Multiple sequence alignment - TraesCS5A01G296100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G296100 chr5A 100.000 5586 0 0 1 5586 504758205 504763790 0.000000e+00 10316.0
1 TraesCS5A01G296100 chr5A 98.128 2190 36 4 3244 5431 452277424 452275238 0.000000e+00 3812.0
2 TraesCS5A01G296100 chr5A 98.294 1172 14 4 341 1512 452278611 452277446 0.000000e+00 2049.0
3 TraesCS5A01G296100 chr5A 90.148 609 50 3 4111 4715 600887663 600888265 0.000000e+00 784.0
4 TraesCS5A01G296100 chr4B 99.136 5094 36 6 341 5430 553360478 553355389 0.000000e+00 9156.0
5 TraesCS5A01G296100 chr4B 90.613 799 59 13 341 1137 82166278 82167062 0.000000e+00 1046.0
6 TraesCS5A01G296100 chr1B 98.272 5093 77 7 343 5431 112361244 112356159 0.000000e+00 8907.0
7 TraesCS5A01G296100 chr1B 98.492 2189 28 4 3244 5431 588507111 588509295 0.000000e+00 3855.0
8 TraesCS5A01G296100 chr1B 94.798 1884 79 12 2193 4073 16563984 16565851 0.000000e+00 2918.0
9 TraesCS5A01G296100 chr1B 92.804 1890 90 26 2193 4073 222201608 222199756 0.000000e+00 2695.0
10 TraesCS5A01G296100 chr1B 98.549 1172 11 4 341 1512 588505924 588507089 0.000000e+00 2065.0
11 TraesCS5A01G296100 chr1B 94.129 1073 55 7 1142 2212 16562906 16563972 0.000000e+00 1626.0
12 TraesCS5A01G296100 chr1B 91.950 646 28 6 4803 5424 24024257 24024902 0.000000e+00 883.0
13 TraesCS5A01G296100 chr1B 92.994 314 21 1 5112 5424 328503686 328503999 1.830000e-124 457.0
14 TraesCS5A01G296100 chr1B 89.796 49 2 3 288 335 172382102 172382148 6.040000e-05 60.2
15 TraesCS5A01G296100 chr1B 94.737 38 1 1 303 340 203647244 203647280 2.170000e-04 58.4
16 TraesCS5A01G296100 chr1B 92.683 41 1 1 302 340 634320867 634320827 2.170000e-04 58.4
17 TraesCS5A01G296100 chr3A 98.216 2186 34 4 3244 5428 743445640 743447821 0.000000e+00 3816.0
18 TraesCS5A01G296100 chr3A 98.464 1172 14 4 341 1512 743444451 743445618 0.000000e+00 2061.0
19 TraesCS5A01G296100 chr3A 88.871 1267 97 17 4085 5317 719529826 719531082 0.000000e+00 1519.0
20 TraesCS5A01G296100 chr3A 89.907 753 56 7 4472 5206 291177765 291178515 0.000000e+00 952.0
21 TraesCS5A01G296100 chr2B 98.080 2188 34 6 3244 5430 604468997 604466817 0.000000e+00 3801.0
22 TraesCS5A01G296100 chr2B 98.462 1170 12 4 343 1512 604470182 604469019 0.000000e+00 2056.0
23 TraesCS5A01G296100 chr2B 86.580 1155 97 16 4111 5244 568667422 568668539 0.000000e+00 1221.0
24 TraesCS5A01G296100 chr2B 84.000 175 25 2 1 175 237761355 237761184 1.240000e-36 165.0
25 TraesCS5A01G296100 chr2B 92.683 41 1 1 302 340 792774984 792774944 2.170000e-04 58.4
26 TraesCS5A01G296100 chr3B 93.114 1888 95 20 2193 4073 641067478 641069337 0.000000e+00 2734.0
27 TraesCS5A01G296100 chr3B 93.072 1891 89 26 2193 4073 457030929 457029071 0.000000e+00 2728.0
28 TraesCS5A01G296100 chr3B 94.398 1071 56 3 1142 2211 641066398 641067465 0.000000e+00 1642.0
29 TraesCS5A01G296100 chr4D 94.429 1777 85 8 1142 2912 115203890 115202122 0.000000e+00 2721.0
30 TraesCS5A01G296100 chr4D 93.300 1776 86 9 1142 2912 81177206 81175459 0.000000e+00 2590.0
31 TraesCS5A01G296100 chr4D 91.211 512 31 4 4111 4618 58913781 58914282 0.000000e+00 684.0
32 TraesCS5A01G296100 chr6A 92.910 1890 92 27 2193 4073 60386965 60385109 0.000000e+00 2710.0
33 TraesCS5A01G296100 chr6A 94.310 1775 89 6 1142 2912 617537424 617535658 0.000000e+00 2708.0
34 TraesCS5A01G296100 chr6A 93.948 1074 60 4 1138 2210 194805754 194806823 0.000000e+00 1618.0
35 TraesCS5A01G296100 chr6A 90.613 799 57 13 341 1137 194804233 194805015 0.000000e+00 1044.0
36 TraesCS5A01G296100 chr6B 87.576 2302 199 39 1830 4073 655234254 655236526 0.000000e+00 2586.0
37 TraesCS5A01G296100 chr6B 94.044 638 22 4 4803 5424 187092828 187093465 0.000000e+00 953.0
38 TraesCS5A01G296100 chr7A 92.433 1784 96 7 1142 2912 608953998 608952241 0.000000e+00 2510.0
39 TraesCS5A01G296100 chr7A 94.288 1068 56 4 1144 2210 710684890 710683827 0.000000e+00 1629.0
40 TraesCS5A01G296100 chr7A 90.613 799 58 13 341 1137 710685740 710684957 0.000000e+00 1044.0
41 TraesCS5A01G296100 chr4A 86.532 2272 202 31 1830 4068 310427189 310424989 0.000000e+00 2405.0
42 TraesCS5A01G296100 chr4A 80.814 172 29 3 1 172 546204586 546204753 1.260000e-26 132.0
43 TraesCS5A01G296100 chr4A 90.000 50 1 4 294 342 597833811 597833765 1.680000e-05 62.1
44 TraesCS5A01G296100 chr4A 97.297 37 0 1 294 330 597833818 597833783 1.680000e-05 62.1
45 TraesCS5A01G296100 chr4A 91.111 45 2 2 294 338 571068517 571068475 6.040000e-05 60.2
46 TraesCS5A01G296100 chr7B 87.049 942 92 9 2473 3394 740575632 740576563 0.000000e+00 1037.0
47 TraesCS5A01G296100 chr7B 88.316 873 77 9 2473 3324 740562091 740562959 0.000000e+00 1024.0
48 TraesCS5A01G296100 chr7B 88.202 873 78 9 2473 3324 740655353 740656221 0.000000e+00 1018.0
49 TraesCS5A01G296100 chr7B 86.364 176 15 5 1 175 418861940 418861773 3.440000e-42 183.0
50 TraesCS5A01G296100 chr7B 88.679 53 0 4 294 340 519231293 519231241 6.040000e-05 60.2
51 TraesCS5A01G296100 chr2D 89.444 180 18 1 1 180 108913049 108913227 5.630000e-55 226.0
52 TraesCS5A01G296100 chr5D 92.500 120 7 2 173 291 399144431 399144549 2.680000e-38 171.0
53 TraesCS5A01G296100 chr5D 83.626 171 26 1 3 173 514144342 514144510 5.790000e-35 159.0
54 TraesCS5A01G296100 chr5D 92.683 41 1 1 302 340 547838853 547838813 2.170000e-04 58.4
55 TraesCS5A01G296100 chr5B 84.000 175 27 1 1 175 537476646 537476473 3.460000e-37 167.0
56 TraesCS5A01G296100 chr5B 85.185 162 22 2 5427 5586 479318233 479318394 1.240000e-36 165.0
57 TraesCS5A01G296100 chr5B 90.833 120 9 2 173 291 479318095 479318213 5.790000e-35 159.0
58 TraesCS5A01G296100 chr7D 85.075 134 19 1 1 134 233067220 233067352 9.760000e-28 135.0
59 TraesCS5A01G296100 chr7D 79.885 174 26 7 1 173 551942345 551942510 9.830000e-23 119.0
60 TraesCS5A01G296100 chr3D 82.143 112 19 1 66 177 441581238 441581128 1.660000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G296100 chr5A 504758205 504763790 5585 False 10316.0 10316 100.0000 1 5586 1 chr5A.!!$F1 5585
1 TraesCS5A01G296100 chr5A 452275238 452278611 3373 True 2930.5 3812 98.2110 341 5431 2 chr5A.!!$R1 5090
2 TraesCS5A01G296100 chr5A 600887663 600888265 602 False 784.0 784 90.1480 4111 4715 1 chr5A.!!$F2 604
3 TraesCS5A01G296100 chr4B 553355389 553360478 5089 True 9156.0 9156 99.1360 341 5430 1 chr4B.!!$R1 5089
4 TraesCS5A01G296100 chr4B 82166278 82167062 784 False 1046.0 1046 90.6130 341 1137 1 chr4B.!!$F1 796
5 TraesCS5A01G296100 chr1B 112356159 112361244 5085 True 8907.0 8907 98.2720 343 5431 1 chr1B.!!$R1 5088
6 TraesCS5A01G296100 chr1B 588505924 588509295 3371 False 2960.0 3855 98.5205 341 5431 2 chr1B.!!$F6 5090
7 TraesCS5A01G296100 chr1B 222199756 222201608 1852 True 2695.0 2695 92.8040 2193 4073 1 chr1B.!!$R2 1880
8 TraesCS5A01G296100 chr1B 16562906 16565851 2945 False 2272.0 2918 94.4635 1142 4073 2 chr1B.!!$F5 2931
9 TraesCS5A01G296100 chr1B 24024257 24024902 645 False 883.0 883 91.9500 4803 5424 1 chr1B.!!$F1 621
10 TraesCS5A01G296100 chr3A 743444451 743447821 3370 False 2938.5 3816 98.3400 341 5428 2 chr3A.!!$F3 5087
11 TraesCS5A01G296100 chr3A 719529826 719531082 1256 False 1519.0 1519 88.8710 4085 5317 1 chr3A.!!$F2 1232
12 TraesCS5A01G296100 chr3A 291177765 291178515 750 False 952.0 952 89.9070 4472 5206 1 chr3A.!!$F1 734
13 TraesCS5A01G296100 chr2B 604466817 604470182 3365 True 2928.5 3801 98.2710 343 5430 2 chr2B.!!$R3 5087
14 TraesCS5A01G296100 chr2B 568667422 568668539 1117 False 1221.0 1221 86.5800 4111 5244 1 chr2B.!!$F1 1133
15 TraesCS5A01G296100 chr3B 457029071 457030929 1858 True 2728.0 2728 93.0720 2193 4073 1 chr3B.!!$R1 1880
16 TraesCS5A01G296100 chr3B 641066398 641069337 2939 False 2188.0 2734 93.7560 1142 4073 2 chr3B.!!$F1 2931
17 TraesCS5A01G296100 chr4D 115202122 115203890 1768 True 2721.0 2721 94.4290 1142 2912 1 chr4D.!!$R2 1770
18 TraesCS5A01G296100 chr4D 81175459 81177206 1747 True 2590.0 2590 93.3000 1142 2912 1 chr4D.!!$R1 1770
19 TraesCS5A01G296100 chr4D 58913781 58914282 501 False 684.0 684 91.2110 4111 4618 1 chr4D.!!$F1 507
20 TraesCS5A01G296100 chr6A 60385109 60386965 1856 True 2710.0 2710 92.9100 2193 4073 1 chr6A.!!$R1 1880
21 TraesCS5A01G296100 chr6A 617535658 617537424 1766 True 2708.0 2708 94.3100 1142 2912 1 chr6A.!!$R2 1770
22 TraesCS5A01G296100 chr6A 194804233 194806823 2590 False 1331.0 1618 92.2805 341 2210 2 chr6A.!!$F1 1869
23 TraesCS5A01G296100 chr6B 655234254 655236526 2272 False 2586.0 2586 87.5760 1830 4073 1 chr6B.!!$F2 2243
24 TraesCS5A01G296100 chr6B 187092828 187093465 637 False 953.0 953 94.0440 4803 5424 1 chr6B.!!$F1 621
25 TraesCS5A01G296100 chr7A 608952241 608953998 1757 True 2510.0 2510 92.4330 1142 2912 1 chr7A.!!$R1 1770
26 TraesCS5A01G296100 chr7A 710683827 710685740 1913 True 1336.5 1629 92.4505 341 2210 2 chr7A.!!$R2 1869
27 TraesCS5A01G296100 chr4A 310424989 310427189 2200 True 2405.0 2405 86.5320 1830 4068 1 chr4A.!!$R1 2238
28 TraesCS5A01G296100 chr7B 740575632 740576563 931 False 1037.0 1037 87.0490 2473 3394 1 chr7B.!!$F2 921
29 TraesCS5A01G296100 chr7B 740562091 740562959 868 False 1024.0 1024 88.3160 2473 3324 1 chr7B.!!$F1 851
30 TraesCS5A01G296100 chr7B 740655353 740656221 868 False 1018.0 1018 88.2020 2473 3324 1 chr7B.!!$F3 851

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.030638 CAAAAACAGTGTCTGGGGCG 59.969 55.0 0.0 0.0 35.51 6.13 F
115 116 0.099791 CGCCAAATTTATCGCCGGTT 59.900 50.0 1.9 0.0 0.00 4.44 F
173 174 0.107945 GAACGGCTGGAGATGCTCTT 60.108 55.0 0.0 0.0 0.00 2.85 F
281 282 0.250553 TCAAAAACAGTCGCCCCGAT 60.251 50.0 0.0 0.0 38.42 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1928 2676 2.046892 CACAGCCTCCTTCCCACG 60.047 66.667 0.00 0.0 0.00 4.94 R
2010 2761 3.148412 CTGATGGTCCACACAACATCAA 58.852 45.455 0.00 0.0 46.17 2.57 R
3273 4139 4.689612 AACATTAGGAGCCATGATACGT 57.310 40.909 0.00 0.0 0.00 3.57 R
5169 6096 2.522923 TTGCAACCCGGCCAACAT 60.523 55.556 2.24 0.0 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.650369 GTGTCGTGTTTGCCCGAT 58.350 55.556 0.00 0.00 35.30 4.18
18 19 1.946267 GTGTCGTGTTTGCCCGATT 59.054 52.632 0.00 0.00 35.30 3.34
19 20 0.309612 GTGTCGTGTTTGCCCGATTT 59.690 50.000 0.00 0.00 35.30 2.17
20 21 1.025812 TGTCGTGTTTGCCCGATTTT 58.974 45.000 0.00 0.00 35.30 1.82
21 22 1.002251 TGTCGTGTTTGCCCGATTTTC 60.002 47.619 0.00 0.00 35.30 2.29
22 23 0.236187 TCGTGTTTGCCCGATTTTCG 59.764 50.000 0.00 0.00 40.07 3.46
32 33 3.290098 CGATTTTCGGCCGAGTTTG 57.710 52.632 29.20 16.29 36.00 2.93
33 34 0.179200 CGATTTTCGGCCGAGTTTGG 60.179 55.000 29.20 15.04 36.00 3.28
34 35 0.879090 GATTTTCGGCCGAGTTTGGT 59.121 50.000 29.20 12.30 0.00 3.67
35 36 1.268625 GATTTTCGGCCGAGTTTGGTT 59.731 47.619 29.20 10.08 0.00 3.67
36 37 1.104630 TTTTCGGCCGAGTTTGGTTT 58.895 45.000 29.20 0.00 0.00 3.27
37 38 1.104630 TTTCGGCCGAGTTTGGTTTT 58.895 45.000 29.20 0.00 0.00 2.43
38 39 1.964552 TTCGGCCGAGTTTGGTTTTA 58.035 45.000 29.20 6.31 0.00 1.52
39 40 1.964552 TCGGCCGAGTTTGGTTTTAA 58.035 45.000 27.28 0.00 0.00 1.52
40 41 1.603326 TCGGCCGAGTTTGGTTTTAAC 59.397 47.619 27.28 0.00 0.00 2.01
41 42 1.334243 CGGCCGAGTTTGGTTTTAACA 59.666 47.619 24.07 0.00 0.00 2.41
42 43 2.223525 CGGCCGAGTTTGGTTTTAACAA 60.224 45.455 24.07 0.00 0.00 2.83
43 44 3.734293 CGGCCGAGTTTGGTTTTAACAAA 60.734 43.478 24.07 0.00 35.62 2.83
44 45 4.182339 GGCCGAGTTTGGTTTTAACAAAA 58.818 39.130 0.00 0.00 39.29 2.44
45 46 4.630505 GGCCGAGTTTGGTTTTAACAAAAA 59.369 37.500 0.00 0.00 39.29 1.94
46 47 5.446206 GGCCGAGTTTGGTTTTAACAAAAAC 60.446 40.000 11.90 11.90 39.29 2.43
47 48 5.120363 GCCGAGTTTGGTTTTAACAAAAACA 59.880 36.000 17.75 6.59 45.69 2.83
55 56 6.159988 TGGTTTTAACAAAAACAGTGTCTGG 58.840 36.000 13.84 0.00 42.75 3.86
56 57 5.579119 GGTTTTAACAAAAACAGTGTCTGGG 59.421 40.000 13.84 0.00 42.73 4.45
57 58 4.993029 TTAACAAAAACAGTGTCTGGGG 57.007 40.909 0.00 0.00 35.51 4.96
58 59 1.111277 ACAAAAACAGTGTCTGGGGC 58.889 50.000 0.00 0.00 35.51 5.80
59 60 0.030638 CAAAAACAGTGTCTGGGGCG 59.969 55.000 0.00 0.00 35.51 6.13
60 61 0.106918 AAAAACAGTGTCTGGGGCGA 60.107 50.000 0.00 0.00 35.51 5.54
61 62 0.818040 AAAACAGTGTCTGGGGCGAC 60.818 55.000 0.00 0.00 35.51 5.19
87 88 4.700365 GGCGGCTGCGAAACCAAC 62.700 66.667 12.29 0.00 44.10 3.77
88 89 3.660111 GCGGCTGCGAAACCAACT 61.660 61.111 0.00 0.00 0.00 3.16
89 90 2.252260 CGGCTGCGAAACCAACTG 59.748 61.111 0.00 0.00 0.00 3.16
90 91 2.050077 GGCTGCGAAACCAACTGC 60.050 61.111 0.00 0.00 0.00 4.40
91 92 2.050077 GCTGCGAAACCAACTGCC 60.050 61.111 0.00 0.00 0.00 4.85
92 93 2.644992 CTGCGAAACCAACTGCCC 59.355 61.111 0.00 0.00 0.00 5.36
93 94 2.909965 TGCGAAACCAACTGCCCC 60.910 61.111 0.00 0.00 0.00 5.80
94 95 3.680786 GCGAAACCAACTGCCCCC 61.681 66.667 0.00 0.00 0.00 5.40
95 96 2.203422 CGAAACCAACTGCCCCCA 60.203 61.111 0.00 0.00 0.00 4.96
96 97 2.561037 CGAAACCAACTGCCCCCAC 61.561 63.158 0.00 0.00 0.00 4.61
97 98 2.520741 AAACCAACTGCCCCCACG 60.521 61.111 0.00 0.00 0.00 4.94
102 103 4.531426 AACTGCCCCCACGCCAAA 62.531 61.111 0.00 0.00 0.00 3.28
103 104 3.826265 AACTGCCCCCACGCCAAAT 62.826 57.895 0.00 0.00 0.00 2.32
104 105 2.996734 CTGCCCCCACGCCAAATT 60.997 61.111 0.00 0.00 0.00 1.82
105 106 2.525381 TGCCCCCACGCCAAATTT 60.525 55.556 0.00 0.00 0.00 1.82
106 107 1.228894 TGCCCCCACGCCAAATTTA 60.229 52.632 0.00 0.00 0.00 1.40
107 108 0.616111 TGCCCCCACGCCAAATTTAT 60.616 50.000 0.00 0.00 0.00 1.40
108 109 0.104120 GCCCCCACGCCAAATTTATC 59.896 55.000 0.00 0.00 0.00 1.75
109 110 0.383949 CCCCCACGCCAAATTTATCG 59.616 55.000 8.99 8.99 0.00 2.92
110 111 0.248866 CCCCACGCCAAATTTATCGC 60.249 55.000 10.10 3.37 0.00 4.58
111 112 0.248866 CCCACGCCAAATTTATCGCC 60.249 55.000 10.10 0.00 0.00 5.54
112 113 0.591236 CCACGCCAAATTTATCGCCG 60.591 55.000 10.10 3.39 0.00 6.46
113 114 0.591236 CACGCCAAATTTATCGCCGG 60.591 55.000 0.00 0.00 0.00 6.13
114 115 1.027792 ACGCCAAATTTATCGCCGGT 61.028 50.000 1.90 0.00 0.00 5.28
115 116 0.099791 CGCCAAATTTATCGCCGGTT 59.900 50.000 1.90 0.00 0.00 4.44
116 117 1.835121 GCCAAATTTATCGCCGGTTC 58.165 50.000 1.90 0.00 0.00 3.62
117 118 1.858399 GCCAAATTTATCGCCGGTTCG 60.858 52.381 1.90 0.00 0.00 3.95
118 119 1.462791 CAAATTTATCGCCGGTTCGC 58.537 50.000 1.90 0.00 0.00 4.70
119 120 0.379316 AAATTTATCGCCGGTTCGCC 59.621 50.000 1.90 0.00 0.00 5.54
120 121 1.441732 AATTTATCGCCGGTTCGCCC 61.442 55.000 1.90 0.00 0.00 6.13
121 122 4.534141 TTATCGCCGGTTCGCCCC 62.534 66.667 1.90 0.00 0.00 5.80
134 135 4.008933 GCCCCGAGATGGCGCTAT 62.009 66.667 5.72 5.72 39.48 2.97
135 136 2.743718 CCCCGAGATGGCGCTATT 59.256 61.111 7.98 0.00 35.87 1.73
136 137 1.071471 CCCCGAGATGGCGCTATTT 59.929 57.895 7.98 0.87 35.87 1.40
137 138 0.951040 CCCCGAGATGGCGCTATTTC 60.951 60.000 13.45 13.45 35.87 2.17
138 139 0.249868 CCCGAGATGGCGCTATTTCA 60.250 55.000 21.38 5.46 35.87 2.69
139 140 1.581934 CCGAGATGGCGCTATTTCAA 58.418 50.000 21.38 0.00 0.00 2.69
140 141 1.939934 CCGAGATGGCGCTATTTCAAA 59.060 47.619 21.38 0.00 0.00 2.69
141 142 2.286418 CCGAGATGGCGCTATTTCAAAC 60.286 50.000 21.38 2.73 0.00 2.93
142 143 2.286418 CGAGATGGCGCTATTTCAAACC 60.286 50.000 21.38 2.03 0.00 3.27
143 144 2.024414 AGATGGCGCTATTTCAAACCC 58.976 47.619 7.98 0.00 0.00 4.11
144 145 1.067060 GATGGCGCTATTTCAAACCCC 59.933 52.381 7.98 0.00 0.00 4.95
145 146 0.968393 TGGCGCTATTTCAAACCCCC 60.968 55.000 7.64 0.00 0.00 5.40
146 147 1.431845 GCGCTATTTCAAACCCCCG 59.568 57.895 0.00 0.00 0.00 5.73
147 148 2.000215 GCGCTATTTCAAACCCCCGG 62.000 60.000 0.00 0.00 0.00 5.73
148 149 0.393267 CGCTATTTCAAACCCCCGGA 60.393 55.000 0.73 0.00 0.00 5.14
149 150 1.842052 GCTATTTCAAACCCCCGGAA 58.158 50.000 0.73 0.00 0.00 4.30
150 151 1.749063 GCTATTTCAAACCCCCGGAAG 59.251 52.381 0.73 0.00 0.00 3.46
151 152 2.619590 GCTATTTCAAACCCCCGGAAGA 60.620 50.000 0.73 0.00 0.00 2.87
152 153 1.919240 ATTTCAAACCCCCGGAAGAC 58.081 50.000 0.73 0.00 0.00 3.01
153 154 0.178984 TTTCAAACCCCCGGAAGACC 60.179 55.000 0.73 0.00 0.00 3.85
163 164 2.434359 GGAAGACCGAACGGCTGG 60.434 66.667 13.32 0.00 39.32 4.85
164 165 2.654877 GAAGACCGAACGGCTGGA 59.345 61.111 13.32 0.00 39.32 3.86
165 166 1.446272 GAAGACCGAACGGCTGGAG 60.446 63.158 13.32 0.00 39.32 3.86
166 167 1.874345 GAAGACCGAACGGCTGGAGA 61.874 60.000 13.32 0.00 39.32 3.71
167 168 1.258445 AAGACCGAACGGCTGGAGAT 61.258 55.000 13.32 0.00 39.32 2.75
168 169 1.519455 GACCGAACGGCTGGAGATG 60.519 63.158 13.32 0.00 39.32 2.90
169 170 2.892425 CCGAACGGCTGGAGATGC 60.892 66.667 0.00 0.00 0.00 3.91
170 171 2.185350 CGAACGGCTGGAGATGCT 59.815 61.111 0.00 0.00 0.00 3.79
171 172 1.880340 CGAACGGCTGGAGATGCTC 60.880 63.158 0.00 0.00 0.00 4.26
172 173 1.519719 GAACGGCTGGAGATGCTCT 59.480 57.895 0.00 0.00 0.00 4.09
173 174 0.107945 GAACGGCTGGAGATGCTCTT 60.108 55.000 0.00 0.00 0.00 2.85
174 175 1.137086 GAACGGCTGGAGATGCTCTTA 59.863 52.381 0.00 0.00 0.00 2.10
175 176 0.749649 ACGGCTGGAGATGCTCTTAG 59.250 55.000 0.00 0.00 0.00 2.18
176 177 0.599728 CGGCTGGAGATGCTCTTAGC 60.600 60.000 12.47 12.47 42.82 3.09
177 178 0.758123 GGCTGGAGATGCTCTTAGCT 59.242 55.000 17.10 0.00 42.97 3.32
178 179 1.140652 GGCTGGAGATGCTCTTAGCTT 59.859 52.381 17.10 0.00 42.97 3.74
179 180 2.211806 GCTGGAGATGCTCTTAGCTTG 58.788 52.381 0.00 0.00 42.97 4.01
180 181 2.419851 GCTGGAGATGCTCTTAGCTTGT 60.420 50.000 0.00 0.00 42.97 3.16
181 182 3.181471 GCTGGAGATGCTCTTAGCTTGTA 60.181 47.826 0.00 0.00 42.97 2.41
182 183 4.619973 CTGGAGATGCTCTTAGCTTGTAG 58.380 47.826 0.00 0.00 42.97 2.74
183 184 4.281657 TGGAGATGCTCTTAGCTTGTAGA 58.718 43.478 0.00 0.00 42.97 2.59
184 185 4.711846 TGGAGATGCTCTTAGCTTGTAGAA 59.288 41.667 0.00 0.00 42.97 2.10
185 186 5.047188 GGAGATGCTCTTAGCTTGTAGAAC 58.953 45.833 0.00 0.00 42.97 3.01
186 187 5.394663 GGAGATGCTCTTAGCTTGTAGAACA 60.395 44.000 0.00 0.00 42.97 3.18
187 188 6.042638 AGATGCTCTTAGCTTGTAGAACAA 57.957 37.500 0.00 0.00 42.97 2.83
188 189 6.648192 AGATGCTCTTAGCTTGTAGAACAAT 58.352 36.000 0.00 0.00 42.97 2.71
189 190 6.538021 AGATGCTCTTAGCTTGTAGAACAATG 59.462 38.462 0.00 0.00 42.97 2.82
190 191 5.793817 TGCTCTTAGCTTGTAGAACAATGA 58.206 37.500 0.00 0.00 42.97 2.57
191 192 5.871524 TGCTCTTAGCTTGTAGAACAATGAG 59.128 40.000 0.00 0.00 42.97 2.90
192 193 6.102663 GCTCTTAGCTTGTAGAACAATGAGA 58.897 40.000 0.00 0.00 37.48 3.27
193 194 6.255453 GCTCTTAGCTTGTAGAACAATGAGAG 59.745 42.308 0.00 9.25 37.48 3.20
194 195 7.233389 TCTTAGCTTGTAGAACAATGAGAGT 57.767 36.000 0.00 0.00 37.48 3.24
195 196 7.671302 TCTTAGCTTGTAGAACAATGAGAGTT 58.329 34.615 0.00 0.00 37.48 3.01
196 197 7.600375 TCTTAGCTTGTAGAACAATGAGAGTTG 59.400 37.037 0.00 0.00 37.48 3.16
197 198 4.999950 AGCTTGTAGAACAATGAGAGTTGG 59.000 41.667 0.00 0.00 37.48 3.77
198 199 4.757149 GCTTGTAGAACAATGAGAGTTGGT 59.243 41.667 0.00 0.00 37.48 3.67
199 200 5.239525 GCTTGTAGAACAATGAGAGTTGGTT 59.760 40.000 0.00 0.00 37.48 3.67
200 201 6.566753 GCTTGTAGAACAATGAGAGTTGGTTC 60.567 42.308 0.00 0.00 37.48 3.62
201 202 5.305585 TGTAGAACAATGAGAGTTGGTTCC 58.694 41.667 0.00 0.00 33.40 3.62
202 203 4.437682 AGAACAATGAGAGTTGGTTCCA 57.562 40.909 0.00 0.00 33.40 3.53
203 204 4.792068 AGAACAATGAGAGTTGGTTCCAA 58.208 39.130 0.00 0.00 33.40 3.53
204 205 5.200483 AGAACAATGAGAGTTGGTTCCAAA 58.800 37.500 5.81 0.00 33.40 3.28
205 206 4.918810 ACAATGAGAGTTGGTTCCAAAC 57.081 40.909 5.81 4.28 33.40 2.93
206 207 4.277476 ACAATGAGAGTTGGTTCCAAACA 58.723 39.130 5.81 5.45 33.40 2.83
207 208 4.097892 ACAATGAGAGTTGGTTCCAAACAC 59.902 41.667 5.81 3.86 33.40 3.32
208 209 3.644966 TGAGAGTTGGTTCCAAACACT 57.355 42.857 5.81 6.10 0.00 3.55
209 210 4.764050 TGAGAGTTGGTTCCAAACACTA 57.236 40.909 5.81 0.00 0.00 2.74
210 211 5.304686 TGAGAGTTGGTTCCAAACACTAT 57.695 39.130 5.81 0.00 0.00 2.12
211 212 5.690865 TGAGAGTTGGTTCCAAACACTATT 58.309 37.500 5.81 0.00 0.00 1.73
212 213 6.126409 TGAGAGTTGGTTCCAAACACTATTT 58.874 36.000 5.81 0.00 0.00 1.40
213 214 6.605594 TGAGAGTTGGTTCCAAACACTATTTT 59.394 34.615 5.81 0.00 0.00 1.82
214 215 7.123547 TGAGAGTTGGTTCCAAACACTATTTTT 59.876 33.333 5.81 0.00 0.00 1.94
215 216 7.264947 AGAGTTGGTTCCAAACACTATTTTTG 58.735 34.615 5.81 0.00 34.31 2.44
216 217 5.815222 AGTTGGTTCCAAACACTATTTTTGC 59.185 36.000 5.81 0.00 33.37 3.68
217 218 4.698575 TGGTTCCAAACACTATTTTTGCC 58.301 39.130 0.00 0.00 33.37 4.52
218 219 4.162320 TGGTTCCAAACACTATTTTTGCCA 59.838 37.500 0.00 0.00 33.37 4.92
219 220 5.163258 TGGTTCCAAACACTATTTTTGCCAT 60.163 36.000 0.00 0.00 33.37 4.40
220 221 5.762711 GGTTCCAAACACTATTTTTGCCATT 59.237 36.000 0.00 0.00 33.37 3.16
221 222 6.262049 GGTTCCAAACACTATTTTTGCCATTT 59.738 34.615 0.00 0.00 33.37 2.32
222 223 6.857777 TCCAAACACTATTTTTGCCATTTG 57.142 33.333 0.00 0.00 33.37 2.32
223 224 5.762218 TCCAAACACTATTTTTGCCATTTGG 59.238 36.000 6.15 6.15 43.99 3.28
224 225 5.762218 CCAAACACTATTTTTGCCATTTGGA 59.238 36.000 6.57 0.00 44.94 3.53
225 226 6.261826 CCAAACACTATTTTTGCCATTTGGAA 59.738 34.615 6.57 0.00 44.94 3.53
226 227 6.859420 AACACTATTTTTGCCATTTGGAAC 57.141 33.333 0.00 0.00 37.39 3.62
227 228 6.173427 ACACTATTTTTGCCATTTGGAACT 57.827 33.333 0.00 0.00 37.39 3.01
228 229 7.296628 ACACTATTTTTGCCATTTGGAACTA 57.703 32.000 0.00 0.00 37.39 2.24
229 230 7.378181 ACACTATTTTTGCCATTTGGAACTAG 58.622 34.615 0.00 0.00 37.39 2.57
230 231 7.015195 ACACTATTTTTGCCATTTGGAACTAGT 59.985 33.333 0.00 0.00 37.39 2.57
231 232 8.519526 CACTATTTTTGCCATTTGGAACTAGTA 58.480 33.333 0.00 0.00 37.39 1.82
232 233 9.255029 ACTATTTTTGCCATTTGGAACTAGTAT 57.745 29.630 0.00 0.00 37.39 2.12
235 236 8.600449 TTTTTGCCATTTGGAACTAGTATTTG 57.400 30.769 0.00 0.00 37.39 2.32
236 237 5.913137 TGCCATTTGGAACTAGTATTTGG 57.087 39.130 0.00 0.00 37.39 3.28
237 238 4.159506 TGCCATTTGGAACTAGTATTTGGC 59.840 41.667 18.08 18.08 45.63 4.52
238 239 4.441495 GCCATTTGGAACTAGTATTTGGCC 60.441 45.833 15.73 0.00 40.90 5.36
239 240 4.709397 CCATTTGGAACTAGTATTTGGCCA 59.291 41.667 0.00 0.00 37.39 5.36
240 241 5.363580 CCATTTGGAACTAGTATTTGGCCAT 59.636 40.000 6.09 0.00 37.39 4.40
241 242 6.549364 CCATTTGGAACTAGTATTTGGCCATA 59.451 38.462 6.09 0.57 37.39 2.74
242 243 7.233348 CCATTTGGAACTAGTATTTGGCCATAT 59.767 37.037 6.09 10.69 37.39 1.78
243 244 9.295825 CATTTGGAACTAGTATTTGGCCATATA 57.704 33.333 6.09 9.42 0.00 0.86
245 246 9.875708 TTTGGAACTAGTATTTGGCCATATATT 57.124 29.630 17.52 15.71 0.00 1.28
246 247 8.862325 TGGAACTAGTATTTGGCCATATATTG 57.138 34.615 17.52 12.91 0.00 1.90
247 248 8.444783 TGGAACTAGTATTTGGCCATATATTGT 58.555 33.333 17.52 13.42 0.00 2.71
248 249 8.730680 GGAACTAGTATTTGGCCATATATTGTG 58.269 37.037 17.52 12.96 0.00 3.33
249 250 8.635765 AACTAGTATTTGGCCATATATTGTGG 57.364 34.615 17.52 10.61 39.80 4.17
250 251 7.984475 ACTAGTATTTGGCCATATATTGTGGA 58.016 34.615 17.52 0.17 39.12 4.02
251 252 8.614814 ACTAGTATTTGGCCATATATTGTGGAT 58.385 33.333 17.52 3.43 39.12 3.41
252 253 7.707624 AGTATTTGGCCATATATTGTGGATG 57.292 36.000 17.52 0.00 39.12 3.51
253 254 7.240897 AGTATTTGGCCATATATTGTGGATGT 58.759 34.615 17.52 0.00 39.12 3.06
254 255 6.594788 ATTTGGCCATATATTGTGGATGTC 57.405 37.500 6.09 0.00 39.12 3.06
255 256 4.032960 TGGCCATATATTGTGGATGTCC 57.967 45.455 0.00 0.00 39.12 4.02
256 257 3.657239 TGGCCATATATTGTGGATGTCCT 59.343 43.478 0.00 0.00 39.12 3.85
257 258 4.849235 TGGCCATATATTGTGGATGTCCTA 59.151 41.667 0.00 0.00 39.12 2.94
258 259 5.311913 TGGCCATATATTGTGGATGTCCTAA 59.688 40.000 0.00 0.00 39.12 2.69
259 260 6.183361 TGGCCATATATTGTGGATGTCCTAAA 60.183 38.462 0.00 0.00 39.12 1.85
260 261 6.891908 GGCCATATATTGTGGATGTCCTAAAT 59.108 38.462 0.00 3.41 39.12 1.40
261 262 7.148018 GGCCATATATTGTGGATGTCCTAAATG 60.148 40.741 0.00 0.00 39.12 2.32
262 263 7.394359 GCCATATATTGTGGATGTCCTAAATGT 59.606 37.037 10.19 2.21 39.12 2.71
263 264 8.950210 CCATATATTGTGGATGTCCTAAATGTC 58.050 37.037 0.09 0.00 39.12 3.06
264 265 9.506018 CATATATTGTGGATGTCCTAAATGTCA 57.494 33.333 0.09 0.00 36.82 3.58
266 267 8.821686 ATATTGTGGATGTCCTAAATGTCAAA 57.178 30.769 0.09 0.00 36.82 2.69
267 268 6.968263 TTGTGGATGTCCTAAATGTCAAAA 57.032 33.333 0.09 0.00 36.82 2.44
268 269 6.968263 TGTGGATGTCCTAAATGTCAAAAA 57.032 33.333 0.09 0.00 36.82 1.94
269 270 6.744112 TGTGGATGTCCTAAATGTCAAAAAC 58.256 36.000 0.09 0.00 36.82 2.43
270 271 6.322456 TGTGGATGTCCTAAATGTCAAAAACA 59.678 34.615 0.09 0.00 38.54 2.83
271 272 6.863126 GTGGATGTCCTAAATGTCAAAAACAG 59.137 38.462 0.09 0.00 37.93 3.16
272 273 6.549364 TGGATGTCCTAAATGTCAAAAACAGT 59.451 34.615 0.09 0.00 37.93 3.55
273 274 7.084486 GGATGTCCTAAATGTCAAAAACAGTC 58.916 38.462 0.00 0.00 42.37 3.51
274 275 6.055231 TGTCCTAAATGTCAAAAACAGTCG 57.945 37.500 0.00 0.00 42.37 4.18
275 276 4.909880 GTCCTAAATGTCAAAAACAGTCGC 59.090 41.667 0.00 0.00 42.37 5.19
276 277 4.023536 TCCTAAATGTCAAAAACAGTCGCC 60.024 41.667 0.00 0.00 42.37 5.54
277 278 2.793278 AATGTCAAAAACAGTCGCCC 57.207 45.000 0.00 0.00 42.37 6.13
278 279 0.958822 ATGTCAAAAACAGTCGCCCC 59.041 50.000 0.00 0.00 42.37 5.80
279 280 1.281656 GTCAAAAACAGTCGCCCCG 59.718 57.895 0.00 0.00 0.00 5.73
280 281 1.146485 TCAAAAACAGTCGCCCCGA 59.854 52.632 0.00 0.00 0.00 5.14
281 282 0.250553 TCAAAAACAGTCGCCCCGAT 60.251 50.000 0.00 0.00 38.42 4.18
282 283 0.596082 CAAAAACAGTCGCCCCGATT 59.404 50.000 0.00 0.00 38.42 3.34
283 284 1.000717 CAAAAACAGTCGCCCCGATTT 60.001 47.619 0.00 0.00 38.42 2.17
284 285 2.188062 AAAACAGTCGCCCCGATTTA 57.812 45.000 0.00 0.00 38.42 1.40
285 286 1.445871 AAACAGTCGCCCCGATTTAC 58.554 50.000 0.00 0.00 38.42 2.01
286 287 0.392060 AACAGTCGCCCCGATTTACC 60.392 55.000 0.00 0.00 38.42 2.85
287 288 1.219664 CAGTCGCCCCGATTTACCA 59.780 57.895 0.00 0.00 38.42 3.25
288 289 0.391927 CAGTCGCCCCGATTTACCAA 60.392 55.000 0.00 0.00 38.42 3.67
289 290 0.544697 AGTCGCCCCGATTTACCAAT 59.455 50.000 0.00 0.00 38.42 3.16
290 291 1.764134 AGTCGCCCCGATTTACCAATA 59.236 47.619 0.00 0.00 38.42 1.90
291 292 2.370849 AGTCGCCCCGATTTACCAATAT 59.629 45.455 0.00 0.00 38.42 1.28
292 293 3.143728 GTCGCCCCGATTTACCAATATT 58.856 45.455 0.00 0.00 38.42 1.28
293 294 3.566742 GTCGCCCCGATTTACCAATATTT 59.433 43.478 0.00 0.00 38.42 1.40
294 295 3.816523 TCGCCCCGATTTACCAATATTTC 59.183 43.478 0.00 0.00 0.00 2.17
295 296 3.818773 CGCCCCGATTTACCAATATTTCT 59.181 43.478 0.00 0.00 0.00 2.52
296 297 4.277423 CGCCCCGATTTACCAATATTTCTT 59.723 41.667 0.00 0.00 0.00 2.52
297 298 5.221165 CGCCCCGATTTACCAATATTTCTTT 60.221 40.000 0.00 0.00 0.00 2.52
298 299 6.213677 GCCCCGATTTACCAATATTTCTTTC 58.786 40.000 0.00 0.00 0.00 2.62
299 300 6.737622 GCCCCGATTTACCAATATTTCTTTCC 60.738 42.308 0.00 0.00 0.00 3.13
300 301 6.239204 CCCCGATTTACCAATATTTCTTTCCC 60.239 42.308 0.00 0.00 0.00 3.97
301 302 6.549736 CCCGATTTACCAATATTTCTTTCCCT 59.450 38.462 0.00 0.00 0.00 4.20
302 303 7.255486 CCCGATTTACCAATATTTCTTTCCCTC 60.255 40.741 0.00 0.00 0.00 4.30
303 304 7.502561 CCGATTTACCAATATTTCTTTCCCTCT 59.497 37.037 0.00 0.00 0.00 3.69
304 305 8.903820 CGATTTACCAATATTTCTTTCCCTCTT 58.096 33.333 0.00 0.00 0.00 2.85
307 308 8.589701 TTACCAATATTTCTTTCCCTCTTTCC 57.410 34.615 0.00 0.00 0.00 3.13
308 309 5.958380 ACCAATATTTCTTTCCCTCTTTCCC 59.042 40.000 0.00 0.00 0.00 3.97
309 310 6.197903 CCAATATTTCTTTCCCTCTTTCCCT 58.802 40.000 0.00 0.00 0.00 4.20
310 311 7.036132 ACCAATATTTCTTTCCCTCTTTCCCTA 60.036 37.037 0.00 0.00 0.00 3.53
311 312 8.007153 CCAATATTTCTTTCCCTCTTTCCCTAT 58.993 37.037 0.00 0.00 0.00 2.57
312 313 9.072375 CAATATTTCTTTCCCTCTTTCCCTATC 57.928 37.037 0.00 0.00 0.00 2.08
313 314 5.452341 TTTCTTTCCCTCTTTCCCTATCC 57.548 43.478 0.00 0.00 0.00 2.59
314 315 3.394645 TCTTTCCCTCTTTCCCTATCCC 58.605 50.000 0.00 0.00 0.00 3.85
315 316 3.015275 TCTTTCCCTCTTTCCCTATCCCT 59.985 47.826 0.00 0.00 0.00 4.20
316 317 4.236821 TCTTTCCCTCTTTCCCTATCCCTA 59.763 45.833 0.00 0.00 0.00 3.53
317 318 4.871806 TTCCCTCTTTCCCTATCCCTAT 57.128 45.455 0.00 0.00 0.00 2.57
318 319 4.421574 TCCCTCTTTCCCTATCCCTATC 57.578 50.000 0.00 0.00 0.00 2.08
319 320 3.079226 TCCCTCTTTCCCTATCCCTATCC 59.921 52.174 0.00 0.00 0.00 2.59
320 321 3.455849 CCTCTTTCCCTATCCCTATCCC 58.544 54.545 0.00 0.00 0.00 3.85
321 322 3.079843 CCTCTTTCCCTATCCCTATCCCT 59.920 52.174 0.00 0.00 0.00 4.20
322 323 4.297935 CCTCTTTCCCTATCCCTATCCCTA 59.702 50.000 0.00 0.00 0.00 3.53
323 324 5.042218 CCTCTTTCCCTATCCCTATCCCTAT 60.042 48.000 0.00 0.00 0.00 2.57
324 325 6.106407 TCTTTCCCTATCCCTATCCCTATC 57.894 45.833 0.00 0.00 0.00 2.08
325 326 4.920781 TTCCCTATCCCTATCCCTATCC 57.079 50.000 0.00 0.00 0.00 2.59
326 327 3.148331 TCCCTATCCCTATCCCTATCCC 58.852 54.545 0.00 0.00 0.00 3.85
327 328 3.151634 CCCTATCCCTATCCCTATCCCT 58.848 54.545 0.00 0.00 0.00 4.20
328 329 4.011682 TCCCTATCCCTATCCCTATCCCTA 60.012 50.000 0.00 0.00 0.00 3.53
329 330 4.935840 CCCTATCCCTATCCCTATCCCTAT 59.064 50.000 0.00 0.00 0.00 2.57
330 331 6.113162 CCCTATCCCTATCCCTATCCCTATA 58.887 48.000 0.00 0.00 0.00 1.31
331 332 6.752639 CCCTATCCCTATCCCTATCCCTATAT 59.247 46.154 0.00 0.00 0.00 0.86
332 333 7.923867 CCCTATCCCTATCCCTATCCCTATATA 59.076 44.444 0.00 0.00 0.00 0.86
333 334 9.555083 CCTATCCCTATCCCTATCCCTATATAT 57.445 40.741 0.00 0.00 0.00 0.86
593 596 2.518349 CACCCTGCACCACCGTTT 60.518 61.111 0.00 0.00 0.00 3.60
676 679 1.963338 GAGCTCCTTGTTGTGCGCT 60.963 57.895 9.73 0.00 0.00 5.92
1761 2507 1.669604 TGGTCGCACAAGCAGTTTTA 58.330 45.000 0.00 0.00 42.27 1.52
1927 2675 3.821600 GCAATTCATGGATCATGCTCTCT 59.178 43.478 3.72 0.00 41.18 3.10
1928 2676 4.083217 GCAATTCATGGATCATGCTCTCTC 60.083 45.833 3.72 0.00 41.18 3.20
1985 2734 8.197592 TCAGAAAACAGAACCCTACATAGTTA 57.802 34.615 0.00 0.00 0.00 2.24
5136 6063 3.055891 GTCCTGCTTTATGTTGCCCAATT 60.056 43.478 0.00 0.00 0.00 2.32
5169 6096 4.022242 GCCATCCTTTCGTAGTGATAGCTA 60.022 45.833 0.00 0.00 0.00 3.32
5227 6168 2.238646 TCAAGGGCCTTGTATGTCGATT 59.761 45.455 37.83 2.95 41.66 3.34
5246 6187 0.320374 TTGGAGCCAGTGTAAGTCGG 59.680 55.000 0.00 0.00 0.00 4.79
5431 6380 4.679662 CACGGGTGTTGTCCTAGTATAAG 58.320 47.826 0.00 0.00 0.00 1.73
5432 6381 4.400251 CACGGGTGTTGTCCTAGTATAAGA 59.600 45.833 0.00 0.00 0.00 2.10
5433 6382 5.068723 CACGGGTGTTGTCCTAGTATAAGAT 59.931 44.000 0.00 0.00 0.00 2.40
5434 6383 6.263842 CACGGGTGTTGTCCTAGTATAAGATA 59.736 42.308 0.00 0.00 0.00 1.98
5435 6384 6.835488 ACGGGTGTTGTCCTAGTATAAGATAA 59.165 38.462 0.00 0.00 0.00 1.75
5436 6385 7.144000 CGGGTGTTGTCCTAGTATAAGATAAC 58.856 42.308 0.00 0.00 33.67 1.89
5437 6386 7.144000 GGGTGTTGTCCTAGTATAAGATAACG 58.856 42.308 0.00 0.00 35.21 3.18
5438 6387 6.640092 GGTGTTGTCCTAGTATAAGATAACGC 59.360 42.308 9.21 9.21 39.76 4.84
5439 6388 6.640092 GTGTTGTCCTAGTATAAGATAACGCC 59.360 42.308 7.44 0.00 36.63 5.68
5440 6389 6.548622 TGTTGTCCTAGTATAAGATAACGCCT 59.451 38.462 0.00 0.00 35.21 5.52
5441 6390 6.814506 TGTCCTAGTATAAGATAACGCCTC 57.185 41.667 0.00 0.00 0.00 4.70
5442 6391 5.410746 TGTCCTAGTATAAGATAACGCCTCG 59.589 44.000 0.00 0.00 0.00 4.63
5443 6392 5.411053 GTCCTAGTATAAGATAACGCCTCGT 59.589 44.000 0.00 0.00 43.97 4.18
5444 6393 5.641209 TCCTAGTATAAGATAACGCCTCGTC 59.359 44.000 0.00 0.00 39.99 4.20
5445 6394 5.642919 CCTAGTATAAGATAACGCCTCGTCT 59.357 44.000 0.00 0.00 39.99 4.18
5446 6395 5.610235 AGTATAAGATAACGCCTCGTCTC 57.390 43.478 0.00 0.00 39.99 3.36
5447 6396 3.919223 ATAAGATAACGCCTCGTCTCC 57.081 47.619 0.00 0.00 39.99 3.71
5448 6397 1.471119 AAGATAACGCCTCGTCTCCA 58.529 50.000 0.00 0.00 39.99 3.86
5449 6398 1.471119 AGATAACGCCTCGTCTCCAA 58.529 50.000 0.00 0.00 39.99 3.53
5450 6399 1.405821 AGATAACGCCTCGTCTCCAAG 59.594 52.381 0.00 0.00 39.99 3.61
5451 6400 1.404391 GATAACGCCTCGTCTCCAAGA 59.596 52.381 0.00 0.00 39.99 3.02
5452 6401 1.471119 TAACGCCTCGTCTCCAAGAT 58.529 50.000 0.00 0.00 39.99 2.40
5453 6402 1.471119 AACGCCTCGTCTCCAAGATA 58.529 50.000 0.00 0.00 39.99 1.98
5454 6403 1.693627 ACGCCTCGTCTCCAAGATAT 58.306 50.000 0.00 0.00 33.69 1.63
5455 6404 2.032620 ACGCCTCGTCTCCAAGATATT 58.967 47.619 0.00 0.00 33.69 1.28
5456 6405 2.223829 ACGCCTCGTCTCCAAGATATTG 60.224 50.000 0.00 0.00 33.69 1.90
5457 6406 2.139118 GCCTCGTCTCCAAGATATTGC 58.861 52.381 0.00 0.00 0.00 3.56
5458 6407 2.483714 GCCTCGTCTCCAAGATATTGCA 60.484 50.000 0.00 0.00 0.00 4.08
5459 6408 3.797039 CCTCGTCTCCAAGATATTGCAA 58.203 45.455 0.00 0.00 0.00 4.08
5460 6409 4.191544 CCTCGTCTCCAAGATATTGCAAA 58.808 43.478 1.71 0.00 0.00 3.68
5461 6410 4.818546 CCTCGTCTCCAAGATATTGCAAAT 59.181 41.667 1.71 0.00 0.00 2.32
5462 6411 5.277683 CCTCGTCTCCAAGATATTGCAAATG 60.278 44.000 1.71 0.00 0.00 2.32
5463 6412 5.185454 TCGTCTCCAAGATATTGCAAATGT 58.815 37.500 1.71 0.00 0.00 2.71
5464 6413 5.065090 TCGTCTCCAAGATATTGCAAATGTG 59.935 40.000 1.71 0.00 0.00 3.21
5465 6414 5.585390 GTCTCCAAGATATTGCAAATGTGG 58.415 41.667 1.71 7.41 0.00 4.17
5466 6415 5.126061 GTCTCCAAGATATTGCAAATGTGGT 59.874 40.000 1.71 0.00 0.00 4.16
5467 6416 5.716228 TCTCCAAGATATTGCAAATGTGGTT 59.284 36.000 1.71 0.00 0.00 3.67
5468 6417 5.722263 TCCAAGATATTGCAAATGTGGTTG 58.278 37.500 1.71 3.12 0.00 3.77
5469 6418 5.479724 TCCAAGATATTGCAAATGTGGTTGA 59.520 36.000 1.71 0.00 0.00 3.18
5470 6419 5.808540 CCAAGATATTGCAAATGTGGTTGAG 59.191 40.000 1.71 0.00 0.00 3.02
5471 6420 5.587388 AGATATTGCAAATGTGGTTGAGG 57.413 39.130 1.71 0.00 0.00 3.86
5472 6421 2.460757 ATTGCAAATGTGGTTGAGGC 57.539 45.000 1.71 0.00 0.00 4.70
5473 6422 0.392336 TTGCAAATGTGGTTGAGGCC 59.608 50.000 0.00 0.00 0.00 5.19
5474 6423 1.293179 GCAAATGTGGTTGAGGCCC 59.707 57.895 0.00 0.00 0.00 5.80
5475 6424 1.470996 GCAAATGTGGTTGAGGCCCA 61.471 55.000 0.00 0.00 0.00 5.36
5476 6425 1.047002 CAAATGTGGTTGAGGCCCAA 58.953 50.000 0.00 0.00 32.72 4.12
5477 6426 1.415659 CAAATGTGGTTGAGGCCCAAA 59.584 47.619 0.00 0.00 36.36 3.28
5478 6427 2.028561 AATGTGGTTGAGGCCCAAAT 57.971 45.000 0.00 0.00 36.36 2.32
5479 6428 2.917713 ATGTGGTTGAGGCCCAAATA 57.082 45.000 0.00 0.00 36.36 1.40
5480 6429 2.214376 TGTGGTTGAGGCCCAAATAG 57.786 50.000 0.00 0.00 36.36 1.73
5481 6430 0.817654 GTGGTTGAGGCCCAAATAGC 59.182 55.000 0.00 0.00 36.36 2.97
5482 6431 0.679640 TGGTTGAGGCCCAAATAGCG 60.680 55.000 0.00 0.00 36.36 4.26
5483 6432 0.393808 GGTTGAGGCCCAAATAGCGA 60.394 55.000 0.00 0.00 36.36 4.93
5484 6433 0.733150 GTTGAGGCCCAAATAGCGAC 59.267 55.000 0.00 0.00 36.36 5.19
5485 6434 0.393808 TTGAGGCCCAAATAGCGACC 60.394 55.000 0.00 0.00 0.00 4.79
5486 6435 1.223487 GAGGCCCAAATAGCGACCA 59.777 57.895 0.00 0.00 0.00 4.02
5487 6436 0.179018 GAGGCCCAAATAGCGACCAT 60.179 55.000 0.00 0.00 0.00 3.55
5488 6437 0.466189 AGGCCCAAATAGCGACCATG 60.466 55.000 0.00 0.00 0.00 3.66
5489 6438 1.455383 GGCCCAAATAGCGACCATGG 61.455 60.000 11.19 11.19 0.00 3.66
5490 6439 0.465460 GCCCAAATAGCGACCATGGA 60.465 55.000 21.47 0.00 32.82 3.41
5491 6440 1.597742 CCCAAATAGCGACCATGGAG 58.402 55.000 21.47 13.19 32.82 3.86
5492 6441 1.597742 CCAAATAGCGACCATGGAGG 58.402 55.000 21.47 10.69 45.67 4.30
5493 6442 1.140852 CCAAATAGCGACCATGGAGGA 59.859 52.381 21.47 0.00 41.22 3.71
5494 6443 2.487934 CAAATAGCGACCATGGAGGAG 58.512 52.381 21.47 7.43 41.22 3.69
5495 6444 1.051812 AATAGCGACCATGGAGGAGG 58.948 55.000 21.47 3.32 41.22 4.30
5496 6445 0.833834 ATAGCGACCATGGAGGAGGG 60.834 60.000 21.47 1.46 41.22 4.30
5497 6446 4.554036 GCGACCATGGAGGAGGGC 62.554 72.222 21.47 8.13 41.22 5.19
5498 6447 3.866582 CGACCATGGAGGAGGGCC 61.867 72.222 21.47 0.00 41.22 5.80
5507 6456 2.040278 AGGAGGGCCTCAGTCTGG 59.960 66.667 33.27 0.00 42.19 3.86
5525 6474 4.929807 CATTGTATGCCCCCTCCC 57.070 61.111 0.00 0.00 0.00 4.30
5526 6475 1.153756 CATTGTATGCCCCCTCCCC 59.846 63.158 0.00 0.00 0.00 4.81
5527 6476 2.091283 ATTGTATGCCCCCTCCCCC 61.091 63.158 0.00 0.00 0.00 5.40
5538 6487 3.610669 CTCCCCCGGCAGATCGAG 61.611 72.222 0.00 0.00 0.00 4.04
5541 6490 2.520982 CCCCGGCAGATCGAGGTA 60.521 66.667 0.00 0.00 0.00 3.08
5542 6491 2.565645 CCCCGGCAGATCGAGGTAG 61.566 68.421 0.00 0.00 0.00 3.18
5543 6492 1.528542 CCCGGCAGATCGAGGTAGA 60.529 63.158 0.00 0.00 0.00 2.59
5544 6493 0.896019 CCCGGCAGATCGAGGTAGAT 60.896 60.000 0.00 0.00 0.00 1.98
5545 6494 1.613520 CCCGGCAGATCGAGGTAGATA 60.614 57.143 0.00 0.00 0.00 1.98
5546 6495 1.469308 CCGGCAGATCGAGGTAGATAC 59.531 57.143 0.00 0.00 0.00 2.24
5547 6496 2.152016 CGGCAGATCGAGGTAGATACA 58.848 52.381 0.00 0.00 0.00 2.29
5548 6497 2.750166 CGGCAGATCGAGGTAGATACAT 59.250 50.000 0.00 0.00 0.00 2.29
5549 6498 3.939592 CGGCAGATCGAGGTAGATACATA 59.060 47.826 0.00 0.00 0.00 2.29
5550 6499 4.576873 CGGCAGATCGAGGTAGATACATAT 59.423 45.833 0.00 0.00 0.00 1.78
5551 6500 5.504830 CGGCAGATCGAGGTAGATACATATG 60.505 48.000 0.00 0.00 0.00 1.78
5552 6501 5.590663 GGCAGATCGAGGTAGATACATATGA 59.409 44.000 10.38 0.00 0.00 2.15
5553 6502 6.459024 GGCAGATCGAGGTAGATACATATGAC 60.459 46.154 10.38 0.00 0.00 3.06
5554 6503 6.094186 GCAGATCGAGGTAGATACATATGACA 59.906 42.308 10.38 0.00 0.00 3.58
5555 6504 7.201776 GCAGATCGAGGTAGATACATATGACAT 60.202 40.741 10.38 1.87 0.00 3.06
5556 6505 8.127954 CAGATCGAGGTAGATACATATGACATG 58.872 40.741 10.38 0.00 0.00 3.21
5557 6506 6.759497 TCGAGGTAGATACATATGACATGG 57.241 41.667 10.38 0.00 0.00 3.66
5558 6507 6.481643 TCGAGGTAGATACATATGACATGGA 58.518 40.000 10.38 0.00 0.00 3.41
5559 6508 6.946009 TCGAGGTAGATACATATGACATGGAA 59.054 38.462 10.38 0.00 0.00 3.53
5560 6509 7.121315 TCGAGGTAGATACATATGACATGGAAG 59.879 40.741 10.38 0.00 0.00 3.46
5561 6510 6.940739 AGGTAGATACATATGACATGGAAGC 58.059 40.000 10.38 0.00 0.00 3.86
5562 6511 6.070538 AGGTAGATACATATGACATGGAAGCC 60.071 42.308 10.38 0.92 0.00 4.35
5563 6512 5.171339 AGATACATATGACATGGAAGCCC 57.829 43.478 10.38 0.00 0.00 5.19
5564 6513 4.848660 AGATACATATGACATGGAAGCCCT 59.151 41.667 10.38 0.00 0.00 5.19
5565 6514 3.498774 ACATATGACATGGAAGCCCTC 57.501 47.619 10.38 0.00 0.00 4.30
5566 6515 2.224378 ACATATGACATGGAAGCCCTCG 60.224 50.000 10.38 0.00 0.00 4.63
5567 6516 0.758734 TATGACATGGAAGCCCTCGG 59.241 55.000 0.00 0.00 0.00 4.63
5568 6517 1.987807 ATGACATGGAAGCCCTCGGG 61.988 60.000 0.00 0.00 38.57 5.14
5579 6528 2.212327 CCCTCGGGCTAGTGAATGT 58.788 57.895 0.00 0.00 0.00 2.71
5580 6529 0.105039 CCCTCGGGCTAGTGAATGTC 59.895 60.000 0.00 0.00 0.00 3.06
5581 6530 0.824109 CCTCGGGCTAGTGAATGTCA 59.176 55.000 0.00 0.00 0.00 3.58
5582 6531 1.207089 CCTCGGGCTAGTGAATGTCAA 59.793 52.381 0.00 0.00 0.00 3.18
5583 6532 2.544685 CTCGGGCTAGTGAATGTCAAG 58.455 52.381 0.00 0.00 0.00 3.02
5584 6533 2.166459 CTCGGGCTAGTGAATGTCAAGA 59.834 50.000 0.00 0.00 0.00 3.02
5585 6534 2.094182 TCGGGCTAGTGAATGTCAAGAC 60.094 50.000 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.309612 AAATCGGGCAAACACGACAC 59.690 50.000 0.00 0.00 42.39 3.67
2 3 1.681825 GAAAATCGGGCAAACACGAC 58.318 50.000 0.00 0.00 42.39 4.34
4 5 2.707192 CGAAAATCGGGCAAACACG 58.293 52.632 0.00 0.00 36.00 4.49
14 15 0.179200 CCAAACTCGGCCGAAAATCG 60.179 55.000 30.53 19.43 40.07 3.34
15 16 0.879090 ACCAAACTCGGCCGAAAATC 59.121 50.000 30.53 0.00 0.00 2.17
16 17 1.324383 AACCAAACTCGGCCGAAAAT 58.676 45.000 30.53 15.00 0.00 1.82
17 18 1.104630 AAACCAAACTCGGCCGAAAA 58.895 45.000 30.53 7.15 0.00 2.29
18 19 1.104630 AAAACCAAACTCGGCCGAAA 58.895 45.000 30.53 8.03 0.00 3.46
19 20 1.964552 TAAAACCAAACTCGGCCGAA 58.035 45.000 30.53 13.22 0.00 4.30
20 21 1.603326 GTTAAAACCAAACTCGGCCGA 59.397 47.619 29.03 29.03 0.00 5.54
21 22 1.334243 TGTTAAAACCAAACTCGGCCG 59.666 47.619 22.12 22.12 0.00 6.13
22 23 3.439895 TTGTTAAAACCAAACTCGGCC 57.560 42.857 0.00 0.00 0.00 6.13
23 24 5.552807 GTTTTTGTTAAAACCAAACTCGGC 58.447 37.500 0.00 0.00 44.69 5.54
34 35 5.725362 CCCCAGACACTGTTTTTGTTAAAA 58.275 37.500 0.00 0.00 0.00 1.52
35 36 4.382147 GCCCCAGACACTGTTTTTGTTAAA 60.382 41.667 0.00 0.00 0.00 1.52
36 37 3.131400 GCCCCAGACACTGTTTTTGTTAA 59.869 43.478 0.00 0.00 0.00 2.01
37 38 2.691011 GCCCCAGACACTGTTTTTGTTA 59.309 45.455 0.00 0.00 0.00 2.41
38 39 1.480545 GCCCCAGACACTGTTTTTGTT 59.519 47.619 0.00 0.00 0.00 2.83
39 40 1.111277 GCCCCAGACACTGTTTTTGT 58.889 50.000 0.00 0.00 0.00 2.83
40 41 0.030638 CGCCCCAGACACTGTTTTTG 59.969 55.000 0.00 0.00 0.00 2.44
41 42 0.106918 TCGCCCCAGACACTGTTTTT 60.107 50.000 0.00 0.00 0.00 1.94
42 43 0.818040 GTCGCCCCAGACACTGTTTT 60.818 55.000 0.00 0.00 40.65 2.43
43 44 1.227853 GTCGCCCCAGACACTGTTT 60.228 57.895 0.00 0.00 40.65 2.83
44 45 2.426023 GTCGCCCCAGACACTGTT 59.574 61.111 0.00 0.00 40.65 3.16
45 46 3.626924 GGTCGCCCCAGACACTGT 61.627 66.667 0.00 0.00 42.62 3.55
46 47 2.883828 AAGGTCGCCCCAGACACTG 61.884 63.158 0.00 0.00 42.62 3.66
47 48 2.526873 AAGGTCGCCCCAGACACT 60.527 61.111 0.00 0.00 42.62 3.55
48 49 2.358737 CAAGGTCGCCCCAGACAC 60.359 66.667 0.00 0.00 42.62 3.67
49 50 3.636231 CCAAGGTCGCCCCAGACA 61.636 66.667 0.00 0.00 42.62 3.41
50 51 4.410400 CCCAAGGTCGCCCCAGAC 62.410 72.222 0.00 0.00 40.25 3.51
70 71 4.700365 GTTGGTTTCGCAGCCGCC 62.700 66.667 0.00 0.00 33.11 6.13
71 72 3.660111 AGTTGGTTTCGCAGCCGC 61.660 61.111 0.00 0.00 0.00 6.53
72 73 2.252260 CAGTTGGTTTCGCAGCCG 59.748 61.111 0.00 0.00 0.00 5.52
73 74 2.050077 GCAGTTGGTTTCGCAGCC 60.050 61.111 0.00 0.00 0.00 4.85
74 75 2.050077 GGCAGTTGGTTTCGCAGC 60.050 61.111 0.00 0.00 0.00 5.25
75 76 2.644992 GGGCAGTTGGTTTCGCAG 59.355 61.111 0.00 0.00 0.00 5.18
76 77 2.909965 GGGGCAGTTGGTTTCGCA 60.910 61.111 0.00 0.00 0.00 5.10
77 78 3.680786 GGGGGCAGTTGGTTTCGC 61.681 66.667 0.00 0.00 0.00 4.70
78 79 2.203422 TGGGGGCAGTTGGTTTCG 60.203 61.111 0.00 0.00 0.00 3.46
79 80 2.561037 CGTGGGGGCAGTTGGTTTC 61.561 63.158 0.00 0.00 0.00 2.78
80 81 2.520741 CGTGGGGGCAGTTGGTTT 60.521 61.111 0.00 0.00 0.00 3.27
89 90 0.104120 GATAAATTTGGCGTGGGGGC 59.896 55.000 0.00 0.00 42.69 5.80
90 91 0.383949 CGATAAATTTGGCGTGGGGG 59.616 55.000 0.00 0.00 0.00 5.40
91 92 0.248866 GCGATAAATTTGGCGTGGGG 60.249 55.000 13.55 0.00 0.00 4.96
92 93 0.248866 GGCGATAAATTTGGCGTGGG 60.249 55.000 13.55 0.00 0.00 4.61
93 94 3.250220 GGCGATAAATTTGGCGTGG 57.750 52.632 13.55 0.00 0.00 4.94
97 98 1.835121 GAACCGGCGATAAATTTGGC 58.165 50.000 9.30 1.66 0.00 4.52
98 99 1.858399 GCGAACCGGCGATAAATTTGG 60.858 52.381 9.30 0.00 0.00 3.28
99 100 1.462791 GCGAACCGGCGATAAATTTG 58.537 50.000 9.30 0.00 0.00 2.32
100 101 0.379316 GGCGAACCGGCGATAAATTT 59.621 50.000 9.30 0.00 43.33 1.82
101 102 2.019337 GGCGAACCGGCGATAAATT 58.981 52.632 9.30 0.00 43.33 1.82
102 103 3.727146 GGCGAACCGGCGATAAAT 58.273 55.556 9.30 0.00 43.33 1.40
119 120 0.249868 TGAAATAGCGCCATCTCGGG 60.250 55.000 2.29 0.00 34.06 5.14
120 121 1.581934 TTGAAATAGCGCCATCTCGG 58.418 50.000 2.29 0.00 38.11 4.63
121 122 2.286418 GGTTTGAAATAGCGCCATCTCG 60.286 50.000 2.29 0.00 0.00 4.04
122 123 2.033424 GGGTTTGAAATAGCGCCATCTC 59.967 50.000 2.29 0.00 0.00 2.75
123 124 2.024414 GGGTTTGAAATAGCGCCATCT 58.976 47.619 2.29 0.00 0.00 2.90
124 125 1.067060 GGGGTTTGAAATAGCGCCATC 59.933 52.381 2.29 0.00 34.58 3.51
125 126 1.111277 GGGGTTTGAAATAGCGCCAT 58.889 50.000 2.29 0.00 34.58 4.40
126 127 0.968393 GGGGGTTTGAAATAGCGCCA 60.968 55.000 2.29 0.00 43.30 5.69
127 128 1.813859 GGGGGTTTGAAATAGCGCC 59.186 57.895 2.29 0.00 38.63 6.53
128 129 1.431845 CGGGGGTTTGAAATAGCGC 59.568 57.895 0.00 0.00 0.00 5.92
129 130 0.393267 TCCGGGGGTTTGAAATAGCG 60.393 55.000 0.00 0.00 0.00 4.26
130 131 1.749063 CTTCCGGGGGTTTGAAATAGC 59.251 52.381 0.00 0.00 0.00 2.97
131 132 3.014623 GTCTTCCGGGGGTTTGAAATAG 58.985 50.000 0.00 0.00 0.00 1.73
132 133 2.291089 GGTCTTCCGGGGGTTTGAAATA 60.291 50.000 0.00 0.00 0.00 1.40
133 134 1.549265 GGTCTTCCGGGGGTTTGAAAT 60.549 52.381 0.00 0.00 0.00 2.17
134 135 0.178984 GGTCTTCCGGGGGTTTGAAA 60.179 55.000 0.00 0.00 0.00 2.69
135 136 1.457165 GGTCTTCCGGGGGTTTGAA 59.543 57.895 0.00 0.00 0.00 2.69
136 137 3.163503 GGTCTTCCGGGGGTTTGA 58.836 61.111 0.00 0.00 0.00 2.69
146 147 2.434359 CCAGCCGTTCGGTCTTCC 60.434 66.667 12.81 0.00 0.00 3.46
147 148 1.446272 CTCCAGCCGTTCGGTCTTC 60.446 63.158 12.81 0.00 0.00 2.87
148 149 1.258445 ATCTCCAGCCGTTCGGTCTT 61.258 55.000 12.81 0.00 0.00 3.01
149 150 1.682684 ATCTCCAGCCGTTCGGTCT 60.683 57.895 12.81 7.58 0.00 3.85
150 151 1.519455 CATCTCCAGCCGTTCGGTC 60.519 63.158 12.81 5.49 0.00 4.79
151 152 2.579201 CATCTCCAGCCGTTCGGT 59.421 61.111 12.81 0.00 0.00 4.69
152 153 2.892425 GCATCTCCAGCCGTTCGG 60.892 66.667 6.90 6.90 0.00 4.30
153 154 1.880340 GAGCATCTCCAGCCGTTCG 60.880 63.158 0.00 0.00 0.00 3.95
154 155 4.116878 GAGCATCTCCAGCCGTTC 57.883 61.111 0.00 0.00 0.00 3.95
161 162 9.149466 TTGTTCTACAAGCTAAGAGCATCTCCA 62.149 40.741 9.84 0.00 45.56 3.86
162 163 6.850360 TTGTTCTACAAGCTAAGAGCATCTCC 60.850 42.308 9.84 0.00 45.56 3.71
163 164 6.102663 TTGTTCTACAAGCTAAGAGCATCTC 58.897 40.000 9.84 0.00 45.56 2.75
164 165 6.042638 TTGTTCTACAAGCTAAGAGCATCT 57.957 37.500 9.84 0.00 45.56 2.90
165 166 6.536582 TCATTGTTCTACAAGCTAAGAGCATC 59.463 38.462 9.84 0.00 45.56 3.91
166 167 6.409704 TCATTGTTCTACAAGCTAAGAGCAT 58.590 36.000 9.84 0.00 45.56 3.79
167 168 5.793817 TCATTGTTCTACAAGCTAAGAGCA 58.206 37.500 0.64 6.22 45.56 4.26
168 169 6.102663 TCTCATTGTTCTACAAGCTAAGAGC 58.897 40.000 0.00 0.00 41.94 4.09
169 170 7.319646 ACTCTCATTGTTCTACAAGCTAAGAG 58.680 38.462 14.74 14.74 41.94 2.85
170 171 7.233389 ACTCTCATTGTTCTACAAGCTAAGA 57.767 36.000 0.00 0.00 41.94 2.10
171 172 7.148507 CCAACTCTCATTGTTCTACAAGCTAAG 60.149 40.741 0.00 0.00 41.94 2.18
172 173 6.650807 CCAACTCTCATTGTTCTACAAGCTAA 59.349 38.462 0.00 0.00 41.94 3.09
173 174 6.166279 CCAACTCTCATTGTTCTACAAGCTA 58.834 40.000 0.00 0.00 41.94 3.32
174 175 4.999950 CCAACTCTCATTGTTCTACAAGCT 59.000 41.667 0.00 0.00 41.94 3.74
175 176 4.757149 ACCAACTCTCATTGTTCTACAAGC 59.243 41.667 0.00 0.00 41.94 4.01
176 177 6.073003 GGAACCAACTCTCATTGTTCTACAAG 60.073 42.308 0.00 0.00 41.94 3.16
177 178 5.763204 GGAACCAACTCTCATTGTTCTACAA 59.237 40.000 0.00 0.00 42.95 2.41
178 179 5.163248 TGGAACCAACTCTCATTGTTCTACA 60.163 40.000 0.00 0.00 0.00 2.74
179 180 5.305585 TGGAACCAACTCTCATTGTTCTAC 58.694 41.667 0.00 0.00 0.00 2.59
180 181 5.560722 TGGAACCAACTCTCATTGTTCTA 57.439 39.130 0.00 0.00 0.00 2.10
181 182 4.437682 TGGAACCAACTCTCATTGTTCT 57.562 40.909 0.00 0.00 0.00 3.01
182 183 5.163561 TGTTTGGAACCAACTCTCATTGTTC 60.164 40.000 5.73 0.00 35.46 3.18
183 184 4.709397 TGTTTGGAACCAACTCTCATTGTT 59.291 37.500 5.73 0.00 35.46 2.83
184 185 4.097892 GTGTTTGGAACCAACTCTCATTGT 59.902 41.667 5.73 0.00 35.46 2.71
185 186 4.339247 AGTGTTTGGAACCAACTCTCATTG 59.661 41.667 5.73 0.00 35.46 2.82
186 187 4.536765 AGTGTTTGGAACCAACTCTCATT 58.463 39.130 5.73 0.00 35.46 2.57
187 188 4.170468 AGTGTTTGGAACCAACTCTCAT 57.830 40.909 5.73 0.00 35.46 2.90
188 189 3.644966 AGTGTTTGGAACCAACTCTCA 57.355 42.857 5.73 1.78 35.46 3.27
189 190 6.635030 AAATAGTGTTTGGAACCAACTCTC 57.365 37.500 5.73 4.41 35.46 3.20
190 191 7.264947 CAAAAATAGTGTTTGGAACCAACTCT 58.735 34.615 5.73 9.73 35.46 3.24
191 192 6.019075 GCAAAAATAGTGTTTGGAACCAACTC 60.019 38.462 5.73 3.86 36.64 3.01
192 193 5.815222 GCAAAAATAGTGTTTGGAACCAACT 59.185 36.000 5.73 4.09 36.64 3.16
193 194 5.007234 GGCAAAAATAGTGTTTGGAACCAAC 59.993 40.000 5.73 3.11 36.64 3.77
194 195 5.119694 GGCAAAAATAGTGTTTGGAACCAA 58.880 37.500 1.83 1.83 36.64 3.67
195 196 4.162320 TGGCAAAAATAGTGTTTGGAACCA 59.838 37.500 0.00 0.00 36.64 3.67
196 197 4.698575 TGGCAAAAATAGTGTTTGGAACC 58.301 39.130 0.00 0.00 36.64 3.62
197 198 6.859420 AATGGCAAAAATAGTGTTTGGAAC 57.141 33.333 0.00 0.00 36.64 3.62
198 199 6.261826 CCAAATGGCAAAAATAGTGTTTGGAA 59.738 34.615 15.03 0.00 44.26 3.53
199 200 5.762218 CCAAATGGCAAAAATAGTGTTTGGA 59.238 36.000 15.03 0.00 44.26 3.53
200 201 5.762218 TCCAAATGGCAAAAATAGTGTTTGG 59.238 36.000 14.31 14.31 43.38 3.28
201 202 6.857777 TCCAAATGGCAAAAATAGTGTTTG 57.142 33.333 0.00 0.00 38.69 2.93
202 203 7.053498 AGTTCCAAATGGCAAAAATAGTGTTT 58.947 30.769 0.00 0.00 34.44 2.83
203 204 6.591001 AGTTCCAAATGGCAAAAATAGTGTT 58.409 32.000 0.00 0.00 34.44 3.32
204 205 6.173427 AGTTCCAAATGGCAAAAATAGTGT 57.827 33.333 0.00 0.00 34.44 3.55
205 206 7.378181 ACTAGTTCCAAATGGCAAAAATAGTG 58.622 34.615 10.05 0.00 32.65 2.74
206 207 7.539034 ACTAGTTCCAAATGGCAAAAATAGT 57.461 32.000 0.00 6.65 30.53 2.12
209 210 9.218440 CAAATACTAGTTCCAAATGGCAAAAAT 57.782 29.630 0.00 0.00 34.44 1.82
210 211 7.659390 CCAAATACTAGTTCCAAATGGCAAAAA 59.341 33.333 0.00 0.00 34.44 1.94
211 212 7.158021 CCAAATACTAGTTCCAAATGGCAAAA 58.842 34.615 0.00 0.00 34.44 2.44
212 213 6.696411 CCAAATACTAGTTCCAAATGGCAAA 58.304 36.000 0.00 0.00 34.44 3.68
213 214 6.279513 CCAAATACTAGTTCCAAATGGCAA 57.720 37.500 0.00 0.00 34.44 4.52
214 215 5.913137 CCAAATACTAGTTCCAAATGGCA 57.087 39.130 0.00 0.00 34.44 4.92
215 216 4.682787 GCCAAATACTAGTTCCAAATGGC 58.317 43.478 0.00 9.56 43.31 4.40
216 217 4.709397 TGGCCAAATACTAGTTCCAAATGG 59.291 41.667 0.61 3.27 0.00 3.16
217 218 5.913137 TGGCCAAATACTAGTTCCAAATG 57.087 39.130 0.61 0.00 0.00 2.32
219 220 9.875708 AATATATGGCCAAATACTAGTTCCAAA 57.124 29.630 10.96 0.00 0.00 3.28
220 221 9.295825 CAATATATGGCCAAATACTAGTTCCAA 57.704 33.333 10.96 0.00 0.00 3.53
221 222 8.444783 ACAATATATGGCCAAATACTAGTTCCA 58.555 33.333 10.96 0.11 0.00 3.53
222 223 8.730680 CACAATATATGGCCAAATACTAGTTCC 58.269 37.037 10.96 0.00 0.00 3.62
223 224 8.730680 CCACAATATATGGCCAAATACTAGTTC 58.269 37.037 10.96 0.00 0.00 3.01
224 225 8.444783 TCCACAATATATGGCCAAATACTAGTT 58.555 33.333 10.96 0.00 37.13 2.24
225 226 7.984475 TCCACAATATATGGCCAAATACTAGT 58.016 34.615 10.96 0.00 37.13 2.57
226 227 8.896744 CATCCACAATATATGGCCAAATACTAG 58.103 37.037 10.96 0.00 37.13 2.57
227 228 8.390143 ACATCCACAATATATGGCCAAATACTA 58.610 33.333 10.96 0.00 37.13 1.82
228 229 7.240897 ACATCCACAATATATGGCCAAATACT 58.759 34.615 10.96 0.00 37.13 2.12
229 230 7.362920 GGACATCCACAATATATGGCCAAATAC 60.363 40.741 10.96 0.00 46.41 1.89
230 231 6.663093 GGACATCCACAATATATGGCCAAATA 59.337 38.462 10.96 0.00 46.41 1.40
231 232 5.481473 GGACATCCACAATATATGGCCAAAT 59.519 40.000 10.96 0.14 46.41 2.32
232 233 4.832266 GGACATCCACAATATATGGCCAAA 59.168 41.667 10.96 0.00 46.41 3.28
233 234 4.406456 GGACATCCACAATATATGGCCAA 58.594 43.478 10.96 0.00 46.41 4.52
234 235 4.032960 GGACATCCACAATATATGGCCA 57.967 45.455 8.56 8.56 46.41 5.36
236 237 7.394359 ACATTTAGGACATCCACAATATATGGC 59.606 37.037 0.00 0.00 37.13 4.40
237 238 8.868522 ACATTTAGGACATCCACAATATATGG 57.131 34.615 0.00 0.23 38.89 2.74
238 239 9.506018 TGACATTTAGGACATCCACAATATATG 57.494 33.333 0.00 0.00 38.89 1.78
240 241 9.913310 TTTGACATTTAGGACATCCACAATATA 57.087 29.630 0.00 0.00 38.89 0.86
241 242 8.821686 TTTGACATTTAGGACATCCACAATAT 57.178 30.769 0.00 0.00 38.89 1.28
242 243 8.642935 TTTTGACATTTAGGACATCCACAATA 57.357 30.769 0.00 0.00 38.89 1.90
243 244 7.537596 TTTTGACATTTAGGACATCCACAAT 57.462 32.000 0.00 0.00 38.89 2.71
244 245 6.968263 TTTTGACATTTAGGACATCCACAA 57.032 33.333 0.00 0.00 38.89 3.33
245 246 6.322456 TGTTTTTGACATTTAGGACATCCACA 59.678 34.615 0.00 0.00 33.68 4.17
246 247 6.744112 TGTTTTTGACATTTAGGACATCCAC 58.256 36.000 0.00 0.00 33.68 4.02
247 248 6.549364 ACTGTTTTTGACATTTAGGACATCCA 59.451 34.615 0.00 0.00 37.69 3.41
248 249 6.981722 ACTGTTTTTGACATTTAGGACATCC 58.018 36.000 0.00 0.00 37.69 3.51
249 250 6.797033 CGACTGTTTTTGACATTTAGGACATC 59.203 38.462 0.00 0.00 37.69 3.06
250 251 6.668323 CGACTGTTTTTGACATTTAGGACAT 58.332 36.000 0.00 0.00 37.69 3.06
251 252 5.504994 GCGACTGTTTTTGACATTTAGGACA 60.505 40.000 0.00 0.00 37.69 4.02
252 253 4.909880 GCGACTGTTTTTGACATTTAGGAC 59.090 41.667 0.00 0.00 37.69 3.85
253 254 4.023536 GGCGACTGTTTTTGACATTTAGGA 60.024 41.667 0.00 0.00 37.69 2.94
254 255 4.226761 GGCGACTGTTTTTGACATTTAGG 58.773 43.478 0.00 0.00 37.69 2.69
255 256 4.226761 GGGCGACTGTTTTTGACATTTAG 58.773 43.478 0.00 0.00 37.69 1.85
256 257 3.004944 GGGGCGACTGTTTTTGACATTTA 59.995 43.478 0.00 0.00 37.69 1.40
257 258 2.223947 GGGGCGACTGTTTTTGACATTT 60.224 45.455 0.00 0.00 37.69 2.32
258 259 1.339929 GGGGCGACTGTTTTTGACATT 59.660 47.619 0.00 0.00 37.69 2.71
259 260 0.958822 GGGGCGACTGTTTTTGACAT 59.041 50.000 0.00 0.00 37.69 3.06
260 261 1.440938 CGGGGCGACTGTTTTTGACA 61.441 55.000 0.00 0.00 36.65 3.58
261 262 1.161563 TCGGGGCGACTGTTTTTGAC 61.162 55.000 0.00 0.00 0.00 3.18
262 263 0.250553 ATCGGGGCGACTGTTTTTGA 60.251 50.000 0.00 0.00 39.18 2.69
263 264 0.596082 AATCGGGGCGACTGTTTTTG 59.404 50.000 0.00 0.00 39.18 2.44
264 265 1.324383 AAATCGGGGCGACTGTTTTT 58.676 45.000 0.00 0.00 39.18 1.94
265 266 1.808343 GTAAATCGGGGCGACTGTTTT 59.192 47.619 0.00 0.00 39.18 2.43
266 267 1.445871 GTAAATCGGGGCGACTGTTT 58.554 50.000 0.00 0.00 39.18 2.83
267 268 0.392060 GGTAAATCGGGGCGACTGTT 60.392 55.000 0.00 0.00 39.18 3.16
268 269 1.219935 GGTAAATCGGGGCGACTGT 59.780 57.895 0.00 0.00 39.18 3.55
269 270 0.391927 TTGGTAAATCGGGGCGACTG 60.392 55.000 0.00 0.00 39.18 3.51
270 271 0.544697 ATTGGTAAATCGGGGCGACT 59.455 50.000 0.00 0.00 39.18 4.18
271 272 2.243602 TATTGGTAAATCGGGGCGAC 57.756 50.000 0.00 0.00 39.18 5.19
272 273 3.495434 AATATTGGTAAATCGGGGCGA 57.505 42.857 0.00 0.00 41.13 5.54
273 274 3.818773 AGAAATATTGGTAAATCGGGGCG 59.181 43.478 0.00 0.00 0.00 6.13
274 275 5.784578 AAGAAATATTGGTAAATCGGGGC 57.215 39.130 0.00 0.00 0.00 5.80
275 276 6.239204 GGGAAAGAAATATTGGTAAATCGGGG 60.239 42.308 0.00 0.00 0.00 5.73
276 277 6.549736 AGGGAAAGAAATATTGGTAAATCGGG 59.450 38.462 0.00 0.00 0.00 5.14
277 278 7.502561 AGAGGGAAAGAAATATTGGTAAATCGG 59.497 37.037 0.00 0.00 0.00 4.18
278 279 8.451908 AGAGGGAAAGAAATATTGGTAAATCG 57.548 34.615 0.00 0.00 0.00 3.34
281 282 9.031537 GGAAAGAGGGAAAGAAATATTGGTAAA 57.968 33.333 0.00 0.00 0.00 2.01
282 283 7.618117 GGGAAAGAGGGAAAGAAATATTGGTAA 59.382 37.037 0.00 0.00 0.00 2.85
283 284 7.036132 AGGGAAAGAGGGAAAGAAATATTGGTA 60.036 37.037 0.00 0.00 0.00 3.25
284 285 5.958380 GGGAAAGAGGGAAAGAAATATTGGT 59.042 40.000 0.00 0.00 0.00 3.67
285 286 6.197903 AGGGAAAGAGGGAAAGAAATATTGG 58.802 40.000 0.00 0.00 0.00 3.16
286 287 9.072375 GATAGGGAAAGAGGGAAAGAAATATTG 57.928 37.037 0.00 0.00 0.00 1.90
287 288 8.228206 GGATAGGGAAAGAGGGAAAGAAATATT 58.772 37.037 0.00 0.00 0.00 1.28
288 289 7.202326 GGGATAGGGAAAGAGGGAAAGAAATAT 60.202 40.741 0.00 0.00 0.00 1.28
289 290 6.102762 GGGATAGGGAAAGAGGGAAAGAAATA 59.897 42.308 0.00 0.00 0.00 1.40
290 291 5.103473 GGGATAGGGAAAGAGGGAAAGAAAT 60.103 44.000 0.00 0.00 0.00 2.17
291 292 4.229812 GGGATAGGGAAAGAGGGAAAGAAA 59.770 45.833 0.00 0.00 0.00 2.52
292 293 3.786450 GGGATAGGGAAAGAGGGAAAGAA 59.214 47.826 0.00 0.00 0.00 2.52
293 294 3.015275 AGGGATAGGGAAAGAGGGAAAGA 59.985 47.826 0.00 0.00 0.00 2.52
294 295 3.398490 AGGGATAGGGAAAGAGGGAAAG 58.602 50.000 0.00 0.00 0.00 2.62
295 296 3.526360 AGGGATAGGGAAAGAGGGAAA 57.474 47.619 0.00 0.00 0.00 3.13
296 297 4.452363 GGATAGGGATAGGGAAAGAGGGAA 60.452 50.000 0.00 0.00 0.00 3.97
297 298 3.079226 GGATAGGGATAGGGAAAGAGGGA 59.921 52.174 0.00 0.00 0.00 4.20
298 299 3.455849 GGATAGGGATAGGGAAAGAGGG 58.544 54.545 0.00 0.00 0.00 4.30
299 300 3.079843 AGGGATAGGGATAGGGAAAGAGG 59.920 52.174 0.00 0.00 0.00 3.69
300 301 4.427956 AGGGATAGGGATAGGGAAAGAG 57.572 50.000 0.00 0.00 0.00 2.85
301 302 5.042523 GGATAGGGATAGGGATAGGGAAAGA 60.043 48.000 0.00 0.00 0.00 2.52
302 303 5.220521 GGATAGGGATAGGGATAGGGAAAG 58.779 50.000 0.00 0.00 0.00 2.62
303 304 4.014593 GGGATAGGGATAGGGATAGGGAAA 60.015 50.000 0.00 0.00 0.00 3.13
304 305 3.540687 GGGATAGGGATAGGGATAGGGAA 59.459 52.174 0.00 0.00 0.00 3.97
305 306 3.148331 GGGATAGGGATAGGGATAGGGA 58.852 54.545 0.00 0.00 0.00 4.20
306 307 3.151634 AGGGATAGGGATAGGGATAGGG 58.848 54.545 0.00 0.00 0.00 3.53
307 308 7.872008 ATATAGGGATAGGGATAGGGATAGG 57.128 44.000 0.00 0.00 0.00 2.57
336 337 9.638239 GGACTTTGATGCAAAATTACTGAATTA 57.362 29.630 0.00 0.00 34.01 1.40
337 338 7.603784 GGGACTTTGATGCAAAATTACTGAATT 59.396 33.333 0.00 0.00 36.82 2.17
338 339 7.038799 AGGGACTTTGATGCAAAATTACTGAAT 60.039 33.333 0.00 0.00 32.75 2.57
339 340 6.267471 AGGGACTTTGATGCAAAATTACTGAA 59.733 34.615 0.00 0.00 32.75 3.02
593 596 1.003051 GAGGGGGAGCTAAGGTGGA 59.997 63.158 0.00 0.00 0.00 4.02
1761 2507 8.661352 ATGTTTGTCAAGAAAAATCCGAAAAT 57.339 26.923 0.00 0.00 0.00 1.82
1927 2675 2.203788 ACAGCCTCCTTCCCACGA 60.204 61.111 0.00 0.00 0.00 4.35
1928 2676 2.046892 CACAGCCTCCTTCCCACG 60.047 66.667 0.00 0.00 0.00 4.94
2010 2761 3.148412 CTGATGGTCCACACAACATCAA 58.852 45.455 0.00 0.00 46.17 2.57
3273 4139 4.689612 AACATTAGGAGCCATGATACGT 57.310 40.909 0.00 0.00 0.00 3.57
5169 6096 2.522923 TTGCAACCCGGCCAACAT 60.523 55.556 2.24 0.00 0.00 2.71
5227 6168 0.320374 CCGACTTACACTGGCTCCAA 59.680 55.000 0.00 0.00 0.00 3.53
5246 6187 5.183904 ACTGACTTTGATTTCCTGCCATAAC 59.816 40.000 0.00 0.00 0.00 1.89
5368 6309 4.218200 CCTATTCTGTGCAACACCAATCAA 59.782 41.667 0.00 0.00 45.67 2.57
5431 6380 1.404391 TCTTGGAGACGAGGCGTTATC 59.596 52.381 0.00 0.00 41.37 1.75
5432 6381 1.471119 TCTTGGAGACGAGGCGTTAT 58.529 50.000 0.00 0.00 41.37 1.89
5433 6382 1.471119 ATCTTGGAGACGAGGCGTTA 58.529 50.000 0.00 0.00 41.37 3.18
5434 6383 1.471119 TATCTTGGAGACGAGGCGTT 58.529 50.000 0.00 0.00 41.37 4.84
5435 6384 1.693627 ATATCTTGGAGACGAGGCGT 58.306 50.000 0.00 0.00 45.10 5.68
5436 6385 2.398498 CAATATCTTGGAGACGAGGCG 58.602 52.381 0.00 0.00 42.59 5.52
5437 6386 2.139118 GCAATATCTTGGAGACGAGGC 58.861 52.381 0.00 0.00 42.59 4.70
5438 6387 3.459232 TGCAATATCTTGGAGACGAGG 57.541 47.619 0.00 0.00 42.59 4.63
5439 6388 5.295292 ACATTTGCAATATCTTGGAGACGAG 59.705 40.000 0.00 0.00 43.82 4.18
5440 6389 5.065090 CACATTTGCAATATCTTGGAGACGA 59.935 40.000 0.00 0.00 33.95 4.20
5441 6390 5.268544 CACATTTGCAATATCTTGGAGACG 58.731 41.667 0.00 0.00 33.95 4.18
5442 6391 5.126061 ACCACATTTGCAATATCTTGGAGAC 59.874 40.000 15.91 0.00 33.95 3.36
5443 6392 5.263599 ACCACATTTGCAATATCTTGGAGA 58.736 37.500 15.91 0.00 33.95 3.71
5444 6393 5.587388 ACCACATTTGCAATATCTTGGAG 57.413 39.130 15.91 3.49 33.95 3.86
5445 6394 5.479724 TCAACCACATTTGCAATATCTTGGA 59.520 36.000 15.91 1.33 32.72 3.53
5446 6395 5.722263 TCAACCACATTTGCAATATCTTGG 58.278 37.500 0.00 5.79 32.72 3.61
5447 6396 5.808540 CCTCAACCACATTTGCAATATCTTG 59.191 40.000 0.00 0.00 35.36 3.02
5448 6397 5.625197 GCCTCAACCACATTTGCAATATCTT 60.625 40.000 0.00 0.00 0.00 2.40
5449 6398 4.142093 GCCTCAACCACATTTGCAATATCT 60.142 41.667 0.00 0.00 0.00 1.98
5450 6399 4.114794 GCCTCAACCACATTTGCAATATC 58.885 43.478 0.00 0.00 0.00 1.63
5451 6400 3.118665 GGCCTCAACCACATTTGCAATAT 60.119 43.478 0.00 0.00 0.00 1.28
5452 6401 2.233431 GGCCTCAACCACATTTGCAATA 59.767 45.455 0.00 0.00 0.00 1.90
5453 6402 1.002315 GGCCTCAACCACATTTGCAAT 59.998 47.619 0.00 0.00 0.00 3.56
5454 6403 0.392336 GGCCTCAACCACATTTGCAA 59.608 50.000 0.00 0.00 0.00 4.08
5455 6404 1.470996 GGGCCTCAACCACATTTGCA 61.471 55.000 0.84 0.00 0.00 4.08
5456 6405 1.293179 GGGCCTCAACCACATTTGC 59.707 57.895 0.84 0.00 0.00 3.68
5457 6406 1.047002 TTGGGCCTCAACCACATTTG 58.953 50.000 4.53 0.00 37.82 2.32
5458 6407 1.799933 TTTGGGCCTCAACCACATTT 58.200 45.000 4.53 0.00 37.82 2.32
5459 6408 2.028561 ATTTGGGCCTCAACCACATT 57.971 45.000 4.53 0.00 37.82 2.71
5460 6409 2.738743 CTATTTGGGCCTCAACCACAT 58.261 47.619 4.53 0.00 37.82 3.21
5461 6410 1.890573 GCTATTTGGGCCTCAACCACA 60.891 52.381 4.53 0.00 37.82 4.17
5462 6411 0.817654 GCTATTTGGGCCTCAACCAC 59.182 55.000 4.53 0.00 37.82 4.16
5463 6412 0.679640 CGCTATTTGGGCCTCAACCA 60.680 55.000 4.53 0.00 34.67 3.67
5464 6413 0.393808 TCGCTATTTGGGCCTCAACC 60.394 55.000 4.53 0.00 34.67 3.77
5465 6414 0.733150 GTCGCTATTTGGGCCTCAAC 59.267 55.000 4.53 0.00 34.67 3.18
5466 6415 0.393808 GGTCGCTATTTGGGCCTCAA 60.394 55.000 4.53 2.07 0.00 3.02
5467 6416 1.223487 GGTCGCTATTTGGGCCTCA 59.777 57.895 4.53 0.00 0.00 3.86
5468 6417 0.179018 ATGGTCGCTATTTGGGCCTC 60.179 55.000 4.53 0.00 0.00 4.70
5469 6418 0.466189 CATGGTCGCTATTTGGGCCT 60.466 55.000 4.53 0.00 0.00 5.19
5470 6419 1.455383 CCATGGTCGCTATTTGGGCC 61.455 60.000 2.57 0.00 0.00 5.80
5471 6420 0.465460 TCCATGGTCGCTATTTGGGC 60.465 55.000 12.58 0.00 0.00 5.36
5472 6421 1.597742 CTCCATGGTCGCTATTTGGG 58.402 55.000 12.58 0.00 0.00 4.12
5473 6422 1.140852 TCCTCCATGGTCGCTATTTGG 59.859 52.381 12.58 2.03 37.07 3.28
5474 6423 2.487934 CTCCTCCATGGTCGCTATTTG 58.512 52.381 12.58 0.00 37.07 2.32
5475 6424 1.417890 CCTCCTCCATGGTCGCTATTT 59.582 52.381 12.58 0.00 37.07 1.40
5476 6425 1.051812 CCTCCTCCATGGTCGCTATT 58.948 55.000 12.58 0.00 37.07 1.73
5477 6426 0.833834 CCCTCCTCCATGGTCGCTAT 60.834 60.000 12.58 0.00 37.07 2.97
5478 6427 1.457643 CCCTCCTCCATGGTCGCTA 60.458 63.158 12.58 0.00 37.07 4.26
5479 6428 2.765807 CCCTCCTCCATGGTCGCT 60.766 66.667 12.58 0.00 37.07 4.93
5480 6429 4.554036 GCCCTCCTCCATGGTCGC 62.554 72.222 12.58 1.87 37.07 5.19
5481 6430 3.866582 GGCCCTCCTCCATGGTCG 61.867 72.222 12.58 4.18 37.07 4.79
5482 6431 2.367512 AGGCCCTCCTCCATGGTC 60.368 66.667 12.58 0.00 38.72 4.02
5491 6440 3.791586 GCCAGACTGAGGCCCTCC 61.792 72.222 8.62 0.00 46.50 4.30
5508 6457 1.153756 GGGGAGGGGGCATACAATG 59.846 63.158 0.00 0.00 0.00 2.82
5509 6458 2.091283 GGGGGAGGGGGCATACAAT 61.091 63.158 0.00 0.00 0.00 2.71
5510 6459 2.698406 GGGGGAGGGGGCATACAA 60.698 66.667 0.00 0.00 0.00 2.41
5521 6470 3.610669 CTCGATCTGCCGGGGGAG 61.611 72.222 2.18 0.00 34.76 4.30
5525 6474 0.896019 ATCTACCTCGATCTGCCGGG 60.896 60.000 2.18 0.00 0.00 5.73
5526 6475 1.469308 GTATCTACCTCGATCTGCCGG 59.531 57.143 0.00 0.00 0.00 6.13
5527 6476 2.152016 TGTATCTACCTCGATCTGCCG 58.848 52.381 0.00 0.00 0.00 5.69
5528 6477 5.590663 TCATATGTATCTACCTCGATCTGCC 59.409 44.000 1.90 0.00 0.00 4.85
5529 6478 6.094186 TGTCATATGTATCTACCTCGATCTGC 59.906 42.308 1.90 0.00 0.00 4.26
5530 6479 7.617041 TGTCATATGTATCTACCTCGATCTG 57.383 40.000 1.90 0.00 0.00 2.90
5531 6480 7.284261 CCATGTCATATGTATCTACCTCGATCT 59.716 40.741 1.90 0.00 0.00 2.75
5532 6481 7.283354 TCCATGTCATATGTATCTACCTCGATC 59.717 40.741 1.90 0.00 0.00 3.69
5533 6482 7.119387 TCCATGTCATATGTATCTACCTCGAT 58.881 38.462 1.90 0.00 0.00 3.59
5534 6483 6.481643 TCCATGTCATATGTATCTACCTCGA 58.518 40.000 1.90 0.00 0.00 4.04
5535 6484 6.759497 TCCATGTCATATGTATCTACCTCG 57.241 41.667 1.90 0.00 0.00 4.63
5536 6485 7.038659 GCTTCCATGTCATATGTATCTACCTC 58.961 42.308 1.90 0.00 0.00 3.85
5537 6486 6.070538 GGCTTCCATGTCATATGTATCTACCT 60.071 42.308 1.90 0.00 0.00 3.08
5538 6487 6.109359 GGCTTCCATGTCATATGTATCTACC 58.891 44.000 1.90 0.00 0.00 3.18
5539 6488 6.070538 AGGGCTTCCATGTCATATGTATCTAC 60.071 42.308 1.90 0.00 0.00 2.59
5540 6489 6.025539 AGGGCTTCCATGTCATATGTATCTA 58.974 40.000 1.90 0.00 0.00 1.98
5541 6490 4.848660 AGGGCTTCCATGTCATATGTATCT 59.151 41.667 1.90 0.00 0.00 1.98
5542 6491 5.171339 AGGGCTTCCATGTCATATGTATC 57.829 43.478 1.90 0.00 0.00 2.24
5543 6492 4.323028 CGAGGGCTTCCATGTCATATGTAT 60.323 45.833 1.90 0.00 0.00 2.29
5544 6493 3.006859 CGAGGGCTTCCATGTCATATGTA 59.993 47.826 1.90 0.00 0.00 2.29
5545 6494 2.224378 CGAGGGCTTCCATGTCATATGT 60.224 50.000 1.90 0.00 0.00 2.29
5546 6495 2.420642 CGAGGGCTTCCATGTCATATG 58.579 52.381 0.00 0.00 0.00 1.78
5547 6496 1.349026 CCGAGGGCTTCCATGTCATAT 59.651 52.381 0.00 0.00 0.00 1.78
5548 6497 0.758734 CCGAGGGCTTCCATGTCATA 59.241 55.000 0.00 0.00 0.00 2.15
5549 6498 1.528824 CCGAGGGCTTCCATGTCAT 59.471 57.895 0.00 0.00 0.00 3.06
5550 6499 2.669133 CCCGAGGGCTTCCATGTCA 61.669 63.158 0.00 0.00 0.00 3.58
5551 6500 2.190578 CCCGAGGGCTTCCATGTC 59.809 66.667 0.00 0.00 0.00 3.06
5561 6510 0.105039 GACATTCACTAGCCCGAGGG 59.895 60.000 3.22 3.22 38.57 4.30
5562 6511 0.824109 TGACATTCACTAGCCCGAGG 59.176 55.000 0.00 0.00 0.00 4.63
5563 6512 2.166459 TCTTGACATTCACTAGCCCGAG 59.834 50.000 0.00 0.00 0.00 4.63
5564 6513 2.094182 GTCTTGACATTCACTAGCCCGA 60.094 50.000 0.00 0.00 0.00 5.14
5565 6514 2.271800 GTCTTGACATTCACTAGCCCG 58.728 52.381 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.