGTGCATAAGCTCAC 60.820 63.158 14.18 0.00 42.74 3.51
2090 6332 1.078497 CCGGGTGCATAAGCTCACA 60.078 57.895 5.72 0.00 42.74 3.58
2091 6333 0.676466 CCGGGTGCATAAGCTCACAA 60.676 55.000 5.72 0.00 42.74 3.33
2092 6334 1.164411 CGGGTGCATAAGCTCACAAA 58.836 50.000 5.72 0.00 42.74 2.83
2093 6335 1.539388 CGGGTGCATAAGCTCACAAAA 59.461 47.619 5.72 0.00 42.74 2.44
2094 6336 2.164219 CGGGTGCATAAGCTCACAAAAT 59.836 45.455 5.72 0.00 42.74 1.82
2095 6337 3.731867 CGGGTGCATAAGCTCACAAAATC 60.732 47.826 5.72 0.00 42.74 2.17
2096 6338 3.445096 GGGTGCATAAGCTCACAAAATCT 59.555 43.478 5.72 0.00 42.74 2.40
2097 6339 4.418392 GGTGCATAAGCTCACAAAATCTG 58.582 43.478 5.72 0.00 42.74 2.90
2098 6340 3.855950 GTGCATAAGCTCACAAAATCTGC 59.144 43.478 0.00 0.00 42.74 4.26
2099 6341 3.506844 TGCATAAGCTCACAAAATCTGCA 59.493 39.130 0.00 0.00 42.74 4.41
2100 6342 4.158949 TGCATAAGCTCACAAAATCTGCAT 59.841 37.500 0.00 0.00 42.74 3.96
2101 6343 5.107133 GCATAAGCTCACAAAATCTGCATT 58.893 37.500 0.00 0.00 37.91 3.56
2102 6344 5.231568 GCATAAGCTCACAAAATCTGCATTC 59.768 40.000 0.00 0.00 37.91 2.67
2103 6345 3.863142 AGCTCACAAAATCTGCATTCC 57.137 42.857 0.00 0.00 0.00 3.01
2104 6346 2.494870 AGCTCACAAAATCTGCATTCCC 59.505 45.455 0.00 0.00 0.00 3.97
2105 6347 2.417787 GCTCACAAAATCTGCATTCCCC 60.418 50.000 0.00 0.00 0.00 4.81
2106 6348 3.094572 CTCACAAAATCTGCATTCCCCT 58.905 45.455 0.00 0.00 0.00 4.79
2107 6349 3.091545 TCACAAAATCTGCATTCCCCTC 58.908 45.455 0.00 0.00 0.00 4.30
2108 6350 2.167075 CACAAAATCTGCATTCCCCTCC 59.833 50.000 0.00 0.00 0.00 4.30
2109 6351 1.758862 CAAAATCTGCATTCCCCTCCC 59.241 52.381 0.00 0.00 0.00 4.30
2110 6352 0.262876 AAATCTGCATTCCCCTCCCC 59.737 55.000 0.00 0.00 0.00 4.81
2111 6353 1.659035 AATCTGCATTCCCCTCCCCC 61.659 60.000 0.00 0.00 0.00 5.40
2112 6354 2.590411 ATCTGCATTCCCCTCCCCCT 62.590 60.000 0.00 0.00 0.00 4.79
2113 6355 2.204448 TGCATTCCCCTCCCCCTT 60.204 61.111 0.00 0.00 0.00 3.95
2114 6356 2.290021 CTGCATTCCCCTCCCCCTTC 62.290 65.000 0.00 0.00 0.00 3.46
2115 6357 3.074907 GCATTCCCCTCCCCCTTCC 62.075 68.421 0.00 0.00 0.00 3.46
2116 6358 1.309102 CATTCCCCTCCCCCTTCCT 60.309 63.158 0.00 0.00 0.00 3.36
2117 6359 1.006227 ATTCCCCTCCCCCTTCCTC 59.994 63.158 0.00 0.00 0.00 3.71
2133 6375 1.985159 TCCTCCACATGCCACTTTACT 59.015 47.619 0.00 0.00 0.00 2.24
2134 6376 2.027192 TCCTCCACATGCCACTTTACTC 60.027 50.000 0.00 0.00 0.00 2.59
2135 6377 2.359900 CTCCACATGCCACTTTACTCC 58.640 52.381 0.00 0.00 0.00 3.85
2136 6378 1.086696 CCACATGCCACTTTACTCCG 58.913 55.000 0.00 0.00 0.00 4.63
2141 6383 0.753867 TGCCACTTTACTCCGTGTCA 59.246 50.000 0.00 0.00 0.00 3.58
2172 6414 1.974957 TCTTTTCCATCCTCGGTGACA 59.025 47.619 0.00 0.00 0.00 3.58
2180 6422 1.663702 CCTCGGTGACAACGGTGAC 60.664 63.158 13.91 0.00 0.00 3.67
2189 6431 0.179067 ACAACGGTGACCACGATGTT 60.179 50.000 7.88 0.00 43.27 2.71
2195 6437 3.194861 CGGTGACCACGATGTTCATATT 58.805 45.455 1.11 0.00 0.00 1.28
2196 6438 3.001228 CGGTGACCACGATGTTCATATTG 59.999 47.826 1.11 0.00 0.00 1.90
2197 6439 3.938963 GGTGACCACGATGTTCATATTGT 59.061 43.478 0.00 0.00 0.00 2.71
2198 6440 4.394920 GGTGACCACGATGTTCATATTGTT 59.605 41.667 0.00 0.00 0.00 2.83
2199 6441 5.583061 GGTGACCACGATGTTCATATTGTTA 59.417 40.000 0.00 0.00 0.00 2.41
2200 6442 6.092944 GGTGACCACGATGTTCATATTGTTAA 59.907 38.462 0.00 0.00 0.00 2.01
2201 6443 7.361371 GGTGACCACGATGTTCATATTGTTAAA 60.361 37.037 0.00 0.00 0.00 1.52
2202 6444 7.480542 GTGACCACGATGTTCATATTGTTAAAC 59.519 37.037 0.00 0.00 0.00 2.01
2203 6445 7.173390 TGACCACGATGTTCATATTGTTAAACA 59.827 33.333 0.00 0.00 36.19 2.83
2204 6446 7.877003 ACCACGATGTTCATATTGTTAAACAA 58.123 30.769 0.00 0.00 42.95 2.83
2235 6477 9.630098 ATCTACAATATTGTATAAACCGTACGG 57.370 33.333 32.22 32.22 42.26 4.02
2236 6478 8.629158 TCTACAATATTGTATAAACCGTACGGT 58.371 33.333 33.77 33.77 45.40 4.83
2237 6479 9.891828 CTACAATATTGTATAAACCGTACGGTA 57.108 33.333 38.27 25.32 44.06 4.02
2239 6481 9.762933 ACAATATTGTATAAACCGTACGGTATT 57.237 29.630 38.27 31.10 43.39 1.89
2252 6494 7.479070 CCGTACGGTATTGTATAAATCGTAC 57.521 40.000 26.39 17.12 44.19 3.67
2253 6495 7.075121 CCGTACGGTATTGTATAAATCGTACA 58.925 38.462 26.39 0.00 46.37 2.90
2254 6496 7.269084 CCGTACGGTATTGTATAAATCGTACAG 59.731 40.741 26.39 17.28 46.37 2.74
2255 6497 7.798516 CGTACGGTATTGTATAAATCGTACAGT 59.201 37.037 21.99 11.12 46.37 3.55
2256 6498 9.450807 GTACGGTATTGTATAAATCGTACAGTT 57.549 33.333 19.73 0.00 45.77 3.16
2295 6537 9.912634 AATGTTTGAGTTTGTTGAATAGTATGG 57.087 29.630 0.00 0.00 0.00 2.74
2296 6538 8.458573 TGTTTGAGTTTGTTGAATAGTATGGT 57.541 30.769 0.00 0.00 0.00 3.55
2297 6539 8.908903 TGTTTGAGTTTGTTGAATAGTATGGTT 58.091 29.630 0.00 0.00 0.00 3.67
2298 6540 9.744468 GTTTGAGTTTGTTGAATAGTATGGTTT 57.256 29.630 0.00 0.00 0.00 3.27
2323 6565 9.619316 TTATTTTTGTCTCATCATTTACAACCG 57.381 29.630 0.00 0.00 31.92 4.44
2324 6566 6.627395 TTTTGTCTCATCATTTACAACCGT 57.373 33.333 0.00 0.00 31.92 4.83
2325 6567 6.627395 TTTGTCTCATCATTTACAACCGTT 57.373 33.333 0.00 0.00 31.92 4.44
2326 6568 6.627395 TTGTCTCATCATTTACAACCGTTT 57.373 33.333 0.00 0.00 0.00 3.60
2327 6569 6.627395 TGTCTCATCATTTACAACCGTTTT 57.373 33.333 0.00 0.00 0.00 2.43
2328 6570 7.731882 TGTCTCATCATTTACAACCGTTTTA 57.268 32.000 0.00 0.00 0.00 1.52
2329 6571 8.330466 TGTCTCATCATTTACAACCGTTTTAT 57.670 30.769 0.00 0.00 0.00 1.40
2330 6572 8.788806 TGTCTCATCATTTACAACCGTTTTATT 58.211 29.630 0.00 0.00 0.00 1.40
2331 6573 9.620660 GTCTCATCATTTACAACCGTTTTATTT 57.379 29.630 0.00 0.00 0.00 1.40
2334 6576 9.562583 TCATCATTTACAACCGTTTTATTTAGC 57.437 29.630 0.00 0.00 0.00 3.09
2335 6577 9.567848 CATCATTTACAACCGTTTTATTTAGCT 57.432 29.630 0.00 0.00 0.00 3.32
2336 6578 8.958175 TCATTTACAACCGTTTTATTTAGCTG 57.042 30.769 0.00 0.00 0.00 4.24
2337 6579 8.024285 TCATTTACAACCGTTTTATTTAGCTGG 58.976 33.333 0.00 0.00 0.00 4.85
2338 6580 6.880942 TTACAACCGTTTTATTTAGCTGGT 57.119 33.333 0.00 0.00 0.00 4.00
2339 6581 5.777850 ACAACCGTTTTATTTAGCTGGTT 57.222 34.783 0.00 0.00 38.69 3.67
2340 6582 6.151663 ACAACCGTTTTATTTAGCTGGTTT 57.848 33.333 0.00 0.00 36.15 3.27
2341 6583 6.575267 ACAACCGTTTTATTTAGCTGGTTTT 58.425 32.000 0.00 0.00 36.15 2.43
2342 6584 7.714703 ACAACCGTTTTATTTAGCTGGTTTTA 58.285 30.769 0.00 0.00 36.15 1.52
2343 6585 8.361889 ACAACCGTTTTATTTAGCTGGTTTTAT 58.638 29.630 0.00 0.00 36.15 1.40
2344 6586 9.198837 CAACCGTTTTATTTAGCTGGTTTTATT 57.801 29.630 0.00 0.00 36.15 1.40
2345 6587 9.767228 AACCGTTTTATTTAGCTGGTTTTATTT 57.233 25.926 0.00 0.00 34.76 1.40
2346 6588 9.414295 ACCGTTTTATTTAGCTGGTTTTATTTC 57.586 29.630 0.00 0.00 0.00 2.17
2347 6589 8.580431 CCGTTTTATTTAGCTGGTTTTATTTCG 58.420 33.333 0.00 0.00 0.00 3.46
2348 6590 9.120422 CGTTTTATTTAGCTGGTTTTATTTCGT 57.880 29.630 0.00 0.00 0.00 3.85
2352 6594 7.681939 ATTTAGCTGGTTTTATTTCGTCTCA 57.318 32.000 0.00 0.00 0.00 3.27
2353 6595 7.681939 TTTAGCTGGTTTTATTTCGTCTCAT 57.318 32.000 0.00 0.00 0.00 2.90
2354 6596 5.803020 AGCTGGTTTTATTTCGTCTCATC 57.197 39.130 0.00 0.00 0.00 2.92
2355 6597 4.636206 AGCTGGTTTTATTTCGTCTCATCC 59.364 41.667 0.00 0.00 0.00 3.51
2356 6598 4.636206 GCTGGTTTTATTTCGTCTCATCCT 59.364 41.667 0.00 0.00 0.00 3.24
2357 6599 5.220681 GCTGGTTTTATTTCGTCTCATCCTC 60.221 44.000 0.00 0.00 0.00 3.71
2358 6600 5.183228 TGGTTTTATTTCGTCTCATCCTCC 58.817 41.667 0.00 0.00 0.00 4.30
2359 6601 5.183228 GGTTTTATTTCGTCTCATCCTCCA 58.817 41.667 0.00 0.00 0.00 3.86
2360 6602 5.064834 GGTTTTATTTCGTCTCATCCTCCAC 59.935 44.000 0.00 0.00 0.00 4.02
2361 6603 2.990066 ATTTCGTCTCATCCTCCACC 57.010 50.000 0.00 0.00 0.00 4.61
2362 6604 1.639722 TTTCGTCTCATCCTCCACCA 58.360 50.000 0.00 0.00 0.00 4.17
2363 6605 0.895530 TTCGTCTCATCCTCCACCAC 59.104 55.000 0.00 0.00 0.00 4.16
2364 6606 0.970937 TCGTCTCATCCTCCACCACC 60.971 60.000 0.00 0.00 0.00 4.61
2365 6607 1.908483 GTCTCATCCTCCACCACCC 59.092 63.158 0.00 0.00 0.00 4.61
2366 6608 1.306997 TCTCATCCTCCACCACCCC 60.307 63.158 0.00 0.00 0.00 4.95
2367 6609 2.286121 TCATCCTCCACCACCCCC 60.286 66.667 0.00 0.00 0.00 5.40
2368 6610 2.286425 CATCCTCCACCACCCCCT 60.286 66.667 0.00 0.00 0.00 4.79
2369 6611 1.004230 CATCCTCCACCACCCCCTA 59.996 63.158 0.00 0.00 0.00 3.53
2370 6612 1.004361 ATCCTCCACCACCCCCTAC 59.996 63.158 0.00 0.00 0.00 3.18
2371 6613 1.537478 ATCCTCCACCACCCCCTACT 61.537 60.000 0.00 0.00 0.00 2.57
2372 6614 1.229853 CCTCCACCACCCCCTACTT 60.230 63.158 0.00 0.00 0.00 2.24
2373 6615 0.043637 CCTCCACCACCCCCTACTTA 59.956 60.000 0.00 0.00 0.00 2.24
2374 6616 1.556238 CCTCCACCACCCCCTACTTAA 60.556 57.143 0.00 0.00 0.00 1.85
2375 6617 2.271777 CTCCACCACCCCCTACTTAAA 58.728 52.381 0.00 0.00 0.00 1.52
2376 6618 2.645797 CTCCACCACCCCCTACTTAAAA 59.354 50.000 0.00 0.00 0.00 1.52
2377 6619 3.062129 TCCACCACCCCCTACTTAAAAA 58.938 45.455 0.00 0.00 0.00 1.94
2394 6636 1.616159 AAAAACACTGTATGCCGCCT 58.384 45.000 0.00 0.00 0.00 5.52
2395 6637 1.165270 AAAACACTGTATGCCGCCTC 58.835 50.000 0.00 0.00 0.00 4.70
2396 6638 0.324943 AAACACTGTATGCCGCCTCT 59.675 50.000 0.00 0.00 0.00 3.69
2397 6639 0.108138 AACACTGTATGCCGCCTCTC 60.108 55.000 0.00 0.00 0.00 3.20
2398 6640 1.227380 CACTGTATGCCGCCTCTCC 60.227 63.158 0.00 0.00 0.00 3.71
2399 6641 1.381872 ACTGTATGCCGCCTCTCCT 60.382 57.895 0.00 0.00 0.00 3.69
2400 6642 1.365633 CTGTATGCCGCCTCTCCTC 59.634 63.158 0.00 0.00 0.00 3.71
2401 6643 1.075970 TGTATGCCGCCTCTCCTCT 60.076 57.895 0.00 0.00 0.00 3.69
2402 6644 1.109920 TGTATGCCGCCTCTCCTCTC 61.110 60.000 0.00 0.00 0.00 3.20
2403 6645 1.899054 TATGCCGCCTCTCCTCTCG 60.899 63.158 0.00 0.00 0.00 4.04
2404 6646 2.339275 TATGCCGCCTCTCCTCTCGA 62.339 60.000 0.00 0.00 0.00 4.04
2405 6647 2.909965 GCCGCCTCTCCTCTCGAT 60.910 66.667 0.00 0.00 0.00 3.59
2406 6648 2.914908 GCCGCCTCTCCTCTCGATC 61.915 68.421 0.00 0.00 0.00 3.69
2407 6649 2.265182 CCGCCTCTCCTCTCGATCC 61.265 68.421 0.00 0.00 0.00 3.36
2408 6650 1.527148 CGCCTCTCCTCTCGATCCA 60.527 63.158 0.00 0.00 0.00 3.41
2409 6651 1.791103 CGCCTCTCCTCTCGATCCAC 61.791 65.000 0.00 0.00 0.00 4.02
2410 6652 1.460273 GCCTCTCCTCTCGATCCACC 61.460 65.000 0.00 0.00 0.00 4.61
2411 6653 0.825840 CCTCTCCTCTCGATCCACCC 60.826 65.000 0.00 0.00 0.00 4.61
2412 6654 0.825840 CTCTCCTCTCGATCCACCCC 60.826 65.000 0.00 0.00 0.00 4.95
2413 6655 1.834822 CTCCTCTCGATCCACCCCC 60.835 68.421 0.00 0.00 0.00 5.40
2414 6656 2.283809 CCTCTCGATCCACCCCCT 59.716 66.667 0.00 0.00 0.00 4.79
2415 6657 1.834822 CCTCTCGATCCACCCCCTC 60.835 68.421 0.00 0.00 0.00 4.30
2416 6658 1.231641 CTCTCGATCCACCCCCTCT 59.768 63.158 0.00 0.00 0.00 3.69
2417 6659 1.075970 TCTCGATCCACCCCCTCTG 60.076 63.158 0.00 0.00 0.00 3.35
2418 6660 2.041922 TCGATCCACCCCCTCTGG 60.042 66.667 0.00 0.00 0.00 3.86
2419 6661 3.866582 CGATCCACCCCCTCTGGC 61.867 72.222 0.00 0.00 0.00 4.85
2420 6662 2.367512 GATCCACCCCCTCTGGCT 60.368 66.667 0.00 0.00 0.00 4.75
2421 6663 1.074471 GATCCACCCCCTCTGGCTA 60.074 63.158 0.00 0.00 0.00 3.93
2422 6664 1.384643 ATCCACCCCCTCTGGCTAC 60.385 63.158 0.00 0.00 0.00 3.58
2423 6665 2.916553 ATCCACCCCCTCTGGCTACC 62.917 65.000 0.00 0.00 0.00 3.18
2424 6666 2.285368 CACCCCCTCTGGCTACCA 60.285 66.667 0.00 0.00 0.00 3.25
2425 6667 2.285442 ACCCCCTCTGGCTACCAC 60.285 66.667 0.00 0.00 0.00 4.16
2426 6668 3.090532 CCCCCTCTGGCTACCACC 61.091 72.222 0.00 0.00 0.00 4.61
2427 6669 2.041265 CCCCTCTGGCTACCACCT 59.959 66.667 0.00 0.00 0.00 4.00
2428 6670 2.066999 CCCCTCTGGCTACCACCTC 61.067 68.421 0.00 0.00 0.00 3.85
2429 6671 2.427245 CCCTCTGGCTACCACCTCG 61.427 68.421 0.00 0.00 0.00 4.63
2430 6672 2.496817 CTCTGGCTACCACCTCGC 59.503 66.667 0.00 0.00 0.00 5.03
2431 6673 2.037367 TCTGGCTACCACCTCGCT 59.963 61.111 0.00 0.00 0.00 4.93
2432 6674 2.010582 CTCTGGCTACCACCTCGCTC 62.011 65.000 0.00 0.00 0.00 5.03
2433 6675 2.037367 TGGCTACCACCTCGCTCT 59.963 61.111 0.00 0.00 0.00 4.09
2434 6676 1.608717 CTGGCTACCACCTCGCTCTT 61.609 60.000 0.00 0.00 0.00 2.85
2435 6677 1.192146 TGGCTACCACCTCGCTCTTT 61.192 55.000 0.00 0.00 0.00 2.52
2436 6678 0.460459 GGCTACCACCTCGCTCTTTC 60.460 60.000 0.00 0.00 0.00 2.62
2437 6679 0.460459 GCTACCACCTCGCTCTTTCC 60.460 60.000 0.00 0.00 0.00 3.13
2438 6680 0.175989 CTACCACCTCGCTCTTTCCC 59.824 60.000 0.00 0.00 0.00 3.97
2439 6681 0.252103 TACCACCTCGCTCTTTCCCT 60.252 55.000 0.00 0.00 0.00 4.20
2440 6682 1.219393 CCACCTCGCTCTTTCCCTC 59.781 63.158 0.00 0.00 0.00 4.30
2441 6683 1.219393 CACCTCGCTCTTTCCCTCC 59.781 63.158 0.00 0.00 0.00 4.30
2442 6684 1.079438 ACCTCGCTCTTTCCCTCCT 59.921 57.895 0.00 0.00 0.00 3.69
2443 6685 0.973496 ACCTCGCTCTTTCCCTCCTC 60.973 60.000 0.00 0.00 0.00 3.71
2444 6686 0.686112 CCTCGCTCTTTCCCTCCTCT 60.686 60.000 0.00 0.00 0.00 3.69
2445 6687 0.744281 CTCGCTCTTTCCCTCCTCTC 59.256 60.000 0.00 0.00 0.00 3.20
2446 6688 0.039764 TCGCTCTTTCCCTCCTCTCA 59.960 55.000 0.00 0.00 0.00 3.27
2447 6689 0.174617 CGCTCTTTCCCTCCTCTCAC 59.825 60.000 0.00 0.00 0.00 3.51
2448 6690 0.174617 GCTCTTTCCCTCCTCTCACG 59.825 60.000 0.00 0.00 0.00 4.35
2449 6691 0.174617 CTCTTTCCCTCCTCTCACGC 59.825 60.000 0.00 0.00 0.00 5.34
2450 6692 0.251832 TCTTTCCCTCCTCTCACGCT 60.252 55.000 0.00 0.00 0.00 5.07
2451 6693 0.174617 CTTTCCCTCCTCTCACGCTC 59.825 60.000 0.00 0.00 0.00 5.03
2452 6694 1.258445 TTTCCCTCCTCTCACGCTCC 61.258 60.000 0.00 0.00 0.00 4.70
2453 6695 2.363018 CCCTCCTCTCACGCTCCA 60.363 66.667 0.00 0.00 0.00 3.86
2454 6696 2.716017 CCCTCCTCTCACGCTCCAC 61.716 68.421 0.00 0.00 0.00 4.02
2455 6697 2.716017 CCTCCTCTCACGCTCCACC 61.716 68.421 0.00 0.00 0.00 4.61
2456 6698 3.057547 CTCCTCTCACGCTCCACCG 62.058 68.421 0.00 0.00 0.00 4.94
2457 6699 4.803426 CCTCTCACGCTCCACCGC 62.803 72.222 0.00 0.00 0.00 5.68
2458 6700 4.803426 CTCTCACGCTCCACCGCC 62.803 72.222 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
160 164 0.696501 ACTACATCCACGGGCCTTTT 59.303 50.000 0.84 0.00 0.00 2.27
202 206 1.067821 GGAGTAGGCAGAATCCACGAG 59.932 57.143 0.00 0.00 0.00 4.18
228 232 0.532573 TGAGAAGAGGACATGCGACC 59.467 55.000 0.00 0.00 0.00 4.79
265 269 1.724545 TCCCTCGTTTTCTCCCAGAA 58.275 50.000 0.00 0.00 31.28 3.02
320 326 8.630054 AAGTTGTAATAAATCAGCCACACTTA 57.370 30.769 0.00 0.00 0.00 2.24
356 362 9.604626 GTATCGCTAATTCAGTACGTATAAAGT 57.395 33.333 0.00 0.00 0.00 2.66
357 363 9.823098 AGTATCGCTAATTCAGTACGTATAAAG 57.177 33.333 0.00 0.00 0.00 1.85
363 369 9.525409 AAAATAAGTATCGCTAATTCAGTACGT 57.475 29.630 0.00 0.00 0.00 3.57
393 399 6.808321 TGTATATTCTGCTACTTCCTTGGT 57.192 37.500 0.00 0.00 0.00 3.67
395 401 7.981789 TGACTTGTATATTCTGCTACTTCCTTG 59.018 37.037 0.00 0.00 0.00 3.61
413 420 5.798434 GCGTACGCATATGATATGACTTGTA 59.202 40.000 33.90 9.18 41.49 2.41
527 534 0.179215 GCACGTCTCAAAAGCCATCG 60.179 55.000 0.00 0.00 0.00 3.84
538 545 1.193650 TGCGTTATTTGTGCACGTCTC 59.806 47.619 13.13 0.00 36.29 3.36
542 549 1.962412 ACATGCGTTATTTGTGCACG 58.038 45.000 13.13 0.00 42.11 5.34
549 556 5.633182 CAGGTTTTGCTTACATGCGTTATTT 59.367 36.000 0.00 0.00 35.36 1.40
552 559 4.153958 CAGGTTTTGCTTACATGCGTTA 57.846 40.909 0.00 0.00 35.36 3.18
553 560 3.011949 CAGGTTTTGCTTACATGCGTT 57.988 42.857 0.00 0.00 35.36 4.84
554 561 2.704725 CAGGTTTTGCTTACATGCGT 57.295 45.000 0.00 0.00 35.36 5.24
744 880 3.865745 CGATAGACAAGAAATCAACCGCT 59.134 43.478 0.00 0.00 39.76 5.52
809 954 4.217118 CCAAACCTTCCAAGTCTCATTGAG 59.783 45.833 7.38 7.38 31.55 3.02
894 1039 1.003223 GCGTACGAGGTGTTGCTTTTT 60.003 47.619 21.65 0.00 0.00 1.94
920 4006 1.202348 CGGGTCTCTCTCTCGTACGTA 60.202 57.143 16.05 4.02 0.00 3.57
926 4012 2.919960 TACGGCGGGTCTCTCTCTCG 62.920 65.000 13.24 0.00 0.00 4.04
927 4013 0.535553 ATACGGCGGGTCTCTCTCTC 60.536 60.000 13.24 0.00 0.00 3.20
929 4015 1.843734 CGATACGGCGGGTCTCTCTC 61.844 65.000 13.24 0.00 0.00 3.20
986 4075 2.094597 TGTGCCATGTATGCAGCTTTTC 60.095 45.455 0.00 0.00 39.87 2.29
1179 4268 4.393778 TCCCTGTCGTCCCTCCCC 62.394 72.222 0.00 0.00 0.00 4.81
1180 4269 3.075641 GTCCCTGTCGTCCCTCCC 61.076 72.222 0.00 0.00 0.00 4.30
1437 4526 2.015736 ACCAGTCTATTCGCAAGCTG 57.984 50.000 0.00 0.00 37.18 4.24
1513 4637 7.436080 CCAACCATTTGCATATAACAAGATGTC 59.564 37.037 0.00 0.00 0.00 3.06
1526 4650 2.699846 AGTTCACACCAACCATTTGCAT 59.300 40.909 0.00 0.00 0.00 3.96
1527 4651 2.100584 GAGTTCACACCAACCATTTGCA 59.899 45.455 0.00 0.00 0.00 4.08
1574 5816 4.294232 CATTGCAACGGACAAACATGTTA 58.706 39.130 12.39 0.00 0.00 2.41
1580 5822 2.034053 TCTTCCATTGCAACGGACAAAC 59.966 45.455 15.01 0.00 0.00 2.93
1581 5823 2.302260 TCTTCCATTGCAACGGACAAA 58.698 42.857 15.01 0.00 0.00 2.83
1582 5824 1.974265 TCTTCCATTGCAACGGACAA 58.026 45.000 15.01 2.04 0.00 3.18
1583 5825 1.974265 TTCTTCCATTGCAACGGACA 58.026 45.000 15.01 0.44 0.00 4.02
1603 5845 0.749649 TCATGCTTGCCGTGGTTTTT 59.250 45.000 0.00 0.00 0.00 1.94
1608 5850 1.028330 ATGAGTCATGCTTGCCGTGG 61.028 55.000 4.39 0.00 0.00 4.94
1609 5851 0.376152 GATGAGTCATGCTTGCCGTG 59.624 55.000 11.20 0.00 0.00 4.94
1610 5852 0.745845 GGATGAGTCATGCTTGCCGT 60.746 55.000 16.70 0.00 0.00 5.68
1611 5853 1.442526 GGGATGAGTCATGCTTGCCG 61.443 60.000 22.11 0.00 32.77 5.69
1612 5854 1.105759 GGGGATGAGTCATGCTTGCC 61.106 60.000 22.11 12.54 32.77 4.52
1613 5855 0.106819 AGGGGATGAGTCATGCTTGC 60.107 55.000 22.11 7.57 32.77 4.01
1614 5856 2.092538 AGAAGGGGATGAGTCATGCTTG 60.093 50.000 22.11 0.00 32.77 4.01
1615 5857 2.172293 GAGAAGGGGATGAGTCATGCTT 59.828 50.000 22.11 11.09 32.77 3.91
1616 5858 1.767681 GAGAAGGGGATGAGTCATGCT 59.232 52.381 22.11 4.66 32.77 3.79
1618 5860 1.419387 GGGAGAAGGGGATGAGTCATG 59.581 57.143 11.20 0.00 0.00 3.07
1619 5861 1.296523 AGGGAGAAGGGGATGAGTCAT 59.703 52.381 4.98 4.98 0.00 3.06
1621 5863 1.419381 GAGGGAGAAGGGGATGAGTC 58.581 60.000 0.00 0.00 0.00 3.36
1622 5864 0.397816 CGAGGGAGAAGGGGATGAGT 60.398 60.000 0.00 0.00 0.00 3.41
1623 5865 0.105964 TCGAGGGAGAAGGGGATGAG 60.106 60.000 0.00 0.00 0.00 2.90
1624 5866 0.338467 TTCGAGGGAGAAGGGGATGA 59.662 55.000 0.00 0.00 0.00 2.92
1625 5867 1.204146 TTTCGAGGGAGAAGGGGATG 58.796 55.000 0.00 0.00 0.00 3.51
1626 5868 1.560146 GTTTTCGAGGGAGAAGGGGAT 59.440 52.381 0.00 0.00 0.00 3.85
1629 5871 2.290323 ACATGTTTTCGAGGGAGAAGGG 60.290 50.000 0.00 0.00 0.00 3.95
1630 5872 3.059352 ACATGTTTTCGAGGGAGAAGG 57.941 47.619 0.00 0.00 0.00 3.46
1631 5873 5.438761 AAAACATGTTTTCGAGGGAGAAG 57.561 39.130 27.01 0.00 38.27 2.85
1632 5874 6.292923 TCTAAAACATGTTTTCGAGGGAGAA 58.707 36.000 33.71 16.06 41.39 2.87
1633 5875 5.860611 TCTAAAACATGTTTTCGAGGGAGA 58.139 37.500 33.71 26.27 41.39 3.71
1635 5877 4.454504 GCTCTAAAACATGTTTTCGAGGGA 59.545 41.667 39.06 27.44 45.08 4.20
1636 5878 4.379499 GGCTCTAAAACATGTTTTCGAGGG 60.379 45.833 39.06 31.42 45.08 4.30
1638 5880 5.613358 AGGCTCTAAAACATGTTTTCGAG 57.387 39.130 37.15 37.15 46.41 4.04
1639 5881 6.403200 GCATAGGCTCTAAAACATGTTTTCGA 60.403 38.462 33.71 30.02 39.12 3.71
1640 5882 5.739161 GCATAGGCTCTAAAACATGTTTTCG 59.261 40.000 33.71 28.00 39.12 3.46
1641 5883 6.528072 GTGCATAGGCTCTAAAACATGTTTTC 59.472 38.462 33.71 21.47 40.89 2.29
1642 5884 6.389906 GTGCATAGGCTCTAAAACATGTTTT 58.610 36.000 32.63 32.63 42.11 2.43
1643 5885 5.105756 GGTGCATAGGCTCTAAAACATGTTT 60.106 40.000 18.13 18.13 41.91 2.83
1644 5886 4.399303 GGTGCATAGGCTCTAAAACATGTT 59.601 41.667 4.92 4.92 41.91 2.71
1645 5887 3.947834 GGTGCATAGGCTCTAAAACATGT 59.052 43.478 0.00 0.00 41.91 3.21
1646 5888 3.316308 GGGTGCATAGGCTCTAAAACATG 59.684 47.826 0.00 0.00 41.91 3.21
1647 5889 3.555966 GGGTGCATAGGCTCTAAAACAT 58.444 45.455 0.00 0.00 41.91 2.71
1648 5890 2.679639 CGGGTGCATAGGCTCTAAAACA 60.680 50.000 0.00 0.00 41.91 2.83
1649 5891 1.940613 CGGGTGCATAGGCTCTAAAAC 59.059 52.381 0.00 0.00 41.91 2.43
1650 5892 1.134220 CCGGGTGCATAGGCTCTAAAA 60.134 52.381 0.00 0.00 41.91 1.52
1651 5893 0.468226 CCGGGTGCATAGGCTCTAAA 59.532 55.000 0.00 0.00 41.91 1.85
1652 5894 1.407656 CCCGGGTGCATAGGCTCTAA 61.408 60.000 14.18 0.00 41.91 2.10
1653 5895 1.837051 CCCGGGTGCATAGGCTCTA 60.837 63.158 14.18 0.00 41.91 2.43
1654 5896 2.599139 TACCCGGGTGCATAGGCTCT 62.599 60.000 36.97 6.74 41.91 4.09
1655 5897 2.138179 TACCCGGGTGCATAGGCTC 61.138 63.158 36.97 0.00 41.91 4.70
1656 5898 2.041301 TACCCGGGTGCATAGGCT 60.041 61.111 36.97 8.21 41.91 4.58
1657 5899 1.979619 AAGTACCCGGGTGCATAGGC 61.980 60.000 38.49 18.29 41.68 3.93
1658 5900 0.106149 GAAGTACCCGGGTGCATAGG 59.894 60.000 38.49 6.51 33.14 2.57
1659 5901 1.120530 AGAAGTACCCGGGTGCATAG 58.879 55.000 38.49 7.31 33.14 2.23
1660 5902 1.575419 AAGAAGTACCCGGGTGCATA 58.425 50.000 38.49 17.40 33.14 3.14
1661 5903 1.575419 TAAGAAGTACCCGGGTGCAT 58.425 50.000 38.49 30.24 33.14 3.96
1662 5904 1.483415 GATAAGAAGTACCCGGGTGCA 59.517 52.381 38.49 21.38 33.14 4.57
1663 5905 1.202615 GGATAAGAAGTACCCGGGTGC 60.203 57.143 36.97 34.59 0.00 5.01
1664 5906 2.112998 TGGATAAGAAGTACCCGGGTG 58.887 52.381 36.97 6.22 0.00 4.61
1665 5907 2.502947 GTTGGATAAGAAGTACCCGGGT 59.497 50.000 32.66 32.66 0.00 5.28
1666 5908 2.158856 GGTTGGATAAGAAGTACCCGGG 60.159 54.545 22.25 22.25 0.00 5.73
1667 5909 2.502538 TGGTTGGATAAGAAGTACCCGG 59.497 50.000 0.00 0.00 0.00 5.73
1668 5910 3.197116 AGTGGTTGGATAAGAAGTACCCG 59.803 47.826 0.00 0.00 0.00 5.28
1669 5911 4.224370 TGAGTGGTTGGATAAGAAGTACCC 59.776 45.833 0.00 0.00 0.00 3.69
1670 5912 5.416271 TGAGTGGTTGGATAAGAAGTACC 57.584 43.478 0.00 0.00 0.00 3.34
1671 5913 6.539103 GGAATGAGTGGTTGGATAAGAAGTAC 59.461 42.308 0.00 0.00 0.00 2.73
1672 5914 6.443849 AGGAATGAGTGGTTGGATAAGAAGTA 59.556 38.462 0.00 0.00 0.00 2.24
1673 5915 5.251700 AGGAATGAGTGGTTGGATAAGAAGT 59.748 40.000 0.00 0.00 0.00 3.01
1674 5916 5.587844 CAGGAATGAGTGGTTGGATAAGAAG 59.412 44.000 0.00 0.00 0.00 2.85
1675 5917 5.500234 CAGGAATGAGTGGTTGGATAAGAA 58.500 41.667 0.00 0.00 0.00 2.52
1676 5918 4.626287 GCAGGAATGAGTGGTTGGATAAGA 60.626 45.833 0.00 0.00 0.00 2.10
1677 5919 3.629398 GCAGGAATGAGTGGTTGGATAAG 59.371 47.826 0.00 0.00 0.00 1.73
1678 5920 3.010027 TGCAGGAATGAGTGGTTGGATAA 59.990 43.478 0.00 0.00 0.00 1.75
1679 5921 2.575735 TGCAGGAATGAGTGGTTGGATA 59.424 45.455 0.00 0.00 0.00 2.59
1680 5922 1.355381 TGCAGGAATGAGTGGTTGGAT 59.645 47.619 0.00 0.00 0.00 3.41
1681 5923 0.770499 TGCAGGAATGAGTGGTTGGA 59.230 50.000 0.00 0.00 0.00 3.53
1682 5924 1.747355 GATGCAGGAATGAGTGGTTGG 59.253 52.381 0.00 0.00 0.00 3.77
1683 5925 2.163010 GTGATGCAGGAATGAGTGGTTG 59.837 50.000 0.00 0.00 0.00 3.77
1684 5926 2.440409 GTGATGCAGGAATGAGTGGTT 58.560 47.619 0.00 0.00 0.00 3.67
1685 5927 1.676916 CGTGATGCAGGAATGAGTGGT 60.677 52.381 0.00 0.00 0.00 4.16
1686 5928 1.012086 CGTGATGCAGGAATGAGTGG 58.988 55.000 0.00 0.00 0.00 4.00
1687 5929 2.014335 TCGTGATGCAGGAATGAGTG 57.986 50.000 0.00 0.00 0.00 3.51
1688 5930 2.996249 ATCGTGATGCAGGAATGAGT 57.004 45.000 0.00 0.00 32.06 3.41
1689 5931 2.220363 CGAATCGTGATGCAGGAATGAG 59.780 50.000 0.00 0.00 32.06 2.90
1690 5932 2.204237 CGAATCGTGATGCAGGAATGA 58.796 47.619 0.00 0.00 32.06 2.57
1691 5933 1.935873 ACGAATCGTGATGCAGGAATG 59.064 47.619 7.77 0.00 39.18 2.67
1692 5934 2.315925 ACGAATCGTGATGCAGGAAT 57.684 45.000 7.77 0.00 39.18 3.01
1693 5935 3.832704 ACGAATCGTGATGCAGGAA 57.167 47.368 7.77 0.00 39.18 3.36
1703 5945 6.842163 AGAGAAAATTATTTGCACGAATCGT 58.158 32.000 0.96 0.96 42.36 3.73
1704 5946 7.725610 AAGAGAAAATTATTTGCACGAATCG 57.274 32.000 0.00 0.00 0.00 3.34
1746 5988 9.950680 CAAAGTTGAAGTACAAATACATGTTCT 57.049 29.630 2.30 0.00 40.36 3.01
1747 5989 8.690840 GCAAAGTTGAAGTACAAATACATGTTC 58.309 33.333 2.30 0.00 40.36 3.18
1748 5990 8.194104 TGCAAAGTTGAAGTACAAATACATGTT 58.806 29.630 2.30 0.00 40.36 2.71
1749 5991 7.711846 TGCAAAGTTGAAGTACAAATACATGT 58.288 30.769 2.69 2.69 40.36 3.21
1750 5992 7.148918 GCTGCAAAGTTGAAGTACAAATACATG 60.149 37.037 1.02 0.00 40.36 3.21
1751 5993 6.863126 GCTGCAAAGTTGAAGTACAAATACAT 59.137 34.615 1.02 0.00 40.36 2.29
1752 5994 6.183360 TGCTGCAAAGTTGAAGTACAAATACA 60.183 34.615 0.00 0.00 40.36 2.29
1753 5995 6.142320 GTGCTGCAAAGTTGAAGTACAAATAC 59.858 38.462 13.61 0.00 45.51 1.89
1754 5996 6.205784 GTGCTGCAAAGTTGAAGTACAAATA 58.794 36.000 13.61 0.00 45.51 1.40
1755 5997 5.043248 GTGCTGCAAAGTTGAAGTACAAAT 58.957 37.500 13.61 0.00 45.51 2.32
1756 5998 4.420168 GTGCTGCAAAGTTGAAGTACAAA 58.580 39.130 13.61 0.00 45.51 2.83
1757 5999 4.027572 GTGCTGCAAAGTTGAAGTACAA 57.972 40.909 13.61 0.00 45.51 2.41
1758 6000 3.691049 GTGCTGCAAAGTTGAAGTACA 57.309 42.857 13.61 0.00 45.51 2.90
1759 6001 3.691049 TGTGCTGCAAAGTTGAAGTAC 57.309 42.857 12.06 12.06 46.14 2.73
1760 6002 3.441922 TGTTGTGCTGCAAAGTTGAAGTA 59.558 39.130 2.77 0.00 39.03 2.24
1761 6003 2.230992 TGTTGTGCTGCAAAGTTGAAGT 59.769 40.909 2.77 0.00 39.03 3.01
1762 6004 2.878580 TGTTGTGCTGCAAAGTTGAAG 58.121 42.857 2.77 0.00 39.03 3.02
1763 6005 3.309961 TTGTTGTGCTGCAAAGTTGAA 57.690 38.095 2.77 0.00 39.03 2.69
1764 6006 3.252400 CTTTGTTGTGCTGCAAAGTTGA 58.748 40.909 2.77 0.00 43.69 3.18
1765 6007 3.644805 CTTTGTTGTGCTGCAAAGTTG 57.355 42.857 2.77 0.00 43.69 3.16
1769 6011 2.383368 AAGCTTTGTTGTGCTGCAAA 57.617 40.000 2.77 0.00 39.71 3.68
1770 6012 2.094078 AGAAAGCTTTGTTGTGCTGCAA 60.094 40.909 18.30 0.00 39.71 4.08
1771 6013 1.477700 AGAAAGCTTTGTTGTGCTGCA 59.522 42.857 18.30 0.00 39.71 4.41
1772 6014 2.214387 AGAAAGCTTTGTTGTGCTGC 57.786 45.000 18.30 0.00 39.71 5.25
1773 6015 4.863491 ACATAGAAAGCTTTGTTGTGCTG 58.137 39.130 18.30 8.38 39.71 4.41
1774 6016 5.997746 TCTACATAGAAAGCTTTGTTGTGCT 59.002 36.000 18.30 8.71 41.82 4.40
1775 6017 6.241207 TCTACATAGAAAGCTTTGTTGTGC 57.759 37.500 18.30 0.25 37.47 4.57
1776 6018 8.292448 ACATTCTACATAGAAAGCTTTGTTGTG 58.708 33.333 18.30 16.43 44.63 3.33
1777 6019 8.292448 CACATTCTACATAGAAAGCTTTGTTGT 58.708 33.333 18.30 19.36 44.63 3.32
1778 6020 7.752239 CCACATTCTACATAGAAAGCTTTGTTG 59.248 37.037 18.30 15.03 44.63 3.33
1779 6021 7.094205 CCCACATTCTACATAGAAAGCTTTGTT 60.094 37.037 18.30 7.23 44.63 2.83
1780 6022 6.375455 CCCACATTCTACATAGAAAGCTTTGT 59.625 38.462 18.30 15.90 44.63 2.83
1781 6023 6.599244 TCCCACATTCTACATAGAAAGCTTTG 59.401 38.462 18.30 5.25 44.63 2.77
1782 6024 6.721318 TCCCACATTCTACATAGAAAGCTTT 58.279 36.000 12.53 12.53 44.63 3.51
1783 6025 6.313519 TCCCACATTCTACATAGAAAGCTT 57.686 37.500 5.48 0.00 44.63 3.74
1784 6026 5.957771 TCCCACATTCTACATAGAAAGCT 57.042 39.130 5.48 0.00 44.63 3.74
1785 6027 8.677148 TTTATCCCACATTCTACATAGAAAGC 57.323 34.615 5.48 0.00 44.63 3.51
1792 6034 9.396022 CTGTAAGTTTTATCCCACATTCTACAT 57.604 33.333 0.00 0.00 0.00 2.29
1793 6035 8.598916 TCTGTAAGTTTTATCCCACATTCTACA 58.401 33.333 0.00 0.00 33.76 2.74
1794 6036 9.614792 ATCTGTAAGTTTTATCCCACATTCTAC 57.385 33.333 0.00 0.00 33.76 2.59
1796 6038 9.533831 AAATCTGTAAGTTTTATCCCACATTCT 57.466 29.630 0.00 0.00 34.30 2.40
1901 6143 9.566432 AGAATGTGAGATAAACTTTCAGACTTT 57.434 29.630 0.00 0.00 35.33 2.66
1903 6145 9.868277 CTAGAATGTGAGATAAACTTTCAGACT 57.132 33.333 0.00 0.00 35.33 3.24
1904 6146 9.646427 ACTAGAATGTGAGATAAACTTTCAGAC 57.354 33.333 0.00 0.00 35.33 3.51
1925 6167 9.199982 GCAGTACAACATAACTTTGTAACTAGA 57.800 33.333 0.00 0.00 40.30 2.43
1926 6168 8.984764 TGCAGTACAACATAACTTTGTAACTAG 58.015 33.333 0.00 0.00 40.30 2.57
1927 6169 8.890124 TGCAGTACAACATAACTTTGTAACTA 57.110 30.769 0.00 0.00 40.30 2.24
1928 6170 7.795482 TGCAGTACAACATAACTTTGTAACT 57.205 32.000 0.00 0.00 40.30 2.24
1929 6171 8.844441 TTTGCAGTACAACATAACTTTGTAAC 57.156 30.769 0.00 0.00 40.30 2.50
1930 6172 8.679100 ACTTTGCAGTACAACATAACTTTGTAA 58.321 29.630 0.00 0.00 40.30 2.41
1931 6173 8.215926 ACTTTGCAGTACAACATAACTTTGTA 57.784 30.769 0.00 0.00 38.23 2.41
1932 6174 7.095695 ACTTTGCAGTACAACATAACTTTGT 57.904 32.000 0.00 0.00 38.23 2.83
1933 6175 7.985634 AACTTTGCAGTACAACATAACTTTG 57.014 32.000 0.00 0.00 38.23 2.77
1934 6176 8.247562 TCAAACTTTGCAGTACAACATAACTTT 58.752 29.630 0.00 0.00 38.23 2.66
1935 6177 7.767261 TCAAACTTTGCAGTACAACATAACTT 58.233 30.769 0.00 0.00 38.23 2.66
1936 6178 7.328277 TCAAACTTTGCAGTACAACATAACT 57.672 32.000 0.00 0.00 38.23 2.24
1937 6179 7.700656 ACTTCAAACTTTGCAGTACAACATAAC 59.299 33.333 5.14 0.00 35.39 1.89
1938 6180 7.767261 ACTTCAAACTTTGCAGTACAACATAA 58.233 30.769 5.14 0.00 35.39 1.90
1939 6181 7.328277 ACTTCAAACTTTGCAGTACAACATA 57.672 32.000 5.14 0.00 35.39 2.29
1940 6182 6.207691 ACTTCAAACTTTGCAGTACAACAT 57.792 33.333 5.14 0.00 35.39 2.71
1941 6183 5.637006 ACTTCAAACTTTGCAGTACAACA 57.363 34.783 5.14 0.00 35.39 3.33
1942 6184 6.944557 AAACTTCAAACTTTGCAGTACAAC 57.055 33.333 7.16 0.00 36.12 3.32
1943 6185 8.516234 TCTTAAACTTCAAACTTTGCAGTACAA 58.484 29.630 7.16 4.53 36.12 2.41
1944 6186 7.966204 GTCTTAAACTTCAAACTTTGCAGTACA 59.034 33.333 7.16 0.00 36.12 2.90
1945 6187 7.966204 TGTCTTAAACTTCAAACTTTGCAGTAC 59.034 33.333 7.16 3.18 36.12 2.73
1946 6188 8.046294 TGTCTTAAACTTCAAACTTTGCAGTA 57.954 30.769 7.16 0.00 36.12 2.74
1947 6189 6.919721 TGTCTTAAACTTCAAACTTTGCAGT 58.080 32.000 1.39 1.39 38.79 4.40
1948 6190 7.489113 ACATGTCTTAAACTTCAAACTTTGCAG 59.511 33.333 0.00 0.17 0.00 4.41
1949 6191 7.319646 ACATGTCTTAAACTTCAAACTTTGCA 58.680 30.769 0.00 0.00 0.00 4.08
1950 6192 7.755582 ACATGTCTTAAACTTCAAACTTTGC 57.244 32.000 0.00 0.00 0.00 3.68
2001 6243 9.528489 ACACAACTACCTTATTACATGGAATTT 57.472 29.630 8.85 0.00 0.00 1.82
2003 6245 9.832445 CTACACAACTACCTTATTACATGGAAT 57.168 33.333 8.55 8.55 0.00 3.01
2004 6246 7.767198 GCTACACAACTACCTTATTACATGGAA 59.233 37.037 0.00 0.00 0.00 3.53
2005 6247 7.093245 TGCTACACAACTACCTTATTACATGGA 60.093 37.037 0.00 0.00 0.00 3.41
2006 6248 7.011109 GTGCTACACAACTACCTTATTACATGG 59.989 40.741 0.00 0.00 34.08 3.66
2007 6249 7.547722 TGTGCTACACAACTACCTTATTACATG 59.452 37.037 0.00 0.00 41.69 3.21
2008 6250 7.617225 TGTGCTACACAACTACCTTATTACAT 58.383 34.615 0.00 0.00 41.69 2.29
2009 6251 6.995364 TGTGCTACACAACTACCTTATTACA 58.005 36.000 0.00 0.00 41.69 2.41
2010 6252 7.318141 TCTGTGCTACACAACTACCTTATTAC 58.682 38.462 1.64 0.00 44.08 1.89
2011 6253 7.470935 TCTGTGCTACACAACTACCTTATTA 57.529 36.000 1.64 0.00 44.08 0.98
2012 6254 6.354794 TCTGTGCTACACAACTACCTTATT 57.645 37.500 1.64 0.00 44.08 1.40
2013 6255 5.995565 TCTGTGCTACACAACTACCTTAT 57.004 39.130 1.64 0.00 44.08 1.73
2014 6256 5.715279 AGATCTGTGCTACACAACTACCTTA 59.285 40.000 0.00 0.00 44.08 2.69
2015 6257 4.528596 AGATCTGTGCTACACAACTACCTT 59.471 41.667 0.00 0.00 44.08 3.50
2016 6258 4.090090 AGATCTGTGCTACACAACTACCT 58.910 43.478 0.00 0.00 44.08 3.08
2017 6259 4.457834 AGATCTGTGCTACACAACTACC 57.542 45.455 0.00 0.00 44.08 3.18
2018 6260 7.412020 GCTTTAAGATCTGTGCTACACAACTAC 60.412 40.741 0.00 0.00 44.08 2.73
2019 6261 6.590292 GCTTTAAGATCTGTGCTACACAACTA 59.410 38.462 0.00 0.00 44.08 2.24
2020 6262 5.409826 GCTTTAAGATCTGTGCTACACAACT 59.590 40.000 0.00 0.00 44.08 3.16
2021 6263 5.179368 TGCTTTAAGATCTGTGCTACACAAC 59.821 40.000 0.00 0.00 44.08 3.32
2022 6264 5.304778 TGCTTTAAGATCTGTGCTACACAA 58.695 37.500 0.00 0.00 44.08 3.33
2023 6265 4.893608 TGCTTTAAGATCTGTGCTACACA 58.106 39.130 0.00 0.00 42.45 3.72
2024 6266 5.622378 GTTGCTTTAAGATCTGTGCTACAC 58.378 41.667 0.00 0.00 34.56 2.90
2025 6267 4.388773 CGTTGCTTTAAGATCTGTGCTACA 59.611 41.667 16.89 3.84 0.00 2.74
2026 6268 4.389077 ACGTTGCTTTAAGATCTGTGCTAC 59.611 41.667 0.00 5.20 0.00 3.58
2027 6269 4.566004 ACGTTGCTTTAAGATCTGTGCTA 58.434 39.130 0.00 0.00 0.00 3.49
2028 6270 3.403038 ACGTTGCTTTAAGATCTGTGCT 58.597 40.909 0.00 0.00 0.00 4.40
2029 6271 3.813529 ACGTTGCTTTAAGATCTGTGC 57.186 42.857 0.00 0.00 0.00 4.57
2030 6272 4.213270 TCCAACGTTGCTTTAAGATCTGTG 59.787 41.667 22.93 4.05 0.00 3.66
2031 6273 4.385825 TCCAACGTTGCTTTAAGATCTGT 58.614 39.130 22.93 0.00 0.00 3.41
2032 6274 4.452455 ACTCCAACGTTGCTTTAAGATCTG 59.548 41.667 22.93 4.69 0.00 2.90
2033 6275 4.452455 CACTCCAACGTTGCTTTAAGATCT 59.548 41.667 22.93 0.00 0.00 2.75
2034 6276 4.712763 CACTCCAACGTTGCTTTAAGATC 58.287 43.478 22.93 0.00 0.00 2.75
2035 6277 3.058224 GCACTCCAACGTTGCTTTAAGAT 60.058 43.478 22.93 1.87 0.00 2.40
2036 6278 2.289547 GCACTCCAACGTTGCTTTAAGA 59.710 45.455 22.93 12.04 0.00 2.10
2037 6279 2.290641 AGCACTCCAACGTTGCTTTAAG 59.709 45.455 22.93 14.93 31.02 1.85
2038 6280 2.294074 AGCACTCCAACGTTGCTTTAA 58.706 42.857 22.93 4.34 31.02 1.52
2039 6281 1.961793 AGCACTCCAACGTTGCTTTA 58.038 45.000 22.93 6.72 31.02 1.85
2040 6282 1.961793 TAGCACTCCAACGTTGCTTT 58.038 45.000 22.93 5.38 37.08 3.51
2041 6283 1.873591 CTTAGCACTCCAACGTTGCTT 59.126 47.619 22.93 5.75 37.08 3.91
2042 6284 1.070134 TCTTAGCACTCCAACGTTGCT 59.930 47.619 22.93 18.83 39.36 3.91
2043 6285 1.508632 TCTTAGCACTCCAACGTTGC 58.491 50.000 22.93 12.04 0.00 4.17
2044 6286 4.327357 CACTATCTTAGCACTCCAACGTTG 59.673 45.833 21.47 21.47 0.00 4.10
2045 6287 4.219944 TCACTATCTTAGCACTCCAACGTT 59.780 41.667 0.00 0.00 0.00 3.99
2046 6288 3.762288 TCACTATCTTAGCACTCCAACGT 59.238 43.478 0.00 0.00 0.00 3.99
2047 6289 4.355437 CTCACTATCTTAGCACTCCAACG 58.645 47.826 0.00 0.00 0.00 4.10
2048 6290 4.688021 CCTCACTATCTTAGCACTCCAAC 58.312 47.826 0.00 0.00 0.00 3.77
2049 6291 3.133003 GCCTCACTATCTTAGCACTCCAA 59.867 47.826 0.00 0.00 0.00 3.53
2050 6292 2.695666 GCCTCACTATCTTAGCACTCCA 59.304 50.000 0.00 0.00 0.00 3.86
2051 6293 2.036604 GGCCTCACTATCTTAGCACTCC 59.963 54.545 0.00 0.00 0.00 3.85
2052 6294 2.036604 GGGCCTCACTATCTTAGCACTC 59.963 54.545 0.84 0.00 0.00 3.51
2053 6295 2.043227 GGGCCTCACTATCTTAGCACT 58.957 52.381 0.84 0.00 0.00 4.40
2054 6296 1.269831 CGGGCCTCACTATCTTAGCAC 60.270 57.143 0.84 0.00 0.00 4.40
2055 6297 1.040646 CGGGCCTCACTATCTTAGCA 58.959 55.000 0.84 0.00 0.00 3.49
2056 6298 0.318762 CCGGGCCTCACTATCTTAGC 59.681 60.000 0.84 0.00 0.00 3.09
2057 6299 0.969894 CCCGGGCCTCACTATCTTAG 59.030 60.000 8.08 0.00 0.00 2.18
2058 6300 0.263765 ACCCGGGCCTCACTATCTTA 59.736 55.000 24.08 0.00 0.00 2.10
2059 6301 1.003051 ACCCGGGCCTCACTATCTT 59.997 57.895 24.08 0.00 0.00 2.40
2060 6302 1.762460 CACCCGGGCCTCACTATCT 60.762 63.158 24.08 0.00 0.00 1.98
2061 6303 2.822399 CACCCGGGCCTCACTATC 59.178 66.667 24.08 0.00 0.00 2.08
2062 6304 3.480133 GCACCCGGGCCTCACTAT 61.480 66.667 24.08 0.00 0.00 2.12
2063 6305 2.882403 TATGCACCCGGGCCTCACTA 62.882 60.000 24.08 1.79 0.00 2.74
2065 6307 3.338275 TTATGCACCCGGGCCTCAC 62.338 63.158 24.08 6.09 0.00 3.51
2066 6308 3.012119 TTATGCACCCGGGCCTCA 61.012 61.111 24.08 16.72 0.00 3.86
2067 6309 2.203209 CTTATGCACCCGGGCCTC 60.203 66.667 24.08 10.65 0.00 4.70
2068 6310 4.506255 GCTTATGCACCCGGGCCT 62.506 66.667 24.08 5.01 39.41 5.19
2069 6311 4.506255 AGCTTATGCACCCGGGCC 62.506 66.667 24.08 13.26 42.74 5.80
2070 6312 2.902343 GAGCTTATGCACCCGGGC 60.902 66.667 24.08 8.36 42.74 6.13
2071 6313 1.819632 GTGAGCTTATGCACCCGGG 60.820 63.158 22.25 22.25 42.74 5.73
2072 6314 0.676466 TTGTGAGCTTATGCACCCGG 60.676 55.000 0.00 0.00 42.74 5.73
2073 6315 1.164411 TTTGTGAGCTTATGCACCCG 58.836 50.000 3.16 0.00 42.74 5.28
2074 6316 3.445096 AGATTTTGTGAGCTTATGCACCC 59.555 43.478 3.16 0.00 42.74 4.61
2075 6317 4.418392 CAGATTTTGTGAGCTTATGCACC 58.582 43.478 3.16 0.00 42.74 5.01
2076 6318 3.855950 GCAGATTTTGTGAGCTTATGCAC 59.144 43.478 3.16 0.00 42.74 4.57
2077 6319 3.506844 TGCAGATTTTGTGAGCTTATGCA 59.493 39.130 3.16 0.00 42.74 3.96
2078 6320 4.100707 TGCAGATTTTGTGAGCTTATGC 57.899 40.909 0.00 0.00 40.05 3.14
2079 6321 5.747197 GGAATGCAGATTTTGTGAGCTTATG 59.253 40.000 0.00 0.00 0.00 1.90
2080 6322 5.163478 GGGAATGCAGATTTTGTGAGCTTAT 60.163 40.000 0.00 0.00 0.00 1.73
2081 6323 4.158394 GGGAATGCAGATTTTGTGAGCTTA 59.842 41.667 0.00 0.00 0.00 3.09
2082 6324 3.056322 GGGAATGCAGATTTTGTGAGCTT 60.056 43.478 0.00 0.00 0.00 3.74
2083 6325 2.494870 GGGAATGCAGATTTTGTGAGCT 59.505 45.455 0.00 0.00 0.00 4.09
2084 6326 2.417787 GGGGAATGCAGATTTTGTGAGC 60.418 50.000 0.00 0.00 0.00 4.26
2085 6327 3.094572 AGGGGAATGCAGATTTTGTGAG 58.905 45.455 0.00 0.00 0.00 3.51
2086 6328 3.091545 GAGGGGAATGCAGATTTTGTGA 58.908 45.455 0.00 0.00 0.00 3.58
2087 6329 2.167075 GGAGGGGAATGCAGATTTTGTG 59.833 50.000 0.00 0.00 0.00 3.33
2088 6330 2.460669 GGAGGGGAATGCAGATTTTGT 58.539 47.619 0.00 0.00 0.00 2.83
2089 6331 1.758862 GGGAGGGGAATGCAGATTTTG 59.241 52.381 0.00 0.00 0.00 2.44
2090 6332 1.343377 GGGGAGGGGAATGCAGATTTT 60.343 52.381 0.00 0.00 0.00 1.82
2091 6333 0.262876 GGGGAGGGGAATGCAGATTT 59.737 55.000 0.00 0.00 0.00 2.17
2092 6334 1.659035 GGGGGAGGGGAATGCAGATT 61.659 60.000 0.00 0.00 0.00 2.40
2093 6335 2.087461 GGGGGAGGGGAATGCAGAT 61.087 63.158 0.00 0.00 0.00 2.90
2094 6336 2.696125 GGGGGAGGGGAATGCAGA 60.696 66.667 0.00 0.00 0.00 4.26
2095 6337 2.290021 GAAGGGGGAGGGGAATGCAG 62.290 65.000 0.00 0.00 0.00 4.41
2096 6338 2.204448 AAGGGGGAGGGGAATGCA 60.204 61.111 0.00 0.00 0.00 3.96
2097 6339 2.603580 GAAGGGGGAGGGGAATGC 59.396 66.667 0.00 0.00 0.00 3.56
2098 6340 1.309102 AGGAAGGGGGAGGGGAATG 60.309 63.158 0.00 0.00 0.00 2.67
2099 6341 1.006227 GAGGAAGGGGGAGGGGAAT 59.994 63.158 0.00 0.00 0.00 3.01
2100 6342 2.459710 GAGGAAGGGGGAGGGGAA 59.540 66.667 0.00 0.00 0.00 3.97
2101 6343 3.707189 GGAGGAAGGGGGAGGGGA 61.707 72.222 0.00 0.00 0.00 4.81
2102 6344 4.038804 TGGAGGAAGGGGGAGGGG 62.039 72.222 0.00 0.00 0.00 4.79
2103 6345 2.692741 GTGGAGGAAGGGGGAGGG 60.693 72.222 0.00 0.00 0.00 4.30
2104 6346 1.308216 ATGTGGAGGAAGGGGGAGG 60.308 63.158 0.00 0.00 0.00 4.30
2105 6347 1.918253 CATGTGGAGGAAGGGGGAG 59.082 63.158 0.00 0.00 0.00 4.30
2106 6348 2.308722 GCATGTGGAGGAAGGGGGA 61.309 63.158 0.00 0.00 0.00 4.81
2107 6349 2.276740 GCATGTGGAGGAAGGGGG 59.723 66.667 0.00 0.00 0.00 5.40
2108 6350 2.276740 GGCATGTGGAGGAAGGGG 59.723 66.667 0.00 0.00 0.00 4.79
2109 6351 1.379044 GTGGCATGTGGAGGAAGGG 60.379 63.158 0.00 0.00 0.00 3.95
2110 6352 0.038744 AAGTGGCATGTGGAGGAAGG 59.961 55.000 0.00 0.00 0.00 3.46
2111 6353 1.915141 AAAGTGGCATGTGGAGGAAG 58.085 50.000 0.00 0.00 0.00 3.46
2112 6354 2.375174 AGTAAAGTGGCATGTGGAGGAA 59.625 45.455 0.00 0.00 0.00 3.36
2113 6355 1.985159 AGTAAAGTGGCATGTGGAGGA 59.015 47.619 0.00 0.00 0.00 3.71
2114 6356 2.359900 GAGTAAAGTGGCATGTGGAGG 58.640 52.381 0.00 0.00 0.00 4.30
2115 6357 2.359900 GGAGTAAAGTGGCATGTGGAG 58.640 52.381 0.00 0.00 0.00 3.86
2116 6358 1.338674 CGGAGTAAAGTGGCATGTGGA 60.339 52.381 0.00 0.00 0.00 4.02
2117 6359 1.086696 CGGAGTAAAGTGGCATGTGG 58.913 55.000 0.00 0.00 0.00 4.17
2133 6375 2.766263 AGAGGATAAGCAATGACACGGA 59.234 45.455 0.00 0.00 0.00 4.69
2134 6376 3.185246 AGAGGATAAGCAATGACACGG 57.815 47.619 0.00 0.00 0.00 4.94
2135 6377 5.447818 GGAAAAGAGGATAAGCAATGACACG 60.448 44.000 0.00 0.00 0.00 4.49
2136 6378 5.415701 TGGAAAAGAGGATAAGCAATGACAC 59.584 40.000 0.00 0.00 0.00 3.67
2141 6383 6.023334 AGGATGGAAAAGAGGATAAGCAAT 57.977 37.500 0.00 0.00 0.00 3.56
2172 6414 0.105224 TGAACATCGTGGTCACCGTT 59.895 50.000 2.21 0.00 39.52 4.44
2180 6422 8.797215 CATTGTTTAACAATATGAACATCGTGG 58.203 33.333 20.94 2.95 46.22 4.94
2209 6451 9.630098 CCGTACGGTTTATACAATATTGTAGAT 57.370 33.333 27.40 18.13 45.80 1.98
2228 6470 7.479070 GTACGATTTATACAATACCGTACGG 57.521 40.000 32.22 32.22 40.48 4.02
2230 6472 9.450807 AACTGTACGATTTATACAATACCGTAC 57.549 33.333 0.00 0.00 46.08 3.67
2269 6511 9.912634 CCATACTATTCAACAAACTCAAACATT 57.087 29.630 0.00 0.00 0.00 2.71
2270 6512 9.077885 ACCATACTATTCAACAAACTCAAACAT 57.922 29.630 0.00 0.00 0.00 2.71
2271 6513 8.458573 ACCATACTATTCAACAAACTCAAACA 57.541 30.769 0.00 0.00 0.00 2.83
2272 6514 9.744468 AAACCATACTATTCAACAAACTCAAAC 57.256 29.630 0.00 0.00 0.00 2.93
2297 6539 9.619316 CGGTTGTAAATGATGAGACAAAAATAA 57.381 29.630 0.00 0.00 33.82 1.40
2298 6540 8.788806 ACGGTTGTAAATGATGAGACAAAAATA 58.211 29.630 0.00 0.00 33.82 1.40
2299 6541 7.657336 ACGGTTGTAAATGATGAGACAAAAAT 58.343 30.769 0.00 0.00 33.82 1.82
2300 6542 7.033530 ACGGTTGTAAATGATGAGACAAAAA 57.966 32.000 0.00 0.00 33.82 1.94
2301 6543 6.627395 ACGGTTGTAAATGATGAGACAAAA 57.373 33.333 0.00 0.00 33.82 2.44
2302 6544 6.627395 AACGGTTGTAAATGATGAGACAAA 57.373 33.333 0.00 0.00 33.82 2.83
2303 6545 6.627395 AAACGGTTGTAAATGATGAGACAA 57.373 33.333 0.00 0.00 0.00 3.18
2304 6546 6.627395 AAAACGGTTGTAAATGATGAGACA 57.373 33.333 0.00 0.00 0.00 3.41
2305 6547 9.620660 AAATAAAACGGTTGTAAATGATGAGAC 57.379 29.630 0.00 0.00 0.00 3.36
2308 6550 9.562583 GCTAAATAAAACGGTTGTAAATGATGA 57.437 29.630 0.00 0.00 0.00 2.92
2309 6551 9.567848 AGCTAAATAAAACGGTTGTAAATGATG 57.432 29.630 0.00 0.00 0.00 3.07
2310 6552 9.567848 CAGCTAAATAAAACGGTTGTAAATGAT 57.432 29.630 0.00 0.00 0.00 2.45
2311 6553 8.024285 CCAGCTAAATAAAACGGTTGTAAATGA 58.976 33.333 0.00 0.00 0.00 2.57
2312 6554 7.810759 ACCAGCTAAATAAAACGGTTGTAAATG 59.189 33.333 0.00 0.00 0.00 2.32
2313 6555 7.888424 ACCAGCTAAATAAAACGGTTGTAAAT 58.112 30.769 0.00 0.00 0.00 1.40
2314 6556 7.274603 ACCAGCTAAATAAAACGGTTGTAAA 57.725 32.000 0.00 0.00 0.00 2.01
2315 6557 6.880942 ACCAGCTAAATAAAACGGTTGTAA 57.119 33.333 0.00 0.00 0.00 2.41
2316 6558 6.880942 AACCAGCTAAATAAAACGGTTGTA 57.119 33.333 0.00 0.00 34.10 2.41
2317 6559 5.777850 AACCAGCTAAATAAAACGGTTGT 57.222 34.783 0.00 0.00 34.10 3.32
2318 6560 8.751302 ATAAAACCAGCTAAATAAAACGGTTG 57.249 30.769 0.00 0.00 35.52 3.77
2319 6561 9.767228 AAATAAAACCAGCTAAATAAAACGGTT 57.233 25.926 0.00 0.00 36.85 4.44
2320 6562 9.414295 GAAATAAAACCAGCTAAATAAAACGGT 57.586 29.630 0.00 0.00 0.00 4.83
2321 6563 8.580431 CGAAATAAAACCAGCTAAATAAAACGG 58.420 33.333 0.00 0.00 0.00 4.44
2322 6564 9.120422 ACGAAATAAAACCAGCTAAATAAAACG 57.880 29.630 0.00 0.00 0.00 3.60
2326 6568 9.221933 TGAGACGAAATAAAACCAGCTAAATAA 57.778 29.630 0.00 0.00 0.00 1.40
2327 6569 8.780846 TGAGACGAAATAAAACCAGCTAAATA 57.219 30.769 0.00 0.00 0.00 1.40
2328 6570 7.681939 TGAGACGAAATAAAACCAGCTAAAT 57.318 32.000 0.00 0.00 0.00 1.40
2329 6571 7.148306 GGATGAGACGAAATAAAACCAGCTAAA 60.148 37.037 0.00 0.00 0.00 1.85
2330 6572 6.315393 GGATGAGACGAAATAAAACCAGCTAA 59.685 38.462 0.00 0.00 0.00 3.09
2331 6573 5.815740 GGATGAGACGAAATAAAACCAGCTA 59.184 40.000 0.00 0.00 0.00 3.32
2332 6574 4.636206 GGATGAGACGAAATAAAACCAGCT 59.364 41.667 0.00 0.00 0.00 4.24
2333 6575 4.636206 AGGATGAGACGAAATAAAACCAGC 59.364 41.667 0.00 0.00 0.00 4.85
2334 6576 5.294552 GGAGGATGAGACGAAATAAAACCAG 59.705 44.000 0.00 0.00 0.00 4.00
2335 6577 5.183228 GGAGGATGAGACGAAATAAAACCA 58.817 41.667 0.00 0.00 0.00 3.67
2336 6578 5.064834 GTGGAGGATGAGACGAAATAAAACC 59.935 44.000 0.00 0.00 0.00 3.27
2337 6579 5.064834 GGTGGAGGATGAGACGAAATAAAAC 59.935 44.000 0.00 0.00 0.00 2.43
2338 6580 5.183228 GGTGGAGGATGAGACGAAATAAAA 58.817 41.667 0.00 0.00 0.00 1.52
2339 6581 4.224147 TGGTGGAGGATGAGACGAAATAAA 59.776 41.667 0.00 0.00 0.00 1.40
2340 6582 3.772572 TGGTGGAGGATGAGACGAAATAA 59.227 43.478 0.00 0.00 0.00 1.40
2341 6583 3.132289 GTGGTGGAGGATGAGACGAAATA 59.868 47.826 0.00 0.00 0.00 1.40
2342 6584 2.093447 GTGGTGGAGGATGAGACGAAAT 60.093 50.000 0.00 0.00 0.00 2.17
2343 6585 1.275291 GTGGTGGAGGATGAGACGAAA 59.725 52.381 0.00 0.00 0.00 3.46
2344 6586 0.895530 GTGGTGGAGGATGAGACGAA 59.104 55.000 0.00 0.00 0.00 3.85
2345 6587 0.970937 GGTGGTGGAGGATGAGACGA 60.971 60.000 0.00 0.00 0.00 4.20
2346 6588 1.517832 GGTGGTGGAGGATGAGACG 59.482 63.158 0.00 0.00 0.00 4.18
2347 6589 1.627297 GGGGTGGTGGAGGATGAGAC 61.627 65.000 0.00 0.00 0.00 3.36
2348 6590 1.306997 GGGGTGGTGGAGGATGAGA 60.307 63.158 0.00 0.00 0.00 3.27
2349 6591 2.378634 GGGGGTGGTGGAGGATGAG 61.379 68.421 0.00 0.00 0.00 2.90
2350 6592 1.532894 TAGGGGGTGGTGGAGGATGA 61.533 60.000 0.00 0.00 0.00 2.92
2351 6593 1.004230 TAGGGGGTGGTGGAGGATG 59.996 63.158 0.00 0.00 0.00 3.51
2352 6594 1.004361 GTAGGGGGTGGTGGAGGAT 59.996 63.158 0.00 0.00 0.00 3.24
2353 6595 1.757508 AAGTAGGGGGTGGTGGAGGA 61.758 60.000 0.00 0.00 0.00 3.71
2354 6596 0.043637 TAAGTAGGGGGTGGTGGAGG 59.956 60.000 0.00 0.00 0.00 4.30
2355 6597 1.961133 TTAAGTAGGGGGTGGTGGAG 58.039 55.000 0.00 0.00 0.00 3.86
2356 6598 2.436964 TTTAAGTAGGGGGTGGTGGA 57.563 50.000 0.00 0.00 0.00 4.02
2357 6599 3.529216 TTTTTAAGTAGGGGGTGGTGG 57.471 47.619 0.00 0.00 0.00 4.61
2375 6617 1.539827 GAGGCGGCATACAGTGTTTTT 59.460 47.619 13.08 0.00 0.00 1.94
2376 6618 1.165270 GAGGCGGCATACAGTGTTTT 58.835 50.000 13.08 0.00 0.00 2.43
2377 6619 0.324943 AGAGGCGGCATACAGTGTTT 59.675 50.000 13.08 0.00 0.00 2.83
2378 6620 0.108138 GAGAGGCGGCATACAGTGTT 60.108 55.000 13.08 0.00 0.00 3.32
2379 6621 1.517832 GAGAGGCGGCATACAGTGT 59.482 57.895 13.08 0.00 0.00 3.55
2380 6622 1.227380 GGAGAGGCGGCATACAGTG 60.227 63.158 13.08 0.00 0.00 3.66
2381 6623 1.381872 AGGAGAGGCGGCATACAGT 60.382 57.895 13.08 0.00 0.00 3.55
2382 6624 1.112315 AGAGGAGAGGCGGCATACAG 61.112 60.000 13.08 0.00 0.00 2.74
2383 6625 1.075970 AGAGGAGAGGCGGCATACA 60.076 57.895 13.08 0.00 0.00 2.29
2384 6626 1.663173 GAGAGGAGAGGCGGCATAC 59.337 63.158 13.08 0.00 0.00 2.39
2385 6627 1.899054 CGAGAGGAGAGGCGGCATA 60.899 63.158 13.08 0.00 0.00 3.14
2386 6628 2.992817 ATCGAGAGGAGAGGCGGCAT 62.993 60.000 13.08 0.00 0.00 4.40
2387 6629 3.723097 ATCGAGAGGAGAGGCGGCA 62.723 63.158 13.08 0.00 0.00 5.69
2388 6630 2.909965 ATCGAGAGGAGAGGCGGC 60.910 66.667 0.00 0.00 0.00 6.53
2389 6631 2.265182 GGATCGAGAGGAGAGGCGG 61.265 68.421 0.00 0.00 0.00 6.13
2390 6632 1.527148 TGGATCGAGAGGAGAGGCG 60.527 63.158 0.00 0.00 0.00 5.52
2391 6633 1.460273 GGTGGATCGAGAGGAGAGGC 61.460 65.000 0.00 0.00 0.00 4.70
2392 6634 0.825840 GGGTGGATCGAGAGGAGAGG 60.826 65.000 0.00 0.00 0.00 3.69
2393 6635 0.825840 GGGGTGGATCGAGAGGAGAG 60.826 65.000 0.00 0.00 0.00 3.20
2394 6636 1.230497 GGGGTGGATCGAGAGGAGA 59.770 63.158 0.00 0.00 0.00 3.71
2395 6637 1.834822 GGGGGTGGATCGAGAGGAG 60.835 68.421 0.00 0.00 0.00 3.69
2396 6638 2.282446 GGGGGTGGATCGAGAGGA 59.718 66.667 0.00 0.00 0.00 3.71
2397 6639 1.834822 GAGGGGGTGGATCGAGAGG 60.835 68.421 0.00 0.00 0.00 3.69
2398 6640 1.112315 CAGAGGGGGTGGATCGAGAG 61.112 65.000 0.00 0.00 0.00 3.20
2399 6641 1.075970 CAGAGGGGGTGGATCGAGA 60.076 63.158 0.00 0.00 0.00 4.04
2400 6642 2.136878 CCAGAGGGGGTGGATCGAG 61.137 68.421 0.00 0.00 37.23 4.04
2401 6643 2.041922 CCAGAGGGGGTGGATCGA 60.042 66.667 0.00 0.00 37.23 3.59
2402 6644 3.866582 GCCAGAGGGGGTGGATCG 61.867 72.222 0.00 0.00 37.23 3.69
2409 6651 3.090532 GGTGGTAGCCAGAGGGGG 61.091 72.222 0.00 0.00 37.04 5.40
2410 6652 2.041265 AGGTGGTAGCCAGAGGGG 59.959 66.667 0.00 0.00 40.85 4.79
2411 6653 2.427245 CGAGGTGGTAGCCAGAGGG 61.427 68.421 0.00 0.00 32.34 4.30
2412 6654 3.082579 GCGAGGTGGTAGCCAGAGG 62.083 68.421 0.00 0.00 32.34 3.69
2413 6655 2.010582 GAGCGAGGTGGTAGCCAGAG 62.011 65.000 0.00 0.00 32.34 3.35
2414 6656 2.037367 AGCGAGGTGGTAGCCAGA 59.963 61.111 0.00 0.00 32.34 3.86
2415 6657 1.608717 AAGAGCGAGGTGGTAGCCAG 61.609 60.000 0.00 0.00 32.34 4.85
2416 6658 1.192146 AAAGAGCGAGGTGGTAGCCA 61.192 55.000 0.00 0.00 0.00 4.75
2417 6659 0.460459 GAAAGAGCGAGGTGGTAGCC 60.460 60.000 0.00 0.00 0.00 3.93
2418 6660 0.460459 GGAAAGAGCGAGGTGGTAGC 60.460 60.000 0.00 0.00 0.00 3.58
2419 6661 0.175989 GGGAAAGAGCGAGGTGGTAG 59.824 60.000 0.00 0.00 0.00 3.18
2420 6662 0.252103 AGGGAAAGAGCGAGGTGGTA 60.252 55.000 0.00 0.00 0.00 3.25
2421 6663 1.536662 AGGGAAAGAGCGAGGTGGT 60.537 57.895 0.00 0.00 0.00 4.16
2422 6664 1.219393 GAGGGAAAGAGCGAGGTGG 59.781 63.158 0.00 0.00 0.00 4.61
2423 6665 1.219393 GGAGGGAAAGAGCGAGGTG 59.781 63.158 0.00 0.00 0.00 4.00
2424 6666 0.973496 GAGGAGGGAAAGAGCGAGGT 60.973 60.000 0.00 0.00 0.00 3.85
2425 6667 0.686112 AGAGGAGGGAAAGAGCGAGG 60.686 60.000 0.00 0.00 0.00 4.63
2426 6668 0.744281 GAGAGGAGGGAAAGAGCGAG 59.256 60.000 0.00 0.00 0.00 5.03
2427 6669 0.039764 TGAGAGGAGGGAAAGAGCGA 59.960 55.000 0.00 0.00 0.00 4.93
2428 6670 0.174617 GTGAGAGGAGGGAAAGAGCG 59.825 60.000 0.00 0.00 0.00 5.03
2429 6671 0.174617 CGTGAGAGGAGGGAAAGAGC 59.825 60.000 0.00 0.00 0.00 4.09
2430 6672 0.174617 GCGTGAGAGGAGGGAAAGAG 59.825 60.000 0.00 0.00 0.00 2.85
2431 6673 0.251832 AGCGTGAGAGGAGGGAAAGA 60.252 55.000 0.00 0.00 0.00 2.52
2432 6674 0.174617 GAGCGTGAGAGGAGGGAAAG 59.825 60.000 0.00 0.00 0.00 2.62
2433 6675 1.258445 GGAGCGTGAGAGGAGGGAAA 61.258 60.000 0.00 0.00 0.00 3.13
2434 6676 1.682684 GGAGCGTGAGAGGAGGGAA 60.683 63.158 0.00 0.00 0.00 3.97
2435 6677 2.043852 GGAGCGTGAGAGGAGGGA 60.044 66.667 0.00 0.00 0.00 4.20
2436 6678 2.363018 TGGAGCGTGAGAGGAGGG 60.363 66.667 0.00 0.00 0.00 4.30
2437 6679 2.716017 GGTGGAGCGTGAGAGGAGG 61.716 68.421 0.00 0.00 0.00 4.30
2438 6680 2.888863 GGTGGAGCGTGAGAGGAG 59.111 66.667 0.00 0.00 0.00 3.69
2439 6681 3.062466 CGGTGGAGCGTGAGAGGA 61.062 66.667 0.00 0.00 0.00 3.71
2440 6682 4.803426 GCGGTGGAGCGTGAGAGG 62.803 72.222 0.00 0.00 0.00 3.69
2441 6683 4.803426 GGCGGTGGAGCGTGAGAG 62.803 72.222 0.00 0.00 38.18 3.20



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.