Multiple sequence alignment - TraesCS5A01G296300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G296300 | chr5A | 100.000 | 5285 | 0 | 0 | 1 | 5285 | 504771707 | 504776991 | 0.000000e+00 | 9760.0 |
1 | TraesCS5A01G296300 | chr5D | 89.408 | 2719 | 176 | 51 | 2373 | 5032 | 399151299 | 399153964 | 0.000000e+00 | 3323.0 |
2 | TraesCS5A01G296300 | chr5D | 90.271 | 812 | 37 | 15 | 1582 | 2360 | 399150680 | 399151482 | 0.000000e+00 | 1024.0 |
3 | TraesCS5A01G296300 | chr5D | 87.479 | 583 | 43 | 13 | 968 | 1546 | 399150121 | 399150677 | 0.000000e+00 | 645.0 |
4 | TraesCS5A01G296300 | chr5B | 90.726 | 1639 | 88 | 33 | 1927 | 3533 | 479325360 | 479326966 | 0.000000e+00 | 2126.0 |
5 | TraesCS5A01G296300 | chr5B | 88.622 | 1538 | 102 | 25 | 3532 | 5032 | 479327124 | 479328625 | 0.000000e+00 | 1803.0 |
6 | TraesCS5A01G296300 | chr5B | 98.377 | 493 | 8 | 0 | 336 | 828 | 41083938 | 41084430 | 0.000000e+00 | 867.0 |
7 | TraesCS5A01G296300 | chr5B | 87.761 | 670 | 45 | 25 | 826 | 1477 | 479324144 | 479324794 | 0.000000e+00 | 749.0 |
8 | TraesCS5A01G296300 | chr5B | 84.455 | 431 | 40 | 10 | 1484 | 1911 | 479324884 | 479325290 | 2.970000e-107 | 399.0 |
9 | TraesCS5A01G296300 | chr5B | 88.770 | 187 | 15 | 5 | 2373 | 2556 | 479325614 | 479325797 | 1.920000e-54 | 224.0 |
10 | TraesCS5A01G296300 | chr5B | 88.525 | 183 | 16 | 3 | 2183 | 2360 | 479325811 | 479325993 | 3.210000e-52 | 217.0 |
11 | TraesCS5A01G296300 | chr6A | 98.188 | 828 | 15 | 0 | 1 | 828 | 105158635 | 105157808 | 0.000000e+00 | 1447.0 |
12 | TraesCS5A01G296300 | chr3A | 97.252 | 837 | 22 | 1 | 1 | 837 | 222081107 | 222081942 | 0.000000e+00 | 1417.0 |
13 | TraesCS5A01G296300 | chr7B | 97.105 | 829 | 24 | 0 | 1 | 829 | 711170877 | 711171705 | 0.000000e+00 | 1399.0 |
14 | TraesCS5A01G296300 | chr4A | 96.984 | 829 | 19 | 1 | 1 | 829 | 216812926 | 216812104 | 0.000000e+00 | 1387.0 |
15 | TraesCS5A01G296300 | chr7A | 96.643 | 834 | 24 | 3 | 1 | 831 | 224970563 | 224969731 | 0.000000e+00 | 1382.0 |
16 | TraesCS5A01G296300 | chr1B | 95.809 | 692 | 21 | 1 | 137 | 828 | 331127289 | 331127972 | 0.000000e+00 | 1110.0 |
17 | TraesCS5A01G296300 | chr1A | 96.957 | 493 | 12 | 1 | 336 | 828 | 532534433 | 532533944 | 0.000000e+00 | 824.0 |
18 | TraesCS5A01G296300 | chr1A | 100.000 | 45 | 0 | 0 | 785 | 829 | 532536017 | 532536061 | 3.390000e-12 | 84.2 |
19 | TraesCS5A01G296300 | chr3B | 86.708 | 647 | 71 | 10 | 1254 | 1895 | 170130524 | 170131160 | 0.000000e+00 | 704.0 |
20 | TraesCS5A01G296300 | chr3B | 85.526 | 76 | 11 | 0 | 5063 | 5138 | 825974931 | 825974856 | 4.390000e-11 | 80.5 |
21 | TraesCS5A01G296300 | chr1D | 96.591 | 264 | 9 | 0 | 3725 | 3988 | 110387740 | 110388003 | 6.280000e-119 | 438.0 |
22 | TraesCS5A01G296300 | chr1D | 92.469 | 239 | 15 | 3 | 1062 | 1298 | 91563939 | 91564176 | 6.560000e-89 | 339.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G296300 | chr5A | 504771707 | 504776991 | 5284 | False | 9760.000000 | 9760 | 100.000000 | 1 | 5285 | 1 | chr5A.!!$F1 | 5284 |
1 | TraesCS5A01G296300 | chr5D | 399150121 | 399153964 | 3843 | False | 1664.000000 | 3323 | 89.052667 | 968 | 5032 | 3 | chr5D.!!$F1 | 4064 |
2 | TraesCS5A01G296300 | chr5B | 479324144 | 479328625 | 4481 | False | 919.666667 | 2126 | 88.143167 | 826 | 5032 | 6 | chr5B.!!$F2 | 4206 |
3 | TraesCS5A01G296300 | chr6A | 105157808 | 105158635 | 827 | True | 1447.000000 | 1447 | 98.188000 | 1 | 828 | 1 | chr6A.!!$R1 | 827 |
4 | TraesCS5A01G296300 | chr3A | 222081107 | 222081942 | 835 | False | 1417.000000 | 1417 | 97.252000 | 1 | 837 | 1 | chr3A.!!$F1 | 836 |
5 | TraesCS5A01G296300 | chr7B | 711170877 | 711171705 | 828 | False | 1399.000000 | 1399 | 97.105000 | 1 | 829 | 1 | chr7B.!!$F1 | 828 |
6 | TraesCS5A01G296300 | chr4A | 216812104 | 216812926 | 822 | True | 1387.000000 | 1387 | 96.984000 | 1 | 829 | 1 | chr4A.!!$R1 | 828 |
7 | TraesCS5A01G296300 | chr7A | 224969731 | 224970563 | 832 | True | 1382.000000 | 1382 | 96.643000 | 1 | 831 | 1 | chr7A.!!$R1 | 830 |
8 | TraesCS5A01G296300 | chr1B | 331127289 | 331127972 | 683 | False | 1110.000000 | 1110 | 95.809000 | 137 | 828 | 1 | chr1B.!!$F1 | 691 |
9 | TraesCS5A01G296300 | chr3B | 170130524 | 170131160 | 636 | False | 704.000000 | 704 | 86.708000 | 1254 | 1895 | 1 | chr3B.!!$F1 | 641 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
832 | 836 | 1.141881 | GAGAATCTGAGCCGCGGAA | 59.858 | 57.895 | 33.48 | 12.84 | 35.03 | 4.30 | F |
2004 | 2189 | 0.250553 | TGCTTTGTTGGTAGGTCCGG | 60.251 | 55.000 | 0.00 | 0.00 | 39.52 | 5.14 | F |
2380 | 2571 | 0.400594 | ACAGCCCTTTTAGCGGAAGT | 59.599 | 50.000 | 0.00 | 0.00 | 34.64 | 3.01 | F |
4026 | 4401 | 0.677414 | GGAGAGTCGAGTCGAACCCT | 60.677 | 60.000 | 18.42 | 13.95 | 37.72 | 4.34 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2449 | 2640 | 0.690762 | AGGCACGGTGGTGTTAGAAT | 59.309 | 50.000 | 10.6 | 0.0 | 46.13 | 2.40 | R |
2928 | 3132 | 1.004440 | AGCGGACAGGACAAGCTTC | 60.004 | 57.895 | 0.0 | 0.0 | 34.05 | 3.86 | R |
4271 | 4655 | 1.682323 | GTTCCTCCTACGGGATCTCAC | 59.318 | 57.143 | 0.0 | 0.0 | 41.36 | 3.51 | R |
5037 | 5447 | 0.108396 | GGTGCTTGGGTGCCAAAAAT | 59.892 | 50.000 | 0.0 | 0.0 | 43.44 | 1.82 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
198 | 199 | 6.591935 | AGTCTGTGAATTTCTGACCAACTTA | 58.408 | 36.000 | 13.57 | 0.00 | 35.42 | 2.24 |
214 | 215 | 4.168760 | CAACTTAAGGTAAGGACGTACGG | 58.831 | 47.826 | 21.06 | 1.43 | 40.08 | 4.02 |
530 | 534 | 2.225491 | CGCCAAAAGTTTTCCTCGATCA | 59.775 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
554 | 558 | 3.152341 | CAGCTGATTTCCTTGGAGTTGT | 58.848 | 45.455 | 8.42 | 0.00 | 0.00 | 3.32 |
676 | 680 | 2.368875 | CCTCCACTGTGTTGAAGTAGGT | 59.631 | 50.000 | 7.08 | 0.00 | 0.00 | 3.08 |
832 | 836 | 1.141881 | GAGAATCTGAGCCGCGGAA | 59.858 | 57.895 | 33.48 | 12.84 | 35.03 | 4.30 |
833 | 837 | 1.148759 | GAGAATCTGAGCCGCGGAAC | 61.149 | 60.000 | 33.48 | 21.85 | 35.03 | 3.62 |
834 | 838 | 1.447838 | GAATCTGAGCCGCGGAACA | 60.448 | 57.895 | 33.48 | 25.27 | 35.03 | 3.18 |
836 | 840 | 2.859273 | AATCTGAGCCGCGGAACAGG | 62.859 | 60.000 | 34.20 | 22.91 | 35.03 | 4.00 |
837 | 841 | 4.069232 | CTGAGCCGCGGAACAGGA | 62.069 | 66.667 | 33.48 | 4.29 | 0.00 | 3.86 |
838 | 842 | 3.997064 | CTGAGCCGCGGAACAGGAG | 62.997 | 68.421 | 33.48 | 10.98 | 0.00 | 3.69 |
874 | 878 | 2.120312 | CTTTTCTACTCCCCTCCTCCC | 58.880 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
893 | 911 | 3.330720 | CCCTTCCAGAACCCGCCT | 61.331 | 66.667 | 0.00 | 0.00 | 0.00 | 5.52 |
894 | 912 | 2.269241 | CCTTCCAGAACCCGCCTC | 59.731 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
899 | 917 | 2.685380 | CAGAACCCGCCTCCCTCT | 60.685 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
907 | 925 | 2.124693 | CGCCTCCCTCTGACCTCTC | 61.125 | 68.421 | 0.00 | 0.00 | 0.00 | 3.20 |
943 | 962 | 4.470170 | TCGCACGATCGACCACGG | 62.470 | 66.667 | 24.34 | 4.66 | 40.21 | 4.94 |
1293 | 1316 | 2.506962 | GACACCAACACCGTCCCA | 59.493 | 61.111 | 0.00 | 0.00 | 0.00 | 4.37 |
1298 | 1321 | 1.128809 | ACCAACACCGTCCCATGGTA | 61.129 | 55.000 | 11.73 | 0.00 | 42.38 | 3.25 |
1299 | 1322 | 0.675522 | CCAACACCGTCCCATGGTAC | 60.676 | 60.000 | 11.73 | 3.73 | 34.66 | 3.34 |
1300 | 1323 | 1.017177 | CAACACCGTCCCATGGTACG | 61.017 | 60.000 | 21.92 | 21.92 | 34.66 | 3.67 |
1326 | 1349 | 2.978010 | CGCAACCGCCCAACTCTT | 60.978 | 61.111 | 0.00 | 0.00 | 33.11 | 2.85 |
1343 | 1366 | 1.001181 | TCTTTTAACTCCCCCGACACG | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 4.49 |
1344 | 1367 | 1.001181 | CTTTTAACTCCCCCGACACGA | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
1345 | 1368 | 0.318120 | TTTAACTCCCCCGACACGAC | 59.682 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
1357 | 1380 | 3.918977 | CACGACGACACCCACCCA | 61.919 | 66.667 | 0.00 | 0.00 | 0.00 | 4.51 |
1458 | 1487 | 2.509336 | GCCATCACGGTCAGTCGG | 60.509 | 66.667 | 0.00 | 0.00 | 36.97 | 4.79 |
1477 | 1509 | 1.134068 | GGTAGATGCTGGTTCCCTTCC | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 3.46 |
1546 | 1662 | 1.251251 | GATTGGTTCCTGCAGCTTGT | 58.749 | 50.000 | 8.66 | 0.00 | 0.00 | 3.16 |
1548 | 1664 | 0.746063 | TTGGTTCCTGCAGCTTGTTG | 59.254 | 50.000 | 8.66 | 0.00 | 0.00 | 3.33 |
1549 | 1665 | 1.006922 | GGTTCCTGCAGCTTGTTGC | 60.007 | 57.895 | 8.66 | 2.51 | 44.33 | 4.17 |
1550 | 1666 | 1.006922 | GTTCCTGCAGCTTGTTGCC | 60.007 | 57.895 | 8.66 | 0.00 | 43.43 | 4.52 |
1557 | 1673 | 0.316204 | GCAGCTTGTTGCCAGTTCAT | 59.684 | 50.000 | 0.00 | 0.00 | 44.23 | 2.57 |
1633 | 1750 | 4.202305 | TGGTGGGATTGGACAAATTGAAAC | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.78 |
1665 | 1782 | 0.529833 | CGCATTTGGTGGTGGCATAA | 59.470 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
1747 | 1866 | 5.475564 | AGTTCAGTTCACTCCTTCTCTAGTC | 59.524 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1784 | 1907 | 3.375922 | GGTTCACTGTTGTCCTCGAAAAA | 59.624 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
1830 | 1957 | 3.679980 | GCTAGATTTGACAGACGAGCAAA | 59.320 | 43.478 | 0.00 | 0.00 | 36.15 | 3.68 |
1881 | 2008 | 3.512329 | TGACCTGCTTTGCATGATTTCAT | 59.488 | 39.130 | 0.00 | 0.00 | 38.13 | 2.57 |
1890 | 2017 | 6.578163 | TTTGCATGATTTCATCTGTCTGAA | 57.422 | 33.333 | 0.00 | 0.00 | 33.61 | 3.02 |
1923 | 2057 | 8.870116 | ACTTTCTCTTGGCCAATAAAATAAGTT | 58.130 | 29.630 | 20.85 | 6.56 | 0.00 | 2.66 |
1925 | 2059 | 9.487790 | TTTCTCTTGGCCAATAAAATAAGTTTG | 57.512 | 29.630 | 20.85 | 2.08 | 0.00 | 2.93 |
2004 | 2189 | 0.250553 | TGCTTTGTTGGTAGGTCCGG | 60.251 | 55.000 | 0.00 | 0.00 | 39.52 | 5.14 |
2078 | 2263 | 5.853572 | TTCAGGGTTTGGTAGATAAGGTT | 57.146 | 39.130 | 0.00 | 0.00 | 0.00 | 3.50 |
2079 | 2264 | 6.956102 | TTCAGGGTTTGGTAGATAAGGTTA | 57.044 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
2082 | 2267 | 7.935405 | TCAGGGTTTGGTAGATAAGGTTATTT | 58.065 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
2083 | 2268 | 9.060137 | TCAGGGTTTGGTAGATAAGGTTATTTA | 57.940 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2122 | 2307 | 8.489559 | CAATTATTTGGTGTTGTTGATCAAGTG | 58.510 | 33.333 | 8.80 | 0.00 | 36.66 | 3.16 |
2130 | 2315 | 3.044235 | TGTTGATCAAGTGATGCGTCT | 57.956 | 42.857 | 8.80 | 0.00 | 34.37 | 4.18 |
2154 | 2339 | 1.141053 | ACAAGGACAGGTTGGACACTC | 59.859 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
2249 | 2435 | 4.573607 | AGCAGTTATGTGTATGCTGTCATG | 59.426 | 41.667 | 0.00 | 0.00 | 46.75 | 3.07 |
2297 | 2488 | 1.992667 | GCTTTTAAAATGGAGCGTGGC | 59.007 | 47.619 | 0.09 | 0.00 | 0.00 | 5.01 |
2371 | 2562 | 7.888546 | ACTCAAGTTTACATATACAGCCCTTTT | 59.111 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
2380 | 2571 | 0.400594 | ACAGCCCTTTTAGCGGAAGT | 59.599 | 50.000 | 0.00 | 0.00 | 34.64 | 3.01 |
2404 | 2595 | 5.221843 | TGCTCTGGTACTTTGGACTTTGTAT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2405 | 2596 | 6.014070 | TGCTCTGGTACTTTGGACTTTGTATA | 60.014 | 38.462 | 0.00 | 0.00 | 0.00 | 1.47 |
2408 | 2599 | 7.391620 | TCTGGTACTTTGGACTTTGTATAAGG | 58.608 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
2432 | 2623 | 4.396166 | GGATAACAGCTGCAGTTATGTGTT | 59.604 | 41.667 | 27.88 | 17.45 | 41.02 | 3.32 |
2433 | 2624 | 3.904136 | AACAGCTGCAGTTATGTGTTC | 57.096 | 42.857 | 15.27 | 0.00 | 0.00 | 3.18 |
2438 | 2629 | 3.296516 | GCAGTTATGTGTTCGCTGC | 57.703 | 52.632 | 0.00 | 0.00 | 44.24 | 5.25 |
2442 | 2633 | 4.801147 | CAGTTATGTGTTCGCTGCATAT | 57.199 | 40.909 | 0.00 | 0.00 | 0.00 | 1.78 |
2443 | 2634 | 4.766007 | CAGTTATGTGTTCGCTGCATATC | 58.234 | 43.478 | 0.00 | 0.00 | 0.00 | 1.63 |
2444 | 2635 | 3.490896 | AGTTATGTGTTCGCTGCATATCG | 59.509 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
2445 | 2636 | 1.939974 | ATGTGTTCGCTGCATATCGT | 58.060 | 45.000 | 0.00 | 0.00 | 0.00 | 3.73 |
2446 | 2637 | 1.277326 | TGTGTTCGCTGCATATCGTC | 58.723 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2447 | 2638 | 1.135112 | TGTGTTCGCTGCATATCGTCT | 60.135 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
2449 | 2640 | 3.113322 | GTGTTCGCTGCATATCGTCTTA | 58.887 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
2471 | 2663 | 1.206132 | TCTAACACCACCGTGCCTATG | 59.794 | 52.381 | 0.00 | 0.00 | 44.40 | 2.23 |
2480 | 2672 | 2.486203 | CACCGTGCCTATGTTGCTTTTA | 59.514 | 45.455 | 0.00 | 0.00 | 0.00 | 1.52 |
2493 | 2685 | 3.296322 | TGCTTTTAAAATGGAGCGTGG | 57.704 | 42.857 | 0.09 | 0.00 | 37.94 | 4.94 |
2619 | 2816 | 0.800012 | TGTTAAATTCGGCCGCTGTC | 59.200 | 50.000 | 23.51 | 7.37 | 0.00 | 3.51 |
2633 | 2830 | 1.923204 | CGCTGTCAGCTGACTTACATC | 59.077 | 52.381 | 38.81 | 22.47 | 44.99 | 3.06 |
2703 | 2903 | 8.093307 | TCTGTATGCTTTTTATGCCAAATCAAA | 58.907 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
2713 | 2913 | 9.730705 | TTTTATGCCAAATCAAATAAATCACCA | 57.269 | 25.926 | 0.00 | 0.00 | 0.00 | 4.17 |
2862 | 3065 | 6.041069 | GCCTATCTGAAGACCTCTTAAGCTAA | 59.959 | 42.308 | 0.00 | 0.00 | 34.95 | 3.09 |
2863 | 3066 | 7.418025 | GCCTATCTGAAGACCTCTTAAGCTAAA | 60.418 | 40.741 | 0.00 | 0.00 | 34.95 | 1.85 |
2870 | 3073 | 7.936847 | TGAAGACCTCTTAAGCTAAAACATTCA | 59.063 | 33.333 | 0.00 | 0.00 | 36.11 | 2.57 |
2872 | 3075 | 8.100508 | AGACCTCTTAAGCTAAAACATTCAAC | 57.899 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2877 | 3080 | 8.458573 | TCTTAAGCTAAAACATTCAACCAAGA | 57.541 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
2922 | 3126 | 6.022315 | AGATTGTTCCTATCTAGATCCCCTG | 58.978 | 44.000 | 8.95 | 0.00 | 30.74 | 4.45 |
2934 | 3138 | 3.574354 | GATCCCCTGATCTTGAAGCTT | 57.426 | 47.619 | 0.00 | 0.00 | 43.44 | 3.74 |
2937 | 3141 | 2.026822 | TCCCCTGATCTTGAAGCTTGTC | 60.027 | 50.000 | 2.10 | 0.00 | 0.00 | 3.18 |
2943 | 3147 | 2.550830 | TCTTGAAGCTTGTCCTGTCC | 57.449 | 50.000 | 2.10 | 0.00 | 0.00 | 4.02 |
2944 | 3148 | 1.151668 | CTTGAAGCTTGTCCTGTCCG | 58.848 | 55.000 | 2.10 | 0.00 | 0.00 | 4.79 |
2960 | 3164 | 5.056480 | CCTGTCCGCTCATTAACATGATTA | 58.944 | 41.667 | 0.00 | 0.00 | 38.81 | 1.75 |
2964 | 3168 | 6.597672 | TGTCCGCTCATTAACATGATTACTTT | 59.402 | 34.615 | 0.00 | 0.00 | 38.81 | 2.66 |
2978 | 3183 | 8.815912 | ACATGATTACTTTAGGGCATTTCTTTT | 58.184 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
3005 | 3210 | 3.577848 | TGGGTTGGATTTGTTGGATGAAG | 59.422 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
3023 | 3228 | 7.341769 | TGGATGAAGGGTGGAATAATTAACTTG | 59.658 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
3036 | 3241 | 3.611766 | TTAACTTGCTGCTCCTAGTCC | 57.388 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
3057 | 3262 | 5.491635 | CCTTTGATAAGAAAGGCTGTAGC | 57.508 | 43.478 | 0.00 | 0.00 | 44.26 | 3.58 |
3059 | 3264 | 6.349300 | CCTTTGATAAGAAAGGCTGTAGCTA | 58.651 | 40.000 | 3.63 | 0.00 | 44.26 | 3.32 |
3068 | 3273 | 3.260269 | AGGCTGTAGCTACATATCCCA | 57.740 | 47.619 | 26.22 | 2.39 | 41.70 | 4.37 |
3078 | 3283 | 6.192970 | AGCTACATATCCCATGTTAAGCTT | 57.807 | 37.500 | 3.48 | 3.48 | 39.55 | 3.74 |
3103 | 3310 | 5.277058 | GCGATGATTACTTGGATTCAGTGAC | 60.277 | 44.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3112 | 3319 | 7.027874 | ACTTGGATTCAGTGACCCTTTATTA | 57.972 | 36.000 | 10.98 | 0.00 | 0.00 | 0.98 |
3143 | 3350 | 2.438021 | ACAGTGGAAGTAAGCCTGACAA | 59.562 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
3150 | 3357 | 3.838244 | AGTAAGCCTGACAAACACTGA | 57.162 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
3152 | 3359 | 1.299541 | AAGCCTGACAAACACTGACG | 58.700 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3157 | 3364 | 3.191669 | CCTGACAAACACTGACGTACAA | 58.808 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
3194 | 3402 | 9.461312 | TGGCAATAATTTTACTGACATAACTCT | 57.539 | 29.630 | 0.00 | 0.00 | 0.00 | 3.24 |
3208 | 3416 | 8.628630 | TGACATAACTCTGATCTCTACTATGG | 57.371 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
3255 | 3463 | 9.987272 | TTGATAGAGAAACATATGTAGGTGATG | 57.013 | 33.333 | 9.21 | 0.00 | 0.00 | 3.07 |
3257 | 3465 | 6.239217 | AGAGAAACATATGTAGGTGATGCA | 57.761 | 37.500 | 9.21 | 0.00 | 0.00 | 3.96 |
3271 | 3479 | 3.356290 | GTGATGCATTTCCCCTTACAGT | 58.644 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
3272 | 3480 | 3.763897 | GTGATGCATTTCCCCTTACAGTT | 59.236 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3318 | 3529 | 1.180029 | ACCATGCCAACAGAATGCTC | 58.820 | 50.000 | 0.00 | 0.00 | 42.53 | 4.26 |
3363 | 3574 | 9.134734 | GATTTCTCGTTAAAATTACAAATGCCA | 57.865 | 29.630 | 0.00 | 0.00 | 0.00 | 4.92 |
3365 | 3576 | 9.482627 | TTTCTCGTTAAAATTACAAATGCCAAT | 57.517 | 25.926 | 0.00 | 0.00 | 0.00 | 3.16 |
3386 | 3597 | 9.261318 | GCCAATTTGCGATTAAAATTTACTTTC | 57.739 | 29.630 | 0.00 | 0.00 | 35.55 | 2.62 |
3418 | 3629 | 9.933723 | AAATTCCTCTCTATTTGTTTCAATTGG | 57.066 | 29.630 | 5.42 | 0.00 | 0.00 | 3.16 |
3446 | 3658 | 5.061721 | AGTTCCAAGTCTGTATTTGGGTT | 57.938 | 39.130 | 3.66 | 0.00 | 41.59 | 4.11 |
3476 | 3692 | 9.431887 | GTACTTGTCCTCACAAACTTCATATTA | 57.568 | 33.333 | 0.00 | 0.00 | 42.13 | 0.98 |
3502 | 3718 | 8.425577 | AGAAATACCATCTTATCAAGAACACG | 57.574 | 34.615 | 0.00 | 0.00 | 41.63 | 4.49 |
3513 | 3729 | 1.670811 | CAAGAACACGTGACCAGCTTT | 59.329 | 47.619 | 25.01 | 3.39 | 0.00 | 3.51 |
3516 | 3732 | 3.740115 | AGAACACGTGACCAGCTTTTAT | 58.260 | 40.909 | 25.01 | 0.00 | 0.00 | 1.40 |
3529 | 3745 | 4.646492 | CCAGCTTTTATCATGCCTTACCTT | 59.354 | 41.667 | 0.00 | 0.00 | 0.00 | 3.50 |
3533 | 3749 | 7.917505 | CAGCTTTTATCATGCCTTACCTTTTAG | 59.082 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
3535 | 3751 | 8.251026 | GCTTTTATCATGCCTTACCTTTTAGTT | 58.749 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3537 | 3753 | 9.921637 | TTTTATCATGCCTTACCTTTTAGTTTG | 57.078 | 29.630 | 0.00 | 0.00 | 0.00 | 2.93 |
3539 | 3755 | 6.969993 | TCATGCCTTACCTTTTAGTTTGTT | 57.030 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
3540 | 3756 | 8.644374 | ATCATGCCTTACCTTTTAGTTTGTTA | 57.356 | 30.769 | 0.00 | 0.00 | 0.00 | 2.41 |
3541 | 3757 | 8.644374 | TCATGCCTTACCTTTTAGTTTGTTAT | 57.356 | 30.769 | 0.00 | 0.00 | 0.00 | 1.89 |
3563 | 3938 | 2.158986 | AGAGAACCAGAATGATGGCTCG | 60.159 | 50.000 | 0.00 | 0.00 | 44.80 | 5.03 |
3568 | 3943 | 4.955811 | ACCAGAATGATGGCTCGTTATA | 57.044 | 40.909 | 0.00 | 0.00 | 44.80 | 0.98 |
3574 | 3949 | 6.364706 | CAGAATGATGGCTCGTTATACTCTTC | 59.635 | 42.308 | 0.00 | 0.00 | 39.69 | 2.87 |
3593 | 3968 | 4.335315 | TCTTCTGACATTGTGTTTGGTGAC | 59.665 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
3600 | 3975 | 2.897846 | TGTTTGGTGACGGTGCCG | 60.898 | 61.111 | 9.29 | 9.29 | 46.03 | 5.69 |
3624 | 3999 | 6.075572 | CGTGTTTCAGCTACTAAAAGTTTTGC | 60.076 | 38.462 | 11.18 | 5.76 | 0.00 | 3.68 |
3627 | 4002 | 5.744666 | TCAGCTACTAAAAGTTTTGCGTT | 57.255 | 34.783 | 11.18 | 0.00 | 0.00 | 4.84 |
3633 | 4008 | 5.674215 | ACTAAAAGTTTTGCGTTTCGTTG | 57.326 | 34.783 | 11.18 | 0.00 | 31.56 | 4.10 |
3638 | 4013 | 3.776340 | AGTTTTGCGTTTCGTTGGATTT | 58.224 | 36.364 | 0.00 | 0.00 | 0.00 | 2.17 |
3669 | 4044 | 8.479313 | TTGAACTACTGTGATCATACATCAAC | 57.521 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
3670 | 4045 | 7.610865 | TGAACTACTGTGATCATACATCAACA | 58.389 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
3705 | 4080 | 7.574607 | ACCCACATAGTAAAATAGGAGGAAAG | 58.425 | 38.462 | 0.00 | 0.00 | 0.00 | 2.62 |
3862 | 4237 | 3.575630 | TCGAGTGATTCTGAAAGGAACG | 58.424 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
3989 | 4364 | 7.607991 | AGTTAACATAGAGTGGAAATTGGTGAG | 59.392 | 37.037 | 8.61 | 0.00 | 0.00 | 3.51 |
3999 | 4374 | 6.828785 | AGTGGAAATTGGTGAGGTAATACATC | 59.171 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
4026 | 4401 | 0.677414 | GGAGAGTCGAGTCGAACCCT | 60.677 | 60.000 | 18.42 | 13.95 | 37.72 | 4.34 |
4047 | 4422 | 8.803397 | ACCCTCTGTACCAATTTTATTTAGTC | 57.197 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
4072 | 4456 | 7.933033 | TCGATCATCATTATGGACTCATTGAAA | 59.067 | 33.333 | 0.00 | 0.00 | 34.96 | 2.69 |
4080 | 4464 | 7.595819 | TTATGGACTCATTGAAACAACCTTT | 57.404 | 32.000 | 0.00 | 0.00 | 34.96 | 3.11 |
4081 | 4465 | 5.514274 | TGGACTCATTGAAACAACCTTTC | 57.486 | 39.130 | 0.00 | 0.00 | 0.00 | 2.62 |
4082 | 4466 | 4.952957 | TGGACTCATTGAAACAACCTTTCA | 59.047 | 37.500 | 0.00 | 0.00 | 36.71 | 2.69 |
4083 | 4467 | 5.598005 | TGGACTCATTGAAACAACCTTTCAT | 59.402 | 36.000 | 0.00 | 0.00 | 38.12 | 2.57 |
4086 | 4470 | 7.495606 | GGACTCATTGAAACAACCTTTCATTTT | 59.504 | 33.333 | 0.00 | 0.00 | 38.12 | 1.82 |
4087 | 4471 | 9.528018 | GACTCATTGAAACAACCTTTCATTTTA | 57.472 | 29.630 | 0.00 | 0.00 | 38.12 | 1.52 |
4089 | 4473 | 9.533253 | CTCATTGAAACAACCTTTCATTTTACT | 57.467 | 29.630 | 0.00 | 0.00 | 38.12 | 2.24 |
4090 | 4474 | 9.883142 | TCATTGAAACAACCTTTCATTTTACTT | 57.117 | 25.926 | 0.00 | 0.00 | 38.12 | 2.24 |
4115 | 4499 | 9.467258 | TTCTCATTTTCTTGCAATTAAACTCAG | 57.533 | 29.630 | 0.00 | 0.00 | 0.00 | 3.35 |
4312 | 4698 | 3.820467 | ACGGCAACTTTGAGATTCATTCA | 59.180 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
4378 | 4765 | 1.153958 | GAAATGCTTCGCTGGTGCC | 60.154 | 57.895 | 0.00 | 0.00 | 35.36 | 5.01 |
4383 | 4770 | 0.322456 | TGCTTCGCTGGTGCCTAATT | 60.322 | 50.000 | 0.00 | 0.00 | 35.36 | 1.40 |
4541 | 4931 | 7.569957 | GCATTTTCTGCCTTCATGTAGTTTTTG | 60.570 | 37.037 | 0.00 | 0.00 | 45.66 | 2.44 |
4573 | 4975 | 5.574891 | TTTGTTTTCTCTTGCAGCACTTA | 57.425 | 34.783 | 0.00 | 0.00 | 0.00 | 2.24 |
4574 | 4976 | 5.772825 | TTGTTTTCTCTTGCAGCACTTAT | 57.227 | 34.783 | 0.00 | 0.00 | 0.00 | 1.73 |
4614 | 5016 | 5.596836 | ACACCACATTGACAGAAATTGTT | 57.403 | 34.783 | 0.00 | 0.00 | 41.05 | 2.83 |
4618 | 5020 | 8.203485 | ACACCACATTGACAGAAATTGTTTATT | 58.797 | 29.630 | 0.00 | 0.00 | 41.05 | 1.40 |
4619 | 5021 | 9.044150 | CACCACATTGACAGAAATTGTTTATTT | 57.956 | 29.630 | 0.00 | 0.00 | 41.05 | 1.40 |
4643 | 5045 | 6.426646 | TTTGTTGCCACCCTTTTTACATAT | 57.573 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
4652 | 5054 | 8.866093 | GCCACCCTTTTTACATATATAAACCAT | 58.134 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
4702 | 5105 | 8.984891 | TTTTATTGCACAACAAAGATATCTGG | 57.015 | 30.769 | 5.86 | 4.58 | 42.86 | 3.86 |
4770 | 5173 | 5.408356 | AGCTTCACATTTTGCATCTTGATC | 58.592 | 37.500 | 0.00 | 0.00 | 0.00 | 2.92 |
4792 | 5195 | 8.611257 | TGATCTTCATTTAGGTTCCTTAAAGGA | 58.389 | 33.333 | 0.00 | 0.00 | 44.10 | 3.36 |
4795 | 5198 | 9.243105 | TCTTCATTTAGGTTCCTTAAAGGATTG | 57.757 | 33.333 | 0.00 | 0.00 | 45.34 | 2.67 |
4796 | 5199 | 9.243105 | CTTCATTTAGGTTCCTTAAAGGATTGA | 57.757 | 33.333 | 0.00 | 0.00 | 45.34 | 2.57 |
4797 | 5200 | 8.807948 | TCATTTAGGTTCCTTAAAGGATTGAG | 57.192 | 34.615 | 0.00 | 0.00 | 45.34 | 3.02 |
4798 | 5201 | 8.390921 | TCATTTAGGTTCCTTAAAGGATTGAGT | 58.609 | 33.333 | 0.00 | 0.00 | 45.34 | 3.41 |
4799 | 5202 | 9.681062 | CATTTAGGTTCCTTAAAGGATTGAGTA | 57.319 | 33.333 | 0.00 | 0.00 | 45.34 | 2.59 |
4832 | 5235 | 6.957631 | TGAATCATCTAGAAACTTAGGGCAA | 58.042 | 36.000 | 0.00 | 0.00 | 0.00 | 4.52 |
4836 | 5239 | 5.483937 | TCATCTAGAAACTTAGGGCAACTCA | 59.516 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4837 | 5240 | 6.156949 | TCATCTAGAAACTTAGGGCAACTCAT | 59.843 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
4843 | 5246 | 2.236395 | ACTTAGGGCAACTCATACGCTT | 59.764 | 45.455 | 0.00 | 0.00 | 0.00 | 4.68 |
4860 | 5263 | 2.932614 | CGCTTACCCTCAAATCAGACAG | 59.067 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4865 | 5268 | 1.159285 | CCTCAAATCAGACAGCGCAA | 58.841 | 50.000 | 11.47 | 0.00 | 0.00 | 4.85 |
4867 | 5270 | 1.532437 | CTCAAATCAGACAGCGCAACA | 59.468 | 47.619 | 11.47 | 0.00 | 0.00 | 3.33 |
4868 | 5271 | 2.153645 | TCAAATCAGACAGCGCAACAT | 58.846 | 42.857 | 11.47 | 0.00 | 0.00 | 2.71 |
4879 | 5282 | 1.885157 | CGCAACATGCCATCCAACT | 59.115 | 52.632 | 0.00 | 0.00 | 41.12 | 3.16 |
4880 | 5283 | 0.457166 | CGCAACATGCCATCCAACTG | 60.457 | 55.000 | 0.00 | 0.00 | 41.12 | 3.16 |
4881 | 5284 | 0.604578 | GCAACATGCCATCCAACTGT | 59.395 | 50.000 | 0.00 | 0.00 | 37.42 | 3.55 |
4882 | 5285 | 1.818060 | GCAACATGCCATCCAACTGTA | 59.182 | 47.619 | 0.00 | 0.00 | 37.42 | 2.74 |
4883 | 5286 | 2.159338 | GCAACATGCCATCCAACTGTAG | 60.159 | 50.000 | 0.00 | 0.00 | 37.42 | 2.74 |
4884 | 5287 | 1.755179 | ACATGCCATCCAACTGTAGC | 58.245 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
4885 | 5288 | 1.004628 | ACATGCCATCCAACTGTAGCA | 59.995 | 47.619 | 0.00 | 0.00 | 34.28 | 3.49 |
4886 | 5289 | 1.674441 | CATGCCATCCAACTGTAGCAG | 59.326 | 52.381 | 0.00 | 0.00 | 37.52 | 4.24 |
4887 | 5290 | 0.677731 | TGCCATCCAACTGTAGCAGC | 60.678 | 55.000 | 0.00 | 0.00 | 34.37 | 5.25 |
4888 | 5291 | 0.677731 | GCCATCCAACTGTAGCAGCA | 60.678 | 55.000 | 0.00 | 0.00 | 34.37 | 4.41 |
4889 | 5292 | 1.825090 | CCATCCAACTGTAGCAGCAA | 58.175 | 50.000 | 0.00 | 0.00 | 34.37 | 3.91 |
4918 | 5321 | 9.573133 | GTCTGGTTACATTTCTAATGGAATTTG | 57.427 | 33.333 | 0.76 | 0.00 | 37.87 | 2.32 |
4931 | 5334 | 9.241919 | TCTAATGGAATTTGACAAAGATAAGCA | 57.758 | 29.630 | 6.77 | 0.00 | 37.87 | 3.91 |
5036 | 5446 | 7.475137 | TGAATTAAACCCTATTCAACCTTGG | 57.525 | 36.000 | 0.00 | 0.00 | 37.71 | 3.61 |
5037 | 5447 | 7.242359 | TGAATTAAACCCTATTCAACCTTGGA | 58.758 | 34.615 | 0.00 | 0.00 | 37.71 | 3.53 |
5038 | 5448 | 7.898636 | TGAATTAAACCCTATTCAACCTTGGAT | 59.101 | 33.333 | 0.00 | 0.00 | 37.71 | 3.41 |
5039 | 5449 | 8.679344 | AATTAAACCCTATTCAACCTTGGATT | 57.321 | 30.769 | 0.00 | 0.00 | 0.00 | 3.01 |
5040 | 5450 | 8.679344 | ATTAAACCCTATTCAACCTTGGATTT | 57.321 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
5041 | 5451 | 8.499288 | TTAAACCCTATTCAACCTTGGATTTT | 57.501 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
5042 | 5452 | 7.387265 | AAACCCTATTCAACCTTGGATTTTT | 57.613 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
5043 | 5453 | 6.358974 | ACCCTATTCAACCTTGGATTTTTG | 57.641 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
5044 | 5454 | 5.248248 | ACCCTATTCAACCTTGGATTTTTGG | 59.752 | 40.000 | 0.00 | 0.00 | 0.00 | 3.28 |
5045 | 5455 | 5.178061 | CCTATTCAACCTTGGATTTTTGGC | 58.822 | 41.667 | 0.00 | 0.00 | 0.00 | 4.52 |
5046 | 5456 | 4.703379 | ATTCAACCTTGGATTTTTGGCA | 57.297 | 36.364 | 0.00 | 0.00 | 0.00 | 4.92 |
5047 | 5457 | 3.467374 | TCAACCTTGGATTTTTGGCAC | 57.533 | 42.857 | 0.00 | 0.00 | 0.00 | 5.01 |
5048 | 5458 | 2.103941 | TCAACCTTGGATTTTTGGCACC | 59.896 | 45.455 | 0.00 | 0.00 | 0.00 | 5.01 |
5049 | 5459 | 1.055849 | ACCTTGGATTTTTGGCACCC | 58.944 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
5050 | 5460 | 1.055040 | CCTTGGATTTTTGGCACCCA | 58.945 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
5051 | 5461 | 1.419387 | CCTTGGATTTTTGGCACCCAA | 59.581 | 47.619 | 0.00 | 0.00 | 42.29 | 4.12 |
5052 | 5462 | 2.769893 | CTTGGATTTTTGGCACCCAAG | 58.230 | 47.619 | 13.57 | 13.57 | 44.84 | 3.61 |
5053 | 5463 | 0.396060 | TGGATTTTTGGCACCCAAGC | 59.604 | 50.000 | 0.00 | 0.00 | 44.84 | 4.01 |
5054 | 5464 | 0.396060 | GGATTTTTGGCACCCAAGCA | 59.604 | 50.000 | 0.00 | 0.00 | 44.84 | 3.91 |
5055 | 5465 | 1.511850 | GATTTTTGGCACCCAAGCAC | 58.488 | 50.000 | 0.00 | 0.00 | 44.84 | 4.40 |
5056 | 5466 | 0.108396 | ATTTTTGGCACCCAAGCACC | 59.892 | 50.000 | 0.00 | 0.00 | 44.84 | 5.01 |
5057 | 5467 | 2.303549 | TTTTTGGCACCCAAGCACCG | 62.304 | 55.000 | 0.00 | 0.00 | 44.84 | 4.94 |
5070 | 5480 | 4.802051 | CACCGGTGGCCTCCCATG | 62.802 | 72.222 | 27.57 | 12.29 | 44.51 | 3.66 |
5073 | 5483 | 4.864334 | CGGTGGCCTCCCATGCTC | 62.864 | 72.222 | 18.19 | 0.00 | 44.51 | 4.26 |
5074 | 5484 | 3.415087 | GGTGGCCTCCCATGCTCT | 61.415 | 66.667 | 13.20 | 0.00 | 44.51 | 4.09 |
5075 | 5485 | 2.124403 | GTGGCCTCCCATGCTCTG | 60.124 | 66.667 | 3.32 | 0.00 | 44.51 | 3.35 |
5076 | 5486 | 4.119363 | TGGCCTCCCATGCTCTGC | 62.119 | 66.667 | 3.32 | 0.00 | 35.79 | 4.26 |
5077 | 5487 | 3.806667 | GGCCTCCCATGCTCTGCT | 61.807 | 66.667 | 0.00 | 0.00 | 0.00 | 4.24 |
5078 | 5488 | 2.203181 | GCCTCCCATGCTCTGCTC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
5079 | 5489 | 2.744243 | GCCTCCCATGCTCTGCTCT | 61.744 | 63.158 | 0.00 | 0.00 | 0.00 | 4.09 |
5080 | 5490 | 1.913722 | CCTCCCATGCTCTGCTCTT | 59.086 | 57.895 | 0.00 | 0.00 | 0.00 | 2.85 |
5081 | 5491 | 0.179051 | CCTCCCATGCTCTGCTCTTC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 2.87 |
5082 | 5492 | 0.179051 | CTCCCATGCTCTGCTCTTCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
5083 | 5493 | 0.619832 | TCCCATGCTCTGCTCTTCCT | 60.620 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
5084 | 5494 | 0.179051 | CCCATGCTCTGCTCTTCCTC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
5085 | 5495 | 0.530211 | CCATGCTCTGCTCTTCCTCG | 60.530 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
5086 | 5496 | 1.143620 | ATGCTCTGCTCTTCCTCGC | 59.856 | 57.895 | 0.00 | 0.00 | 0.00 | 5.03 |
5087 | 5497 | 2.202864 | GCTCTGCTCTTCCTCGCC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
5088 | 5498 | 2.103934 | CTCTGCTCTTCCTCGCCG | 59.896 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
5089 | 5499 | 4.135153 | TCTGCTCTTCCTCGCCGC | 62.135 | 66.667 | 0.00 | 0.00 | 0.00 | 6.53 |
5130 | 5540 | 4.719369 | GCTTCCTCGTCGTGCCGT | 62.719 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
5131 | 5541 | 2.504244 | CTTCCTCGTCGTGCCGTC | 60.504 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
5132 | 5542 | 4.394078 | TTCCTCGTCGTGCCGTCG | 62.394 | 66.667 | 7.61 | 7.61 | 39.38 | 5.12 |
5164 | 5574 | 4.230603 | CGGAGCTGGCAATGTCAT | 57.769 | 55.556 | 0.00 | 0.00 | 0.00 | 3.06 |
5165 | 5575 | 3.384816 | CGGAGCTGGCAATGTCATA | 57.615 | 52.632 | 0.00 | 0.00 | 0.00 | 2.15 |
5166 | 5576 | 1.888215 | CGGAGCTGGCAATGTCATAT | 58.112 | 50.000 | 0.00 | 0.00 | 0.00 | 1.78 |
5167 | 5577 | 1.534163 | CGGAGCTGGCAATGTCATATG | 59.466 | 52.381 | 0.00 | 0.00 | 0.00 | 1.78 |
5168 | 5578 | 2.579873 | GGAGCTGGCAATGTCATATGT | 58.420 | 47.619 | 1.90 | 0.00 | 0.00 | 2.29 |
5169 | 5579 | 2.292569 | GGAGCTGGCAATGTCATATGTG | 59.707 | 50.000 | 1.90 | 0.00 | 0.00 | 3.21 |
5170 | 5580 | 1.679680 | AGCTGGCAATGTCATATGTGC | 59.320 | 47.619 | 1.90 | 5.07 | 36.24 | 4.57 |
5176 | 5586 | 3.480470 | GCAATGTCATATGTGCCCTAGT | 58.520 | 45.455 | 1.90 | 0.00 | 0.00 | 2.57 |
5177 | 5587 | 3.499918 | GCAATGTCATATGTGCCCTAGTC | 59.500 | 47.826 | 1.90 | 0.00 | 0.00 | 2.59 |
5178 | 5588 | 4.707105 | CAATGTCATATGTGCCCTAGTCA | 58.293 | 43.478 | 1.90 | 0.00 | 0.00 | 3.41 |
5179 | 5589 | 5.125356 | CAATGTCATATGTGCCCTAGTCAA | 58.875 | 41.667 | 1.90 | 0.00 | 0.00 | 3.18 |
5180 | 5590 | 4.835284 | TGTCATATGTGCCCTAGTCAAA | 57.165 | 40.909 | 1.90 | 0.00 | 0.00 | 2.69 |
5181 | 5591 | 5.372343 | TGTCATATGTGCCCTAGTCAAAT | 57.628 | 39.130 | 1.90 | 0.00 | 0.00 | 2.32 |
5182 | 5592 | 5.754782 | TGTCATATGTGCCCTAGTCAAATT | 58.245 | 37.500 | 1.90 | 0.00 | 0.00 | 1.82 |
5183 | 5593 | 6.894682 | TGTCATATGTGCCCTAGTCAAATTA | 58.105 | 36.000 | 1.90 | 0.00 | 0.00 | 1.40 |
5184 | 5594 | 6.765989 | TGTCATATGTGCCCTAGTCAAATTAC | 59.234 | 38.462 | 1.90 | 0.00 | 0.00 | 1.89 |
5185 | 5595 | 5.989168 | TCATATGTGCCCTAGTCAAATTACG | 59.011 | 40.000 | 1.90 | 0.00 | 0.00 | 3.18 |
5186 | 5596 | 3.688694 | TGTGCCCTAGTCAAATTACGT | 57.311 | 42.857 | 0.00 | 0.00 | 0.00 | 3.57 |
5187 | 5597 | 3.592059 | TGTGCCCTAGTCAAATTACGTC | 58.408 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
5188 | 5598 | 2.601763 | GTGCCCTAGTCAAATTACGTCG | 59.398 | 50.000 | 0.00 | 0.00 | 0.00 | 5.12 |
5189 | 5599 | 1.591619 | GCCCTAGTCAAATTACGTCGC | 59.408 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
5190 | 5600 | 2.199236 | CCCTAGTCAAATTACGTCGCC | 58.801 | 52.381 | 0.00 | 0.00 | 0.00 | 5.54 |
5191 | 5601 | 1.850441 | CCTAGTCAAATTACGTCGCCG | 59.150 | 52.381 | 0.00 | 0.00 | 40.83 | 6.46 |
5192 | 5602 | 1.254570 | CTAGTCAAATTACGTCGCCGC | 59.745 | 52.381 | 0.00 | 0.00 | 37.70 | 6.53 |
5193 | 5603 | 0.389426 | AGTCAAATTACGTCGCCGCT | 60.389 | 50.000 | 0.00 | 0.00 | 37.70 | 5.52 |
5194 | 5604 | 0.441145 | GTCAAATTACGTCGCCGCTT | 59.559 | 50.000 | 0.00 | 0.00 | 37.70 | 4.68 |
5195 | 5605 | 0.717224 | TCAAATTACGTCGCCGCTTC | 59.283 | 50.000 | 0.00 | 0.00 | 37.70 | 3.86 |
5196 | 5606 | 0.583083 | CAAATTACGTCGCCGCTTCG | 60.583 | 55.000 | 0.00 | 3.22 | 37.70 | 3.79 |
5197 | 5607 | 1.010419 | AAATTACGTCGCCGCTTCGT | 61.010 | 50.000 | 12.69 | 12.69 | 40.78 | 3.85 |
5198 | 5608 | 1.010419 | AATTACGTCGCCGCTTCGTT | 61.010 | 50.000 | 13.18 | 0.00 | 38.69 | 3.85 |
5199 | 5609 | 1.680105 | ATTACGTCGCCGCTTCGTTG | 61.680 | 55.000 | 13.18 | 0.00 | 38.69 | 4.10 |
5200 | 5610 | 2.730006 | TTACGTCGCCGCTTCGTTGA | 62.730 | 55.000 | 13.18 | 3.21 | 38.69 | 3.18 |
5201 | 5611 | 2.531927 | TACGTCGCCGCTTCGTTGAT | 62.532 | 55.000 | 13.18 | 0.00 | 38.69 | 2.57 |
5202 | 5612 | 2.695646 | GTCGCCGCTTCGTTGATC | 59.304 | 61.111 | 0.00 | 0.00 | 0.00 | 2.92 |
5203 | 5613 | 1.805945 | GTCGCCGCTTCGTTGATCT | 60.806 | 57.895 | 0.00 | 0.00 | 0.00 | 2.75 |
5204 | 5614 | 1.080093 | TCGCCGCTTCGTTGATCTT | 60.080 | 52.632 | 0.00 | 0.00 | 0.00 | 2.40 |
5205 | 5615 | 1.076533 | TCGCCGCTTCGTTGATCTTC | 61.077 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
5206 | 5616 | 1.345176 | GCCGCTTCGTTGATCTTCG | 59.655 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
5207 | 5617 | 1.345176 | CCGCTTCGTTGATCTTCGC | 59.655 | 57.895 | 0.00 | 0.00 | 0.00 | 4.70 |
5208 | 5618 | 1.345176 | CGCTTCGTTGATCTTCGCC | 59.655 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
5209 | 5619 | 1.351430 | CGCTTCGTTGATCTTCGCCA | 61.351 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
5210 | 5620 | 0.796312 | GCTTCGTTGATCTTCGCCAA | 59.204 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
5211 | 5621 | 1.201965 | GCTTCGTTGATCTTCGCCAAG | 60.202 | 52.381 | 0.00 | 1.61 | 0.00 | 3.61 |
5212 | 5622 | 2.337583 | CTTCGTTGATCTTCGCCAAGA | 58.662 | 47.619 | 0.00 | 0.00 | 43.06 | 3.02 |
5213 | 5623 | 1.710013 | TCGTTGATCTTCGCCAAGAC | 58.290 | 50.000 | 0.00 | 0.00 | 41.64 | 3.01 |
5214 | 5624 | 1.000394 | TCGTTGATCTTCGCCAAGACA | 60.000 | 47.619 | 0.00 | 0.00 | 41.64 | 3.41 |
5215 | 5625 | 1.391485 | CGTTGATCTTCGCCAAGACAG | 59.609 | 52.381 | 0.00 | 0.00 | 41.64 | 3.51 |
5216 | 5626 | 1.129437 | GTTGATCTTCGCCAAGACAGC | 59.871 | 52.381 | 0.00 | 0.00 | 41.64 | 4.40 |
5217 | 5627 | 0.610174 | TGATCTTCGCCAAGACAGCT | 59.390 | 50.000 | 0.00 | 0.00 | 41.64 | 4.24 |
5218 | 5628 | 1.002430 | TGATCTTCGCCAAGACAGCTT | 59.998 | 47.619 | 0.00 | 0.00 | 41.64 | 3.74 |
5219 | 5629 | 1.663135 | GATCTTCGCCAAGACAGCTTC | 59.337 | 52.381 | 0.00 | 0.00 | 41.64 | 3.86 |
5220 | 5630 | 0.681733 | TCTTCGCCAAGACAGCTTCT | 59.318 | 50.000 | 0.00 | 0.00 | 33.38 | 2.85 |
5221 | 5631 | 1.070758 | TCTTCGCCAAGACAGCTTCTT | 59.929 | 47.619 | 5.61 | 5.61 | 46.29 | 2.52 |
5222 | 5632 | 1.876156 | CTTCGCCAAGACAGCTTCTTT | 59.124 | 47.619 | 8.01 | 0.00 | 42.37 | 2.52 |
5223 | 5633 | 1.967319 | TCGCCAAGACAGCTTCTTTT | 58.033 | 45.000 | 8.01 | 0.00 | 42.37 | 2.27 |
5224 | 5634 | 2.297701 | TCGCCAAGACAGCTTCTTTTT | 58.702 | 42.857 | 8.01 | 0.00 | 42.37 | 1.94 |
5256 | 5666 | 1.275066 | GCGCTAGCATCAAAGCTCG | 59.725 | 57.895 | 16.45 | 0.00 | 45.26 | 5.03 |
5257 | 5667 | 1.275066 | CGCTAGCATCAAAGCTCGC | 59.725 | 57.895 | 16.45 | 2.78 | 46.32 | 5.03 |
5258 | 5668 | 1.275066 | GCTAGCATCAAAGCTCGCG | 59.725 | 57.895 | 10.63 | 0.00 | 45.26 | 5.87 |
5259 | 5669 | 1.148157 | GCTAGCATCAAAGCTCGCGA | 61.148 | 55.000 | 9.26 | 9.26 | 45.26 | 5.87 |
5260 | 5670 | 0.574454 | CTAGCATCAAAGCTCGCGAC | 59.426 | 55.000 | 3.71 | 2.10 | 45.26 | 5.19 |
5261 | 5671 | 1.139816 | TAGCATCAAAGCTCGCGACG | 61.140 | 55.000 | 3.71 | 2.50 | 45.26 | 5.12 |
5262 | 5672 | 2.697425 | CATCAAAGCTCGCGACGG | 59.303 | 61.111 | 3.71 | 0.00 | 0.00 | 4.79 |
5263 | 5673 | 1.805539 | CATCAAAGCTCGCGACGGA | 60.806 | 57.895 | 3.71 | 4.21 | 0.00 | 4.69 |
5264 | 5674 | 1.141881 | ATCAAAGCTCGCGACGGAT | 59.858 | 52.632 | 3.71 | 6.27 | 0.00 | 4.18 |
5265 | 5675 | 1.148157 | ATCAAAGCTCGCGACGGATG | 61.148 | 55.000 | 3.71 | 2.52 | 0.00 | 3.51 |
5266 | 5676 | 2.094659 | CAAAGCTCGCGACGGATGT | 61.095 | 57.895 | 3.71 | 0.00 | 0.00 | 3.06 |
5267 | 5677 | 1.805945 | AAAGCTCGCGACGGATGTC | 60.806 | 57.895 | 3.71 | 0.00 | 41.91 | 3.06 |
5282 | 5692 | 2.890474 | GTCGTGGGCGGCATGTAG | 60.890 | 66.667 | 12.47 | 0.00 | 43.09 | 2.74 |
5283 | 5693 | 3.387091 | TCGTGGGCGGCATGTAGT | 61.387 | 61.111 | 12.47 | 0.00 | 38.89 | 2.73 |
5284 | 5694 | 2.053277 | TCGTGGGCGGCATGTAGTA | 61.053 | 57.895 | 12.47 | 0.00 | 38.89 | 1.82 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
198 | 199 | 1.177401 | GGTCCGTACGTCCTTACCTT | 58.823 | 55.000 | 15.21 | 0.00 | 0.00 | 3.50 |
214 | 215 | 0.678048 | GGTGCAGGGAGAATGTGGTC | 60.678 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
248 | 249 | 7.094762 | GCAAGTTAGGCTTACACTGAAATTACT | 60.095 | 37.037 | 6.41 | 0.00 | 35.27 | 2.24 |
255 | 256 | 5.677319 | ATAGCAAGTTAGGCTTACACTGA | 57.323 | 39.130 | 6.41 | 0.00 | 42.62 | 3.41 |
365 | 366 | 8.408601 | GTTCATGATTCCTGCAGTAATTATTGT | 58.591 | 33.333 | 13.81 | 0.00 | 0.00 | 2.71 |
530 | 534 | 0.700564 | TCCAAGGAAATCAGCTGGCT | 59.299 | 50.000 | 15.13 | 0.00 | 0.00 | 4.75 |
554 | 558 | 1.588932 | CTTTAGGCGATCGCTGCGA | 60.589 | 57.895 | 36.25 | 28.01 | 41.13 | 5.10 |
676 | 680 | 5.397899 | CCAGATTTCATAGCCCACCTAAAGA | 60.398 | 44.000 | 0.00 | 0.00 | 0.00 | 2.52 |
874 | 878 | 4.426313 | GCGGGTTCTGGAAGGGGG | 62.426 | 72.222 | 0.00 | 0.00 | 0.00 | 5.40 |
879 | 883 | 3.327404 | GGGAGGCGGGTTCTGGAA | 61.327 | 66.667 | 0.00 | 0.00 | 0.00 | 3.53 |
883 | 887 | 2.685380 | CAGAGGGAGGCGGGTTCT | 60.685 | 66.667 | 0.00 | 0.00 | 0.00 | 3.01 |
884 | 888 | 2.683933 | TCAGAGGGAGGCGGGTTC | 60.684 | 66.667 | 0.00 | 0.00 | 0.00 | 3.62 |
885 | 889 | 3.003763 | GTCAGAGGGAGGCGGGTT | 61.004 | 66.667 | 0.00 | 0.00 | 0.00 | 4.11 |
893 | 911 | 2.637640 | GGGGGAGAGGTCAGAGGGA | 61.638 | 68.421 | 0.00 | 0.00 | 0.00 | 4.20 |
894 | 912 | 2.041405 | GGGGGAGAGGTCAGAGGG | 60.041 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
989 | 1009 | 4.809496 | CCTCCATGCTTGGCCGCT | 62.809 | 66.667 | 13.75 | 0.00 | 43.29 | 5.52 |
1316 | 1339 | 2.168496 | GGGGAGTTAAAAGAGTTGGGC | 58.832 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
1325 | 1348 | 1.047002 | TCGTGTCGGGGGAGTTAAAA | 58.953 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
1326 | 1349 | 0.318120 | GTCGTGTCGGGGGAGTTAAA | 59.682 | 55.000 | 0.00 | 0.00 | 0.00 | 1.52 |
1343 | 1366 | 4.324991 | GGGTGGGTGGGTGTCGTC | 62.325 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
1372 | 1395 | 0.104855 | CAGATCAAATCGAGCGGGGA | 59.895 | 55.000 | 0.00 | 0.00 | 34.30 | 4.81 |
1374 | 1397 | 0.531532 | AGCAGATCAAATCGAGCGGG | 60.532 | 55.000 | 0.00 | 0.00 | 39.22 | 6.13 |
1448 | 1477 | 0.248661 | CAGCATCTACCGACTGACCG | 60.249 | 60.000 | 0.00 | 0.00 | 31.67 | 4.79 |
1477 | 1509 | 3.005261 | CCCACGAATATCTGGAGTCTCTG | 59.995 | 52.174 | 0.00 | 0.00 | 0.00 | 3.35 |
1550 | 1666 | 1.450134 | TAGCTGCGGCCATGAACTG | 60.450 | 57.895 | 15.55 | 0.00 | 39.73 | 3.16 |
1564 | 1680 | 2.242196 | AGAGAGAGAAGAGGCAGTAGCT | 59.758 | 50.000 | 0.00 | 0.00 | 41.70 | 3.32 |
1579 | 1696 | 7.792364 | TTCAGAGGGTAAACAATTAGAGAGA | 57.208 | 36.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1580 | 1697 | 9.103861 | GAATTCAGAGGGTAAACAATTAGAGAG | 57.896 | 37.037 | 0.00 | 0.00 | 0.00 | 3.20 |
1633 | 1750 | 1.847890 | AAATGCGTTTGTCCGGACCG | 61.848 | 55.000 | 31.19 | 26.37 | 0.00 | 4.79 |
1665 | 1782 | 7.862675 | AGGTATTAATCCTGCAGTAGAAAAGT | 58.137 | 34.615 | 13.81 | 0.00 | 33.62 | 2.66 |
1747 | 1866 | 4.327357 | CAGTGAACCTACTATGCAAGAACG | 59.673 | 45.833 | 0.00 | 0.00 | 0.00 | 3.95 |
1784 | 1907 | 4.536489 | AGCTCCTAGTTGGATACTTGGTTT | 59.464 | 41.667 | 0.00 | 0.00 | 46.20 | 3.27 |
1809 | 1936 | 5.578336 | TCATTTGCTCGTCTGTCAAATCTAG | 59.422 | 40.000 | 0.00 | 0.00 | 38.07 | 2.43 |
1830 | 1957 | 4.657504 | TCTTCACAGCCATCCTATCTTCAT | 59.342 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
1881 | 2008 | 7.487822 | AGAGAAAGTTATGGATTCAGACAGA | 57.512 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1890 | 2017 | 4.591321 | TGGCCAAGAGAAAGTTATGGAT | 57.409 | 40.909 | 0.61 | 0.00 | 32.82 | 3.41 |
1923 | 2057 | 6.048732 | TCACAAGTATGGTCAATCTAGCAA | 57.951 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
1925 | 2059 | 8.144478 | TCTAATCACAAGTATGGTCAATCTAGC | 58.856 | 37.037 | 0.00 | 0.00 | 0.00 | 3.42 |
1971 | 2155 | 2.430332 | ACAAAGCAAGCAACAGCCTAAA | 59.570 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
2004 | 2189 | 5.517322 | ACCTTACAGTCTATCGGATGTTC | 57.483 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
2013 | 2198 | 5.720041 | TGGCTCAAGTAACCTTACAGTCTAT | 59.280 | 40.000 | 0.00 | 0.00 | 36.12 | 1.98 |
2018 | 2203 | 4.273148 | AGTGGCTCAAGTAACCTTACAG | 57.727 | 45.455 | 0.00 | 0.00 | 36.12 | 2.74 |
2021 | 2206 | 5.937111 | AGAAAAGTGGCTCAAGTAACCTTA | 58.063 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
2082 | 2267 | 8.356657 | CACCAAATAATTGACCACTGACTTTTA | 58.643 | 33.333 | 0.00 | 0.00 | 38.94 | 1.52 |
2083 | 2268 | 7.147742 | ACACCAAATAATTGACCACTGACTTTT | 60.148 | 33.333 | 0.00 | 0.00 | 38.94 | 2.27 |
2122 | 2307 | 3.182967 | CTGTCCTTGTCTAAGACGCATC | 58.817 | 50.000 | 0.00 | 0.00 | 35.92 | 3.91 |
2130 | 2315 | 3.042682 | TGTCCAACCTGTCCTTGTCTAA | 58.957 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
2181 | 2367 | 0.896226 | AGTACCAGAACTCTTCCGCC | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2249 | 2435 | 4.682860 | TCGACGGTGTTAAGAAAAGATGAC | 59.317 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
2365 | 2556 | 1.087501 | GAGCACTTCCGCTAAAAGGG | 58.912 | 55.000 | 0.00 | 0.00 | 44.01 | 3.95 |
2371 | 2562 | 0.815734 | GTACCAGAGCACTTCCGCTA | 59.184 | 55.000 | 0.00 | 0.00 | 44.01 | 4.26 |
2380 | 2571 | 3.118038 | ACAAAGTCCAAAGTACCAGAGCA | 60.118 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
2404 | 2595 | 2.196595 | ACTGCAGCTGTTATCCCCTTA | 58.803 | 47.619 | 15.27 | 0.00 | 0.00 | 2.69 |
2405 | 2596 | 0.995024 | ACTGCAGCTGTTATCCCCTT | 59.005 | 50.000 | 15.27 | 0.00 | 0.00 | 3.95 |
2408 | 2599 | 3.313526 | CACATAACTGCAGCTGTTATCCC | 59.686 | 47.826 | 26.57 | 0.00 | 36.72 | 3.85 |
2432 | 2623 | 4.505313 | AGAATAAGACGATATGCAGCGA | 57.495 | 40.909 | 12.47 | 0.00 | 36.93 | 4.93 |
2433 | 2624 | 5.629435 | TGTTAGAATAAGACGATATGCAGCG | 59.371 | 40.000 | 0.00 | 0.00 | 40.09 | 5.18 |
2438 | 2629 | 6.362551 | CGGTGGTGTTAGAATAAGACGATATG | 59.637 | 42.308 | 0.00 | 0.00 | 0.00 | 1.78 |
2439 | 2630 | 6.040166 | ACGGTGGTGTTAGAATAAGACGATAT | 59.960 | 38.462 | 0.00 | 0.00 | 0.00 | 1.63 |
2440 | 2631 | 5.357878 | ACGGTGGTGTTAGAATAAGACGATA | 59.642 | 40.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2441 | 2632 | 4.159135 | ACGGTGGTGTTAGAATAAGACGAT | 59.841 | 41.667 | 0.00 | 0.00 | 0.00 | 3.73 |
2442 | 2633 | 3.507233 | ACGGTGGTGTTAGAATAAGACGA | 59.493 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
2443 | 2634 | 3.611113 | CACGGTGGTGTTAGAATAAGACG | 59.389 | 47.826 | 0.00 | 0.00 | 39.38 | 4.18 |
2444 | 2635 | 3.370061 | GCACGGTGGTGTTAGAATAAGAC | 59.630 | 47.826 | 10.60 | 0.00 | 46.13 | 3.01 |
2445 | 2636 | 3.592059 | GCACGGTGGTGTTAGAATAAGA | 58.408 | 45.455 | 10.60 | 0.00 | 46.13 | 2.10 |
2446 | 2637 | 2.676342 | GGCACGGTGGTGTTAGAATAAG | 59.324 | 50.000 | 10.60 | 0.00 | 46.13 | 1.73 |
2447 | 2638 | 2.303600 | AGGCACGGTGGTGTTAGAATAA | 59.696 | 45.455 | 10.60 | 0.00 | 46.13 | 1.40 |
2449 | 2640 | 0.690762 | AGGCACGGTGGTGTTAGAAT | 59.309 | 50.000 | 10.60 | 0.00 | 46.13 | 2.40 |
2471 | 2663 | 3.428534 | CCACGCTCCATTTTAAAAGCAAC | 59.571 | 43.478 | 6.79 | 0.00 | 34.39 | 4.17 |
2480 | 2672 | 1.678970 | GAGGCCCACGCTCCATTTT | 60.679 | 57.895 | 0.00 | 0.00 | 34.44 | 1.82 |
2493 | 2685 | 6.584185 | TTTGTAGATTTAAAACCAGAGGCC | 57.416 | 37.500 | 0.00 | 0.00 | 0.00 | 5.19 |
2573 | 2767 | 9.236691 | GTCACGAAATGATTAGTAACCGTATAA | 57.763 | 33.333 | 0.00 | 0.00 | 40.28 | 0.98 |
2579 | 2773 | 6.963049 | ACAGTCACGAAATGATTAGTAACC | 57.037 | 37.500 | 0.00 | 0.00 | 40.28 | 2.85 |
2619 | 2816 | 5.413833 | AGACCAAAATGATGTAAGTCAGCTG | 59.586 | 40.000 | 7.63 | 7.63 | 33.14 | 4.24 |
2633 | 2830 | 7.940850 | TCTTTACAGAAAAGGAGACCAAAATG | 58.059 | 34.615 | 0.00 | 0.00 | 44.10 | 2.32 |
2763 | 2966 | 3.117701 | TGAGCTGCACTCTACTCTCCTAT | 60.118 | 47.826 | 14.60 | 0.00 | 46.41 | 2.57 |
2862 | 3065 | 7.070571 | TGGAAAAGGTATCTTGGTTGAATGTTT | 59.929 | 33.333 | 0.00 | 0.00 | 32.75 | 2.83 |
2863 | 3066 | 6.553100 | TGGAAAAGGTATCTTGGTTGAATGTT | 59.447 | 34.615 | 0.00 | 0.00 | 32.75 | 2.71 |
2870 | 3073 | 7.797121 | ATCAAATGGAAAAGGTATCTTGGTT | 57.203 | 32.000 | 0.00 | 0.00 | 32.75 | 3.67 |
2922 | 3126 | 3.006247 | GGACAGGACAAGCTTCAAGATC | 58.994 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2928 | 3132 | 1.004440 | AGCGGACAGGACAAGCTTC | 60.004 | 57.895 | 0.00 | 0.00 | 34.05 | 3.86 |
2934 | 3138 | 1.621317 | TGTTAATGAGCGGACAGGACA | 59.379 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
2937 | 3141 | 2.905075 | TCATGTTAATGAGCGGACAGG | 58.095 | 47.619 | 0.00 | 0.00 | 37.91 | 4.00 |
2943 | 3147 | 7.576236 | CCCTAAAGTAATCATGTTAATGAGCG | 58.424 | 38.462 | 0.00 | 0.00 | 45.88 | 5.03 |
2944 | 3148 | 7.013274 | TGCCCTAAAGTAATCATGTTAATGAGC | 59.987 | 37.037 | 0.00 | 0.00 | 45.88 | 4.26 |
3005 | 3210 | 4.402474 | AGCAGCAAGTTAATTATTCCACCC | 59.598 | 41.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3023 | 3228 | 2.998316 | ATCAAAGGACTAGGAGCAGC | 57.002 | 50.000 | 0.00 | 0.00 | 0.00 | 5.25 |
3036 | 3241 | 6.818644 | TGTAGCTACAGCCTTTCTTATCAAAG | 59.181 | 38.462 | 22.67 | 0.00 | 43.38 | 2.77 |
3057 | 3262 | 5.106948 | CGCAAGCTTAACATGGGATATGTAG | 60.107 | 44.000 | 0.00 | 0.00 | 32.09 | 2.74 |
3059 | 3264 | 3.565482 | CGCAAGCTTAACATGGGATATGT | 59.435 | 43.478 | 0.00 | 0.00 | 32.09 | 2.29 |
3068 | 3273 | 6.458751 | CCAAGTAATCATCGCAAGCTTAACAT | 60.459 | 38.462 | 0.00 | 0.00 | 37.18 | 2.71 |
3078 | 3283 | 4.571984 | CACTGAATCCAAGTAATCATCGCA | 59.428 | 41.667 | 0.00 | 0.00 | 0.00 | 5.10 |
3112 | 3319 | 8.275040 | AGGCTTACTTCCACTGTATCAATTAAT | 58.725 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3118 | 3325 | 4.081642 | GTCAGGCTTACTTCCACTGTATCA | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 2.15 |
3150 | 3357 | 4.765273 | TGCCAATGACTGATATTGTACGT | 58.235 | 39.130 | 0.00 | 0.00 | 34.51 | 3.57 |
3226 | 3434 | 9.823647 | CACCTACATATGTTTCTCTATCAAACT | 57.176 | 33.333 | 14.77 | 0.00 | 35.19 | 2.66 |
3227 | 3435 | 9.817809 | TCACCTACATATGTTTCTCTATCAAAC | 57.182 | 33.333 | 14.77 | 0.00 | 34.79 | 2.93 |
3229 | 3437 | 9.987272 | CATCACCTACATATGTTTCTCTATCAA | 57.013 | 33.333 | 14.77 | 0.00 | 0.00 | 2.57 |
3230 | 3438 | 8.090831 | GCATCACCTACATATGTTTCTCTATCA | 58.909 | 37.037 | 14.77 | 0.00 | 0.00 | 2.15 |
3231 | 3439 | 8.090831 | TGCATCACCTACATATGTTTCTCTATC | 58.909 | 37.037 | 14.77 | 0.00 | 0.00 | 2.08 |
3232 | 3440 | 7.966812 | TGCATCACCTACATATGTTTCTCTAT | 58.033 | 34.615 | 14.77 | 0.00 | 0.00 | 1.98 |
3233 | 3441 | 7.360113 | TGCATCACCTACATATGTTTCTCTA | 57.640 | 36.000 | 14.77 | 0.00 | 0.00 | 2.43 |
3234 | 3442 | 6.239217 | TGCATCACCTACATATGTTTCTCT | 57.761 | 37.500 | 14.77 | 0.00 | 0.00 | 3.10 |
3235 | 3443 | 7.502120 | AATGCATCACCTACATATGTTTCTC | 57.498 | 36.000 | 14.77 | 0.00 | 0.00 | 2.87 |
3236 | 3444 | 7.013655 | GGAAATGCATCACCTACATATGTTTCT | 59.986 | 37.037 | 14.77 | 0.00 | 0.00 | 2.52 |
3237 | 3445 | 7.141363 | GGAAATGCATCACCTACATATGTTTC | 58.859 | 38.462 | 14.77 | 6.79 | 0.00 | 2.78 |
3238 | 3446 | 6.040842 | GGGAAATGCATCACCTACATATGTTT | 59.959 | 38.462 | 14.77 | 0.00 | 0.00 | 2.83 |
3239 | 3447 | 5.536161 | GGGAAATGCATCACCTACATATGTT | 59.464 | 40.000 | 14.77 | 0.00 | 0.00 | 2.71 |
3240 | 3448 | 5.072741 | GGGAAATGCATCACCTACATATGT | 58.927 | 41.667 | 13.93 | 13.93 | 0.00 | 2.29 |
3241 | 3449 | 4.460382 | GGGGAAATGCATCACCTACATATG | 59.540 | 45.833 | 17.59 | 0.00 | 39.96 | 1.78 |
3242 | 3450 | 4.666512 | GGGGAAATGCATCACCTACATAT | 58.333 | 43.478 | 17.59 | 0.00 | 39.96 | 1.78 |
3243 | 3451 | 4.098914 | GGGGAAATGCATCACCTACATA | 57.901 | 45.455 | 17.59 | 0.00 | 39.96 | 2.29 |
3244 | 3452 | 2.949447 | GGGGAAATGCATCACCTACAT | 58.051 | 47.619 | 17.59 | 0.00 | 39.96 | 2.29 |
3245 | 3453 | 2.435372 | GGGGAAATGCATCACCTACA | 57.565 | 50.000 | 17.59 | 0.00 | 39.96 | 2.74 |
3249 | 3457 | 2.689983 | CTGTAAGGGGAAATGCATCACC | 59.310 | 50.000 | 0.00 | 0.00 | 43.70 | 4.02 |
3250 | 3458 | 3.356290 | ACTGTAAGGGGAAATGCATCAC | 58.644 | 45.455 | 0.00 | 0.00 | 39.30 | 3.06 |
3318 | 3529 | 2.161855 | TCACCTGGTGCATAAAAGCTG | 58.838 | 47.619 | 22.02 | 0.00 | 32.98 | 4.24 |
3359 | 3570 | 7.897575 | AGTAAATTTTAATCGCAAATTGGCA | 57.102 | 28.000 | 5.49 | 0.00 | 34.68 | 4.92 |
3365 | 3576 | 9.535878 | ACAAGGAAAGTAAATTTTAATCGCAAA | 57.464 | 25.926 | 0.00 | 0.00 | 0.00 | 3.68 |
3393 | 3604 | 9.312904 | TCCAATTGAAACAAATAGAGAGGAATT | 57.687 | 29.630 | 7.12 | 0.00 | 0.00 | 2.17 |
3446 | 3658 | 5.290493 | AGTTTGTGAGGACAAGTACATGA | 57.710 | 39.130 | 4.87 | 0.00 | 43.03 | 3.07 |
3476 | 3692 | 8.883731 | CGTGTTCTTGATAAGATGGTATTTCTT | 58.116 | 33.333 | 0.00 | 0.00 | 37.38 | 2.52 |
3502 | 3718 | 3.019564 | AGGCATGATAAAAGCTGGTCAC | 58.980 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
3513 | 3729 | 8.644374 | ACAAACTAAAAGGTAAGGCATGATAA | 57.356 | 30.769 | 0.00 | 0.00 | 0.00 | 1.75 |
3516 | 3732 | 6.969993 | AACAAACTAAAAGGTAAGGCATGA | 57.030 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
3533 | 3749 | 8.616076 | CCATCATTCTGGTTCTCTATAACAAAC | 58.384 | 37.037 | 0.00 | 0.00 | 0.00 | 2.93 |
3535 | 3751 | 6.767902 | GCCATCATTCTGGTTCTCTATAACAA | 59.232 | 38.462 | 0.00 | 0.00 | 38.63 | 2.83 |
3536 | 3752 | 6.100279 | AGCCATCATTCTGGTTCTCTATAACA | 59.900 | 38.462 | 0.00 | 0.00 | 38.63 | 2.41 |
3537 | 3753 | 6.529220 | AGCCATCATTCTGGTTCTCTATAAC | 58.471 | 40.000 | 0.00 | 0.00 | 38.63 | 1.89 |
3539 | 3755 | 5.047731 | CGAGCCATCATTCTGGTTCTCTATA | 60.048 | 44.000 | 5.60 | 0.00 | 42.53 | 1.31 |
3540 | 3756 | 4.262377 | CGAGCCATCATTCTGGTTCTCTAT | 60.262 | 45.833 | 5.60 | 0.00 | 42.53 | 1.98 |
3541 | 3757 | 3.068732 | CGAGCCATCATTCTGGTTCTCTA | 59.931 | 47.826 | 5.60 | 0.00 | 42.53 | 2.43 |
3548 | 3923 | 4.887748 | AGTATAACGAGCCATCATTCTGG | 58.112 | 43.478 | 0.00 | 0.00 | 39.45 | 3.86 |
3563 | 3938 | 8.230486 | CCAAACACAATGTCAGAAGAGTATAAC | 58.770 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
3568 | 3943 | 4.336433 | CACCAAACACAATGTCAGAAGAGT | 59.664 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
3574 | 3949 | 2.286950 | CCGTCACCAAACACAATGTCAG | 60.287 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3600 | 3975 | 6.075572 | CGCAAAACTTTTAGTAGCTGAAACAC | 60.076 | 38.462 | 0.00 | 0.00 | 0.00 | 3.32 |
3624 | 3999 | 7.537306 | AGTTCAATTATCAAATCCAACGAAACG | 59.463 | 33.333 | 0.00 | 0.00 | 0.00 | 3.60 |
3627 | 4002 | 9.226606 | AGTAGTTCAATTATCAAATCCAACGAA | 57.773 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
3669 | 4044 | 8.786826 | TTTTACTATGTGGGTATCTTCAAGTG | 57.213 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
3705 | 4080 | 7.872163 | TCTGTATTTGATGTTTCACATTTGC | 57.128 | 32.000 | 0.00 | 0.00 | 39.27 | 3.68 |
3718 | 4093 | 7.410174 | TCCACCTGGTAATTTCTGTATTTGAT | 58.590 | 34.615 | 0.00 | 0.00 | 36.34 | 2.57 |
3862 | 4237 | 6.723977 | AGAAGAGAACATATACCTCTCCATCC | 59.276 | 42.308 | 0.00 | 0.00 | 36.98 | 3.51 |
3989 | 4364 | 5.704888 | CTCTCCATGAGTCGATGTATTACC | 58.295 | 45.833 | 0.00 | 0.00 | 37.99 | 2.85 |
4017 | 4392 | 3.329929 | AATTGGTACAGAGGGTTCGAC | 57.670 | 47.619 | 0.00 | 0.00 | 42.39 | 4.20 |
4018 | 4393 | 4.360951 | AAAATTGGTACAGAGGGTTCGA | 57.639 | 40.909 | 0.00 | 0.00 | 42.39 | 3.71 |
4019 | 4394 | 6.753107 | AATAAAATTGGTACAGAGGGTTCG | 57.247 | 37.500 | 0.00 | 0.00 | 42.39 | 3.95 |
4026 | 4401 | 9.878667 | TGATCGACTAAATAAAATTGGTACAGA | 57.121 | 29.630 | 0.00 | 0.00 | 42.39 | 3.41 |
4047 | 4422 | 7.662604 | TTCAATGAGTCCATAATGATGATCG | 57.337 | 36.000 | 0.00 | 0.00 | 34.73 | 3.69 |
4061 | 4445 | 8.424274 | AAAATGAAAGGTTGTTTCAATGAGTC | 57.576 | 30.769 | 4.40 | 0.00 | 41.16 | 3.36 |
4080 | 4464 | 9.985730 | ATTGCAAGAAAATGAGAAGTAAAATGA | 57.014 | 25.926 | 4.94 | 0.00 | 0.00 | 2.57 |
4087 | 4471 | 9.468532 | GAGTTTAATTGCAAGAAAATGAGAAGT | 57.531 | 29.630 | 12.59 | 0.00 | 0.00 | 3.01 |
4089 | 4473 | 9.467258 | CTGAGTTTAATTGCAAGAAAATGAGAA | 57.533 | 29.630 | 14.20 | 0.86 | 0.00 | 2.87 |
4090 | 4474 | 7.596248 | GCTGAGTTTAATTGCAAGAAAATGAGA | 59.404 | 33.333 | 19.98 | 4.78 | 0.00 | 3.27 |
4108 | 4492 | 2.135933 | GCAGTTACGAGTGCTGAGTTT | 58.864 | 47.619 | 11.70 | 0.00 | 46.50 | 2.66 |
4182 | 4566 | 2.359040 | CGCAACAGCGTCGTCGTTA | 61.359 | 57.895 | 3.66 | 0.00 | 46.13 | 3.18 |
4236 | 4620 | 2.596338 | AGGCCGAAACCAAACCGG | 60.596 | 61.111 | 0.00 | 0.00 | 45.51 | 5.28 |
4271 | 4655 | 1.682323 | GTTCCTCCTACGGGATCTCAC | 59.318 | 57.143 | 0.00 | 0.00 | 41.36 | 3.51 |
4286 | 4670 | 2.568623 | ATCTCAAAGTTGCCGTTCCT | 57.431 | 45.000 | 0.00 | 0.00 | 0.00 | 3.36 |
4289 | 4673 | 4.278170 | TGAATGAATCTCAAAGTTGCCGTT | 59.722 | 37.500 | 0.00 | 0.00 | 0.00 | 4.44 |
4293 | 4677 | 4.801891 | TGCTGAATGAATCTCAAAGTTGC | 58.198 | 39.130 | 0.00 | 0.00 | 0.00 | 4.17 |
4296 | 4682 | 5.713389 | TCCATTGCTGAATGAATCTCAAAGT | 59.287 | 36.000 | 0.00 | 0.00 | 41.49 | 2.66 |
4312 | 4698 | 2.648059 | GTTATGACCAGCTCCATTGCT | 58.352 | 47.619 | 0.00 | 0.00 | 45.18 | 3.91 |
4349 | 4736 | 3.012518 | CGAAGCATTTCCAACTCTCCAT | 58.987 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
4383 | 4770 | 2.928801 | TACAGGCTTCTTGCACAAGA | 57.071 | 45.000 | 8.99 | 8.99 | 44.94 | 3.02 |
4458 | 4848 | 7.038302 | TGTTCTTTTCCTTTCTCTAGCTGGATA | 60.038 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
4573 | 4975 | 5.716228 | TGGTGTTGCCTATTCAAAAGATCAT | 59.284 | 36.000 | 0.00 | 0.00 | 38.35 | 2.45 |
4574 | 4976 | 5.048083 | GTGGTGTTGCCTATTCAAAAGATCA | 60.048 | 40.000 | 0.00 | 0.00 | 38.35 | 2.92 |
4684 | 5086 | 6.806739 | GGTTTTACCAGATATCTTTGTTGTGC | 59.193 | 38.462 | 1.33 | 0.00 | 38.42 | 4.57 |
4702 | 5105 | 9.194271 | TGAACTTTGTGTAACTTTTGGTTTTAC | 57.806 | 29.630 | 0.00 | 0.00 | 39.17 | 2.01 |
4814 | 5217 | 6.567602 | ATGAGTTGCCCTAAGTTTCTAGAT | 57.432 | 37.500 | 0.00 | 0.00 | 0.00 | 1.98 |
4832 | 5235 | 4.161565 | TGATTTGAGGGTAAGCGTATGAGT | 59.838 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
4836 | 5239 | 4.161565 | TGTCTGATTTGAGGGTAAGCGTAT | 59.838 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
4837 | 5240 | 3.512329 | TGTCTGATTTGAGGGTAAGCGTA | 59.488 | 43.478 | 0.00 | 0.00 | 0.00 | 4.42 |
4843 | 5246 | 1.405526 | GCGCTGTCTGATTTGAGGGTA | 60.406 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
4860 | 5263 | 1.806758 | GTTGGATGGCATGTTGCGC | 60.807 | 57.895 | 3.81 | 0.00 | 46.21 | 6.09 |
4865 | 5268 | 1.004628 | TGCTACAGTTGGATGGCATGT | 59.995 | 47.619 | 3.81 | 0.00 | 0.00 | 3.21 |
4867 | 5270 | 2.020694 | GCTGCTACAGTTGGATGGCAT | 61.021 | 52.381 | 0.00 | 0.00 | 33.43 | 4.40 |
4868 | 5271 | 0.677731 | GCTGCTACAGTTGGATGGCA | 60.678 | 55.000 | 0.00 | 0.00 | 33.43 | 4.92 |
4879 | 5282 | 2.566833 | ACCAGACATTTGCTGCTACA | 57.433 | 45.000 | 0.00 | 0.00 | 32.06 | 2.74 |
4880 | 5283 | 3.751175 | TGTAACCAGACATTTGCTGCTAC | 59.249 | 43.478 | 0.00 | 0.00 | 32.06 | 3.58 |
4881 | 5284 | 4.014569 | TGTAACCAGACATTTGCTGCTA | 57.985 | 40.909 | 0.00 | 0.00 | 32.06 | 3.49 |
4882 | 5285 | 2.862541 | TGTAACCAGACATTTGCTGCT | 58.137 | 42.857 | 0.00 | 0.00 | 32.06 | 4.24 |
4883 | 5286 | 3.855689 | ATGTAACCAGACATTTGCTGC | 57.144 | 42.857 | 0.00 | 0.00 | 36.64 | 5.25 |
5011 | 5421 | 7.898636 | TCCAAGGTTGAATAGGGTTTAATTCAT | 59.101 | 33.333 | 0.00 | 0.00 | 40.71 | 2.57 |
5029 | 5439 | 1.419762 | GGGTGCCAAAAATCCAAGGTT | 59.580 | 47.619 | 0.00 | 0.00 | 0.00 | 3.50 |
5031 | 5441 | 1.055040 | TGGGTGCCAAAAATCCAAGG | 58.945 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
5033 | 5443 | 1.202746 | GCTTGGGTGCCAAAAATCCAA | 60.203 | 47.619 | 0.00 | 0.00 | 43.44 | 3.53 |
5034 | 5444 | 0.396060 | GCTTGGGTGCCAAAAATCCA | 59.604 | 50.000 | 0.00 | 0.00 | 43.44 | 3.41 |
5035 | 5445 | 0.396060 | TGCTTGGGTGCCAAAAATCC | 59.604 | 50.000 | 0.00 | 0.00 | 43.44 | 3.01 |
5036 | 5446 | 1.511850 | GTGCTTGGGTGCCAAAAATC | 58.488 | 50.000 | 0.00 | 0.00 | 43.44 | 2.17 |
5037 | 5447 | 0.108396 | GGTGCTTGGGTGCCAAAAAT | 59.892 | 50.000 | 0.00 | 0.00 | 43.44 | 1.82 |
5038 | 5448 | 1.524482 | GGTGCTTGGGTGCCAAAAA | 59.476 | 52.632 | 0.00 | 0.00 | 43.44 | 1.94 |
5039 | 5449 | 2.790791 | CGGTGCTTGGGTGCCAAAA | 61.791 | 57.895 | 0.00 | 0.00 | 43.44 | 2.44 |
5040 | 5450 | 3.222855 | CGGTGCTTGGGTGCCAAA | 61.223 | 61.111 | 0.00 | 0.00 | 43.44 | 3.28 |
5053 | 5463 | 4.802051 | CATGGGAGGCCACCGGTG | 62.802 | 72.222 | 28.26 | 28.26 | 0.00 | 4.94 |
5056 | 5466 | 4.864334 | GAGCATGGGAGGCCACCG | 62.864 | 72.222 | 13.57 | 0.37 | 0.00 | 4.94 |
5057 | 5467 | 3.415087 | AGAGCATGGGAGGCCACC | 61.415 | 66.667 | 11.39 | 11.39 | 0.00 | 4.61 |
5058 | 5468 | 2.124403 | CAGAGCATGGGAGGCCAC | 60.124 | 66.667 | 5.01 | 0.00 | 0.00 | 5.01 |
5059 | 5469 | 4.119363 | GCAGAGCATGGGAGGCCA | 62.119 | 66.667 | 5.01 | 0.00 | 0.00 | 5.36 |
5060 | 5470 | 3.771110 | GAGCAGAGCATGGGAGGCC | 62.771 | 68.421 | 0.00 | 0.00 | 0.00 | 5.19 |
5061 | 5471 | 2.203181 | GAGCAGAGCATGGGAGGC | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
5062 | 5472 | 0.179051 | GAAGAGCAGAGCATGGGAGG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5063 | 5473 | 0.179051 | GGAAGAGCAGAGCATGGGAG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5064 | 5474 | 0.619832 | AGGAAGAGCAGAGCATGGGA | 60.620 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
5065 | 5475 | 0.179051 | GAGGAAGAGCAGAGCATGGG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
5066 | 5476 | 0.530211 | CGAGGAAGAGCAGAGCATGG | 60.530 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
5067 | 5477 | 1.152989 | GCGAGGAAGAGCAGAGCATG | 61.153 | 60.000 | 0.00 | 0.00 | 0.00 | 4.06 |
5068 | 5478 | 1.143620 | GCGAGGAAGAGCAGAGCAT | 59.856 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
5069 | 5479 | 2.575993 | GCGAGGAAGAGCAGAGCA | 59.424 | 61.111 | 0.00 | 0.00 | 0.00 | 4.26 |
5070 | 5480 | 2.202864 | GGCGAGGAAGAGCAGAGC | 60.203 | 66.667 | 0.00 | 0.00 | 34.54 | 4.09 |
5071 | 5481 | 2.103934 | CGGCGAGGAAGAGCAGAG | 59.896 | 66.667 | 0.00 | 0.00 | 34.54 | 3.35 |
5072 | 5482 | 4.135153 | GCGGCGAGGAAGAGCAGA | 62.135 | 66.667 | 12.98 | 0.00 | 34.54 | 4.26 |
5145 | 5555 | 3.869272 | GACATTGCCAGCTCCGCG | 61.869 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
5146 | 5556 | 0.815213 | TATGACATTGCCAGCTCCGC | 60.815 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
5147 | 5557 | 1.534163 | CATATGACATTGCCAGCTCCG | 59.466 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
5148 | 5558 | 2.292569 | CACATATGACATTGCCAGCTCC | 59.707 | 50.000 | 10.38 | 0.00 | 0.00 | 4.70 |
5149 | 5559 | 2.287427 | GCACATATGACATTGCCAGCTC | 60.287 | 50.000 | 10.38 | 0.00 | 0.00 | 4.09 |
5150 | 5560 | 1.679680 | GCACATATGACATTGCCAGCT | 59.320 | 47.619 | 10.38 | 0.00 | 0.00 | 4.24 |
5151 | 5561 | 2.129823 | GCACATATGACATTGCCAGC | 57.870 | 50.000 | 10.38 | 0.00 | 0.00 | 4.85 |
5155 | 5565 | 3.480470 | ACTAGGGCACATATGACATTGC | 58.520 | 45.455 | 10.38 | 8.59 | 34.30 | 3.56 |
5156 | 5566 | 4.707105 | TGACTAGGGCACATATGACATTG | 58.293 | 43.478 | 10.38 | 0.00 | 34.30 | 2.82 |
5157 | 5567 | 5.372343 | TTGACTAGGGCACATATGACATT | 57.628 | 39.130 | 10.38 | 0.00 | 34.30 | 2.71 |
5158 | 5568 | 5.372343 | TTTGACTAGGGCACATATGACAT | 57.628 | 39.130 | 10.38 | 0.00 | 34.30 | 3.06 |
5159 | 5569 | 4.835284 | TTTGACTAGGGCACATATGACA | 57.165 | 40.909 | 10.38 | 0.00 | 34.30 | 3.58 |
5160 | 5570 | 6.073765 | CGTAATTTGACTAGGGCACATATGAC | 60.074 | 42.308 | 10.38 | 0.58 | 0.00 | 3.06 |
5161 | 5571 | 5.989168 | CGTAATTTGACTAGGGCACATATGA | 59.011 | 40.000 | 10.38 | 0.00 | 0.00 | 2.15 |
5162 | 5572 | 5.758296 | ACGTAATTTGACTAGGGCACATATG | 59.242 | 40.000 | 0.00 | 0.00 | 0.00 | 1.78 |
5163 | 5573 | 5.925509 | ACGTAATTTGACTAGGGCACATAT | 58.074 | 37.500 | 0.00 | 0.00 | 0.00 | 1.78 |
5164 | 5574 | 5.347620 | ACGTAATTTGACTAGGGCACATA | 57.652 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
5165 | 5575 | 4.189231 | GACGTAATTTGACTAGGGCACAT | 58.811 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
5166 | 5576 | 3.592059 | GACGTAATTTGACTAGGGCACA | 58.408 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
5167 | 5577 | 2.601763 | CGACGTAATTTGACTAGGGCAC | 59.398 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
5168 | 5578 | 2.883574 | CGACGTAATTTGACTAGGGCA | 58.116 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
5169 | 5579 | 1.591619 | GCGACGTAATTTGACTAGGGC | 59.408 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
5170 | 5580 | 2.199236 | GGCGACGTAATTTGACTAGGG | 58.801 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
5185 | 5595 | 1.352156 | AAGATCAACGAAGCGGCGAC | 61.352 | 55.000 | 12.98 | 1.23 | 34.83 | 5.19 |
5186 | 5596 | 1.076533 | GAAGATCAACGAAGCGGCGA | 61.077 | 55.000 | 12.98 | 0.00 | 34.83 | 5.54 |
5187 | 5597 | 1.345176 | GAAGATCAACGAAGCGGCG | 59.655 | 57.895 | 0.51 | 0.51 | 37.29 | 6.46 |
5188 | 5598 | 1.345176 | CGAAGATCAACGAAGCGGC | 59.655 | 57.895 | 5.81 | 0.00 | 0.00 | 6.53 |
5189 | 5599 | 1.345176 | GCGAAGATCAACGAAGCGG | 59.655 | 57.895 | 14.02 | 0.00 | 0.00 | 5.52 |
5190 | 5600 | 1.345176 | GGCGAAGATCAACGAAGCG | 59.655 | 57.895 | 14.02 | 0.00 | 0.00 | 4.68 |
5191 | 5601 | 0.796312 | TTGGCGAAGATCAACGAAGC | 59.204 | 50.000 | 14.02 | 2.25 | 0.00 | 3.86 |
5192 | 5602 | 2.092838 | GTCTTGGCGAAGATCAACGAAG | 59.907 | 50.000 | 14.60 | 9.88 | 40.40 | 3.79 |
5193 | 5603 | 2.066262 | GTCTTGGCGAAGATCAACGAA | 58.934 | 47.619 | 14.60 | 1.99 | 40.40 | 3.85 |
5194 | 5604 | 1.000394 | TGTCTTGGCGAAGATCAACGA | 60.000 | 47.619 | 14.60 | 0.00 | 40.40 | 3.85 |
5195 | 5605 | 1.391485 | CTGTCTTGGCGAAGATCAACG | 59.609 | 52.381 | 14.60 | 1.02 | 40.40 | 4.10 |
5196 | 5606 | 1.129437 | GCTGTCTTGGCGAAGATCAAC | 59.871 | 52.381 | 14.60 | 6.58 | 40.40 | 3.18 |
5197 | 5607 | 1.002430 | AGCTGTCTTGGCGAAGATCAA | 59.998 | 47.619 | 14.60 | 3.27 | 40.40 | 2.57 |
5198 | 5608 | 0.610174 | AGCTGTCTTGGCGAAGATCA | 59.390 | 50.000 | 14.60 | 12.54 | 40.40 | 2.92 |
5199 | 5609 | 1.663135 | GAAGCTGTCTTGGCGAAGATC | 59.337 | 52.381 | 14.60 | 8.86 | 40.40 | 2.75 |
5200 | 5610 | 1.277557 | AGAAGCTGTCTTGGCGAAGAT | 59.722 | 47.619 | 14.60 | 0.00 | 40.40 | 2.40 |
5201 | 5611 | 0.681733 | AGAAGCTGTCTTGGCGAAGA | 59.318 | 50.000 | 7.12 | 7.12 | 35.75 | 2.87 |
5202 | 5612 | 1.517242 | AAGAAGCTGTCTTGGCGAAG | 58.483 | 50.000 | 1.39 | 1.39 | 45.29 | 3.79 |
5203 | 5613 | 1.967319 | AAAGAAGCTGTCTTGGCGAA | 58.033 | 45.000 | 10.60 | 0.00 | 46.36 | 4.70 |
5204 | 5614 | 1.967319 | AAAAGAAGCTGTCTTGGCGA | 58.033 | 45.000 | 10.60 | 0.00 | 46.36 | 5.54 |
5205 | 5615 | 2.781945 | AAAAAGAAGCTGTCTTGGCG | 57.218 | 45.000 | 10.60 | 0.00 | 46.36 | 5.69 |
5221 | 5631 | 3.436055 | CATCCCGCGGGCGAAAAA | 61.436 | 61.111 | 39.89 | 22.17 | 42.83 | 1.94 |
5238 | 5648 | 1.275066 | CGAGCTTTGATGCTAGCGC | 59.725 | 57.895 | 10.77 | 0.00 | 44.17 | 5.92 |
5241 | 5651 | 0.574454 | GTCGCGAGCTTTGATGCTAG | 59.426 | 55.000 | 10.24 | 0.00 | 44.17 | 3.42 |
5242 | 5652 | 1.139816 | CGTCGCGAGCTTTGATGCTA | 61.140 | 55.000 | 10.24 | 0.00 | 44.17 | 3.49 |
5244 | 5654 | 2.020559 | CGTCGCGAGCTTTGATGC | 59.979 | 61.111 | 10.24 | 0.00 | 0.00 | 3.91 |
5245 | 5655 | 1.148157 | ATCCGTCGCGAGCTTTGATG | 61.148 | 55.000 | 10.24 | 0.00 | 0.00 | 3.07 |
5246 | 5656 | 1.141881 | ATCCGTCGCGAGCTTTGAT | 59.858 | 52.632 | 10.24 | 4.43 | 0.00 | 2.57 |
5247 | 5657 | 1.805539 | CATCCGTCGCGAGCTTTGA | 60.806 | 57.895 | 10.24 | 1.83 | 0.00 | 2.69 |
5248 | 5658 | 2.014093 | GACATCCGTCGCGAGCTTTG | 62.014 | 60.000 | 10.24 | 8.33 | 31.07 | 2.77 |
5249 | 5659 | 1.805945 | GACATCCGTCGCGAGCTTT | 60.806 | 57.895 | 10.24 | 0.00 | 31.07 | 3.51 |
5250 | 5660 | 2.202623 | GACATCCGTCGCGAGCTT | 60.203 | 61.111 | 10.24 | 0.00 | 31.07 | 3.74 |
5261 | 5671 | 4.856801 | ATGCCGCCCACGACATCC | 62.857 | 66.667 | 0.00 | 0.00 | 37.96 | 3.51 |
5262 | 5672 | 2.916502 | TACATGCCGCCCACGACATC | 62.917 | 60.000 | 0.00 | 0.00 | 40.66 | 3.06 |
5263 | 5673 | 2.923426 | CTACATGCCGCCCACGACAT | 62.923 | 60.000 | 0.00 | 0.00 | 43.64 | 3.06 |
5264 | 5674 | 3.657448 | CTACATGCCGCCCACGACA | 62.657 | 63.158 | 0.00 | 0.00 | 43.93 | 4.35 |
5265 | 5675 | 2.287457 | TACTACATGCCGCCCACGAC | 62.287 | 60.000 | 0.00 | 0.00 | 43.93 | 4.34 |
5266 | 5676 | 2.053277 | TACTACATGCCGCCCACGA | 61.053 | 57.895 | 0.00 | 0.00 | 43.93 | 4.35 |
5267 | 5677 | 2.497293 | TACTACATGCCGCCCACG | 59.503 | 61.111 | 0.00 | 0.00 | 39.67 | 4.94 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.