Multiple sequence alignment - TraesCS5A01G285700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G285700 chr5A 100.000 5177 0 0 1 5177 493778351 493783527 0.000000e+00 9561
1 TraesCS5A01G285700 chr5A 86.736 1146 84 41 859 1987 493662035 493663129 0.000000e+00 1212
2 TraesCS5A01G285700 chr5A 82.759 899 141 12 3461 4356 493664224 493665111 0.000000e+00 789
3 TraesCS5A01G285700 chr5A 83.838 792 84 23 994 1775 493817929 493817172 0.000000e+00 713
4 TraesCS5A01G285700 chr5A 80.483 538 68 25 997 1532 492637159 492636657 1.360000e-100 377
5 TraesCS5A01G285700 chr5A 89.123 285 27 4 2790 3072 301232679 301232397 8.250000e-93 351
6 TraesCS5A01G285700 chr5A 86.885 305 40 0 4387 4691 673834779 673835083 4.960000e-90 342
7 TraesCS5A01G285700 chr5A 97.283 184 4 1 3072 3255 708636023 708635841 1.400000e-80 311
8 TraesCS5A01G285700 chr5A 83.399 253 24 12 2154 2405 493663133 493663368 8.730000e-53 219
9 TraesCS5A01G285700 chr5A 90.083 121 9 3 2409 2528 493780642 493780760 2.500000e-33 154
10 TraesCS5A01G285700 chr5A 90.083 121 9 3 2292 2410 493780759 493780878 2.500000e-33 154
11 TraesCS5A01G285700 chr5D 91.926 1350 61 21 860 2190 390417710 390419030 0.000000e+00 1845
12 TraesCS5A01G285700 chr5D 92.127 1194 65 11 3510 4681 390421092 390422278 0.000000e+00 1657
13 TraesCS5A01G285700 chr5D 86.579 1140 73 38 860 1993 390371370 390372435 0.000000e+00 1184
14 TraesCS5A01G285700 chr5D 83.315 905 137 12 3456 4356 390373479 390374373 0.000000e+00 822
15 TraesCS5A01G285700 chr5D 84.615 780 83 19 998 1775 390504140 390504884 0.000000e+00 741
16 TraesCS5A01G285700 chr5D 94.397 464 19 4 2184 2646 390419665 390420122 0.000000e+00 706
17 TraesCS5A01G285700 chr5D 90.130 385 26 8 2688 3072 390420357 390420729 1.680000e-134 490
18 TraesCS5A01G285700 chr5D 92.531 241 18 0 3251 3491 390420722 390420962 3.840000e-91 346
19 TraesCS5A01G285700 chr5D 90.299 134 13 0 2281 2414 390372524 390372657 5.330000e-40 176
20 TraesCS5A01G285700 chr5D 89.706 136 13 1 2409 2544 390372535 390372669 6.890000e-39 172
21 TraesCS5A01G285700 chr5D 91.803 122 9 1 3248 3368 473409243 473409364 8.920000e-38 169
22 TraesCS5A01G285700 chr5D 90.833 120 10 1 2409 2528 390419768 390419886 5.370000e-35 159
23 TraesCS5A01G285700 chr5D 88.235 119 13 1 2292 2409 390419885 390420003 1.940000e-29 141
24 TraesCS5A01G285700 chr5B 95.300 1149 41 7 860 2001 470511966 470513108 0.000000e+00 1810
25 TraesCS5A01G285700 chr5B 89.124 1462 112 11 3252 4690 470514405 470515842 0.000000e+00 1775
26 TraesCS5A01G285700 chr5B 87.533 1139 74 41 860 1987 470435882 470436963 0.000000e+00 1254
27 TraesCS5A01G285700 chr5B 90.356 674 39 13 2006 2662 470513170 470513834 0.000000e+00 861
28 TraesCS5A01G285700 chr5B 83.128 895 133 14 3467 4356 470438066 470438947 0.000000e+00 800
29 TraesCS5A01G285700 chr5B 80.855 538 75 23 997 1532 469125061 469124550 1.040000e-106 398
30 TraesCS5A01G285700 chr5B 87.252 353 38 4 2721 3072 470514065 470514411 3.760000e-106 396
31 TraesCS5A01G285700 chr5B 81.742 356 30 17 1193 1547 470604048 470604369 1.110000e-66 265
32 TraesCS5A01G285700 chr2A 93.844 861 51 2 1 860 166852290 166851431 0.000000e+00 1295
33 TraesCS5A01G285700 chr2A 92.468 863 61 4 1 862 651134121 651133262 0.000000e+00 1230
34 TraesCS5A01G285700 chr2A 87.879 297 36 0 4385 4681 398458327 398458623 2.970000e-92 350
35 TraesCS5A01G285700 chr2A 87.255 306 39 0 4385 4690 398857246 398856941 2.970000e-92 350
36 TraesCS5A01G285700 chr2A 81.250 480 45 16 4684 5151 591736665 591736219 3.840000e-91 346
37 TraesCS5A01G285700 chr2D 93.279 863 54 4 1 862 562894746 562895605 0.000000e+00 1269
38 TraesCS5A01G285700 chr2D 93.159 497 31 1 4684 5177 56316385 56316881 0.000000e+00 726
39 TraesCS5A01G285700 chr1D 92.907 860 59 2 1 860 469096522 469095665 0.000000e+00 1249
40 TraesCS5A01G285700 chr1D 87.255 306 38 1 4386 4691 202550647 202550951 1.070000e-91 348
41 TraesCS5A01G285700 chr1D 88.727 275 27 2 4684 4955 80013323 80013050 2.990000e-87 333
42 TraesCS5A01G285700 chr1D 91.453 117 10 0 3252 3368 463085282 463085398 1.490000e-35 161
43 TraesCS5A01G285700 chr1D 90.598 117 11 0 3252 3368 174157369 174157485 6.940000e-34 156
44 TraesCS5A01G285700 chr7D 93.059 850 57 2 1 849 46602695 46603543 0.000000e+00 1242
45 TraesCS5A01G285700 chr7D 92.700 863 59 4 1 862 565208285 565207426 0.000000e+00 1242
46 TraesCS5A01G285700 chr7D 90.984 122 10 1 3248 3368 400151011 400151132 4.150000e-36 163
47 TraesCS5A01G285700 chr1B 92.468 863 59 3 1 863 625465625 625466481 0.000000e+00 1229
48 TraesCS5A01G285700 chr1B 86.971 307 39 1 4385 4691 296322921 296323226 1.380000e-90 344
49 TraesCS5A01G285700 chr1A 92.343 862 66 0 1 862 21500654 21501515 0.000000e+00 1227
50 TraesCS5A01G285700 chr1A 92.343 862 66 0 1 862 21508805 21509666 0.000000e+00 1227
51 TraesCS5A01G285700 chr3D 81.414 608 59 38 998 1592 564806676 564807242 1.020000e-121 448
52 TraesCS5A01G285700 chr3D 92.308 117 8 1 3252 3368 83095292 83095177 1.150000e-36 165
53 TraesCS5A01G285700 chr7B 88.215 297 34 1 4386 4681 99137717 99138013 2.290000e-93 353
54 TraesCS5A01G285700 chr7B 93.162 117 8 0 3252 3368 708310961 708311077 6.890000e-39 172
55 TraesCS5A01G285700 chr7B 91.803 122 9 1 3248 3368 409424817 409424938 8.920000e-38 169
56 TraesCS5A01G285700 chr4D 87.919 298 33 3 4385 4681 81965001 81965296 1.070000e-91 348
57 TraesCS5A01G285700 chr4D 83.803 284 41 3 2793 3072 118305303 118305585 1.110000e-66 265
58 TraesCS5A01G285700 chr4D 92.982 114 8 0 3255 3368 484179285 484179172 3.210000e-37 167
59 TraesCS5A01G285700 chr6A 94.898 196 8 2 3061 3256 606716827 606716634 6.510000e-79 305
60 TraesCS5A01G285700 chr6A 96.629 178 4 1 3073 3250 176999387 176999562 1.410000e-75 294
61 TraesCS5A01G285700 chr6D 85.813 289 37 4 2790 3075 125083113 125082826 2.340000e-78 303
62 TraesCS5A01G285700 chr4B 97.222 180 3 1 3073 3252 556894274 556894451 2.340000e-78 303
63 TraesCS5A01G285700 chr4A 96.739 184 2 3 3069 3250 594701758 594701577 2.340000e-78 303
64 TraesCS5A01G285700 chr4A 96.648 179 5 1 3073 3251 613154398 613154575 3.920000e-76 296
65 TraesCS5A01G285700 chr3A 96.175 183 5 1 3072 3254 723657753 723657573 1.090000e-76 298
66 TraesCS5A01G285700 chr3A 93.367 196 8 4 3065 3258 464248463 464248271 8.480000e-73 285
67 TraesCS5A01G285700 chr2B 96.629 178 5 1 3073 3250 755344054 755343878 1.410000e-75 294
68 TraesCS5A01G285700 chr2B 85.263 285 38 4 2791 3072 474556791 474556508 1.820000e-74 291
69 TraesCS5A01G285700 chr6B 84.859 284 41 2 2790 3072 223265554 223265272 8.480000e-73 285
70 TraesCS5A01G285700 chr6B 82.456 285 44 5 2791 3070 399729718 399729435 1.440000e-60 244
71 TraesCS5A01G285700 chr6B 80.836 287 49 6 2790 3072 462548408 462548692 2.430000e-53 220
72 TraesCS5A01G285700 chrUn 88.670 203 17 3 4834 5033 78795058 78794859 5.180000e-60 243
73 TraesCS5A01G285700 chrUn 92.908 141 8 2 5035 5175 411810601 411810463 2.440000e-48 204


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G285700 chr5A 493778351 493783527 5176 False 3289.666667 9561 93.388667 1 5177 3 chr5A.!!$F3 5176
1 TraesCS5A01G285700 chr5A 493662035 493665111 3076 False 740.000000 1212 84.298000 859 4356 3 chr5A.!!$F2 3497
2 TraesCS5A01G285700 chr5A 493817172 493817929 757 True 713.000000 713 83.838000 994 1775 1 chr5A.!!$R3 781
3 TraesCS5A01G285700 chr5A 492636657 492637159 502 True 377.000000 377 80.483000 997 1532 1 chr5A.!!$R2 535
4 TraesCS5A01G285700 chr5D 390417710 390422278 4568 False 763.428571 1845 91.454143 860 4681 7 chr5D.!!$F4 3821
5 TraesCS5A01G285700 chr5D 390504140 390504884 744 False 741.000000 741 84.615000 998 1775 1 chr5D.!!$F1 777
6 TraesCS5A01G285700 chr5D 390371370 390374373 3003 False 588.500000 1184 87.474750 860 4356 4 chr5D.!!$F3 3496
7 TraesCS5A01G285700 chr5B 470511966 470515842 3876 False 1210.500000 1810 90.508000 860 4690 4 chr5B.!!$F3 3830
8 TraesCS5A01G285700 chr5B 470435882 470438947 3065 False 1027.000000 1254 85.330500 860 4356 2 chr5B.!!$F2 3496
9 TraesCS5A01G285700 chr5B 469124550 469125061 511 True 398.000000 398 80.855000 997 1532 1 chr5B.!!$R1 535
10 TraesCS5A01G285700 chr2A 166851431 166852290 859 True 1295.000000 1295 93.844000 1 860 1 chr2A.!!$R1 859
11 TraesCS5A01G285700 chr2A 651133262 651134121 859 True 1230.000000 1230 92.468000 1 862 1 chr2A.!!$R4 861
12 TraesCS5A01G285700 chr2D 562894746 562895605 859 False 1269.000000 1269 93.279000 1 862 1 chr2D.!!$F2 861
13 TraesCS5A01G285700 chr1D 469095665 469096522 857 True 1249.000000 1249 92.907000 1 860 1 chr1D.!!$R2 859
14 TraesCS5A01G285700 chr7D 46602695 46603543 848 False 1242.000000 1242 93.059000 1 849 1 chr7D.!!$F1 848
15 TraesCS5A01G285700 chr7D 565207426 565208285 859 True 1242.000000 1242 92.700000 1 862 1 chr7D.!!$R1 861
16 TraesCS5A01G285700 chr1B 625465625 625466481 856 False 1229.000000 1229 92.468000 1 863 1 chr1B.!!$F2 862
17 TraesCS5A01G285700 chr1A 21500654 21501515 861 False 1227.000000 1227 92.343000 1 862 1 chr1A.!!$F1 861
18 TraesCS5A01G285700 chr1A 21508805 21509666 861 False 1227.000000 1227 92.343000 1 862 1 chr1A.!!$F2 861
19 TraesCS5A01G285700 chr3D 564806676 564807242 566 False 448.000000 448 81.414000 998 1592 1 chr3D.!!$F1 594

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
678 681 0.393944 CATGAGACATGGCTGCTGGT 60.394 55.000 5.31 0.00 0.0 4.00 F
850 853 0.675522 CGTTTGGGTCGCCCTATTGT 60.676 55.000 14.76 0.00 45.7 2.71 F
2668 3569 1.153628 CCTACTGTACACTGGCGCC 60.154 63.158 22.73 22.73 0.0 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2672 3573 0.762461 TTTGCACTTTTGGGGGAGGG 60.762 55.000 0.0 0.0 0.0 4.30 R
2674 3575 1.118838 TGTTTGCACTTTTGGGGGAG 58.881 50.000 0.0 0.0 0.0 4.30 R
4552 6032 1.210967 TGAGAAAGTGTTGACCCGGTT 59.789 47.619 0.0 0.0 0.0 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 96 1.065854 CCAAGAAGGAGGACAAGCGAT 60.066 52.381 0.00 0.00 41.22 4.58
98 99 4.039245 CCAAGAAGGAGGACAAGCGATATA 59.961 45.833 0.00 0.00 41.22 0.86
149 150 3.058639 GGACGGCATGATGAATAAGAAGC 60.059 47.826 0.00 0.00 0.00 3.86
324 325 1.734388 GCCAACGCCAAGACAAAGGT 61.734 55.000 0.00 0.00 0.00 3.50
496 498 2.223249 CCATCCTTTTTGTATGTCGGCG 60.223 50.000 0.00 0.00 0.00 6.46
678 681 0.393944 CATGAGACATGGCTGCTGGT 60.394 55.000 5.31 0.00 0.00 4.00
693 696 1.744320 CTGGTATGATCGGCCACGGA 61.744 60.000 2.24 0.00 41.39 4.69
694 697 1.118965 TGGTATGATCGGCCACGGAT 61.119 55.000 2.24 0.00 41.39 4.18
745 748 3.570540 TGAAATGGATTGGTGTGTTGGA 58.429 40.909 0.00 0.00 0.00 3.53
758 761 1.240641 TGTTGGACGCATTGCCGATT 61.241 50.000 2.41 0.00 0.00 3.34
781 784 8.918961 ATTCAAATGTAAAACTGAACGAACAA 57.081 26.923 0.00 0.00 31.00 2.83
850 853 0.675522 CGTTTGGGTCGCCCTATTGT 60.676 55.000 14.76 0.00 45.70 2.71
975 989 1.507141 GCACCAAACCACGAGTGAGG 61.507 60.000 4.59 4.02 31.79 3.86
1245 1262 3.470567 GTCGCCAAGCTCGTCGTG 61.471 66.667 0.00 0.00 0.00 4.35
1297 1314 2.274760 GCTGGAGGCAATGGAGCT 59.725 61.111 0.00 0.00 41.35 4.09
1852 1911 8.537728 AACAATTTATTCATCCAGGCATTCTA 57.462 30.769 0.00 0.00 0.00 2.10
1866 1932 6.373774 CCAGGCATTCTATGATTATCAACCTC 59.626 42.308 0.00 0.00 0.00 3.85
1868 1934 7.119407 CAGGCATTCTATGATTATCAACCTCTG 59.881 40.741 0.00 0.00 0.00 3.35
1885 1952 6.199937 ACCTCTGTGTTTTGCAATGATATC 57.800 37.500 0.00 0.00 0.00 1.63
2017 2148 8.479280 TCGTTCACAAATACGTACTAACTTTTC 58.521 33.333 0.00 0.00 38.79 2.29
2109 2240 6.592607 TCCTATACAGAAATGTCCAAAACGTC 59.407 38.462 0.00 0.00 0.00 4.34
2117 2248 9.490663 CAGAAATGTCCAAAACGTCTTATATTC 57.509 33.333 0.00 0.00 0.00 1.75
2118 2249 9.449719 AGAAATGTCCAAAACGTCTTATATTCT 57.550 29.630 0.00 0.00 0.00 2.40
2121 2252 7.745022 TGTCCAAAACGTCTTATATTCTACG 57.255 36.000 0.00 0.00 40.99 3.51
2213 2999 7.148573 CGACAACTTATCATGCTCTAGTTTGTT 60.149 37.037 0.00 0.00 0.00 2.83
2214 3000 8.396272 ACAACTTATCATGCTCTAGTTTGTTT 57.604 30.769 0.00 0.00 0.00 2.83
2215 3001 9.502091 ACAACTTATCATGCTCTAGTTTGTTTA 57.498 29.630 0.00 0.00 0.00 2.01
2300 3088 2.489971 TGTGTCCACGGAAACATCTTC 58.510 47.619 4.90 0.00 37.43 2.87
2363 3153 1.737363 GCCAACTTTGCCACAAACGAA 60.737 47.619 0.00 0.00 0.00 3.85
2375 3165 3.005367 CCACAAACGAACTTAGGCCAAAT 59.995 43.478 5.01 0.00 0.00 2.32
2405 3195 5.642686 TGAAAACCAAAACGTCTAAAGTGG 58.357 37.500 0.00 0.00 0.00 4.00
2530 3320 8.029642 ACCAAAACATCTAAAGTGACTAATCG 57.970 34.615 0.00 0.00 0.00 3.34
2534 3324 8.467402 AAACATCTAAAGTGACTAATCGACTG 57.533 34.615 0.00 0.00 0.00 3.51
2535 3325 7.159322 ACATCTAAAGTGACTAATCGACTGT 57.841 36.000 0.00 0.00 0.00 3.55
2630 3531 5.014808 ACGTACACAACCTGAACTACTTT 57.985 39.130 0.00 0.00 0.00 2.66
2662 3563 3.714144 AGCAGAATCCCTACTGTACACT 58.286 45.455 0.00 0.00 36.62 3.55
2663 3564 3.449018 AGCAGAATCCCTACTGTACACTG 59.551 47.826 0.00 0.00 36.62 3.66
2668 3569 1.153628 CCTACTGTACACTGGCGCC 60.154 63.158 22.73 22.73 0.00 6.53
2685 3586 4.759205 CCCGCCCTCCCCCAAAAG 62.759 72.222 0.00 0.00 0.00 2.27
2686 3587 3.979497 CCGCCCTCCCCCAAAAGT 61.979 66.667 0.00 0.00 0.00 2.66
2833 3928 4.331992 GCGGTAAAGGAACAGAAAGTATCC 59.668 45.833 0.00 0.00 0.00 2.59
2869 3964 1.080498 AGAGGTGACCCTGGGTTATCA 59.920 52.381 21.59 10.93 42.86 2.15
2873 3968 2.041216 GGTGACCCTGGGTTATCAAACT 59.959 50.000 21.59 0.00 35.25 2.66
2909 4004 5.780282 TCTTCCTTGAAGTGATGGTCTCTAA 59.220 40.000 3.95 0.00 40.24 2.10
2914 4009 6.419484 TTGAAGTGATGGTCTCTAACAAGA 57.581 37.500 0.00 0.00 0.00 3.02
3072 4167 7.031226 TGATCTTAATTTATGCACTGGAAGC 57.969 36.000 0.00 0.00 37.60 3.86
3074 4169 6.441093 TCTTAATTTATGCACTGGAAGCAG 57.559 37.500 0.00 0.00 46.36 4.24
3075 4170 5.945784 TCTTAATTTATGCACTGGAAGCAGT 59.054 36.000 0.00 0.00 46.36 4.40
3080 4175 3.052082 CACTGGAAGCAGTGGCGG 61.052 66.667 0.00 0.00 46.37 6.13
3094 4189 4.143333 GCGGCGCCAGGTTCTAGA 62.143 66.667 28.98 0.00 0.00 2.43
3095 4190 2.105128 CGGCGCCAGGTTCTAGAG 59.895 66.667 28.98 0.98 0.00 2.43
3096 4191 2.501610 GGCGCCAGGTTCTAGAGG 59.498 66.667 24.80 0.00 0.00 3.69
3097 4192 2.501610 GCGCCAGGTTCTAGAGGG 59.498 66.667 0.00 0.00 0.00 4.30
3098 4193 2.359967 GCGCCAGGTTCTAGAGGGT 61.360 63.158 0.00 0.00 0.00 4.34
3099 4194 1.517832 CGCCAGGTTCTAGAGGGTG 59.482 63.158 0.00 0.00 0.00 4.61
3100 4195 1.908483 GCCAGGTTCTAGAGGGTGG 59.092 63.158 10.56 10.56 0.00 4.61
3101 4196 1.627297 GCCAGGTTCTAGAGGGTGGG 61.627 65.000 14.78 6.76 0.00 4.61
3102 4197 0.252742 CCAGGTTCTAGAGGGTGGGT 60.253 60.000 7.98 0.00 0.00 4.51
3103 4198 1.007963 CCAGGTTCTAGAGGGTGGGTA 59.992 57.143 7.98 0.00 0.00 3.69
3104 4199 2.360423 CCAGGTTCTAGAGGGTGGGTAT 60.360 54.545 7.98 0.00 0.00 2.73
3105 4200 3.385115 CAGGTTCTAGAGGGTGGGTATT 58.615 50.000 0.00 0.00 0.00 1.89
3106 4201 3.388350 CAGGTTCTAGAGGGTGGGTATTC 59.612 52.174 0.00 0.00 0.00 1.75
3107 4202 3.013648 AGGTTCTAGAGGGTGGGTATTCA 59.986 47.826 0.00 0.00 0.00 2.57
3108 4203 3.974642 GGTTCTAGAGGGTGGGTATTCAT 59.025 47.826 0.00 0.00 0.00 2.57
3109 4204 4.412528 GGTTCTAGAGGGTGGGTATTCATT 59.587 45.833 0.00 0.00 0.00 2.57
3110 4205 5.104067 GGTTCTAGAGGGTGGGTATTCATTT 60.104 44.000 0.00 0.00 0.00 2.32
3111 4206 6.424032 GTTCTAGAGGGTGGGTATTCATTTT 58.576 40.000 0.00 0.00 0.00 1.82
3112 4207 6.001449 TCTAGAGGGTGGGTATTCATTTTG 57.999 41.667 0.00 0.00 0.00 2.44
3113 4208 3.981212 AGAGGGTGGGTATTCATTTTGG 58.019 45.455 0.00 0.00 0.00 3.28
3114 4209 3.596046 AGAGGGTGGGTATTCATTTTGGA 59.404 43.478 0.00 0.00 0.00 3.53
3115 4210 3.954258 GAGGGTGGGTATTCATTTTGGAG 59.046 47.826 0.00 0.00 0.00 3.86
3116 4211 3.031013 GGGTGGGTATTCATTTTGGAGG 58.969 50.000 0.00 0.00 0.00 4.30
3117 4212 3.309556 GGGTGGGTATTCATTTTGGAGGA 60.310 47.826 0.00 0.00 0.00 3.71
3118 4213 3.954258 GGTGGGTATTCATTTTGGAGGAG 59.046 47.826 0.00 0.00 0.00 3.69
3119 4214 3.954258 GTGGGTATTCATTTTGGAGGAGG 59.046 47.826 0.00 0.00 0.00 4.30
3120 4215 3.052944 TGGGTATTCATTTTGGAGGAGGG 60.053 47.826 0.00 0.00 0.00 4.30
3121 4216 3.052869 GGGTATTCATTTTGGAGGAGGGT 60.053 47.826 0.00 0.00 0.00 4.34
3122 4217 4.167307 GGGTATTCATTTTGGAGGAGGGTA 59.833 45.833 0.00 0.00 0.00 3.69
3123 4218 5.162980 GGGTATTCATTTTGGAGGAGGGTAT 60.163 44.000 0.00 0.00 0.00 2.73
3124 4219 6.373759 GGTATTCATTTTGGAGGAGGGTATT 58.626 40.000 0.00 0.00 0.00 1.89
3125 4220 6.490381 GGTATTCATTTTGGAGGAGGGTATTC 59.510 42.308 0.00 0.00 0.00 1.75
3126 4221 5.528600 TTCATTTTGGAGGAGGGTATTCA 57.471 39.130 0.00 0.00 0.00 2.57
3127 4222 5.732331 TCATTTTGGAGGAGGGTATTCAT 57.268 39.130 0.00 0.00 0.00 2.57
3128 4223 6.091076 TCATTTTGGAGGAGGGTATTCATT 57.909 37.500 0.00 0.00 0.00 2.57
3129 4224 6.502138 TCATTTTGGAGGAGGGTATTCATTT 58.498 36.000 0.00 0.00 0.00 2.32
3130 4225 6.959366 TCATTTTGGAGGAGGGTATTCATTTT 59.041 34.615 0.00 0.00 0.00 1.82
3131 4226 6.603940 TTTTGGAGGAGGGTATTCATTTTG 57.396 37.500 0.00 0.00 0.00 2.44
3132 4227 3.631250 TGGAGGAGGGTATTCATTTTGC 58.369 45.455 0.00 0.00 0.00 3.68
3133 4228 2.959030 GGAGGAGGGTATTCATTTTGCC 59.041 50.000 0.00 0.00 0.00 4.52
3134 4229 2.959030 GAGGAGGGTATTCATTTTGCCC 59.041 50.000 0.00 0.00 39.60 5.36
3135 4230 2.314549 AGGAGGGTATTCATTTTGCCCA 59.685 45.455 0.00 0.00 41.67 5.36
3136 4231 3.103742 GGAGGGTATTCATTTTGCCCAA 58.896 45.455 0.00 0.00 41.67 4.12
3137 4232 3.517500 GGAGGGTATTCATTTTGCCCAAA 59.482 43.478 0.00 0.00 41.67 3.28
3138 4233 4.164030 GGAGGGTATTCATTTTGCCCAAAT 59.836 41.667 0.00 0.00 41.67 2.32
3139 4234 5.357742 AGGGTATTCATTTTGCCCAAATC 57.642 39.130 0.00 0.00 41.67 2.17
3140 4235 4.782156 AGGGTATTCATTTTGCCCAAATCA 59.218 37.500 0.00 0.00 41.67 2.57
3141 4236 5.429435 AGGGTATTCATTTTGCCCAAATCAT 59.571 36.000 0.00 0.00 41.67 2.45
3142 4237 5.759763 GGGTATTCATTTTGCCCAAATCATC 59.240 40.000 0.00 0.00 39.13 2.92
3143 4238 6.347696 GGTATTCATTTTGCCCAAATCATCA 58.652 36.000 0.00 0.00 32.24 3.07
3144 4239 6.258507 GGTATTCATTTTGCCCAAATCATCAC 59.741 38.462 0.00 0.00 32.24 3.06
3145 4240 5.486735 TTCATTTTGCCCAAATCATCACT 57.513 34.783 0.00 0.00 32.24 3.41
3146 4241 4.823157 TCATTTTGCCCAAATCATCACTG 58.177 39.130 0.00 0.00 32.24 3.66
3147 4242 4.283978 TCATTTTGCCCAAATCATCACTGT 59.716 37.500 0.00 0.00 32.24 3.55
3148 4243 4.686191 TTTTGCCCAAATCATCACTGTT 57.314 36.364 0.00 0.00 0.00 3.16
3149 4244 4.686191 TTTGCCCAAATCATCACTGTTT 57.314 36.364 0.00 0.00 0.00 2.83
3150 4245 4.686191 TTGCCCAAATCATCACTGTTTT 57.314 36.364 0.00 0.00 0.00 2.43
3151 4246 3.992643 TGCCCAAATCATCACTGTTTTG 58.007 40.909 0.00 0.00 39.87 2.44
3152 4247 2.738314 GCCCAAATCATCACTGTTTTGC 59.262 45.455 4.41 0.00 39.29 3.68
3153 4248 3.803021 GCCCAAATCATCACTGTTTTGCA 60.803 43.478 0.00 0.00 39.29 4.08
3154 4249 4.378774 CCCAAATCATCACTGTTTTGCAA 58.621 39.130 0.00 0.00 39.29 4.08
3155 4250 4.815308 CCCAAATCATCACTGTTTTGCAAA 59.185 37.500 8.05 8.05 39.29 3.68
3156 4251 5.296283 CCCAAATCATCACTGTTTTGCAAAA 59.704 36.000 20.46 20.46 39.29 2.44
3157 4252 6.183360 CCCAAATCATCACTGTTTTGCAAAAA 60.183 34.615 25.40 10.76 39.29 1.94
3206 4301 7.551035 TTTCAATGGTTTGTCAAAATCTTGG 57.449 32.000 0.00 0.00 34.32 3.61
3207 4302 5.609423 TCAATGGTTTGTCAAAATCTTGGG 58.391 37.500 0.00 0.00 34.32 4.12
3209 4304 6.325028 TCAATGGTTTGTCAAAATCTTGGGTA 59.675 34.615 0.00 0.00 34.32 3.69
3212 4307 6.754193 TGGTTTGTCAAAATCTTGGGTATTC 58.246 36.000 0.00 0.00 33.01 1.75
3215 4310 7.170828 GGTTTGTCAAAATCTTGGGTATTCAAC 59.829 37.037 0.00 0.00 33.01 3.18
3233 4328 3.822167 TCAACCGAATACCCAAAAAGACC 59.178 43.478 0.00 0.00 0.00 3.85
3234 4329 2.799017 ACCGAATACCCAAAAAGACCC 58.201 47.619 0.00 0.00 0.00 4.46
3237 4332 3.130340 CCGAATACCCAAAAAGACCCATG 59.870 47.826 0.00 0.00 0.00 3.66
3238 4333 3.130340 CGAATACCCAAAAAGACCCATGG 59.870 47.826 4.14 4.14 0.00 3.66
3239 4334 1.931635 TACCCAAAAAGACCCATGGC 58.068 50.000 6.09 0.00 0.00 4.40
3240 4335 1.184970 ACCCAAAAAGACCCATGGCG 61.185 55.000 6.09 2.02 0.00 5.69
3241 4336 1.079888 CCAAAAAGACCCATGGCGC 60.080 57.895 6.09 0.00 0.00 6.53
3242 4337 1.079888 CAAAAAGACCCATGGCGCC 60.080 57.895 22.73 22.73 0.00 6.53
3322 4417 4.202514 TGTGTCCAAATAACATCCTGACCA 60.203 41.667 0.00 0.00 0.00 4.02
3332 4427 0.900182 ATCCTGACCAGCACGAGTCA 60.900 55.000 0.00 0.00 40.61 3.41
3351 4446 3.374988 GTCATGCATCAAGAATCGGTTGA 59.625 43.478 0.00 0.00 38.28 3.18
3496 4827 8.571336 CAATAGTGGGCCTTATATTTCAGAAAG 58.429 37.037 4.53 0.00 0.00 2.62
3498 4829 4.584743 GTGGGCCTTATATTTCAGAAAGGG 59.415 45.833 4.53 0.61 39.14 3.95
3500 4831 4.152647 GGCCTTATATTTCAGAAAGGGGG 58.847 47.826 0.00 1.25 39.14 5.40
3584 5026 1.816224 TCGTGAATGACACCGATCTGA 59.184 47.619 0.00 0.00 45.73 3.27
3587 5029 0.924090 GAATGACACCGATCTGACGC 59.076 55.000 0.00 0.00 0.00 5.19
3904 5349 2.745492 GCTGCACTGCCTCAGTCC 60.745 66.667 0.00 0.00 43.43 3.85
4085 5538 3.898517 ACTAAAACCGCTCTTTGCTTC 57.101 42.857 0.00 0.00 40.11 3.86
4091 5544 2.147150 ACCGCTCTTTGCTTCTTCTTC 58.853 47.619 0.00 0.00 40.11 2.87
4221 5675 7.935405 TCTAGTTTATCTTGGGGGTTTGTTAT 58.065 34.615 0.00 0.00 0.00 1.89
4222 5676 9.060137 TCTAGTTTATCTTGGGGGTTTGTTATA 57.940 33.333 0.00 0.00 0.00 0.98
4223 5677 9.862149 CTAGTTTATCTTGGGGGTTTGTTATAT 57.138 33.333 0.00 0.00 0.00 0.86
4252 5712 3.941483 GTGTGCCTACAAGATGTAGCAAT 59.059 43.478 11.19 0.00 46.72 3.56
4301 5761 1.039856 ATGTGCTTTGGCCGTTCTTT 58.960 45.000 0.00 0.00 37.74 2.52
4374 5834 9.781633 AATAGTTATCGCGAGTATCCTCTATAT 57.218 33.333 16.66 0.00 35.43 0.86
4390 5870 8.347004 TCCTCTATATCACTAAGCTCATTCAG 57.653 38.462 0.00 0.00 0.00 3.02
4401 5881 3.608316 GCTCATTCAGTTGAGGTCTCT 57.392 47.619 3.85 0.00 42.78 3.10
4412 5892 9.658799 TTCAGTTGAGGTCTCTAATTAGAATTG 57.341 33.333 15.85 6.88 0.00 2.32
4429 5909 3.100207 ATTGGGTCACCCGATTTTGAT 57.900 42.857 10.32 0.00 45.09 2.57
4449 5929 5.009631 TGATCGGGTCAACAATTTCTCAAT 58.990 37.500 0.00 0.00 32.78 2.57
4459 5939 5.876612 ACAATTTCTCAATGCTCTCTCAC 57.123 39.130 0.00 0.00 0.00 3.51
4502 5982 7.253905 ACACTATGCTCCCTAAGTTTTAAGA 57.746 36.000 0.00 0.00 0.00 2.10
4504 5984 7.770897 ACACTATGCTCCCTAAGTTTTAAGATG 59.229 37.037 0.00 0.00 0.00 2.90
4590 6070 9.745018 ACTTTCTCAATCTCTTCCATTCAATTA 57.255 29.630 0.00 0.00 0.00 1.40
4681 6161 2.107950 TACGATTTTGACTGGGCCAG 57.892 50.000 31.62 31.62 37.52 4.85
4686 6166 0.960364 TTTTGACTGGGCCAGCGATC 60.960 55.000 33.04 22.73 34.37 3.69
4690 6170 1.078143 ACTGGGCCAGCGATCTTTC 60.078 57.895 33.04 0.00 34.37 2.62
4691 6171 1.222936 CTGGGCCAGCGATCTTTCT 59.777 57.895 22.68 0.00 0.00 2.52
4692 6172 0.393537 CTGGGCCAGCGATCTTTCTT 60.394 55.000 22.68 0.00 0.00 2.52
4693 6173 0.677731 TGGGCCAGCGATCTTTCTTG 60.678 55.000 0.00 0.00 0.00 3.02
4694 6174 1.379642 GGGCCAGCGATCTTTCTTGG 61.380 60.000 4.39 0.00 0.00 3.61
4695 6175 1.379642 GGCCAGCGATCTTTCTTGGG 61.380 60.000 0.00 0.00 0.00 4.12
4696 6176 1.379642 GCCAGCGATCTTTCTTGGGG 61.380 60.000 0.00 0.00 0.00 4.96
4697 6177 0.253044 CCAGCGATCTTTCTTGGGGA 59.747 55.000 0.00 0.00 0.00 4.81
4698 6178 1.661341 CAGCGATCTTTCTTGGGGAG 58.339 55.000 0.00 0.00 0.00 4.30
4699 6179 1.208052 CAGCGATCTTTCTTGGGGAGA 59.792 52.381 0.00 0.00 0.00 3.71
4700 6180 1.909302 AGCGATCTTTCTTGGGGAGAA 59.091 47.619 0.00 0.00 42.56 2.87
4708 6188 4.806640 TTTCTTGGGGAGAAATGATTGC 57.193 40.909 0.00 0.00 46.69 3.56
4709 6189 2.738743 TCTTGGGGAGAAATGATTGCC 58.261 47.619 0.00 0.00 0.00 4.52
4710 6190 1.406539 CTTGGGGAGAAATGATTGCCG 59.593 52.381 0.00 0.00 0.00 5.69
4711 6191 0.623194 TGGGGAGAAATGATTGCCGA 59.377 50.000 0.00 0.00 0.00 5.54
4712 6192 1.312815 GGGGAGAAATGATTGCCGAG 58.687 55.000 0.00 0.00 0.00 4.63
4713 6193 1.312815 GGGAGAAATGATTGCCGAGG 58.687 55.000 0.00 0.00 0.00 4.63
4714 6194 1.134098 GGGAGAAATGATTGCCGAGGA 60.134 52.381 0.00 0.00 0.00 3.71
4715 6195 2.216898 GGAGAAATGATTGCCGAGGAG 58.783 52.381 0.00 0.00 0.00 3.69
4716 6196 2.216898 GAGAAATGATTGCCGAGGAGG 58.783 52.381 0.00 0.00 44.97 4.30
4717 6197 1.561542 AGAAATGATTGCCGAGGAGGT 59.438 47.619 0.00 0.00 43.70 3.85
4718 6198 2.025887 AGAAATGATTGCCGAGGAGGTT 60.026 45.455 0.00 0.00 43.70 3.50
4719 6199 1.755179 AATGATTGCCGAGGAGGTTG 58.245 50.000 0.00 0.00 43.70 3.77
4720 6200 0.911769 ATGATTGCCGAGGAGGTTGA 59.088 50.000 0.00 0.00 43.70 3.18
4721 6201 0.690192 TGATTGCCGAGGAGGTTGAA 59.310 50.000 0.00 0.00 43.70 2.69
4722 6202 1.087501 GATTGCCGAGGAGGTTGAAC 58.912 55.000 0.00 0.00 43.70 3.18
4723 6203 0.400213 ATTGCCGAGGAGGTTGAACA 59.600 50.000 0.00 0.00 43.70 3.18
4724 6204 0.250295 TTGCCGAGGAGGTTGAACAG 60.250 55.000 0.00 0.00 43.70 3.16
4725 6205 1.118965 TGCCGAGGAGGTTGAACAGA 61.119 55.000 0.00 0.00 43.70 3.41
4726 6206 0.250513 GCCGAGGAGGTTGAACAGAT 59.749 55.000 0.00 0.00 43.70 2.90
4727 6207 2.009042 GCCGAGGAGGTTGAACAGATG 61.009 57.143 0.00 0.00 43.70 2.90
4728 6208 1.550524 CCGAGGAGGTTGAACAGATGA 59.449 52.381 0.00 0.00 34.51 2.92
4729 6209 2.169352 CCGAGGAGGTTGAACAGATGAT 59.831 50.000 0.00 0.00 34.51 2.45
4730 6210 3.384789 CCGAGGAGGTTGAACAGATGATA 59.615 47.826 0.00 0.00 34.51 2.15
4731 6211 4.141937 CCGAGGAGGTTGAACAGATGATAA 60.142 45.833 0.00 0.00 34.51 1.75
4732 6212 5.453903 CCGAGGAGGTTGAACAGATGATAAT 60.454 44.000 0.00 0.00 34.51 1.28
4733 6213 5.694006 CGAGGAGGTTGAACAGATGATAATC 59.306 44.000 0.00 0.00 0.00 1.75
4734 6214 6.566079 AGGAGGTTGAACAGATGATAATCA 57.434 37.500 0.00 0.00 0.00 2.57
4735 6215 6.590068 AGGAGGTTGAACAGATGATAATCAG 58.410 40.000 0.00 0.00 0.00 2.90
4736 6216 5.762218 GGAGGTTGAACAGATGATAATCAGG 59.238 44.000 0.00 0.00 0.00 3.86
4737 6217 6.319048 AGGTTGAACAGATGATAATCAGGT 57.681 37.500 0.00 0.00 0.00 4.00
4738 6218 6.118170 AGGTTGAACAGATGATAATCAGGTG 58.882 40.000 0.00 0.00 0.00 4.00
4739 6219 5.297776 GGTTGAACAGATGATAATCAGGTGG 59.702 44.000 0.00 0.00 0.00 4.61
4740 6220 5.955961 TGAACAGATGATAATCAGGTGGA 57.044 39.130 0.00 0.00 0.00 4.02
4741 6221 6.312141 TGAACAGATGATAATCAGGTGGAA 57.688 37.500 0.00 0.00 0.00 3.53
4742 6222 6.115446 TGAACAGATGATAATCAGGTGGAAC 58.885 40.000 0.00 0.00 0.00 3.62
4743 6223 5.698741 ACAGATGATAATCAGGTGGAACA 57.301 39.130 0.00 0.00 39.98 3.18
4744 6224 6.257994 ACAGATGATAATCAGGTGGAACAT 57.742 37.500 0.00 0.00 44.52 2.71
4745 6225 7.379059 ACAGATGATAATCAGGTGGAACATA 57.621 36.000 0.00 0.00 44.52 2.29
4746 6226 7.220030 ACAGATGATAATCAGGTGGAACATAC 58.780 38.462 0.00 0.00 44.52 2.39
4747 6227 7.147497 ACAGATGATAATCAGGTGGAACATACA 60.147 37.037 0.00 0.00 44.52 2.29
4748 6228 7.387122 CAGATGATAATCAGGTGGAACATACAG 59.613 40.741 0.00 0.00 44.52 2.74
4749 6229 6.806668 TGATAATCAGGTGGAACATACAGA 57.193 37.500 0.00 0.00 44.52 3.41
4750 6230 6.820335 TGATAATCAGGTGGAACATACAGAG 58.180 40.000 0.00 0.00 44.52 3.35
4751 6231 6.611236 TGATAATCAGGTGGAACATACAGAGA 59.389 38.462 0.00 0.00 44.52 3.10
4752 6232 4.744795 ATCAGGTGGAACATACAGAGAC 57.255 45.455 0.00 0.00 44.52 3.36
4753 6233 2.832129 TCAGGTGGAACATACAGAGACC 59.168 50.000 0.00 0.00 44.52 3.85
4754 6234 1.825474 AGGTGGAACATACAGAGACCG 59.175 52.381 0.00 0.00 44.52 4.79
4755 6235 1.822990 GGTGGAACATACAGAGACCGA 59.177 52.381 0.00 0.00 44.52 4.69
4756 6236 2.431057 GGTGGAACATACAGAGACCGAT 59.569 50.000 0.00 0.00 44.52 4.18
4757 6237 3.635373 GGTGGAACATACAGAGACCGATA 59.365 47.826 0.00 0.00 44.52 2.92
4758 6238 4.281182 GGTGGAACATACAGAGACCGATAT 59.719 45.833 0.00 0.00 44.52 1.63
4759 6239 5.223382 GTGGAACATACAGAGACCGATATG 58.777 45.833 0.00 0.00 44.52 1.78
4760 6240 4.893524 TGGAACATACAGAGACCGATATGT 59.106 41.667 0.00 0.00 39.39 2.29
4761 6241 5.221244 TGGAACATACAGAGACCGATATGTG 60.221 44.000 0.00 0.00 38.09 3.21
4762 6242 5.221263 GGAACATACAGAGACCGATATGTGT 60.221 44.000 0.00 0.00 38.09 3.72
4763 6243 6.016527 GGAACATACAGAGACCGATATGTGTA 60.017 42.308 0.00 0.00 38.09 2.90
4764 6244 6.315091 ACATACAGAGACCGATATGTGTAC 57.685 41.667 0.00 0.00 36.99 2.90
4765 6245 5.241064 ACATACAGAGACCGATATGTGTACC 59.759 44.000 0.00 0.00 36.99 3.34
4766 6246 3.628008 ACAGAGACCGATATGTGTACCA 58.372 45.455 0.00 0.00 0.00 3.25
4767 6247 4.021229 ACAGAGACCGATATGTGTACCAA 58.979 43.478 0.00 0.00 0.00 3.67
4768 6248 4.464951 ACAGAGACCGATATGTGTACCAAA 59.535 41.667 0.00 0.00 0.00 3.28
4769 6249 5.046878 ACAGAGACCGATATGTGTACCAAAA 60.047 40.000 0.00 0.00 0.00 2.44
4770 6250 6.049149 CAGAGACCGATATGTGTACCAAAAT 58.951 40.000 0.00 0.00 0.00 1.82
4771 6251 6.018751 CAGAGACCGATATGTGTACCAAAATG 60.019 42.308 0.00 0.00 0.00 2.32
4772 6252 5.741011 AGACCGATATGTGTACCAAAATGT 58.259 37.500 0.00 0.00 0.00 2.71
4773 6253 6.177610 AGACCGATATGTGTACCAAAATGTT 58.822 36.000 0.00 0.00 0.00 2.71
4774 6254 6.093495 AGACCGATATGTGTACCAAAATGTTG 59.907 38.462 0.00 0.00 34.25 3.33
4790 6270 3.433306 TGTTGGGTAACATCTTGAGGG 57.567 47.619 0.00 0.00 41.66 4.30
4791 6271 2.714250 TGTTGGGTAACATCTTGAGGGT 59.286 45.455 0.00 0.00 41.66 4.34
4792 6272 3.911260 TGTTGGGTAACATCTTGAGGGTA 59.089 43.478 0.00 0.00 41.66 3.69
4793 6273 4.351407 TGTTGGGTAACATCTTGAGGGTAA 59.649 41.667 0.00 0.00 41.66 2.85
4794 6274 4.837093 TGGGTAACATCTTGAGGGTAAG 57.163 45.455 0.00 0.00 39.74 2.34
4795 6275 3.054655 TGGGTAACATCTTGAGGGTAAGC 60.055 47.826 0.00 0.00 39.74 3.09
4796 6276 3.200165 GGGTAACATCTTGAGGGTAAGCT 59.800 47.826 0.00 0.00 39.74 3.74
4797 6277 4.407945 GGGTAACATCTTGAGGGTAAGCTA 59.592 45.833 0.00 0.00 39.74 3.32
4798 6278 5.071923 GGGTAACATCTTGAGGGTAAGCTAT 59.928 44.000 0.00 0.00 39.74 2.97
4799 6279 6.269307 GGGTAACATCTTGAGGGTAAGCTATA 59.731 42.308 0.00 0.00 39.74 1.31
4800 6280 7.038231 GGGTAACATCTTGAGGGTAAGCTATAT 60.038 40.741 0.00 0.00 39.74 0.86
4801 6281 7.819900 GGTAACATCTTGAGGGTAAGCTATATG 59.180 40.741 0.00 0.00 0.00 1.78
4802 6282 7.618019 AACATCTTGAGGGTAAGCTATATGA 57.382 36.000 0.00 0.00 0.00 2.15
4803 6283 7.618019 ACATCTTGAGGGTAAGCTATATGAA 57.382 36.000 0.00 0.00 0.00 2.57
4804 6284 8.212259 ACATCTTGAGGGTAAGCTATATGAAT 57.788 34.615 0.00 0.00 0.00 2.57
4805 6285 8.099537 ACATCTTGAGGGTAAGCTATATGAATG 58.900 37.037 0.00 0.00 0.00 2.67
4806 6286 7.618019 TCTTGAGGGTAAGCTATATGAATGT 57.382 36.000 0.00 0.00 0.00 2.71
4807 6287 8.034313 TCTTGAGGGTAAGCTATATGAATGTT 57.966 34.615 0.00 0.00 0.00 2.71
4808 6288 9.154632 TCTTGAGGGTAAGCTATATGAATGTTA 57.845 33.333 0.00 0.00 0.00 2.41
4809 6289 9.778741 CTTGAGGGTAAGCTATATGAATGTTAA 57.221 33.333 0.00 0.00 0.00 2.01
4811 6291 9.725019 TGAGGGTAAGCTATATGAATGTTAATG 57.275 33.333 0.00 0.00 0.00 1.90
4812 6292 9.944376 GAGGGTAAGCTATATGAATGTTAATGA 57.056 33.333 0.00 0.00 0.00 2.57
4819 6299 9.445878 AGCTATATGAATGTTAATGATGAGGTG 57.554 33.333 0.00 0.00 0.00 4.00
4820 6300 9.224267 GCTATATGAATGTTAATGATGAGGTGT 57.776 33.333 0.00 0.00 0.00 4.16
4822 6302 6.704289 ATGAATGTTAATGATGAGGTGTGG 57.296 37.500 0.00 0.00 0.00 4.17
4823 6303 5.569355 TGAATGTTAATGATGAGGTGTGGT 58.431 37.500 0.00 0.00 0.00 4.16
4824 6304 5.415389 TGAATGTTAATGATGAGGTGTGGTG 59.585 40.000 0.00 0.00 0.00 4.17
4825 6305 3.081061 TGTTAATGATGAGGTGTGGTGC 58.919 45.455 0.00 0.00 0.00 5.01
4826 6306 2.418368 TAATGATGAGGTGTGGTGCC 57.582 50.000 0.00 0.00 0.00 5.01
4827 6307 0.323725 AATGATGAGGTGTGGTGCCC 60.324 55.000 0.00 0.00 0.00 5.36
4828 6308 1.499913 ATGATGAGGTGTGGTGCCCA 61.500 55.000 0.00 0.00 0.00 5.36
4844 6324 6.905736 TGGTGCCCACTATTTTCATATTAGA 58.094 36.000 0.00 0.00 0.00 2.10
4845 6325 7.526041 TGGTGCCCACTATTTTCATATTAGAT 58.474 34.615 0.00 0.00 0.00 1.98
4846 6326 7.448161 TGGTGCCCACTATTTTCATATTAGATG 59.552 37.037 0.00 0.00 0.00 2.90
4847 6327 7.308435 GTGCCCACTATTTTCATATTAGATGC 58.692 38.462 0.00 0.00 0.00 3.91
4848 6328 7.003482 TGCCCACTATTTTCATATTAGATGCA 58.997 34.615 0.00 0.00 0.00 3.96
4849 6329 7.670979 TGCCCACTATTTTCATATTAGATGCAT 59.329 33.333 0.00 0.00 0.00 3.96
4850 6330 8.526147 GCCCACTATTTTCATATTAGATGCATT 58.474 33.333 0.00 0.00 0.00 3.56
4851 6331 9.850628 CCCACTATTTTCATATTAGATGCATTG 57.149 33.333 0.00 0.00 0.00 2.82
4868 6348 9.715121 AGATGCATTGTTTCAATATTCAAGTTT 57.285 25.926 0.00 0.00 0.00 2.66
4869 6349 9.962759 GATGCATTGTTTCAATATTCAAGTTTC 57.037 29.630 0.00 0.00 0.00 2.78
4870 6350 8.309163 TGCATTGTTTCAATATTCAAGTTTCC 57.691 30.769 0.00 0.00 0.00 3.13
4871 6351 7.930325 TGCATTGTTTCAATATTCAAGTTTCCA 59.070 29.630 0.00 0.00 0.00 3.53
4872 6352 8.772705 GCATTGTTTCAATATTCAAGTTTCCAA 58.227 29.630 0.00 0.00 0.00 3.53
4876 6356 9.829507 TGTTTCAATATTCAAGTTTCCAATTGT 57.170 25.926 4.43 0.00 0.00 2.71
4885 6365 9.829507 ATTCAAGTTTCCAATTGTACATTGAAA 57.170 25.926 15.50 11.66 37.58 2.69
4886 6366 9.658799 TTCAAGTTTCCAATTGTACATTGAAAA 57.341 25.926 15.37 8.25 32.82 2.29
4887 6367 9.658799 TCAAGTTTCCAATTGTACATTGAAAAA 57.341 25.926 15.37 12.68 0.00 1.94
4918 6398 8.506168 TCAAGTGTTTGAGATACTTCTGTTTT 57.494 30.769 0.00 0.00 37.58 2.43
4919 6399 8.956426 TCAAGTGTTTGAGATACTTCTGTTTTT 58.044 29.630 0.00 0.00 37.58 1.94
4920 6400 9.226345 CAAGTGTTTGAGATACTTCTGTTTTTC 57.774 33.333 0.00 0.00 37.58 2.29
4921 6401 8.738645 AGTGTTTGAGATACTTCTGTTTTTCT 57.261 30.769 0.00 0.00 30.30 2.52
4922 6402 9.178758 AGTGTTTGAGATACTTCTGTTTTTCTT 57.821 29.630 0.00 0.00 30.30 2.52
4923 6403 9.788960 GTGTTTGAGATACTTCTGTTTTTCTTT 57.211 29.630 0.00 0.00 30.30 2.52
4926 6406 9.716507 TTTGAGATACTTCTGTTTTTCTTTTCG 57.283 29.630 0.00 0.00 30.30 3.46
4927 6407 8.657074 TGAGATACTTCTGTTTTTCTTTTCGA 57.343 30.769 0.00 0.00 30.30 3.71
4928 6408 9.104965 TGAGATACTTCTGTTTTTCTTTTCGAA 57.895 29.630 0.00 0.00 30.30 3.71
4929 6409 9.931210 GAGATACTTCTGTTTTTCTTTTCGAAA 57.069 29.630 6.47 6.47 34.44 3.46
4941 6421 8.810652 TTTTCTTTTCGAAAACCATCATAAGG 57.189 30.769 19.08 6.10 44.42 2.69
4942 6422 7.519032 TTCTTTTCGAAAACCATCATAAGGT 57.481 32.000 19.08 0.00 42.34 3.50
4955 6435 9.927081 AACCATCATAAGGTTCTAATCTCATTT 57.073 29.630 0.00 0.00 45.98 2.32
4956 6436 9.927081 ACCATCATAAGGTTCTAATCTCATTTT 57.073 29.630 0.00 0.00 35.33 1.82
4984 6464 8.879342 AGTTGTCTATGAAGTATGAAGTATGC 57.121 34.615 0.00 0.00 0.00 3.14
4985 6465 8.478066 AGTTGTCTATGAAGTATGAAGTATGCA 58.522 33.333 0.00 0.00 0.00 3.96
4986 6466 9.265901 GTTGTCTATGAAGTATGAAGTATGCAT 57.734 33.333 3.79 3.79 38.50 3.96
4987 6467 9.836864 TTGTCTATGAAGTATGAAGTATGCATT 57.163 29.630 3.54 0.00 34.81 3.56
4993 6473 9.851686 ATGAAGTATGAAGTATGCATTAGGAAA 57.148 29.630 3.54 0.00 34.81 3.13
4994 6474 9.679661 TGAAGTATGAAGTATGCATTAGGAAAA 57.320 29.630 3.54 0.00 34.81 2.29
5029 6509 9.944376 ATAATTAGTGGCTATGTATTTCGTCAT 57.056 29.630 0.00 0.00 0.00 3.06
5030 6510 8.677148 AATTAGTGGCTATGTATTTCGTCATT 57.323 30.769 0.00 0.00 0.00 2.57
5031 6511 8.677148 ATTAGTGGCTATGTATTTCGTCATTT 57.323 30.769 0.00 0.00 0.00 2.32
5032 6512 6.604735 AGTGGCTATGTATTTCGTCATTTC 57.395 37.500 0.00 0.00 0.00 2.17
5033 6513 5.234329 AGTGGCTATGTATTTCGTCATTTCG 59.766 40.000 0.00 0.00 0.00 3.46
5034 6514 5.006358 GTGGCTATGTATTTCGTCATTTCGT 59.994 40.000 0.00 0.00 0.00 3.85
5035 6515 5.006261 TGGCTATGTATTTCGTCATTTCGTG 59.994 40.000 0.00 0.00 0.00 4.35
5036 6516 5.432157 GCTATGTATTTCGTCATTTCGTGG 58.568 41.667 0.00 0.00 0.00 4.94
5037 6517 4.875544 ATGTATTTCGTCATTTCGTGGG 57.124 40.909 0.00 0.00 0.00 4.61
5038 6518 3.927854 TGTATTTCGTCATTTCGTGGGA 58.072 40.909 0.00 0.00 0.00 4.37
5039 6519 3.930229 TGTATTTCGTCATTTCGTGGGAG 59.070 43.478 0.00 0.00 0.00 4.30
5040 6520 1.803334 TTTCGTCATTTCGTGGGAGG 58.197 50.000 0.00 0.00 0.00 4.30
5041 6521 0.672401 TTCGTCATTTCGTGGGAGGC 60.672 55.000 0.00 0.00 0.00 4.70
5042 6522 1.375396 CGTCATTTCGTGGGAGGCA 60.375 57.895 0.00 0.00 0.00 4.75
5043 6523 0.744414 CGTCATTTCGTGGGAGGCAT 60.744 55.000 0.00 0.00 0.00 4.40
5044 6524 0.734889 GTCATTTCGTGGGAGGCATG 59.265 55.000 0.00 0.00 0.00 4.06
5045 6525 0.327924 TCATTTCGTGGGAGGCATGT 59.672 50.000 0.00 0.00 0.00 3.21
5046 6526 1.176527 CATTTCGTGGGAGGCATGTT 58.823 50.000 0.00 0.00 0.00 2.71
5047 6527 2.026729 TCATTTCGTGGGAGGCATGTTA 60.027 45.455 0.00 0.00 0.00 2.41
5048 6528 2.570415 TTTCGTGGGAGGCATGTTAA 57.430 45.000 0.00 0.00 0.00 2.01
5049 6529 1.816074 TTCGTGGGAGGCATGTTAAC 58.184 50.000 0.00 0.00 0.00 2.01
5050 6530 0.687920 TCGTGGGAGGCATGTTAACA 59.312 50.000 11.41 11.41 0.00 2.41
5051 6531 1.072489 TCGTGGGAGGCATGTTAACAA 59.928 47.619 13.23 0.00 0.00 2.83
5052 6532 2.091541 CGTGGGAGGCATGTTAACAAT 58.908 47.619 13.23 0.00 0.00 2.71
5053 6533 2.097466 CGTGGGAGGCATGTTAACAATC 59.903 50.000 13.23 7.12 0.00 2.67
5054 6534 3.356290 GTGGGAGGCATGTTAACAATCT 58.644 45.455 13.23 10.07 0.00 2.40
5055 6535 3.763897 GTGGGAGGCATGTTAACAATCTT 59.236 43.478 13.23 3.64 0.00 2.40
5056 6536 4.947388 GTGGGAGGCATGTTAACAATCTTA 59.053 41.667 13.23 0.66 0.00 2.10
5057 6537 5.594317 GTGGGAGGCATGTTAACAATCTTAT 59.406 40.000 13.23 0.00 0.00 1.73
5058 6538 5.593909 TGGGAGGCATGTTAACAATCTTATG 59.406 40.000 13.23 6.33 0.00 1.90
5059 6539 5.594317 GGGAGGCATGTTAACAATCTTATGT 59.406 40.000 13.23 0.00 34.24 2.29
5060 6540 6.096846 GGGAGGCATGTTAACAATCTTATGTT 59.903 38.462 13.23 0.00 45.14 2.71
5061 6541 6.974622 GGAGGCATGTTAACAATCTTATGTTG 59.025 38.462 13.23 4.10 43.13 3.33
5062 6542 7.362920 GGAGGCATGTTAACAATCTTATGTTGT 60.363 37.037 13.23 0.00 43.13 3.32
5063 6543 7.538575 AGGCATGTTAACAATCTTATGTTGTC 58.461 34.615 13.23 4.50 43.13 3.18
5064 6544 7.394359 AGGCATGTTAACAATCTTATGTTGTCT 59.606 33.333 13.23 6.86 43.13 3.41
5065 6545 8.028938 GGCATGTTAACAATCTTATGTTGTCTT 58.971 33.333 13.23 0.00 43.13 3.01
5124 6604 7.712204 TCTTGAAAGTTTCCTACCAAAAACT 57.288 32.000 13.01 0.00 45.21 2.66
5155 6635 7.962964 TTTCCTAATTGTACTCAAGTCTGTG 57.037 36.000 0.00 0.00 36.97 3.66
5156 6636 5.479306 TCCTAATTGTACTCAAGTCTGTGC 58.521 41.667 0.00 0.00 36.97 4.57
5157 6637 4.327357 CCTAATTGTACTCAAGTCTGTGCG 59.673 45.833 0.00 0.00 36.97 5.34
5158 6638 2.148916 TTGTACTCAAGTCTGTGCGG 57.851 50.000 0.00 0.00 0.00 5.69
5159 6639 0.317160 TGTACTCAAGTCTGTGCGGG 59.683 55.000 0.00 0.00 0.00 6.13
5160 6640 0.317479 GTACTCAAGTCTGTGCGGGT 59.683 55.000 0.00 0.00 0.00 5.28
5161 6641 1.045407 TACTCAAGTCTGTGCGGGTT 58.955 50.000 0.00 0.00 0.00 4.11
5162 6642 0.180406 ACTCAAGTCTGTGCGGGTTT 59.820 50.000 0.00 0.00 0.00 3.27
5163 6643 1.414919 ACTCAAGTCTGTGCGGGTTTA 59.585 47.619 0.00 0.00 0.00 2.01
5164 6644 2.038557 ACTCAAGTCTGTGCGGGTTTAT 59.961 45.455 0.00 0.00 0.00 1.40
5165 6645 3.259876 ACTCAAGTCTGTGCGGGTTTATA 59.740 43.478 0.00 0.00 0.00 0.98
5166 6646 4.081087 ACTCAAGTCTGTGCGGGTTTATAT 60.081 41.667 0.00 0.00 0.00 0.86
5167 6647 4.839121 TCAAGTCTGTGCGGGTTTATATT 58.161 39.130 0.00 0.00 0.00 1.28
5168 6648 5.250200 TCAAGTCTGTGCGGGTTTATATTT 58.750 37.500 0.00 0.00 0.00 1.40
5169 6649 5.708230 TCAAGTCTGTGCGGGTTTATATTTT 59.292 36.000 0.00 0.00 0.00 1.82
5170 6650 6.207810 TCAAGTCTGTGCGGGTTTATATTTTT 59.792 34.615 0.00 0.00 0.00 1.94
5171 6651 5.949735 AGTCTGTGCGGGTTTATATTTTTG 58.050 37.500 0.00 0.00 0.00 2.44
5172 6652 5.475564 AGTCTGTGCGGGTTTATATTTTTGT 59.524 36.000 0.00 0.00 0.00 2.83
5173 6653 6.015772 AGTCTGTGCGGGTTTATATTTTTGTT 60.016 34.615 0.00 0.00 0.00 2.83
5174 6654 6.643360 GTCTGTGCGGGTTTATATTTTTGTTT 59.357 34.615 0.00 0.00 0.00 2.83
5175 6655 6.864165 TCTGTGCGGGTTTATATTTTTGTTTC 59.136 34.615 0.00 0.00 0.00 2.78
5176 6656 6.750148 TGTGCGGGTTTATATTTTTGTTTCT 58.250 32.000 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.609299 TCGCCCTCCCCAACATCA 60.609 61.111 0.00 0.00 0.00 3.07
95 96 2.187424 GGCGTTGGTGGCCGTATA 59.813 61.111 0.00 0.00 41.39 1.47
149 150 0.455410 CGCTCCTCCTCTCTTGAGTG 59.545 60.000 0.00 0.00 38.61 3.51
223 224 0.888619 TCTCGGCGTCAAGATCAAGT 59.111 50.000 6.85 0.00 0.00 3.16
324 325 2.346766 TGCAAGAGCCACTTCTTTCA 57.653 45.000 0.00 0.00 41.13 2.69
525 527 0.250124 TTGAGTTCGACCACGCCATT 60.250 50.000 0.00 0.00 39.58 3.16
595 598 2.642427 ACAACACAGTTCATGCTGACA 58.358 42.857 7.27 0.00 39.62 3.58
612 615 1.327303 ATGCCGGCTTCAGAAAACAA 58.673 45.000 29.70 1.81 0.00 2.83
678 681 1.338107 AAGATCCGTGGCCGATCATA 58.662 50.000 18.02 0.00 35.63 2.15
717 720 2.754552 CACCAATCCATTTCATGTCCGT 59.245 45.455 0.00 0.00 0.00 4.69
732 735 1.000385 CAATGCGTCCAACACACCAAT 60.000 47.619 0.00 0.00 0.00 3.16
734 737 2.028936 CAATGCGTCCAACACACCA 58.971 52.632 0.00 0.00 0.00 4.17
737 740 2.902419 CGGCAATGCGTCCAACACA 61.902 57.895 0.00 0.00 0.00 3.72
739 742 1.240641 AATCGGCAATGCGTCCAACA 61.241 50.000 0.00 0.00 0.00 3.33
745 748 1.202114 ACATTTGAATCGGCAATGCGT 59.798 42.857 0.00 0.00 0.00 5.24
758 761 6.466413 CGTTGTTCGTTCAGTTTTACATTTGA 59.534 34.615 0.00 0.00 34.52 2.69
796 799 5.369833 TGTCCACTTTTTATCCGTTTGAGA 58.630 37.500 0.00 0.00 0.00 3.27
798 801 6.452494 TTTGTCCACTTTTTATCCGTTTGA 57.548 33.333 0.00 0.00 0.00 2.69
850 853 5.232202 CGATCGCTTCATTTAAGAGCAACTA 59.768 40.000 0.26 0.00 37.38 2.24
1852 1911 6.209192 TGCAAAACACAGAGGTTGATAATCAT 59.791 34.615 0.00 0.00 0.00 2.45
1866 1932 7.191551 CACCTAGATATCATTGCAAAACACAG 58.808 38.462 1.71 0.00 0.00 3.66
1868 1934 6.498304 CCACCTAGATATCATTGCAAAACAC 58.502 40.000 1.71 0.00 0.00 3.32
1919 1986 1.528586 GACATGATCGAAATGGAGCCG 59.471 52.381 14.02 0.00 0.00 5.52
2078 2209 9.559732 TTTGGACATTTCTGTATAGGATACATG 57.440 33.333 0.00 0.00 35.14 3.21
2091 2222 9.490663 GAATATAAGACGTTTTGGACATTTCTG 57.509 33.333 0.83 0.00 0.00 3.02
2109 2240 9.286946 AGTTTTTCTCACGTCGTAGAATATAAG 57.713 33.333 14.06 0.00 39.69 1.73
2155 2301 2.838637 ACCAAAACCCAAGACTTCCA 57.161 45.000 0.00 0.00 0.00 3.53
2213 2999 7.972832 AAAGTGTGATCGACCAACTAATTAA 57.027 32.000 0.00 0.00 0.00 1.40
2214 3000 7.572353 GCAAAAGTGTGATCGACCAACTAATTA 60.572 37.037 0.00 0.00 0.00 1.40
2215 3001 6.668323 CAAAAGTGTGATCGACCAACTAATT 58.332 36.000 0.00 0.00 0.00 1.40
2216 3002 5.334879 GCAAAAGTGTGATCGACCAACTAAT 60.335 40.000 0.00 0.00 0.00 1.73
2300 3088 4.992381 AGCGTGACAAGTTTAGCTAAAG 57.008 40.909 19.16 10.37 32.73 1.85
2363 3153 2.868253 GGCACGATTTGGCCTAAGT 58.132 52.632 3.32 0.00 46.74 2.24
2375 3165 1.202200 CGTTTTGGTTTTCAGGCACGA 60.202 47.619 0.00 0.00 0.00 4.35
2530 3320 7.117956 GGACCAGAATTTAAGTAACAGACAGTC 59.882 40.741 0.00 0.00 0.00 3.51
2534 3324 7.981102 AAGGACCAGAATTTAAGTAACAGAC 57.019 36.000 0.00 0.00 0.00 3.51
2535 3325 8.990163 AAAAGGACCAGAATTTAAGTAACAGA 57.010 30.769 0.00 0.00 0.00 3.41
2630 3531 7.121168 CAGTAGGGATTCTGCTAACATTTTTCA 59.879 37.037 0.00 0.00 36.25 2.69
2668 3569 4.759205 CTTTTGGGGGAGGGCGGG 62.759 72.222 0.00 0.00 0.00 6.13
2672 3573 0.762461 TTTGCACTTTTGGGGGAGGG 60.762 55.000 0.00 0.00 0.00 4.30
2674 3575 1.118838 TGTTTGCACTTTTGGGGGAG 58.881 50.000 0.00 0.00 0.00 4.30
2676 3577 2.636647 ATTGTTTGCACTTTTGGGGG 57.363 45.000 0.00 0.00 0.00 5.40
2678 3579 5.799435 GTCAAAAATTGTTTGCACTTTTGGG 59.201 36.000 0.00 3.45 37.48 4.12
2680 3581 9.212687 CATAGTCAAAAATTGTTTGCACTTTTG 57.787 29.630 8.65 0.00 37.48 2.44
2681 3582 8.945057 ACATAGTCAAAAATTGTTTGCACTTTT 58.055 25.926 8.65 0.00 38.54 2.27
2682 3583 8.491331 ACATAGTCAAAAATTGTTTGCACTTT 57.509 26.923 8.65 1.91 0.00 2.66
2749 3843 2.668457 CGATGTGGTGCTCTAAAGTCAC 59.332 50.000 0.00 0.00 0.00 3.67
2795 3890 4.811969 TTACCGCATCACTAAAAGGAGA 57.188 40.909 0.00 0.00 0.00 3.71
2833 3928 1.827969 CCTCTGAGGAAGTAGGTGTGG 59.172 57.143 19.13 0.00 37.67 4.17
2869 3964 4.787260 GGAAGACTTCCTCTCGTAGTTT 57.213 45.455 24.55 0.00 46.57 2.66
2942 4037 9.617523 TCATCATTTGCTTGATTGATCTAGTAA 57.382 29.630 0.00 2.90 34.09 2.24
2943 4038 9.788889 ATCATCATTTGCTTGATTGATCTAGTA 57.211 29.630 0.00 0.00 34.09 1.82
2944 4039 8.693120 ATCATCATTTGCTTGATTGATCTAGT 57.307 30.769 0.00 0.00 34.09 2.57
2946 4041 9.127277 TGAATCATCATTTGCTTGATTGATCTA 57.873 29.630 11.06 0.00 39.52 1.98
2947 4042 8.007405 TGAATCATCATTTGCTTGATTGATCT 57.993 30.769 11.06 0.00 39.52 2.75
3008 4103 7.971168 CGGAAATACATGGTTGTAAGCATTAAA 59.029 33.333 6.57 0.00 44.02 1.52
3032 4127 3.820557 AGATCATATTTGGTCCCAACGG 58.179 45.455 0.00 0.00 33.08 4.44
3077 4172 4.143333 TCTAGAACCTGGCGCCGC 62.143 66.667 23.90 0.00 0.00 6.53
3078 4173 2.105128 CTCTAGAACCTGGCGCCG 59.895 66.667 23.90 16.52 0.00 6.46
3079 4174 2.501610 CCTCTAGAACCTGGCGCC 59.498 66.667 22.73 22.73 0.00 6.53
3080 4175 2.359967 ACCCTCTAGAACCTGGCGC 61.360 63.158 0.00 0.00 0.00 6.53
3081 4176 1.517832 CACCCTCTAGAACCTGGCG 59.482 63.158 0.00 0.00 0.00 5.69
3082 4177 1.627297 CCCACCCTCTAGAACCTGGC 61.627 65.000 0.00 0.00 0.00 4.85
3083 4178 0.252742 ACCCACCCTCTAGAACCTGG 60.253 60.000 0.00 0.00 0.00 4.45
3084 4179 2.544844 TACCCACCCTCTAGAACCTG 57.455 55.000 0.00 0.00 0.00 4.00
3085 4180 3.013648 TGAATACCCACCCTCTAGAACCT 59.986 47.826 0.00 0.00 0.00 3.50
3086 4181 3.381335 TGAATACCCACCCTCTAGAACC 58.619 50.000 0.00 0.00 0.00 3.62
3087 4182 5.632034 AATGAATACCCACCCTCTAGAAC 57.368 43.478 0.00 0.00 0.00 3.01
3088 4183 6.423182 CAAAATGAATACCCACCCTCTAGAA 58.577 40.000 0.00 0.00 0.00 2.10
3089 4184 5.104109 CCAAAATGAATACCCACCCTCTAGA 60.104 44.000 0.00 0.00 0.00 2.43
3090 4185 5.104109 TCCAAAATGAATACCCACCCTCTAG 60.104 44.000 0.00 0.00 0.00 2.43
3091 4186 4.791334 TCCAAAATGAATACCCACCCTCTA 59.209 41.667 0.00 0.00 0.00 2.43
3092 4187 3.596046 TCCAAAATGAATACCCACCCTCT 59.404 43.478 0.00 0.00 0.00 3.69
3093 4188 3.954258 CTCCAAAATGAATACCCACCCTC 59.046 47.826 0.00 0.00 0.00 4.30
3094 4189 3.309848 CCTCCAAAATGAATACCCACCCT 60.310 47.826 0.00 0.00 0.00 4.34
3095 4190 3.031013 CCTCCAAAATGAATACCCACCC 58.969 50.000 0.00 0.00 0.00 4.61
3096 4191 3.954258 CTCCTCCAAAATGAATACCCACC 59.046 47.826 0.00 0.00 0.00 4.61
3097 4192 3.954258 CCTCCTCCAAAATGAATACCCAC 59.046 47.826 0.00 0.00 0.00 4.61
3098 4193 3.052944 CCCTCCTCCAAAATGAATACCCA 60.053 47.826 0.00 0.00 0.00 4.51
3099 4194 3.052869 ACCCTCCTCCAAAATGAATACCC 60.053 47.826 0.00 0.00 0.00 3.69
3100 4195 4.251103 ACCCTCCTCCAAAATGAATACC 57.749 45.455 0.00 0.00 0.00 2.73
3101 4196 7.060421 TGAATACCCTCCTCCAAAATGAATAC 58.940 38.462 0.00 0.00 0.00 1.89
3102 4197 7.219601 TGAATACCCTCCTCCAAAATGAATA 57.780 36.000 0.00 0.00 0.00 1.75
3103 4198 6.091076 TGAATACCCTCCTCCAAAATGAAT 57.909 37.500 0.00 0.00 0.00 2.57
3104 4199 5.528600 TGAATACCCTCCTCCAAAATGAA 57.471 39.130 0.00 0.00 0.00 2.57
3105 4200 5.732331 ATGAATACCCTCCTCCAAAATGA 57.268 39.130 0.00 0.00 0.00 2.57
3106 4201 6.796785 AAATGAATACCCTCCTCCAAAATG 57.203 37.500 0.00 0.00 0.00 2.32
3107 4202 6.352137 GCAAAATGAATACCCTCCTCCAAAAT 60.352 38.462 0.00 0.00 0.00 1.82
3108 4203 5.046663 GCAAAATGAATACCCTCCTCCAAAA 60.047 40.000 0.00 0.00 0.00 2.44
3109 4204 4.466015 GCAAAATGAATACCCTCCTCCAAA 59.534 41.667 0.00 0.00 0.00 3.28
3110 4205 4.023291 GCAAAATGAATACCCTCCTCCAA 58.977 43.478 0.00 0.00 0.00 3.53
3111 4206 3.627237 GGCAAAATGAATACCCTCCTCCA 60.627 47.826 0.00 0.00 0.00 3.86
3112 4207 2.959030 GGCAAAATGAATACCCTCCTCC 59.041 50.000 0.00 0.00 0.00 4.30
3113 4208 2.959030 GGGCAAAATGAATACCCTCCTC 59.041 50.000 0.00 0.00 37.59 3.71
3114 4209 2.314549 TGGGCAAAATGAATACCCTCCT 59.685 45.455 0.00 0.00 41.44 3.69
3115 4210 2.745968 TGGGCAAAATGAATACCCTCC 58.254 47.619 0.00 0.00 41.44 4.30
3116 4211 4.817318 TTTGGGCAAAATGAATACCCTC 57.183 40.909 0.00 0.00 41.44 4.30
3117 4212 4.782156 TGATTTGGGCAAAATGAATACCCT 59.218 37.500 4.15 0.00 38.64 4.34
3118 4213 5.096443 TGATTTGGGCAAAATGAATACCC 57.904 39.130 4.15 0.00 38.64 3.69
3119 4214 6.258507 GTGATGATTTGGGCAAAATGAATACC 59.741 38.462 4.15 0.00 38.64 2.73
3120 4215 7.010738 CAGTGATGATTTGGGCAAAATGAATAC 59.989 37.037 4.15 0.60 38.64 1.89
3121 4216 7.042950 CAGTGATGATTTGGGCAAAATGAATA 58.957 34.615 4.15 0.00 38.64 1.75
3122 4217 5.878116 CAGTGATGATTTGGGCAAAATGAAT 59.122 36.000 4.15 0.00 38.64 2.57
3123 4218 5.221682 ACAGTGATGATTTGGGCAAAATGAA 60.222 36.000 4.15 0.00 38.64 2.57
3124 4219 4.283978 ACAGTGATGATTTGGGCAAAATGA 59.716 37.500 4.15 0.00 38.64 2.57
3125 4220 4.571919 ACAGTGATGATTTGGGCAAAATG 58.428 39.130 4.15 0.00 38.64 2.32
3126 4221 4.895668 ACAGTGATGATTTGGGCAAAAT 57.104 36.364 0.00 0.00 41.33 1.82
3127 4222 4.686191 AACAGTGATGATTTGGGCAAAA 57.314 36.364 0.00 0.00 33.56 2.44
3128 4223 4.686191 AAACAGTGATGATTTGGGCAAA 57.314 36.364 0.00 0.00 34.46 3.68
3129 4224 4.378774 CAAAACAGTGATGATTTGGGCAA 58.621 39.130 0.00 0.00 30.95 4.52
3130 4225 3.803021 GCAAAACAGTGATGATTTGGGCA 60.803 43.478 11.36 0.00 33.84 5.36
3131 4226 2.738314 GCAAAACAGTGATGATTTGGGC 59.262 45.455 11.36 0.00 33.84 5.36
3132 4227 3.992643 TGCAAAACAGTGATGATTTGGG 58.007 40.909 11.36 0.00 33.84 4.12
3133 4228 5.987777 TTTGCAAAACAGTGATGATTTGG 57.012 34.783 10.02 0.00 33.84 3.28
3181 4276 7.229106 CCCAAGATTTTGACAAACCATTGAAAT 59.771 33.333 14.97 0.21 39.91 2.17
3188 4283 6.325028 TGAATACCCAAGATTTTGACAAACCA 59.675 34.615 0.00 0.00 36.36 3.67
3193 4288 5.048364 CGGTTGAATACCCAAGATTTTGACA 60.048 40.000 0.00 0.00 44.70 3.58
3194 4289 5.182380 TCGGTTGAATACCCAAGATTTTGAC 59.818 40.000 0.00 0.00 44.70 3.18
3195 4290 5.317808 TCGGTTGAATACCCAAGATTTTGA 58.682 37.500 0.00 0.00 44.70 2.69
3196 4291 5.637006 TCGGTTGAATACCCAAGATTTTG 57.363 39.130 0.00 0.00 44.70 2.44
3197 4292 6.850752 ATTCGGTTGAATACCCAAGATTTT 57.149 33.333 0.00 0.00 44.70 1.82
3209 4304 5.047590 GGTCTTTTTGGGTATTCGGTTGAAT 60.048 40.000 0.00 0.00 46.41 2.57
3212 4307 3.057104 GGGTCTTTTTGGGTATTCGGTTG 60.057 47.826 0.00 0.00 0.00 3.77
3215 4310 2.797786 TGGGTCTTTTTGGGTATTCGG 58.202 47.619 0.00 0.00 0.00 4.30
3216 4311 3.130340 CCATGGGTCTTTTTGGGTATTCG 59.870 47.826 2.85 0.00 0.00 3.34
3217 4312 3.118775 GCCATGGGTCTTTTTGGGTATTC 60.119 47.826 15.13 0.00 0.00 1.75
3218 4313 2.837591 GCCATGGGTCTTTTTGGGTATT 59.162 45.455 15.13 0.00 0.00 1.89
3219 4314 2.466846 GCCATGGGTCTTTTTGGGTAT 58.533 47.619 15.13 0.00 0.00 2.73
3220 4315 1.888826 CGCCATGGGTCTTTTTGGGTA 60.889 52.381 15.13 0.00 0.00 3.69
3221 4316 1.184970 CGCCATGGGTCTTTTTGGGT 61.185 55.000 15.13 0.00 0.00 4.51
3223 4318 1.079888 GCGCCATGGGTCTTTTTGG 60.080 57.895 15.13 0.00 0.00 3.28
3224 4319 1.079888 GGCGCCATGGGTCTTTTTG 60.080 57.895 24.80 0.00 0.00 2.44
3240 4335 4.785453 CTTCCAGTCAGGGGCGGC 62.785 72.222 0.00 0.00 38.24 6.53
3241 4336 3.316573 GACTTCCAGTCAGGGGCGG 62.317 68.421 0.00 0.00 44.45 6.13
3242 4337 2.266055 GACTTCCAGTCAGGGGCG 59.734 66.667 0.00 0.00 44.45 6.13
3250 4345 0.898320 CTCGATGGGTGACTTCCAGT 59.102 55.000 0.00 0.00 37.75 4.00
3252 4347 1.482182 CATCTCGATGGGTGACTTCCA 59.518 52.381 0.00 0.00 38.82 3.53
3253 4348 1.482593 ACATCTCGATGGGTGACTTCC 59.517 52.381 11.25 0.00 42.91 3.46
3322 4417 1.066645 TCTTGATGCATGACTCGTGCT 60.067 47.619 21.26 9.21 45.53 4.40
3332 4427 2.684881 GGTCAACCGATTCTTGATGCAT 59.315 45.455 0.00 0.00 30.46 3.96
3404 4499 7.702348 TGTCGCCGAAATGAATATATCTAGATG 59.298 37.037 15.79 0.00 0.00 2.90
3405 4500 7.772166 TGTCGCCGAAATGAATATATCTAGAT 58.228 34.615 10.73 10.73 0.00 1.98
3459 4790 2.079158 CCCACTATTGTGTGTGCTCAG 58.921 52.381 6.55 0.00 42.34 3.35
3545 4987 5.748630 TCACGATCAATCAGTTAATTCCTCG 59.251 40.000 0.00 0.00 0.00 4.63
3584 5026 3.053831 ACAAGCCTACAATACAAGCGT 57.946 42.857 0.00 0.00 0.00 5.07
3587 5029 5.220662 CCGATGAACAAGCCTACAATACAAG 60.221 44.000 0.00 0.00 0.00 3.16
3786 5228 8.547967 AACGATATTAACATCAGTTGTGAACT 57.452 30.769 0.00 0.00 44.06 3.01
3788 5230 9.820229 GAAAACGATATTAACATCAGTTGTGAA 57.180 29.630 5.24 0.00 38.99 3.18
3904 5349 3.849645 GCGCAAAGATAAATGTCCCGATG 60.850 47.826 0.30 0.00 0.00 3.84
4085 5538 6.036408 CACCCTGCAAAAAGAAAAAGAAGAAG 59.964 38.462 0.00 0.00 0.00 2.85
4091 5544 6.515832 ACTATCACCCTGCAAAAAGAAAAAG 58.484 36.000 0.00 0.00 0.00 2.27
4206 5660 8.792633 CACATACATATATAACAAACCCCCAAG 58.207 37.037 0.00 0.00 0.00 3.61
4221 5675 7.962441 ACATCTTGTAGGCACACATACATATA 58.038 34.615 0.00 0.00 33.30 0.86
4222 5676 6.830912 ACATCTTGTAGGCACACATACATAT 58.169 36.000 0.00 0.00 33.30 1.78
4223 5677 6.233905 ACATCTTGTAGGCACACATACATA 57.766 37.500 0.00 0.00 33.30 2.29
4224 5678 5.102953 ACATCTTGTAGGCACACATACAT 57.897 39.130 0.00 0.00 33.30 2.29
4301 5761 5.857471 CCATGATGGCATTTCCTAAAGAA 57.143 39.130 0.00 0.00 35.26 2.52
4374 5834 4.284490 ACCTCAACTGAATGAGCTTAGTGA 59.716 41.667 8.89 0.00 44.43 3.41
4390 5870 7.339482 ACCCAATTCTAATTAGAGACCTCAAC 58.661 38.462 14.63 0.00 33.21 3.18
4429 5909 3.057596 GCATTGAGAAATTGTTGACCCGA 60.058 43.478 0.00 0.00 0.00 5.14
4449 5929 8.535335 AGTATAAAAGAATTGAGTGAGAGAGCA 58.465 33.333 0.00 0.00 0.00 4.26
4537 6017 3.074242 ACCCGGTTAAAATAGGTTGACCA 59.926 43.478 0.00 0.00 38.89 4.02
4552 6032 1.210967 TGAGAAAGTGTTGACCCGGTT 59.789 47.619 0.00 0.00 0.00 4.44
4681 6161 2.403252 TTCTCCCCAAGAAAGATCGC 57.597 50.000 0.00 0.00 41.10 4.58
4690 6170 1.406539 CGGCAATCATTTCTCCCCAAG 59.593 52.381 0.00 0.00 0.00 3.61
4691 6171 1.005332 TCGGCAATCATTTCTCCCCAA 59.995 47.619 0.00 0.00 0.00 4.12
4692 6172 0.623194 TCGGCAATCATTTCTCCCCA 59.377 50.000 0.00 0.00 0.00 4.96
4693 6173 1.312815 CTCGGCAATCATTTCTCCCC 58.687 55.000 0.00 0.00 0.00 4.81
4694 6174 1.134098 TCCTCGGCAATCATTTCTCCC 60.134 52.381 0.00 0.00 0.00 4.30
4695 6175 2.216898 CTCCTCGGCAATCATTTCTCC 58.783 52.381 0.00 0.00 0.00 3.71
4696 6176 2.216898 CCTCCTCGGCAATCATTTCTC 58.783 52.381 0.00 0.00 0.00 2.87
4697 6177 1.561542 ACCTCCTCGGCAATCATTTCT 59.438 47.619 0.00 0.00 35.61 2.52
4698 6178 2.044123 ACCTCCTCGGCAATCATTTC 57.956 50.000 0.00 0.00 35.61 2.17
4699 6179 2.094675 CAACCTCCTCGGCAATCATTT 58.905 47.619 0.00 0.00 35.61 2.32
4700 6180 1.281867 TCAACCTCCTCGGCAATCATT 59.718 47.619 0.00 0.00 35.61 2.57
4701 6181 0.911769 TCAACCTCCTCGGCAATCAT 59.088 50.000 0.00 0.00 35.61 2.45
4702 6182 0.690192 TTCAACCTCCTCGGCAATCA 59.310 50.000 0.00 0.00 35.61 2.57
4703 6183 1.087501 GTTCAACCTCCTCGGCAATC 58.912 55.000 0.00 0.00 35.61 2.67
4704 6184 0.400213 TGTTCAACCTCCTCGGCAAT 59.600 50.000 0.00 0.00 35.61 3.56
4705 6185 0.250295 CTGTTCAACCTCCTCGGCAA 60.250 55.000 0.00 0.00 35.61 4.52
4706 6186 1.118965 TCTGTTCAACCTCCTCGGCA 61.119 55.000 0.00 0.00 35.61 5.69
4707 6187 0.250513 ATCTGTTCAACCTCCTCGGC 59.749 55.000 0.00 0.00 35.61 5.54
4708 6188 1.550524 TCATCTGTTCAACCTCCTCGG 59.449 52.381 0.00 0.00 39.35 4.63
4709 6189 3.533606 ATCATCTGTTCAACCTCCTCG 57.466 47.619 0.00 0.00 0.00 4.63
4710 6190 6.586344 TGATTATCATCTGTTCAACCTCCTC 58.414 40.000 0.00 0.00 0.00 3.71
4711 6191 6.409005 CCTGATTATCATCTGTTCAACCTCCT 60.409 42.308 0.00 0.00 0.00 3.69
4712 6192 5.762218 CCTGATTATCATCTGTTCAACCTCC 59.238 44.000 0.00 0.00 0.00 4.30
4713 6193 6.259608 CACCTGATTATCATCTGTTCAACCTC 59.740 42.308 0.00 0.00 0.00 3.85
4714 6194 6.118170 CACCTGATTATCATCTGTTCAACCT 58.882 40.000 0.00 0.00 0.00 3.50
4715 6195 5.297776 CCACCTGATTATCATCTGTTCAACC 59.702 44.000 0.00 0.00 0.00 3.77
4716 6196 6.115446 TCCACCTGATTATCATCTGTTCAAC 58.885 40.000 0.00 0.00 0.00 3.18
4717 6197 6.312141 TCCACCTGATTATCATCTGTTCAA 57.688 37.500 0.00 0.00 0.00 2.69
4718 6198 5.955961 TCCACCTGATTATCATCTGTTCA 57.044 39.130 0.00 0.00 0.00 3.18
4719 6199 6.115446 TGTTCCACCTGATTATCATCTGTTC 58.885 40.000 0.00 0.00 0.00 3.18
4720 6200 6.065976 TGTTCCACCTGATTATCATCTGTT 57.934 37.500 0.00 0.00 0.00 3.16
4721 6201 5.698741 TGTTCCACCTGATTATCATCTGT 57.301 39.130 0.00 0.00 0.00 3.41
4722 6202 7.219322 TGTATGTTCCACCTGATTATCATCTG 58.781 38.462 0.00 0.00 0.00 2.90
4723 6203 7.290948 TCTGTATGTTCCACCTGATTATCATCT 59.709 37.037 0.00 0.00 0.00 2.90
4724 6204 7.445121 TCTGTATGTTCCACCTGATTATCATC 58.555 38.462 0.00 0.00 0.00 2.92
4725 6205 7.290948 TCTCTGTATGTTCCACCTGATTATCAT 59.709 37.037 0.00 0.00 0.00 2.45
4726 6206 6.611236 TCTCTGTATGTTCCACCTGATTATCA 59.389 38.462 0.00 0.00 0.00 2.15
4727 6207 6.926272 GTCTCTGTATGTTCCACCTGATTATC 59.074 42.308 0.00 0.00 0.00 1.75
4728 6208 6.183361 GGTCTCTGTATGTTCCACCTGATTAT 60.183 42.308 0.00 0.00 0.00 1.28
4729 6209 5.128827 GGTCTCTGTATGTTCCACCTGATTA 59.871 44.000 0.00 0.00 0.00 1.75
4730 6210 4.080863 GGTCTCTGTATGTTCCACCTGATT 60.081 45.833 0.00 0.00 0.00 2.57
4731 6211 3.452627 GGTCTCTGTATGTTCCACCTGAT 59.547 47.826 0.00 0.00 0.00 2.90
4732 6212 2.832129 GGTCTCTGTATGTTCCACCTGA 59.168 50.000 0.00 0.00 0.00 3.86
4733 6213 2.417379 CGGTCTCTGTATGTTCCACCTG 60.417 54.545 0.00 0.00 0.00 4.00
4734 6214 1.825474 CGGTCTCTGTATGTTCCACCT 59.175 52.381 0.00 0.00 0.00 4.00
4735 6215 1.822990 TCGGTCTCTGTATGTTCCACC 59.177 52.381 0.00 0.00 0.00 4.61
4736 6216 3.802948 ATCGGTCTCTGTATGTTCCAC 57.197 47.619 0.00 0.00 0.00 4.02
4737 6217 4.893524 ACATATCGGTCTCTGTATGTTCCA 59.106 41.667 0.00 0.00 34.96 3.53
4738 6218 5.221263 ACACATATCGGTCTCTGTATGTTCC 60.221 44.000 0.00 0.00 36.05 3.62
4739 6219 5.833082 ACACATATCGGTCTCTGTATGTTC 58.167 41.667 0.00 0.00 36.05 3.18
4740 6220 5.854010 ACACATATCGGTCTCTGTATGTT 57.146 39.130 0.00 0.00 36.05 2.71
4741 6221 5.241064 GGTACACATATCGGTCTCTGTATGT 59.759 44.000 0.00 0.00 38.05 2.29
4742 6222 5.240844 TGGTACACATATCGGTCTCTGTATG 59.759 44.000 0.00 0.00 0.00 2.39
4743 6223 5.382616 TGGTACACATATCGGTCTCTGTAT 58.617 41.667 0.00 0.00 0.00 2.29
4744 6224 4.784177 TGGTACACATATCGGTCTCTGTA 58.216 43.478 0.00 0.00 0.00 2.74
4745 6225 3.628008 TGGTACACATATCGGTCTCTGT 58.372 45.455 0.00 0.00 0.00 3.41
4746 6226 4.649088 TTGGTACACATATCGGTCTCTG 57.351 45.455 0.00 0.00 39.29 3.35
4747 6227 5.670792 TTTTGGTACACATATCGGTCTCT 57.329 39.130 0.00 0.00 39.29 3.10
4748 6228 5.815740 ACATTTTGGTACACATATCGGTCTC 59.184 40.000 0.00 0.00 39.29 3.36
4749 6229 5.741011 ACATTTTGGTACACATATCGGTCT 58.259 37.500 0.00 0.00 39.29 3.85
4750 6230 6.255215 CAACATTTTGGTACACATATCGGTC 58.745 40.000 0.00 0.00 39.29 4.79
4751 6231 5.124776 CCAACATTTTGGTACACATATCGGT 59.875 40.000 2.21 0.00 46.63 4.69
4752 6232 5.577835 CCAACATTTTGGTACACATATCGG 58.422 41.667 2.21 0.00 46.63 4.18
4771 6251 3.434940 ACCCTCAAGATGTTACCCAAC 57.565 47.619 0.00 0.00 35.06 3.77
4772 6252 4.566907 GCTTACCCTCAAGATGTTACCCAA 60.567 45.833 0.00 0.00 0.00 4.12
4773 6253 3.054655 GCTTACCCTCAAGATGTTACCCA 60.055 47.826 0.00 0.00 0.00 4.51
4774 6254 3.200165 AGCTTACCCTCAAGATGTTACCC 59.800 47.826 0.00 0.00 0.00 3.69
4775 6255 4.489306 AGCTTACCCTCAAGATGTTACC 57.511 45.455 0.00 0.00 0.00 2.85
4776 6256 8.585881 TCATATAGCTTACCCTCAAGATGTTAC 58.414 37.037 0.00 0.00 0.00 2.50
4777 6257 8.721133 TCATATAGCTTACCCTCAAGATGTTA 57.279 34.615 0.00 0.00 0.00 2.41
4778 6258 7.618019 TCATATAGCTTACCCTCAAGATGTT 57.382 36.000 0.00 0.00 0.00 2.71
4779 6259 7.618019 TTCATATAGCTTACCCTCAAGATGT 57.382 36.000 0.00 0.00 0.00 3.06
4780 6260 8.099537 ACATTCATATAGCTTACCCTCAAGATG 58.900 37.037 0.00 0.00 0.00 2.90
4781 6261 8.212259 ACATTCATATAGCTTACCCTCAAGAT 57.788 34.615 0.00 0.00 0.00 2.40
4782 6262 7.618019 ACATTCATATAGCTTACCCTCAAGA 57.382 36.000 0.00 0.00 0.00 3.02
4783 6263 9.778741 TTAACATTCATATAGCTTACCCTCAAG 57.221 33.333 0.00 0.00 0.00 3.02
4785 6265 9.725019 CATTAACATTCATATAGCTTACCCTCA 57.275 33.333 0.00 0.00 0.00 3.86
4786 6266 9.944376 TCATTAACATTCATATAGCTTACCCTC 57.056 33.333 0.00 0.00 0.00 4.30
4793 6273 9.445878 CACCTCATCATTAACATTCATATAGCT 57.554 33.333 0.00 0.00 0.00 3.32
4794 6274 9.224267 ACACCTCATCATTAACATTCATATAGC 57.776 33.333 0.00 0.00 0.00 2.97
4796 6276 9.506018 CCACACCTCATCATTAACATTCATATA 57.494 33.333 0.00 0.00 0.00 0.86
4797 6277 8.000709 ACCACACCTCATCATTAACATTCATAT 58.999 33.333 0.00 0.00 0.00 1.78
4798 6278 7.282901 CACCACACCTCATCATTAACATTCATA 59.717 37.037 0.00 0.00 0.00 2.15
4799 6279 6.095860 CACCACACCTCATCATTAACATTCAT 59.904 38.462 0.00 0.00 0.00 2.57
4800 6280 5.415389 CACCACACCTCATCATTAACATTCA 59.585 40.000 0.00 0.00 0.00 2.57
4801 6281 5.677091 GCACCACACCTCATCATTAACATTC 60.677 44.000 0.00 0.00 0.00 2.67
4802 6282 4.158394 GCACCACACCTCATCATTAACATT 59.842 41.667 0.00 0.00 0.00 2.71
4803 6283 3.696051 GCACCACACCTCATCATTAACAT 59.304 43.478 0.00 0.00 0.00 2.71
4804 6284 3.081061 GCACCACACCTCATCATTAACA 58.919 45.455 0.00 0.00 0.00 2.41
4805 6285 2.423538 GGCACCACACCTCATCATTAAC 59.576 50.000 0.00 0.00 0.00 2.01
4806 6286 2.722094 GGCACCACACCTCATCATTAA 58.278 47.619 0.00 0.00 0.00 1.40
4807 6287 2.418368 GGCACCACACCTCATCATTA 57.582 50.000 0.00 0.00 0.00 1.90
4808 6288 3.271250 GGCACCACACCTCATCATT 57.729 52.632 0.00 0.00 0.00 2.57
4822 6302 7.040478 TGCATCTAATATGAAAATAGTGGGCAC 60.040 37.037 0.00 0.00 0.00 5.01
4823 6303 7.003482 TGCATCTAATATGAAAATAGTGGGCA 58.997 34.615 0.00 0.00 0.00 5.36
4824 6304 7.452880 TGCATCTAATATGAAAATAGTGGGC 57.547 36.000 0.00 0.00 0.00 5.36
4825 6305 9.850628 CAATGCATCTAATATGAAAATAGTGGG 57.149 33.333 0.00 0.00 0.00 4.61
4842 6322 9.715121 AAACTTGAATATTGAAACAATGCATCT 57.285 25.926 0.00 0.00 0.00 2.90
4843 6323 9.962759 GAAACTTGAATATTGAAACAATGCATC 57.037 29.630 0.00 0.00 0.00 3.91
4844 6324 8.938906 GGAAACTTGAATATTGAAACAATGCAT 58.061 29.630 0.00 0.00 0.00 3.96
4845 6325 7.930325 TGGAAACTTGAATATTGAAACAATGCA 59.070 29.630 7.16 0.00 0.00 3.96
4846 6326 8.309163 TGGAAACTTGAATATTGAAACAATGC 57.691 30.769 7.16 0.00 0.00 3.56
4850 6330 9.829507 ACAATTGGAAACTTGAATATTGAAACA 57.170 25.926 10.83 0.00 0.00 2.83
4859 6339 9.829507 TTTCAATGTACAATTGGAAACTTGAAT 57.170 25.926 17.57 1.00 32.17 2.57
4860 6340 9.658799 TTTTCAATGTACAATTGGAAACTTGAA 57.341 25.926 10.83 13.36 33.06 2.69
4861 6341 9.658799 TTTTTCAATGTACAATTGGAAACTTGA 57.341 25.926 17.15 8.32 36.53 3.02
4893 6373 8.506168 AAAACAGAAGTATCTCAAACACTTGA 57.494 30.769 0.00 0.00 39.30 3.02
4894 6374 9.226345 GAAAAACAGAAGTATCTCAAACACTTG 57.774 33.333 0.00 0.00 32.79 3.16
4895 6375 9.178758 AGAAAAACAGAAGTATCTCAAACACTT 57.821 29.630 0.00 0.00 35.27 3.16
4896 6376 8.738645 AGAAAAACAGAAGTATCTCAAACACT 57.261 30.769 0.00 0.00 32.03 3.55
4897 6377 9.788960 AAAGAAAAACAGAAGTATCTCAAACAC 57.211 29.630 0.00 0.00 32.03 3.32
4900 6380 9.716507 CGAAAAGAAAAACAGAAGTATCTCAAA 57.283 29.630 0.00 0.00 32.03 2.69
4901 6381 9.104965 TCGAAAAGAAAAACAGAAGTATCTCAA 57.895 29.630 0.00 0.00 32.03 3.02
4902 6382 8.657074 TCGAAAAGAAAAACAGAAGTATCTCA 57.343 30.769 0.00 0.00 32.03 3.27
4903 6383 9.931210 TTTCGAAAAGAAAAACAGAAGTATCTC 57.069 29.630 8.44 0.00 45.05 2.75
4917 6397 7.947282 ACCTTATGATGGTTTTCGAAAAGAAA 58.053 30.769 23.08 12.12 46.22 2.52
4918 6398 7.519032 ACCTTATGATGGTTTTCGAAAAGAA 57.481 32.000 23.08 14.51 33.34 2.52
4919 6399 7.447238 AGAACCTTATGATGGTTTTCGAAAAGA 59.553 33.333 23.08 13.32 46.59 2.52
4920 6400 7.593825 AGAACCTTATGATGGTTTTCGAAAAG 58.406 34.615 23.08 10.07 46.59 2.27
4921 6401 7.519032 AGAACCTTATGATGGTTTTCGAAAA 57.481 32.000 19.08 19.08 46.59 2.29
4922 6402 8.624367 TTAGAACCTTATGATGGTTTTCGAAA 57.376 30.769 6.47 6.47 46.59 3.46
4923 6403 8.801882 ATTAGAACCTTATGATGGTTTTCGAA 57.198 30.769 0.00 0.00 46.59 3.71
4924 6404 8.265055 AGATTAGAACCTTATGATGGTTTTCGA 58.735 33.333 0.00 0.00 46.59 3.71
4925 6405 8.438676 AGATTAGAACCTTATGATGGTTTTCG 57.561 34.615 0.00 0.00 46.59 3.46
4926 6406 9.396022 TGAGATTAGAACCTTATGATGGTTTTC 57.604 33.333 0.00 0.00 46.59 2.29
4927 6407 9.927081 ATGAGATTAGAACCTTATGATGGTTTT 57.073 29.630 0.00 0.00 46.59 2.43
4928 6408 9.927081 AATGAGATTAGAACCTTATGATGGTTT 57.073 29.630 0.00 0.00 46.59 3.27
4930 6410 9.927081 AAAATGAGATTAGAACCTTATGATGGT 57.073 29.630 0.00 0.00 39.91 3.55
4958 6438 9.319143 GCATACTTCATACTTCATAGACAACTT 57.681 33.333 0.00 0.00 0.00 2.66
4959 6439 8.478066 TGCATACTTCATACTTCATAGACAACT 58.522 33.333 0.00 0.00 0.00 3.16
4960 6440 8.648557 TGCATACTTCATACTTCATAGACAAC 57.351 34.615 0.00 0.00 0.00 3.32
4961 6441 9.836864 AATGCATACTTCATACTTCATAGACAA 57.163 29.630 0.00 0.00 0.00 3.18
4967 6447 9.851686 TTTCCTAATGCATACTTCATACTTCAT 57.148 29.630 0.00 0.00 0.00 2.57
4968 6448 9.679661 TTTTCCTAATGCATACTTCATACTTCA 57.320 29.630 0.00 0.00 0.00 3.02
4987 6467 9.295825 CCACTAATTATATGTGGCATTTTCCTA 57.704 33.333 8.88 0.00 43.61 2.94
4988 6468 8.181904 CCACTAATTATATGTGGCATTTTCCT 57.818 34.615 8.88 0.00 43.61 3.36
5003 6483 9.944376 ATGACGAAATACATAGCCACTAATTAT 57.056 29.630 0.00 0.00 0.00 1.28
5004 6484 9.772973 AATGACGAAATACATAGCCACTAATTA 57.227 29.630 0.00 0.00 0.00 1.40
5005 6485 8.677148 AATGACGAAATACATAGCCACTAATT 57.323 30.769 0.00 0.00 0.00 1.40
5006 6486 8.677148 AAATGACGAAATACATAGCCACTAAT 57.323 30.769 0.00 0.00 0.00 1.73
5007 6487 7.042992 CGAAATGACGAAATACATAGCCACTAA 60.043 37.037 0.00 0.00 35.09 2.24
5008 6488 6.419710 CGAAATGACGAAATACATAGCCACTA 59.580 38.462 0.00 0.00 35.09 2.74
5009 6489 5.234329 CGAAATGACGAAATACATAGCCACT 59.766 40.000 0.00 0.00 35.09 4.00
5010 6490 5.006358 ACGAAATGACGAAATACATAGCCAC 59.994 40.000 0.00 0.00 37.03 5.01
5011 6491 5.006261 CACGAAATGACGAAATACATAGCCA 59.994 40.000 0.00 0.00 37.03 4.75
5012 6492 5.432157 CACGAAATGACGAAATACATAGCC 58.568 41.667 0.00 0.00 37.03 3.93
5013 6493 5.432157 CCACGAAATGACGAAATACATAGC 58.568 41.667 0.00 0.00 37.03 2.97
5014 6494 5.751509 TCCCACGAAATGACGAAATACATAG 59.248 40.000 0.00 0.00 37.03 2.23
5015 6495 5.662456 TCCCACGAAATGACGAAATACATA 58.338 37.500 0.00 0.00 37.03 2.29
5016 6496 4.509616 TCCCACGAAATGACGAAATACAT 58.490 39.130 0.00 0.00 37.03 2.29
5017 6497 3.927854 TCCCACGAAATGACGAAATACA 58.072 40.909 0.00 0.00 37.03 2.29
5018 6498 3.308866 CCTCCCACGAAATGACGAAATAC 59.691 47.826 0.00 0.00 37.03 1.89
5019 6499 3.527533 CCTCCCACGAAATGACGAAATA 58.472 45.455 0.00 0.00 37.03 1.40
5020 6500 2.356135 CCTCCCACGAAATGACGAAAT 58.644 47.619 0.00 0.00 37.03 2.17
5021 6501 1.803334 CCTCCCACGAAATGACGAAA 58.197 50.000 0.00 0.00 37.03 3.46
5022 6502 0.672401 GCCTCCCACGAAATGACGAA 60.672 55.000 0.00 0.00 37.03 3.85
5023 6503 1.079405 GCCTCCCACGAAATGACGA 60.079 57.895 0.00 0.00 37.03 4.20
5024 6504 0.744414 ATGCCTCCCACGAAATGACG 60.744 55.000 0.00 0.00 39.31 4.35
5025 6505 0.734889 CATGCCTCCCACGAAATGAC 59.265 55.000 0.00 0.00 0.00 3.06
5026 6506 0.327924 ACATGCCTCCCACGAAATGA 59.672 50.000 0.00 0.00 0.00 2.57
5027 6507 1.176527 AACATGCCTCCCACGAAATG 58.823 50.000 0.00 0.00 0.00 2.32
5028 6508 2.752903 GTTAACATGCCTCCCACGAAAT 59.247 45.455 0.00 0.00 0.00 2.17
5029 6509 2.156098 GTTAACATGCCTCCCACGAAA 58.844 47.619 0.00 0.00 0.00 3.46
5030 6510 1.072489 TGTTAACATGCCTCCCACGAA 59.928 47.619 3.59 0.00 0.00 3.85
5031 6511 0.687920 TGTTAACATGCCTCCCACGA 59.312 50.000 3.59 0.00 0.00 4.35
5032 6512 1.529226 TTGTTAACATGCCTCCCACG 58.471 50.000 9.56 0.00 0.00 4.94
5033 6513 3.356290 AGATTGTTAACATGCCTCCCAC 58.644 45.455 9.56 0.00 0.00 4.61
5034 6514 3.737559 AGATTGTTAACATGCCTCCCA 57.262 42.857 9.56 0.00 0.00 4.37
5035 6515 5.594317 ACATAAGATTGTTAACATGCCTCCC 59.406 40.000 9.56 0.00 0.00 4.30
5036 6516 6.699575 ACATAAGATTGTTAACATGCCTCC 57.300 37.500 9.56 0.00 0.00 4.30
5037 6517 7.538575 ACAACATAAGATTGTTAACATGCCTC 58.461 34.615 9.56 4.73 36.93 4.70
5038 6518 7.394359 AGACAACATAAGATTGTTAACATGCCT 59.606 33.333 9.56 4.26 40.36 4.75
5039 6519 7.538575 AGACAACATAAGATTGTTAACATGCC 58.461 34.615 9.56 1.92 40.36 4.40
5040 6520 8.970691 AAGACAACATAAGATTGTTAACATGC 57.029 30.769 9.56 4.67 40.36 4.06
5098 6578 9.416284 AGTTTTTGGTAGGAAACTTTCAAGATA 57.584 29.630 3.93 0.00 41.86 1.98
5099 6579 8.306313 AGTTTTTGGTAGGAAACTTTCAAGAT 57.694 30.769 3.93 0.00 41.86 2.40
5100 6580 7.712204 AGTTTTTGGTAGGAAACTTTCAAGA 57.288 32.000 3.93 0.00 41.86 3.02
5129 6609 9.653287 CACAGACTTGAGTACAATTAGGAAATA 57.347 33.333 0.00 0.00 35.37 1.40
5130 6610 7.119846 GCACAGACTTGAGTACAATTAGGAAAT 59.880 37.037 0.00 0.00 35.37 2.17
5131 6611 6.426937 GCACAGACTTGAGTACAATTAGGAAA 59.573 38.462 0.00 0.00 35.37 3.13
5132 6612 5.932303 GCACAGACTTGAGTACAATTAGGAA 59.068 40.000 0.00 0.00 35.37 3.36
5133 6613 5.479306 GCACAGACTTGAGTACAATTAGGA 58.521 41.667 0.00 0.00 35.37 2.94
5134 6614 4.327357 CGCACAGACTTGAGTACAATTAGG 59.673 45.833 0.00 0.00 35.37 2.69
5135 6615 4.327357 CCGCACAGACTTGAGTACAATTAG 59.673 45.833 0.00 0.00 35.37 1.73
5136 6616 4.242475 CCGCACAGACTTGAGTACAATTA 58.758 43.478 0.00 0.00 35.37 1.40
5137 6617 3.067106 CCGCACAGACTTGAGTACAATT 58.933 45.455 0.00 0.00 35.37 2.32
5138 6618 2.612972 CCCGCACAGACTTGAGTACAAT 60.613 50.000 0.00 0.00 35.37 2.71
5139 6619 1.270094 CCCGCACAGACTTGAGTACAA 60.270 52.381 0.00 0.00 34.65 2.41
5140 6620 0.317160 CCCGCACAGACTTGAGTACA 59.683 55.000 0.00 0.00 0.00 2.90
5141 6621 0.317479 ACCCGCACAGACTTGAGTAC 59.683 55.000 0.00 0.00 0.00 2.73
5142 6622 1.045407 AACCCGCACAGACTTGAGTA 58.955 50.000 0.00 0.00 0.00 2.59
5143 6623 0.180406 AAACCCGCACAGACTTGAGT 59.820 50.000 0.00 0.00 0.00 3.41
5144 6624 2.163818 TAAACCCGCACAGACTTGAG 57.836 50.000 0.00 0.00 0.00 3.02
5145 6625 2.851263 ATAAACCCGCACAGACTTGA 57.149 45.000 0.00 0.00 0.00 3.02
5146 6626 5.560966 AAATATAAACCCGCACAGACTTG 57.439 39.130 0.00 0.00 0.00 3.16
5147 6627 6.015772 ACAAAAATATAAACCCGCACAGACTT 60.016 34.615 0.00 0.00 0.00 3.01
5148 6628 5.475564 ACAAAAATATAAACCCGCACAGACT 59.524 36.000 0.00 0.00 0.00 3.24
5149 6629 5.705902 ACAAAAATATAAACCCGCACAGAC 58.294 37.500 0.00 0.00 0.00 3.51
5150 6630 5.968528 ACAAAAATATAAACCCGCACAGA 57.031 34.783 0.00 0.00 0.00 3.41
5151 6631 6.866248 AGAAACAAAAATATAAACCCGCACAG 59.134 34.615 0.00 0.00 0.00 3.66
5152 6632 6.750148 AGAAACAAAAATATAAACCCGCACA 58.250 32.000 0.00 0.00 0.00 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.