Multiple sequence alignment - TraesCS5A01G297900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G297900 chr5A 100.000 5298 0 0 1 5298 505502022 505507319 0.000000e+00 9784
1 TraesCS5A01G297900 chr5A 95.979 373 13 2 3519 3890 450158096 450158467 5.870000e-169 604
2 TraesCS5A01G297900 chr5B 93.285 2755 106 33 3 2739 479825590 479828283 0.000000e+00 3989
3 TraesCS5A01G297900 chr5B 92.748 979 54 9 3894 4863 479828977 479829947 0.000000e+00 1399
4 TraesCS5A01G297900 chr5B 91.748 618 27 6 2900 3517 479828389 479828982 0.000000e+00 837
5 TraesCS5A01G297900 chr5B 85.450 378 16 19 4928 5298 479830370 479830715 1.810000e-94 357
6 TraesCS5A01G297900 chr5B 95.181 83 4 0 2820 2902 479828281 479828363 1.200000e-26 132
7 TraesCS5A01G297900 chr5D 92.791 2788 96 40 3 2739 399945267 399948000 0.000000e+00 3938
8 TraesCS5A01G297900 chr5D 88.153 1435 87 28 3892 5298 399948693 399950072 0.000000e+00 1631
9 TraesCS5A01G297900 chr5D 93.031 617 20 7 2900 3516 399948106 399948699 0.000000e+00 880
10 TraesCS5A01G297900 chr5D 98.795 83 1 0 2820 2902 399947998 399948080 1.190000e-31 148
11 TraesCS5A01G297900 chr5D 97.674 86 2 0 2737 2822 453867950 453867865 1.190000e-31 148
12 TraesCS5A01G297900 chr1A 97.849 372 8 0 3519 3890 51979651 51980022 1.240000e-180 643
13 TraesCS5A01G297900 chr2A 97.581 372 7 2 3519 3890 756106789 756106420 2.080000e-178 636
14 TraesCS5A01G297900 chr2A 95.148 371 14 3 3519 3886 755687381 755687012 2.750000e-162 582
15 TraesCS5A01G297900 chr2A 94.681 94 5 0 2736 2829 69386040 69385947 4.280000e-31 147
16 TraesCS5A01G297900 chr3D 94.974 378 18 1 3514 3890 582214256 582213879 4.570000e-165 592
17 TraesCS5A01G297900 chr3D 93.878 98 6 0 2733 2830 23941562 23941465 1.190000e-31 148
18 TraesCS5A01G297900 chr6A 94.709 378 14 4 3519 3890 617185635 617186012 2.750000e-162 582
19 TraesCS5A01G297900 chr2B 94.892 372 19 0 3519 3890 798805070 798804699 2.750000e-162 582
20 TraesCS5A01G297900 chr7A 94.638 373 18 2 3519 3890 34967442 34967813 1.280000e-160 577
21 TraesCS5A01G297900 chr7A 85.714 287 41 0 2362 2648 270763544 270763258 2.400000e-78 303
22 TraesCS5A01G297900 chrUn 94.149 376 16 5 3517 3890 33372490 33372119 7.700000e-158 568
23 TraesCS5A01G297900 chr7D 86.063 287 40 0 2362 2648 250670893 250671179 5.150000e-80 309
24 TraesCS5A01G297900 chr7D 97.647 85 2 0 2737 2821 221689819 221689735 4.280000e-31 147
25 TraesCS5A01G297900 chr7D 95.604 91 3 1 2732 2822 310968304 310968215 1.540000e-30 145
26 TraesCS5A01G297900 chr7D 96.471 85 3 0 2737 2821 221585381 221585297 1.990000e-29 141
27 TraesCS5A01G297900 chr7B 85.714 287 41 0 2362 2648 227282175 227282461 2.400000e-78 303
28 TraesCS5A01G297900 chr7B 78.044 501 81 17 1748 2238 227281562 227282043 6.710000e-74 289
29 TraesCS5A01G297900 chr1D 93.878 98 5 1 2725 2821 50021590 50021687 4.280000e-31 147
30 TraesCS5A01G297900 chr4B 93.814 97 5 1 2735 2831 30369976 30370071 1.540000e-30 145
31 TraesCS5A01G297900 chr4A 89.474 114 7 5 2712 2821 24824431 24824543 7.150000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G297900 chr5A 505502022 505507319 5297 False 9784.00 9784 100.0000 1 5298 1 chr5A.!!$F2 5297
1 TraesCS5A01G297900 chr5B 479825590 479830715 5125 False 1342.80 3989 91.6824 3 5298 5 chr5B.!!$F1 5295
2 TraesCS5A01G297900 chr5D 399945267 399950072 4805 False 1649.25 3938 93.1925 3 5298 4 chr5D.!!$F1 5295
3 TraesCS5A01G297900 chr7B 227281562 227282461 899 False 296.00 303 81.8790 1748 2648 2 chr7B.!!$F1 900

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
397 415 0.184692 TGTCCAACTTGGTGCCATCA 59.815 50.000 7.72 0.00 39.03 3.07 F
618 637 1.188863 AAAAGAGCATGGCCCATGTC 58.811 50.000 24.13 18.74 43.10 3.06 F
2626 2692 0.108019 GTGTCCTTGGAACCTTCGGT 59.892 55.000 0.00 0.00 37.65 4.69 F
2753 2822 2.218673 AGATACTCCCTCTGTCCCAGA 58.781 52.381 0.00 0.00 38.25 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1797 1821 0.039618 TTTCAATGGGAGGAGGTGCC 59.960 55.000 0.00 0.0 37.11 5.01 R
2745 2814 7.662258 TCAAAAACGTTCTTATATTCTGGGACA 59.338 33.333 0.00 0.0 0.00 4.02 R
3519 3616 0.036294 GAGCTCCAAAACGCCCTACT 60.036 55.000 0.87 0.0 0.00 2.57 R
4396 4508 0.182775 ACAGCCCCGTTCTTGAACTT 59.817 50.000 11.11 0.0 0.00 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 44 1.153549 CTGAGCCTACCGCCTTCAC 60.154 63.158 0.00 0.00 38.78 3.18
56 63 1.506718 CTGCTGCTGCTTGTCATGG 59.493 57.895 17.00 0.00 40.48 3.66
58 65 0.824595 TGCTGCTGCTTGTCATGGTT 60.825 50.000 17.00 0.00 40.48 3.67
81 88 2.046700 GGGGGCGTCGTCATTTCA 60.047 61.111 0.00 0.00 0.00 2.69
82 89 2.396157 GGGGGCGTCGTCATTTCAC 61.396 63.158 0.00 0.00 0.00 3.18
112 119 0.754957 TTGGTGCCCAACTTGGTCTG 60.755 55.000 7.06 0.00 38.75 3.51
113 120 1.903404 GGTGCCCAACTTGGTCTGG 60.903 63.158 7.06 0.00 35.17 3.86
114 121 1.152756 GTGCCCAACTTGGTCTGGT 60.153 57.895 7.06 0.00 35.17 4.00
116 123 0.467290 TGCCCAACTTGGTCTGGTTC 60.467 55.000 7.06 0.00 35.17 3.62
117 124 0.467290 GCCCAACTTGGTCTGGTTCA 60.467 55.000 7.06 0.00 35.17 3.18
119 126 1.609208 CCAACTTGGTCTGGTTCAGG 58.391 55.000 0.00 0.00 31.35 3.86
121 128 1.142870 CAACTTGGTCTGGTTCAGGGA 59.857 52.381 0.00 0.00 31.51 4.20
122 129 1.059913 ACTTGGTCTGGTTCAGGGAG 58.940 55.000 0.00 0.00 31.51 4.30
123 130 0.326264 CTTGGTCTGGTTCAGGGAGG 59.674 60.000 0.00 0.00 31.51 4.30
124 131 0.401395 TTGGTCTGGTTCAGGGAGGT 60.401 55.000 0.00 0.00 31.51 3.85
125 132 0.836400 TGGTCTGGTTCAGGGAGGTC 60.836 60.000 0.00 0.00 31.51 3.85
127 134 0.899019 GTCTGGTTCAGGGAGGTCTC 59.101 60.000 0.00 0.00 31.51 3.36
128 135 0.612174 TCTGGTTCAGGGAGGTCTCG 60.612 60.000 0.00 0.00 31.51 4.04
130 137 0.898789 TGGTTCAGGGAGGTCTCGTC 60.899 60.000 0.00 0.00 0.00 4.20
131 138 1.507174 GTTCAGGGAGGTCTCGTCG 59.493 63.158 0.00 0.00 0.00 5.12
132 139 1.074423 TTCAGGGAGGTCTCGTCGT 59.926 57.895 0.00 0.00 0.00 4.34
133 140 0.959372 TTCAGGGAGGTCTCGTCGTC 60.959 60.000 0.00 0.00 0.00 4.20
134 141 1.377463 CAGGGAGGTCTCGTCGTCT 60.377 63.158 0.00 0.00 0.00 4.18
135 142 1.078285 AGGGAGGTCTCGTCGTCTC 60.078 63.158 0.00 0.00 0.00 3.36
136 143 2.114051 GGGAGGTCTCGTCGTCTCC 61.114 68.421 13.89 13.89 43.65 3.71
137 144 1.376942 GGAGGTCTCGTCGTCTCCA 60.377 63.158 15.92 0.00 43.78 3.86
138 145 0.959372 GGAGGTCTCGTCGTCTCCAA 60.959 60.000 15.92 0.00 43.78 3.53
139 146 1.096416 GAGGTCTCGTCGTCTCCAAT 58.904 55.000 0.00 0.00 0.00 3.16
140 147 1.473278 GAGGTCTCGTCGTCTCCAATT 59.527 52.381 0.00 0.00 0.00 2.32
141 148 1.893801 AGGTCTCGTCGTCTCCAATTT 59.106 47.619 0.00 0.00 0.00 1.82
164 171 2.221981 CGCTTTCAGTTCAGACTTCCAC 59.778 50.000 0.00 0.00 32.54 4.02
189 201 7.824779 ACTCTTGGATTGTAGTAATTGAGGTTC 59.175 37.037 0.00 0.00 0.00 3.62
218 234 4.880120 CACTGGTTCATCATCAGCTTATGT 59.120 41.667 7.73 0.00 32.19 2.29
255 271 0.308684 ACGCAGACAATGTGCACTTG 59.691 50.000 19.41 20.07 43.57 3.16
297 313 3.067461 AGGTTGCGCATAAACTGAAACAA 59.933 39.130 12.75 0.00 0.00 2.83
298 314 3.799420 GGTTGCGCATAAACTGAAACAAA 59.201 39.130 12.75 0.00 0.00 2.83
299 315 4.317769 GGTTGCGCATAAACTGAAACAAAC 60.318 41.667 12.75 0.00 0.00 2.93
300 316 4.033990 TGCGCATAAACTGAAACAAACA 57.966 36.364 5.66 0.00 0.00 2.83
301 317 4.041049 TGCGCATAAACTGAAACAAACAG 58.959 39.130 5.66 0.00 40.68 3.16
303 319 4.146443 GCGCATAAACTGAAACAAACAGTC 59.854 41.667 0.30 0.00 46.01 3.51
304 320 4.675114 CGCATAAACTGAAACAAACAGTCC 59.325 41.667 0.00 0.00 46.01 3.85
315 331 7.254852 TGAAACAAACAGTCCAACAGAAATAC 58.745 34.615 0.00 0.00 0.00 1.89
337 353 3.407046 GAGATTGCCTTGCCTGCGC 62.407 63.158 0.00 0.00 0.00 6.09
349 367 2.571757 CTGCGCCGGTCTGTCTAA 59.428 61.111 4.18 0.00 0.00 2.10
352 370 2.885861 CGCCGGTCTGTCTAAGCT 59.114 61.111 1.90 0.00 0.00 3.74
379 397 2.745821 TGCTCTGCTTTGTTCTAGCATG 59.254 45.455 0.00 0.00 46.63 4.06
387 405 4.022849 GCTTTGTTCTAGCATGTCCAACTT 60.023 41.667 0.00 0.00 38.51 2.66
397 415 0.184692 TGTCCAACTTGGTGCCATCA 59.815 50.000 7.72 0.00 39.03 3.07
398 416 1.327303 GTCCAACTTGGTGCCATCAA 58.673 50.000 7.72 0.00 39.03 2.57
445 463 4.536364 TTTTCTGCTTTCAGTTCAGACG 57.464 40.909 0.00 0.00 41.10 4.18
540 559 4.290155 ACTGAAAATGACAACGCATGAAC 58.710 39.130 0.00 0.00 0.00 3.18
549 568 2.094539 CGCATGAACGTGCACTCG 59.905 61.111 16.19 5.07 45.30 4.18
559 578 2.124529 TGCACTCGTGGTTTGGCA 60.125 55.556 0.00 0.00 0.00 4.92
618 637 1.188863 AAAAGAGCATGGCCCATGTC 58.811 50.000 24.13 18.74 43.10 3.06
728 748 1.226746 GGCGCTGAGTGTTTACTTGT 58.773 50.000 7.64 0.00 37.25 3.16
754 774 3.181476 ACTGATTGTCAAAACTTGGTGCC 60.181 43.478 0.00 0.00 0.00 5.01
756 776 2.957491 TTGTCAAAACTTGGTGCCAG 57.043 45.000 0.00 0.00 0.00 4.85
791 811 4.835284 TCCCAGTCAGTGCATATGTAAA 57.165 40.909 4.29 0.00 0.00 2.01
792 812 5.172687 TCCCAGTCAGTGCATATGTAAAA 57.827 39.130 4.29 0.00 0.00 1.52
855 875 8.699283 AGTAATAGTTTTTGTCACTCGGATAC 57.301 34.615 0.00 0.00 0.00 2.24
941 961 5.016173 CCAGAATGTTCTTGTATTTCCCCA 58.984 41.667 0.00 0.00 34.74 4.96
949 969 8.028652 TGTTCTTGTATTTCCCCATTTTTCTT 57.971 30.769 0.00 0.00 0.00 2.52
1134 1154 5.011090 TGCTGTCTCGTAATTAATCAGCT 57.989 39.130 18.38 0.00 44.42 4.24
1296 1316 9.393249 TCTTGTTCGCTTTCAGTTTATTTAATG 57.607 29.630 0.00 0.00 0.00 1.90
1419 1439 2.779430 TCTCCACCCAGCATGTATTGAT 59.221 45.455 0.00 0.00 0.00 2.57
1475 1495 5.475909 AGCATGAGCACCAAAATGGATATAG 59.524 40.000 2.85 0.00 45.49 1.31
1551 1571 6.728200 TCTTTCACTTCAAGTTAGTGCATTG 58.272 36.000 0.00 0.00 42.12 2.82
1565 1585 3.875727 AGTGCATTGTCAGCATAGTCATC 59.124 43.478 0.00 0.00 44.79 2.92
1620 1644 2.093869 GCTGAACCCTGTAATGTACGGA 60.094 50.000 0.00 0.00 37.22 4.69
1735 1759 4.081142 GTGCTTTTGTTATTGGGGCCTAAT 60.081 41.667 19.59 19.59 0.00 1.73
1797 1821 6.514947 TGATTCCAAAAGTGATCCAACAAAG 58.485 36.000 0.00 0.00 0.00 2.77
2074 2127 9.431887 GTACTTTTTGTATGACTACAATCCTCA 57.568 33.333 0.00 0.00 44.99 3.86
2238 2291 9.797642 TTCTCTACATGATATTTTGCATGGTAT 57.202 29.630 0.00 0.00 44.64 2.73
2270 2323 4.395854 TGTTATGCAATCTGTTAGCCTGTG 59.604 41.667 0.00 0.00 0.00 3.66
2626 2692 0.108019 GTGTCCTTGGAACCTTCGGT 59.892 55.000 0.00 0.00 37.65 4.69
2716 2785 7.181361 TGTTTCAAGATTTTGAGATATCCCCA 58.819 34.615 0.00 0.00 43.76 4.96
2750 2819 8.896722 TTATTATAAGATACTCCCTCTGTCCC 57.103 38.462 0.00 0.00 0.00 4.46
2751 2820 4.834406 ATAAGATACTCCCTCTGTCCCA 57.166 45.455 0.00 0.00 0.00 4.37
2752 2821 2.765689 AGATACTCCCTCTGTCCCAG 57.234 55.000 0.00 0.00 0.00 4.45
2753 2822 2.218673 AGATACTCCCTCTGTCCCAGA 58.781 52.381 0.00 0.00 38.25 3.86
2754 2823 2.587777 AGATACTCCCTCTGTCCCAGAA 59.412 50.000 0.00 0.00 40.18 3.02
2755 2824 3.208692 AGATACTCCCTCTGTCCCAGAAT 59.791 47.826 0.00 0.00 40.18 2.40
2756 2825 4.420552 AGATACTCCCTCTGTCCCAGAATA 59.579 45.833 0.00 0.00 40.18 1.75
2757 2826 3.715648 ACTCCCTCTGTCCCAGAATAT 57.284 47.619 0.00 0.00 40.18 1.28
2758 2827 4.834406 ACTCCCTCTGTCCCAGAATATA 57.166 45.455 0.00 0.00 40.18 0.86
2759 2828 5.157770 ACTCCCTCTGTCCCAGAATATAA 57.842 43.478 0.00 0.00 40.18 0.98
2760 2829 5.151454 ACTCCCTCTGTCCCAGAATATAAG 58.849 45.833 0.00 0.00 40.18 1.73
2761 2830 5.103043 ACTCCCTCTGTCCCAGAATATAAGA 60.103 44.000 0.00 0.00 40.18 2.10
2762 2831 5.788430 TCCCTCTGTCCCAGAATATAAGAA 58.212 41.667 0.00 0.00 40.18 2.52
2763 2832 5.602978 TCCCTCTGTCCCAGAATATAAGAAC 59.397 44.000 0.00 0.00 40.18 3.01
2764 2833 5.509840 CCCTCTGTCCCAGAATATAAGAACG 60.510 48.000 0.00 0.00 40.18 3.95
2765 2834 5.069251 CCTCTGTCCCAGAATATAAGAACGT 59.931 44.000 0.00 0.00 40.18 3.99
2766 2835 6.407074 CCTCTGTCCCAGAATATAAGAACGTT 60.407 42.308 0.00 0.00 40.18 3.99
2767 2836 6.942976 TCTGTCCCAGAATATAAGAACGTTT 58.057 36.000 0.46 0.00 37.57 3.60
2768 2837 7.391620 TCTGTCCCAGAATATAAGAACGTTTT 58.608 34.615 0.46 0.00 37.57 2.43
2769 2838 7.881232 TCTGTCCCAGAATATAAGAACGTTTTT 59.119 33.333 9.22 9.22 37.57 1.94
2770 2839 7.812648 TGTCCCAGAATATAAGAACGTTTTTG 58.187 34.615 13.87 0.00 0.00 2.44
2771 2840 7.662258 TGTCCCAGAATATAAGAACGTTTTTGA 59.338 33.333 13.87 2.81 0.00 2.69
2772 2841 7.961283 GTCCCAGAATATAAGAACGTTTTTGAC 59.039 37.037 13.87 5.89 0.00 3.18
2773 2842 7.662258 TCCCAGAATATAAGAACGTTTTTGACA 59.338 33.333 13.87 0.01 0.00 3.58
2774 2843 7.749126 CCCAGAATATAAGAACGTTTTTGACAC 59.251 37.037 13.87 2.84 0.00 3.67
2775 2844 8.504005 CCAGAATATAAGAACGTTTTTGACACT 58.496 33.333 13.87 4.79 0.00 3.55
2779 2848 9.769093 AATATAAGAACGTTTTTGACACTATGC 57.231 29.630 13.87 0.00 0.00 3.14
2780 2849 5.751243 AAGAACGTTTTTGACACTATGCT 57.249 34.783 0.46 0.00 0.00 3.79
2781 2850 6.854496 AAGAACGTTTTTGACACTATGCTA 57.146 33.333 0.46 0.00 0.00 3.49
2782 2851 6.854496 AGAACGTTTTTGACACTATGCTAA 57.146 33.333 0.46 0.00 0.00 3.09
2783 2852 7.435068 AGAACGTTTTTGACACTATGCTAAT 57.565 32.000 0.46 0.00 0.00 1.73
2784 2853 7.298122 AGAACGTTTTTGACACTATGCTAATG 58.702 34.615 0.46 0.00 0.00 1.90
2785 2854 6.554334 ACGTTTTTGACACTATGCTAATGT 57.446 33.333 0.00 0.00 0.00 2.71
2786 2855 6.966021 ACGTTTTTGACACTATGCTAATGTT 58.034 32.000 0.00 0.00 0.00 2.71
2787 2856 8.090250 ACGTTTTTGACACTATGCTAATGTTA 57.910 30.769 0.00 0.00 0.00 2.41
2788 2857 8.561212 ACGTTTTTGACACTATGCTAATGTTAA 58.439 29.630 0.00 0.00 0.00 2.01
2789 2858 9.388346 CGTTTTTGACACTATGCTAATGTTAAA 57.612 29.630 0.00 0.00 32.08 1.52
2815 2884 8.482852 AATGTTCTTATATTTTGGGATGGAGG 57.517 34.615 0.00 0.00 0.00 4.30
2816 2885 6.372931 TGTTCTTATATTTTGGGATGGAGGG 58.627 40.000 0.00 0.00 0.00 4.30
2817 2886 6.161348 TGTTCTTATATTTTGGGATGGAGGGA 59.839 38.462 0.00 0.00 0.00 4.20
2818 2887 6.454223 TCTTATATTTTGGGATGGAGGGAG 57.546 41.667 0.00 0.00 0.00 4.30
3283 3380 5.602458 ACATAATACAATGAGAGCATGCG 57.398 39.130 13.01 0.00 34.26 4.73
3310 3407 4.217550 GCAACAAGAGTAGGGCATTAACAA 59.782 41.667 0.00 0.00 0.00 2.83
3341 3438 4.511826 GTCAACGGTTTGAACTTCAGAGAT 59.488 41.667 0.00 0.00 43.52 2.75
3342 3439 4.511454 TCAACGGTTTGAACTTCAGAGATG 59.489 41.667 0.00 0.00 38.87 2.90
3354 3451 8.791675 TGAACTTCAGAGATGCTCATACTATAG 58.208 37.037 0.00 0.00 32.06 1.31
3388 3485 7.395772 TCATGTAAACAAGCATAGAAAATGGGA 59.604 33.333 0.00 0.00 0.00 4.37
3405 3502 8.993404 AAAATGGGAGGAATTTGAATCAAAAA 57.007 26.923 12.75 0.00 36.90 1.94
3482 3579 4.021807 TGCTTTGTGTTCCTGTACTATCGA 60.022 41.667 0.00 0.00 0.00 3.59
3493 3590 8.899776 GTTCCTGTACTATCGATTTACATAACG 58.100 37.037 15.97 7.83 0.00 3.18
3496 3593 9.454585 CCTGTACTATCGATTTACATAACGAAA 57.545 33.333 15.97 0.00 38.22 3.46
3517 3614 8.926710 ACGAAACTATTCTAAGTTGTCTGATTG 58.073 33.333 0.00 0.00 39.62 2.67
3519 3616 9.436957 GAAACTATTCTAAGTTGTCTGATTGGA 57.563 33.333 0.00 0.00 39.62 3.53
3520 3617 9.442047 AAACTATTCTAAGTTGTCTGATTGGAG 57.558 33.333 0.00 0.00 39.62 3.86
3523 3620 9.743057 CTATTCTAAGTTGTCTGATTGGAGTAG 57.257 37.037 0.00 0.00 0.00 2.57
3524 3621 6.531503 TCTAAGTTGTCTGATTGGAGTAGG 57.468 41.667 0.00 0.00 0.00 3.18
3525 3622 4.559862 AAGTTGTCTGATTGGAGTAGGG 57.440 45.455 0.00 0.00 0.00 3.53
3526 3623 2.237392 AGTTGTCTGATTGGAGTAGGGC 59.763 50.000 0.00 0.00 0.00 5.19
3527 3624 0.824109 TGTCTGATTGGAGTAGGGCG 59.176 55.000 0.00 0.00 0.00 6.13
3528 3625 0.824759 GTCTGATTGGAGTAGGGCGT 59.175 55.000 0.00 0.00 0.00 5.68
3529 3626 1.207329 GTCTGATTGGAGTAGGGCGTT 59.793 52.381 0.00 0.00 0.00 4.84
3530 3627 1.906574 TCTGATTGGAGTAGGGCGTTT 59.093 47.619 0.00 0.00 0.00 3.60
3531 3628 2.304761 TCTGATTGGAGTAGGGCGTTTT 59.695 45.455 0.00 0.00 0.00 2.43
3532 3629 2.420022 CTGATTGGAGTAGGGCGTTTTG 59.580 50.000 0.00 0.00 0.00 2.44
3533 3630 1.743394 GATTGGAGTAGGGCGTTTTGG 59.257 52.381 0.00 0.00 0.00 3.28
3534 3631 0.766131 TTGGAGTAGGGCGTTTTGGA 59.234 50.000 0.00 0.00 0.00 3.53
3535 3632 0.323629 TGGAGTAGGGCGTTTTGGAG 59.676 55.000 0.00 0.00 0.00 3.86
3536 3633 1.025113 GGAGTAGGGCGTTTTGGAGC 61.025 60.000 0.00 0.00 0.00 4.70
3537 3634 0.036294 GAGTAGGGCGTTTTGGAGCT 60.036 55.000 0.00 0.00 0.00 4.09
3538 3635 0.036294 AGTAGGGCGTTTTGGAGCTC 60.036 55.000 4.71 4.71 0.00 4.09
3539 3636 1.079405 TAGGGCGTTTTGGAGCTCG 60.079 57.895 7.83 0.00 39.21 5.03
3540 3637 2.515996 TAGGGCGTTTTGGAGCTCGG 62.516 60.000 7.83 0.00 39.21 4.63
3541 3638 4.103103 GGCGTTTTGGAGCTCGGC 62.103 66.667 7.83 4.17 41.00 5.54
3542 3639 4.103103 GCGTTTTGGAGCTCGGCC 62.103 66.667 7.83 0.00 0.00 6.13
3543 3640 2.358737 CGTTTTGGAGCTCGGCCT 60.359 61.111 7.83 0.00 0.00 5.19
3544 3641 2.391389 CGTTTTGGAGCTCGGCCTC 61.391 63.158 7.83 0.00 0.00 4.70
3550 3647 3.157252 GAGCTCGGCCTCCATGGA 61.157 66.667 15.27 15.27 38.35 3.41
3551 3648 3.160047 AGCTCGGCCTCCATGGAG 61.160 66.667 31.69 31.69 41.63 3.86
3559 3656 3.244616 CTCCATGGAGGCCGGATT 58.755 61.111 31.14 0.00 38.51 3.01
3560 3657 1.533711 CTCCATGGAGGCCGGATTT 59.466 57.895 31.14 0.00 38.51 2.17
3561 3658 0.106519 CTCCATGGAGGCCGGATTTT 60.107 55.000 31.14 0.00 38.51 1.82
3562 3659 0.334676 TCCATGGAGGCCGGATTTTT 59.665 50.000 11.44 0.00 37.29 1.94
3589 3686 9.778993 TGAAAATTTCAAAATTCGCATTTTTCA 57.221 22.222 5.87 1.05 40.09 2.69
3595 3692 9.778993 TTTCAAAATTCGCATTTTTCAATTTCA 57.221 22.222 2.88 0.00 40.09 2.69
3596 3693 9.778993 TTCAAAATTCGCATTTTTCAATTTCAA 57.221 22.222 2.88 0.00 40.09 2.69
3597 3694 9.778993 TCAAAATTCGCATTTTTCAATTTCAAA 57.221 22.222 2.88 0.00 40.09 2.69
3634 3731 8.986477 AAAATCATACAAGTAAACAAGGATGC 57.014 30.769 0.00 0.00 0.00 3.91
3635 3732 7.944729 AATCATACAAGTAAACAAGGATGCT 57.055 32.000 0.00 0.00 0.00 3.79
3636 3733 9.461312 AAATCATACAAGTAAACAAGGATGCTA 57.539 29.630 0.00 0.00 0.00 3.49
3637 3734 9.632638 AATCATACAAGTAAACAAGGATGCTAT 57.367 29.630 0.00 0.00 0.00 2.97
3638 3735 8.437360 TCATACAAGTAAACAAGGATGCTATG 57.563 34.615 0.00 0.00 0.00 2.23
3639 3736 8.046708 TCATACAAGTAAACAAGGATGCTATGT 58.953 33.333 0.00 0.00 0.00 2.29
3640 3737 6.500684 ACAAGTAAACAAGGATGCTATGTG 57.499 37.500 0.00 0.00 0.00 3.21
3641 3738 6.003950 ACAAGTAAACAAGGATGCTATGTGT 58.996 36.000 0.00 0.00 0.00 3.72
3642 3739 7.165485 ACAAGTAAACAAGGATGCTATGTGTA 58.835 34.615 0.00 0.00 0.00 2.90
3643 3740 7.663905 ACAAGTAAACAAGGATGCTATGTGTAA 59.336 33.333 0.00 0.00 0.00 2.41
3644 3741 7.849804 AGTAAACAAGGATGCTATGTGTAAG 57.150 36.000 0.00 0.00 0.00 2.34
3645 3742 7.394816 AGTAAACAAGGATGCTATGTGTAAGT 58.605 34.615 0.00 0.00 0.00 2.24
3646 3743 8.537016 AGTAAACAAGGATGCTATGTGTAAGTA 58.463 33.333 0.00 0.00 0.00 2.24
3647 3744 9.326413 GTAAACAAGGATGCTATGTGTAAGTAT 57.674 33.333 0.00 0.00 0.00 2.12
3648 3745 7.792374 AACAAGGATGCTATGTGTAAGTATG 57.208 36.000 0.00 0.00 0.00 2.39
3649 3746 6.889198 ACAAGGATGCTATGTGTAAGTATGT 58.111 36.000 0.00 0.00 0.00 2.29
3650 3747 8.018537 ACAAGGATGCTATGTGTAAGTATGTA 57.981 34.615 0.00 0.00 0.00 2.29
3651 3748 8.482943 ACAAGGATGCTATGTGTAAGTATGTAA 58.517 33.333 0.00 0.00 0.00 2.41
3652 3749 9.325198 CAAGGATGCTATGTGTAAGTATGTAAA 57.675 33.333 0.00 0.00 0.00 2.01
3653 3750 9.899661 AAGGATGCTATGTGTAAGTATGTAAAA 57.100 29.630 0.00 0.00 0.00 1.52
3672 3769 8.893563 TGTAAAATTTGAGGATGAAATACCCT 57.106 30.769 0.00 0.00 28.06 4.34
3673 3770 9.983024 TGTAAAATTTGAGGATGAAATACCCTA 57.017 29.630 0.00 0.00 28.06 3.53
3679 3776 6.959639 TGAGGATGAAATACCCTAAAATGC 57.040 37.500 0.00 0.00 0.00 3.56
3680 3777 5.530915 TGAGGATGAAATACCCTAAAATGCG 59.469 40.000 0.00 0.00 0.00 4.73
3681 3778 5.690865 AGGATGAAATACCCTAAAATGCGA 58.309 37.500 0.00 0.00 0.00 5.10
3682 3779 6.306987 AGGATGAAATACCCTAAAATGCGAT 58.693 36.000 0.00 0.00 0.00 4.58
3683 3780 6.431234 AGGATGAAATACCCTAAAATGCGATC 59.569 38.462 0.00 0.00 0.00 3.69
3684 3781 6.431234 GGATGAAATACCCTAAAATGCGATCT 59.569 38.462 0.00 0.00 0.00 2.75
3685 3782 6.618287 TGAAATACCCTAAAATGCGATCTG 57.382 37.500 0.00 0.00 0.00 2.90
3686 3783 6.119536 TGAAATACCCTAAAATGCGATCTGT 58.880 36.000 0.00 0.00 0.00 3.41
3687 3784 6.038161 TGAAATACCCTAAAATGCGATCTGTG 59.962 38.462 0.00 0.00 0.00 3.66
3688 3785 2.017049 ACCCTAAAATGCGATCTGTGC 58.983 47.619 0.00 0.00 0.00 4.57
3690 3787 2.423185 CCCTAAAATGCGATCTGTGCAA 59.577 45.455 0.00 0.00 46.87 4.08
3691 3788 3.119531 CCCTAAAATGCGATCTGTGCAAA 60.120 43.478 0.00 0.00 46.87 3.68
3692 3789 4.484236 CCTAAAATGCGATCTGTGCAAAA 58.516 39.130 0.00 0.00 46.87 2.44
3693 3790 4.922692 CCTAAAATGCGATCTGTGCAAAAA 59.077 37.500 0.00 0.00 46.87 1.94
3715 3812 8.652810 AAAAAGACAAATTCATGGACTTTGAG 57.347 30.769 16.97 0.00 36.28 3.02
3716 3813 5.972107 AGACAAATTCATGGACTTTGAGG 57.028 39.130 16.97 0.00 36.28 3.86
3717 3814 5.634118 AGACAAATTCATGGACTTTGAGGA 58.366 37.500 16.97 0.00 36.28 3.71
3718 3815 6.251471 AGACAAATTCATGGACTTTGAGGAT 58.749 36.000 16.97 1.57 36.28 3.24
3719 3816 6.152323 AGACAAATTCATGGACTTTGAGGATG 59.848 38.462 16.97 0.00 36.28 3.51
3720 3817 6.012113 ACAAATTCATGGACTTTGAGGATGA 58.988 36.000 16.97 0.00 36.28 2.92
3721 3818 6.494491 ACAAATTCATGGACTTTGAGGATGAA 59.506 34.615 16.97 0.00 36.28 2.57
3722 3819 7.179694 ACAAATTCATGGACTTTGAGGATGAAT 59.820 33.333 16.97 0.00 36.28 2.57
3723 3820 8.689061 CAAATTCATGGACTTTGAGGATGAATA 58.311 33.333 0.00 0.00 35.26 1.75
3724 3821 8.461249 AATTCATGGACTTTGAGGATGAATAG 57.539 34.615 0.00 0.00 0.00 1.73
3725 3822 6.566079 TCATGGACTTTGAGGATGAATAGT 57.434 37.500 0.00 0.00 0.00 2.12
3726 3823 6.351711 TCATGGACTTTGAGGATGAATAGTG 58.648 40.000 0.00 0.00 0.00 2.74
3727 3824 4.517285 TGGACTTTGAGGATGAATAGTGC 58.483 43.478 0.00 0.00 0.00 4.40
3728 3825 4.225942 TGGACTTTGAGGATGAATAGTGCT 59.774 41.667 0.00 0.00 0.00 4.40
3729 3826 4.813697 GGACTTTGAGGATGAATAGTGCTC 59.186 45.833 0.00 0.00 34.97 4.26
3730 3827 4.775236 ACTTTGAGGATGAATAGTGCTCC 58.225 43.478 0.00 0.00 33.63 4.70
3731 3828 4.472833 ACTTTGAGGATGAATAGTGCTCCT 59.527 41.667 0.00 0.00 40.82 3.69
3732 3829 5.663106 ACTTTGAGGATGAATAGTGCTCCTA 59.337 40.000 0.00 0.00 38.24 2.94
3733 3830 5.537300 TTGAGGATGAATAGTGCTCCTAC 57.463 43.478 0.00 0.00 38.24 3.18
3734 3831 4.809193 TGAGGATGAATAGTGCTCCTACT 58.191 43.478 0.00 0.00 38.24 2.57
3735 3832 5.953571 TGAGGATGAATAGTGCTCCTACTA 58.046 41.667 0.00 0.00 38.24 1.82
3736 3833 6.373759 TGAGGATGAATAGTGCTCCTACTAA 58.626 40.000 0.00 0.00 38.24 2.24
3737 3834 6.839134 TGAGGATGAATAGTGCTCCTACTAAA 59.161 38.462 0.00 0.00 38.24 1.85
3738 3835 7.344612 TGAGGATGAATAGTGCTCCTACTAAAA 59.655 37.037 0.00 0.00 38.24 1.52
3739 3836 8.090788 AGGATGAATAGTGCTCCTACTAAAAA 57.909 34.615 0.00 0.00 36.36 1.94
3740 3837 8.207545 AGGATGAATAGTGCTCCTACTAAAAAG 58.792 37.037 0.00 0.00 36.36 2.27
3741 3838 7.041712 GGATGAATAGTGCTCCTACTAAAAAGC 60.042 40.741 0.00 0.00 36.78 3.51
3742 3839 6.113411 TGAATAGTGCTCCTACTAAAAAGCC 58.887 40.000 0.00 0.00 36.78 4.35
3743 3840 5.959583 ATAGTGCTCCTACTAAAAAGCCT 57.040 39.130 0.00 0.00 36.78 4.58
3744 3841 4.209307 AGTGCTCCTACTAAAAAGCCTC 57.791 45.455 0.00 0.00 33.79 4.70
3745 3842 3.583086 AGTGCTCCTACTAAAAAGCCTCA 59.417 43.478 0.00 0.00 33.79 3.86
3746 3843 3.935828 GTGCTCCTACTAAAAAGCCTCAG 59.064 47.826 0.00 0.00 33.79 3.35
3747 3844 3.838317 TGCTCCTACTAAAAAGCCTCAGA 59.162 43.478 0.00 0.00 33.79 3.27
3748 3845 4.471386 TGCTCCTACTAAAAAGCCTCAGAT 59.529 41.667 0.00 0.00 33.79 2.90
3749 3846 5.045578 TGCTCCTACTAAAAAGCCTCAGATT 60.046 40.000 0.00 0.00 33.79 2.40
3750 3847 5.883115 GCTCCTACTAAAAAGCCTCAGATTT 59.117 40.000 0.00 0.00 31.52 2.17
3751 3848 6.183360 GCTCCTACTAAAAAGCCTCAGATTTG 60.183 42.308 0.00 0.00 30.45 2.32
3752 3849 6.779860 TCCTACTAAAAAGCCTCAGATTTGT 58.220 36.000 0.00 0.00 30.45 2.83
3753 3850 7.231467 TCCTACTAAAAAGCCTCAGATTTGTT 58.769 34.615 0.00 0.00 30.45 2.83
3754 3851 7.390718 TCCTACTAAAAAGCCTCAGATTTGTTC 59.609 37.037 0.00 0.00 30.45 3.18
3755 3852 7.391833 CCTACTAAAAAGCCTCAGATTTGTTCT 59.608 37.037 0.00 0.00 30.45 3.01
3756 3853 7.588497 ACTAAAAAGCCTCAGATTTGTTCTT 57.412 32.000 0.00 0.00 30.45 2.52
3757 3854 8.011844 ACTAAAAAGCCTCAGATTTGTTCTTT 57.988 30.769 0.00 0.00 30.45 2.52
3758 3855 8.478066 ACTAAAAAGCCTCAGATTTGTTCTTTT 58.522 29.630 0.00 0.00 30.45 2.27
3759 3856 9.317936 CTAAAAAGCCTCAGATTTGTTCTTTTT 57.682 29.630 18.76 18.76 39.05 1.94
3760 3857 7.543947 AAAAGCCTCAGATTTGTTCTTTTTG 57.456 32.000 0.00 0.00 30.45 2.44
3761 3858 5.859205 AGCCTCAGATTTGTTCTTTTTGT 57.141 34.783 0.00 0.00 29.93 2.83
3762 3859 5.594926 AGCCTCAGATTTGTTCTTTTTGTG 58.405 37.500 0.00 0.00 29.93 3.33
3763 3860 5.127682 AGCCTCAGATTTGTTCTTTTTGTGT 59.872 36.000 0.00 0.00 29.93 3.72
3764 3861 6.321181 AGCCTCAGATTTGTTCTTTTTGTGTA 59.679 34.615 0.00 0.00 29.93 2.90
3765 3862 6.638468 GCCTCAGATTTGTTCTTTTTGTGTAG 59.362 38.462 0.00 0.00 29.93 2.74
3766 3863 6.638468 CCTCAGATTTGTTCTTTTTGTGTAGC 59.362 38.462 0.00 0.00 29.93 3.58
3767 3864 7.094508 TCAGATTTGTTCTTTTTGTGTAGCA 57.905 32.000 0.00 0.00 29.93 3.49
3768 3865 6.972328 TCAGATTTGTTCTTTTTGTGTAGCAC 59.028 34.615 0.00 0.00 29.93 4.40
3769 3866 6.974622 CAGATTTGTTCTTTTTGTGTAGCACT 59.025 34.615 0.90 0.00 31.39 4.40
3770 3867 7.166473 CAGATTTGTTCTTTTTGTGTAGCACTC 59.834 37.037 0.90 0.00 31.39 3.51
3771 3868 5.888691 TTGTTCTTTTTGTGTAGCACTCA 57.111 34.783 0.90 0.00 35.11 3.41
3772 3869 6.449635 TTGTTCTTTTTGTGTAGCACTCAT 57.550 33.333 0.90 0.00 35.11 2.90
3773 3870 6.449635 TGTTCTTTTTGTGTAGCACTCATT 57.550 33.333 0.90 0.00 35.11 2.57
3774 3871 6.862209 TGTTCTTTTTGTGTAGCACTCATTT 58.138 32.000 0.90 0.00 35.11 2.32
3775 3872 7.319646 TGTTCTTTTTGTGTAGCACTCATTTT 58.680 30.769 0.90 0.00 35.11 1.82
3776 3873 8.462811 TGTTCTTTTTGTGTAGCACTCATTTTA 58.537 29.630 0.90 0.00 35.11 1.52
3777 3874 9.296400 GTTCTTTTTGTGTAGCACTCATTTTAA 57.704 29.630 0.90 0.00 35.11 1.52
3778 3875 9.515020 TTCTTTTTGTGTAGCACTCATTTTAAG 57.485 29.630 0.90 0.00 35.11 1.85
3779 3876 8.134895 TCTTTTTGTGTAGCACTCATTTTAAGG 58.865 33.333 0.90 0.00 35.11 2.69
3780 3877 6.952773 TTTGTGTAGCACTCATTTTAAGGT 57.047 33.333 0.90 0.00 35.11 3.50
3781 3878 5.940192 TGTGTAGCACTCATTTTAAGGTG 57.060 39.130 0.90 0.00 35.11 4.00
3782 3879 5.373222 TGTGTAGCACTCATTTTAAGGTGT 58.627 37.500 0.90 0.00 35.11 4.16
3783 3880 5.825679 TGTGTAGCACTCATTTTAAGGTGTT 59.174 36.000 0.90 0.00 35.11 3.32
3784 3881 6.320164 TGTGTAGCACTCATTTTAAGGTGTTT 59.680 34.615 0.90 0.00 35.11 2.83
3785 3882 6.856426 GTGTAGCACTCATTTTAAGGTGTTTC 59.144 38.462 0.00 0.00 32.90 2.78
3786 3883 5.108385 AGCACTCATTTTAAGGTGTTTCG 57.892 39.130 0.00 0.00 32.90 3.46
3787 3884 4.578928 AGCACTCATTTTAAGGTGTTTCGT 59.421 37.500 0.00 0.00 32.90 3.85
3788 3885 4.909880 GCACTCATTTTAAGGTGTTTCGTC 59.090 41.667 0.00 0.00 32.90 4.20
3789 3886 5.449304 CACTCATTTTAAGGTGTTTCGTCC 58.551 41.667 0.00 0.00 0.00 4.79
3790 3887 5.238650 CACTCATTTTAAGGTGTTTCGTCCT 59.761 40.000 0.00 0.00 35.34 3.85
3791 3888 5.238650 ACTCATTTTAAGGTGTTTCGTCCTG 59.761 40.000 0.00 0.00 33.97 3.86
3792 3889 5.369833 TCATTTTAAGGTGTTTCGTCCTGA 58.630 37.500 0.00 0.00 33.97 3.86
3793 3890 5.823570 TCATTTTAAGGTGTTTCGTCCTGAA 59.176 36.000 0.00 0.00 33.97 3.02
3794 3891 6.319152 TCATTTTAAGGTGTTTCGTCCTGAAA 59.681 34.615 0.00 0.00 44.19 2.69
3797 3894 8.201464 ATTTTAAGGTGTTTCGTCCTGAAAATT 58.799 29.630 11.38 0.93 45.37 1.82
3805 3902 6.438259 TTTCGTCCTGAAAATTTACACACA 57.562 33.333 0.00 0.00 43.46 3.72
3806 3903 5.412526 TCGTCCTGAAAATTTACACACAC 57.587 39.130 0.00 0.00 0.00 3.82
3807 3904 4.876679 TCGTCCTGAAAATTTACACACACA 59.123 37.500 0.00 0.00 0.00 3.72
3808 3905 5.529430 TCGTCCTGAAAATTTACACACACAT 59.471 36.000 0.00 0.00 0.00 3.21
3809 3906 5.624900 CGTCCTGAAAATTTACACACACATG 59.375 40.000 0.00 0.00 0.00 3.21
3810 3907 5.402270 GTCCTGAAAATTTACACACACATGC 59.598 40.000 0.00 0.00 0.00 4.06
3811 3908 5.301551 TCCTGAAAATTTACACACACATGCT 59.698 36.000 0.00 0.00 0.00 3.79
3812 3909 5.984926 CCTGAAAATTTACACACACATGCTT 59.015 36.000 0.00 0.00 0.00 3.91
3813 3910 6.479660 CCTGAAAATTTACACACACATGCTTT 59.520 34.615 0.00 0.00 0.00 3.51
3814 3911 7.651304 CCTGAAAATTTACACACACATGCTTTA 59.349 33.333 0.00 0.00 0.00 1.85
3815 3912 9.195411 CTGAAAATTTACACACACATGCTTTAT 57.805 29.630 0.00 0.00 0.00 1.40
3816 3913 8.976471 TGAAAATTTACACACACATGCTTTATG 58.024 29.630 0.00 0.00 42.68 1.90
3831 3928 8.654230 CATGCTTTATGTCTCTAAGTATGTGT 57.346 34.615 0.00 0.00 37.28 3.72
3832 3929 8.546244 CATGCTTTATGTCTCTAAGTATGTGTG 58.454 37.037 0.00 0.00 37.28 3.82
3833 3930 7.611770 TGCTTTATGTCTCTAAGTATGTGTGT 58.388 34.615 0.00 0.00 0.00 3.72
3834 3931 8.745590 TGCTTTATGTCTCTAAGTATGTGTGTA 58.254 33.333 0.00 0.00 0.00 2.90
3835 3932 9.751542 GCTTTATGTCTCTAAGTATGTGTGTAT 57.248 33.333 0.00 0.00 0.00 2.29
3879 3976 9.913451 TGAAACGTGAAAATTTGAATTTTGATC 57.087 25.926 16.64 5.98 45.70 2.92
3880 3977 9.913451 GAAACGTGAAAATTTGAATTTTGATCA 57.087 25.926 16.64 8.09 45.70 2.92
3882 3979 9.919348 AACGTGAAAATTTGAATTTTGATCAAG 57.081 25.926 16.64 13.24 45.70 3.02
3883 3980 9.097257 ACGTGAAAATTTGAATTTTGATCAAGT 57.903 25.926 16.64 13.72 45.70 3.16
3884 3981 9.571804 CGTGAAAATTTGAATTTTGATCAAGTC 57.428 29.630 16.64 8.32 45.70 3.01
3896 3993 4.687901 TGATCAAGTCAAACTGGTCTGA 57.312 40.909 0.00 0.00 32.78 3.27
3897 3994 5.233083 TGATCAAGTCAAACTGGTCTGAT 57.767 39.130 0.00 0.00 32.78 2.90
3898 3995 5.624159 TGATCAAGTCAAACTGGTCTGATT 58.376 37.500 0.00 0.00 32.78 2.57
3899 3996 6.064060 TGATCAAGTCAAACTGGTCTGATTT 58.936 36.000 0.00 0.00 32.78 2.17
3900 3997 5.756195 TCAAGTCAAACTGGTCTGATTTG 57.244 39.130 6.12 6.12 39.39 2.32
3901 3998 4.580167 TCAAGTCAAACTGGTCTGATTTGG 59.420 41.667 10.73 0.00 38.87 3.28
3902 3999 4.437682 AGTCAAACTGGTCTGATTTGGA 57.562 40.909 2.64 0.00 34.70 3.53
3903 4000 4.137543 AGTCAAACTGGTCTGATTTGGAC 58.862 43.478 2.64 0.00 34.70 4.02
3904 4001 3.882888 GTCAAACTGGTCTGATTTGGACA 59.117 43.478 2.64 0.00 34.70 4.02
3905 4002 4.520492 GTCAAACTGGTCTGATTTGGACAT 59.480 41.667 2.64 0.00 34.70 3.06
3918 4015 6.690530 TGATTTGGACATTTCTGATTGGTTC 58.309 36.000 0.00 0.00 0.00 3.62
3921 4018 4.081406 TGGACATTTCTGATTGGTTCCTG 58.919 43.478 0.00 0.00 0.00 3.86
3926 4023 4.640771 TTTCTGATTGGTTCCTGCTACT 57.359 40.909 0.00 0.00 0.00 2.57
4053 4150 2.627217 GCCTCTCTTCTTCCCTCCCTTA 60.627 54.545 0.00 0.00 0.00 2.69
4054 4151 3.725634 CCTCTCTTCTTCCCTCCCTTAA 58.274 50.000 0.00 0.00 0.00 1.85
4055 4152 4.104831 CCTCTCTTCTTCCCTCCCTTAAA 58.895 47.826 0.00 0.00 0.00 1.52
4062 4159 3.075283 TCTTCCCTCCCTTAAATGTTGCA 59.925 43.478 0.00 0.00 0.00 4.08
4063 4160 3.756082 TCCCTCCCTTAAATGTTGCAT 57.244 42.857 0.00 0.00 0.00 3.96
4064 4161 3.364549 TCCCTCCCTTAAATGTTGCATG 58.635 45.455 0.00 0.00 0.00 4.06
4079 4176 2.121948 TGCATGCTCCCTCTCTTACAT 58.878 47.619 20.33 0.00 0.00 2.29
4085 4182 2.703007 GCTCCCTCTCTTACATGGTCAT 59.297 50.000 0.00 0.00 0.00 3.06
4105 4202 5.231147 GTCATTAGCTAAGAAACAGCTCGAG 59.769 44.000 12.54 8.45 46.37 4.04
4228 4326 3.112709 GTCGTCAAGGCGCTGTCC 61.113 66.667 7.64 0.00 0.00 4.02
4289 4387 3.128349 GCTCCTAACACAACGACTTCAA 58.872 45.455 0.00 0.00 0.00 2.69
4291 4389 4.552184 GCTCCTAACACAACGACTTCAAAC 60.552 45.833 0.00 0.00 0.00 2.93
4307 4405 3.537206 AACGCCTGACCTGTCCAGC 62.537 63.158 0.00 0.00 0.00 4.85
4396 4508 2.401583 TACCGAGAGTACCGTTGCTA 57.598 50.000 0.00 0.00 0.00 3.49
4450 4562 1.201414 TGATGTGCTCTTGCTGCATTG 59.799 47.619 1.84 0.00 42.69 2.82
4464 4576 1.594194 GCATTGGTTGGCGATCACCA 61.594 55.000 0.00 0.00 38.16 4.17
4474 4586 3.664107 TGGCGATCACCATAATAAGCTC 58.336 45.455 0.00 0.00 33.75 4.09
4491 4605 3.567397 AGCTCTGTTCTGGGTCGTATAT 58.433 45.455 0.00 0.00 0.00 0.86
4492 4606 4.726583 AGCTCTGTTCTGGGTCGTATATA 58.273 43.478 0.00 0.00 0.00 0.86
4501 4615 6.451064 TCTGGGTCGTATATATATGCTGTG 57.549 41.667 5.44 0.00 0.00 3.66
4504 4618 5.949952 TGGGTCGTATATATATGCTGTGACT 59.050 40.000 5.44 0.00 0.00 3.41
4535 4651 1.154197 GAAGGTTGTAGTTGGTCCGC 58.846 55.000 0.00 0.00 0.00 5.54
4623 4739 3.118920 TGAACTCGAAGTTGGTGTGAGAA 60.119 43.478 5.20 0.00 38.80 2.87
4629 4745 3.490933 CGAAGTTGGTGTGAGAAGTGAGA 60.491 47.826 0.00 0.00 0.00 3.27
4740 4863 2.159379 GGTAGGCAATTTTCCGCAGAAG 60.159 50.000 0.00 0.00 32.35 2.85
4812 4935 3.434319 CCGTGCACCTGTGATGCC 61.434 66.667 12.15 0.00 42.69 4.40
4879 5005 6.183359 CGTAAATTGAATTTGGCAGCTTGTAC 60.183 38.462 13.08 0.00 33.82 2.90
4881 5007 3.921119 TGAATTTGGCAGCTTGTACTG 57.079 42.857 0.00 0.00 40.80 2.74
4882 5008 3.221771 TGAATTTGGCAGCTTGTACTGT 58.778 40.909 0.00 0.00 39.96 3.55
4884 5010 3.648339 ATTTGGCAGCTTGTACTGTTG 57.352 42.857 0.00 0.00 39.96 3.33
4885 5011 1.317613 TTGGCAGCTTGTACTGTTGG 58.682 50.000 0.00 0.00 39.96 3.77
4910 5415 5.025986 TCGCCAAAATAAGAAGTTCGTTC 57.974 39.130 0.00 0.00 35.08 3.95
4918 5423 2.795175 AGAAGTTCGTTCTTCGCAGA 57.205 45.000 13.33 0.00 43.54 4.26
4919 5424 3.093717 AGAAGTTCGTTCTTCGCAGAA 57.906 42.857 13.33 0.00 43.54 3.02
4920 5425 3.454375 AGAAGTTCGTTCTTCGCAGAAA 58.546 40.909 0.00 0.00 43.54 2.52
4921 5426 3.869246 AGAAGTTCGTTCTTCGCAGAAAA 59.131 39.130 0.00 0.00 43.54 2.29
4922 5427 4.331717 AGAAGTTCGTTCTTCGCAGAAAAA 59.668 37.500 0.00 0.00 43.54 1.94
4946 5451 1.214367 TCGTTTGGAGTTCGAACTGC 58.786 50.000 34.76 34.76 46.18 4.40
4969 5474 1.555533 GCCTACTGCCTACTTTGGTCT 59.444 52.381 0.00 0.00 0.00 3.85
4980 5485 2.406452 CTTTGGTCTGGTTGCCACGC 62.406 60.000 0.00 0.00 34.02 5.34
4999 5504 3.022287 GTGAACACCACACCGCTG 58.978 61.111 0.00 0.00 45.03 5.18
5023 5543 4.473520 CCGAGCCAACCTGCCGAT 62.474 66.667 0.00 0.00 0.00 4.18
5024 5544 2.892425 CGAGCCAACCTGCCGATC 60.892 66.667 0.00 0.00 0.00 3.69
5025 5545 2.514824 GAGCCAACCTGCCGATCC 60.515 66.667 0.00 0.00 0.00 3.36
5026 5546 4.473520 AGCCAACCTGCCGATCCG 62.474 66.667 0.00 0.00 0.00 4.18
5106 5628 1.846439 CCTCTCTCTCTCTCTCCCACT 59.154 57.143 0.00 0.00 0.00 4.00
5165 5704 1.750780 AGCGGCGAGATGAGAGTCA 60.751 57.895 12.98 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 44 1.506718 CATGACAAGCAGCAGCAGG 59.493 57.895 3.17 0.00 45.49 4.85
82 89 2.383527 GGCACCAAAGCGACGAGAG 61.384 63.158 0.00 0.00 34.64 3.20
112 119 1.891616 GACGAGACCTCCCTGAACC 59.108 63.158 0.00 0.00 0.00 3.62
113 120 1.242665 ACGACGAGACCTCCCTGAAC 61.243 60.000 0.00 0.00 0.00 3.18
114 121 0.959372 GACGACGAGACCTCCCTGAA 60.959 60.000 0.00 0.00 0.00 3.02
116 123 1.370587 GAGACGACGAGACCTCCCTG 61.371 65.000 0.00 0.00 0.00 4.45
117 124 1.078285 GAGACGACGAGACCTCCCT 60.078 63.158 0.00 0.00 0.00 4.20
119 126 0.959372 TTGGAGACGACGAGACCTCC 60.959 60.000 17.01 17.01 40.71 4.30
121 128 1.546961 AATTGGAGACGACGAGACCT 58.453 50.000 0.00 0.00 0.00 3.85
122 129 2.260481 GAAATTGGAGACGACGAGACC 58.740 52.381 0.00 1.87 0.00 3.85
123 130 2.260481 GGAAATTGGAGACGACGAGAC 58.740 52.381 0.00 0.00 0.00 3.36
124 131 1.135489 CGGAAATTGGAGACGACGAGA 60.135 52.381 0.00 0.00 0.00 4.04
125 132 1.269166 CGGAAATTGGAGACGACGAG 58.731 55.000 0.00 0.00 0.00 4.18
127 134 0.736325 AGCGGAAATTGGAGACGACG 60.736 55.000 0.00 0.00 0.00 5.12
128 135 1.439679 AAGCGGAAATTGGAGACGAC 58.560 50.000 0.00 0.00 0.00 4.34
130 137 1.804151 TGAAAGCGGAAATTGGAGACG 59.196 47.619 0.00 0.00 0.00 4.18
131 138 2.814336 ACTGAAAGCGGAAATTGGAGAC 59.186 45.455 0.00 0.00 37.60 3.36
132 139 3.140325 ACTGAAAGCGGAAATTGGAGA 57.860 42.857 0.00 0.00 37.60 3.71
133 140 3.253188 TGAACTGAAAGCGGAAATTGGAG 59.747 43.478 0.00 0.00 37.60 3.86
134 141 3.218453 TGAACTGAAAGCGGAAATTGGA 58.782 40.909 0.00 0.00 37.60 3.53
135 142 3.253188 TCTGAACTGAAAGCGGAAATTGG 59.747 43.478 0.00 0.00 37.60 3.16
136 143 4.023707 AGTCTGAACTGAAAGCGGAAATTG 60.024 41.667 0.00 0.00 37.60 2.32
137 144 4.137543 AGTCTGAACTGAAAGCGGAAATT 58.862 39.130 0.00 0.00 37.60 1.82
138 145 3.744660 AGTCTGAACTGAAAGCGGAAAT 58.255 40.909 0.00 0.00 37.60 2.17
139 146 3.194005 AGTCTGAACTGAAAGCGGAAA 57.806 42.857 0.00 0.00 37.60 3.13
140 147 2.910688 AGTCTGAACTGAAAGCGGAA 57.089 45.000 0.00 0.00 37.60 4.30
141 148 2.548067 GGAAGTCTGAACTGAAAGCGGA 60.548 50.000 0.00 0.00 37.60 5.54
164 171 8.043710 AGAACCTCAATTACTACAATCCAAGAG 58.956 37.037 0.00 0.00 0.00 2.85
189 201 1.741706 GATGATGAACCAGTGGTGCAG 59.258 52.381 27.18 0.00 45.54 4.41
218 234 3.560481 TGCGTTGTCATTTCGGTTTCTAA 59.440 39.130 0.00 0.00 0.00 2.10
255 271 3.316308 CCTTATGCTGATGGCCAAACTAC 59.684 47.826 10.96 0.00 40.92 2.73
297 313 3.813166 CGTGGTATTTCTGTTGGACTGTT 59.187 43.478 0.00 0.00 0.00 3.16
298 314 3.070446 TCGTGGTATTTCTGTTGGACTGT 59.930 43.478 0.00 0.00 0.00 3.55
299 315 3.659786 TCGTGGTATTTCTGTTGGACTG 58.340 45.455 0.00 0.00 0.00 3.51
300 316 3.576982 TCTCGTGGTATTTCTGTTGGACT 59.423 43.478 0.00 0.00 0.00 3.85
301 317 3.921677 TCTCGTGGTATTTCTGTTGGAC 58.078 45.455 0.00 0.00 0.00 4.02
302 318 4.819105 ATCTCGTGGTATTTCTGTTGGA 57.181 40.909 0.00 0.00 0.00 3.53
303 319 4.437390 GCAATCTCGTGGTATTTCTGTTGG 60.437 45.833 0.00 0.00 0.00 3.77
304 320 4.437390 GGCAATCTCGTGGTATTTCTGTTG 60.437 45.833 0.00 0.00 0.00 3.33
315 331 1.377725 AGGCAAGGCAATCTCGTGG 60.378 57.895 0.00 0.00 0.00 4.94
337 353 0.741221 GCCAAGCTTAGACAGACCGG 60.741 60.000 0.00 0.00 0.00 5.28
349 367 0.826672 AAAGCAGAGCAAGCCAAGCT 60.827 50.000 0.00 0.00 46.82 3.74
352 370 1.067516 GAACAAAGCAGAGCAAGCCAA 59.932 47.619 0.00 0.00 0.00 4.52
379 397 1.270550 CTTGATGGCACCAAGTTGGAC 59.729 52.381 28.80 18.40 40.96 4.02
387 405 1.207488 AGGGTAGCTTGATGGCACCA 61.207 55.000 0.00 0.00 36.14 4.17
397 415 2.613223 GCGAAGAGAAACAGGGTAGCTT 60.613 50.000 0.00 0.00 0.00 3.74
398 416 1.066787 GCGAAGAGAAACAGGGTAGCT 60.067 52.381 0.00 0.00 0.00 3.32
506 524 9.010366 GTTGTCATTTTCAGTTTCAGTTTCTAC 57.990 33.333 0.00 0.00 0.00 2.59
540 559 2.631428 CCAAACCACGAGTGCACG 59.369 61.111 12.01 2.67 39.31 5.34
549 568 0.737019 CATGCCGATTGCCAAACCAC 60.737 55.000 0.00 0.00 40.16 4.16
559 578 1.753930 TGTGCAATCTCATGCCGATT 58.246 45.000 0.00 4.76 45.83 3.34
662 681 2.725723 GGTTTTCGATACGAACACGTGA 59.274 45.455 25.01 0.00 45.64 4.35
682 701 0.313987 GCCTTTGGTTCTTTCCACGG 59.686 55.000 0.00 0.00 37.20 4.94
750 770 0.034670 AATGGAGAAGAGGCTGGCAC 60.035 55.000 3.38 0.00 0.00 5.01
754 774 1.283029 TGGGAAATGGAGAAGAGGCTG 59.717 52.381 0.00 0.00 0.00 4.85
756 776 1.283321 ACTGGGAAATGGAGAAGAGGC 59.717 52.381 0.00 0.00 0.00 4.70
791 811 5.954150 AGGCAATTCATGATAGGTCAAAGTT 59.046 36.000 0.00 0.00 38.01 2.66
792 812 5.513233 AGGCAATTCATGATAGGTCAAAGT 58.487 37.500 0.00 0.00 38.01 2.66
855 875 3.276857 ACACTCATAGCCAGCATGAAAG 58.723 45.455 0.00 0.00 39.69 2.62
941 961 4.998051 TGCCTCTGGTTCCTAAGAAAAAT 58.002 39.130 0.00 0.00 32.58 1.82
949 969 3.973472 TCTATCTGCCTCTGGTTCCTA 57.027 47.619 0.00 0.00 0.00 2.94
1145 1165 6.826231 TCGAACATAGGCCTCAAATCAATAAA 59.174 34.615 9.68 0.00 0.00 1.40
1296 1316 5.987098 AGCACATCCTGATATCATGGATAC 58.013 41.667 24.42 19.18 38.41 2.24
1393 1413 1.487976 ACATGCTGGGTGGAGATACTG 59.512 52.381 0.00 0.00 0.00 2.74
1439 1459 2.485426 TGCTCATGCTAACTTGTTCTGC 59.515 45.455 0.00 0.00 40.48 4.26
1475 1495 5.702209 TCCCTCACTTGTAACGTTAAAATCC 59.298 40.000 11.28 0.00 0.00 3.01
1551 1571 4.328440 GTGTTGACAGATGACTATGCTGAC 59.672 45.833 0.00 0.00 33.94 3.51
1565 1585 5.639506 AGATAATCTGAAACGGTGTTGACAG 59.360 40.000 9.37 9.37 0.00 3.51
1735 1759 7.870954 TGTTAACCATGTGTTTTACAAACAACA 59.129 29.630 2.48 5.63 43.77 3.33
1797 1821 0.039618 TTTCAATGGGAGGAGGTGCC 59.960 55.000 0.00 0.00 37.11 5.01
2745 2814 7.662258 TCAAAAACGTTCTTATATTCTGGGACA 59.338 33.333 0.00 0.00 0.00 4.02
2746 2815 7.961283 GTCAAAAACGTTCTTATATTCTGGGAC 59.039 37.037 0.00 0.00 0.00 4.46
2747 2816 7.662258 TGTCAAAAACGTTCTTATATTCTGGGA 59.338 33.333 0.00 0.00 0.00 4.37
2748 2817 7.749126 GTGTCAAAAACGTTCTTATATTCTGGG 59.251 37.037 0.00 0.00 0.00 4.45
2749 2818 8.504005 AGTGTCAAAAACGTTCTTATATTCTGG 58.496 33.333 0.00 0.00 0.00 3.86
2753 2822 9.769093 GCATAGTGTCAAAAACGTTCTTATATT 57.231 29.630 0.00 0.00 0.00 1.28
2754 2823 9.162764 AGCATAGTGTCAAAAACGTTCTTATAT 57.837 29.630 0.00 0.00 0.00 0.86
2755 2824 8.542497 AGCATAGTGTCAAAAACGTTCTTATA 57.458 30.769 0.00 0.00 0.00 0.98
2756 2825 7.435068 AGCATAGTGTCAAAAACGTTCTTAT 57.565 32.000 0.00 0.00 0.00 1.73
2757 2826 6.854496 AGCATAGTGTCAAAAACGTTCTTA 57.146 33.333 0.00 0.00 0.00 2.10
2758 2827 5.751243 AGCATAGTGTCAAAAACGTTCTT 57.249 34.783 0.00 0.00 0.00 2.52
2759 2828 6.854496 TTAGCATAGTGTCAAAAACGTTCT 57.146 33.333 0.00 0.00 0.00 3.01
2760 2829 7.075741 ACATTAGCATAGTGTCAAAAACGTTC 58.924 34.615 0.00 0.00 36.80 3.95
2761 2830 6.966021 ACATTAGCATAGTGTCAAAAACGTT 58.034 32.000 0.00 0.00 36.80 3.99
2762 2831 6.554334 ACATTAGCATAGTGTCAAAAACGT 57.446 33.333 0.00 0.00 36.80 3.99
2763 2832 8.942669 TTAACATTAGCATAGTGTCAAAAACG 57.057 30.769 0.00 0.00 40.91 3.60
2789 2858 8.927411 CCTCCATCCCAAAATATAAGAACATTT 58.073 33.333 0.00 0.00 0.00 2.32
2790 2859 7.510343 CCCTCCATCCCAAAATATAAGAACATT 59.490 37.037 0.00 0.00 0.00 2.71
2791 2860 7.012607 CCCTCCATCCCAAAATATAAGAACAT 58.987 38.462 0.00 0.00 0.00 2.71
2792 2861 6.161348 TCCCTCCATCCCAAAATATAAGAACA 59.839 38.462 0.00 0.00 0.00 3.18
2793 2862 6.610830 TCCCTCCATCCCAAAATATAAGAAC 58.389 40.000 0.00 0.00 0.00 3.01
2794 2863 6.392842 ACTCCCTCCATCCCAAAATATAAGAA 59.607 38.462 0.00 0.00 0.00 2.52
2795 2864 5.917087 ACTCCCTCCATCCCAAAATATAAGA 59.083 40.000 0.00 0.00 0.00 2.10
2796 2865 6.206180 ACTCCCTCCATCCCAAAATATAAG 57.794 41.667 0.00 0.00 0.00 1.73
2797 2866 6.045106 GGTACTCCCTCCATCCCAAAATATAA 59.955 42.308 0.00 0.00 0.00 0.98
2798 2867 5.550403 GGTACTCCCTCCATCCCAAAATATA 59.450 44.000 0.00 0.00 0.00 0.86
2799 2868 4.354087 GGTACTCCCTCCATCCCAAAATAT 59.646 45.833 0.00 0.00 0.00 1.28
2800 2869 3.720002 GGTACTCCCTCCATCCCAAAATA 59.280 47.826 0.00 0.00 0.00 1.40
2801 2870 2.514160 GGTACTCCCTCCATCCCAAAAT 59.486 50.000 0.00 0.00 0.00 1.82
2802 2871 1.920351 GGTACTCCCTCCATCCCAAAA 59.080 52.381 0.00 0.00 0.00 2.44
2803 2872 1.082194 AGGTACTCCCTCCATCCCAAA 59.918 52.381 0.00 0.00 40.71 3.28
2804 2873 0.722676 AGGTACTCCCTCCATCCCAA 59.277 55.000 0.00 0.00 40.71 4.12
2805 2874 0.031111 CAGGTACTCCCTCCATCCCA 60.031 60.000 0.00 0.00 43.86 4.37
2806 2875 0.031010 ACAGGTACTCCCTCCATCCC 60.031 60.000 0.00 0.00 43.86 3.85
2807 2876 1.880941 AACAGGTACTCCCTCCATCC 58.119 55.000 0.00 0.00 43.86 3.51
2808 2877 5.454897 GGAATAAACAGGTACTCCCTCCATC 60.455 48.000 0.00 0.00 43.86 3.51
2809 2878 4.412528 GGAATAAACAGGTACTCCCTCCAT 59.587 45.833 0.00 0.00 43.86 3.41
2810 2879 3.778629 GGAATAAACAGGTACTCCCTCCA 59.221 47.826 0.00 0.00 43.86 3.86
2811 2880 3.778629 TGGAATAAACAGGTACTCCCTCC 59.221 47.826 0.00 0.00 43.86 4.30
2812 2881 5.632034 ATGGAATAAACAGGTACTCCCTC 57.368 43.478 0.00 0.00 43.86 4.30
2814 2883 8.630037 CATAAAATGGAATAAACAGGTACTCCC 58.370 37.037 0.00 0.00 34.60 4.30
2815 2884 9.185680 ACATAAAATGGAATAAACAGGTACTCC 57.814 33.333 0.00 0.00 31.40 3.85
2837 2906 6.702449 ATCCTATCATTGGTGCCTAACATA 57.298 37.500 0.00 0.00 0.00 2.29
3267 3364 2.866156 GCTAACGCATGCTCTCATTGTA 59.134 45.455 17.13 0.00 35.78 2.41
3283 3380 3.053831 TGCCCTACTCTTGTTGCTAAC 57.946 47.619 0.00 0.00 0.00 2.34
3341 3438 8.534496 ACATGATATTGCACTATAGTATGAGCA 58.466 33.333 4.74 8.26 0.00 4.26
3342 3439 8.939201 ACATGATATTGCACTATAGTATGAGC 57.061 34.615 4.74 5.53 0.00 4.26
3354 3451 8.344831 TCTATGCTTGTTTACATGATATTGCAC 58.655 33.333 0.00 0.00 0.00 4.57
3405 3502 7.470702 CGGAGGACATAGATCAAGAACAGTAAT 60.471 40.741 0.00 0.00 0.00 1.89
3493 3590 9.436957 TCCAATCAGACAACTTAGAATAGTTTC 57.563 33.333 0.00 0.00 36.24 2.78
3496 3593 8.140112 ACTCCAATCAGACAACTTAGAATAGT 57.860 34.615 0.00 0.00 0.00 2.12
3497 3594 9.743057 CTACTCCAATCAGACAACTTAGAATAG 57.257 37.037 0.00 0.00 0.00 1.73
3498 3595 8.696374 CCTACTCCAATCAGACAACTTAGAATA 58.304 37.037 0.00 0.00 0.00 1.75
3499 3596 7.365117 CCCTACTCCAATCAGACAACTTAGAAT 60.365 40.741 0.00 0.00 0.00 2.40
3501 3598 5.422331 CCCTACTCCAATCAGACAACTTAGA 59.578 44.000 0.00 0.00 0.00 2.10
3502 3599 5.665459 CCCTACTCCAATCAGACAACTTAG 58.335 45.833 0.00 0.00 0.00 2.18
3503 3600 4.081087 GCCCTACTCCAATCAGACAACTTA 60.081 45.833 0.00 0.00 0.00 2.24
3517 3614 1.025113 GCTCCAAAACGCCCTACTCC 61.025 60.000 0.00 0.00 0.00 3.85
3519 3616 0.036294 GAGCTCCAAAACGCCCTACT 60.036 55.000 0.87 0.00 0.00 2.57
3520 3617 1.359459 CGAGCTCCAAAACGCCCTAC 61.359 60.000 8.47 0.00 0.00 3.18
3523 3620 3.431725 CCGAGCTCCAAAACGCCC 61.432 66.667 8.47 0.00 0.00 6.13
3524 3621 4.103103 GCCGAGCTCCAAAACGCC 62.103 66.667 8.47 0.00 0.00 5.68
3525 3622 4.103103 GGCCGAGCTCCAAAACGC 62.103 66.667 8.47 0.23 0.00 4.84
3526 3623 2.358737 AGGCCGAGCTCCAAAACG 60.359 61.111 8.47 0.00 0.00 3.60
3527 3624 2.041115 GGAGGCCGAGCTCCAAAAC 61.041 63.158 8.47 0.00 39.45 2.43
3528 3625 2.351276 GGAGGCCGAGCTCCAAAA 59.649 61.111 8.47 0.00 39.45 2.44
3529 3626 2.927856 TGGAGGCCGAGCTCCAAA 60.928 61.111 8.96 0.00 45.68 3.28
3532 3629 4.247380 CCATGGAGGCCGAGCTCC 62.247 72.222 5.56 0.00 40.05 4.70
3533 3630 3.157252 TCCATGGAGGCCGAGCTC 61.157 66.667 11.44 2.73 37.29 4.09
3534 3631 3.160047 CTCCATGGAGGCCGAGCT 61.160 66.667 31.14 0.00 38.51 4.09
3542 3639 0.106519 AAAATCCGGCCTCCATGGAG 60.107 55.000 31.69 31.69 41.63 3.86
3543 3640 0.334676 AAAAATCCGGCCTCCATGGA 59.665 50.000 15.27 15.27 38.35 3.41
3544 3641 2.900547 AAAAATCCGGCCTCCATGG 58.099 52.632 4.97 4.97 39.35 3.66
3563 3660 9.778993 TGAAAAATGCGAATTTTGAAATTTTCA 57.221 22.222 14.89 13.39 38.64 2.69
3569 3666 9.778993 TGAAATTGAAAAATGCGAATTTTGAAA 57.221 22.222 14.89 12.15 34.34 2.69
3570 3667 9.778993 TTGAAATTGAAAAATGCGAATTTTGAA 57.221 22.222 14.89 10.99 34.34 2.69
3571 3668 9.778993 TTTGAAATTGAAAAATGCGAATTTTGA 57.221 22.222 14.89 5.14 34.34 2.69
3608 3705 9.423061 GCATCCTTGTTTACTTGTATGATTTTT 57.577 29.630 0.00 0.00 0.00 1.94
3609 3706 8.806146 AGCATCCTTGTTTACTTGTATGATTTT 58.194 29.630 0.00 0.00 0.00 1.82
3610 3707 8.353423 AGCATCCTTGTTTACTTGTATGATTT 57.647 30.769 0.00 0.00 0.00 2.17
3611 3708 7.944729 AGCATCCTTGTTTACTTGTATGATT 57.055 32.000 0.00 0.00 0.00 2.57
3612 3709 9.060347 CATAGCATCCTTGTTTACTTGTATGAT 57.940 33.333 0.00 0.00 0.00 2.45
3613 3710 8.046708 ACATAGCATCCTTGTTTACTTGTATGA 58.953 33.333 0.00 0.00 0.00 2.15
3614 3711 8.124823 CACATAGCATCCTTGTTTACTTGTATG 58.875 37.037 0.00 0.00 0.00 2.39
3615 3712 7.829211 ACACATAGCATCCTTGTTTACTTGTAT 59.171 33.333 0.00 0.00 0.00 2.29
3616 3713 7.165485 ACACATAGCATCCTTGTTTACTTGTA 58.835 34.615 0.00 0.00 0.00 2.41
3617 3714 6.003950 ACACATAGCATCCTTGTTTACTTGT 58.996 36.000 0.00 0.00 0.00 3.16
3618 3715 6.500684 ACACATAGCATCCTTGTTTACTTG 57.499 37.500 0.00 0.00 0.00 3.16
3619 3716 7.883311 ACTTACACATAGCATCCTTGTTTACTT 59.117 33.333 0.00 0.00 0.00 2.24
3620 3717 7.394816 ACTTACACATAGCATCCTTGTTTACT 58.605 34.615 0.00 0.00 0.00 2.24
3621 3718 7.611213 ACTTACACATAGCATCCTTGTTTAC 57.389 36.000 0.00 0.00 0.00 2.01
3622 3719 9.325198 CATACTTACACATAGCATCCTTGTTTA 57.675 33.333 0.00 0.00 0.00 2.01
3623 3720 7.829211 ACATACTTACACATAGCATCCTTGTTT 59.171 33.333 0.00 0.00 0.00 2.83
3624 3721 7.338710 ACATACTTACACATAGCATCCTTGTT 58.661 34.615 0.00 0.00 0.00 2.83
3625 3722 6.889198 ACATACTTACACATAGCATCCTTGT 58.111 36.000 0.00 0.00 0.00 3.16
3626 3723 8.887036 TTACATACTTACACATAGCATCCTTG 57.113 34.615 0.00 0.00 0.00 3.61
3627 3724 9.899661 TTTTACATACTTACACATAGCATCCTT 57.100 29.630 0.00 0.00 0.00 3.36
3646 3743 9.492730 AGGGTATTTCATCCTCAAATTTTACAT 57.507 29.630 0.00 0.00 0.00 2.29
3647 3744 8.893563 AGGGTATTTCATCCTCAAATTTTACA 57.106 30.769 0.00 0.00 0.00 2.41
3653 3750 8.424133 GCATTTTAGGGTATTTCATCCTCAAAT 58.576 33.333 0.00 0.00 35.86 2.32
3654 3751 7.416213 CGCATTTTAGGGTATTTCATCCTCAAA 60.416 37.037 0.00 0.00 31.11 2.69
3655 3752 6.039270 CGCATTTTAGGGTATTTCATCCTCAA 59.961 38.462 0.00 0.00 32.46 3.02
3656 3753 5.530915 CGCATTTTAGGGTATTTCATCCTCA 59.469 40.000 0.00 0.00 32.46 3.86
3657 3754 5.763204 TCGCATTTTAGGGTATTTCATCCTC 59.237 40.000 0.00 0.00 32.46 3.71
3658 3755 5.690865 TCGCATTTTAGGGTATTTCATCCT 58.309 37.500 0.00 0.00 34.85 3.24
3659 3756 6.431234 AGATCGCATTTTAGGGTATTTCATCC 59.569 38.462 0.00 0.00 0.00 3.51
3660 3757 7.041098 ACAGATCGCATTTTAGGGTATTTCATC 60.041 37.037 0.00 0.00 0.00 2.92
3661 3758 6.772716 ACAGATCGCATTTTAGGGTATTTCAT 59.227 34.615 0.00 0.00 0.00 2.57
3662 3759 6.038161 CACAGATCGCATTTTAGGGTATTTCA 59.962 38.462 0.00 0.00 0.00 2.69
3663 3760 6.430451 CACAGATCGCATTTTAGGGTATTTC 58.570 40.000 0.00 0.00 0.00 2.17
3664 3761 5.221048 GCACAGATCGCATTTTAGGGTATTT 60.221 40.000 0.00 0.00 0.00 1.40
3665 3762 4.275936 GCACAGATCGCATTTTAGGGTATT 59.724 41.667 0.00 0.00 0.00 1.89
3666 3763 3.815401 GCACAGATCGCATTTTAGGGTAT 59.185 43.478 0.00 0.00 0.00 2.73
3667 3764 3.202906 GCACAGATCGCATTTTAGGGTA 58.797 45.455 0.00 0.00 0.00 3.69
3668 3765 2.017049 GCACAGATCGCATTTTAGGGT 58.983 47.619 0.00 0.00 0.00 4.34
3669 3766 2.016318 TGCACAGATCGCATTTTAGGG 58.984 47.619 0.00 0.00 33.55 3.53
3670 3767 3.763097 TTGCACAGATCGCATTTTAGG 57.237 42.857 0.00 0.00 39.58 2.69
3690 3787 7.712205 CCTCAAAGTCCATGAATTTGTCTTTTT 59.288 33.333 14.32 0.00 44.49 1.94
3691 3788 7.069826 TCCTCAAAGTCCATGAATTTGTCTTTT 59.930 33.333 14.32 0.00 44.49 2.27
3692 3789 6.550854 TCCTCAAAGTCCATGAATTTGTCTTT 59.449 34.615 14.32 3.09 44.49 2.52
3693 3790 6.070656 TCCTCAAAGTCCATGAATTTGTCTT 58.929 36.000 14.32 0.00 44.49 3.01
3694 3791 5.634118 TCCTCAAAGTCCATGAATTTGTCT 58.366 37.500 14.32 0.00 44.49 3.41
3695 3792 5.964958 TCCTCAAAGTCCATGAATTTGTC 57.035 39.130 14.32 0.00 44.49 3.18
3696 3793 6.012113 TCATCCTCAAAGTCCATGAATTTGT 58.988 36.000 14.32 0.00 44.49 2.83
3697 3794 6.519679 TCATCCTCAAAGTCCATGAATTTG 57.480 37.500 9.93 9.93 45.19 2.32
3698 3795 7.729124 ATTCATCCTCAAAGTCCATGAATTT 57.271 32.000 0.00 0.00 39.92 1.82
3699 3796 8.057623 ACTATTCATCCTCAAAGTCCATGAATT 58.942 33.333 9.96 0.00 39.92 2.17
3700 3797 7.501559 CACTATTCATCCTCAAAGTCCATGAAT 59.498 37.037 9.68 9.68 43.42 2.57
3701 3798 6.825213 CACTATTCATCCTCAAAGTCCATGAA 59.175 38.462 0.00 0.00 37.75 2.57
3702 3799 6.351711 CACTATTCATCCTCAAAGTCCATGA 58.648 40.000 0.00 0.00 0.00 3.07
3703 3800 5.008415 GCACTATTCATCCTCAAAGTCCATG 59.992 44.000 0.00 0.00 0.00 3.66
3704 3801 5.104193 AGCACTATTCATCCTCAAAGTCCAT 60.104 40.000 0.00 0.00 0.00 3.41
3705 3802 4.225942 AGCACTATTCATCCTCAAAGTCCA 59.774 41.667 0.00 0.00 0.00 4.02
3706 3803 4.775236 AGCACTATTCATCCTCAAAGTCC 58.225 43.478 0.00 0.00 0.00 3.85
3707 3804 4.813697 GGAGCACTATTCATCCTCAAAGTC 59.186 45.833 0.00 0.00 0.00 3.01
3708 3805 4.472833 AGGAGCACTATTCATCCTCAAAGT 59.527 41.667 0.00 0.00 37.66 2.66
3709 3806 5.033589 AGGAGCACTATTCATCCTCAAAG 57.966 43.478 0.00 0.00 37.66 2.77
3710 3807 5.663106 AGTAGGAGCACTATTCATCCTCAAA 59.337 40.000 0.00 0.00 41.30 2.69
3711 3808 5.211973 AGTAGGAGCACTATTCATCCTCAA 58.788 41.667 0.00 0.00 41.30 3.02
3712 3809 4.809193 AGTAGGAGCACTATTCATCCTCA 58.191 43.478 0.00 0.00 41.30 3.86
3713 3810 6.902771 TTAGTAGGAGCACTATTCATCCTC 57.097 41.667 0.00 0.00 41.30 3.71
3714 3811 7.676683 TTTTAGTAGGAGCACTATTCATCCT 57.323 36.000 0.00 0.00 44.37 3.24
3715 3812 7.041712 GCTTTTTAGTAGGAGCACTATTCATCC 60.042 40.741 0.00 0.00 35.29 3.51
3716 3813 7.041712 GGCTTTTTAGTAGGAGCACTATTCATC 60.042 40.741 0.00 0.00 36.87 2.92
3717 3814 6.768381 GGCTTTTTAGTAGGAGCACTATTCAT 59.232 38.462 0.00 0.00 36.87 2.57
3718 3815 6.070194 AGGCTTTTTAGTAGGAGCACTATTCA 60.070 38.462 0.00 0.00 36.87 2.57
3719 3816 6.350103 AGGCTTTTTAGTAGGAGCACTATTC 58.650 40.000 0.00 0.00 36.87 1.75
3720 3817 6.070194 TGAGGCTTTTTAGTAGGAGCACTATT 60.070 38.462 0.00 0.00 36.87 1.73
3721 3818 5.425539 TGAGGCTTTTTAGTAGGAGCACTAT 59.574 40.000 0.00 0.00 36.87 2.12
3722 3819 4.775780 TGAGGCTTTTTAGTAGGAGCACTA 59.224 41.667 0.00 0.00 36.87 2.74
3723 3820 3.583086 TGAGGCTTTTTAGTAGGAGCACT 59.417 43.478 0.00 0.00 36.87 4.40
3724 3821 3.935828 CTGAGGCTTTTTAGTAGGAGCAC 59.064 47.826 0.00 0.00 36.87 4.40
3725 3822 3.838317 TCTGAGGCTTTTTAGTAGGAGCA 59.162 43.478 0.00 0.00 36.87 4.26
3726 3823 4.473477 TCTGAGGCTTTTTAGTAGGAGC 57.527 45.455 0.00 0.00 0.00 4.70
3727 3824 6.881602 ACAAATCTGAGGCTTTTTAGTAGGAG 59.118 38.462 0.00 0.00 0.00 3.69
3728 3825 6.779860 ACAAATCTGAGGCTTTTTAGTAGGA 58.220 36.000 0.00 0.00 0.00 2.94
3729 3826 7.391833 AGAACAAATCTGAGGCTTTTTAGTAGG 59.608 37.037 0.00 0.00 36.88 3.18
3730 3827 8.329203 AGAACAAATCTGAGGCTTTTTAGTAG 57.671 34.615 0.00 0.00 36.88 2.57
3731 3828 8.691661 AAGAACAAATCTGAGGCTTTTTAGTA 57.308 30.769 0.00 0.00 38.79 1.82
3732 3829 7.588497 AAGAACAAATCTGAGGCTTTTTAGT 57.412 32.000 0.00 0.00 38.79 2.24
3733 3830 8.877808 AAAAGAACAAATCTGAGGCTTTTTAG 57.122 30.769 0.00 0.00 38.79 1.85
3734 3831 9.097257 CAAAAAGAACAAATCTGAGGCTTTTTA 57.903 29.630 0.00 0.00 37.87 1.52
3735 3832 7.607607 ACAAAAAGAACAAATCTGAGGCTTTTT 59.392 29.630 0.00 0.00 38.97 1.94
3736 3833 7.064966 CACAAAAAGAACAAATCTGAGGCTTTT 59.935 33.333 0.00 0.00 38.79 2.27
3737 3834 6.536224 CACAAAAAGAACAAATCTGAGGCTTT 59.464 34.615 0.00 0.00 38.79 3.51
3738 3835 6.044682 CACAAAAAGAACAAATCTGAGGCTT 58.955 36.000 0.00 0.00 38.79 4.35
3739 3836 5.127682 ACACAAAAAGAACAAATCTGAGGCT 59.872 36.000 0.00 0.00 38.79 4.58
3740 3837 5.351458 ACACAAAAAGAACAAATCTGAGGC 58.649 37.500 0.00 0.00 38.79 4.70
3741 3838 6.638468 GCTACACAAAAAGAACAAATCTGAGG 59.362 38.462 0.00 0.00 38.79 3.86
3742 3839 7.166473 GTGCTACACAAAAAGAACAAATCTGAG 59.834 37.037 0.00 0.00 34.71 3.35
3743 3840 6.972328 GTGCTACACAAAAAGAACAAATCTGA 59.028 34.615 0.00 0.00 34.71 3.27
3744 3841 6.974622 AGTGCTACACAAAAAGAACAAATCTG 59.025 34.615 0.00 0.00 36.13 2.90
3745 3842 7.100458 AGTGCTACACAAAAAGAACAAATCT 57.900 32.000 0.00 0.00 37.04 2.40
3746 3843 6.972328 TGAGTGCTACACAAAAAGAACAAATC 59.028 34.615 0.00 0.00 36.74 2.17
3747 3844 6.862209 TGAGTGCTACACAAAAAGAACAAAT 58.138 32.000 0.00 0.00 36.74 2.32
3748 3845 6.260870 TGAGTGCTACACAAAAAGAACAAA 57.739 33.333 0.00 0.00 36.74 2.83
3749 3846 5.888691 TGAGTGCTACACAAAAAGAACAA 57.111 34.783 0.00 0.00 36.74 2.83
3750 3847 6.449635 AATGAGTGCTACACAAAAAGAACA 57.550 33.333 0.00 0.00 36.74 3.18
3751 3848 7.755582 AAAATGAGTGCTACACAAAAAGAAC 57.244 32.000 0.00 0.00 36.74 3.01
3752 3849 9.515020 CTTAAAATGAGTGCTACACAAAAAGAA 57.485 29.630 0.00 0.00 36.74 2.52
3753 3850 8.134895 CCTTAAAATGAGTGCTACACAAAAAGA 58.865 33.333 0.00 0.00 36.74 2.52
3754 3851 7.920682 ACCTTAAAATGAGTGCTACACAAAAAG 59.079 33.333 0.00 0.00 36.74 2.27
3755 3852 7.704472 CACCTTAAAATGAGTGCTACACAAAAA 59.296 33.333 0.00 0.00 36.74 1.94
3756 3853 7.147983 ACACCTTAAAATGAGTGCTACACAAAA 60.148 33.333 0.00 0.00 36.74 2.44
3757 3854 6.320164 ACACCTTAAAATGAGTGCTACACAAA 59.680 34.615 0.00 0.00 36.74 2.83
3758 3855 5.825679 ACACCTTAAAATGAGTGCTACACAA 59.174 36.000 0.00 0.00 36.74 3.33
3759 3856 5.373222 ACACCTTAAAATGAGTGCTACACA 58.627 37.500 0.00 0.00 36.74 3.72
3760 3857 5.941948 ACACCTTAAAATGAGTGCTACAC 57.058 39.130 0.00 0.00 33.46 2.90
3761 3858 6.293190 CGAAACACCTTAAAATGAGTGCTACA 60.293 38.462 0.00 0.00 33.46 2.74
3762 3859 6.077838 CGAAACACCTTAAAATGAGTGCTAC 58.922 40.000 0.00 0.00 33.46 3.58
3763 3860 5.761234 ACGAAACACCTTAAAATGAGTGCTA 59.239 36.000 0.00 0.00 33.46 3.49
3764 3861 4.578928 ACGAAACACCTTAAAATGAGTGCT 59.421 37.500 0.00 0.00 33.46 4.40
3765 3862 4.855531 ACGAAACACCTTAAAATGAGTGC 58.144 39.130 0.00 0.00 33.46 4.40
3766 3863 5.238650 AGGACGAAACACCTTAAAATGAGTG 59.761 40.000 0.00 0.00 36.30 3.51
3767 3864 5.238650 CAGGACGAAACACCTTAAAATGAGT 59.761 40.000 0.00 0.00 33.91 3.41
3768 3865 5.468746 TCAGGACGAAACACCTTAAAATGAG 59.531 40.000 0.00 0.00 33.91 2.90
3769 3866 5.369833 TCAGGACGAAACACCTTAAAATGA 58.630 37.500 0.00 0.00 33.91 2.57
3770 3867 5.682943 TCAGGACGAAACACCTTAAAATG 57.317 39.130 0.00 0.00 33.91 2.32
3771 3868 6.702716 TTTCAGGACGAAACACCTTAAAAT 57.297 33.333 0.00 0.00 38.72 1.82
3772 3869 6.512342 TTTTCAGGACGAAACACCTTAAAA 57.488 33.333 0.00 0.00 43.35 1.52
3773 3870 6.702716 ATTTTCAGGACGAAACACCTTAAA 57.297 33.333 0.00 0.00 43.35 1.52
3774 3871 6.702716 AATTTTCAGGACGAAACACCTTAA 57.297 33.333 0.00 0.00 43.35 1.85
3775 3872 6.702716 AAATTTTCAGGACGAAACACCTTA 57.297 33.333 0.00 0.00 43.35 2.69
3776 3873 5.592104 AAATTTTCAGGACGAAACACCTT 57.408 34.783 0.00 0.00 43.35 3.50
3777 3874 5.591067 TGTAAATTTTCAGGACGAAACACCT 59.409 36.000 0.00 0.00 43.35 4.00
3778 3875 5.684184 GTGTAAATTTTCAGGACGAAACACC 59.316 40.000 0.00 0.00 43.35 4.16
3779 3876 6.195798 GTGTGTAAATTTTCAGGACGAAACAC 59.804 38.462 0.00 1.41 43.35 3.32
3780 3877 6.127980 TGTGTGTAAATTTTCAGGACGAAACA 60.128 34.615 0.00 0.00 43.35 2.83
3781 3878 6.195798 GTGTGTGTAAATTTTCAGGACGAAAC 59.804 38.462 0.00 0.00 43.35 2.78
3782 3879 6.127980 TGTGTGTGTAAATTTTCAGGACGAAA 60.128 34.615 0.00 0.00 41.95 3.46
3783 3880 5.354513 TGTGTGTGTAAATTTTCAGGACGAA 59.645 36.000 0.00 0.00 0.00 3.85
3784 3881 4.876679 TGTGTGTGTAAATTTTCAGGACGA 59.123 37.500 0.00 0.00 0.00 4.20
3785 3882 5.163302 TGTGTGTGTAAATTTTCAGGACG 57.837 39.130 0.00 0.00 0.00 4.79
3786 3883 5.402270 GCATGTGTGTGTAAATTTTCAGGAC 59.598 40.000 0.00 0.00 0.00 3.85
3787 3884 5.301551 AGCATGTGTGTGTAAATTTTCAGGA 59.698 36.000 0.00 0.00 0.00 3.86
3788 3885 5.531634 AGCATGTGTGTGTAAATTTTCAGG 58.468 37.500 0.00 0.00 0.00 3.86
3789 3886 7.467557 AAAGCATGTGTGTGTAAATTTTCAG 57.532 32.000 0.00 0.00 0.00 3.02
3790 3887 8.976471 CATAAAGCATGTGTGTGTAAATTTTCA 58.024 29.630 0.00 0.00 0.00 2.69
3791 3888 8.977505 ACATAAAGCATGTGTGTGTAAATTTTC 58.022 29.630 0.00 0.00 46.41 2.29
3792 3889 8.885494 ACATAAAGCATGTGTGTGTAAATTTT 57.115 26.923 0.00 0.00 46.41 1.82
3806 3903 8.546244 CACACATACTTAGAGACATAAAGCATG 58.454 37.037 0.00 0.00 40.78 4.06
3807 3904 8.260818 ACACACATACTTAGAGACATAAAGCAT 58.739 33.333 0.00 0.00 0.00 3.79
3808 3905 7.611770 ACACACATACTTAGAGACATAAAGCA 58.388 34.615 0.00 0.00 0.00 3.91
3809 3906 9.751542 ATACACACATACTTAGAGACATAAAGC 57.248 33.333 0.00 0.00 0.00 3.51
3853 3950 9.913451 GATCAAAATTCAAATTTTCACGTTTCA 57.087 25.926 9.84 0.00 44.38 2.69
3854 3951 9.913451 TGATCAAAATTCAAATTTTCACGTTTC 57.087 25.926 9.84 3.80 44.38 2.78
3856 3953 9.919348 CTTGATCAAAATTCAAATTTTCACGTT 57.081 25.926 9.88 0.00 44.38 3.99
3857 3954 9.097257 ACTTGATCAAAATTCAAATTTTCACGT 57.903 25.926 9.88 7.30 44.38 4.49
3858 3955 9.571804 GACTTGATCAAAATTCAAATTTTCACG 57.428 29.630 9.88 6.81 44.38 4.35
3874 3971 5.034852 TCAGACCAGTTTGACTTGATCAA 57.965 39.130 8.12 8.12 45.92 2.57
3875 3972 4.687901 TCAGACCAGTTTGACTTGATCA 57.312 40.909 0.00 0.00 34.65 2.92
3876 3973 6.376978 CAAATCAGACCAGTTTGACTTGATC 58.623 40.000 6.66 0.00 34.27 2.92
3877 3974 5.242393 CCAAATCAGACCAGTTTGACTTGAT 59.758 40.000 12.43 0.00 34.27 2.57
3878 3975 4.580167 CCAAATCAGACCAGTTTGACTTGA 59.420 41.667 12.43 0.00 34.27 3.02
3879 3976 4.580167 TCCAAATCAGACCAGTTTGACTTG 59.420 41.667 5.75 5.75 35.43 3.16
3880 3977 4.580580 GTCCAAATCAGACCAGTTTGACTT 59.419 41.667 0.00 0.00 35.43 3.01
3881 3978 4.137543 GTCCAAATCAGACCAGTTTGACT 58.862 43.478 0.00 0.00 35.43 3.41
3882 3979 3.882888 TGTCCAAATCAGACCAGTTTGAC 59.117 43.478 0.00 0.00 35.43 3.18
3883 3980 4.163441 TGTCCAAATCAGACCAGTTTGA 57.837 40.909 0.00 0.00 35.43 2.69
3884 3981 5.458041 AATGTCCAAATCAGACCAGTTTG 57.542 39.130 0.00 0.00 33.09 2.93
3885 3982 5.835280 AGAAATGTCCAAATCAGACCAGTTT 59.165 36.000 0.00 0.00 33.09 2.66
3886 3983 5.242393 CAGAAATGTCCAAATCAGACCAGTT 59.758 40.000 0.00 0.00 33.09 3.16
3887 3984 4.763793 CAGAAATGTCCAAATCAGACCAGT 59.236 41.667 0.00 0.00 33.09 4.00
3888 3985 5.005740 TCAGAAATGTCCAAATCAGACCAG 58.994 41.667 0.00 0.00 33.09 4.00
3889 3986 4.984295 TCAGAAATGTCCAAATCAGACCA 58.016 39.130 0.00 0.00 33.09 4.02
3890 3987 6.327934 CAATCAGAAATGTCCAAATCAGACC 58.672 40.000 0.00 0.00 33.09 3.85
3891 3988 6.071728 ACCAATCAGAAATGTCCAAATCAGAC 60.072 38.462 0.00 0.00 34.72 3.51
3892 3989 6.012113 ACCAATCAGAAATGTCCAAATCAGA 58.988 36.000 0.00 0.00 0.00 3.27
3893 3990 6.276832 ACCAATCAGAAATGTCCAAATCAG 57.723 37.500 0.00 0.00 0.00 2.90
3894 3991 6.295236 GGAACCAATCAGAAATGTCCAAATCA 60.295 38.462 0.00 0.00 0.00 2.57
3895 3992 6.071165 AGGAACCAATCAGAAATGTCCAAATC 60.071 38.462 0.00 0.00 0.00 2.17
3896 3993 5.781818 AGGAACCAATCAGAAATGTCCAAAT 59.218 36.000 0.00 0.00 0.00 2.32
3897 3994 5.010922 CAGGAACCAATCAGAAATGTCCAAA 59.989 40.000 0.00 0.00 0.00 3.28
3898 3995 4.523943 CAGGAACCAATCAGAAATGTCCAA 59.476 41.667 0.00 0.00 0.00 3.53
3899 3996 4.081406 CAGGAACCAATCAGAAATGTCCA 58.919 43.478 0.00 0.00 0.00 4.02
3900 3997 3.119352 GCAGGAACCAATCAGAAATGTCC 60.119 47.826 0.00 0.00 0.00 4.02
3901 3998 3.760684 AGCAGGAACCAATCAGAAATGTC 59.239 43.478 0.00 0.00 0.00 3.06
3902 3999 3.771216 AGCAGGAACCAATCAGAAATGT 58.229 40.909 0.00 0.00 0.00 2.71
3903 4000 4.946157 AGTAGCAGGAACCAATCAGAAATG 59.054 41.667 0.00 0.00 0.00 2.32
3904 4001 5.184892 AGTAGCAGGAACCAATCAGAAAT 57.815 39.130 0.00 0.00 0.00 2.17
3905 4002 4.640771 AGTAGCAGGAACCAATCAGAAA 57.359 40.909 0.00 0.00 0.00 2.52
3918 4015 2.224281 TGTGTCCACAGAAAGTAGCAGG 60.224 50.000 0.00 0.00 36.21 4.85
3943 4040 2.240493 CCTCAGTCAAACGAGGTGTT 57.760 50.000 0.00 0.00 43.32 3.32
3973 4070 2.038387 ACCTTGGGTCGATACATTGC 57.962 50.000 0.00 0.00 0.00 3.56
4053 4150 2.097825 GAGAGGGAGCATGCAACATTT 58.902 47.619 21.98 4.67 0.00 2.32
4054 4151 1.284198 AGAGAGGGAGCATGCAACATT 59.716 47.619 21.98 0.00 0.00 2.71
4055 4152 0.917533 AGAGAGGGAGCATGCAACAT 59.082 50.000 21.98 9.69 0.00 2.71
4062 4159 2.703007 GACCATGTAAGAGAGGGAGCAT 59.297 50.000 0.00 0.00 0.00 3.79
4063 4160 2.111384 GACCATGTAAGAGAGGGAGCA 58.889 52.381 0.00 0.00 0.00 4.26
4064 4161 2.111384 TGACCATGTAAGAGAGGGAGC 58.889 52.381 0.00 0.00 0.00 4.70
4136 4233 2.628696 CCGCAAGCTGCATTCCACA 61.629 57.895 1.02 0.00 45.36 4.17
4228 4326 1.539157 GTTTCTGCTGAAGAAGGGGG 58.461 55.000 6.13 0.00 45.64 5.40
4267 4365 1.719780 GAAGTCGTTGTGTTAGGAGCG 59.280 52.381 0.00 0.00 0.00 5.03
4289 4387 2.743718 CTGGACAGGTCAGGCGTT 59.256 61.111 1.41 0.00 0.00 4.84
4291 4389 3.699894 AGCTGGACAGGTCAGGCG 61.700 66.667 0.00 0.00 33.18 5.52
4396 4508 0.182775 ACAGCCCCGTTCTTGAACTT 59.817 50.000 11.11 0.00 0.00 2.66
4450 4562 3.058224 GCTTATTATGGTGATCGCCAACC 60.058 47.826 30.71 12.43 42.48 3.77
4464 4576 4.406003 ACGACCCAGAACAGAGCTTATTAT 59.594 41.667 0.00 0.00 0.00 1.28
4474 4586 6.975197 CAGCATATATATACGACCCAGAACAG 59.025 42.308 0.00 0.00 0.00 3.16
4491 4605 5.185454 CAAGTTCCCAAGTCACAGCATATA 58.815 41.667 0.00 0.00 0.00 0.86
4492 4606 4.012374 CAAGTTCCCAAGTCACAGCATAT 58.988 43.478 0.00 0.00 0.00 1.78
4501 4615 1.145119 ACCTTCCCAAGTTCCCAAGTC 59.855 52.381 0.00 0.00 0.00 3.01
4504 4618 1.289530 ACAACCTTCCCAAGTTCCCAA 59.710 47.619 0.00 0.00 0.00 4.12
4535 4651 1.247567 AACCCAGAAACATCAAGCCG 58.752 50.000 0.00 0.00 0.00 5.52
4623 4739 7.888021 TGGACAATAATGTTACCATTTCTCACT 59.112 33.333 0.00 0.00 41.50 3.41
4740 4863 5.405269 ACAAAAGCATAAAATTCTCCGCAAC 59.595 36.000 0.00 0.00 0.00 4.17
4812 4935 1.086696 CCAGACACCGGCATTACAAG 58.913 55.000 0.00 0.00 0.00 3.16
4862 4988 3.923017 ACAGTACAAGCTGCCAAATTC 57.077 42.857 0.00 0.00 39.96 2.17
4884 5010 4.435651 CGAACTTCTTATTTTGGCGAGTCC 60.436 45.833 0.00 0.00 0.00 3.85
4885 5011 4.151867 ACGAACTTCTTATTTTGGCGAGTC 59.848 41.667 0.00 0.00 0.00 3.36
4922 5427 5.270853 CAGTTCGAACTCCAAACGATTTTT 58.729 37.500 27.54 0.00 37.08 1.94
4923 5428 4.788521 GCAGTTCGAACTCCAAACGATTTT 60.789 41.667 27.54 0.00 37.08 1.82
4924 5429 3.303791 GCAGTTCGAACTCCAAACGATTT 60.304 43.478 27.54 0.00 37.08 2.17
4925 5430 2.223377 GCAGTTCGAACTCCAAACGATT 59.777 45.455 27.54 0.37 37.08 3.34
4926 5431 1.798813 GCAGTTCGAACTCCAAACGAT 59.201 47.619 27.54 1.17 37.08 3.73
4927 5432 1.202486 AGCAGTTCGAACTCCAAACGA 60.202 47.619 27.54 0.00 37.08 3.85
4928 5433 1.070577 CAGCAGTTCGAACTCCAAACG 60.071 52.381 27.54 16.14 37.08 3.60
4929 5434 1.264288 CCAGCAGTTCGAACTCCAAAC 59.736 52.381 27.54 14.27 37.08 2.93
4930 5435 1.593196 CCAGCAGTTCGAACTCCAAA 58.407 50.000 27.54 0.00 37.08 3.28
4931 5436 0.884704 GCCAGCAGTTCGAACTCCAA 60.885 55.000 27.54 0.00 37.08 3.53
4969 5474 2.124529 TTCACAGCGTGGCAACCA 60.125 55.556 8.46 0.00 33.87 3.67
5028 5548 2.764128 GAGATGGGCCGGACTGGA 60.764 66.667 7.57 0.00 42.00 3.86
5029 5549 2.317149 GAAGAGATGGGCCGGACTGG 62.317 65.000 7.57 0.00 42.50 4.00
5030 5550 1.144936 GAAGAGATGGGCCGGACTG 59.855 63.158 7.57 0.00 0.00 3.51
5031 5551 2.066999 GGAAGAGATGGGCCGGACT 61.067 63.158 7.57 0.00 0.00 3.85
5078 5600 1.447317 GAGAGAGAGAGGGCGAGCTG 61.447 65.000 0.00 0.00 0.00 4.24
5079 5601 1.152963 GAGAGAGAGAGGGCGAGCT 60.153 63.158 0.00 0.00 0.00 4.09
5080 5602 1.152963 AGAGAGAGAGAGGGCGAGC 60.153 63.158 0.00 0.00 0.00 5.03
5081 5603 0.469917 AGAGAGAGAGAGAGGGCGAG 59.530 60.000 0.00 0.00 0.00 5.03
5082 5604 0.468226 GAGAGAGAGAGAGAGGGCGA 59.532 60.000 0.00 0.00 0.00 5.54
5083 5605 0.535102 GGAGAGAGAGAGAGAGGGCG 60.535 65.000 0.00 0.00 0.00 6.13
5084 5606 0.178990 GGGAGAGAGAGAGAGAGGGC 60.179 65.000 0.00 0.00 0.00 5.19
5085 5607 1.133792 GTGGGAGAGAGAGAGAGAGGG 60.134 61.905 0.00 0.00 0.00 4.30
5086 5608 1.846439 AGTGGGAGAGAGAGAGAGAGG 59.154 57.143 0.00 0.00 0.00 3.69
5090 5612 0.033601 GCCAGTGGGAGAGAGAGAGA 60.034 60.000 12.15 0.00 35.59 3.10
5145 5684 1.719725 GACTCTCATCTCGCCGCTGA 61.720 60.000 0.00 0.00 0.00 4.26
5146 5685 1.299014 GACTCTCATCTCGCCGCTG 60.299 63.158 0.00 0.00 0.00 5.18
5147 5686 1.723608 CTGACTCTCATCTCGCCGCT 61.724 60.000 0.00 0.00 0.00 5.52
5148 5687 1.299014 CTGACTCTCATCTCGCCGC 60.299 63.158 0.00 0.00 0.00 6.53
5149 5688 1.299014 GCTGACTCTCATCTCGCCG 60.299 63.158 0.00 0.00 0.00 6.46
5150 5689 1.299014 CGCTGACTCTCATCTCGCC 60.299 63.158 0.00 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.