Multiple sequence alignment - TraesCS5A01G286000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G286000 chr5A 100.000 5041 0 0 1 5041 493819318 493814278 0.000000e+00 9310
1 TraesCS5A01G286000 chr5A 94.917 964 45 2 4076 5036 567745723 567746685 0.000000e+00 1506
2 TraesCS5A01G286000 chr5A 98.431 510 8 0 1 510 704841248 704841757 0.000000e+00 898
3 TraesCS5A01G286000 chr5A 97.566 493 11 1 18 510 5694474 5693983 0.000000e+00 843
4 TraesCS5A01G286000 chr5A 97.425 466 11 1 1 466 5694971 5694507 0.000000e+00 793
5 TraesCS5A01G286000 chr5A 83.838 792 84 23 1390 2147 493779344 493780125 0.000000e+00 713
6 TraesCS5A01G286000 chr5A 82.107 788 86 26 1390 2148 493662174 493662935 1.540000e-174 623
7 TraesCS5A01G286000 chr5A 94.161 411 16 5 511 913 673087458 673087048 1.990000e-173 619
8 TraesCS5A01G286000 chr5A 95.413 327 15 0 914 1240 5693992 5693666 5.780000e-144 521
9 TraesCS5A01G286000 chr5A 95.399 326 15 0 908 1233 704841742 704842067 2.080000e-143 520
10 TraesCS5A01G286000 chr5A 91.450 269 20 2 3065 3333 535518502 535518767 2.870000e-97 366
11 TraesCS5A01G286000 chr5A 89.850 266 25 2 3049 3313 388577912 388578176 1.740000e-89 340
12 TraesCS5A01G286000 chr5D 89.646 1835 93 45 1235 3030 390503973 390505749 0.000000e+00 2246
13 TraesCS5A01G286000 chr5D 91.055 749 54 11 3329 4075 390505777 390506514 0.000000e+00 1000
14 TraesCS5A01G286000 chr5D 83.290 778 84 25 1391 2148 390371479 390372230 0.000000e+00 675
15 TraesCS5A01G286000 chr4A 94.317 1179 33 17 61 1233 558645490 558644340 0.000000e+00 1775
16 TraesCS5A01G286000 chr4A 95.094 958 43 2 4082 5036 13270970 13270014 0.000000e+00 1506
17 TraesCS5A01G286000 chr4A 97.304 408 6 3 511 913 628853740 628854147 0.000000e+00 688
18 TraesCS5A01G286000 chr4A 91.154 260 19 3 3069 3328 286747588 286747843 2.890000e-92 350
19 TraesCS5A01G286000 chr7B 98.546 963 10 2 4082 5041 393402549 393401588 0.000000e+00 1698
20 TraesCS5A01G286000 chr7B 98.027 963 15 2 4082 5041 565090436 565089475 0.000000e+00 1670
21 TraesCS5A01G286000 chr7B 94.990 958 45 1 4082 5036 61062922 61061965 0.000000e+00 1500
22 TraesCS5A01G286000 chr6B 96.154 962 31 2 4082 5037 366630389 366629428 0.000000e+00 1567
23 TraesCS5A01G286000 chr2B 94.969 974 41 4 4076 5041 197239764 197240737 0.000000e+00 1520
24 TraesCS5A01G286000 chr2B 90.769 260 22 2 3069 3328 465133179 465132922 3.740000e-91 346
25 TraesCS5A01G286000 chr6A 94.813 964 46 2 4076 5036 249294466 249295428 0.000000e+00 1500
26 TraesCS5A01G286000 chr6A 97.451 510 13 0 1 510 551839510 551839001 0.000000e+00 870
27 TraesCS5A01G286000 chr6A 96.098 410 9 5 511 913 153106096 153105687 0.000000e+00 662
28 TraesCS5A01G286000 chr6A 94.062 320 16 1 914 1233 551839010 551838694 2.730000e-132 483
29 TraesCS5A01G286000 chr2A 94.173 961 52 2 4084 5041 551334309 551335268 0.000000e+00 1461
30 TraesCS5A01G286000 chr2A 97.647 510 10 2 1 510 80986391 80985884 0.000000e+00 874
31 TraesCS5A01G286000 chr2A 97.456 511 12 1 1 510 53444414 53443904 0.000000e+00 870
32 TraesCS5A01G286000 chr2A 97.451 510 10 1 1 510 753014810 753015316 0.000000e+00 867
33 TraesCS5A01G286000 chr2A 96.341 410 9 4 510 913 719334644 719334235 0.000000e+00 669
34 TraesCS5A01G286000 chr2A 95.874 412 8 6 511 913 461165303 461165714 0.000000e+00 658
35 TraesCS5A01G286000 chr2A 95.413 327 15 0 914 1240 80985893 80985567 5.780000e-144 521
36 TraesCS5A01G286000 chr2A 94.785 326 17 0 908 1233 753015301 753015626 4.500000e-140 508
37 TraesCS5A01G286000 chr2A 94.062 320 19 0 914 1233 53443913 53443594 2.110000e-133 486
38 TraesCS5A01G286000 chr5B 89.802 706 44 17 3384 4075 470621105 470621796 0.000000e+00 880
39 TraesCS5A01G286000 chr5B 80.948 1013 130 41 1390 2360 470512099 470513090 0.000000e+00 743
40 TraesCS5A01G286000 chr5B 80.140 997 123 48 1390 2360 470436012 470436959 0.000000e+00 675
41 TraesCS5A01G286000 chr5B 96.319 326 9 1 1588 1913 470604047 470604369 2.670000e-147 532
42 TraesCS5A01G286000 chr5B 86.555 476 40 8 1979 2444 470604384 470604845 2.090000e-138 503
43 TraesCS5A01G286000 chr5B 82.012 517 75 15 1394 1898 469125060 469124550 1.680000e-114 424
44 TraesCS5A01G286000 chr5B 92.437 238 10 4 1309 1538 470603811 470604048 2.910000e-87 333
45 TraesCS5A01G286000 chr5B 87.456 287 34 2 2701 2986 470605053 470605338 3.760000e-86 329
46 TraesCS5A01G286000 chr1A 97.451 510 13 0 1 510 478363850 478364359 0.000000e+00 870
47 TraesCS5A01G286000 chr1A 96.088 409 7 6 511 913 448350623 448351028 0.000000e+00 658
48 TraesCS5A01G286000 chr1A 94.753 324 17 0 908 1231 478364344 478364667 5.820000e-139 505
49 TraesCS5A01G286000 chr1A 93.865 326 20 0 908 1233 146189095 146189420 4.530000e-135 492
50 TraesCS5A01G286000 chr1A 89.394 264 25 2 3065 3328 537981152 537981412 3.760000e-86 329
51 TraesCS5A01G286000 chr3D 93.576 576 31 4 1392 1966 564806674 564807244 0.000000e+00 854
52 TraesCS5A01G286000 chr3D 85.249 522 60 13 1945 2456 564807262 564807776 5.780000e-144 521
53 TraesCS5A01G286000 chr3D 83.476 466 65 10 3571 4030 564808648 564809107 1.680000e-114 424
54 TraesCS5A01G286000 chrUn 97.073 410 6 4 511 915 955770 955362 0.000000e+00 686
55 TraesCS5A01G286000 chr7A 96.585 410 7 4 511 913 612998750 612998341 0.000000e+00 673
56 TraesCS5A01G286000 chr3B 89.526 401 31 3 1319 1708 752293248 752292848 9.750000e-137 497
57 TraesCS5A01G286000 chr3B 82.533 458 64 12 3578 4030 752304863 752305309 6.120000e-104 388
58 TraesCS5A01G286000 chr3B 91.154 260 21 2 1708 1966 752301606 752301864 8.030000e-93 351
59 TraesCS5A01G286000 chr3B 87.952 249 23 7 2015 2257 752301949 752302196 2.300000e-73 287
60 TraesCS5A01G286000 chr3B 87.500 200 17 5 2261 2456 752302361 752302556 1.830000e-54 224
61 TraesCS5A01G286000 chr3A 91.120 259 20 2 3065 3323 468323485 468323740 1.040000e-91 348
62 TraesCS5A01G286000 chr3A 90.769 260 21 2 3064 3323 721830157 721830413 1.340000e-90 344
63 TraesCS5A01G286000 chr1D 90.458 262 21 4 3068 3328 348665151 348664893 4.830000e-90 342
64 TraesCS5A01G286000 chr6D 89.338 272 25 4 3064 3334 469275447 469275715 6.250000e-89 339


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G286000 chr5A 493814278 493819318 5040 True 9310.000000 9310 100.000000 1 5041 1 chr5A.!!$R1 5040
1 TraesCS5A01G286000 chr5A 567745723 567746685 962 False 1506.000000 1506 94.917000 4076 5036 1 chr5A.!!$F5 960
2 TraesCS5A01G286000 chr5A 5693666 5694971 1305 True 719.000000 843 96.801333 1 1240 3 chr5A.!!$R3 1239
3 TraesCS5A01G286000 chr5A 493779344 493780125 781 False 713.000000 713 83.838000 1390 2147 1 chr5A.!!$F3 757
4 TraesCS5A01G286000 chr5A 704841248 704842067 819 False 709.000000 898 96.915000 1 1233 2 chr5A.!!$F6 1232
5 TraesCS5A01G286000 chr5A 493662174 493662935 761 False 623.000000 623 82.107000 1390 2148 1 chr5A.!!$F2 758
6 TraesCS5A01G286000 chr5D 390503973 390506514 2541 False 1623.000000 2246 90.350500 1235 4075 2 chr5D.!!$F2 2840
7 TraesCS5A01G286000 chr5D 390371479 390372230 751 False 675.000000 675 83.290000 1391 2148 1 chr5D.!!$F1 757
8 TraesCS5A01G286000 chr4A 558644340 558645490 1150 True 1775.000000 1775 94.317000 61 1233 1 chr4A.!!$R2 1172
9 TraesCS5A01G286000 chr4A 13270014 13270970 956 True 1506.000000 1506 95.094000 4082 5036 1 chr4A.!!$R1 954
10 TraesCS5A01G286000 chr7B 393401588 393402549 961 True 1698.000000 1698 98.546000 4082 5041 1 chr7B.!!$R2 959
11 TraesCS5A01G286000 chr7B 565089475 565090436 961 True 1670.000000 1670 98.027000 4082 5041 1 chr7B.!!$R3 959
12 TraesCS5A01G286000 chr7B 61061965 61062922 957 True 1500.000000 1500 94.990000 4082 5036 1 chr7B.!!$R1 954
13 TraesCS5A01G286000 chr6B 366629428 366630389 961 True 1567.000000 1567 96.154000 4082 5037 1 chr6B.!!$R1 955
14 TraesCS5A01G286000 chr2B 197239764 197240737 973 False 1520.000000 1520 94.969000 4076 5041 1 chr2B.!!$F1 965
15 TraesCS5A01G286000 chr6A 249294466 249295428 962 False 1500.000000 1500 94.813000 4076 5036 1 chr6A.!!$F1 960
16 TraesCS5A01G286000 chr6A 551838694 551839510 816 True 676.500000 870 95.756500 1 1233 2 chr6A.!!$R2 1232
17 TraesCS5A01G286000 chr2A 551334309 551335268 959 False 1461.000000 1461 94.173000 4084 5041 1 chr2A.!!$F2 957
18 TraesCS5A01G286000 chr2A 80985567 80986391 824 True 697.500000 874 96.530000 1 1240 2 chr2A.!!$R3 1239
19 TraesCS5A01G286000 chr2A 753014810 753015626 816 False 687.500000 867 96.118000 1 1233 2 chr2A.!!$F3 1232
20 TraesCS5A01G286000 chr2A 53443594 53444414 820 True 678.000000 870 95.759000 1 1233 2 chr2A.!!$R2 1232
21 TraesCS5A01G286000 chr5B 470621105 470621796 691 False 880.000000 880 89.802000 3384 4075 1 chr5B.!!$F3 691
22 TraesCS5A01G286000 chr5B 470512099 470513090 991 False 743.000000 743 80.948000 1390 2360 1 chr5B.!!$F2 970
23 TraesCS5A01G286000 chr5B 470436012 470436959 947 False 675.000000 675 80.140000 1390 2360 1 chr5B.!!$F1 970
24 TraesCS5A01G286000 chr5B 470603811 470605338 1527 False 424.250000 532 90.691750 1309 2986 4 chr5B.!!$F4 1677
25 TraesCS5A01G286000 chr5B 469124550 469125060 510 True 424.000000 424 82.012000 1394 1898 1 chr5B.!!$R1 504
26 TraesCS5A01G286000 chr1A 478363850 478364667 817 False 687.500000 870 96.102000 1 1231 2 chr1A.!!$F4 1230
27 TraesCS5A01G286000 chr3D 564806674 564809107 2433 False 599.666667 854 87.433667 1392 4030 3 chr3D.!!$F1 2638
28 TraesCS5A01G286000 chr3B 752301606 752305309 3703 False 312.500000 388 87.284750 1708 4030 4 chr3B.!!$F1 2322

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
898 1797 0.031449 GCTATGTGGAGCTCGGTCTC 59.969 60.0 7.83 0.0 39.50 3.36 F
902 1801 0.037734 TGTGGAGCTCGGTCTCTGTA 59.962 55.0 7.83 0.0 33.70 2.74 F
905 1804 0.031449 GGAGCTCGGTCTCTGTATGC 59.969 60.0 7.83 0.0 33.70 3.14 F
1548 2455 0.877071 TCGTCGTCTACTTCGCCTTT 59.123 50.0 0.00 0.0 0.00 3.11 F
2741 4161 0.885196 TTAAAATGTGTGCGGGCCTC 59.115 50.0 0.84 0.0 0.00 4.70 F
3306 4732 0.042188 CGCAAATCCAATACGCGGAG 60.042 55.0 12.47 0.0 42.13 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2544 3877 0.163788 CGTGTGCGTCCTGTTCATTC 59.836 55.000 0.00 0.00 0.00 2.67 R
2757 4177 1.073763 TGCTGTAAATGTGGTGCTCCT 59.926 47.619 6.34 0.00 34.23 3.69 R
2875 4301 2.540383 ACCTAGCTCTCAATGTGGTGA 58.460 47.619 0.00 0.00 0.00 4.02 R
3285 4711 0.315869 CCGCGTATTGGATTTGCGTC 60.316 55.000 4.92 0.00 46.77 5.19 R
3630 6700 1.070134 GTCAAGCCTAGTCCACACACA 59.930 52.381 0.00 0.00 0.00 3.72 R
4837 7927 0.036732 ATTGCTCGGTCCAGAAAGCA 59.963 50.000 2.09 2.09 42.66 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 9.724839 TTTGCATACTTTTTGTAGTTTCAGTAC 57.275 29.630 0.00 0.00 34.24 2.73
99 100 7.007116 AGAGATATCCACTTAGTGCACATCTA 58.993 38.462 21.04 0.00 29.49 1.98
113 114 8.114331 AGTGCACATCTATTGAGATTCAAAAA 57.886 30.769 21.04 0.00 40.68 1.94
503 1402 4.363991 AAGTCTGAGGAATTGTCAAGCT 57.636 40.909 0.00 0.00 0.00 3.74
504 1403 4.363991 AGTCTGAGGAATTGTCAAGCTT 57.636 40.909 0.00 0.00 0.00 3.74
505 1404 4.723309 AGTCTGAGGAATTGTCAAGCTTT 58.277 39.130 0.00 0.00 0.00 3.51
506 1405 4.518211 AGTCTGAGGAATTGTCAAGCTTTG 59.482 41.667 0.00 0.00 0.00 2.77
507 1406 4.276926 GTCTGAGGAATTGTCAAGCTTTGT 59.723 41.667 0.00 0.00 0.00 2.83
508 1407 4.276678 TCTGAGGAATTGTCAAGCTTTGTG 59.723 41.667 0.00 0.00 0.00 3.33
509 1408 3.953612 TGAGGAATTGTCAAGCTTTGTGT 59.046 39.130 0.00 0.00 0.00 3.72
510 1409 4.202040 TGAGGAATTGTCAAGCTTTGTGTG 60.202 41.667 0.00 0.00 0.00 3.82
511 1410 3.953612 AGGAATTGTCAAGCTTTGTGTGA 59.046 39.130 0.00 0.00 0.00 3.58
512 1411 4.037208 AGGAATTGTCAAGCTTTGTGTGAG 59.963 41.667 0.00 0.00 0.00 3.51
513 1412 4.202050 GGAATTGTCAAGCTTTGTGTGAGT 60.202 41.667 0.00 0.00 0.00 3.41
514 1413 3.763097 TTGTCAAGCTTTGTGTGAGTG 57.237 42.857 0.00 0.00 0.00 3.51
515 1414 2.984562 TGTCAAGCTTTGTGTGAGTGA 58.015 42.857 0.00 0.00 0.00 3.41
516 1415 2.938451 TGTCAAGCTTTGTGTGAGTGAG 59.062 45.455 0.00 0.00 0.00 3.51
517 1416 2.289002 GTCAAGCTTTGTGTGAGTGAGG 59.711 50.000 0.00 0.00 0.00 3.86
518 1417 1.002033 CAAGCTTTGTGTGAGTGAGGC 60.002 52.381 0.00 0.00 0.00 4.70
519 1418 0.882042 AGCTTTGTGTGAGTGAGGCG 60.882 55.000 0.00 0.00 0.00 5.52
520 1419 1.160329 GCTTTGTGTGAGTGAGGCGT 61.160 55.000 0.00 0.00 0.00 5.68
521 1420 0.861837 CTTTGTGTGAGTGAGGCGTC 59.138 55.000 0.00 0.00 0.00 5.19
522 1421 0.874175 TTTGTGTGAGTGAGGCGTCG 60.874 55.000 1.39 0.00 0.00 5.12
523 1422 3.106407 GTGTGAGTGAGGCGTCGC 61.106 66.667 9.22 9.22 0.00 5.19
524 1423 3.601685 TGTGAGTGAGGCGTCGCA 61.602 61.111 20.50 7.43 35.46 5.10
525 1424 2.807045 GTGAGTGAGGCGTCGCAG 60.807 66.667 20.50 0.00 35.46 5.18
526 1425 2.983592 TGAGTGAGGCGTCGCAGA 60.984 61.111 20.50 4.94 35.46 4.26
527 1426 2.202544 GAGTGAGGCGTCGCAGAG 60.203 66.667 20.50 0.00 36.95 3.35
528 1427 3.691744 GAGTGAGGCGTCGCAGAGG 62.692 68.421 20.50 0.00 46.27 3.69
539 1438 4.496336 GCAGAGGCCGGGCTTCAT 62.496 66.667 33.28 18.32 37.11 2.57
540 1439 2.515523 CAGAGGCCGGGCTTCATG 60.516 66.667 33.28 25.15 37.11 3.07
541 1440 3.801997 AGAGGCCGGGCTTCATGG 61.802 66.667 33.28 0.00 37.11 3.66
542 1441 3.797353 GAGGCCGGGCTTCATGGA 61.797 66.667 33.28 0.00 34.72 3.41
543 1442 3.764160 GAGGCCGGGCTTCATGGAG 62.764 68.421 33.28 0.00 34.72 3.86
550 1449 4.002797 GCTTCATGGAGCCCGTTT 57.997 55.556 15.77 0.00 36.66 3.60
551 1450 2.267045 GCTTCATGGAGCCCGTTTT 58.733 52.632 15.77 0.00 36.66 2.43
552 1451 1.459450 GCTTCATGGAGCCCGTTTTA 58.541 50.000 15.77 0.00 36.66 1.52
553 1452 2.024414 GCTTCATGGAGCCCGTTTTAT 58.976 47.619 15.77 0.00 36.66 1.40
554 1453 2.033424 GCTTCATGGAGCCCGTTTTATC 59.967 50.000 15.77 0.00 36.66 1.75
555 1454 3.278574 CTTCATGGAGCCCGTTTTATCA 58.721 45.455 0.00 0.00 0.00 2.15
556 1455 3.358111 TCATGGAGCCCGTTTTATCAA 57.642 42.857 0.00 0.00 0.00 2.57
557 1456 3.691575 TCATGGAGCCCGTTTTATCAAA 58.308 40.909 0.00 0.00 0.00 2.69
558 1457 4.082845 TCATGGAGCCCGTTTTATCAAAA 58.917 39.130 0.00 0.00 0.00 2.44
559 1458 4.524714 TCATGGAGCCCGTTTTATCAAAAA 59.475 37.500 0.00 0.00 32.15 1.94
669 1568 8.958043 GTTTCATCAGGTAATTCGATTATTTGC 58.042 33.333 0.00 0.00 0.00 3.68
670 1569 7.800155 TCATCAGGTAATTCGATTATTTGCA 57.200 32.000 0.00 0.00 0.00 4.08
671 1570 8.394971 TCATCAGGTAATTCGATTATTTGCAT 57.605 30.769 0.00 0.00 0.00 3.96
672 1571 8.291740 TCATCAGGTAATTCGATTATTTGCATG 58.708 33.333 0.00 0.00 0.00 4.06
673 1572 6.437928 TCAGGTAATTCGATTATTTGCATGC 58.562 36.000 11.82 11.82 0.00 4.06
674 1573 6.262944 TCAGGTAATTCGATTATTTGCATGCT 59.737 34.615 20.33 0.40 0.00 3.79
675 1574 7.443879 TCAGGTAATTCGATTATTTGCATGCTA 59.556 33.333 20.33 8.83 0.00 3.49
676 1575 7.535258 CAGGTAATTCGATTATTTGCATGCTAC 59.465 37.037 20.33 7.72 0.00 3.58
677 1576 7.228507 AGGTAATTCGATTATTTGCATGCTACA 59.771 33.333 20.33 2.63 0.00 2.74
678 1577 7.323656 GGTAATTCGATTATTTGCATGCTACAC 59.676 37.037 20.33 3.30 0.00 2.90
679 1578 5.809719 TTCGATTATTTGCATGCTACACA 57.190 34.783 20.33 0.25 0.00 3.72
680 1579 5.809719 TCGATTATTTGCATGCTACACAA 57.190 34.783 20.33 6.98 0.00 3.33
681 1580 6.188400 TCGATTATTTGCATGCTACACAAA 57.812 33.333 20.33 10.86 37.66 2.83
682 1581 6.616017 TCGATTATTTGCATGCTACACAAAA 58.384 32.000 20.33 10.10 36.90 2.44
683 1582 7.087007 TCGATTATTTGCATGCTACACAAAAA 58.913 30.769 20.33 9.35 36.90 1.94
705 1604 7.744087 AAAAGAAAATATCTGGCCCAAAAAC 57.256 32.000 0.00 0.00 38.79 2.43
706 1605 6.432403 AAGAAAATATCTGGCCCAAAAACA 57.568 33.333 0.00 0.00 38.79 2.83
707 1606 6.432403 AGAAAATATCTGGCCCAAAAACAA 57.568 33.333 0.00 0.00 36.88 2.83
708 1607 6.230472 AGAAAATATCTGGCCCAAAAACAAC 58.770 36.000 0.00 0.00 36.88 3.32
709 1608 5.559148 AAATATCTGGCCCAAAAACAACA 57.441 34.783 0.00 0.00 0.00 3.33
710 1609 5.559148 AATATCTGGCCCAAAAACAACAA 57.441 34.783 0.00 0.00 0.00 2.83
711 1610 3.922171 ATCTGGCCCAAAAACAACAAA 57.078 38.095 0.00 0.00 0.00 2.83
712 1611 3.258971 TCTGGCCCAAAAACAACAAAG 57.741 42.857 0.00 0.00 0.00 2.77
713 1612 2.834549 TCTGGCCCAAAAACAACAAAGA 59.165 40.909 0.00 0.00 0.00 2.52
714 1613 3.454082 TCTGGCCCAAAAACAACAAAGAT 59.546 39.130 0.00 0.00 0.00 2.40
715 1614 4.651503 TCTGGCCCAAAAACAACAAAGATA 59.348 37.500 0.00 0.00 0.00 1.98
716 1615 5.129485 TCTGGCCCAAAAACAACAAAGATAA 59.871 36.000 0.00 0.00 0.00 1.75
717 1616 5.745227 TGGCCCAAAAACAACAAAGATAAA 58.255 33.333 0.00 0.00 0.00 1.40
718 1617 5.819901 TGGCCCAAAAACAACAAAGATAAAG 59.180 36.000 0.00 0.00 0.00 1.85
719 1618 5.277779 GGCCCAAAAACAACAAAGATAAAGC 60.278 40.000 0.00 0.00 0.00 3.51
720 1619 5.277779 GCCCAAAAACAACAAAGATAAAGCC 60.278 40.000 0.00 0.00 0.00 4.35
721 1620 5.238432 CCCAAAAACAACAAAGATAAAGCCC 59.762 40.000 0.00 0.00 0.00 5.19
722 1621 5.819901 CCAAAAACAACAAAGATAAAGCCCA 59.180 36.000 0.00 0.00 0.00 5.36
723 1622 6.486320 CCAAAAACAACAAAGATAAAGCCCAT 59.514 34.615 0.00 0.00 0.00 4.00
724 1623 7.013178 CCAAAAACAACAAAGATAAAGCCCATT 59.987 33.333 0.00 0.00 0.00 3.16
725 1624 8.404765 CAAAAACAACAAAGATAAAGCCCATTT 58.595 29.630 0.00 0.00 34.72 2.32
726 1625 8.518430 AAAACAACAAAGATAAAGCCCATTTT 57.482 26.923 0.00 0.00 32.01 1.82
727 1626 9.620259 AAAACAACAAAGATAAAGCCCATTTTA 57.380 25.926 0.00 0.00 32.01 1.52
728 1627 9.620259 AAACAACAAAGATAAAGCCCATTTTAA 57.380 25.926 0.00 0.00 32.01 1.52
729 1628 9.791801 AACAACAAAGATAAAGCCCATTTTAAT 57.208 25.926 0.00 0.00 32.01 1.40
730 1629 9.435688 ACAACAAAGATAAAGCCCATTTTAATC 57.564 29.630 0.00 0.00 32.01 1.75
731 1630 9.657419 CAACAAAGATAAAGCCCATTTTAATCT 57.343 29.630 0.00 0.00 32.01 2.40
732 1631 9.657419 AACAAAGATAAAGCCCATTTTAATCTG 57.343 29.630 0.00 0.00 32.01 2.90
733 1632 8.815912 ACAAAGATAAAGCCCATTTTAATCTGT 58.184 29.630 0.00 0.00 32.01 3.41
734 1633 9.090692 CAAAGATAAAGCCCATTTTAATCTGTG 57.909 33.333 0.00 0.00 32.01 3.66
735 1634 7.961326 AGATAAAGCCCATTTTAATCTGTGT 57.039 32.000 0.00 0.00 32.01 3.72
736 1635 9.474313 AAGATAAAGCCCATTTTAATCTGTGTA 57.526 29.630 0.00 0.00 32.01 2.90
737 1636 9.646522 AGATAAAGCCCATTTTAATCTGTGTAT 57.353 29.630 0.00 0.00 32.01 2.29
741 1640 9.791801 AAAGCCCATTTTAATCTGTGTATTTTT 57.208 25.926 0.00 0.00 0.00 1.94
862 1761 8.667987 TCAATGTGTGAAAATAGTATTTTCGC 57.332 30.769 34.62 34.62 44.60 4.70
863 1762 8.511321 TCAATGTGTGAAAATAGTATTTTCGCT 58.489 29.630 37.29 25.98 44.63 4.93
864 1763 8.577939 CAATGTGTGAAAATAGTATTTTCGCTG 58.422 33.333 37.29 29.54 44.63 5.18
865 1764 7.428282 TGTGTGAAAATAGTATTTTCGCTGA 57.572 32.000 37.29 28.27 44.63 4.26
866 1765 7.866729 TGTGTGAAAATAGTATTTTCGCTGAA 58.133 30.769 37.29 27.55 44.63 3.02
867 1766 8.346300 TGTGTGAAAATAGTATTTTCGCTGAAA 58.654 29.630 37.29 25.75 44.63 2.69
868 1767 9.176181 GTGTGAAAATAGTATTTTCGCTGAAAA 57.824 29.630 37.29 25.51 44.63 2.29
869 1768 9.393249 TGTGAAAATAGTATTTTCGCTGAAAAG 57.607 29.630 37.29 0.00 43.33 2.27
870 1769 9.607285 GTGAAAATAGTATTTTCGCTGAAAAGA 57.393 29.630 34.28 18.27 43.33 2.52
877 1776 8.655378 AGTATTTTCGCTGAAAAGAAATAACG 57.345 30.769 17.13 0.00 43.33 3.18
878 1777 8.500773 AGTATTTTCGCTGAAAAGAAATAACGA 58.499 29.630 17.13 0.00 43.33 3.85
879 1778 7.781763 ATTTTCGCTGAAAAGAAATAACGAG 57.218 32.000 17.13 0.00 43.33 4.18
880 1779 4.322101 TCGCTGAAAAGAAATAACGAGC 57.678 40.909 0.00 0.00 0.00 5.03
881 1780 3.994392 TCGCTGAAAAGAAATAACGAGCT 59.006 39.130 0.00 0.00 0.00 4.09
882 1781 5.165676 TCGCTGAAAAGAAATAACGAGCTA 58.834 37.500 0.00 0.00 0.00 3.32
883 1782 5.810587 TCGCTGAAAAGAAATAACGAGCTAT 59.189 36.000 0.00 0.00 0.00 2.97
884 1783 5.898606 CGCTGAAAAGAAATAACGAGCTATG 59.101 40.000 0.00 0.00 0.00 2.23
885 1784 6.455646 CGCTGAAAAGAAATAACGAGCTATGT 60.456 38.462 0.00 0.00 0.00 2.29
886 1785 6.684555 GCTGAAAAGAAATAACGAGCTATGTG 59.315 38.462 0.00 0.00 0.00 3.21
887 1786 7.072177 TGAAAAGAAATAACGAGCTATGTGG 57.928 36.000 0.00 0.00 0.00 4.17
888 1787 6.876789 TGAAAAGAAATAACGAGCTATGTGGA 59.123 34.615 0.00 0.00 0.00 4.02
889 1788 6.910536 AAAGAAATAACGAGCTATGTGGAG 57.089 37.500 0.00 0.00 0.00 3.86
890 1789 4.372656 AGAAATAACGAGCTATGTGGAGC 58.627 43.478 0.00 0.00 43.19 4.70
896 1795 4.740235 GCTATGTGGAGCTCGGTC 57.260 61.111 7.83 1.06 39.50 4.79
897 1796 2.119886 GCTATGTGGAGCTCGGTCT 58.880 57.895 7.83 0.00 39.50 3.85
898 1797 0.031449 GCTATGTGGAGCTCGGTCTC 59.969 60.000 7.83 0.00 39.50 3.36
899 1798 1.686355 CTATGTGGAGCTCGGTCTCT 58.314 55.000 7.83 0.00 33.70 3.10
900 1799 1.336440 CTATGTGGAGCTCGGTCTCTG 59.664 57.143 7.83 0.00 33.70 3.35
901 1800 0.613292 ATGTGGAGCTCGGTCTCTGT 60.613 55.000 7.83 0.00 33.70 3.41
902 1801 0.037734 TGTGGAGCTCGGTCTCTGTA 59.962 55.000 7.83 0.00 33.70 2.74
903 1802 1.341089 TGTGGAGCTCGGTCTCTGTAT 60.341 52.381 7.83 0.00 33.70 2.29
904 1803 1.066303 GTGGAGCTCGGTCTCTGTATG 59.934 57.143 7.83 0.00 33.70 2.39
905 1804 0.031449 GGAGCTCGGTCTCTGTATGC 59.969 60.000 7.83 0.00 33.70 3.14
906 1805 1.028905 GAGCTCGGTCTCTGTATGCT 58.971 55.000 0.00 0.00 0.00 3.79
907 1806 1.407258 GAGCTCGGTCTCTGTATGCTT 59.593 52.381 0.00 0.00 0.00 3.91
908 1807 1.827969 AGCTCGGTCTCTGTATGCTTT 59.172 47.619 0.00 0.00 0.00 3.51
909 1808 2.234908 AGCTCGGTCTCTGTATGCTTTT 59.765 45.455 0.00 0.00 0.00 2.27
910 1809 3.003480 GCTCGGTCTCTGTATGCTTTTT 58.997 45.455 0.00 0.00 0.00 1.94
911 1810 3.062774 GCTCGGTCTCTGTATGCTTTTTC 59.937 47.826 0.00 0.00 0.00 2.29
912 1811 3.250744 TCGGTCTCTGTATGCTTTTTCG 58.749 45.455 0.00 0.00 0.00 3.46
913 1812 3.057104 TCGGTCTCTGTATGCTTTTTCGA 60.057 43.478 0.00 0.00 0.00 3.71
914 1813 3.304559 CGGTCTCTGTATGCTTTTTCGAG 59.695 47.826 0.00 0.00 0.00 4.04
915 1814 3.062774 GGTCTCTGTATGCTTTTTCGAGC 59.937 47.826 0.00 0.00 43.00 5.03
1027 1926 3.058777 GCGAACGATTTGGTTGGTTAAGA 60.059 43.478 0.00 0.00 0.00 2.10
1035 1934 5.828299 TTTGGTTGGTTAAGAAGACACAG 57.172 39.130 0.00 0.00 0.00 3.66
1036 1935 3.211045 TGGTTGGTTAAGAAGACACAGC 58.789 45.455 0.00 0.00 0.00 4.40
1080 1979 7.067496 AGTGGAAGAGAGTCTTTATTTGTCA 57.933 36.000 0.00 0.00 36.73 3.58
1233 2132 1.090052 GCACGGGCATTCCACTAGTC 61.090 60.000 3.77 0.00 40.72 2.59
1285 2184 7.184800 TCAAATCGTATTCCAATATTCCGTG 57.815 36.000 0.00 0.00 0.00 4.94
1286 2185 6.203915 TCAAATCGTATTCCAATATTCCGTGG 59.796 38.462 0.00 0.00 36.13 4.94
1290 2189 5.011227 TCGTATTCCAATATTCCGTGGATGA 59.989 40.000 0.00 0.00 43.42 2.92
1304 2203 2.932614 GTGGATGAATCACGAGTTCCTG 59.067 50.000 2.06 0.00 0.00 3.86
1305 2204 2.093500 TGGATGAATCACGAGTTCCTGG 60.093 50.000 2.06 0.00 0.00 4.45
1359 2258 0.965866 CTCCCTGCGTCTGTCCAGTA 60.966 60.000 0.00 0.00 0.00 2.74
1380 2279 8.759641 CCAGTATGACTTTATTTGATCGAGAAG 58.240 37.037 0.00 0.00 39.69 2.85
1381 2280 9.521503 CAGTATGACTTTATTTGATCGAGAAGA 57.478 33.333 8.83 0.00 39.69 2.87
1382 2281 9.743057 AGTATGACTTTATTTGATCGAGAAGAG 57.257 33.333 8.83 0.00 0.00 2.85
1383 2282 9.737427 GTATGACTTTATTTGATCGAGAAGAGA 57.263 33.333 8.83 0.00 0.00 3.10
1386 2285 8.523658 TGACTTTATTTGATCGAGAAGAGAAGA 58.476 33.333 8.83 0.00 0.00 2.87
1387 2286 9.360093 GACTTTATTTGATCGAGAAGAGAAGAA 57.640 33.333 8.83 0.00 0.00 2.52
1388 2287 9.712305 ACTTTATTTGATCGAGAAGAGAAGAAA 57.288 29.630 8.83 0.00 0.00 2.52
1548 2455 0.877071 TCGTCGTCTACTTCGCCTTT 59.123 50.000 0.00 0.00 0.00 3.11
2013 3004 4.172512 CCAGCAGCAGCCGGAGAT 62.173 66.667 5.05 0.00 40.99 2.75
2132 3123 3.109592 TTGGGGTCGCGTGGTCTTT 62.110 57.895 5.77 0.00 0.00 2.52
2198 3237 5.160607 TCTCTTGGTAGTACAATGGTTGG 57.839 43.478 2.06 0.00 34.12 3.77
2201 3240 6.012858 TCTCTTGGTAGTACAATGGTTGGATT 60.013 38.462 2.06 0.00 34.12 3.01
2202 3241 7.181305 TCTCTTGGTAGTACAATGGTTGGATTA 59.819 37.037 2.06 0.00 34.12 1.75
2203 3242 7.867921 TCTTGGTAGTACAATGGTTGGATTAT 58.132 34.615 2.06 0.00 34.12 1.28
2379 3580 5.634859 CGTACGTAACCACCTAACAAATCTT 59.365 40.000 7.22 0.00 0.00 2.40
2445 3687 3.194861 TCGAGATGGGTTTTGCTATTCG 58.805 45.455 0.00 0.00 0.00 3.34
2450 3692 3.019933 TGGGTTTTGCTATTCGTTTGC 57.980 42.857 0.00 0.00 0.00 3.68
2477 3719 1.620822 AACTCCATGGTCAACCTTGC 58.379 50.000 12.58 0.00 39.19 4.01
2488 3734 3.550275 GGTCAACCTTGCGTTTCTTTTTC 59.450 43.478 0.00 0.00 29.93 2.29
2492 3738 2.361119 ACCTTGCGTTTCTTTTTCCTCC 59.639 45.455 0.00 0.00 0.00 4.30
2493 3739 2.360801 CCTTGCGTTTCTTTTTCCTCCA 59.639 45.455 0.00 0.00 0.00 3.86
2497 3830 5.017294 TGCGTTTCTTTTTCCTCCATTTT 57.983 34.783 0.00 0.00 0.00 1.82
2501 3834 6.700081 GCGTTTCTTTTTCCTCCATTTTTAGT 59.300 34.615 0.00 0.00 0.00 2.24
2507 3840 8.445588 TCTTTTTCCTCCATTTTTAGTAGGTCT 58.554 33.333 0.00 0.00 0.00 3.85
2544 3877 9.681062 TTTTTAGAATACTACTCCCTCCAATTG 57.319 33.333 0.00 0.00 0.00 2.32
2551 3884 5.501156 ACTACTCCCTCCAATTGAATGAAC 58.499 41.667 7.12 0.00 0.00 3.18
2582 3915 7.472186 CGCACACGTATTGTAAAAACTTACTAC 59.528 37.037 0.00 0.00 35.67 2.73
2584 3922 9.787626 CACACGTATTGTAAAAACTTACTACAG 57.212 33.333 0.00 0.00 35.67 2.74
2660 3999 5.501715 TCGAGTACGAATTCAACGGTATAC 58.498 41.667 6.22 0.00 45.74 1.47
2701 4043 7.418378 ACCTACCCTAAATTTGATTGATCCAA 58.582 34.615 0.00 0.00 0.00 3.53
2741 4161 0.885196 TTAAAATGTGTGCGGGCCTC 59.115 50.000 0.84 0.00 0.00 4.70
2757 4177 2.621407 GGCCTCATTCATTGGAGTGGAA 60.621 50.000 0.00 0.00 32.09 3.53
2773 4193 2.790433 TGGAAGGAGCACCACATTTAC 58.210 47.619 2.07 0.00 38.94 2.01
2782 4202 3.765511 AGCACCACATTTACAGCAATGAT 59.234 39.130 1.81 0.00 37.55 2.45
2905 4331 4.292186 TGAGAGCTAGGTTTGCAGAAAT 57.708 40.909 0.00 0.00 0.00 2.17
2911 4337 2.270352 AGGTTTGCAGAAATCACCGA 57.730 45.000 0.00 0.00 0.00 4.69
2912 4338 1.880027 AGGTTTGCAGAAATCACCGAC 59.120 47.619 0.00 0.00 0.00 4.79
2969 4395 6.151144 GGGTAATCTCTTTGCATAAACACTGT 59.849 38.462 0.00 0.00 0.00 3.55
2976 4402 1.950216 TGCATAAACACTGTTTGGCGA 59.050 42.857 16.09 8.48 0.00 5.54
2980 4406 4.606961 CATAAACACTGTTTGGCGAGTTT 58.393 39.130 16.09 0.00 34.11 2.66
2995 4421 2.688958 CGAGTTTGGGTGGGTTTTTGTA 59.311 45.455 0.00 0.00 0.00 2.41
3002 4428 3.838903 TGGGTGGGTTTTTGTAACAAACT 59.161 39.130 0.00 0.00 34.96 2.66
3030 4456 5.362430 AGACCAATGGTTTCTGCAAACTTAA 59.638 36.000 6.30 0.00 41.61 1.85
3031 4457 5.356426 ACCAATGGTTTCTGCAAACTTAAC 58.644 37.500 0.00 0.00 41.61 2.01
3032 4458 4.749598 CCAATGGTTTCTGCAAACTTAACC 59.250 41.667 1.52 5.06 41.61 2.85
3035 4461 5.195001 TGGTTTCTGCAAACTTAACCATC 57.805 39.130 11.50 0.00 42.29 3.51
3036 4462 4.646945 TGGTTTCTGCAAACTTAACCATCA 59.353 37.500 11.50 0.00 42.29 3.07
3037 4463 5.127845 TGGTTTCTGCAAACTTAACCATCAA 59.872 36.000 11.50 0.00 42.29 2.57
3038 4464 6.183360 TGGTTTCTGCAAACTTAACCATCAAT 60.183 34.615 11.50 0.00 42.29 2.57
3040 4466 6.403866 TTCTGCAAACTTAACCATCAATGT 57.596 33.333 0.00 0.00 0.00 2.71
3053 4479 3.429272 CCATCAATGTGGTGGTATTGTGC 60.429 47.826 0.00 0.00 43.61 4.57
3054 4480 2.868899 TCAATGTGGTGGTATTGTGCA 58.131 42.857 0.00 0.00 36.09 4.57
3062 4488 5.048364 TGTGGTGGTATTGTGCAATTAACTC 60.048 40.000 2.56 0.00 32.50 3.01
3065 4491 6.887002 TGGTGGTATTGTGCAATTAACTCATA 59.113 34.615 2.56 0.00 32.50 2.15
3066 4492 7.559533 TGGTGGTATTGTGCAATTAACTCATAT 59.440 33.333 2.56 0.00 32.50 1.78
3067 4493 8.413229 GGTGGTATTGTGCAATTAACTCATATT 58.587 33.333 2.56 0.00 32.50 1.28
3068 4494 9.450807 GTGGTATTGTGCAATTAACTCATATTC 57.549 33.333 2.56 0.00 32.50 1.75
3069 4495 8.629158 TGGTATTGTGCAATTAACTCATATTCC 58.371 33.333 2.56 0.00 32.50 3.01
3070 4496 8.082242 GGTATTGTGCAATTAACTCATATTCCC 58.918 37.037 2.56 0.00 32.50 3.97
3071 4497 7.902920 ATTGTGCAATTAACTCATATTCCCT 57.097 32.000 0.00 0.00 0.00 4.20
3072 4498 6.942532 TGTGCAATTAACTCATATTCCCTC 57.057 37.500 0.00 0.00 0.00 4.30
3073 4499 5.827797 TGTGCAATTAACTCATATTCCCTCC 59.172 40.000 0.00 0.00 0.00 4.30
3074 4500 5.049405 GTGCAATTAACTCATATTCCCTCCG 60.049 44.000 0.00 0.00 0.00 4.63
3075 4501 4.455877 GCAATTAACTCATATTCCCTCCGG 59.544 45.833 0.00 0.00 0.00 5.14
3076 4502 5.621193 CAATTAACTCATATTCCCTCCGGT 58.379 41.667 0.00 0.00 0.00 5.28
3077 4503 4.950205 TTAACTCATATTCCCTCCGGTC 57.050 45.455 0.00 0.00 0.00 4.79
3078 4504 2.777459 ACTCATATTCCCTCCGGTCT 57.223 50.000 0.00 0.00 0.00 3.85
3079 4505 3.047695 ACTCATATTCCCTCCGGTCTT 57.952 47.619 0.00 0.00 0.00 3.01
3080 4506 3.385115 ACTCATATTCCCTCCGGTCTTT 58.615 45.455 0.00 0.00 0.00 2.52
3081 4507 3.780850 ACTCATATTCCCTCCGGTCTTTT 59.219 43.478 0.00 0.00 0.00 2.27
3082 4508 4.227527 ACTCATATTCCCTCCGGTCTTTTT 59.772 41.667 0.00 0.00 0.00 1.94
3106 4532 7.534085 TTAGTCTGCATATAAGTTTTGTCCG 57.466 36.000 0.00 0.00 0.00 4.79
3107 4533 5.730550 AGTCTGCATATAAGTTTTGTCCGA 58.269 37.500 0.00 0.00 0.00 4.55
3108 4534 6.170506 AGTCTGCATATAAGTTTTGTCCGAA 58.829 36.000 0.00 0.00 0.00 4.30
3109 4535 6.313905 AGTCTGCATATAAGTTTTGTCCGAAG 59.686 38.462 0.00 0.00 0.00 3.79
3110 4536 6.092259 GTCTGCATATAAGTTTTGTCCGAAGT 59.908 38.462 0.00 0.00 0.00 3.01
3111 4537 6.312918 TCTGCATATAAGTTTTGTCCGAAGTC 59.687 38.462 0.00 0.00 0.00 3.01
3112 4538 5.935206 TGCATATAAGTTTTGTCCGAAGTCA 59.065 36.000 0.00 0.00 0.00 3.41
3113 4539 6.428465 TGCATATAAGTTTTGTCCGAAGTCAA 59.572 34.615 0.00 0.00 0.00 3.18
3114 4540 7.041030 TGCATATAAGTTTTGTCCGAAGTCAAA 60.041 33.333 0.00 0.00 32.75 2.69
3115 4541 7.481798 GCATATAAGTTTTGTCCGAAGTCAAAG 59.518 37.037 0.00 0.00 35.47 2.77
3116 4542 3.692791 AGTTTTGTCCGAAGTCAAAGC 57.307 42.857 0.00 0.00 35.47 3.51
3117 4543 3.013921 AGTTTTGTCCGAAGTCAAAGCA 58.986 40.909 0.00 0.00 37.28 3.91
3118 4544 3.632145 AGTTTTGTCCGAAGTCAAAGCAT 59.368 39.130 0.00 0.00 37.28 3.79
3119 4545 3.896648 TTTGTCCGAAGTCAAAGCATC 57.103 42.857 0.00 0.00 0.00 3.91
3120 4546 2.839486 TGTCCGAAGTCAAAGCATCT 57.161 45.000 0.00 0.00 0.00 2.90
3121 4547 2.688507 TGTCCGAAGTCAAAGCATCTC 58.311 47.619 0.00 0.00 0.00 2.75
3122 4548 2.300152 TGTCCGAAGTCAAAGCATCTCT 59.700 45.455 0.00 0.00 0.00 3.10
3123 4549 3.509967 TGTCCGAAGTCAAAGCATCTCTA 59.490 43.478 0.00 0.00 0.00 2.43
3124 4550 3.860536 GTCCGAAGTCAAAGCATCTCTAC 59.139 47.826 0.00 0.00 0.00 2.59
3125 4551 3.764434 TCCGAAGTCAAAGCATCTCTACT 59.236 43.478 0.00 0.00 0.00 2.57
3126 4552 4.220821 TCCGAAGTCAAAGCATCTCTACTT 59.779 41.667 0.00 0.00 0.00 2.24
3127 4553 4.932200 CCGAAGTCAAAGCATCTCTACTTT 59.068 41.667 0.00 0.00 36.56 2.66
3135 4561 5.948992 AAGCATCTCTACTTTGACCAAAC 57.051 39.130 0.00 0.00 0.00 2.93
3136 4562 5.234466 AGCATCTCTACTTTGACCAAACT 57.766 39.130 0.00 0.00 0.00 2.66
3137 4563 5.625150 AGCATCTCTACTTTGACCAAACTT 58.375 37.500 0.00 0.00 0.00 2.66
3138 4564 6.769512 AGCATCTCTACTTTGACCAAACTTA 58.230 36.000 0.00 0.00 0.00 2.24
3139 4565 7.398024 AGCATCTCTACTTTGACCAAACTTAT 58.602 34.615 0.00 0.00 0.00 1.73
3140 4566 8.540388 AGCATCTCTACTTTGACCAAACTTATA 58.460 33.333 0.00 0.00 0.00 0.98
3141 4567 8.821894 GCATCTCTACTTTGACCAAACTTATAG 58.178 37.037 0.00 0.00 0.00 1.31
3167 4593 7.656707 AAAAACTATCAACATTCACAATGCC 57.343 32.000 0.00 0.00 42.69 4.40
3168 4594 5.981088 AACTATCAACATTCACAATGCCA 57.019 34.783 0.00 0.00 42.69 4.92
3169 4595 5.981088 ACTATCAACATTCACAATGCCAA 57.019 34.783 0.00 0.00 42.69 4.52
3170 4596 6.343716 ACTATCAACATTCACAATGCCAAA 57.656 33.333 0.00 0.00 42.69 3.28
3171 4597 6.938507 ACTATCAACATTCACAATGCCAAAT 58.061 32.000 0.00 0.00 42.69 2.32
3172 4598 7.037438 ACTATCAACATTCACAATGCCAAATC 58.963 34.615 0.00 0.00 42.69 2.17
3173 4599 5.211174 TCAACATTCACAATGCCAAATCA 57.789 34.783 0.00 0.00 42.69 2.57
3174 4600 5.608449 TCAACATTCACAATGCCAAATCAA 58.392 33.333 0.00 0.00 42.69 2.57
3175 4601 6.231951 TCAACATTCACAATGCCAAATCAAT 58.768 32.000 0.00 0.00 42.69 2.57
3176 4602 7.384477 TCAACATTCACAATGCCAAATCAATA 58.616 30.769 0.00 0.00 42.69 1.90
3177 4603 8.041919 TCAACATTCACAATGCCAAATCAATAT 58.958 29.630 0.00 0.00 42.69 1.28
3178 4604 8.670135 CAACATTCACAATGCCAAATCAATATT 58.330 29.630 0.00 0.00 42.69 1.28
3179 4605 9.887629 AACATTCACAATGCCAAATCAATATTA 57.112 25.926 0.00 0.00 42.69 0.98
3282 4708 9.797556 ATTTGGTCTAAGTTTACAAAGTTTGAC 57.202 29.630 22.23 19.67 45.15 3.18
3283 4709 8.570068 TTGGTCTAAGTTTACAAAGTTTGACT 57.430 30.769 22.23 12.01 45.19 3.41
3284 4710 8.570068 TGGTCTAAGTTTACAAAGTTTGACTT 57.430 30.769 22.23 20.45 45.19 3.01
3285 4711 8.455682 TGGTCTAAGTTTACAAAGTTTGACTTG 58.544 33.333 22.23 13.97 45.19 3.16
3286 4712 8.671028 GGTCTAAGTTTACAAAGTTTGACTTGA 58.329 33.333 22.23 15.56 45.19 3.02
3287 4713 9.486857 GTCTAAGTTTACAAAGTTTGACTTGAC 57.513 33.333 22.23 20.76 43.87 3.18
3288 4714 8.385111 TCTAAGTTTACAAAGTTTGACTTGACG 58.615 33.333 22.23 12.71 38.66 4.35
3289 4715 5.329493 AGTTTACAAAGTTTGACTTGACGC 58.671 37.500 22.23 4.19 38.66 5.19
3290 4716 4.948608 TTACAAAGTTTGACTTGACGCA 57.051 36.364 22.23 0.00 38.66 5.24
3291 4717 3.840890 ACAAAGTTTGACTTGACGCAA 57.159 38.095 22.23 0.00 38.66 4.85
3292 4718 4.167554 ACAAAGTTTGACTTGACGCAAA 57.832 36.364 22.23 0.00 38.66 3.68
3293 4719 4.743493 ACAAAGTTTGACTTGACGCAAAT 58.257 34.783 22.23 0.00 38.66 2.32
3294 4720 4.798387 ACAAAGTTTGACTTGACGCAAATC 59.202 37.500 22.23 0.00 38.66 2.17
3295 4721 3.626028 AGTTTGACTTGACGCAAATCC 57.374 42.857 0.00 0.00 36.51 3.01
3296 4722 2.948979 AGTTTGACTTGACGCAAATCCA 59.051 40.909 0.00 0.00 36.51 3.41
3297 4723 3.380004 AGTTTGACTTGACGCAAATCCAA 59.620 39.130 0.00 0.00 36.51 3.53
3298 4724 4.037923 AGTTTGACTTGACGCAAATCCAAT 59.962 37.500 0.00 0.00 36.51 3.16
3299 4725 5.240623 AGTTTGACTTGACGCAAATCCAATA 59.759 36.000 0.00 0.00 36.51 1.90
3300 4726 4.678509 TGACTTGACGCAAATCCAATAC 57.321 40.909 0.05 0.00 0.00 1.89
3301 4727 3.124466 TGACTTGACGCAAATCCAATACG 59.876 43.478 0.05 0.00 0.00 3.06
3302 4728 2.159572 ACTTGACGCAAATCCAATACGC 60.160 45.455 0.00 0.00 0.00 4.42
3304 4730 4.588084 CGCAAATCCAATACGCGG 57.412 55.556 12.47 0.00 42.13 6.46
3305 4731 2.010670 CGCAAATCCAATACGCGGA 58.989 52.632 12.47 0.00 42.13 5.54
3306 4732 0.042188 CGCAAATCCAATACGCGGAG 60.042 55.000 12.47 0.00 42.13 4.63
3307 4733 1.014352 GCAAATCCAATACGCGGAGT 58.986 50.000 12.47 0.00 35.56 3.85
3308 4734 2.206750 GCAAATCCAATACGCGGAGTA 58.793 47.619 12.47 0.00 40.03 2.59
3309 4735 2.610374 GCAAATCCAATACGCGGAGTAA 59.390 45.455 12.47 0.00 39.04 2.24
3310 4736 3.064271 GCAAATCCAATACGCGGAGTAAA 59.936 43.478 12.47 0.00 39.04 2.01
3311 4737 4.437659 GCAAATCCAATACGCGGAGTAAAA 60.438 41.667 12.47 0.00 39.04 1.52
3312 4738 5.632959 CAAATCCAATACGCGGAGTAAAAA 58.367 37.500 12.47 0.00 39.04 1.94
3313 4739 5.479716 AATCCAATACGCGGAGTAAAAAG 57.520 39.130 12.47 0.00 39.04 2.27
3314 4740 3.264104 TCCAATACGCGGAGTAAAAAGG 58.736 45.455 12.47 0.00 39.04 3.11
3315 4741 3.055963 TCCAATACGCGGAGTAAAAAGGA 60.056 43.478 12.47 0.00 39.04 3.36
3316 4742 3.875134 CCAATACGCGGAGTAAAAAGGAT 59.125 43.478 12.47 0.00 39.04 3.24
3317 4743 4.025145 CCAATACGCGGAGTAAAAAGGATC 60.025 45.833 12.47 0.00 39.04 3.36
3318 4744 1.636988 ACGCGGAGTAAAAAGGATCG 58.363 50.000 12.47 0.00 0.00 3.69
3319 4745 0.928229 CGCGGAGTAAAAAGGATCGG 59.072 55.000 0.00 0.00 0.00 4.18
3320 4746 1.470285 CGCGGAGTAAAAAGGATCGGA 60.470 52.381 0.00 0.00 0.00 4.55
3321 4747 2.202566 GCGGAGTAAAAAGGATCGGAG 58.797 52.381 0.00 0.00 0.00 4.63
3322 4748 2.822764 CGGAGTAAAAAGGATCGGAGG 58.177 52.381 0.00 0.00 0.00 4.30
3323 4749 2.429610 CGGAGTAAAAAGGATCGGAGGA 59.570 50.000 0.00 0.00 0.00 3.71
3324 4750 3.118884 CGGAGTAAAAAGGATCGGAGGAA 60.119 47.826 0.00 0.00 0.00 3.36
3325 4751 4.443621 GGAGTAAAAAGGATCGGAGGAAG 58.556 47.826 0.00 0.00 0.00 3.46
3326 4752 4.081031 GGAGTAAAAAGGATCGGAGGAAGT 60.081 45.833 0.00 0.00 0.00 3.01
3327 4753 5.128335 GGAGTAAAAAGGATCGGAGGAAGTA 59.872 44.000 0.00 0.00 0.00 2.24
3355 6217 4.651778 TGTTCACAAGAGGAAATGTAGGG 58.348 43.478 0.00 0.00 0.00 3.53
3364 6226 4.038883 AGAGGAAATGTAGGGTATACGTGC 59.961 45.833 0.00 0.00 0.00 5.34
3369 6231 1.689813 TGTAGGGTATACGTGCCATGG 59.310 52.381 7.63 7.63 0.00 3.66
3435 6308 9.646427 AACAAGTGTCACTAATTTCTATCTCTC 57.354 33.333 5.77 0.00 0.00 3.20
3439 6312 7.337184 AGTGTCACTAATTTCTATCTCTCGTGA 59.663 37.037 2.87 0.00 0.00 4.35
3753 6823 6.746364 GTGACCTTCTACGTGTTACTATCTTG 59.254 42.308 0.00 0.00 0.00 3.02
3763 6833 6.040247 CGTGTTACTATCTTGCAGGTGATTA 58.960 40.000 0.00 0.00 0.00 1.75
3764 6834 6.701841 CGTGTTACTATCTTGCAGGTGATTAT 59.298 38.462 0.00 0.00 0.00 1.28
3814 6885 5.240121 ACATTGCCTAATTTTTGAAGCCAG 58.760 37.500 0.00 0.00 0.00 4.85
3833 6911 7.552050 AGCCAGCTATTCTAATCATACTTCT 57.448 36.000 0.00 0.00 0.00 2.85
3914 6992 0.914644 AGTATGACCTGCATGCTGGT 59.085 50.000 39.82 39.82 46.40 4.00
3936 7014 5.493735 GTGTACTTAGTACCGCGTAAGTAG 58.506 45.833 20.81 8.12 40.65 2.57
3989 7068 6.708054 ACTGTTCCTTTCTTTATGTGTCTCTG 59.292 38.462 0.00 0.00 0.00 3.35
4015 7096 9.085250 GTTTTTGGACAAATGCAATTGATTTTT 57.915 25.926 21.10 5.79 36.10 1.94
4279 7361 2.298729 CCGCTCTTTCCAAATTTCCCAA 59.701 45.455 0.00 0.00 0.00 4.12
4383 7465 1.004277 GTCAACCATGGCCCAGTTCTA 59.996 52.381 13.04 0.00 0.00 2.10
4828 7918 5.055265 TCACCTGAGACACCCAAAAATTA 57.945 39.130 0.00 0.00 0.00 1.40
4837 7927 6.314917 AGACACCCAAAAATTATTGAGGAGT 58.685 36.000 0.00 0.00 32.01 3.85
4872 7962 5.273170 CGAGCAATTTCTTCTTTGTGACAA 58.727 37.500 0.00 0.00 0.00 3.18
5037 8127 0.251787 AATCCCACCCAAGGCTTGAC 60.252 55.000 28.18 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 7.147976 TGTAGAACCATCTATGTGATCAATCG 58.852 38.462 0.00 0.00 40.21 3.34
503 1402 0.874175 CGACGCCTCACTCACACAAA 60.874 55.000 0.00 0.00 0.00 2.83
504 1403 1.299850 CGACGCCTCACTCACACAA 60.300 57.895 0.00 0.00 0.00 3.33
505 1404 2.335011 CGACGCCTCACTCACACA 59.665 61.111 0.00 0.00 0.00 3.72
506 1405 3.106407 GCGACGCCTCACTCACAC 61.106 66.667 9.14 0.00 0.00 3.82
507 1406 3.558099 CTGCGACGCCTCACTCACA 62.558 63.158 18.69 0.00 0.00 3.58
508 1407 2.807045 CTGCGACGCCTCACTCAC 60.807 66.667 18.69 0.00 0.00 3.51
509 1408 2.982744 CTCTGCGACGCCTCACTCA 61.983 63.158 18.69 0.00 0.00 3.41
510 1409 2.202544 CTCTGCGACGCCTCACTC 60.203 66.667 18.69 0.00 0.00 3.51
511 1410 3.753434 CCTCTGCGACGCCTCACT 61.753 66.667 18.69 0.00 0.00 3.41
522 1421 4.496336 ATGAAGCCCGGCCTCTGC 62.496 66.667 5.55 0.00 0.00 4.26
523 1422 2.515523 CATGAAGCCCGGCCTCTG 60.516 66.667 5.55 0.00 0.00 3.35
524 1423 3.801997 CCATGAAGCCCGGCCTCT 61.802 66.667 5.55 0.00 0.00 3.69
525 1424 3.764160 CTCCATGAAGCCCGGCCTC 62.764 68.421 5.55 2.84 0.00 4.70
526 1425 3.801997 CTCCATGAAGCCCGGCCT 61.802 66.667 5.55 0.00 0.00 5.19
533 1432 1.459450 TAAAACGGGCTCCATGAAGC 58.541 50.000 0.00 0.00 41.73 3.86
534 1433 3.278574 TGATAAAACGGGCTCCATGAAG 58.721 45.455 0.00 0.00 0.00 3.02
535 1434 3.358111 TGATAAAACGGGCTCCATGAA 57.642 42.857 0.00 0.00 0.00 2.57
536 1435 3.358111 TTGATAAAACGGGCTCCATGA 57.642 42.857 0.00 0.00 0.00 3.07
537 1436 4.448537 TTTTGATAAAACGGGCTCCATG 57.551 40.909 0.00 0.00 0.00 3.66
643 1542 8.958043 GCAAATAATCGAATTACCTGATGAAAC 58.042 33.333 0.00 0.00 0.00 2.78
644 1543 8.681806 TGCAAATAATCGAATTACCTGATGAAA 58.318 29.630 0.00 0.00 0.00 2.69
645 1544 8.219546 TGCAAATAATCGAATTACCTGATGAA 57.780 30.769 0.00 0.00 0.00 2.57
646 1545 7.800155 TGCAAATAATCGAATTACCTGATGA 57.200 32.000 0.00 0.00 0.00 2.92
647 1546 7.061441 GCATGCAAATAATCGAATTACCTGATG 59.939 37.037 14.21 0.00 0.00 3.07
648 1547 7.040201 AGCATGCAAATAATCGAATTACCTGAT 60.040 33.333 21.98 0.00 0.00 2.90
649 1548 6.262944 AGCATGCAAATAATCGAATTACCTGA 59.737 34.615 21.98 0.00 0.00 3.86
650 1549 6.441274 AGCATGCAAATAATCGAATTACCTG 58.559 36.000 21.98 0.00 0.00 4.00
651 1550 6.639632 AGCATGCAAATAATCGAATTACCT 57.360 33.333 21.98 0.00 0.00 3.08
652 1551 7.323656 GTGTAGCATGCAAATAATCGAATTACC 59.676 37.037 21.98 0.07 27.52 2.85
653 1552 7.855409 TGTGTAGCATGCAAATAATCGAATTAC 59.145 33.333 21.98 9.03 27.52 1.89
654 1553 7.924940 TGTGTAGCATGCAAATAATCGAATTA 58.075 30.769 21.98 0.00 27.52 1.40
655 1554 6.794374 TGTGTAGCATGCAAATAATCGAATT 58.206 32.000 21.98 0.00 27.52 2.17
656 1555 6.375945 TGTGTAGCATGCAAATAATCGAAT 57.624 33.333 21.98 0.00 27.52 3.34
657 1556 5.809719 TGTGTAGCATGCAAATAATCGAA 57.190 34.783 21.98 0.00 27.52 3.71
658 1557 5.809719 TTGTGTAGCATGCAAATAATCGA 57.190 34.783 21.98 0.00 27.52 3.59
659 1558 6.867799 TTTTGTGTAGCATGCAAATAATCG 57.132 33.333 21.98 0.00 33.00 3.34
680 1579 7.777440 TGTTTTTGGGCCAGATATTTTCTTTTT 59.223 29.630 6.23 0.00 29.93 1.94
681 1580 7.286313 TGTTTTTGGGCCAGATATTTTCTTTT 58.714 30.769 6.23 0.00 29.93 2.27
682 1581 6.836242 TGTTTTTGGGCCAGATATTTTCTTT 58.164 32.000 6.23 0.00 29.93 2.52
683 1582 6.432403 TGTTTTTGGGCCAGATATTTTCTT 57.568 33.333 6.23 0.00 29.93 2.52
684 1583 6.183361 TGTTGTTTTTGGGCCAGATATTTTCT 60.183 34.615 6.23 0.00 33.90 2.52
685 1584 5.994668 TGTTGTTTTTGGGCCAGATATTTTC 59.005 36.000 6.23 0.00 0.00 2.29
686 1585 5.934781 TGTTGTTTTTGGGCCAGATATTTT 58.065 33.333 6.23 0.00 0.00 1.82
687 1586 5.559148 TGTTGTTTTTGGGCCAGATATTT 57.441 34.783 6.23 0.00 0.00 1.40
688 1587 5.559148 TTGTTGTTTTTGGGCCAGATATT 57.441 34.783 6.23 0.00 0.00 1.28
689 1588 5.306678 TCTTTGTTGTTTTTGGGCCAGATAT 59.693 36.000 6.23 0.00 0.00 1.63
690 1589 4.651503 TCTTTGTTGTTTTTGGGCCAGATA 59.348 37.500 6.23 0.00 0.00 1.98
691 1590 3.454082 TCTTTGTTGTTTTTGGGCCAGAT 59.546 39.130 6.23 0.00 0.00 2.90
692 1591 2.834549 TCTTTGTTGTTTTTGGGCCAGA 59.165 40.909 6.23 0.00 0.00 3.86
693 1592 3.258971 TCTTTGTTGTTTTTGGGCCAG 57.741 42.857 6.23 0.00 0.00 4.85
694 1593 3.922171 ATCTTTGTTGTTTTTGGGCCA 57.078 38.095 0.00 0.00 0.00 5.36
695 1594 5.277779 GCTTTATCTTTGTTGTTTTTGGGCC 60.278 40.000 0.00 0.00 0.00 5.80
696 1595 5.277779 GGCTTTATCTTTGTTGTTTTTGGGC 60.278 40.000 0.00 0.00 0.00 5.36
697 1596 5.238432 GGGCTTTATCTTTGTTGTTTTTGGG 59.762 40.000 0.00 0.00 0.00 4.12
698 1597 5.819901 TGGGCTTTATCTTTGTTGTTTTTGG 59.180 36.000 0.00 0.00 0.00 3.28
699 1598 6.917217 TGGGCTTTATCTTTGTTGTTTTTG 57.083 33.333 0.00 0.00 0.00 2.44
700 1599 8.518430 AAATGGGCTTTATCTTTGTTGTTTTT 57.482 26.923 0.00 0.00 0.00 1.94
701 1600 8.518430 AAAATGGGCTTTATCTTTGTTGTTTT 57.482 26.923 0.00 0.00 0.00 2.43
702 1601 9.620259 TTAAAATGGGCTTTATCTTTGTTGTTT 57.380 25.926 0.00 0.00 0.00 2.83
703 1602 9.791801 ATTAAAATGGGCTTTATCTTTGTTGTT 57.208 25.926 0.00 0.00 0.00 2.83
704 1603 9.435688 GATTAAAATGGGCTTTATCTTTGTTGT 57.564 29.630 0.00 0.00 0.00 3.32
705 1604 9.657419 AGATTAAAATGGGCTTTATCTTTGTTG 57.343 29.630 0.00 0.00 0.00 3.33
706 1605 9.657419 CAGATTAAAATGGGCTTTATCTTTGTT 57.343 29.630 0.00 0.00 0.00 2.83
707 1606 8.815912 ACAGATTAAAATGGGCTTTATCTTTGT 58.184 29.630 0.00 0.00 0.00 2.83
708 1607 9.090692 CACAGATTAAAATGGGCTTTATCTTTG 57.909 33.333 0.00 0.00 0.00 2.77
709 1608 8.815912 ACACAGATTAAAATGGGCTTTATCTTT 58.184 29.630 0.00 0.00 0.00 2.52
710 1609 8.366359 ACACAGATTAAAATGGGCTTTATCTT 57.634 30.769 0.00 0.00 0.00 2.40
711 1610 7.961326 ACACAGATTAAAATGGGCTTTATCT 57.039 32.000 0.00 0.00 0.00 1.98
715 1614 9.791801 AAAAATACACAGATTAAAATGGGCTTT 57.208 25.926 0.00 0.00 0.00 3.51
836 1735 9.123709 GCGAAAATACTATTTTCACACATTGAA 57.876 29.630 24.42 0.00 42.83 2.69
837 1736 8.511321 AGCGAAAATACTATTTTCACACATTGA 58.489 29.630 24.42 0.00 38.07 2.57
838 1737 8.577939 CAGCGAAAATACTATTTTCACACATTG 58.422 33.333 24.42 13.07 38.07 2.82
839 1738 8.511321 TCAGCGAAAATACTATTTTCACACATT 58.489 29.630 24.42 5.86 38.07 2.71
840 1739 8.039603 TCAGCGAAAATACTATTTTCACACAT 57.960 30.769 24.42 9.69 38.07 3.21
841 1740 7.428282 TCAGCGAAAATACTATTTTCACACA 57.572 32.000 24.42 10.13 38.07 3.72
842 1741 8.722342 TTTCAGCGAAAATACTATTTTCACAC 57.278 30.769 24.42 16.60 38.07 3.82
843 1742 9.393249 CTTTTCAGCGAAAATACTATTTTCACA 57.607 29.630 24.42 9.58 40.14 3.58
844 1743 9.607285 TCTTTTCAGCGAAAATACTATTTTCAC 57.393 29.630 24.42 18.44 40.14 3.18
851 1750 9.749490 CGTTATTTCTTTTCAGCGAAAATACTA 57.251 29.630 13.98 5.27 40.14 1.82
852 1751 8.500773 TCGTTATTTCTTTTCAGCGAAAATACT 58.499 29.630 13.98 5.93 40.14 2.12
853 1752 8.649810 TCGTTATTTCTTTTCAGCGAAAATAC 57.350 30.769 13.98 3.51 40.14 1.89
854 1753 7.480542 GCTCGTTATTTCTTTTCAGCGAAAATA 59.519 33.333 13.98 7.13 40.14 1.40
855 1754 6.305638 GCTCGTTATTTCTTTTCAGCGAAAAT 59.694 34.615 13.98 5.41 40.14 1.82
856 1755 5.623673 GCTCGTTATTTCTTTTCAGCGAAAA 59.376 36.000 13.26 13.26 38.90 2.29
857 1756 5.049680 AGCTCGTTATTTCTTTTCAGCGAAA 60.050 36.000 0.00 0.55 34.08 3.46
858 1757 4.451096 AGCTCGTTATTTCTTTTCAGCGAA 59.549 37.500 0.00 0.00 0.00 4.70
859 1758 3.994392 AGCTCGTTATTTCTTTTCAGCGA 59.006 39.130 0.00 0.00 0.00 4.93
860 1759 4.327854 AGCTCGTTATTTCTTTTCAGCG 57.672 40.909 0.00 0.00 0.00 5.18
861 1760 6.684555 CACATAGCTCGTTATTTCTTTTCAGC 59.315 38.462 0.00 0.00 0.00 4.26
862 1761 7.064609 TCCACATAGCTCGTTATTTCTTTTCAG 59.935 37.037 0.00 0.00 0.00 3.02
863 1762 6.876789 TCCACATAGCTCGTTATTTCTTTTCA 59.123 34.615 0.00 0.00 0.00 2.69
864 1763 7.303634 TCCACATAGCTCGTTATTTCTTTTC 57.696 36.000 0.00 0.00 0.00 2.29
865 1764 6.183360 GCTCCACATAGCTCGTTATTTCTTTT 60.183 38.462 0.00 0.00 39.50 2.27
866 1765 5.294552 GCTCCACATAGCTCGTTATTTCTTT 59.705 40.000 0.00 0.00 39.50 2.52
867 1766 4.811557 GCTCCACATAGCTCGTTATTTCTT 59.188 41.667 0.00 0.00 39.50 2.52
868 1767 4.372656 GCTCCACATAGCTCGTTATTTCT 58.627 43.478 0.00 0.00 39.50 2.52
869 1768 4.717188 GCTCCACATAGCTCGTTATTTC 57.283 45.455 0.00 0.00 39.50 2.17
879 1778 0.031449 GAGACCGAGCTCCACATAGC 59.969 60.000 8.47 0.00 43.11 2.97
880 1779 1.336440 CAGAGACCGAGCTCCACATAG 59.664 57.143 8.47 0.00 35.49 2.23
881 1780 1.341089 ACAGAGACCGAGCTCCACATA 60.341 52.381 8.47 0.00 35.49 2.29
882 1781 0.613292 ACAGAGACCGAGCTCCACAT 60.613 55.000 8.47 0.00 35.49 3.21
883 1782 0.037734 TACAGAGACCGAGCTCCACA 59.962 55.000 8.47 0.00 35.49 4.17
884 1783 1.066303 CATACAGAGACCGAGCTCCAC 59.934 57.143 8.47 0.00 35.49 4.02
885 1784 1.393603 CATACAGAGACCGAGCTCCA 58.606 55.000 8.47 0.00 35.49 3.86
886 1785 0.031449 GCATACAGAGACCGAGCTCC 59.969 60.000 8.47 0.00 35.49 4.70
887 1786 1.028905 AGCATACAGAGACCGAGCTC 58.971 55.000 2.73 2.73 35.11 4.09
888 1787 1.479709 AAGCATACAGAGACCGAGCT 58.520 50.000 0.00 0.00 0.00 4.09
889 1788 2.301577 AAAGCATACAGAGACCGAGC 57.698 50.000 0.00 0.00 0.00 5.03
890 1789 3.304559 CGAAAAAGCATACAGAGACCGAG 59.695 47.826 0.00 0.00 0.00 4.63
891 1790 3.057104 TCGAAAAAGCATACAGAGACCGA 60.057 43.478 0.00 0.00 0.00 4.69
892 1791 3.250744 TCGAAAAAGCATACAGAGACCG 58.749 45.455 0.00 0.00 0.00 4.79
893 1792 3.062774 GCTCGAAAAAGCATACAGAGACC 59.937 47.826 0.00 0.00 42.05 3.85
894 1793 3.929610 AGCTCGAAAAAGCATACAGAGAC 59.070 43.478 0.00 0.00 45.00 3.36
895 1794 4.193826 AGCTCGAAAAAGCATACAGAGA 57.806 40.909 0.00 0.00 45.00 3.10
896 1795 4.935885 AAGCTCGAAAAAGCATACAGAG 57.064 40.909 0.00 0.00 45.00 3.35
897 1796 4.515191 ACAAAGCTCGAAAAAGCATACAGA 59.485 37.500 0.00 0.00 45.00 3.41
898 1797 4.614284 CACAAAGCTCGAAAAAGCATACAG 59.386 41.667 0.00 0.00 45.00 2.74
899 1798 4.036262 ACACAAAGCTCGAAAAAGCATACA 59.964 37.500 0.00 0.00 45.00 2.29
900 1799 4.537015 ACACAAAGCTCGAAAAAGCATAC 58.463 39.130 0.00 0.00 45.00 2.39
901 1800 4.829064 ACACAAAGCTCGAAAAAGCATA 57.171 36.364 0.00 0.00 45.00 3.14
902 1801 3.715628 ACACAAAGCTCGAAAAAGCAT 57.284 38.095 0.00 0.00 45.00 3.79
903 1802 3.242936 GGTACACAAAGCTCGAAAAAGCA 60.243 43.478 0.00 0.00 45.00 3.91
904 1803 3.003378 AGGTACACAAAGCTCGAAAAAGC 59.997 43.478 0.00 0.00 42.82 3.51
905 1804 4.813296 AGGTACACAAAGCTCGAAAAAG 57.187 40.909 0.00 0.00 0.00 2.27
906 1805 6.870971 ATAAGGTACACAAAGCTCGAAAAA 57.129 33.333 0.00 0.00 0.00 1.94
907 1806 7.966246 TTATAAGGTACACAAAGCTCGAAAA 57.034 32.000 0.00 0.00 0.00 2.29
908 1807 9.309516 CTATTATAAGGTACACAAAGCTCGAAA 57.690 33.333 0.00 0.00 0.00 3.46
909 1808 8.472413 ACTATTATAAGGTACACAAAGCTCGAA 58.528 33.333 0.00 0.00 0.00 3.71
910 1809 7.919091 CACTATTATAAGGTACACAAAGCTCGA 59.081 37.037 0.00 0.00 0.00 4.04
911 1810 7.169308 CCACTATTATAAGGTACACAAAGCTCG 59.831 40.741 0.00 0.00 0.00 5.03
912 1811 7.041984 GCCACTATTATAAGGTACACAAAGCTC 60.042 40.741 0.00 0.00 0.00 4.09
913 1812 6.766467 GCCACTATTATAAGGTACACAAAGCT 59.234 38.462 0.00 0.00 0.00 3.74
914 1813 6.540914 TGCCACTATTATAAGGTACACAAAGC 59.459 38.462 0.00 0.00 0.00 3.51
915 1814 7.012044 GGTGCCACTATTATAAGGTACACAAAG 59.988 40.741 17.89 0.00 38.32 2.77
983 1882 9.772973 TTCGCTAACTGGATATATGTTGTTAAT 57.227 29.630 0.00 0.00 0.00 1.40
986 1885 6.200286 CGTTCGCTAACTGGATATATGTTGTT 59.800 38.462 0.00 0.00 33.15 2.83
989 1888 6.080648 TCGTTCGCTAACTGGATATATGTT 57.919 37.500 0.00 0.00 33.15 2.71
1027 1926 0.522180 CTCGGTAGTCGCTGTGTCTT 59.478 55.000 0.00 0.00 39.05 3.01
1035 1934 2.669364 TGTTTTCTTCTCGGTAGTCGC 58.331 47.619 0.00 0.00 39.05 5.19
1036 1935 4.148348 CACTTGTTTTCTTCTCGGTAGTCG 59.852 45.833 0.00 0.00 40.90 4.18
1080 1979 5.479375 GGGCATCTGATTTCCATCATACATT 59.521 40.000 7.69 0.00 38.81 2.71
1233 2132 2.989166 GGTCCGGTCGTTTGTTAAGTAG 59.011 50.000 0.00 0.00 0.00 2.57
1265 2164 5.477607 TCCACGGAATATTGGAATACGAT 57.522 39.130 0.00 0.00 39.04 3.73
1283 2182 2.932614 CAGGAACTCGTGATTCATCCAC 59.067 50.000 6.13 0.00 34.60 4.02
1285 2184 2.555199 CCAGGAACTCGTGATTCATCC 58.445 52.381 1.04 0.00 34.60 3.51
1286 2185 1.936547 GCCAGGAACTCGTGATTCATC 59.063 52.381 0.00 0.00 34.60 2.92
1290 2189 0.537188 ATCGCCAGGAACTCGTGATT 59.463 50.000 0.00 0.00 43.86 2.57
1304 2203 2.554032 CCTCCATCATTTAACCATCGCC 59.446 50.000 0.00 0.00 0.00 5.54
1305 2204 3.476552 TCCTCCATCATTTAACCATCGC 58.523 45.455 0.00 0.00 0.00 4.58
1359 2258 9.311916 CTTCTCTTCTCGATCAAATAAAGTCAT 57.688 33.333 0.00 0.00 0.00 3.06
1380 2279 2.969628 TCATCTCGGCCTTTCTTCTC 57.030 50.000 0.00 0.00 0.00 2.87
1381 2280 3.323403 CCTATCATCTCGGCCTTTCTTCT 59.677 47.826 0.00 0.00 0.00 2.85
1382 2281 3.556004 CCCTATCATCTCGGCCTTTCTTC 60.556 52.174 0.00 0.00 0.00 2.87
1383 2282 2.370189 CCCTATCATCTCGGCCTTTCTT 59.630 50.000 0.00 0.00 0.00 2.52
1384 2283 1.974236 CCCTATCATCTCGGCCTTTCT 59.026 52.381 0.00 0.00 0.00 2.52
1386 2285 1.417890 CACCCTATCATCTCGGCCTTT 59.582 52.381 0.00 0.00 0.00 3.11
1387 2286 1.051812 CACCCTATCATCTCGGCCTT 58.948 55.000 0.00 0.00 0.00 4.35
1388 2287 0.833834 CCACCCTATCATCTCGGCCT 60.834 60.000 0.00 0.00 0.00 5.19
2169 3192 8.822805 ACCATTGTACTACCAAGAGAAAATCTA 58.177 33.333 0.00 0.00 37.23 1.98
2412 3616 4.430908 ACCCATCTCGAAACGAATCTAAC 58.569 43.478 0.00 0.00 34.74 2.34
2445 3687 2.682155 TGGAGTTTGGTTTGGCAAAC 57.318 45.000 30.15 30.15 40.47 2.93
2477 3719 9.394477 CTACTAAAAATGGAGGAAAAAGAAACG 57.606 33.333 0.00 0.00 0.00 3.60
2488 3734 6.809976 AGGTAGACCTACTAAAAATGGAGG 57.190 41.667 0.00 0.00 46.48 4.30
2524 3857 7.509546 TCATTCAATTGGAGGGAGTAGTATTC 58.490 38.462 5.42 0.00 0.00 1.75
2529 3862 5.500234 TGTTCATTCAATTGGAGGGAGTAG 58.500 41.667 5.42 0.00 0.00 2.57
2532 3865 3.698040 CCTGTTCATTCAATTGGAGGGAG 59.302 47.826 5.42 0.00 0.00 4.30
2534 3867 3.445096 GTCCTGTTCATTCAATTGGAGGG 59.555 47.826 5.42 0.00 0.00 4.30
2538 3871 2.228582 TGCGTCCTGTTCATTCAATTGG 59.771 45.455 5.42 0.00 0.00 3.16
2541 3874 2.226437 GTGTGCGTCCTGTTCATTCAAT 59.774 45.455 0.00 0.00 0.00 2.57
2543 3876 1.225855 GTGTGCGTCCTGTTCATTCA 58.774 50.000 0.00 0.00 0.00 2.57
2544 3877 0.163788 CGTGTGCGTCCTGTTCATTC 59.836 55.000 0.00 0.00 0.00 2.67
2741 4161 2.686915 GCTCCTTCCACTCCAATGAATG 59.313 50.000 0.00 0.00 0.00 2.67
2757 4177 1.073763 TGCTGTAAATGTGGTGCTCCT 59.926 47.619 6.34 0.00 34.23 3.69
2806 4226 8.291191 TGCCATGAAACAACTATAATTGATCA 57.709 30.769 0.04 5.46 35.24 2.92
2875 4301 2.540383 ACCTAGCTCTCAATGTGGTGA 58.460 47.619 0.00 0.00 0.00 4.02
2911 4337 5.394773 GTGTTTTTGTCACAAACCCATAGGT 60.395 40.000 1.28 0.00 40.81 3.08
2912 4338 5.047188 GTGTTTTTGTCACAAACCCATAGG 58.953 41.667 1.28 0.00 33.83 2.57
2969 4395 1.830408 CCCACCCAAACTCGCCAAA 60.830 57.895 0.00 0.00 0.00 3.28
2976 4402 3.838903 TGTTACAAAAACCCACCCAAACT 59.161 39.130 0.00 0.00 0.00 2.66
2980 4406 3.838903 AGTTTGTTACAAAAACCCACCCA 59.161 39.130 12.37 0.00 38.10 4.51
2995 4421 6.379988 AGAAACCATTGGTCTACAAGTTTGTT 59.620 34.615 9.22 0.00 43.48 2.83
3002 4428 3.826524 TGCAGAAACCATTGGTCTACAA 58.173 40.909 9.22 0.00 44.54 2.41
3031 4457 3.429272 GCACAATACCACCACATTGATGG 60.429 47.826 1.58 0.00 46.10 3.51
3032 4458 3.193056 TGCACAATACCACCACATTGATG 59.807 43.478 1.58 0.00 36.00 3.07
3033 4459 3.429492 TGCACAATACCACCACATTGAT 58.571 40.909 1.58 0.00 36.00 2.57
3034 4460 2.868899 TGCACAATACCACCACATTGA 58.131 42.857 1.58 0.00 36.00 2.57
3035 4461 3.657015 TTGCACAATACCACCACATTG 57.343 42.857 0.00 0.00 37.99 2.82
3036 4462 4.888326 AATTGCACAATACCACCACATT 57.112 36.364 0.00 0.00 0.00 2.71
3037 4463 5.480073 AGTTAATTGCACAATACCACCACAT 59.520 36.000 0.00 0.00 0.00 3.21
3038 4464 4.830046 AGTTAATTGCACAATACCACCACA 59.170 37.500 0.00 0.00 0.00 4.17
3040 4466 5.073428 TGAGTTAATTGCACAATACCACCA 58.927 37.500 0.00 0.00 0.00 4.17
3047 4473 7.014615 GGAGGGAATATGAGTTAATTGCACAAT 59.985 37.037 0.00 0.00 0.00 2.71
3080 4506 8.447833 CGGACAAAACTTATATGCAGACTAAAA 58.552 33.333 0.00 0.00 0.00 1.52
3081 4507 7.820386 TCGGACAAAACTTATATGCAGACTAAA 59.180 33.333 0.00 0.00 0.00 1.85
3082 4508 7.324935 TCGGACAAAACTTATATGCAGACTAA 58.675 34.615 0.00 0.00 0.00 2.24
3083 4509 6.869695 TCGGACAAAACTTATATGCAGACTA 58.130 36.000 0.00 0.00 0.00 2.59
3084 4510 5.730550 TCGGACAAAACTTATATGCAGACT 58.269 37.500 0.00 0.00 0.00 3.24
3085 4511 6.092259 ACTTCGGACAAAACTTATATGCAGAC 59.908 38.462 0.00 0.00 0.00 3.51
3086 4512 6.170506 ACTTCGGACAAAACTTATATGCAGA 58.829 36.000 0.00 0.00 0.00 4.26
3087 4513 6.092122 TGACTTCGGACAAAACTTATATGCAG 59.908 38.462 0.00 0.00 0.00 4.41
3088 4514 5.935206 TGACTTCGGACAAAACTTATATGCA 59.065 36.000 0.00 0.00 0.00 3.96
3089 4515 6.417191 TGACTTCGGACAAAACTTATATGC 57.583 37.500 0.00 0.00 0.00 3.14
3090 4516 7.481798 GCTTTGACTTCGGACAAAACTTATATG 59.518 37.037 0.00 0.00 38.59 1.78
3091 4517 7.174253 TGCTTTGACTTCGGACAAAACTTATAT 59.826 33.333 0.00 0.00 38.59 0.86
3092 4518 6.483974 TGCTTTGACTTCGGACAAAACTTATA 59.516 34.615 0.00 0.00 38.59 0.98
3093 4519 5.298276 TGCTTTGACTTCGGACAAAACTTAT 59.702 36.000 0.00 0.00 38.59 1.73
3094 4520 4.636648 TGCTTTGACTTCGGACAAAACTTA 59.363 37.500 0.00 0.00 38.59 2.24
3095 4521 3.442273 TGCTTTGACTTCGGACAAAACTT 59.558 39.130 0.00 0.00 38.59 2.66
3096 4522 3.013921 TGCTTTGACTTCGGACAAAACT 58.986 40.909 0.00 0.00 38.59 2.66
3097 4523 3.414549 TGCTTTGACTTCGGACAAAAC 57.585 42.857 0.00 0.00 38.59 2.43
3098 4524 3.882888 AGATGCTTTGACTTCGGACAAAA 59.117 39.130 0.00 0.00 38.59 2.44
3099 4525 3.476552 AGATGCTTTGACTTCGGACAAA 58.523 40.909 0.00 0.00 37.29 2.83
3100 4526 3.067106 GAGATGCTTTGACTTCGGACAA 58.933 45.455 0.00 0.00 0.00 3.18
3101 4527 2.300152 AGAGATGCTTTGACTTCGGACA 59.700 45.455 0.00 0.00 0.00 4.02
3102 4528 2.966050 AGAGATGCTTTGACTTCGGAC 58.034 47.619 0.00 0.00 0.00 4.79
3103 4529 3.764434 AGTAGAGATGCTTTGACTTCGGA 59.236 43.478 0.00 0.00 0.00 4.55
3104 4530 4.116747 AGTAGAGATGCTTTGACTTCGG 57.883 45.455 0.00 0.00 0.00 4.30
3112 4538 6.064717 AGTTTGGTCAAAGTAGAGATGCTTT 58.935 36.000 2.27 0.00 35.55 3.51
3113 4539 5.625150 AGTTTGGTCAAAGTAGAGATGCTT 58.375 37.500 2.27 0.00 32.58 3.91
3114 4540 5.234466 AGTTTGGTCAAAGTAGAGATGCT 57.766 39.130 2.27 0.00 32.58 3.79
3115 4541 5.948992 AAGTTTGGTCAAAGTAGAGATGC 57.051 39.130 4.44 0.00 33.87 3.91
3143 4569 7.215789 TGGCATTGTGAATGTTGATAGTTTTT 58.784 30.769 0.00 0.00 41.01 1.94
3144 4570 6.757237 TGGCATTGTGAATGTTGATAGTTTT 58.243 32.000 0.00 0.00 41.01 2.43
3145 4571 6.343716 TGGCATTGTGAATGTTGATAGTTT 57.656 33.333 0.00 0.00 41.01 2.66
3146 4572 5.981088 TGGCATTGTGAATGTTGATAGTT 57.019 34.783 0.00 0.00 41.01 2.24
3147 4573 5.981088 TTGGCATTGTGAATGTTGATAGT 57.019 34.783 0.00 0.00 41.01 2.12
3148 4574 7.036829 TGATTTGGCATTGTGAATGTTGATAG 58.963 34.615 0.00 0.00 41.01 2.08
3149 4575 6.932947 TGATTTGGCATTGTGAATGTTGATA 58.067 32.000 0.00 0.00 41.01 2.15
3150 4576 5.795972 TGATTTGGCATTGTGAATGTTGAT 58.204 33.333 0.00 0.00 41.01 2.57
3151 4577 5.211174 TGATTTGGCATTGTGAATGTTGA 57.789 34.783 0.00 0.00 41.01 3.18
3152 4578 5.926214 TTGATTTGGCATTGTGAATGTTG 57.074 34.783 0.00 0.00 41.01 3.33
3153 4579 8.795842 AATATTGATTTGGCATTGTGAATGTT 57.204 26.923 0.00 0.00 41.01 2.71
3256 4682 9.797556 GTCAAACTTTGTAAACTTAGACCAAAT 57.202 29.630 1.44 0.00 0.00 2.32
3257 4683 9.016438 AGTCAAACTTTGTAAACTTAGACCAAA 57.984 29.630 1.44 0.00 0.00 3.28
3258 4684 8.570068 AGTCAAACTTTGTAAACTTAGACCAA 57.430 30.769 1.44 0.00 0.00 3.67
3259 4685 8.455682 CAAGTCAAACTTTGTAAACTTAGACCA 58.544 33.333 6.72 0.00 36.03 4.02
3260 4686 8.671028 TCAAGTCAAACTTTGTAAACTTAGACC 58.329 33.333 6.72 0.00 36.03 3.85
3261 4687 9.486857 GTCAAGTCAAACTTTGTAAACTTAGAC 57.513 33.333 6.72 10.88 36.03 2.59
3262 4688 8.385111 CGTCAAGTCAAACTTTGTAAACTTAGA 58.615 33.333 6.72 5.43 36.03 2.10
3263 4689 7.163682 GCGTCAAGTCAAACTTTGTAAACTTAG 59.836 37.037 6.72 4.46 36.03 2.18
3264 4690 6.962678 GCGTCAAGTCAAACTTTGTAAACTTA 59.037 34.615 6.72 0.00 36.03 2.24
3265 4691 5.798434 GCGTCAAGTCAAACTTTGTAAACTT 59.202 36.000 1.44 2.13 36.03 2.66
3266 4692 5.106475 TGCGTCAAGTCAAACTTTGTAAACT 60.106 36.000 1.44 0.00 36.03 2.66
3267 4693 5.090083 TGCGTCAAGTCAAACTTTGTAAAC 58.910 37.500 1.44 0.00 36.03 2.01
3268 4694 5.298197 TGCGTCAAGTCAAACTTTGTAAA 57.702 34.783 1.44 0.00 36.03 2.01
3269 4695 4.948608 TGCGTCAAGTCAAACTTTGTAA 57.051 36.364 1.44 0.00 36.03 2.41
3270 4696 4.948608 TTGCGTCAAGTCAAACTTTGTA 57.051 36.364 1.44 0.00 36.03 2.41
3271 4697 3.840890 TTGCGTCAAGTCAAACTTTGT 57.159 38.095 1.44 0.00 36.03 2.83
3272 4698 4.207019 GGATTTGCGTCAAGTCAAACTTTG 59.793 41.667 13.80 0.00 36.03 2.77
3273 4699 4.142271 TGGATTTGCGTCAAGTCAAACTTT 60.142 37.500 13.80 0.00 36.03 2.66
3274 4700 3.380004 TGGATTTGCGTCAAGTCAAACTT 59.620 39.130 13.80 0.00 39.39 2.66
3275 4701 2.948979 TGGATTTGCGTCAAGTCAAACT 59.051 40.909 13.80 0.00 35.34 2.66
3276 4702 3.347958 TGGATTTGCGTCAAGTCAAAC 57.652 42.857 13.80 2.27 35.34 2.93
3277 4703 4.582701 ATTGGATTTGCGTCAAGTCAAA 57.417 36.364 13.80 10.55 32.84 2.69
3278 4704 4.377943 CGTATTGGATTTGCGTCAAGTCAA 60.378 41.667 13.80 10.00 32.84 3.18
3279 4705 3.124466 CGTATTGGATTTGCGTCAAGTCA 59.876 43.478 13.80 3.82 32.84 3.41
3280 4706 3.670203 CGTATTGGATTTGCGTCAAGTC 58.330 45.455 6.56 6.56 30.87 3.01
3281 4707 2.159572 GCGTATTGGATTTGCGTCAAGT 60.160 45.455 0.00 0.00 0.00 3.16
3282 4708 2.440501 GCGTATTGGATTTGCGTCAAG 58.559 47.619 0.00 0.00 0.00 3.02
3283 4709 1.201976 CGCGTATTGGATTTGCGTCAA 60.202 47.619 0.00 0.00 43.50 3.18
3284 4710 0.371989 CGCGTATTGGATTTGCGTCA 59.628 50.000 0.00 0.00 43.50 4.35
3285 4711 0.315869 CCGCGTATTGGATTTGCGTC 60.316 55.000 4.92 0.00 46.77 5.19
3286 4712 0.741574 TCCGCGTATTGGATTTGCGT 60.742 50.000 4.92 0.00 46.77 5.24
3288 4714 1.014352 ACTCCGCGTATTGGATTTGC 58.986 50.000 4.92 0.00 34.32 3.68
3289 4715 4.868450 TTTACTCCGCGTATTGGATTTG 57.132 40.909 4.92 0.00 34.32 2.32
3290 4716 5.163693 CCTTTTTACTCCGCGTATTGGATTT 60.164 40.000 4.92 0.00 34.32 2.17
3291 4717 4.334481 CCTTTTTACTCCGCGTATTGGATT 59.666 41.667 4.92 0.00 34.32 3.01
3292 4718 3.875134 CCTTTTTACTCCGCGTATTGGAT 59.125 43.478 4.92 0.00 34.32 3.41
3293 4719 3.055963 TCCTTTTTACTCCGCGTATTGGA 60.056 43.478 4.92 0.00 0.00 3.53
3294 4720 3.264104 TCCTTTTTACTCCGCGTATTGG 58.736 45.455 4.92 0.00 0.00 3.16
3295 4721 4.317839 CGATCCTTTTTACTCCGCGTATTG 60.318 45.833 4.92 0.00 0.00 1.90
3296 4722 3.800506 CGATCCTTTTTACTCCGCGTATT 59.199 43.478 4.92 0.00 0.00 1.89
3297 4723 3.378339 CGATCCTTTTTACTCCGCGTAT 58.622 45.455 4.92 0.00 0.00 3.06
3298 4724 2.480073 CCGATCCTTTTTACTCCGCGTA 60.480 50.000 4.92 0.00 0.00 4.42
3299 4725 1.636988 CGATCCTTTTTACTCCGCGT 58.363 50.000 4.92 0.00 0.00 6.01
3300 4726 0.928229 CCGATCCTTTTTACTCCGCG 59.072 55.000 0.00 0.00 0.00 6.46
3301 4727 2.202566 CTCCGATCCTTTTTACTCCGC 58.797 52.381 0.00 0.00 0.00 5.54
3302 4728 2.429610 TCCTCCGATCCTTTTTACTCCG 59.570 50.000 0.00 0.00 0.00 4.63
3303 4729 4.081031 ACTTCCTCCGATCCTTTTTACTCC 60.081 45.833 0.00 0.00 0.00 3.85
3304 4730 5.087391 ACTTCCTCCGATCCTTTTTACTC 57.913 43.478 0.00 0.00 0.00 2.59
3305 4731 6.809976 ATACTTCCTCCGATCCTTTTTACT 57.190 37.500 0.00 0.00 0.00 2.24
3308 4734 9.726438 CATAATATACTTCCTCCGATCCTTTTT 57.274 33.333 0.00 0.00 0.00 1.94
3309 4735 8.881262 ACATAATATACTTCCTCCGATCCTTTT 58.119 33.333 0.00 0.00 0.00 2.27
3310 4736 8.437274 ACATAATATACTTCCTCCGATCCTTT 57.563 34.615 0.00 0.00 0.00 3.11
3311 4737 8.437274 AACATAATATACTTCCTCCGATCCTT 57.563 34.615 0.00 0.00 0.00 3.36
3312 4738 7.674348 TGAACATAATATACTTCCTCCGATCCT 59.326 37.037 0.00 0.00 0.00 3.24
3313 4739 7.760340 GTGAACATAATATACTTCCTCCGATCC 59.240 40.741 0.00 0.00 0.00 3.36
3314 4740 8.304596 TGTGAACATAATATACTTCCTCCGATC 58.695 37.037 0.00 0.00 0.00 3.69
3315 4741 8.190326 TGTGAACATAATATACTTCCTCCGAT 57.810 34.615 0.00 0.00 0.00 4.18
3316 4742 7.591421 TGTGAACATAATATACTTCCTCCGA 57.409 36.000 0.00 0.00 0.00 4.55
3317 4743 8.141909 TCTTGTGAACATAATATACTTCCTCCG 58.858 37.037 0.00 0.00 0.00 4.63
3318 4744 9.482627 CTCTTGTGAACATAATATACTTCCTCC 57.517 37.037 0.00 0.00 0.00 4.30
3319 4745 9.482627 CCTCTTGTGAACATAATATACTTCCTC 57.517 37.037 0.00 0.00 0.00 3.71
3320 4746 9.213777 TCCTCTTGTGAACATAATATACTTCCT 57.786 33.333 0.00 0.00 0.00 3.36
3321 4747 9.832445 TTCCTCTTGTGAACATAATATACTTCC 57.168 33.333 0.00 0.00 0.00 3.46
3349 6211 1.689813 CCATGGCACGTATACCCTACA 59.310 52.381 0.00 0.00 0.00 2.74
3355 6217 1.411246 TGGAGACCATGGCACGTATAC 59.589 52.381 13.04 0.00 0.00 1.47
3364 6226 6.548622 ACATGAATTTTCTATGGAGACCATGG 59.451 38.462 11.19 11.19 44.84 3.66
3369 6231 8.946085 TGTAACACATGAATTTTCTATGGAGAC 58.054 33.333 0.00 0.00 0.00 3.36
3418 6289 8.864069 ACATTCACGAGAGATAGAAATTAGTG 57.136 34.615 0.00 0.00 0.00 2.74
3429 6300 8.197439 TGTGTAAATCATACATTCACGAGAGAT 58.803 33.333 0.00 0.00 0.00 2.75
3435 6308 9.175060 TGTTTTTGTGTAAATCATACATTCACG 57.825 29.630 0.00 0.00 0.00 4.35
3450 6323 9.909644 TTTTAGTTGCTTAGTTGTTTTTGTGTA 57.090 25.926 0.00 0.00 0.00 2.90
3630 6700 1.070134 GTCAAGCCTAGTCCACACACA 59.930 52.381 0.00 0.00 0.00 3.72
3773 6843 8.580720 AGGCAATGTAACATTATTGTTGTAACA 58.419 29.630 12.20 9.32 45.56 2.41
3774 6844 8.980143 AGGCAATGTAACATTATTGTTGTAAC 57.020 30.769 12.20 4.61 45.56 2.50
3800 6870 8.752187 TGATTAGAATAGCTGGCTTCAAAAATT 58.248 29.630 0.00 0.00 0.00 1.82
3801 6871 8.297470 TGATTAGAATAGCTGGCTTCAAAAAT 57.703 30.769 0.00 0.00 0.00 1.82
3807 6878 8.093927 AGAAGTATGATTAGAATAGCTGGCTTC 58.906 37.037 0.00 0.00 0.00 3.86
3833 6911 3.444742 CAGCCTATCAAGGTGAATGCAAA 59.555 43.478 0.00 0.00 45.64 3.68
3914 6992 5.175859 ACTACTTACGCGGTACTAAGTACA 58.824 41.667 17.97 6.40 40.41 2.90
3936 7014 9.630098 AAATCAAATAGTGTGATCATCAACAAC 57.370 29.630 0.00 0.00 34.60 3.32
3989 7068 8.631676 AAAATCAATTGCATTTGTCCAAAAAC 57.368 26.923 18.16 0.00 33.56 2.43
4079 7160 8.842764 ACCCCTAATACTCCTTCTTATTCAAAA 58.157 33.333 0.00 0.00 0.00 2.44
4080 7161 8.401955 ACCCCTAATACTCCTTCTTATTCAAA 57.598 34.615 0.00 0.00 0.00 2.69
4279 7361 1.550524 TGCCTTATGTTGCTCGTCTCT 59.449 47.619 0.00 0.00 0.00 3.10
4383 7465 2.365582 GCCTTCATGACATTTACCCGT 58.634 47.619 0.00 0.00 0.00 5.28
4828 7918 2.290577 GGTCCAGAAAGCACTCCTCAAT 60.291 50.000 0.00 0.00 0.00 2.57
4837 7927 0.036732 ATTGCTCGGTCCAGAAAGCA 59.963 50.000 2.09 2.09 42.66 3.91
4963 8053 0.179015 TTGCGGCCTCCACAAAAGTA 60.179 50.000 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.