Multiple sequence alignment - TraesCS5A01G294200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G294200 chr5A 100.000 2528 0 0 1 2528 503435731 503438258 0.000000e+00 4669
1 TraesCS5A01G294200 chr5A 80.345 580 98 10 975 1548 503257905 503258474 2.320000e-115 425
2 TraesCS5A01G294200 chr5A 78.980 647 100 24 975 1611 503396716 503397336 2.340000e-110 409
3 TraesCS5A01G294200 chr5A 92.562 121 9 0 679 799 503472501 503472621 9.300000e-40 174
4 TraesCS5A01G294200 chr5A 84.713 157 15 4 918 1065 503477851 503478007 5.630000e-32 148
5 TraesCS5A01G294200 chr5A 89.474 95 7 3 830 923 503475643 503475735 1.590000e-22 117
6 TraesCS5A01G294200 chr5B 90.155 904 62 9 679 1563 478399091 478399986 0.000000e+00 1151
7 TraesCS5A01G294200 chr5B 80.822 1168 151 33 679 1820 478414464 478415584 0.000000e+00 848
8 TraesCS5A01G294200 chr5B 92.184 499 29 6 1 490 260185959 260185462 0.000000e+00 697
9 TraesCS5A01G294200 chr5B 93.987 449 26 1 1877 2324 478402474 478402922 0.000000e+00 678
10 TraesCS5A01G294200 chr5B 91.383 499 35 7 1 492 256290328 256290825 0.000000e+00 676
11 TraesCS5A01G294200 chr5B 79.469 565 91 18 975 1532 478332001 478332547 6.600000e-101 377
12 TraesCS5A01G294200 chr5B 89.100 211 22 1 2315 2525 478402994 478403203 6.940000e-66 261
13 TraesCS5A01G294200 chr5B 88.942 208 23 0 478 685 478398814 478399021 8.970000e-65 257
14 TraesCS5A01G294200 chr5B 90.506 158 6 4 1586 1735 478399976 478400132 1.530000e-47 200
15 TraesCS5A01G294200 chr5B 88.199 161 9 3 1727 1887 478401855 478402005 1.540000e-42 183
16 TraesCS5A01G294200 chr5B 80.488 205 25 6 493 686 478414194 478414394 2.620000e-30 143
17 TraesCS5A01G294200 chr5D 84.077 1143 129 25 679 1794 398431967 398433083 0.000000e+00 1053
18 TraesCS5A01G294200 chr5D 83.045 1156 152 21 679 1817 398455889 398457017 0.000000e+00 1009
19 TraesCS5A01G294200 chr5D 92.739 482 29 5 1 477 2742940 2742460 0.000000e+00 691
20 TraesCS5A01G294200 chr6B 92.323 495 31 5 1 490 94348112 94347620 0.000000e+00 697
21 TraesCS5A01G294200 chr7B 92.153 497 31 7 1 490 207759487 207759982 0.000000e+00 695
22 TraesCS5A01G294200 chr7B 91.600 500 31 8 1 490 246462029 246461531 0.000000e+00 680
23 TraesCS5A01G294200 chr6D 92.000 500 29 8 1 490 316334524 316335022 0.000000e+00 691
24 TraesCS5A01G294200 chr7D 92.547 483 31 3 1 478 240918722 240918240 0.000000e+00 688
25 TraesCS5A01G294200 chr6A 92.531 482 31 3 1 478 349589681 349589201 0.000000e+00 686


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G294200 chr5A 503435731 503438258 2527 False 4669.0 4669 100.000000 1 2528 1 chr5A.!!$F3 2527
1 TraesCS5A01G294200 chr5A 503257905 503258474 569 False 425.0 425 80.345000 975 1548 1 chr5A.!!$F1 573
2 TraesCS5A01G294200 chr5A 503396716 503397336 620 False 409.0 409 78.980000 975 1611 1 chr5A.!!$F2 636
3 TraesCS5A01G294200 chr5B 478414194 478415584 1390 False 495.5 848 80.655000 493 1820 2 chr5B.!!$F4 1327
4 TraesCS5A01G294200 chr5B 478398814 478403203 4389 False 455.0 1151 90.148167 478 2525 6 chr5B.!!$F3 2047
5 TraesCS5A01G294200 chr5B 478332001 478332547 546 False 377.0 377 79.469000 975 1532 1 chr5B.!!$F2 557
6 TraesCS5A01G294200 chr5D 398431967 398433083 1116 False 1053.0 1053 84.077000 679 1794 1 chr5D.!!$F1 1115
7 TraesCS5A01G294200 chr5D 398455889 398457017 1128 False 1009.0 1009 83.045000 679 1817 1 chr5D.!!$F2 1138

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
93 94 0.039256 CCGGTTGTTGCAACCAGATG 60.039 55.0 26.14 12.15 40.28 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1832 3713 0.271005 AAGTATAGGGGGTGGGGGAG 59.729 60.0 0.0 0.0 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.319137 TCTGATGCTTGCGAGTACTTT 57.681 42.857 2.14 0.00 0.00 2.66
21 22 2.995939 TCTGATGCTTGCGAGTACTTTG 59.004 45.455 2.14 0.00 0.00 2.77
22 23 2.076100 TGATGCTTGCGAGTACTTTGG 58.924 47.619 2.14 0.00 0.00 3.28
23 24 2.289382 TGATGCTTGCGAGTACTTTGGA 60.289 45.455 2.14 0.00 0.00 3.53
24 25 2.472695 TGCTTGCGAGTACTTTGGAT 57.527 45.000 2.14 0.00 0.00 3.41
25 26 2.076100 TGCTTGCGAGTACTTTGGATG 58.924 47.619 2.14 0.00 0.00 3.51
26 27 2.289382 TGCTTGCGAGTACTTTGGATGA 60.289 45.455 2.14 0.00 0.00 2.92
27 28 2.349886 GCTTGCGAGTACTTTGGATGAG 59.650 50.000 2.14 0.00 0.00 2.90
28 29 3.589988 CTTGCGAGTACTTTGGATGAGT 58.410 45.455 0.00 0.00 0.00 3.41
29 30 4.744570 CTTGCGAGTACTTTGGATGAGTA 58.255 43.478 0.00 0.00 0.00 2.59
30 31 4.106029 TGCGAGTACTTTGGATGAGTAC 57.894 45.455 0.00 6.36 46.20 2.73
36 37 3.594603 ACTTTGGATGAGTACTCACGG 57.405 47.619 27.41 15.01 43.11 4.94
37 38 2.897969 ACTTTGGATGAGTACTCACGGT 59.102 45.455 27.41 12.49 43.11 4.83
38 39 3.323979 ACTTTGGATGAGTACTCACGGTT 59.676 43.478 27.41 12.10 43.11 4.44
39 40 3.313012 TTGGATGAGTACTCACGGTTG 57.687 47.619 27.41 0.00 43.11 3.77
40 41 1.067142 TGGATGAGTACTCACGGTTGC 60.067 52.381 27.41 16.91 43.11 4.17
41 42 1.204941 GGATGAGTACTCACGGTTGCT 59.795 52.381 27.41 10.16 43.11 3.91
42 43 2.353803 GGATGAGTACTCACGGTTGCTT 60.354 50.000 27.41 9.38 43.11 3.91
43 44 2.902705 TGAGTACTCACGGTTGCTTT 57.097 45.000 21.74 0.00 34.14 3.51
44 45 2.479837 TGAGTACTCACGGTTGCTTTG 58.520 47.619 21.74 0.00 34.14 2.77
45 46 1.194772 GAGTACTCACGGTTGCTTTGC 59.805 52.381 18.20 0.00 0.00 3.68
46 47 1.202651 AGTACTCACGGTTGCTTTGCT 60.203 47.619 0.00 0.00 0.00 3.91
47 48 1.602377 GTACTCACGGTTGCTTTGCTT 59.398 47.619 0.00 0.00 0.00 3.91
48 49 0.663153 ACTCACGGTTGCTTTGCTTC 59.337 50.000 0.00 0.00 0.00 3.86
49 50 0.040067 CTCACGGTTGCTTTGCTTCC 60.040 55.000 0.00 0.00 0.00 3.46
50 51 1.007387 CACGGTTGCTTTGCTTCCC 60.007 57.895 0.00 0.00 0.00 3.97
51 52 2.200337 ACGGTTGCTTTGCTTCCCC 61.200 57.895 0.00 0.00 0.00 4.81
52 53 1.903404 CGGTTGCTTTGCTTCCCCT 60.903 57.895 0.00 0.00 0.00 4.79
53 54 1.463553 CGGTTGCTTTGCTTCCCCTT 61.464 55.000 0.00 0.00 0.00 3.95
54 55 0.758734 GGTTGCTTTGCTTCCCCTTT 59.241 50.000 0.00 0.00 0.00 3.11
55 56 1.140852 GGTTGCTTTGCTTCCCCTTTT 59.859 47.619 0.00 0.00 0.00 2.27
56 57 2.483876 GTTGCTTTGCTTCCCCTTTTC 58.516 47.619 0.00 0.00 0.00 2.29
57 58 1.047801 TGCTTTGCTTCCCCTTTTCC 58.952 50.000 0.00 0.00 0.00 3.13
58 59 1.342074 GCTTTGCTTCCCCTTTTCCT 58.658 50.000 0.00 0.00 0.00 3.36
59 60 1.273606 GCTTTGCTTCCCCTTTTCCTC 59.726 52.381 0.00 0.00 0.00 3.71
60 61 1.895798 CTTTGCTTCCCCTTTTCCTCC 59.104 52.381 0.00 0.00 0.00 4.30
61 62 1.158007 TTGCTTCCCCTTTTCCTCCT 58.842 50.000 0.00 0.00 0.00 3.69
62 63 1.158007 TGCTTCCCCTTTTCCTCCTT 58.842 50.000 0.00 0.00 0.00 3.36
63 64 1.075536 TGCTTCCCCTTTTCCTCCTTC 59.924 52.381 0.00 0.00 0.00 3.46
64 65 1.356059 GCTTCCCCTTTTCCTCCTTCT 59.644 52.381 0.00 0.00 0.00 2.85
65 66 2.225142 GCTTCCCCTTTTCCTCCTTCTT 60.225 50.000 0.00 0.00 0.00 2.52
66 67 3.755483 GCTTCCCCTTTTCCTCCTTCTTT 60.755 47.826 0.00 0.00 0.00 2.52
67 68 3.808834 TCCCCTTTTCCTCCTTCTTTC 57.191 47.619 0.00 0.00 0.00 2.62
68 69 3.336676 TCCCCTTTTCCTCCTTCTTTCT 58.663 45.455 0.00 0.00 0.00 2.52
69 70 3.727391 TCCCCTTTTCCTCCTTCTTTCTT 59.273 43.478 0.00 0.00 0.00 2.52
70 71 4.082845 CCCCTTTTCCTCCTTCTTTCTTC 58.917 47.826 0.00 0.00 0.00 2.87
71 72 4.202620 CCCCTTTTCCTCCTTCTTTCTTCT 60.203 45.833 0.00 0.00 0.00 2.85
72 73 5.389520 CCCTTTTCCTCCTTCTTTCTTCTT 58.610 41.667 0.00 0.00 0.00 2.52
73 74 5.835819 CCCTTTTCCTCCTTCTTTCTTCTTT 59.164 40.000 0.00 0.00 0.00 2.52
74 75 6.015856 CCCTTTTCCTCCTTCTTTCTTCTTTC 60.016 42.308 0.00 0.00 0.00 2.62
75 76 6.015856 CCTTTTCCTCCTTCTTTCTTCTTTCC 60.016 42.308 0.00 0.00 0.00 3.13
76 77 4.273148 TCCTCCTTCTTTCTTCTTTCCG 57.727 45.455 0.00 0.00 0.00 4.30
77 78 3.008049 TCCTCCTTCTTTCTTCTTTCCGG 59.992 47.826 0.00 0.00 0.00 5.14
78 79 3.244596 CCTCCTTCTTTCTTCTTTCCGGT 60.245 47.826 0.00 0.00 0.00 5.28
79 80 4.390264 CTCCTTCTTTCTTCTTTCCGGTT 58.610 43.478 0.00 0.00 0.00 4.44
80 81 4.134563 TCCTTCTTTCTTCTTTCCGGTTG 58.865 43.478 0.00 0.00 0.00 3.77
81 82 3.883489 CCTTCTTTCTTCTTTCCGGTTGT 59.117 43.478 0.00 0.00 0.00 3.32
82 83 4.338400 CCTTCTTTCTTCTTTCCGGTTGTT 59.662 41.667 0.00 0.00 0.00 2.83
83 84 4.893424 TCTTTCTTCTTTCCGGTTGTTG 57.107 40.909 0.00 0.00 0.00 3.33
84 85 3.066203 TCTTTCTTCTTTCCGGTTGTTGC 59.934 43.478 0.00 0.00 0.00 4.17
85 86 2.045561 TCTTCTTTCCGGTTGTTGCA 57.954 45.000 0.00 0.00 0.00 4.08
86 87 2.370349 TCTTCTTTCCGGTTGTTGCAA 58.630 42.857 0.00 0.00 0.00 4.08
87 88 2.098443 TCTTCTTTCCGGTTGTTGCAAC 59.902 45.455 22.83 22.83 0.00 4.17
88 89 0.741915 TCTTTCCGGTTGTTGCAACC 59.258 50.000 26.14 18.20 36.96 3.77
89 90 0.457851 CTTTCCGGTTGTTGCAACCA 59.542 50.000 26.14 13.54 40.28 3.67
90 91 0.457851 TTTCCGGTTGTTGCAACCAG 59.542 50.000 26.14 16.87 40.28 4.00
91 92 0.394488 TTCCGGTTGTTGCAACCAGA 60.394 50.000 26.14 18.58 40.28 3.86
92 93 0.179004 TCCGGTTGTTGCAACCAGAT 60.179 50.000 26.14 0.00 40.28 2.90
93 94 0.039256 CCGGTTGTTGCAACCAGATG 60.039 55.000 26.14 12.15 40.28 2.90
94 95 0.039256 CGGTTGTTGCAACCAGATGG 60.039 55.000 26.14 7.49 40.28 3.51
106 107 2.935348 CAGATGGTGGATCCCAGGA 58.065 57.895 9.90 0.00 38.07 3.86
107 108 0.763652 CAGATGGTGGATCCCAGGAG 59.236 60.000 9.90 0.00 38.07 3.69
108 109 1.059006 AGATGGTGGATCCCAGGAGC 61.059 60.000 9.90 0.09 38.07 4.70
115 116 1.072852 GATCCCAGGAGCCAGATGC 59.927 63.158 0.00 0.00 41.71 3.91
116 117 2.408880 GATCCCAGGAGCCAGATGCC 62.409 65.000 0.00 0.00 42.71 4.40
117 118 3.414193 CCCAGGAGCCAGATGCCA 61.414 66.667 0.00 0.00 42.71 4.92
118 119 2.124403 CCAGGAGCCAGATGCCAC 60.124 66.667 0.00 0.00 42.71 5.01
119 120 2.124403 CAGGAGCCAGATGCCACC 60.124 66.667 0.00 0.00 42.71 4.61
120 121 3.415087 AGGAGCCAGATGCCACCC 61.415 66.667 0.00 0.00 42.71 4.61
121 122 4.512914 GGAGCCAGATGCCACCCC 62.513 72.222 0.00 0.00 42.71 4.95
122 123 3.731728 GAGCCAGATGCCACCCCA 61.732 66.667 0.00 0.00 42.71 4.96
123 124 3.711059 GAGCCAGATGCCACCCCAG 62.711 68.421 0.00 0.00 42.71 4.45
124 125 4.052518 GCCAGATGCCACCCCAGT 62.053 66.667 0.00 0.00 0.00 4.00
125 126 2.273449 CCAGATGCCACCCCAGTC 59.727 66.667 0.00 0.00 0.00 3.51
126 127 2.124983 CAGATGCCACCCCAGTCG 60.125 66.667 0.00 0.00 0.00 4.18
127 128 2.284625 AGATGCCACCCCAGTCGA 60.285 61.111 0.00 0.00 0.00 4.20
128 129 2.125106 GATGCCACCCCAGTCGAC 60.125 66.667 7.70 7.70 0.00 4.20
129 130 2.607750 ATGCCACCCCAGTCGACT 60.608 61.111 13.58 13.58 0.00 4.18
130 131 1.305802 ATGCCACCCCAGTCGACTA 60.306 57.895 19.57 0.00 0.00 2.59
131 132 1.614241 ATGCCACCCCAGTCGACTAC 61.614 60.000 19.57 2.71 0.00 2.73
132 133 1.982938 GCCACCCCAGTCGACTACT 60.983 63.158 19.57 0.00 39.81 2.57
133 134 0.682209 GCCACCCCAGTCGACTACTA 60.682 60.000 19.57 0.00 35.76 1.82
134 135 1.101331 CCACCCCAGTCGACTACTAC 58.899 60.000 19.57 0.00 35.76 2.73
135 136 1.340795 CCACCCCAGTCGACTACTACT 60.341 57.143 19.57 0.00 35.76 2.57
136 137 2.092753 CCACCCCAGTCGACTACTACTA 60.093 54.545 19.57 0.00 35.76 1.82
137 138 2.941720 CACCCCAGTCGACTACTACTAC 59.058 54.545 19.57 0.00 35.76 2.73
138 139 2.843113 ACCCCAGTCGACTACTACTACT 59.157 50.000 19.57 0.00 35.76 2.57
139 140 4.033709 ACCCCAGTCGACTACTACTACTA 58.966 47.826 19.57 0.00 35.76 1.82
140 141 4.141824 ACCCCAGTCGACTACTACTACTAC 60.142 50.000 19.57 0.00 35.76 2.73
141 142 4.376146 CCCAGTCGACTACTACTACTACC 58.624 52.174 19.57 0.00 35.76 3.18
142 143 4.376146 CCAGTCGACTACTACTACTACCC 58.624 52.174 19.57 0.00 35.76 3.69
143 144 4.141846 CCAGTCGACTACTACTACTACCCA 60.142 50.000 19.57 0.00 35.76 4.51
144 145 5.049167 CAGTCGACTACTACTACTACCCAG 58.951 50.000 19.57 0.00 35.76 4.45
145 146 4.959210 AGTCGACTACTACTACTACCCAGA 59.041 45.833 18.46 0.00 36.36 3.86
146 147 5.068987 AGTCGACTACTACTACTACCCAGAG 59.931 48.000 18.46 0.00 36.36 3.35
147 148 4.343526 TCGACTACTACTACTACCCAGAGG 59.656 50.000 0.00 0.00 40.04 3.69
158 159 2.517609 CCCAGAGGGTGCCTACTAC 58.482 63.158 0.00 0.00 38.25 2.73
159 160 1.392710 CCCAGAGGGTGCCTACTACG 61.393 65.000 0.00 0.00 38.25 3.51
160 161 0.683504 CCAGAGGGTGCCTACTACGT 60.684 60.000 0.00 0.00 31.76 3.57
161 162 0.456221 CAGAGGGTGCCTACTACGTG 59.544 60.000 0.00 0.00 31.76 4.49
162 163 0.683504 AGAGGGTGCCTACTACGTGG 60.684 60.000 0.00 0.00 31.76 4.94
163 164 0.682209 GAGGGTGCCTACTACGTGGA 60.682 60.000 5.70 0.00 31.76 4.02
164 165 0.683504 AGGGTGCCTACTACGTGGAG 60.684 60.000 5.70 0.00 28.47 3.86
165 166 0.682209 GGGTGCCTACTACGTGGAGA 60.682 60.000 5.70 0.00 0.00 3.71
166 167 0.455005 GGTGCCTACTACGTGGAGAC 59.545 60.000 5.70 0.00 0.00 3.36
167 168 0.455005 GTGCCTACTACGTGGAGACC 59.545 60.000 5.70 0.00 0.00 3.85
168 169 1.028330 TGCCTACTACGTGGAGACCG 61.028 60.000 5.70 0.00 0.00 4.79
169 170 1.726265 CCTACTACGTGGAGACCGC 59.274 63.158 5.70 0.00 0.00 5.68
170 171 1.722636 CCTACTACGTGGAGACCGCC 61.723 65.000 5.70 0.00 0.00 6.13
171 172 2.044832 CTACTACGTGGAGACCGCCG 62.045 65.000 5.70 0.00 0.00 6.46
172 173 2.520465 TACTACGTGGAGACCGCCGA 62.520 60.000 5.70 0.00 0.00 5.54
173 174 3.392595 CTACGTGGAGACCGCCGAC 62.393 68.421 0.00 0.00 0.00 4.79
176 177 4.773117 GTGGAGACCGCCGACGAC 62.773 72.222 0.00 0.00 43.93 4.34
179 180 4.477975 GAGACCGCCGACGACCAG 62.478 72.222 0.00 0.00 43.93 4.00
184 185 3.129502 CGCCGACGACCAGGAGTA 61.130 66.667 0.00 0.00 43.93 2.59
185 186 2.799371 GCCGACGACCAGGAGTAG 59.201 66.667 0.00 0.00 0.00 2.57
186 187 2.045131 GCCGACGACCAGGAGTAGT 61.045 63.158 0.00 0.00 36.98 2.73
187 188 1.593296 GCCGACGACCAGGAGTAGTT 61.593 60.000 0.00 0.00 34.05 2.24
188 189 1.742761 CCGACGACCAGGAGTAGTTA 58.257 55.000 0.00 0.00 34.05 2.24
189 190 1.669779 CCGACGACCAGGAGTAGTTAG 59.330 57.143 0.00 0.00 34.05 2.34
190 191 1.669779 CGACGACCAGGAGTAGTTAGG 59.330 57.143 0.00 0.00 34.05 2.69
191 192 2.679059 CGACGACCAGGAGTAGTTAGGA 60.679 54.545 0.00 0.00 34.05 2.94
192 193 2.944349 GACGACCAGGAGTAGTTAGGAG 59.056 54.545 0.00 0.00 34.05 3.69
193 194 2.299521 CGACCAGGAGTAGTTAGGAGG 58.700 57.143 0.00 0.00 0.00 4.30
194 195 2.356947 CGACCAGGAGTAGTTAGGAGGT 60.357 54.545 0.00 0.00 0.00 3.85
195 196 3.289836 GACCAGGAGTAGTTAGGAGGTC 58.710 54.545 0.00 0.00 37.70 3.85
196 197 2.927685 ACCAGGAGTAGTTAGGAGGTCT 59.072 50.000 0.00 0.00 0.00 3.85
197 198 3.053470 ACCAGGAGTAGTTAGGAGGTCTC 60.053 52.174 0.00 0.00 0.00 3.36
198 199 3.053544 CCAGGAGTAGTTAGGAGGTCTCA 60.054 52.174 0.14 0.00 0.00 3.27
199 200 4.204012 CAGGAGTAGTTAGGAGGTCTCAG 58.796 52.174 0.14 0.00 0.00 3.35
200 201 3.203487 AGGAGTAGTTAGGAGGTCTCAGG 59.797 52.174 0.14 0.00 0.00 3.86
201 202 2.953648 GAGTAGTTAGGAGGTCTCAGGC 59.046 54.545 0.14 0.00 0.00 4.85
202 203 2.312140 AGTAGTTAGGAGGTCTCAGGCA 59.688 50.000 0.14 0.00 0.00 4.75
203 204 1.859302 AGTTAGGAGGTCTCAGGCAG 58.141 55.000 0.14 0.00 0.00 4.85
204 205 0.827368 GTTAGGAGGTCTCAGGCAGG 59.173 60.000 0.14 0.00 0.00 4.85
205 206 0.710588 TTAGGAGGTCTCAGGCAGGA 59.289 55.000 0.14 0.00 0.00 3.86
206 207 0.260230 TAGGAGGTCTCAGGCAGGAG 59.740 60.000 0.14 0.22 36.21 3.69
207 208 2.063378 GGAGGTCTCAGGCAGGAGG 61.063 68.421 6.39 0.00 35.58 4.30
208 209 2.686835 AGGTCTCAGGCAGGAGGC 60.687 66.667 6.39 4.54 38.80 4.70
223 224 4.132999 GGCCTTGCCTCTTCGATC 57.867 61.111 0.00 0.00 46.69 3.69
224 225 1.221840 GGCCTTGCCTCTTCGATCA 59.778 57.895 0.00 0.00 46.69 2.92
225 226 0.179034 GGCCTTGCCTCTTCGATCAT 60.179 55.000 0.00 0.00 46.69 2.45
226 227 1.673168 GCCTTGCCTCTTCGATCATT 58.327 50.000 0.00 0.00 0.00 2.57
227 228 1.332997 GCCTTGCCTCTTCGATCATTG 59.667 52.381 0.00 0.00 0.00 2.82
228 229 2.636830 CCTTGCCTCTTCGATCATTGT 58.363 47.619 0.00 0.00 0.00 2.71
229 230 3.012518 CCTTGCCTCTTCGATCATTGTT 58.987 45.455 0.00 0.00 0.00 2.83
230 231 3.181503 CCTTGCCTCTTCGATCATTGTTG 60.182 47.826 0.00 0.00 0.00 3.33
231 232 3.057969 TGCCTCTTCGATCATTGTTGT 57.942 42.857 0.00 0.00 0.00 3.32
232 233 3.411446 TGCCTCTTCGATCATTGTTGTT 58.589 40.909 0.00 0.00 0.00 2.83
233 234 3.820467 TGCCTCTTCGATCATTGTTGTTT 59.180 39.130 0.00 0.00 0.00 2.83
234 235 4.278170 TGCCTCTTCGATCATTGTTGTTTT 59.722 37.500 0.00 0.00 0.00 2.43
235 236 4.618489 GCCTCTTCGATCATTGTTGTTTTG 59.382 41.667 0.00 0.00 0.00 2.44
236 237 5.762045 CCTCTTCGATCATTGTTGTTTTGT 58.238 37.500 0.00 0.00 0.00 2.83
237 238 5.626543 CCTCTTCGATCATTGTTGTTTTGTG 59.373 40.000 0.00 0.00 0.00 3.33
238 239 4.975502 TCTTCGATCATTGTTGTTTTGTGC 59.024 37.500 0.00 0.00 0.00 4.57
239 240 4.566545 TCGATCATTGTTGTTTTGTGCT 57.433 36.364 0.00 0.00 0.00 4.40
240 241 4.930963 TCGATCATTGTTGTTTTGTGCTT 58.069 34.783 0.00 0.00 0.00 3.91
241 242 4.739228 TCGATCATTGTTGTTTTGTGCTTG 59.261 37.500 0.00 0.00 0.00 4.01
242 243 4.606673 CGATCATTGTTGTTTTGTGCTTGC 60.607 41.667 0.00 0.00 0.00 4.01
243 244 2.935201 TCATTGTTGTTTTGTGCTTGCC 59.065 40.909 0.00 0.00 0.00 4.52
244 245 2.758736 TTGTTGTTTTGTGCTTGCCT 57.241 40.000 0.00 0.00 0.00 4.75
245 246 2.758736 TGTTGTTTTGTGCTTGCCTT 57.241 40.000 0.00 0.00 0.00 4.35
246 247 2.615869 TGTTGTTTTGTGCTTGCCTTC 58.384 42.857 0.00 0.00 0.00 3.46
247 248 2.233431 TGTTGTTTTGTGCTTGCCTTCT 59.767 40.909 0.00 0.00 0.00 2.85
248 249 3.261580 GTTGTTTTGTGCTTGCCTTCTT 58.738 40.909 0.00 0.00 0.00 2.52
249 250 4.081972 TGTTGTTTTGTGCTTGCCTTCTTA 60.082 37.500 0.00 0.00 0.00 2.10
250 251 4.727507 TGTTTTGTGCTTGCCTTCTTAA 57.272 36.364 0.00 0.00 0.00 1.85
251 252 4.681744 TGTTTTGTGCTTGCCTTCTTAAG 58.318 39.130 0.00 0.00 0.00 1.85
265 266 6.877611 CCTTCTTAAGGCAGTCTTGTTTAA 57.122 37.500 1.85 0.00 42.78 1.52
266 267 6.669278 CCTTCTTAAGGCAGTCTTGTTTAAC 58.331 40.000 1.85 0.00 42.78 2.01
267 268 6.486993 CCTTCTTAAGGCAGTCTTGTTTAACT 59.513 38.462 1.85 0.00 42.78 2.24
268 269 7.013369 CCTTCTTAAGGCAGTCTTGTTTAACTT 59.987 37.037 1.85 0.00 42.78 2.66
269 270 8.967664 TTCTTAAGGCAGTCTTGTTTAACTTA 57.032 30.769 1.85 0.00 36.93 2.24
270 271 9.569122 TTCTTAAGGCAGTCTTGTTTAACTTAT 57.431 29.630 1.85 0.00 36.93 1.73
271 272 8.999431 TCTTAAGGCAGTCTTGTTTAACTTATG 58.001 33.333 1.85 0.00 36.93 1.90
272 273 8.685838 TTAAGGCAGTCTTGTTTAACTTATGT 57.314 30.769 0.00 0.00 36.93 2.29
273 274 6.803154 AGGCAGTCTTGTTTAACTTATGTC 57.197 37.500 0.00 0.00 0.00 3.06
274 275 6.534634 AGGCAGTCTTGTTTAACTTATGTCT 58.465 36.000 0.00 0.00 0.00 3.41
275 276 6.428159 AGGCAGTCTTGTTTAACTTATGTCTG 59.572 38.462 0.00 0.18 0.00 3.51
276 277 6.204882 GGCAGTCTTGTTTAACTTATGTCTGT 59.795 38.462 0.00 0.00 0.00 3.41
277 278 7.386848 GGCAGTCTTGTTTAACTTATGTCTGTA 59.613 37.037 0.00 0.00 0.00 2.74
278 279 8.221766 GCAGTCTTGTTTAACTTATGTCTGTAC 58.778 37.037 0.00 0.00 0.00 2.90
279 280 8.709646 CAGTCTTGTTTAACTTATGTCTGTACC 58.290 37.037 0.00 0.00 0.00 3.34
280 281 7.876582 AGTCTTGTTTAACTTATGTCTGTACCC 59.123 37.037 0.00 0.00 0.00 3.69
281 282 7.658575 GTCTTGTTTAACTTATGTCTGTACCCA 59.341 37.037 0.00 0.00 0.00 4.51
282 283 7.876068 TCTTGTTTAACTTATGTCTGTACCCAG 59.124 37.037 0.00 0.00 40.25 4.45
283 284 7.305813 TGTTTAACTTATGTCTGTACCCAGA 57.694 36.000 0.00 0.00 45.44 3.86
294 295 5.435686 TCTGTACCCAGATATTGTTGCTT 57.564 39.130 0.00 0.00 42.80 3.91
295 296 5.428253 TCTGTACCCAGATATTGTTGCTTC 58.572 41.667 0.00 0.00 42.80 3.86
296 297 4.523083 TGTACCCAGATATTGTTGCTTCC 58.477 43.478 0.00 0.00 0.00 3.46
297 298 2.643551 ACCCAGATATTGTTGCTTCCG 58.356 47.619 0.00 0.00 0.00 4.30
298 299 1.334869 CCCAGATATTGTTGCTTCCGC 59.665 52.381 0.00 0.00 0.00 5.54
299 300 2.292267 CCAGATATTGTTGCTTCCGCT 58.708 47.619 0.00 0.00 36.97 5.52
300 301 2.032550 CCAGATATTGTTGCTTCCGCTG 59.967 50.000 0.00 0.00 36.97 5.18
301 302 2.938451 CAGATATTGTTGCTTCCGCTGA 59.062 45.455 0.00 0.00 36.97 4.26
302 303 2.939103 AGATATTGTTGCTTCCGCTGAC 59.061 45.455 0.00 0.00 36.97 3.51
303 304 2.472695 TATTGTTGCTTCCGCTGACT 57.527 45.000 0.00 0.00 36.97 3.41
304 305 1.160137 ATTGTTGCTTCCGCTGACTC 58.840 50.000 0.00 0.00 36.97 3.36
305 306 0.106708 TTGTTGCTTCCGCTGACTCT 59.893 50.000 0.00 0.00 36.97 3.24
306 307 0.106708 TGTTGCTTCCGCTGACTCTT 59.893 50.000 0.00 0.00 36.97 2.85
307 308 0.514691 GTTGCTTCCGCTGACTCTTG 59.485 55.000 0.00 0.00 36.97 3.02
308 309 0.106708 TTGCTTCCGCTGACTCTTGT 59.893 50.000 0.00 0.00 36.97 3.16
309 310 0.601046 TGCTTCCGCTGACTCTTGTG 60.601 55.000 0.00 0.00 36.97 3.33
310 311 0.601311 GCTTCCGCTGACTCTTGTGT 60.601 55.000 0.00 0.00 0.00 3.72
311 312 1.336887 GCTTCCGCTGACTCTTGTGTA 60.337 52.381 0.00 0.00 0.00 2.90
312 313 2.675317 GCTTCCGCTGACTCTTGTGTAT 60.675 50.000 0.00 0.00 0.00 2.29
313 314 2.941453 TCCGCTGACTCTTGTGTATC 57.059 50.000 0.00 0.00 0.00 2.24
314 315 1.132453 TCCGCTGACTCTTGTGTATCG 59.868 52.381 0.00 0.00 0.00 2.92
315 316 1.132453 CCGCTGACTCTTGTGTATCGA 59.868 52.381 0.00 0.00 0.00 3.59
316 317 2.445316 CGCTGACTCTTGTGTATCGAG 58.555 52.381 0.00 0.00 0.00 4.04
317 318 2.189342 GCTGACTCTTGTGTATCGAGC 58.811 52.381 0.00 0.00 0.00 5.03
318 319 2.159310 GCTGACTCTTGTGTATCGAGCT 60.159 50.000 0.00 0.00 0.00 4.09
319 320 3.065510 GCTGACTCTTGTGTATCGAGCTA 59.934 47.826 0.00 0.00 0.00 3.32
320 321 4.261405 GCTGACTCTTGTGTATCGAGCTAT 60.261 45.833 0.00 0.00 0.00 2.97
321 322 5.175090 TGACTCTTGTGTATCGAGCTATG 57.825 43.478 0.00 0.00 0.00 2.23
322 323 4.640647 TGACTCTTGTGTATCGAGCTATGT 59.359 41.667 0.00 0.00 0.00 2.29
323 324 5.820947 TGACTCTTGTGTATCGAGCTATGTA 59.179 40.000 0.00 0.00 0.00 2.29
324 325 6.486993 TGACTCTTGTGTATCGAGCTATGTAT 59.513 38.462 0.00 0.00 0.00 2.29
325 326 7.013369 TGACTCTTGTGTATCGAGCTATGTATT 59.987 37.037 0.00 0.00 0.00 1.89
326 327 7.364200 ACTCTTGTGTATCGAGCTATGTATTC 58.636 38.462 0.00 0.00 0.00 1.75
327 328 6.371389 TCTTGTGTATCGAGCTATGTATTCG 58.629 40.000 0.00 0.00 35.76 3.34
328 329 5.934935 TGTGTATCGAGCTATGTATTCGA 57.065 39.130 0.00 0.00 45.96 3.71
329 330 5.928153 TGTGTATCGAGCTATGTATTCGAG 58.072 41.667 0.00 0.00 45.23 4.04
330 331 4.789119 GTGTATCGAGCTATGTATTCGAGC 59.211 45.833 0.00 0.00 45.23 5.03
331 332 2.991434 TCGAGCTATGTATTCGAGCC 57.009 50.000 0.00 0.00 38.32 4.70
332 333 1.540267 TCGAGCTATGTATTCGAGCCC 59.460 52.381 0.00 0.00 38.32 5.19
333 334 1.542030 CGAGCTATGTATTCGAGCCCT 59.458 52.381 0.00 0.00 36.87 5.19
334 335 2.414824 CGAGCTATGTATTCGAGCCCTC 60.415 54.545 0.00 0.00 36.87 4.30
360 361 4.470602 GCCCCTGGCTTGTAATATAAAGT 58.529 43.478 0.00 0.00 46.69 2.66
361 362 4.893524 GCCCCTGGCTTGTAATATAAAGTT 59.106 41.667 0.00 0.00 46.69 2.66
362 363 5.362717 GCCCCTGGCTTGTAATATAAAGTTT 59.637 40.000 0.00 0.00 46.69 2.66
363 364 6.461092 GCCCCTGGCTTGTAATATAAAGTTTC 60.461 42.308 0.00 0.00 46.69 2.78
364 365 6.833933 CCCCTGGCTTGTAATATAAAGTTTCT 59.166 38.462 0.00 0.00 0.00 2.52
365 366 7.996644 CCCCTGGCTTGTAATATAAAGTTTCTA 59.003 37.037 0.00 0.00 0.00 2.10
366 367 9.574516 CCCTGGCTTGTAATATAAAGTTTCTAT 57.425 33.333 0.00 0.00 0.00 1.98
394 395 9.950680 ATTTTATTTGTGTCTAGAGTTGTGTTG 57.049 29.630 0.00 0.00 0.00 3.33
395 396 8.500753 TTTATTTGTGTCTAGAGTTGTGTTGT 57.499 30.769 0.00 0.00 0.00 3.32
396 397 5.794687 TTTGTGTCTAGAGTTGTGTTGTG 57.205 39.130 0.00 0.00 0.00 3.33
397 398 4.729227 TGTGTCTAGAGTTGTGTTGTGA 57.271 40.909 0.00 0.00 0.00 3.58
398 399 5.276461 TGTGTCTAGAGTTGTGTTGTGAT 57.724 39.130 0.00 0.00 0.00 3.06
399 400 5.670485 TGTGTCTAGAGTTGTGTTGTGATT 58.330 37.500 0.00 0.00 0.00 2.57
400 401 6.112734 TGTGTCTAGAGTTGTGTTGTGATTT 58.887 36.000 0.00 0.00 0.00 2.17
401 402 6.257849 TGTGTCTAGAGTTGTGTTGTGATTTC 59.742 38.462 0.00 0.00 0.00 2.17
402 403 6.480320 GTGTCTAGAGTTGTGTTGTGATTTCT 59.520 38.462 0.00 0.00 0.00 2.52
403 404 7.011482 GTGTCTAGAGTTGTGTTGTGATTTCTT 59.989 37.037 0.00 0.00 0.00 2.52
404 405 7.224753 TGTCTAGAGTTGTGTTGTGATTTCTTC 59.775 37.037 0.00 0.00 0.00 2.87
405 406 5.757850 AGAGTTGTGTTGTGATTTCTTCC 57.242 39.130 0.00 0.00 0.00 3.46
406 407 4.580580 AGAGTTGTGTTGTGATTTCTTCCC 59.419 41.667 0.00 0.00 0.00 3.97
407 408 3.315191 AGTTGTGTTGTGATTTCTTCCCG 59.685 43.478 0.00 0.00 0.00 5.14
408 409 2.925724 TGTGTTGTGATTTCTTCCCGT 58.074 42.857 0.00 0.00 0.00 5.28
409 410 2.616376 TGTGTTGTGATTTCTTCCCGTG 59.384 45.455 0.00 0.00 0.00 4.94
410 411 2.875933 GTGTTGTGATTTCTTCCCGTGA 59.124 45.455 0.00 0.00 0.00 4.35
411 412 3.058914 GTGTTGTGATTTCTTCCCGTGAG 60.059 47.826 0.00 0.00 0.00 3.51
412 413 3.139077 GTTGTGATTTCTTCCCGTGAGT 58.861 45.455 0.00 0.00 0.00 3.41
413 414 3.040147 TGTGATTTCTTCCCGTGAGTC 57.960 47.619 0.00 0.00 0.00 3.36
414 415 2.632996 TGTGATTTCTTCCCGTGAGTCT 59.367 45.455 0.00 0.00 0.00 3.24
415 416 3.071023 TGTGATTTCTTCCCGTGAGTCTT 59.929 43.478 0.00 0.00 0.00 3.01
416 417 4.065789 GTGATTTCTTCCCGTGAGTCTTT 58.934 43.478 0.00 0.00 0.00 2.52
417 418 5.221561 TGTGATTTCTTCCCGTGAGTCTTTA 60.222 40.000 0.00 0.00 0.00 1.85
418 419 5.699458 GTGATTTCTTCCCGTGAGTCTTTAA 59.301 40.000 0.00 0.00 0.00 1.52
419 420 6.371825 GTGATTTCTTCCCGTGAGTCTTTAAT 59.628 38.462 0.00 0.00 0.00 1.40
420 421 6.594159 TGATTTCTTCCCGTGAGTCTTTAATC 59.406 38.462 0.00 0.00 0.00 1.75
421 422 5.740290 TTCTTCCCGTGAGTCTTTAATCT 57.260 39.130 0.00 0.00 0.00 2.40
422 423 5.740290 TCTTCCCGTGAGTCTTTAATCTT 57.260 39.130 0.00 0.00 0.00 2.40
423 424 6.845758 TCTTCCCGTGAGTCTTTAATCTTA 57.154 37.500 0.00 0.00 0.00 2.10
424 425 7.235935 TCTTCCCGTGAGTCTTTAATCTTAA 57.764 36.000 0.00 0.00 0.00 1.85
425 426 7.848128 TCTTCCCGTGAGTCTTTAATCTTAAT 58.152 34.615 0.00 0.00 0.00 1.40
426 427 8.319146 TCTTCCCGTGAGTCTTTAATCTTAATT 58.681 33.333 0.00 0.00 0.00 1.40
427 428 7.843490 TCCCGTGAGTCTTTAATCTTAATTG 57.157 36.000 0.00 0.00 0.00 2.32
428 429 7.391620 TCCCGTGAGTCTTTAATCTTAATTGT 58.608 34.615 0.00 0.00 0.00 2.71
429 430 8.533657 TCCCGTGAGTCTTTAATCTTAATTGTA 58.466 33.333 0.00 0.00 0.00 2.41
430 431 8.601476 CCCGTGAGTCTTTAATCTTAATTGTAC 58.399 37.037 0.00 0.00 0.00 2.90
431 432 9.146984 CCGTGAGTCTTTAATCTTAATTGTACA 57.853 33.333 0.00 0.00 0.00 2.90
432 433 9.953825 CGTGAGTCTTTAATCTTAATTGTACAC 57.046 33.333 0.00 0.00 0.00 2.90
440 441 9.900710 TTTAATCTTAATTGTACACATTTGCGT 57.099 25.926 0.00 0.00 0.00 5.24
441 442 7.795431 AATCTTAATTGTACACATTTGCGTG 57.205 32.000 0.00 0.00 42.81 5.34
453 454 5.868257 CACATTTGCGTGTATGATTAGTGT 58.132 37.500 0.00 0.00 32.00 3.55
454 455 6.999456 CACATTTGCGTGTATGATTAGTGTA 58.001 36.000 0.00 0.00 32.00 2.90
455 456 6.899771 CACATTTGCGTGTATGATTAGTGTAC 59.100 38.462 0.00 0.00 32.00 2.90
456 457 5.689927 TTTGCGTGTATGATTAGTGTACG 57.310 39.130 0.00 0.00 0.00 3.67
457 458 4.619437 TGCGTGTATGATTAGTGTACGA 57.381 40.909 0.00 0.00 32.36 3.43
458 459 5.177725 TGCGTGTATGATTAGTGTACGAT 57.822 39.130 0.00 0.00 32.36 3.73
459 460 5.584442 TGCGTGTATGATTAGTGTACGATT 58.416 37.500 0.00 0.00 32.36 3.34
460 461 5.457473 TGCGTGTATGATTAGTGTACGATTG 59.543 40.000 0.00 0.00 32.36 2.67
461 462 5.684184 GCGTGTATGATTAGTGTACGATTGA 59.316 40.000 0.00 0.00 32.36 2.57
462 463 6.197655 GCGTGTATGATTAGTGTACGATTGAA 59.802 38.462 0.00 0.00 32.36 2.69
463 464 7.096189 GCGTGTATGATTAGTGTACGATTGAAT 60.096 37.037 0.00 0.00 32.36 2.57
464 465 8.417928 CGTGTATGATTAGTGTACGATTGAATC 58.582 37.037 0.00 0.00 32.36 2.52
476 477 2.564771 GATTGAATCGGAGGCATCACA 58.435 47.619 0.00 0.00 0.00 3.58
477 478 2.488204 TTGAATCGGAGGCATCACAA 57.512 45.000 0.00 0.00 0.00 3.33
478 479 2.715749 TGAATCGGAGGCATCACAAT 57.284 45.000 0.00 0.00 0.00 2.71
479 480 2.291365 TGAATCGGAGGCATCACAATG 58.709 47.619 0.00 0.00 35.87 2.82
480 481 1.605710 GAATCGGAGGCATCACAATGG 59.394 52.381 0.00 0.00 33.19 3.16
499 500 1.626686 GCTATAGAGCTGCAGGGAGA 58.373 55.000 17.12 0.00 45.98 3.71
502 503 3.766591 GCTATAGAGCTGCAGGGAGAATA 59.233 47.826 17.12 0.00 45.98 1.75
515 516 4.163078 CAGGGAGAATAGAGAAGCAAAGGA 59.837 45.833 0.00 0.00 0.00 3.36
523 528 1.609072 GAGAAGCAAAGGAAAAGCGGT 59.391 47.619 0.00 0.00 0.00 5.68
533 538 1.336755 GGAAAAGCGGTGAGAAAGCAA 59.663 47.619 0.00 0.00 0.00 3.91
582 587 3.071459 GATCGTCACGCTGCAACGG 62.071 63.158 14.82 3.14 37.05 4.44
585 590 3.414700 GTCACGCTGCAACGGAGG 61.415 66.667 14.82 3.21 37.37 4.30
670 682 4.282195 CCACTCTAGTCCTTTATGGCCTAG 59.718 50.000 3.32 0.00 43.73 3.02
680 770 5.670361 TCCTTTATGGCCTAGTTGGAATACT 59.330 40.000 3.32 0.00 37.63 2.12
693 783 5.705905 AGTTGGAATACTTTCTTGTAGTGCC 59.294 40.000 0.00 0.00 29.96 5.01
698 788 6.757478 GGAATACTTTCTTGTAGTGCCTACTC 59.243 42.308 11.92 0.69 34.02 2.59
722 812 5.233476 CCACATGCATATGCTCAAATTGTTC 59.767 40.000 27.13 0.00 42.66 3.18
773 870 6.040054 ACGCTTTGGACAACCTAATAAAGTTT 59.960 34.615 0.00 0.00 37.04 2.66
774 871 6.362283 CGCTTTGGACAACCTAATAAAGTTTG 59.638 38.462 0.00 0.00 37.04 2.93
775 872 7.430441 GCTTTGGACAACCTAATAAAGTTTGA 58.570 34.615 0.00 0.00 37.04 2.69
776 873 8.088365 GCTTTGGACAACCTAATAAAGTTTGAT 58.912 33.333 0.00 0.00 37.04 2.57
777 874 9.626045 CTTTGGACAACCTAATAAAGTTTGATC 57.374 33.333 0.00 0.00 37.04 2.92
778 875 8.698973 TTGGACAACCTAATAAAGTTTGATCA 57.301 30.769 0.00 0.00 37.04 2.92
779 876 8.877864 TGGACAACCTAATAAAGTTTGATCAT 57.122 30.769 0.00 0.00 37.04 2.45
820 917 2.341257 CACTCTTAGTTGCATGCTCGT 58.659 47.619 20.33 5.36 0.00 4.18
891 1005 2.744202 CACCCTCTCAATTCTCAAACCG 59.256 50.000 0.00 0.00 0.00 4.44
892 1006 2.290323 ACCCTCTCAATTCTCAAACCGG 60.290 50.000 0.00 0.00 0.00 5.28
970 1087 5.124936 ACGATTCCTTAATTAGTTGTTGCCC 59.875 40.000 0.00 0.00 0.00 5.36
974 1091 4.770010 TCCTTAATTAGTTGTTGCCCTTGG 59.230 41.667 0.00 0.00 0.00 3.61
1010 1136 5.410746 TCTCAGCAACAAAGATGAAGATCAC 59.589 40.000 0.00 0.00 32.97 3.06
1014 1140 4.919754 GCAACAAAGATGAAGATCACCAAC 59.080 41.667 0.00 0.00 0.00 3.77
1069 1195 1.517242 CAAGAGCAAGACCAGTGTCC 58.483 55.000 0.00 0.00 42.81 4.02
1098 1224 2.866726 GCTCCTCATCCTCGCCTCC 61.867 68.421 0.00 0.00 0.00 4.30
1111 1238 3.461773 CCTCCGTCCATCGCAGGT 61.462 66.667 0.00 0.00 42.11 4.00
1227 1354 4.063529 CGCAAGGTTGAGAAGCCA 57.936 55.556 0.00 0.00 0.00 4.75
1270 1397 2.168458 TGATCCGTCCCACCATCTAA 57.832 50.000 0.00 0.00 0.00 2.10
1395 1528 6.410540 CAGTGATGATGATGATGGAGATGAT 58.589 40.000 0.00 0.00 0.00 2.45
1409 1542 3.006752 GGAGATGATCCCTCAGTGATGAC 59.993 52.174 12.47 0.00 43.01 3.06
1510 1646 0.036010 AAGGTTCCGTGAGCAGATGG 60.036 55.000 0.00 0.00 0.00 3.51
1517 1653 0.171231 CGTGAGCAGATGGACGAGAA 59.829 55.000 0.00 0.00 33.64 2.87
1553 1689 7.003482 TGTTGTGTTCCATATATACCATGCAT 58.997 34.615 0.00 0.00 0.00 3.96
1594 1734 3.000727 GCTAACAAAGTGACGGTAGCAT 58.999 45.455 1.71 0.00 0.00 3.79
1709 1853 8.414778 AGAAGTTTTTGATAGATACCTACCTCG 58.585 37.037 0.00 0.00 0.00 4.63
1828 3709 3.724732 AACTCTAACGGTCCTCTCTCT 57.275 47.619 0.00 0.00 0.00 3.10
1832 3713 0.258194 TAACGGTCCTCTCTCTCCCC 59.742 60.000 0.00 0.00 0.00 4.81
1833 3714 1.511316 AACGGTCCTCTCTCTCCCCT 61.511 60.000 0.00 0.00 0.00 4.79
1838 3719 2.612251 CTCTCTCTCCCCTCCCCC 59.388 72.222 0.00 0.00 0.00 5.40
1839 3720 2.204624 TCTCTCTCCCCTCCCCCA 60.205 66.667 0.00 0.00 0.00 4.96
1840 3721 2.041405 CTCTCTCCCCTCCCCCAC 60.041 72.222 0.00 0.00 0.00 4.61
1876 3757 4.038080 CCGGCTTCCACCAAACGC 62.038 66.667 0.00 0.00 0.00 4.84
1896 4256 1.408822 CCATCTTCTTGCCCACTACCC 60.409 57.143 0.00 0.00 0.00 3.69
1920 4280 3.374367 GCCCTTCCAAAGTTCTCGTTATC 59.626 47.826 0.00 0.00 0.00 1.75
1935 4295 3.376234 TCGTTATCGACAAGGACACCTAG 59.624 47.826 0.00 0.00 41.35 3.02
1985 4345 2.094078 CCACCACATTGCAGGTATTTGG 60.094 50.000 1.29 1.29 36.07 3.28
1992 4352 4.399303 ACATTGCAGGTATTTGGTAAGCTC 59.601 41.667 0.00 0.00 0.00 4.09
2097 4457 8.435982 AGAGCAAATTAGTAGAAGGCTTCATAT 58.564 33.333 27.70 15.10 0.00 1.78
2130 4490 8.877864 AGATATAGAATGAACACCCACAAAAA 57.122 30.769 0.00 0.00 0.00 1.94
2137 4497 4.815269 TGAACACCCACAAAAAGAGTTTG 58.185 39.130 0.00 0.00 35.64 2.93
2217 4578 0.322187 ACAAACTCCGTACCCATGGC 60.322 55.000 6.09 0.00 0.00 4.40
2240 4601 0.456142 GGCGAAATCCGAACAAAGCC 60.456 55.000 0.00 0.00 41.76 4.35
2268 4629 9.995003 AAAGTGTGGCTTTATTTTGATGAAATA 57.005 25.926 0.00 0.00 44.90 1.40
2297 4658 8.410141 AGATTCTTTTCGTAAACATTGTGGAAA 58.590 29.630 0.00 0.00 0.00 3.13
2301 4662 7.646130 TCTTTTCGTAAACATTGTGGAAATCAC 59.354 33.333 0.00 0.00 46.23 3.06
2330 4772 0.673437 GCCATCTCTTCTCTCTCCCG 59.327 60.000 0.00 0.00 0.00 5.14
2383 4825 4.603131 AGATTCACCCTTGCAATACATGT 58.397 39.130 2.69 2.69 0.00 3.21
2393 4835 3.609853 TGCAATACATGTGTTCTCTCCC 58.390 45.455 9.11 0.00 0.00 4.30
2442 4884 2.458892 TTTTTCTCGAGGGGGAGCA 58.541 52.632 13.56 0.00 33.98 4.26
2443 4885 0.768622 TTTTTCTCGAGGGGGAGCAA 59.231 50.000 13.56 0.00 33.98 3.91
2449 4891 0.325671 TCGAGGGGGAGCAAGATTCT 60.326 55.000 0.00 0.00 0.00 2.40
2450 4892 0.105778 CGAGGGGGAGCAAGATTCTC 59.894 60.000 0.00 0.00 0.00 2.87
2451 4893 0.105778 GAGGGGGAGCAAGATTCTCG 59.894 60.000 0.00 0.00 0.00 4.04
2453 4895 0.761802 GGGGGAGCAAGATTCTCGAT 59.238 55.000 0.00 0.00 0.00 3.59
2457 4899 3.181465 GGGGAGCAAGATTCTCGATTACA 60.181 47.826 0.00 0.00 0.00 2.41
2465 4907 8.467598 AGCAAGATTCTCGATTACAGTAGTAAA 58.532 33.333 0.00 0.00 43.01 2.01
2467 4909 9.569167 CAAGATTCTCGATTACAGTAGTAAACA 57.431 33.333 0.00 0.00 43.01 2.83
2473 4915 9.701098 TCTCGATTACAGTAGTAAACACAAAAT 57.299 29.630 0.00 0.00 43.01 1.82
2479 4921 7.272037 ACAGTAGTAAACACAAAATTCCAGG 57.728 36.000 0.00 0.00 0.00 4.45
2504 4946 8.846211 GGTATATCCCGATCAAAAGATTTCAAA 58.154 33.333 0.00 0.00 0.00 2.69
2519 4961 7.205737 AGATTTCAAACAAAATTTGGATGCC 57.794 32.000 10.71 0.00 34.12 4.40
2525 4967 7.256286 TCAAACAAAATTTGGATGCCTTTTTG 58.744 30.769 10.71 8.74 41.01 2.44
2526 4968 6.772360 AACAAAATTTGGATGCCTTTTTGT 57.228 29.167 10.71 12.83 46.65 2.83
2527 4969 7.872113 AACAAAATTTGGATGCCTTTTTGTA 57.128 28.000 16.55 0.00 44.99 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.995939 CAAAGTACTCGCAAGCATCAGA 59.004 45.455 0.00 0.00 37.18 3.27
7 8 3.589988 ACTCATCCAAAGTACTCGCAAG 58.410 45.455 0.00 0.00 0.00 4.01
8 9 3.678056 ACTCATCCAAAGTACTCGCAA 57.322 42.857 0.00 0.00 0.00 4.85
9 10 4.106029 GTACTCATCCAAAGTACTCGCA 57.894 45.455 0.00 0.00 43.68 5.10
14 15 4.082354 ACCGTGAGTACTCATCCAAAGTAC 60.082 45.833 27.54 10.98 46.15 2.73
15 16 4.084287 ACCGTGAGTACTCATCCAAAGTA 58.916 43.478 27.54 0.00 42.18 2.24
16 17 2.897969 ACCGTGAGTACTCATCCAAAGT 59.102 45.455 27.54 15.35 42.18 2.66
17 18 3.594603 ACCGTGAGTACTCATCCAAAG 57.405 47.619 27.54 14.79 42.18 2.77
18 19 3.659786 CAACCGTGAGTACTCATCCAAA 58.340 45.455 27.54 1.25 42.18 3.28
19 20 2.611971 GCAACCGTGAGTACTCATCCAA 60.612 50.000 27.54 2.04 42.18 3.53
20 21 1.067142 GCAACCGTGAGTACTCATCCA 60.067 52.381 27.54 3.18 42.18 3.41
21 22 1.204941 AGCAACCGTGAGTACTCATCC 59.795 52.381 27.54 15.15 42.18 3.51
22 23 2.656560 AGCAACCGTGAGTACTCATC 57.343 50.000 27.54 18.97 42.18 2.92
23 24 3.067106 CAAAGCAACCGTGAGTACTCAT 58.933 45.455 27.54 10.21 42.18 2.90
24 25 2.479837 CAAAGCAACCGTGAGTACTCA 58.520 47.619 21.74 21.74 37.24 3.41
25 26 1.194772 GCAAAGCAACCGTGAGTACTC 59.805 52.381 16.32 16.32 0.00 2.59
26 27 1.202651 AGCAAAGCAACCGTGAGTACT 60.203 47.619 0.00 0.00 0.00 2.73
27 28 1.226746 AGCAAAGCAACCGTGAGTAC 58.773 50.000 0.00 0.00 0.00 2.73
28 29 1.871039 GAAGCAAAGCAACCGTGAGTA 59.129 47.619 0.00 0.00 0.00 2.59
29 30 0.663153 GAAGCAAAGCAACCGTGAGT 59.337 50.000 0.00 0.00 0.00 3.41
30 31 0.040067 GGAAGCAAAGCAACCGTGAG 60.040 55.000 0.00 0.00 0.00 3.51
31 32 1.452145 GGGAAGCAAAGCAACCGTGA 61.452 55.000 0.00 0.00 0.00 4.35
32 33 1.007387 GGGAAGCAAAGCAACCGTG 60.007 57.895 0.00 0.00 0.00 4.94
33 34 2.200337 GGGGAAGCAAAGCAACCGT 61.200 57.895 0.00 0.00 0.00 4.83
34 35 1.463553 AAGGGGAAGCAAAGCAACCG 61.464 55.000 0.00 0.00 0.00 4.44
35 36 0.758734 AAAGGGGAAGCAAAGCAACC 59.241 50.000 0.00 0.00 0.00 3.77
36 37 2.483876 GAAAAGGGGAAGCAAAGCAAC 58.516 47.619 0.00 0.00 0.00 4.17
37 38 1.416030 GGAAAAGGGGAAGCAAAGCAA 59.584 47.619 0.00 0.00 0.00 3.91
38 39 1.047801 GGAAAAGGGGAAGCAAAGCA 58.952 50.000 0.00 0.00 0.00 3.91
39 40 1.273606 GAGGAAAAGGGGAAGCAAAGC 59.726 52.381 0.00 0.00 0.00 3.51
40 41 1.895798 GGAGGAAAAGGGGAAGCAAAG 59.104 52.381 0.00 0.00 0.00 2.77
41 42 1.503347 AGGAGGAAAAGGGGAAGCAAA 59.497 47.619 0.00 0.00 0.00 3.68
42 43 1.158007 AGGAGGAAAAGGGGAAGCAA 58.842 50.000 0.00 0.00 0.00 3.91
43 44 1.075536 GAAGGAGGAAAAGGGGAAGCA 59.924 52.381 0.00 0.00 0.00 3.91
44 45 1.356059 AGAAGGAGGAAAAGGGGAAGC 59.644 52.381 0.00 0.00 0.00 3.86
45 46 3.816398 AAGAAGGAGGAAAAGGGGAAG 57.184 47.619 0.00 0.00 0.00 3.46
46 47 3.727391 AGAAAGAAGGAGGAAAAGGGGAA 59.273 43.478 0.00 0.00 0.00 3.97
47 48 3.336676 AGAAAGAAGGAGGAAAAGGGGA 58.663 45.455 0.00 0.00 0.00 4.81
48 49 3.816398 AGAAAGAAGGAGGAAAAGGGG 57.184 47.619 0.00 0.00 0.00 4.79
49 50 4.991776 AGAAGAAAGAAGGAGGAAAAGGG 58.008 43.478 0.00 0.00 0.00 3.95
50 51 6.015856 GGAAAGAAGAAAGAAGGAGGAAAAGG 60.016 42.308 0.00 0.00 0.00 3.11
51 52 6.293680 CGGAAAGAAGAAAGAAGGAGGAAAAG 60.294 42.308 0.00 0.00 0.00 2.27
52 53 5.531287 CGGAAAGAAGAAAGAAGGAGGAAAA 59.469 40.000 0.00 0.00 0.00 2.29
53 54 5.063880 CGGAAAGAAGAAAGAAGGAGGAAA 58.936 41.667 0.00 0.00 0.00 3.13
54 55 4.505039 CCGGAAAGAAGAAAGAAGGAGGAA 60.505 45.833 0.00 0.00 0.00 3.36
55 56 3.008049 CCGGAAAGAAGAAAGAAGGAGGA 59.992 47.826 0.00 0.00 0.00 3.71
56 57 3.244596 ACCGGAAAGAAGAAAGAAGGAGG 60.245 47.826 9.46 0.00 0.00 4.30
57 58 4.009370 ACCGGAAAGAAGAAAGAAGGAG 57.991 45.455 9.46 0.00 0.00 3.69
58 59 4.134563 CAACCGGAAAGAAGAAAGAAGGA 58.865 43.478 9.46 0.00 0.00 3.36
59 60 3.883489 ACAACCGGAAAGAAGAAAGAAGG 59.117 43.478 9.46 0.00 0.00 3.46
60 61 5.273944 CAACAACCGGAAAGAAGAAAGAAG 58.726 41.667 9.46 0.00 0.00 2.85
61 62 4.439563 GCAACAACCGGAAAGAAGAAAGAA 60.440 41.667 9.46 0.00 0.00 2.52
62 63 3.066203 GCAACAACCGGAAAGAAGAAAGA 59.934 43.478 9.46 0.00 0.00 2.52
63 64 3.181491 TGCAACAACCGGAAAGAAGAAAG 60.181 43.478 9.46 0.00 0.00 2.62
64 65 2.755655 TGCAACAACCGGAAAGAAGAAA 59.244 40.909 9.46 0.00 0.00 2.52
65 66 2.370349 TGCAACAACCGGAAAGAAGAA 58.630 42.857 9.46 0.00 0.00 2.52
66 67 2.045561 TGCAACAACCGGAAAGAAGA 57.954 45.000 9.46 0.00 0.00 2.87
67 68 2.459934 GTTGCAACAACCGGAAAGAAG 58.540 47.619 24.52 0.00 0.00 2.85
68 69 1.135333 GGTTGCAACAACCGGAAAGAA 59.865 47.619 29.55 0.00 0.00 2.52
69 70 0.741915 GGTTGCAACAACCGGAAAGA 59.258 50.000 29.55 0.00 0.00 2.52
70 71 0.457851 TGGTTGCAACAACCGGAAAG 59.542 50.000 29.55 0.00 43.15 2.62
71 72 2.579878 TGGTTGCAACAACCGGAAA 58.420 47.368 29.55 4.41 43.15 3.13
72 73 4.338815 TGGTTGCAACAACCGGAA 57.661 50.000 29.55 4.74 43.15 4.30
74 75 0.039256 CATCTGGTTGCAACAACCGG 60.039 55.000 29.55 25.73 45.80 5.28
75 76 0.039256 CCATCTGGTTGCAACAACCG 60.039 55.000 29.55 14.60 43.15 4.44
76 77 3.892200 CCATCTGGTTGCAACAACC 57.108 52.632 29.55 20.13 40.67 3.77
87 88 0.695462 TCCTGGGATCCACCATCTGG 60.695 60.000 15.23 9.13 40.36 3.86
88 89 0.763652 CTCCTGGGATCCACCATCTG 59.236 60.000 15.23 0.00 40.36 2.90
89 90 1.059006 GCTCCTGGGATCCACCATCT 61.059 60.000 15.23 0.00 40.36 2.90
90 91 1.453669 GCTCCTGGGATCCACCATC 59.546 63.158 15.23 0.00 40.36 3.51
91 92 2.081161 GGCTCCTGGGATCCACCAT 61.081 63.158 15.23 0.00 40.36 3.55
92 93 2.692368 GGCTCCTGGGATCCACCA 60.692 66.667 15.23 1.92 41.20 4.17
93 94 2.692368 TGGCTCCTGGGATCCACC 60.692 66.667 15.23 5.22 35.74 4.61
94 95 1.059006 ATCTGGCTCCTGGGATCCAC 61.059 60.000 15.23 3.53 35.74 4.02
95 96 1.058428 CATCTGGCTCCTGGGATCCA 61.058 60.000 15.23 11.16 37.99 3.41
96 97 1.759881 CATCTGGCTCCTGGGATCC 59.240 63.158 1.92 1.92 0.00 3.36
97 98 1.072852 GCATCTGGCTCCTGGGATC 59.927 63.158 0.00 0.00 40.25 3.36
98 99 2.459086 GGCATCTGGCTCCTGGGAT 61.459 63.158 0.00 0.00 44.01 3.85
99 100 3.092511 GGCATCTGGCTCCTGGGA 61.093 66.667 0.00 0.00 44.01 4.37
100 101 3.414193 TGGCATCTGGCTCCTGGG 61.414 66.667 5.30 0.00 44.01 4.45
101 102 2.124403 GTGGCATCTGGCTCCTGG 60.124 66.667 5.30 0.00 44.01 4.45
102 103 2.124403 GGTGGCATCTGGCTCCTG 60.124 66.667 15.29 0.00 46.64 3.86
105 106 3.711059 CTGGGGTGGCATCTGGCTC 62.711 68.421 0.00 1.43 44.01 4.70
106 107 3.736224 CTGGGGTGGCATCTGGCT 61.736 66.667 0.00 0.00 44.01 4.75
107 108 4.052518 ACTGGGGTGGCATCTGGC 62.053 66.667 0.00 0.00 43.74 4.85
108 109 2.273449 GACTGGGGTGGCATCTGG 59.727 66.667 0.00 0.00 0.00 3.86
109 110 2.124983 CGACTGGGGTGGCATCTG 60.125 66.667 0.00 0.00 0.00 2.90
110 111 2.284625 TCGACTGGGGTGGCATCT 60.285 61.111 0.00 0.00 0.00 2.90
111 112 1.327690 TAGTCGACTGGGGTGGCATC 61.328 60.000 28.12 0.00 0.00 3.91
112 113 1.305802 TAGTCGACTGGGGTGGCAT 60.306 57.895 28.12 0.00 0.00 4.40
113 114 2.118732 TAGTCGACTGGGGTGGCA 59.881 61.111 28.12 1.88 0.00 4.92
114 115 0.682209 TAGTAGTCGACTGGGGTGGC 60.682 60.000 28.12 8.83 39.39 5.01
115 116 1.101331 GTAGTAGTCGACTGGGGTGG 58.899 60.000 28.12 0.00 39.39 4.61
116 117 2.125773 AGTAGTAGTCGACTGGGGTG 57.874 55.000 28.12 0.00 39.39 4.61
117 118 2.843113 AGTAGTAGTAGTCGACTGGGGT 59.157 50.000 28.12 11.59 39.39 4.95
118 119 3.557228 AGTAGTAGTAGTCGACTGGGG 57.443 52.381 28.12 0.00 39.39 4.96
119 120 4.376146 GGTAGTAGTAGTAGTCGACTGGG 58.624 52.174 28.12 0.00 39.39 4.45
120 121 4.141846 TGGGTAGTAGTAGTAGTCGACTGG 60.142 50.000 28.12 0.00 39.39 4.00
121 122 5.016051 TGGGTAGTAGTAGTAGTCGACTG 57.984 47.826 28.12 0.00 39.39 3.51
122 123 4.959210 TCTGGGTAGTAGTAGTAGTCGACT 59.041 45.833 23.66 23.66 42.69 4.18
123 124 5.269505 TCTGGGTAGTAGTAGTAGTCGAC 57.730 47.826 7.70 7.70 0.00 4.20
124 125 4.343526 CCTCTGGGTAGTAGTAGTAGTCGA 59.656 50.000 0.00 0.00 0.00 4.20
125 126 4.502950 CCCTCTGGGTAGTAGTAGTAGTCG 60.503 54.167 0.00 0.00 38.25 4.18
126 127 4.971939 CCCTCTGGGTAGTAGTAGTAGTC 58.028 52.174 0.00 0.00 38.25 2.59
141 142 0.683504 ACGTAGTAGGCACCCTCTGG 60.684 60.000 0.00 0.00 41.94 3.86
142 143 0.456221 CACGTAGTAGGCACCCTCTG 59.544 60.000 0.00 0.00 41.61 3.35
143 144 0.683504 CCACGTAGTAGGCACCCTCT 60.684 60.000 0.00 0.00 41.61 3.69
144 145 0.682209 TCCACGTAGTAGGCACCCTC 60.682 60.000 0.00 0.00 41.61 4.30
145 146 0.683504 CTCCACGTAGTAGGCACCCT 60.684 60.000 0.00 0.00 41.61 4.34
146 147 0.682209 TCTCCACGTAGTAGGCACCC 60.682 60.000 0.00 0.00 41.61 4.61
147 148 0.455005 GTCTCCACGTAGTAGGCACC 59.545 60.000 0.00 0.00 41.61 5.01
148 149 0.455005 GGTCTCCACGTAGTAGGCAC 59.545 60.000 0.00 0.00 41.61 5.01
149 150 1.028330 CGGTCTCCACGTAGTAGGCA 61.028 60.000 0.00 0.00 41.61 4.75
150 151 1.726265 CGGTCTCCACGTAGTAGGC 59.274 63.158 0.00 0.00 41.61 3.93
151 152 1.722636 GGCGGTCTCCACGTAGTAGG 61.723 65.000 0.00 0.00 41.61 3.18
152 153 1.726265 GGCGGTCTCCACGTAGTAG 59.274 63.158 0.00 0.00 41.61 2.57
153 154 2.108514 CGGCGGTCTCCACGTAGTA 61.109 63.158 0.00 0.00 41.61 1.82
155 156 3.129502 TCGGCGGTCTCCACGTAG 61.130 66.667 7.21 0.00 0.00 3.51
156 157 3.434319 GTCGGCGGTCTCCACGTA 61.434 66.667 7.21 0.00 0.00 3.57
159 160 4.773117 GTCGTCGGCGGTCTCCAC 62.773 72.222 10.62 0.00 38.89 4.02
162 163 4.477975 CTGGTCGTCGGCGGTCTC 62.478 72.222 10.62 0.00 38.89 3.36
167 168 3.109612 CTACTCCTGGTCGTCGGCG 62.110 68.421 1.15 1.15 39.92 6.46
168 169 1.593296 AACTACTCCTGGTCGTCGGC 61.593 60.000 0.00 0.00 0.00 5.54
169 170 1.669779 CTAACTACTCCTGGTCGTCGG 59.330 57.143 0.00 0.00 0.00 4.79
170 171 1.669779 CCTAACTACTCCTGGTCGTCG 59.330 57.143 0.00 0.00 0.00 5.12
171 172 2.944349 CTCCTAACTACTCCTGGTCGTC 59.056 54.545 0.00 0.00 0.00 4.20
172 173 2.356947 CCTCCTAACTACTCCTGGTCGT 60.357 54.545 0.00 0.00 0.00 4.34
173 174 2.299521 CCTCCTAACTACTCCTGGTCG 58.700 57.143 0.00 0.00 0.00 4.79
174 175 3.053470 AGACCTCCTAACTACTCCTGGTC 60.053 52.174 0.00 0.00 41.95 4.02
175 176 2.927685 AGACCTCCTAACTACTCCTGGT 59.072 50.000 0.00 0.00 0.00 4.00
176 177 3.053544 TGAGACCTCCTAACTACTCCTGG 60.054 52.174 0.00 0.00 0.00 4.45
177 178 4.204012 CTGAGACCTCCTAACTACTCCTG 58.796 52.174 0.00 0.00 0.00 3.86
178 179 3.203487 CCTGAGACCTCCTAACTACTCCT 59.797 52.174 0.00 0.00 0.00 3.69
179 180 3.558033 CCTGAGACCTCCTAACTACTCC 58.442 54.545 0.00 0.00 0.00 3.85
180 181 2.953648 GCCTGAGACCTCCTAACTACTC 59.046 54.545 0.00 0.00 0.00 2.59
181 182 2.312140 TGCCTGAGACCTCCTAACTACT 59.688 50.000 0.00 0.00 0.00 2.57
182 183 2.691011 CTGCCTGAGACCTCCTAACTAC 59.309 54.545 0.00 0.00 0.00 2.73
183 184 2.358300 CCTGCCTGAGACCTCCTAACTA 60.358 54.545 0.00 0.00 0.00 2.24
184 185 1.621072 CCTGCCTGAGACCTCCTAACT 60.621 57.143 0.00 0.00 0.00 2.24
185 186 0.827368 CCTGCCTGAGACCTCCTAAC 59.173 60.000 0.00 0.00 0.00 2.34
186 187 0.710588 TCCTGCCTGAGACCTCCTAA 59.289 55.000 0.00 0.00 0.00 2.69
187 188 0.260230 CTCCTGCCTGAGACCTCCTA 59.740 60.000 0.00 0.00 34.11 2.94
188 189 1.001503 CTCCTGCCTGAGACCTCCT 59.998 63.158 0.00 0.00 34.11 3.69
189 190 2.063378 CCTCCTGCCTGAGACCTCC 61.063 68.421 1.37 0.00 34.11 4.30
190 191 2.730524 GCCTCCTGCCTGAGACCTC 61.731 68.421 1.37 0.00 34.11 3.85
191 192 2.686835 GCCTCCTGCCTGAGACCT 60.687 66.667 1.37 0.00 34.11 3.85
207 208 1.332997 CAATGATCGAAGAGGCAAGGC 59.667 52.381 0.00 0.00 43.63 4.35
208 209 2.636830 ACAATGATCGAAGAGGCAAGG 58.363 47.619 0.00 0.00 43.63 3.61
209 210 3.438087 ACAACAATGATCGAAGAGGCAAG 59.562 43.478 0.00 0.00 43.63 4.01
210 211 3.411446 ACAACAATGATCGAAGAGGCAA 58.589 40.909 0.00 0.00 43.63 4.52
211 212 3.057969 ACAACAATGATCGAAGAGGCA 57.942 42.857 0.00 0.00 43.63 4.75
212 213 4.425577 AAACAACAATGATCGAAGAGGC 57.574 40.909 0.00 0.00 43.63 4.70
213 214 5.626543 CACAAAACAACAATGATCGAAGAGG 59.373 40.000 0.00 0.00 43.63 3.69
214 215 5.116074 GCACAAAACAACAATGATCGAAGAG 59.884 40.000 0.00 0.00 43.63 2.85
215 216 4.975502 GCACAAAACAACAATGATCGAAGA 59.024 37.500 0.00 0.00 45.75 2.87
216 217 4.977963 AGCACAAAACAACAATGATCGAAG 59.022 37.500 0.00 0.00 0.00 3.79
217 218 4.930963 AGCACAAAACAACAATGATCGAA 58.069 34.783 0.00 0.00 0.00 3.71
218 219 4.566545 AGCACAAAACAACAATGATCGA 57.433 36.364 0.00 0.00 0.00 3.59
219 220 4.606673 GCAAGCACAAAACAACAATGATCG 60.607 41.667 0.00 0.00 0.00 3.69
220 221 4.318974 GGCAAGCACAAAACAACAATGATC 60.319 41.667 0.00 0.00 0.00 2.92
221 222 3.560896 GGCAAGCACAAAACAACAATGAT 59.439 39.130 0.00 0.00 0.00 2.45
222 223 2.935201 GGCAAGCACAAAACAACAATGA 59.065 40.909 0.00 0.00 0.00 2.57
223 224 2.937799 AGGCAAGCACAAAACAACAATG 59.062 40.909 0.00 0.00 0.00 2.82
224 225 3.264998 AGGCAAGCACAAAACAACAAT 57.735 38.095 0.00 0.00 0.00 2.71
225 226 2.758736 AGGCAAGCACAAAACAACAA 57.241 40.000 0.00 0.00 0.00 2.83
226 227 2.233431 AGAAGGCAAGCACAAAACAACA 59.767 40.909 0.00 0.00 0.00 3.33
227 228 2.892374 AGAAGGCAAGCACAAAACAAC 58.108 42.857 0.00 0.00 0.00 3.32
228 229 3.608316 AAGAAGGCAAGCACAAAACAA 57.392 38.095 0.00 0.00 0.00 2.83
229 230 4.441356 CCTTAAGAAGGCAAGCACAAAACA 60.441 41.667 3.36 0.00 42.78 2.83
230 231 4.051237 CCTTAAGAAGGCAAGCACAAAAC 58.949 43.478 3.36 0.00 42.78 2.43
231 232 4.320608 CCTTAAGAAGGCAAGCACAAAA 57.679 40.909 3.36 0.00 42.78 2.44
243 244 7.497925 AGTTAAACAAGACTGCCTTAAGAAG 57.502 36.000 3.36 3.86 32.86 2.85
244 245 7.875327 AAGTTAAACAAGACTGCCTTAAGAA 57.125 32.000 3.36 0.00 32.86 2.52
245 246 8.999431 CATAAGTTAAACAAGACTGCCTTAAGA 58.001 33.333 3.36 0.00 32.86 2.10
246 247 8.784043 ACATAAGTTAAACAAGACTGCCTTAAG 58.216 33.333 0.00 0.00 32.86 1.85
247 248 8.685838 ACATAAGTTAAACAAGACTGCCTTAA 57.314 30.769 0.00 0.00 32.86 1.85
248 249 8.154856 AGACATAAGTTAAACAAGACTGCCTTA 58.845 33.333 0.00 0.00 32.86 2.69
249 250 6.998673 AGACATAAGTTAAACAAGACTGCCTT 59.001 34.615 0.00 0.00 34.91 4.35
250 251 6.428159 CAGACATAAGTTAAACAAGACTGCCT 59.572 38.462 0.00 0.00 0.00 4.75
251 252 6.204882 ACAGACATAAGTTAAACAAGACTGCC 59.795 38.462 0.00 0.00 0.00 4.85
252 253 7.190920 ACAGACATAAGTTAAACAAGACTGC 57.809 36.000 0.00 0.00 0.00 4.40
253 254 8.709646 GGTACAGACATAAGTTAAACAAGACTG 58.290 37.037 0.00 0.00 0.00 3.51
254 255 7.876582 GGGTACAGACATAAGTTAAACAAGACT 59.123 37.037 0.00 0.00 0.00 3.24
255 256 7.658575 TGGGTACAGACATAAGTTAAACAAGAC 59.341 37.037 0.00 0.00 0.00 3.01
256 257 7.737869 TGGGTACAGACATAAGTTAAACAAGA 58.262 34.615 0.00 0.00 0.00 3.02
257 258 7.972832 TGGGTACAGACATAAGTTAAACAAG 57.027 36.000 0.00 0.00 0.00 3.16
273 274 4.576463 GGAAGCAACAATATCTGGGTACAG 59.424 45.833 0.00 0.00 46.30 2.74
274 275 4.523083 GGAAGCAACAATATCTGGGTACA 58.477 43.478 0.00 0.00 0.00 2.90
275 276 3.560068 CGGAAGCAACAATATCTGGGTAC 59.440 47.826 0.00 0.00 0.00 3.34
276 277 3.804036 CGGAAGCAACAATATCTGGGTA 58.196 45.455 0.00 0.00 0.00 3.69
277 278 2.643551 CGGAAGCAACAATATCTGGGT 58.356 47.619 0.00 0.00 0.00 4.51
292 293 2.724977 TACACAAGAGTCAGCGGAAG 57.275 50.000 0.00 0.00 0.00 3.46
293 294 2.415491 CGATACACAAGAGTCAGCGGAA 60.415 50.000 0.00 0.00 0.00 4.30
294 295 1.132453 CGATACACAAGAGTCAGCGGA 59.868 52.381 0.00 0.00 0.00 5.54
295 296 1.132453 TCGATACACAAGAGTCAGCGG 59.868 52.381 0.00 0.00 0.00 5.52
296 297 2.445316 CTCGATACACAAGAGTCAGCG 58.555 52.381 0.00 0.00 0.00 5.18
297 298 2.159310 AGCTCGATACACAAGAGTCAGC 60.159 50.000 0.00 0.00 34.69 4.26
298 299 3.773860 AGCTCGATACACAAGAGTCAG 57.226 47.619 0.00 0.00 34.69 3.51
299 300 4.640647 ACATAGCTCGATACACAAGAGTCA 59.359 41.667 0.00 0.00 34.69 3.41
300 301 5.176407 ACATAGCTCGATACACAAGAGTC 57.824 43.478 0.00 0.00 34.69 3.36
301 302 6.885952 ATACATAGCTCGATACACAAGAGT 57.114 37.500 0.00 0.00 34.69 3.24
302 303 6.521477 CGAATACATAGCTCGATACACAAGAG 59.479 42.308 0.00 0.00 34.52 2.85
303 304 6.204108 TCGAATACATAGCTCGATACACAAGA 59.796 38.462 0.00 0.00 36.72 3.02
304 305 6.371389 TCGAATACATAGCTCGATACACAAG 58.629 40.000 0.00 0.00 36.72 3.16
305 306 6.308371 TCGAATACATAGCTCGATACACAA 57.692 37.500 0.00 0.00 36.72 3.33
306 307 5.617087 GCTCGAATACATAGCTCGATACACA 60.617 44.000 0.00 0.00 40.52 3.72
307 308 4.789119 GCTCGAATACATAGCTCGATACAC 59.211 45.833 0.00 0.00 40.52 2.90
308 309 4.142665 GGCTCGAATACATAGCTCGATACA 60.143 45.833 0.00 0.00 40.52 2.29
309 310 4.344448 GGCTCGAATACATAGCTCGATAC 58.656 47.826 0.00 0.00 40.52 2.24
310 311 3.377485 GGGCTCGAATACATAGCTCGATA 59.623 47.826 0.00 0.00 40.52 2.92
311 312 2.164624 GGGCTCGAATACATAGCTCGAT 59.835 50.000 0.00 0.00 40.52 3.59
312 313 1.540267 GGGCTCGAATACATAGCTCGA 59.460 52.381 0.00 0.00 39.16 4.04
313 314 1.542030 AGGGCTCGAATACATAGCTCG 59.458 52.381 0.00 0.00 41.74 5.03
314 315 3.224884 GAGGGCTCGAATACATAGCTC 57.775 52.381 0.00 0.00 36.97 4.09
339 340 6.833933 AGAAACTTTATATTACAAGCCAGGGG 59.166 38.462 0.00 0.00 0.00 4.79
340 341 7.881775 AGAAACTTTATATTACAAGCCAGGG 57.118 36.000 0.00 0.00 0.00 4.45
368 369 9.950680 CAACACAACTCTAGACACAAATAAAAT 57.049 29.630 0.00 0.00 0.00 1.82
369 370 8.952278 ACAACACAACTCTAGACACAAATAAAA 58.048 29.630 0.00 0.00 0.00 1.52
370 371 8.394877 CACAACACAACTCTAGACACAAATAAA 58.605 33.333 0.00 0.00 0.00 1.40
371 372 7.766738 TCACAACACAACTCTAGACACAAATAA 59.233 33.333 0.00 0.00 0.00 1.40
372 373 7.269316 TCACAACACAACTCTAGACACAAATA 58.731 34.615 0.00 0.00 0.00 1.40
373 374 6.112734 TCACAACACAACTCTAGACACAAAT 58.887 36.000 0.00 0.00 0.00 2.32
374 375 5.483811 TCACAACACAACTCTAGACACAAA 58.516 37.500 0.00 0.00 0.00 2.83
375 376 5.079689 TCACAACACAACTCTAGACACAA 57.920 39.130 0.00 0.00 0.00 3.33
376 377 4.729227 TCACAACACAACTCTAGACACA 57.271 40.909 0.00 0.00 0.00 3.72
377 378 6.480320 AGAAATCACAACACAACTCTAGACAC 59.520 38.462 0.00 0.00 0.00 3.67
378 379 6.582636 AGAAATCACAACACAACTCTAGACA 58.417 36.000 0.00 0.00 0.00 3.41
379 380 7.307455 GGAAGAAATCACAACACAACTCTAGAC 60.307 40.741 0.00 0.00 0.00 2.59
380 381 6.706270 GGAAGAAATCACAACACAACTCTAGA 59.294 38.462 0.00 0.00 0.00 2.43
381 382 6.073003 GGGAAGAAATCACAACACAACTCTAG 60.073 42.308 0.00 0.00 0.00 2.43
382 383 5.763204 GGGAAGAAATCACAACACAACTCTA 59.237 40.000 0.00 0.00 0.00 2.43
383 384 4.580580 GGGAAGAAATCACAACACAACTCT 59.419 41.667 0.00 0.00 0.00 3.24
384 385 4.554723 CGGGAAGAAATCACAACACAACTC 60.555 45.833 0.00 0.00 0.00 3.01
385 386 3.315191 CGGGAAGAAATCACAACACAACT 59.685 43.478 0.00 0.00 0.00 3.16
386 387 3.066203 ACGGGAAGAAATCACAACACAAC 59.934 43.478 0.00 0.00 0.00 3.32
387 388 3.066064 CACGGGAAGAAATCACAACACAA 59.934 43.478 0.00 0.00 0.00 3.33
388 389 2.616376 CACGGGAAGAAATCACAACACA 59.384 45.455 0.00 0.00 0.00 3.72
389 390 2.875933 TCACGGGAAGAAATCACAACAC 59.124 45.455 0.00 0.00 0.00 3.32
390 391 3.138304 CTCACGGGAAGAAATCACAACA 58.862 45.455 0.00 0.00 0.00 3.33
391 392 3.139077 ACTCACGGGAAGAAATCACAAC 58.861 45.455 0.00 0.00 0.00 3.32
392 393 3.071023 AGACTCACGGGAAGAAATCACAA 59.929 43.478 0.00 0.00 0.00 3.33
393 394 2.632996 AGACTCACGGGAAGAAATCACA 59.367 45.455 0.00 0.00 0.00 3.58
394 395 3.320673 AGACTCACGGGAAGAAATCAC 57.679 47.619 0.00 0.00 0.00 3.06
395 396 4.351874 AAAGACTCACGGGAAGAAATCA 57.648 40.909 0.00 0.00 0.00 2.57
396 397 6.819146 AGATTAAAGACTCACGGGAAGAAATC 59.181 38.462 0.00 0.00 0.00 2.17
397 398 6.712276 AGATTAAAGACTCACGGGAAGAAAT 58.288 36.000 0.00 0.00 0.00 2.17
398 399 6.110411 AGATTAAAGACTCACGGGAAGAAA 57.890 37.500 0.00 0.00 0.00 2.52
399 400 5.740290 AGATTAAAGACTCACGGGAAGAA 57.260 39.130 0.00 0.00 0.00 2.52
400 401 5.740290 AAGATTAAAGACTCACGGGAAGA 57.260 39.130 0.00 0.00 0.00 2.87
401 402 8.391106 CAATTAAGATTAAAGACTCACGGGAAG 58.609 37.037 0.00 0.00 0.00 3.46
402 403 7.881232 ACAATTAAGATTAAAGACTCACGGGAA 59.119 33.333 0.00 0.00 0.00 3.97
403 404 7.391620 ACAATTAAGATTAAAGACTCACGGGA 58.608 34.615 0.00 0.00 0.00 5.14
404 405 7.611213 ACAATTAAGATTAAAGACTCACGGG 57.389 36.000 0.00 0.00 0.00 5.28
405 406 9.146984 TGTACAATTAAGATTAAAGACTCACGG 57.853 33.333 0.00 0.00 0.00 4.94
406 407 9.953825 GTGTACAATTAAGATTAAAGACTCACG 57.046 33.333 0.00 0.00 0.00 4.35
414 415 9.900710 ACGCAAATGTGTACAATTAAGATTAAA 57.099 25.926 0.00 0.00 36.94 1.52
415 416 9.335891 CACGCAAATGTGTACAATTAAGATTAA 57.664 29.630 0.00 0.00 36.94 1.40
416 417 8.888332 CACGCAAATGTGTACAATTAAGATTA 57.112 30.769 0.00 0.00 36.94 1.75
417 418 7.795431 CACGCAAATGTGTACAATTAAGATT 57.205 32.000 0.00 0.00 36.94 2.40
430 431 5.868257 ACACTAATCATACACGCAAATGTG 58.132 37.500 0.00 0.00 45.41 3.21
431 432 6.237728 CGTACACTAATCATACACGCAAATGT 60.238 38.462 0.00 0.00 36.56 2.71
432 433 6.020201 TCGTACACTAATCATACACGCAAATG 60.020 38.462 0.00 0.00 0.00 2.32
433 434 6.037726 TCGTACACTAATCATACACGCAAAT 58.962 36.000 0.00 0.00 0.00 2.32
434 435 5.400703 TCGTACACTAATCATACACGCAAA 58.599 37.500 0.00 0.00 0.00 3.68
435 436 4.984205 TCGTACACTAATCATACACGCAA 58.016 39.130 0.00 0.00 0.00 4.85
436 437 4.619437 TCGTACACTAATCATACACGCA 57.381 40.909 0.00 0.00 0.00 5.24
437 438 5.684184 TCAATCGTACACTAATCATACACGC 59.316 40.000 0.00 0.00 0.00 5.34
438 439 7.673810 TTCAATCGTACACTAATCATACACG 57.326 36.000 0.00 0.00 0.00 4.49
456 457 2.564771 TGTGATGCCTCCGATTCAATC 58.435 47.619 0.00 0.00 0.00 2.67
457 458 2.715749 TGTGATGCCTCCGATTCAAT 57.284 45.000 0.00 0.00 0.00 2.57
458 459 2.488204 TTGTGATGCCTCCGATTCAA 57.512 45.000 0.00 0.00 0.00 2.69
459 460 2.291365 CATTGTGATGCCTCCGATTCA 58.709 47.619 0.00 0.00 0.00 2.57
460 461 1.605710 CCATTGTGATGCCTCCGATTC 59.394 52.381 0.00 0.00 31.67 2.52
461 462 1.683943 CCATTGTGATGCCTCCGATT 58.316 50.000 0.00 0.00 31.67 3.34
462 463 0.820891 GCCATTGTGATGCCTCCGAT 60.821 55.000 0.00 0.00 31.67 4.18
463 464 1.451927 GCCATTGTGATGCCTCCGA 60.452 57.895 0.00 0.00 31.67 4.55
464 465 0.179048 TAGCCATTGTGATGCCTCCG 60.179 55.000 0.00 0.00 31.67 4.63
465 466 2.283145 ATAGCCATTGTGATGCCTCC 57.717 50.000 0.00 0.00 31.67 4.30
466 467 4.252073 CTCTATAGCCATTGTGATGCCTC 58.748 47.826 0.00 0.00 31.67 4.70
467 468 3.558746 GCTCTATAGCCATTGTGATGCCT 60.559 47.826 0.00 0.00 43.40 4.75
468 469 2.746362 GCTCTATAGCCATTGTGATGCC 59.254 50.000 0.00 0.00 43.40 4.40
481 482 5.260424 TCTATTCTCCCTGCAGCTCTATAG 58.740 45.833 8.66 10.68 0.00 1.31
482 483 5.014649 TCTCTATTCTCCCTGCAGCTCTATA 59.985 44.000 8.66 1.34 0.00 1.31
483 484 4.088634 CTCTATTCTCCCTGCAGCTCTAT 58.911 47.826 8.66 0.13 0.00 1.98
484 485 3.139211 TCTCTATTCTCCCTGCAGCTCTA 59.861 47.826 8.66 0.00 0.00 2.43
485 486 2.091389 TCTCTATTCTCCCTGCAGCTCT 60.091 50.000 8.66 0.00 0.00 4.09
486 487 2.315176 TCTCTATTCTCCCTGCAGCTC 58.685 52.381 8.66 0.00 0.00 4.09
499 500 4.156739 CCGCTTTTCCTTTGCTTCTCTATT 59.843 41.667 0.00 0.00 0.00 1.73
502 503 1.882623 CCGCTTTTCCTTTGCTTCTCT 59.117 47.619 0.00 0.00 0.00 3.10
515 516 1.268539 CGTTGCTTTCTCACCGCTTTT 60.269 47.619 0.00 0.00 0.00 2.27
523 528 1.336755 GGCTTTTCCGTTGCTTTCTCA 59.663 47.619 0.00 0.00 0.00 3.27
533 538 1.892338 CCATGCATGGCTTTTCCGT 59.108 52.632 31.95 0.00 41.75 4.69
582 587 2.735444 GCTTAATTTTCTTGGCGGCCTC 60.735 50.000 21.46 0.00 0.00 4.70
585 590 2.262211 CAGCTTAATTTTCTTGGCGGC 58.738 47.619 0.00 0.00 0.00 6.53
613 625 1.068472 CCCCTAAGCTATGTCTACGCG 60.068 57.143 3.53 3.53 0.00 6.01
657 669 5.941788 AGTATTCCAACTAGGCCATAAAGG 58.058 41.667 5.01 0.54 41.84 3.11
670 682 5.705905 AGGCACTACAAGAAAGTATTCCAAC 59.294 40.000 0.00 0.00 36.02 3.77
693 783 3.999046 TGAGCATATGCATGTGGAGTAG 58.001 45.455 28.62 0.00 45.16 2.57
698 788 4.689071 ACAATTTGAGCATATGCATGTGG 58.311 39.130 28.62 13.83 45.16 4.17
722 812 7.064609 TGTTAAACGAAGATAGCATTTGGAGAG 59.935 37.037 0.00 0.00 0.00 3.20
773 870 6.041182 AGCTTAATTTGCTAATGCCATGATCA 59.959 34.615 0.00 0.00 39.21 2.92
774 871 6.365247 CAGCTTAATTTGCTAATGCCATGATC 59.635 38.462 0.00 0.00 38.92 2.92
775 872 6.220930 CAGCTTAATTTGCTAATGCCATGAT 58.779 36.000 0.00 0.00 38.92 2.45
776 873 5.593968 CAGCTTAATTTGCTAATGCCATGA 58.406 37.500 0.00 0.00 38.92 3.07
777 874 4.210537 GCAGCTTAATTTGCTAATGCCATG 59.789 41.667 5.51 0.00 38.92 3.66
778 875 4.141892 TGCAGCTTAATTTGCTAATGCCAT 60.142 37.500 11.26 0.00 40.87 4.40
779 876 3.195182 TGCAGCTTAATTTGCTAATGCCA 59.805 39.130 11.26 0.00 40.87 4.92
820 917 9.184523 CCAAAGGGTGTATTTATAGTCATGAAA 57.815 33.333 0.00 0.00 0.00 2.69
848 962 0.253160 TGACCATGGGGCTCCTAAGT 60.253 55.000 18.09 0.00 37.90 2.24
892 1006 4.748144 CCAGGGGTCAGCCAAGCC 62.748 72.222 0.00 0.00 36.17 4.35
942 1059 8.114905 GCAACAACTAATTAAGGAATCGTACTC 58.885 37.037 0.00 0.00 0.00 2.59
970 1087 1.833630 TGAGAGGTGGTCTATGCCAAG 59.166 52.381 0.00 0.00 40.68 3.61
974 1091 0.826715 TGCTGAGAGGTGGTCTATGC 59.173 55.000 0.00 0.00 34.71 3.14
977 1094 2.009681 TGTTGCTGAGAGGTGGTCTA 57.990 50.000 0.00 0.00 34.71 2.59
978 1095 1.131638 TTGTTGCTGAGAGGTGGTCT 58.868 50.000 0.00 0.00 38.71 3.85
1069 1195 4.154347 GAGGAGCCTGGCCGTGAG 62.154 72.222 16.57 0.00 0.00 3.51
1098 1224 3.499737 GCCAACCTGCGATGGACG 61.500 66.667 1.07 0.00 45.66 4.79
1218 1345 3.740115 GACTTGGTACTTTGGCTTCTCA 58.260 45.455 0.00 0.00 0.00 3.27
1270 1397 3.753272 CCGTCCTCTTGATCAAACAATGT 59.247 43.478 9.88 0.00 0.00 2.71
1409 1542 1.747355 CCTGGTTGCTCCTTATTGCAG 59.253 52.381 0.00 0.00 40.46 4.41
1517 1653 3.131396 GGAACACAACATCACGAGAAGT 58.869 45.455 0.00 0.00 0.00 3.01
1594 1734 7.282332 ACATTATCGATCTCACTCTCATCAA 57.718 36.000 0.00 0.00 0.00 2.57
1832 3713 0.271005 AAGTATAGGGGGTGGGGGAG 59.729 60.000 0.00 0.00 0.00 4.30
1833 3714 0.732584 AAAGTATAGGGGGTGGGGGA 59.267 55.000 0.00 0.00 0.00 4.81
1838 3719 3.477530 GCTAAGCAAAGTATAGGGGGTG 58.522 50.000 0.00 0.00 0.00 4.61
1839 3720 2.442126 GGCTAAGCAAAGTATAGGGGGT 59.558 50.000 0.00 0.00 0.00 4.95
1840 3721 2.550208 CGGCTAAGCAAAGTATAGGGGG 60.550 54.545 0.00 0.00 0.00 5.40
1876 3757 1.408822 GGGTAGTGGGCAAGAAGATGG 60.409 57.143 0.00 0.00 0.00 3.51
1896 4256 1.298859 CGAGAACTTTGGAAGGGCGG 61.299 60.000 0.00 0.00 0.00 6.13
1920 4280 1.939838 GCAACCTAGGTGTCCTTGTCG 60.940 57.143 17.14 0.00 34.61 4.35
1962 4322 0.684153 ATACCTGCAATGTGGTGGGC 60.684 55.000 5.64 0.00 37.74 5.36
1966 4326 2.888212 ACCAAATACCTGCAATGTGGT 58.112 42.857 5.96 5.96 39.67 4.16
2001 4361 0.548510 GCAAGAGATACCAAGGGGCT 59.451 55.000 0.00 0.00 37.90 5.19
2048 4408 1.064758 TCTTCCAATGCGGCCAACTAT 60.065 47.619 2.24 0.00 33.14 2.12
2055 4415 1.576356 CTCTACTCTTCCAATGCGGC 58.424 55.000 0.00 0.00 33.14 6.53
2110 4470 6.126409 ACTCTTTTTGTGGGTGTTCATTCTA 58.874 36.000 0.00 0.00 0.00 2.10
2130 4490 4.526262 ACTGCTATCTGAGACACAAACTCT 59.474 41.667 0.00 0.00 35.66 3.24
2137 4497 6.928979 TTACTAGACTGCTATCTGAGACAC 57.071 41.667 0.00 0.00 0.00 3.67
2217 4578 1.570347 TTGTTCGGATTTCGCCACGG 61.570 55.000 0.00 0.00 39.05 4.94
2240 4601 6.148948 TCATCAAAATAAAGCCACACTTTCG 58.851 36.000 0.00 0.00 45.78 3.46
2268 4629 7.647715 CCACAATGTTTACGAAAAGAATCTTGT 59.352 33.333 0.00 0.00 0.00 3.16
2281 4642 5.024768 TCGTGATTTCCACAATGTTTACG 57.975 39.130 0.00 0.00 45.98 3.18
2297 4658 1.487976 AGATGGCCACAATCTCGTGAT 59.512 47.619 8.16 0.00 39.34 3.06
2301 4662 2.158986 AGAAGAGATGGCCACAATCTCG 60.159 50.000 23.06 0.00 43.98 4.04
2330 4772 1.449353 CACCCATGCCTCTCTAGCC 59.551 63.158 0.00 0.00 0.00 3.93
2362 4804 4.158394 ACACATGTATTGCAAGGGTGAATC 59.842 41.667 19.08 1.34 30.41 2.52
2383 4825 1.938585 ATCTTGGTCGGGAGAGAACA 58.061 50.000 0.00 0.00 41.26 3.18
2428 4870 0.325671 AATCTTGCTCCCCCTCGAGA 60.326 55.000 15.71 0.00 30.97 4.04
2429 4871 0.105778 GAATCTTGCTCCCCCTCGAG 59.894 60.000 5.13 5.13 0.00 4.04
2430 4872 0.325671 AGAATCTTGCTCCCCCTCGA 60.326 55.000 0.00 0.00 0.00 4.04
2431 4873 0.105778 GAGAATCTTGCTCCCCCTCG 59.894 60.000 0.00 0.00 0.00 4.63
2438 4880 6.500041 ACTACTGTAATCGAGAATCTTGCTC 58.500 40.000 0.00 0.00 0.00 4.26
2442 4884 9.570488 GTGTTTACTACTGTAATCGAGAATCTT 57.430 33.333 0.00 0.00 38.31 2.40
2443 4885 8.737175 TGTGTTTACTACTGTAATCGAGAATCT 58.263 33.333 0.00 0.00 38.31 2.40
2450 4892 9.537848 GGAATTTTGTGTTTACTACTGTAATCG 57.462 33.333 0.00 0.00 38.31 3.34
2453 4895 8.842280 CCTGGAATTTTGTGTTTACTACTGTAA 58.158 33.333 0.00 0.00 36.92 2.41
2465 4907 5.104277 TCGGGATATACCTGGAATTTTGTGT 60.104 40.000 1.51 0.00 44.73 3.72
2467 4909 5.640158 TCGGGATATACCTGGAATTTTGT 57.360 39.130 1.51 0.00 44.73 2.83
2473 4915 5.605069 TCTTTTGATCGGGATATACCTGGAA 59.395 40.000 1.51 0.00 44.73 3.53
2479 4921 9.665264 GTTTGAAATCTTTTGATCGGGATATAC 57.335 33.333 0.00 0.00 38.40 1.47


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.