Multiple sequence alignment - TraesCS5A01G284500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G284500 chr5A 100.000 5832 0 0 1 5832 492638155 492632324 0.000000e+00 10770.0
1 TraesCS5A01G284500 chr5A 82.227 512 74 13 998 1499 493817925 493817421 5.400000e-115 425.0
2 TraesCS5A01G284500 chr5A 80.403 546 66 28 991 1499 493779341 493779882 1.530000e-100 377.0
3 TraesCS5A01G284500 chr5A 100.000 169 0 0 1971 2139 446841720 446841888 4.390000e-81 313.0
4 TraesCS5A01G284500 chr5A 97.238 181 3 2 1971 2149 702454486 702454306 7.340000e-79 305.0
5 TraesCS5A01G284500 chr5A 85.475 179 26 0 1328 1506 493662538 493662716 2.770000e-43 187.0
6 TraesCS5A01G284500 chr5A 89.474 57 3 2 1914 1968 426529219 426529164 1.050000e-07 69.4
7 TraesCS5A01G284500 chr5A 90.909 44 4 0 1925 1968 512230587 512230544 6.310000e-05 60.2
8 TraesCS5A01G284500 chr5D 89.346 3351 216 44 2137 5411 389460636 389457351 0.000000e+00 4080.0
9 TraesCS5A01G284500 chr5D 94.901 1412 40 10 523 1910 389462090 389460687 0.000000e+00 2180.0
10 TraesCS5A01G284500 chr5D 93.493 292 12 1 1 285 389462899 389462608 1.500000e-115 427.0
11 TraesCS5A01G284500 chr5D 81.569 510 81 11 998 1499 390504140 390504644 5.440000e-110 409.0
12 TraesCS5A01G284500 chr5D 80.639 532 74 22 1000 1506 390371484 390372011 9.170000e-103 385.0
13 TraesCS5A01G284500 chr5D 79.259 540 65 34 1000 1499 390417850 390418382 3.370000e-87 333.0
14 TraesCS5A01G284500 chr5D 90.909 154 13 1 286 438 389462267 389462114 7.660000e-49 206.0
15 TraesCS5A01G284500 chr5D 93.750 48 1 2 5410 5456 44418159 44418113 2.920000e-08 71.3
16 TraesCS5A01G284500 chr5D 90.909 44 4 0 1925 1968 370551343 370551300 6.310000e-05 60.2
17 TraesCS5A01G284500 chr5D 100.000 30 0 0 1939 1968 467605809 467605780 8.160000e-04 56.5
18 TraesCS5A01G284500 chr5B 95.022 1366 42 10 611 1963 469125446 469124094 0.000000e+00 2122.0
19 TraesCS5A01G284500 chr5B 88.133 1837 130 36 2145 3949 469124087 469122307 0.000000e+00 2104.0
20 TraesCS5A01G284500 chr5B 90.717 711 63 2 998 1708 469300605 469299898 0.000000e+00 944.0
21 TraesCS5A01G284500 chr5B 87.183 827 57 22 4041 4847 469122178 469121381 0.000000e+00 894.0
22 TraesCS5A01G284500 chr5B 80.334 539 65 28 998 1499 470512103 470512637 2.570000e-98 370.0
23 TraesCS5A01G284500 chr5B 86.626 329 34 7 5040 5361 469121385 469121060 7.190000e-94 355.0
24 TraesCS5A01G284500 chr5B 99.415 171 1 0 1967 2137 557109123 557109293 1.580000e-80 311.0
25 TraesCS5A01G284500 chr5B 89.655 232 17 3 279 510 469125872 469125648 7.390000e-74 289.0
26 TraesCS5A01G284500 chr5B 87.850 214 15 8 1 210 469131672 469131466 2.100000e-59 241.0
27 TraesCS5A01G284500 chr5B 79.734 301 51 8 1204 1499 470604059 470604354 5.920000e-50 209.0
28 TraesCS5A01G284500 chr5B 93.407 91 5 1 523 613 469125665 469125576 3.670000e-27 134.0
29 TraesCS5A01G284500 chr5B 95.238 84 2 1 203 284 469126402 469126319 1.320000e-26 132.0
30 TraesCS5A01G284500 chr5B 84.615 91 13 1 4727 4816 469292113 469292023 8.050000e-14 89.8
31 TraesCS5A01G284500 chr5B 87.719 57 5 2 1914 1968 636985769 636985825 1.360000e-06 65.8
32 TraesCS5A01G284500 chr1B 86.085 424 47 10 5413 5832 520376641 520376226 4.150000e-121 446.0
33 TraesCS5A01G284500 chr7D 85.337 416 54 6 5417 5828 618259770 618260182 1.940000e-114 424.0
34 TraesCS5A01G284500 chr7D 82.653 392 50 14 5413 5796 518053293 518052912 1.210000e-86 331.0
35 TraesCS5A01G284500 chr7D 98.361 183 3 0 1962 2144 569602738 569602920 7.290000e-84 322.0
36 TraesCS5A01G284500 chr7D 84.211 285 39 6 5551 5832 69240690 69240409 7.450000e-69 272.0
37 TraesCS5A01G284500 chr7D 81.624 234 24 8 5546 5779 437647473 437647687 6.010000e-40 176.0
38 TraesCS5A01G284500 chr7D 79.741 232 30 9 5412 5631 358988232 358988006 1.010000e-32 152.0
39 TraesCS5A01G284500 chr7A 99.419 172 1 0 1968 2139 17978823 17978994 4.390000e-81 313.0
40 TraesCS5A01G284500 chr6D 97.814 183 1 3 1963 2143 455497377 455497558 4.390000e-81 313.0
41 TraesCS5A01G284500 chr2A 100.000 169 0 0 1971 2139 585793133 585792965 4.390000e-81 313.0
42 TraesCS5A01G284500 chr2A 80.476 420 69 9 5413 5827 717958211 717957800 5.680000e-80 309.0
43 TraesCS5A01G284500 chr2A 97.238 181 3 2 1964 2143 2261362 2261183 7.340000e-79 305.0
44 TraesCS5A01G284500 chr2A 77.027 296 59 8 5452 5745 43129954 43130242 1.680000e-35 161.0
45 TraesCS5A01G284500 chr1D 99.415 171 1 0 1968 2138 453216413 453216583 1.580000e-80 311.0
46 TraesCS5A01G284500 chr1D 79.592 343 44 15 5432 5772 484297622 484297304 7.610000e-54 222.0
47 TraesCS5A01G284500 chr1D 78.992 238 38 8 5593 5828 196452549 196452776 1.010000e-32 152.0
48 TraesCS5A01G284500 chr3A 81.220 410 54 15 5404 5804 513427877 513428272 5.680000e-80 309.0
49 TraesCS5A01G284500 chr3D 76.794 418 65 18 5413 5825 68916027 68916417 7.660000e-49 206.0
50 TraesCS5A01G284500 chr3D 76.506 166 31 7 2137 2298 551395697 551395858 3.750000e-12 84.2
51 TraesCS5A01G284500 chr6B 83.684 190 22 7 5416 5597 567764328 567764516 2.790000e-38 171.0
52 TraesCS5A01G284500 chr6B 90.698 43 4 0 1926 1968 12639176 12639218 2.270000e-04 58.4
53 TraesCS5A01G284500 chr4B 77.612 201 36 3 2137 2335 620467161 620467354 4.780000e-21 113.0
54 TraesCS5A01G284500 chr4B 97.500 40 1 0 1929 1968 546127197 546127158 1.050000e-07 69.4
55 TraesCS5A01G284500 chr2B 89.091 55 4 1 1914 1966 789086507 789086453 3.770000e-07 67.6
56 TraesCS5A01G284500 chr2D 88.889 54 4 2 5405 5457 425801648 425801596 1.360000e-06 65.8
57 TraesCS5A01G284500 chr4D 83.562 73 5 2 2264 2336 498382624 498382559 1.750000e-05 62.1
58 TraesCS5A01G284500 chr4D 100.000 28 0 0 2308 2335 427031209 427031182 1.100000e-02 52.8
59 TraesCS5A01G284500 chr6A 90.909 44 4 0 1925 1968 420834475 420834518 6.310000e-05 60.2
60 TraesCS5A01G284500 chr3B 89.362 47 3 2 5413 5458 771327466 771327421 2.270000e-04 58.4
61 TraesCS5A01G284500 chrUn 100.000 28 0 0 5413 5440 12718110 12718083 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G284500 chr5A 492632324 492638155 5831 True 10770.000000 10770 100.00000 1 5832 1 chr5A.!!$R2 5831
1 TraesCS5A01G284500 chr5A 493817421 493817925 504 True 425.000000 425 82.22700 998 1499 1 chr5A.!!$R3 501
2 TraesCS5A01G284500 chr5A 493779341 493779882 541 False 377.000000 377 80.40300 991 1499 1 chr5A.!!$F3 508
3 TraesCS5A01G284500 chr5D 389457351 389462899 5548 True 1723.250000 4080 92.16225 1 5411 4 chr5D.!!$R4 5410
4 TraesCS5A01G284500 chr5D 390504140 390504644 504 False 409.000000 409 81.56900 998 1499 1 chr5D.!!$F3 501
5 TraesCS5A01G284500 chr5D 390371484 390372011 527 False 385.000000 385 80.63900 1000 1506 1 chr5D.!!$F1 506
6 TraesCS5A01G284500 chr5D 390417850 390418382 532 False 333.000000 333 79.25900 1000 1499 1 chr5D.!!$F2 499
7 TraesCS5A01G284500 chr5B 469299898 469300605 707 True 944.000000 944 90.71700 998 1708 1 chr5B.!!$R3 710
8 TraesCS5A01G284500 chr5B 469121060 469126402 5342 True 861.428571 2122 90.75200 203 5361 7 chr5B.!!$R4 5158
9 TraesCS5A01G284500 chr5B 470512103 470512637 534 False 370.000000 370 80.33400 998 1499 1 chr5B.!!$F1 501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
912 1525 0.613260 AACTGCAACCTCGAGCCATA 59.387 50.0 6.99 0.00 0.00 2.74 F
1973 2655 0.180406 AGACTGAACCGGCAAACAGT 59.820 50.0 18.45 18.45 44.56 3.55 F
1996 2678 0.107214 GTAGCTAGCCCAACATGCCA 60.107 55.0 12.13 0.00 0.00 4.92 F
1997 2679 0.181114 TAGCTAGCCCAACATGCCAG 59.819 55.0 12.13 0.00 0.00 4.85 F
3817 4541 0.113776 TGTACCCTCTGTCGTTCCCT 59.886 55.0 0.00 0.00 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1977 2659 0.107214 TGGCATGTTGGGCTAGCTAC 60.107 55.000 15.72 10.98 0.0 3.58 R
2930 3634 0.895530 GAGTCTCCCCATCACAACGA 59.104 55.000 0.00 0.00 0.0 3.85 R
3189 3903 2.151202 GTGGCCTCGAGACATCAAAAA 58.849 47.619 15.71 0.00 0.0 1.94 R
4252 5046 0.111704 CGACAGACAGAAAACACGCG 60.112 55.000 3.53 3.53 0.0 6.01 R
5054 5881 0.107410 TCACGCACCCACAAGTTCTT 60.107 50.000 0.00 0.00 0.0 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 85 2.800544 CCCGTTTGACGCTCATAATAGG 59.199 50.000 0.00 0.00 40.91 2.57
181 189 6.092670 TGCGTGTACTATTCTAAGTCGTAACT 59.907 38.462 0.00 0.00 37.32 2.24
189 197 9.310716 ACTATTCTAAGTCGTAACTTTATTGGC 57.689 33.333 0.00 0.00 43.28 4.52
363 841 6.095440 CGAGGTGGATGGAAATTTTTCTATGT 59.905 38.462 6.62 0.00 38.31 2.29
392 870 6.872585 ATTATGAAGCAATCCCAAGGAAAA 57.127 33.333 0.00 0.00 34.34 2.29
448 926 4.180723 ACCCATGTAGGAAAAAGGTCCTA 58.819 43.478 0.00 0.00 46.69 2.94
510 988 8.746052 TTGAATCAAAGAGACCTAAAAGTTCA 57.254 30.769 0.00 0.00 0.00 3.18
511 989 8.154649 TGAATCAAAGAGACCTAAAAGTTCAC 57.845 34.615 0.00 0.00 0.00 3.18
512 990 7.228706 TGAATCAAAGAGACCTAAAAGTTCACC 59.771 37.037 0.00 0.00 0.00 4.02
513 991 5.374071 TCAAAGAGACCTAAAAGTTCACCC 58.626 41.667 0.00 0.00 0.00 4.61
514 992 3.679824 AGAGACCTAAAAGTTCACCCG 57.320 47.619 0.00 0.00 0.00 5.28
515 993 2.074576 GAGACCTAAAAGTTCACCCGC 58.925 52.381 0.00 0.00 0.00 6.13
516 994 1.418637 AGACCTAAAAGTTCACCCGCA 59.581 47.619 0.00 0.00 0.00 5.69
517 995 2.158726 AGACCTAAAAGTTCACCCGCAA 60.159 45.455 0.00 0.00 0.00 4.85
518 996 2.619646 GACCTAAAAGTTCACCCGCAAA 59.380 45.455 0.00 0.00 0.00 3.68
519 997 3.227614 ACCTAAAAGTTCACCCGCAAAT 58.772 40.909 0.00 0.00 0.00 2.32
520 998 4.400120 ACCTAAAAGTTCACCCGCAAATA 58.600 39.130 0.00 0.00 0.00 1.40
521 999 4.828387 ACCTAAAAGTTCACCCGCAAATAA 59.172 37.500 0.00 0.00 0.00 1.40
522 1000 5.302313 ACCTAAAAGTTCACCCGCAAATAAA 59.698 36.000 0.00 0.00 0.00 1.40
523 1001 6.183360 ACCTAAAAGTTCACCCGCAAATAAAA 60.183 34.615 0.00 0.00 0.00 1.52
524 1002 6.702282 CCTAAAAGTTCACCCGCAAATAAAAA 59.298 34.615 0.00 0.00 0.00 1.94
525 1003 6.597262 AAAAGTTCACCCGCAAATAAAAAG 57.403 33.333 0.00 0.00 0.00 2.27
526 1004 5.523438 AAGTTCACCCGCAAATAAAAAGA 57.477 34.783 0.00 0.00 0.00 2.52
527 1005 5.121221 AGTTCACCCGCAAATAAAAAGAG 57.879 39.130 0.00 0.00 0.00 2.85
528 1006 4.825085 AGTTCACCCGCAAATAAAAAGAGA 59.175 37.500 0.00 0.00 0.00 3.10
529 1007 4.759516 TCACCCGCAAATAAAAAGAGAC 57.240 40.909 0.00 0.00 0.00 3.36
530 1008 3.504520 TCACCCGCAAATAAAAAGAGACC 59.495 43.478 0.00 0.00 0.00 3.85
531 1009 3.506067 CACCCGCAAATAAAAAGAGACCT 59.494 43.478 0.00 0.00 0.00 3.85
532 1010 4.698304 CACCCGCAAATAAAAAGAGACCTA 59.302 41.667 0.00 0.00 0.00 3.08
533 1011 5.182380 CACCCGCAAATAAAAAGAGACCTAA 59.818 40.000 0.00 0.00 0.00 2.69
534 1012 5.771165 ACCCGCAAATAAAAAGAGACCTAAA 59.229 36.000 0.00 0.00 0.00 1.85
535 1013 6.265876 ACCCGCAAATAAAAAGAGACCTAAAA 59.734 34.615 0.00 0.00 0.00 1.52
536 1014 7.149307 CCCGCAAATAAAAAGAGACCTAAAAA 58.851 34.615 0.00 0.00 0.00 1.94
537 1015 7.328493 CCCGCAAATAAAAAGAGACCTAAAAAG 59.672 37.037 0.00 0.00 0.00 2.27
589 1067 2.299013 GCCATGCATGAATCATGATGGT 59.701 45.455 31.37 15.22 43.81 3.55
910 1523 1.597854 CAACTGCAACCTCGAGCCA 60.598 57.895 6.99 0.10 0.00 4.75
911 1524 0.957395 CAACTGCAACCTCGAGCCAT 60.957 55.000 6.99 0.00 0.00 4.40
912 1525 0.613260 AACTGCAACCTCGAGCCATA 59.387 50.000 6.99 0.00 0.00 2.74
913 1526 0.833287 ACTGCAACCTCGAGCCATAT 59.167 50.000 6.99 0.00 0.00 1.78
914 1527 2.039418 ACTGCAACCTCGAGCCATATA 58.961 47.619 6.99 0.00 0.00 0.86
915 1528 2.036475 ACTGCAACCTCGAGCCATATAG 59.964 50.000 6.99 3.28 0.00 1.31
916 1529 1.344438 TGCAACCTCGAGCCATATAGG 59.656 52.381 6.99 0.00 41.84 2.57
950 1563 2.175811 GCACCGAAACACATCGCC 59.824 61.111 0.00 0.00 41.40 5.54
1467 2146 3.195610 TGGTGCAGATCATCGTCTACTTT 59.804 43.478 0.00 0.00 0.00 2.66
1806 2488 1.154263 CGAGTCGGACGTCAAGACC 60.154 63.158 28.23 21.24 35.65 3.85
1885 2567 0.247736 AGAACAGACACAGGCGATCC 59.752 55.000 0.00 0.00 0.00 3.36
1910 2592 1.352017 TGCACACTCATCCCTGTGAAT 59.648 47.619 1.99 0.00 40.28 2.57
1911 2593 2.224843 TGCACACTCATCCCTGTGAATT 60.225 45.455 1.99 0.00 40.28 2.17
1912 2594 2.163010 GCACACTCATCCCTGTGAATTG 59.837 50.000 1.99 0.00 40.28 2.32
1913 2595 3.415212 CACACTCATCCCTGTGAATTGT 58.585 45.455 0.00 0.00 40.28 2.71
1914 2596 3.189910 CACACTCATCCCTGTGAATTGTG 59.810 47.826 0.00 0.00 40.28 3.33
1916 2598 4.074259 CACTCATCCCTGTGAATTGTGAA 58.926 43.478 0.00 0.00 36.38 3.18
1917 2599 4.155462 CACTCATCCCTGTGAATTGTGAAG 59.845 45.833 0.00 0.00 36.38 3.02
1918 2600 3.689347 TCATCCCTGTGAATTGTGAAGG 58.311 45.455 0.00 0.00 0.00 3.46
1919 2601 1.909700 TCCCTGTGAATTGTGAAGGC 58.090 50.000 0.00 0.00 0.00 4.35
1920 2602 1.144708 TCCCTGTGAATTGTGAAGGCA 59.855 47.619 0.00 0.00 0.00 4.75
1921 2603 2.173519 CCCTGTGAATTGTGAAGGCAT 58.826 47.619 0.00 0.00 0.00 4.40
1922 2604 3.010027 TCCCTGTGAATTGTGAAGGCATA 59.990 43.478 0.00 0.00 0.00 3.14
1923 2605 3.956199 CCCTGTGAATTGTGAAGGCATAT 59.044 43.478 0.00 0.00 0.00 1.78
1927 2609 4.403113 TGTGAATTGTGAAGGCATATGCAT 59.597 37.500 28.07 19.95 44.36 3.96
1937 2619 6.209391 GTGAAGGCATATGCATACCCTATTTT 59.791 38.462 28.07 10.87 44.36 1.82
1962 2644 1.149148 GCACCTCCGAAAGACTGAAC 58.851 55.000 0.00 0.00 0.00 3.18
1964 2646 0.317479 ACCTCCGAAAGACTGAACCG 59.683 55.000 0.00 0.00 0.00 4.44
1966 2648 1.005394 TCCGAAAGACTGAACCGGC 60.005 57.895 0.00 0.00 39.96 6.13
1967 2649 1.301401 CCGAAAGACTGAACCGGCA 60.301 57.895 0.00 0.00 33.47 5.69
1968 2650 0.882927 CCGAAAGACTGAACCGGCAA 60.883 55.000 0.00 0.00 33.47 4.52
1969 2651 0.941542 CGAAAGACTGAACCGGCAAA 59.058 50.000 0.00 0.00 0.00 3.68
1970 2652 1.333791 CGAAAGACTGAACCGGCAAAC 60.334 52.381 0.00 0.00 0.00 2.93
1971 2653 1.673920 GAAAGACTGAACCGGCAAACA 59.326 47.619 0.00 0.00 0.00 2.83
1972 2654 1.308998 AAGACTGAACCGGCAAACAG 58.691 50.000 0.00 8.80 36.58 3.16
1973 2655 0.180406 AGACTGAACCGGCAAACAGT 59.820 50.000 18.45 18.45 44.56 3.55
1974 2656 0.307760 GACTGAACCGGCAAACAGTG 59.692 55.000 21.73 0.00 42.45 3.66
1975 2657 1.101049 ACTGAACCGGCAAACAGTGG 61.101 55.000 17.95 0.33 41.16 4.00
1994 2676 2.311294 CGTAGCTAGCCCAACATGC 58.689 57.895 12.13 0.00 0.00 4.06
1995 2677 1.160329 CGTAGCTAGCCCAACATGCC 61.160 60.000 12.13 0.00 0.00 4.40
1996 2678 0.107214 GTAGCTAGCCCAACATGCCA 60.107 55.000 12.13 0.00 0.00 4.92
1997 2679 0.181114 TAGCTAGCCCAACATGCCAG 59.819 55.000 12.13 0.00 0.00 4.85
1998 2680 2.123428 GCTAGCCCAACATGCCAGG 61.123 63.158 2.29 0.00 0.00 4.45
1999 2681 1.454479 CTAGCCCAACATGCCAGGG 60.454 63.158 12.20 12.20 45.68 4.45
2000 2682 2.215451 CTAGCCCAACATGCCAGGGT 62.215 60.000 16.46 11.28 44.69 4.34
2001 2683 2.497792 TAGCCCAACATGCCAGGGTG 62.498 60.000 16.46 0.00 44.69 4.61
2002 2684 2.681064 CCCAACATGCCAGGGTGG 60.681 66.667 6.42 6.42 41.55 4.61
2003 2685 2.118076 CCAACATGCCAGGGTGGT 59.882 61.111 4.99 0.00 40.46 4.16
2004 2686 1.978617 CCAACATGCCAGGGTGGTC 60.979 63.158 4.99 0.00 40.46 4.02
2005 2687 1.978617 CAACATGCCAGGGTGGTCC 60.979 63.158 0.00 0.00 40.46 4.46
2006 2688 2.468868 AACATGCCAGGGTGGTCCA 61.469 57.895 0.00 0.00 40.46 4.02
2007 2689 2.361610 CATGCCAGGGTGGTCCAC 60.362 66.667 14.13 14.13 40.46 4.02
2022 2704 5.083533 TGGTCCACCAATGCAAAATATTC 57.916 39.130 0.00 0.00 44.35 1.75
2023 2705 4.529769 TGGTCCACCAATGCAAAATATTCA 59.470 37.500 0.00 0.00 44.35 2.57
2024 2706 4.869861 GGTCCACCAATGCAAAATATTCAC 59.130 41.667 0.00 0.00 35.64 3.18
2025 2707 5.477510 GTCCACCAATGCAAAATATTCACA 58.522 37.500 0.00 0.00 0.00 3.58
2026 2708 6.108015 GTCCACCAATGCAAAATATTCACAT 58.892 36.000 0.00 0.00 0.00 3.21
2027 2709 7.264221 GTCCACCAATGCAAAATATTCACATA 58.736 34.615 0.00 0.00 0.00 2.29
2028 2710 7.763528 GTCCACCAATGCAAAATATTCACATAA 59.236 33.333 0.00 0.00 0.00 1.90
2029 2711 8.316946 TCCACCAATGCAAAATATTCACATAAA 58.683 29.630 0.00 0.00 0.00 1.40
2030 2712 9.111613 CCACCAATGCAAAATATTCACATAAAT 57.888 29.630 0.00 0.00 0.00 1.40
2091 2773 9.067963 TGCTATATAGATTATGGGGAAATTCCA 57.932 33.333 14.68 0.00 38.64 3.53
2092 2774 9.566432 GCTATATAGATTATGGGGAAATTCCAG 57.434 37.037 14.68 0.00 38.64 3.86
2094 2776 4.475919 AGATTATGGGGAAATTCCAGGG 57.524 45.455 14.68 0.00 38.64 4.45
2095 2777 3.799578 AGATTATGGGGAAATTCCAGGGT 59.200 43.478 14.68 0.00 38.64 4.34
2096 2778 3.396685 TTATGGGGAAATTCCAGGGTG 57.603 47.619 14.68 0.00 38.64 4.61
2097 2779 0.339510 ATGGGGAAATTCCAGGGTGG 59.660 55.000 14.68 0.00 38.64 4.61
2098 2780 1.077298 TGGGGAAATTCCAGGGTGGT 61.077 55.000 14.68 0.00 38.64 4.16
2099 2781 0.324368 GGGGAAATTCCAGGGTGGTC 60.324 60.000 14.68 0.00 38.64 4.02
2100 2782 0.324368 GGGAAATTCCAGGGTGGTCC 60.324 60.000 14.68 0.00 38.64 4.46
2101 2783 0.407918 GGAAATTCCAGGGTGGTCCA 59.592 55.000 7.23 0.00 39.03 4.02
2102 2784 1.007118 GGAAATTCCAGGGTGGTCCAT 59.993 52.381 7.23 0.00 39.03 3.41
2103 2785 2.102578 GAAATTCCAGGGTGGTCCATG 58.897 52.381 0.00 0.00 44.12 3.66
2114 2796 3.495729 GTCCATGGACCACCCTGT 58.504 61.111 31.37 0.00 39.08 4.00
2115 2797 1.299976 GTCCATGGACCACCCTGTC 59.700 63.158 31.37 5.53 39.08 3.51
2121 2803 3.647771 GACCACCCTGTCCACCCC 61.648 72.222 0.00 0.00 0.00 4.95
2124 2806 2.124085 CACCCTGTCCACCCCCTA 59.876 66.667 0.00 0.00 0.00 3.53
2125 2807 1.995626 CACCCTGTCCACCCCCTAG 60.996 68.421 0.00 0.00 0.00 3.02
2126 2808 2.181773 ACCCTGTCCACCCCCTAGA 61.182 63.158 0.00 0.00 0.00 2.43
2127 2809 1.318380 CCCTGTCCACCCCCTAGAT 59.682 63.158 0.00 0.00 0.00 1.98
2128 2810 0.566176 CCCTGTCCACCCCCTAGATA 59.434 60.000 0.00 0.00 0.00 1.98
2129 2811 1.718280 CCTGTCCACCCCCTAGATAC 58.282 60.000 0.00 0.00 0.00 2.24
2130 2812 1.329256 CTGTCCACCCCCTAGATACG 58.671 60.000 0.00 0.00 0.00 3.06
2131 2813 0.757935 TGTCCACCCCCTAGATACGC 60.758 60.000 0.00 0.00 0.00 4.42
2132 2814 1.152398 TCCACCCCCTAGATACGCC 60.152 63.158 0.00 0.00 0.00 5.68
2133 2815 1.458777 CCACCCCCTAGATACGCCA 60.459 63.158 0.00 0.00 0.00 5.69
2134 2816 1.746517 CACCCCCTAGATACGCCAC 59.253 63.158 0.00 0.00 0.00 5.01
2135 2817 0.759436 CACCCCCTAGATACGCCACT 60.759 60.000 0.00 0.00 0.00 4.00
2149 2831 1.892338 CCACTGCCGGCAAATCATT 59.108 52.632 32.09 7.55 0.00 2.57
2154 2836 2.036992 ACTGCCGGCAAATCATTTTGAA 59.963 40.909 32.09 1.71 44.11 2.69
2164 2846 9.823098 CGGCAAATCATTTTGAAATTGATAAAA 57.177 25.926 13.67 0.00 44.11 1.52
2211 2895 1.067495 GGAACGTCTCCTTCCACTGAG 60.067 57.143 8.87 0.00 41.61 3.35
2214 2898 0.534412 CGTCTCCTTCCACTGAGCAT 59.466 55.000 0.00 0.00 0.00 3.79
2230 2914 1.070758 AGCATGTATCGCCGGAAATCT 59.929 47.619 5.05 0.00 0.00 2.40
2244 2928 5.452356 GCCGGAAATCTTGAAATGAATCCAT 60.452 40.000 5.05 0.00 32.82 3.41
2245 2929 6.239008 GCCGGAAATCTTGAAATGAATCCATA 60.239 38.462 5.05 0.00 32.82 2.74
2262 2946 8.531146 TGAATCCATAATAATACGAGCATCAGA 58.469 33.333 0.00 0.00 33.17 3.27
2274 2958 3.368427 CGAGCATCAGAACTTGAACCCTA 60.368 47.826 0.00 0.00 39.77 3.53
2275 2959 4.187694 GAGCATCAGAACTTGAACCCTAG 58.812 47.826 0.00 0.00 39.77 3.02
2279 2963 2.038557 TCAGAACTTGAACCCTAGTGGC 59.961 50.000 0.00 0.00 37.83 5.01
2301 2985 3.520862 GGATACCGCCGTCCACGA 61.521 66.667 0.00 0.00 43.02 4.35
2340 3024 2.951642 CCACATATTGGTTCGCATCCTT 59.048 45.455 0.00 0.00 41.10 3.36
2353 3037 1.340889 GCATCCTTGTTTTGGTGCTGA 59.659 47.619 0.00 0.00 32.72 4.26
2361 3045 6.663093 TCCTTGTTTTGGTGCTGACATATATT 59.337 34.615 0.00 0.00 0.00 1.28
2395 3079 5.587388 ATGACATGATGGGAAAATGTGAC 57.413 39.130 0.00 0.00 34.74 3.67
2467 3154 4.938080 ACCACTCTTGCAGTTATATCGAG 58.062 43.478 0.00 0.00 30.26 4.04
2473 3160 6.313905 ACTCTTGCAGTTATATCGAGTTTTGG 59.686 38.462 0.00 0.00 26.56 3.28
2487 3174 6.435428 TCGAGTTTTGGTAGATTTCTTTTGC 58.565 36.000 0.00 0.00 0.00 3.68
2495 3182 9.733556 TTTGGTAGATTTCTTTTGCTATGTCTA 57.266 29.630 0.00 0.00 0.00 2.59
2496 3183 9.905713 TTGGTAGATTTCTTTTGCTATGTCTAT 57.094 29.630 0.00 0.00 0.00 1.98
2604 3292 2.432444 CTTTATCACCCGAACAGGCAA 58.568 47.619 0.00 0.00 39.21 4.52
2608 3296 1.890041 CACCCGAACAGGCAAACGA 60.890 57.895 0.00 0.00 39.21 3.85
2659 3347 2.574322 CCAGCTTGTTGTTTTCGATCG 58.426 47.619 9.36 9.36 0.00 3.69
2668 3356 3.993376 TTTTCGATCGCGGACGGGG 62.993 63.158 20.75 0.10 40.63 5.73
2709 3412 1.336240 CGGAGAAGAAACCGTTACCGT 60.336 52.381 0.00 0.00 43.53 4.83
2724 3427 2.325082 CCGTTGAAAGAGCCACGGG 61.325 63.158 1.55 0.00 37.13 5.28
2770 3473 0.181114 TCACAAGCCTCACAAGCACT 59.819 50.000 0.00 0.00 0.00 4.40
2800 3503 1.811266 CGATGTGGTGGAGGCGAAG 60.811 63.158 0.00 0.00 0.00 3.79
2909 3613 2.927477 TGAAAATACGCCATCGAGTCAC 59.073 45.455 0.00 0.00 39.41 3.67
2910 3614 2.961526 AAATACGCCATCGAGTCACT 57.038 45.000 0.00 0.00 39.41 3.41
3037 3742 4.614535 CGCAAGAAAGTCAAGAAGGAATGG 60.615 45.833 0.00 0.00 43.02 3.16
3115 3823 5.663106 AGCTAGGATGACAGTAGAAATTCCA 59.337 40.000 0.00 0.00 0.00 3.53
3189 3903 9.421399 ACCTTATTTATTCCAAAATCGATCCTT 57.579 29.630 0.00 0.00 31.63 3.36
3209 3923 1.808411 TTTTGATGTCTCGAGGCCAC 58.192 50.000 15.72 9.03 0.00 5.01
3224 3938 4.036380 CGAGGCCACTTTTAGTTTTTGTCT 59.964 41.667 5.01 0.00 0.00 3.41
3225 3939 5.237779 CGAGGCCACTTTTAGTTTTTGTCTA 59.762 40.000 5.01 0.00 0.00 2.59
3244 3958 7.912056 TGTCTAGAATCCAATGCAATATAGC 57.088 36.000 0.00 0.00 0.00 2.97
3289 4003 2.312348 GCCGTATTTGGTTTTGTGACG 58.688 47.619 0.00 0.00 0.00 4.35
3363 4077 8.895737 ACAAAATAAGACAAGTTAGAAAACGGA 58.104 29.630 0.00 0.00 40.73 4.69
3708 4429 4.097892 ACAAACTGAAAAGTTGTAGGCCTG 59.902 41.667 17.99 0.00 31.64 4.85
3811 4535 1.548719 TGGAACATGTACCCTCTGTCG 59.451 52.381 15.61 0.00 0.00 4.35
3812 4536 1.549170 GGAACATGTACCCTCTGTCGT 59.451 52.381 0.00 0.00 0.00 4.34
3816 4540 1.134788 CATGTACCCTCTGTCGTTCCC 60.135 57.143 0.00 0.00 0.00 3.97
3817 4541 0.113776 TGTACCCTCTGTCGTTCCCT 59.886 55.000 0.00 0.00 0.00 4.20
3818 4542 0.816373 GTACCCTCTGTCGTTCCCTC 59.184 60.000 0.00 0.00 0.00 4.30
3819 4543 0.324091 TACCCTCTGTCGTTCCCTCC 60.324 60.000 0.00 0.00 0.00 4.30
3820 4544 2.359967 CCCTCTGTCGTTCCCTCCC 61.360 68.421 0.00 0.00 0.00 4.30
3868 4592 7.942341 TGGTTCACACTAAGAAATAATTGAGGT 59.058 33.333 0.00 0.00 0.00 3.85
3909 4633 6.201425 TGTTAGTGGAACAGACGAATAAACAC 59.799 38.462 0.00 0.00 43.30 3.32
3911 4635 3.187842 GTGGAACAGACGAATAAACACCC 59.812 47.826 0.00 0.00 41.80 4.61
4006 4734 1.202222 GCATTCATACCACTGCTGCAC 60.202 52.381 0.00 0.00 0.00 4.57
4032 4760 2.022195 GTAGCACATAGACCTGTCCGA 58.978 52.381 0.00 0.00 0.00 4.55
4088 4878 0.666913 TACTACTCTTGATCGGCCGC 59.333 55.000 23.51 8.29 0.00 6.53
4176 4970 1.227674 GATCATGTCCAGGACCGGC 60.228 63.158 17.59 0.00 0.00 6.13
4214 5008 2.365617 TCAGCATGGGTAAGCTAGCTAC 59.634 50.000 19.70 15.49 39.50 3.58
4215 5009 1.694696 AGCATGGGTAAGCTAGCTACC 59.305 52.381 19.70 22.63 39.78 3.18
4220 5014 4.855298 TGGGTAAGCTAGCTACCAAATT 57.145 40.909 28.99 14.23 35.65 1.82
4221 5015 5.187621 TGGGTAAGCTAGCTACCAAATTT 57.812 39.130 28.99 13.64 35.65 1.82
4223 5017 5.417580 TGGGTAAGCTAGCTACCAAATTTTG 59.582 40.000 28.99 1.99 35.65 2.44
4239 5033 1.961793 TTTGGGAACAGAACTCACGG 58.038 50.000 0.00 0.00 44.54 4.94
4255 5049 3.003478 GGAATTACCGACAGCGCG 58.997 61.111 0.00 0.00 35.83 6.86
4257 5051 1.343821 GAATTACCGACAGCGCGTG 59.656 57.895 8.43 7.60 35.83 5.34
4258 5052 1.349259 GAATTACCGACAGCGCGTGT 61.349 55.000 8.43 11.18 44.49 4.49
4260 5054 0.947180 ATTACCGACAGCGCGTGTTT 60.947 50.000 8.43 2.92 40.56 2.83
4262 5056 1.550659 TACCGACAGCGCGTGTTTTC 61.551 55.000 8.43 0.00 40.56 2.29
4264 5058 1.437089 CGACAGCGCGTGTTTTCTG 60.437 57.895 8.43 7.86 40.56 3.02
4266 5060 0.383124 GACAGCGCGTGTTTTCTGTC 60.383 55.000 20.94 20.94 45.50 3.51
4268 5062 0.383491 CAGCGCGTGTTTTCTGTCTG 60.383 55.000 8.43 0.00 0.00 3.51
4270 5064 0.383124 GCGCGTGTTTTCTGTCTGTC 60.383 55.000 8.43 0.00 0.00 3.51
4271 5065 0.111704 CGCGTGTTTTCTGTCTGTCG 60.112 55.000 0.00 0.00 0.00 4.35
4272 5066 1.205657 GCGTGTTTTCTGTCTGTCGA 58.794 50.000 0.00 0.00 0.00 4.20
4273 5067 1.591158 GCGTGTTTTCTGTCTGTCGAA 59.409 47.619 0.00 0.00 0.00 3.71
4274 5068 2.347661 GCGTGTTTTCTGTCTGTCGAAG 60.348 50.000 0.00 0.00 0.00 3.79
4277 5071 3.617263 GTGTTTTCTGTCTGTCGAAGTGT 59.383 43.478 0.00 0.00 0.00 3.55
4278 5072 3.863424 TGTTTTCTGTCTGTCGAAGTGTC 59.137 43.478 0.00 0.00 0.00 3.67
4491 5285 5.822519 TCACAGCACAATCTACTTCAAAAGT 59.177 36.000 0.00 0.00 45.40 2.66
4492 5286 6.318648 TCACAGCACAATCTACTTCAAAAGTT 59.681 34.615 0.00 0.00 42.81 2.66
4601 5422 0.250727 CCCAGTCCATCACCACGTTT 60.251 55.000 0.00 0.00 0.00 3.60
4663 5484 2.480073 GCACCGCGTAAGTAATGGAGTA 60.480 50.000 4.92 0.00 41.68 2.59
4694 5515 6.716898 AACTACGTCTGCTTGGTTAATTAC 57.283 37.500 0.00 0.00 0.00 1.89
4695 5516 6.034161 ACTACGTCTGCTTGGTTAATTACT 57.966 37.500 0.00 0.00 0.00 2.24
4697 5518 4.251268 ACGTCTGCTTGGTTAATTACTCC 58.749 43.478 0.00 0.00 0.00 3.85
4709 5530 9.753674 TTGGTTAATTACTCCTGATTTCTGAAT 57.246 29.630 0.00 0.00 0.00 2.57
4721 5542 4.561213 TGATTTCTGAATGCGTAGTACGTG 59.439 41.667 22.81 7.78 44.73 4.49
4738 5559 1.592110 CGTGTTGTCTGAAACTGTGCG 60.592 52.381 0.00 0.00 0.00 5.34
4739 5560 1.396996 GTGTTGTCTGAAACTGTGCGT 59.603 47.619 0.00 0.00 0.00 5.24
4740 5561 1.396648 TGTTGTCTGAAACTGTGCGTG 59.603 47.619 0.00 0.00 0.00 5.34
4741 5562 0.376852 TTGTCTGAAACTGTGCGTGC 59.623 50.000 0.00 0.00 0.00 5.34
4742 5563 1.279840 GTCTGAAACTGTGCGTGCC 59.720 57.895 0.00 0.00 0.00 5.01
4743 5564 1.146041 TCTGAAACTGTGCGTGCCT 59.854 52.632 0.00 0.00 0.00 4.75
4744 5565 0.463654 TCTGAAACTGTGCGTGCCTT 60.464 50.000 0.00 0.00 0.00 4.35
4745 5566 0.317269 CTGAAACTGTGCGTGCCTTG 60.317 55.000 0.00 0.00 0.00 3.61
4746 5567 1.658409 GAAACTGTGCGTGCCTTGC 60.658 57.895 0.00 0.00 0.00 4.01
4838 5659 8.241497 TCTAGGCTTCGTTGGATAGTTAATTA 57.759 34.615 0.00 0.00 0.00 1.40
4892 5713 3.848978 AACCCTAGGGACTGACTAACT 57.151 47.619 35.38 4.38 41.52 2.24
4907 5728 5.161358 TGACTAACTGATGAGTAAACTGCG 58.839 41.667 0.00 0.00 0.00 5.18
4914 5735 5.182570 ACTGATGAGTAAACTGCGTGTACTA 59.817 40.000 10.30 2.92 36.79 1.82
4918 5742 4.279169 TGAGTAAACTGCGTGTACTAGGTT 59.721 41.667 10.30 0.00 36.79 3.50
4931 5755 7.141363 CGTGTACTAGGTTGTAAGTTGTAACT 58.859 38.462 0.00 0.00 42.04 2.24
4973 5800 4.067972 TCACAACTAACACCCTCTGAAC 57.932 45.455 0.00 0.00 0.00 3.18
4986 5813 0.608130 TCTGAACTGCGCACATAGGT 59.392 50.000 5.66 0.00 0.00 3.08
5008 5835 5.123936 GTCCCTCGTTAATAAATGGAGCTT 58.876 41.667 0.00 0.00 0.00 3.74
5054 5881 3.890756 TGATAAACTTATCGTAGGGGCGA 59.109 43.478 5.27 0.00 41.87 5.54
5102 5931 6.155221 TCAGGCTCATTACTGAATCTACACTT 59.845 38.462 0.00 0.00 40.51 3.16
5173 6005 1.215655 CGATCGAGATCAAACGGCCC 61.216 60.000 10.26 0.00 37.69 5.80
5217 6049 1.043816 CGGGCCACTACAGAGATGAT 58.956 55.000 4.39 0.00 0.00 2.45
5315 6149 6.455360 TGTCACATTGAGCTTTCTCTTTTT 57.545 33.333 0.00 0.00 40.03 1.94
5346 6180 1.271856 TCTTCGGTGTAATGGCTCCA 58.728 50.000 0.00 0.00 0.00 3.86
5358 6192 7.722285 GGTGTAATGGCTCCATATAAAACCTAA 59.278 37.037 1.24 0.00 35.31 2.69
5366 6200 6.931840 GCTCCATATAAAACCTAAGAGTCCTG 59.068 42.308 0.00 0.00 0.00 3.86
5393 6227 4.780815 AGAGGGCATCAAATTGTAATCGA 58.219 39.130 0.58 0.00 0.00 3.59
5402 6236 8.788813 GCATCAAATTGTAATCGAGTTGTAAAG 58.211 33.333 0.00 0.00 35.37 1.85
5411 6245 1.135199 CGAGTTGTAAAGCCTAGCCGA 60.135 52.381 0.00 0.00 0.00 5.54
5412 6246 2.541556 GAGTTGTAAAGCCTAGCCGAG 58.458 52.381 0.00 0.00 0.00 4.63
5414 6248 0.539986 TTGTAAAGCCTAGCCGAGGG 59.460 55.000 4.50 0.00 46.81 4.30
5415 6249 1.335132 TGTAAAGCCTAGCCGAGGGG 61.335 60.000 4.50 0.00 46.81 4.79
5416 6250 1.047034 GTAAAGCCTAGCCGAGGGGA 61.047 60.000 4.50 0.00 46.81 4.81
5417 6251 0.759436 TAAAGCCTAGCCGAGGGGAG 60.759 60.000 4.50 0.00 46.81 4.30
5418 6252 2.531483 AAAGCCTAGCCGAGGGGAGA 62.531 60.000 4.50 0.00 46.81 3.71
5419 6253 3.228017 GCCTAGCCGAGGGGAGAC 61.228 72.222 4.50 0.00 46.81 3.36
5420 6254 2.604152 CCTAGCCGAGGGGAGACT 59.396 66.667 0.00 0.00 42.39 3.24
5421 6255 1.075896 CCTAGCCGAGGGGAGACTT 60.076 63.158 0.00 0.00 42.39 3.01
5422 6256 1.395826 CCTAGCCGAGGGGAGACTTG 61.396 65.000 0.00 0.00 42.39 3.16
5423 6257 0.684805 CTAGCCGAGGGGAGACTTGT 60.685 60.000 0.00 0.00 34.06 3.16
5424 6258 0.970937 TAGCCGAGGGGAGACTTGTG 60.971 60.000 0.00 0.00 34.06 3.33
5425 6259 2.584391 GCCGAGGGGAGACTTGTGT 61.584 63.158 0.00 0.00 34.06 3.72
5426 6260 1.293498 CCGAGGGGAGACTTGTGTG 59.707 63.158 0.00 0.00 34.06 3.82
5427 6261 1.185618 CCGAGGGGAGACTTGTGTGA 61.186 60.000 0.00 0.00 34.06 3.58
5428 6262 0.244994 CGAGGGGAGACTTGTGTGAG 59.755 60.000 0.00 0.00 0.00 3.51
5429 6263 1.633774 GAGGGGAGACTTGTGTGAGA 58.366 55.000 0.00 0.00 0.00 3.27
5430 6264 2.183679 GAGGGGAGACTTGTGTGAGAT 58.816 52.381 0.00 0.00 0.00 2.75
5431 6265 2.167487 GAGGGGAGACTTGTGTGAGATC 59.833 54.545 0.00 0.00 0.00 2.75
5432 6266 2.183679 GGGGAGACTTGTGTGAGATCT 58.816 52.381 0.00 0.00 0.00 2.75
5433 6267 2.167487 GGGGAGACTTGTGTGAGATCTC 59.833 54.545 16.21 16.21 35.99 2.75
5434 6268 2.828520 GGGAGACTTGTGTGAGATCTCA 59.171 50.000 21.67 21.67 38.03 3.27
5455 6289 6.207691 TCACATTTACGTGAGATCATGAGA 57.792 37.500 8.99 0.00 40.94 3.27
5456 6290 6.809869 TCACATTTACGTGAGATCATGAGAT 58.190 36.000 8.99 0.00 40.94 2.75
5457 6291 6.920210 TCACATTTACGTGAGATCATGAGATC 59.080 38.462 8.99 2.16 40.94 2.75
5458 6292 7.416664 TCACATTTACGTGAGATCATGAGATCA 60.417 37.037 8.99 5.02 43.74 2.92
5472 6306 7.764141 TCATGAGATCAACCTCAAAATTTCA 57.236 32.000 0.00 0.00 45.22 2.69
5473 6307 8.357290 TCATGAGATCAACCTCAAAATTTCAT 57.643 30.769 0.00 0.00 45.22 2.57
5474 6308 9.465199 TCATGAGATCAACCTCAAAATTTCATA 57.535 29.630 0.00 0.00 45.22 2.15
5518 6352 9.927668 AAAATCCGAAATTATTTGACAACATCT 57.072 25.926 0.00 0.00 0.00 2.90
5522 6356 9.173021 TCCGAAATTATTTGACAACATCTATGT 57.827 29.630 0.00 0.00 44.20 2.29
5527 6361 9.920946 AATTATTTGACAACATCTATGTAGGGT 57.079 29.630 0.00 0.00 40.80 4.34
5530 6364 8.908786 ATTTGACAACATCTATGTAGGGTATG 57.091 34.615 0.00 0.00 40.80 2.39
5531 6365 7.432148 TTGACAACATCTATGTAGGGTATGT 57.568 36.000 0.00 0.00 40.80 2.29
5532 6366 7.050970 TGACAACATCTATGTAGGGTATGTC 57.949 40.000 12.95 12.95 40.80 3.06
5533 6367 6.839134 TGACAACATCTATGTAGGGTATGTCT 59.161 38.462 17.56 0.00 40.80 3.41
5534 6368 8.002459 TGACAACATCTATGTAGGGTATGTCTA 58.998 37.037 17.56 7.52 40.80 2.59
5535 6369 8.179509 ACAACATCTATGTAGGGTATGTCTAC 57.820 38.462 0.00 0.00 40.80 2.59
5537 6371 8.638873 CAACATCTATGTAGGGTATGTCTACAA 58.361 37.037 7.83 0.00 46.61 2.41
5538 6372 8.179509 ACATCTATGTAGGGTATGTCTACAAC 57.820 38.462 7.83 0.00 46.61 3.32
5539 6373 8.005388 ACATCTATGTAGGGTATGTCTACAACT 58.995 37.037 7.83 0.00 46.61 3.16
5540 6374 8.516234 CATCTATGTAGGGTATGTCTACAACTC 58.484 40.741 7.83 0.00 46.61 3.01
5541 6375 7.002879 TCTATGTAGGGTATGTCTACAACTCC 58.997 42.308 7.83 0.00 46.61 3.85
5542 6376 3.949754 TGTAGGGTATGTCTACAACTCCG 59.050 47.826 0.00 0.00 42.59 4.63
5543 6377 3.377253 AGGGTATGTCTACAACTCCGA 57.623 47.619 0.00 0.00 0.00 4.55
5544 6378 3.288964 AGGGTATGTCTACAACTCCGAG 58.711 50.000 0.00 0.00 0.00 4.63
5545 6379 3.053842 AGGGTATGTCTACAACTCCGAGA 60.054 47.826 1.33 0.00 0.00 4.04
5546 6380 3.698040 GGGTATGTCTACAACTCCGAGAA 59.302 47.826 1.33 0.00 0.00 2.87
5547 6381 4.159135 GGGTATGTCTACAACTCCGAGAAA 59.841 45.833 1.33 0.00 0.00 2.52
5548 6382 5.337009 GGGTATGTCTACAACTCCGAGAAAA 60.337 44.000 1.33 0.00 0.00 2.29
5549 6383 6.338937 GGTATGTCTACAACTCCGAGAAAAT 58.661 40.000 1.33 0.00 0.00 1.82
5550 6384 6.817140 GGTATGTCTACAACTCCGAGAAAATT 59.183 38.462 1.33 0.00 0.00 1.82
5551 6385 6.969828 ATGTCTACAACTCCGAGAAAATTC 57.030 37.500 1.33 0.00 0.00 2.17
5552 6386 5.849510 TGTCTACAACTCCGAGAAAATTCA 58.150 37.500 1.33 0.00 0.00 2.57
5553 6387 5.926542 TGTCTACAACTCCGAGAAAATTCAG 59.073 40.000 1.33 0.00 0.00 3.02
5554 6388 4.929808 TCTACAACTCCGAGAAAATTCAGC 59.070 41.667 1.33 0.00 0.00 4.26
5555 6389 3.744660 ACAACTCCGAGAAAATTCAGCT 58.255 40.909 1.33 0.00 0.00 4.24
5556 6390 3.748568 ACAACTCCGAGAAAATTCAGCTC 59.251 43.478 1.33 0.00 0.00 4.09
5557 6391 3.685139 ACTCCGAGAAAATTCAGCTCA 57.315 42.857 1.33 0.00 0.00 4.26
5558 6392 4.008074 ACTCCGAGAAAATTCAGCTCAA 57.992 40.909 1.33 0.00 0.00 3.02
5559 6393 4.389374 ACTCCGAGAAAATTCAGCTCAAA 58.611 39.130 1.33 0.00 0.00 2.69
5560 6394 4.821805 ACTCCGAGAAAATTCAGCTCAAAA 59.178 37.500 1.33 0.00 0.00 2.44
5561 6395 5.108385 TCCGAGAAAATTCAGCTCAAAAC 57.892 39.130 0.00 0.00 0.00 2.43
5562 6396 4.821805 TCCGAGAAAATTCAGCTCAAAACT 59.178 37.500 0.00 0.00 0.00 2.66
5563 6397 5.049405 TCCGAGAAAATTCAGCTCAAAACTC 60.049 40.000 0.00 0.00 0.00 3.01
5564 6398 5.277974 CCGAGAAAATTCAGCTCAAAACTCA 60.278 40.000 0.00 0.00 0.00 3.41
5565 6399 6.201517 CGAGAAAATTCAGCTCAAAACTCAA 58.798 36.000 0.00 0.00 0.00 3.02
5566 6400 6.860023 CGAGAAAATTCAGCTCAAAACTCAAT 59.140 34.615 0.00 0.00 0.00 2.57
5567 6401 7.149015 CGAGAAAATTCAGCTCAAAACTCAATG 60.149 37.037 0.00 0.00 0.00 2.82
5568 6402 7.495055 AGAAAATTCAGCTCAAAACTCAATGT 58.505 30.769 0.00 0.00 0.00 2.71
5569 6403 8.632679 AGAAAATTCAGCTCAAAACTCAATGTA 58.367 29.630 0.00 0.00 0.00 2.29
5570 6404 8.579682 AAAATTCAGCTCAAAACTCAATGTAC 57.420 30.769 0.00 0.00 0.00 2.90
5571 6405 6.882610 ATTCAGCTCAAAACTCAATGTACA 57.117 33.333 0.00 0.00 0.00 2.90
5572 6406 6.882610 TTCAGCTCAAAACTCAATGTACAT 57.117 33.333 1.41 1.41 0.00 2.29
5573 6407 6.882610 TCAGCTCAAAACTCAATGTACATT 57.117 33.333 15.47 15.47 0.00 2.71
5574 6408 7.275888 TCAGCTCAAAACTCAATGTACATTT 57.724 32.000 18.50 1.75 0.00 2.32
5575 6409 7.140705 TCAGCTCAAAACTCAATGTACATTTG 58.859 34.615 18.50 15.67 0.00 2.32
5576 6410 6.364165 CAGCTCAAAACTCAATGTACATTTGG 59.636 38.462 18.50 15.27 29.59 3.28
5577 6411 5.634859 GCTCAAAACTCAATGTACATTTGGG 59.365 40.000 18.50 14.35 31.16 4.12
5578 6412 6.095432 TCAAAACTCAATGTACATTTGGGG 57.905 37.500 18.50 10.92 29.59 4.96
5579 6413 5.835819 TCAAAACTCAATGTACATTTGGGGA 59.164 36.000 18.50 11.52 29.59 4.81
5580 6414 6.496565 TCAAAACTCAATGTACATTTGGGGAT 59.503 34.615 18.50 0.70 29.59 3.85
5581 6415 6.933514 AAACTCAATGTACATTTGGGGATT 57.066 33.333 18.50 6.89 0.00 3.01
5582 6416 6.530019 AACTCAATGTACATTTGGGGATTC 57.470 37.500 18.50 0.00 0.00 2.52
5583 6417 4.956075 ACTCAATGTACATTTGGGGATTCC 59.044 41.667 18.50 0.00 0.00 3.01
5584 6418 4.940483 TCAATGTACATTTGGGGATTCCA 58.060 39.130 18.50 0.00 45.43 3.53
5598 6432 6.872920 TGGGGATTCCAAAAAGATAAATTCG 58.127 36.000 4.80 0.00 43.84 3.34
5599 6433 6.665680 TGGGGATTCCAAAAAGATAAATTCGA 59.334 34.615 4.80 0.00 43.84 3.71
5600 6434 7.179338 TGGGGATTCCAAAAAGATAAATTCGAA 59.821 33.333 0.00 0.00 43.84 3.71
5601 6435 8.204160 GGGGATTCCAAAAAGATAAATTCGAAT 58.796 33.333 4.39 4.39 35.00 3.34
5602 6436 9.034544 GGGATTCCAAAAAGATAAATTCGAATG 57.965 33.333 12.25 0.00 0.00 2.67
5603 6437 9.586435 GGATTCCAAAAAGATAAATTCGAATGT 57.414 29.630 12.25 8.99 0.00 2.71
5606 6440 9.973450 TTCCAAAAAGATAAATTCGAATGTGAA 57.027 25.926 12.25 0.00 0.00 3.18
5614 6448 9.599866 AGATAAATTCGAATGTGAATAGTGACA 57.400 29.630 12.25 0.00 37.59 3.58
5616 6450 9.988350 ATAAATTCGAATGTGAATAGTGACAAC 57.012 29.630 12.25 0.00 37.59 3.32
5617 6451 7.672983 AATTCGAATGTGAATAGTGACAACT 57.327 32.000 12.25 0.00 37.59 3.16
5618 6452 7.672983 ATTCGAATGTGAATAGTGACAACTT 57.327 32.000 10.50 0.00 36.83 2.66
5619 6453 7.490962 TTCGAATGTGAATAGTGACAACTTT 57.509 32.000 0.00 0.00 37.88 2.66
5620 6454 7.490962 TCGAATGTGAATAGTGACAACTTTT 57.509 32.000 0.00 0.00 37.88 2.27
5621 6455 7.351981 TCGAATGTGAATAGTGACAACTTTTG 58.648 34.615 0.00 0.00 37.88 2.44
5622 6456 6.578545 CGAATGTGAATAGTGACAACTTTTGG 59.421 38.462 0.00 0.00 37.88 3.28
5623 6457 6.959639 ATGTGAATAGTGACAACTTTTGGT 57.040 33.333 0.00 0.00 37.88 3.67
5624 6458 6.130298 TGTGAATAGTGACAACTTTTGGTG 57.870 37.500 0.00 0.00 44.21 4.17
5625 6459 5.883115 TGTGAATAGTGACAACTTTTGGTGA 59.117 36.000 0.00 0.00 40.19 4.02
5626 6460 6.375736 TGTGAATAGTGACAACTTTTGGTGAA 59.624 34.615 0.00 0.00 40.19 3.18
5627 6461 7.068103 TGTGAATAGTGACAACTTTTGGTGAAT 59.932 33.333 0.00 0.00 40.19 2.57
5628 6462 8.564574 GTGAATAGTGACAACTTTTGGTGAATA 58.435 33.333 0.00 0.00 40.19 1.75
5629 6463 8.783093 TGAATAGTGACAACTTTTGGTGAATAG 58.217 33.333 0.00 0.00 40.19 1.73
5630 6464 8.691661 AATAGTGACAACTTTTGGTGAATAGT 57.308 30.769 0.00 0.00 40.19 2.12
5631 6465 9.787435 AATAGTGACAACTTTTGGTGAATAGTA 57.213 29.630 0.00 0.00 40.19 1.82
5632 6466 7.492352 AGTGACAACTTTTGGTGAATAGTAC 57.508 36.000 0.00 0.00 40.19 2.73
5633 6467 7.280356 AGTGACAACTTTTGGTGAATAGTACT 58.720 34.615 0.00 0.00 40.19 2.73
5634 6468 7.773690 AGTGACAACTTTTGGTGAATAGTACTT 59.226 33.333 0.00 0.00 40.19 2.24
5635 6469 8.403236 GTGACAACTTTTGGTGAATAGTACTTT 58.597 33.333 0.00 0.00 40.19 2.66
5636 6470 8.962679 TGACAACTTTTGGTGAATAGTACTTTT 58.037 29.630 0.00 0.00 40.19 2.27
5695 6529 9.793252 CTTTCTATTAATGTGAGTTGAATTGGG 57.207 33.333 0.00 0.00 0.00 4.12
5696 6530 9.527157 TTTCTATTAATGTGAGTTGAATTGGGA 57.473 29.630 0.00 0.00 0.00 4.37
5697 6531 8.737168 TCTATTAATGTGAGTTGAATTGGGAG 57.263 34.615 0.00 0.00 0.00 4.30
5698 6532 8.328758 TCTATTAATGTGAGTTGAATTGGGAGT 58.671 33.333 0.00 0.00 0.00 3.85
5699 6533 7.781324 ATTAATGTGAGTTGAATTGGGAGTT 57.219 32.000 0.00 0.00 0.00 3.01
5700 6534 5.458041 AATGTGAGTTGAATTGGGAGTTG 57.542 39.130 0.00 0.00 0.00 3.16
5701 6535 4.163441 TGTGAGTTGAATTGGGAGTTGA 57.837 40.909 0.00 0.00 0.00 3.18
5702 6536 4.531854 TGTGAGTTGAATTGGGAGTTGAA 58.468 39.130 0.00 0.00 0.00 2.69
5703 6537 4.952957 TGTGAGTTGAATTGGGAGTTGAAA 59.047 37.500 0.00 0.00 0.00 2.69
5704 6538 5.163561 TGTGAGTTGAATTGGGAGTTGAAAC 60.164 40.000 0.00 0.00 0.00 2.78
5705 6539 5.067805 GTGAGTTGAATTGGGAGTTGAAACT 59.932 40.000 0.00 0.00 43.16 2.66
5706 6540 5.656416 TGAGTTGAATTGGGAGTTGAAACTT 59.344 36.000 0.00 0.00 39.88 2.66
5707 6541 6.154363 TGAGTTGAATTGGGAGTTGAAACTTT 59.846 34.615 0.00 0.00 39.88 2.66
5708 6542 6.946340 AGTTGAATTGGGAGTTGAAACTTTT 58.054 32.000 0.00 0.00 39.88 2.27
5709 6543 7.041721 AGTTGAATTGGGAGTTGAAACTTTTC 58.958 34.615 0.00 0.00 39.88 2.29
5710 6544 5.587289 TGAATTGGGAGTTGAAACTTTTCG 58.413 37.500 0.00 0.00 39.88 3.46
5711 6545 4.584327 ATTGGGAGTTGAAACTTTTCGG 57.416 40.909 0.00 0.00 39.88 4.30
5712 6546 2.303175 TGGGAGTTGAAACTTTTCGGG 58.697 47.619 0.00 0.00 39.88 5.14
5713 6547 1.611977 GGGAGTTGAAACTTTTCGGGG 59.388 52.381 0.00 0.00 39.88 5.73
5714 6548 1.611977 GGAGTTGAAACTTTTCGGGGG 59.388 52.381 0.00 0.00 39.88 5.40
5715 6549 1.000607 GAGTTGAAACTTTTCGGGGGC 60.001 52.381 0.00 0.00 39.88 5.80
5716 6550 0.747852 GTTGAAACTTTTCGGGGGCA 59.252 50.000 0.00 0.00 40.01 5.36
5717 6551 1.343142 GTTGAAACTTTTCGGGGGCAT 59.657 47.619 0.00 0.00 40.01 4.40
5718 6552 2.559231 GTTGAAACTTTTCGGGGGCATA 59.441 45.455 0.00 0.00 40.01 3.14
5719 6553 2.164338 TGAAACTTTTCGGGGGCATAC 58.836 47.619 0.00 0.00 40.01 2.39
5720 6554 2.164338 GAAACTTTTCGGGGGCATACA 58.836 47.619 0.00 0.00 0.00 2.29
5721 6555 2.525105 AACTTTTCGGGGGCATACAT 57.475 45.000 0.00 0.00 0.00 2.29
5722 6556 2.052782 ACTTTTCGGGGGCATACATC 57.947 50.000 0.00 0.00 0.00 3.06
5723 6557 1.283613 ACTTTTCGGGGGCATACATCA 59.716 47.619 0.00 0.00 0.00 3.07
5724 6558 2.291282 ACTTTTCGGGGGCATACATCAA 60.291 45.455 0.00 0.00 0.00 2.57
5725 6559 2.516227 TTTCGGGGGCATACATCAAA 57.484 45.000 0.00 0.00 0.00 2.69
5726 6560 1.757682 TTCGGGGGCATACATCAAAC 58.242 50.000 0.00 0.00 0.00 2.93
5727 6561 0.621082 TCGGGGGCATACATCAAACA 59.379 50.000 0.00 0.00 0.00 2.83
5728 6562 1.214175 TCGGGGGCATACATCAAACAT 59.786 47.619 0.00 0.00 0.00 2.71
5729 6563 2.031120 CGGGGGCATACATCAAACATT 58.969 47.619 0.00 0.00 0.00 2.71
5730 6564 2.223782 CGGGGGCATACATCAAACATTG 60.224 50.000 0.00 0.00 0.00 2.82
5731 6565 3.030291 GGGGGCATACATCAAACATTGA 58.970 45.455 0.00 0.00 45.01 2.57
5814 6648 6.410942 TCACATAGATCTCACCTAATGTGG 57.589 41.667 24.01 12.30 45.48 4.17
5824 6658 5.353394 TCACCTAATGTGGGATCTTACAC 57.647 43.478 5.01 6.73 45.48 2.90
5829 6663 2.489938 TGTGGGATCTTACACAAGGC 57.510 50.000 13.40 0.00 43.91 4.35
5830 6664 1.985159 TGTGGGATCTTACACAAGGCT 59.015 47.619 13.40 0.00 43.91 4.58
5831 6665 2.027192 TGTGGGATCTTACACAAGGCTC 60.027 50.000 13.40 0.00 43.91 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 85 2.099263 TGCTTAGTAGTCGTCATGGCTC 59.901 50.000 0.00 0.00 0.00 4.70
137 145 4.327357 ACGCAACTCTAGAATTGTTGATCG 59.673 41.667 21.36 18.08 42.35 3.69
146 154 7.336161 AGAATAGTACACGCAACTCTAGAAT 57.664 36.000 0.00 0.00 0.00 2.40
149 157 7.695820 ACTTAGAATAGTACACGCAACTCTAG 58.304 38.462 0.00 0.00 0.00 2.43
152 160 5.451662 CGACTTAGAATAGTACACGCAACTC 59.548 44.000 0.00 0.00 0.00 3.01
267 277 1.209019 ACAATCTCATGAGCCGCTCTT 59.791 47.619 20.87 12.23 0.00 2.85
317 795 7.506261 ACCTCGACCTTGTATGAAGATTACTAT 59.494 37.037 0.00 0.00 0.00 2.12
363 841 8.668653 TCCTTGGGATTGCTTCATAATAGATTA 58.331 33.333 0.00 0.00 0.00 1.75
415 893 3.892588 TCCTACATGGGTTGTTTGTTTCC 59.107 43.478 0.00 0.00 39.87 3.13
507 985 4.022676 GGTCTCTTTTTATTTGCGGGTGAA 60.023 41.667 0.00 0.00 0.00 3.18
508 986 3.504520 GGTCTCTTTTTATTTGCGGGTGA 59.495 43.478 0.00 0.00 0.00 4.02
509 987 3.506067 AGGTCTCTTTTTATTTGCGGGTG 59.494 43.478 0.00 0.00 0.00 4.61
510 988 3.763057 AGGTCTCTTTTTATTTGCGGGT 58.237 40.909 0.00 0.00 0.00 5.28
511 989 5.890424 TTAGGTCTCTTTTTATTTGCGGG 57.110 39.130 0.00 0.00 0.00 6.13
512 990 7.865889 ACTTTTTAGGTCTCTTTTTATTTGCGG 59.134 33.333 0.00 0.00 0.00 5.69
513 991 8.797266 ACTTTTTAGGTCTCTTTTTATTTGCG 57.203 30.769 0.00 0.00 0.00 4.85
519 997 9.689501 TGGAAGAACTTTTTAGGTCTCTTTTTA 57.310 29.630 0.00 0.00 0.00 1.52
520 998 8.589701 TGGAAGAACTTTTTAGGTCTCTTTTT 57.410 30.769 0.00 0.00 0.00 1.94
521 999 8.589701 TTGGAAGAACTTTTTAGGTCTCTTTT 57.410 30.769 0.00 0.00 0.00 2.27
522 1000 8.768501 ATTGGAAGAACTTTTTAGGTCTCTTT 57.231 30.769 0.00 0.00 0.00 2.52
523 1001 9.508642 CTATTGGAAGAACTTTTTAGGTCTCTT 57.491 33.333 0.00 0.00 0.00 2.85
524 1002 8.881262 TCTATTGGAAGAACTTTTTAGGTCTCT 58.119 33.333 0.00 0.00 0.00 3.10
525 1003 9.674068 ATCTATTGGAAGAACTTTTTAGGTCTC 57.326 33.333 0.00 0.00 0.00 3.36
910 1523 4.771054 CCGTTTCTAGGTAGGTGCCTATAT 59.229 45.833 0.83 0.00 40.07 0.86
911 1524 4.147321 CCGTTTCTAGGTAGGTGCCTATA 58.853 47.826 0.83 0.00 40.07 1.31
912 1525 2.963782 CCGTTTCTAGGTAGGTGCCTAT 59.036 50.000 0.83 0.00 40.07 2.57
913 1526 2.381911 CCGTTTCTAGGTAGGTGCCTA 58.618 52.381 0.00 0.00 39.94 3.93
914 1527 1.192428 CCGTTTCTAGGTAGGTGCCT 58.808 55.000 0.00 0.00 42.43 4.75
915 1528 0.461516 GCCGTTTCTAGGTAGGTGCC 60.462 60.000 0.00 0.00 0.00 5.01
916 1529 0.248289 TGCCGTTTCTAGGTAGGTGC 59.752 55.000 0.00 0.00 0.00 5.01
917 1530 1.405121 GGTGCCGTTTCTAGGTAGGTG 60.405 57.143 0.00 0.00 0.00 4.00
918 1531 0.900421 GGTGCCGTTTCTAGGTAGGT 59.100 55.000 0.00 0.00 0.00 3.08
919 1532 0.179119 CGGTGCCGTTTCTAGGTAGG 60.179 60.000 1.93 0.00 34.35 3.18
921 1534 1.255882 TTCGGTGCCGTTTCTAGGTA 58.744 50.000 10.60 0.00 40.74 3.08
925 1538 1.219646 GTGTTTCGGTGCCGTTTCTA 58.780 50.000 10.60 0.00 40.74 2.10
950 1563 1.003545 CAACTCACAACTCACAAGCGG 60.004 52.381 0.00 0.00 0.00 5.52
1422 2101 1.604755 GATATCTGCACGACGAGGTCT 59.395 52.381 0.00 0.00 0.00 3.85
1536 2215 3.423154 CTCGCTGAAACCGCCACC 61.423 66.667 0.00 0.00 0.00 4.61
1806 2488 0.248661 CCTGCCACACTATCGAGACG 60.249 60.000 0.00 0.00 0.00 4.18
1868 2550 2.366469 AGGATCGCCTGTGTCTGTT 58.634 52.632 0.00 0.00 44.90 3.16
1892 2574 3.189910 CACAATTCACAGGGATGAGTGTG 59.810 47.826 7.05 7.05 44.59 3.82
1910 2592 3.117550 AGGGTATGCATATGCCTTCACAA 60.118 43.478 24.54 4.62 38.91 3.33
1911 2593 2.442878 AGGGTATGCATATGCCTTCACA 59.557 45.455 24.54 5.39 38.91 3.58
1912 2594 3.146104 AGGGTATGCATATGCCTTCAC 57.854 47.619 24.54 13.88 38.91 3.18
1913 2595 5.519183 AATAGGGTATGCATATGCCTTCA 57.481 39.130 24.54 6.57 38.91 3.02
1914 2596 6.840780 AAAATAGGGTATGCATATGCCTTC 57.159 37.500 24.54 12.62 38.91 3.46
1916 2598 8.115384 TCATAAAAATAGGGTATGCATATGCCT 58.885 33.333 24.54 17.41 38.91 4.75
1917 2599 8.292444 TCATAAAAATAGGGTATGCATATGCC 57.708 34.615 24.54 9.45 41.18 4.40
1918 2600 7.917505 GCTCATAAAAATAGGGTATGCATATGC 59.082 37.037 21.09 21.09 42.50 3.14
1919 2601 8.959548 TGCTCATAAAAATAGGGTATGCATATG 58.040 33.333 10.16 0.00 0.00 1.78
1920 2602 8.960591 GTGCTCATAAAAATAGGGTATGCATAT 58.039 33.333 10.16 0.00 0.00 1.78
1921 2603 7.393234 GGTGCTCATAAAAATAGGGTATGCATA 59.607 37.037 1.16 1.16 0.00 3.14
1922 2604 6.209391 GGTGCTCATAAAAATAGGGTATGCAT 59.791 38.462 3.79 3.79 0.00 3.96
1923 2605 5.534654 GGTGCTCATAAAAATAGGGTATGCA 59.465 40.000 0.00 0.00 0.00 3.96
1927 2609 5.454187 CGGAGGTGCTCATAAAAATAGGGTA 60.454 44.000 0.00 0.00 31.08 3.69
1937 2619 2.832129 AGTCTTTCGGAGGTGCTCATAA 59.168 45.455 0.00 0.00 31.08 1.90
1962 2644 2.666862 TACGCCACTGTTTGCCGG 60.667 61.111 0.00 0.00 0.00 6.13
1964 2646 0.672401 TAGCTACGCCACTGTTTGCC 60.672 55.000 0.00 0.00 0.00 4.52
1966 2648 0.721718 GCTAGCTACGCCACTGTTTG 59.278 55.000 7.70 0.00 0.00 2.93
1967 2649 0.391263 GGCTAGCTACGCCACTGTTT 60.391 55.000 22.05 0.00 46.77 2.83
1968 2650 1.218316 GGCTAGCTACGCCACTGTT 59.782 57.895 22.05 0.00 46.77 3.16
1969 2651 2.893398 GGCTAGCTACGCCACTGT 59.107 61.111 22.05 0.00 46.77 3.55
1974 2656 1.146263 ATGTTGGGCTAGCTACGCC 59.854 57.895 15.72 19.98 46.83 5.68
1975 2657 1.776034 GCATGTTGGGCTAGCTACGC 61.776 60.000 15.72 6.93 0.00 4.42
1976 2658 1.160329 GGCATGTTGGGCTAGCTACG 61.160 60.000 15.72 1.04 0.00 3.51
1977 2659 0.107214 TGGCATGTTGGGCTAGCTAC 60.107 55.000 15.72 10.98 0.00 3.58
1978 2660 0.181114 CTGGCATGTTGGGCTAGCTA 59.819 55.000 15.72 0.96 33.06 3.32
1979 2661 1.077212 CTGGCATGTTGGGCTAGCT 60.077 57.895 15.72 0.00 33.06 3.32
1980 2662 2.123428 CCTGGCATGTTGGGCTAGC 61.123 63.158 6.04 6.04 38.40 3.42
1981 2663 1.454479 CCCTGGCATGTTGGGCTAG 60.454 63.158 6.83 0.00 39.31 3.42
1982 2664 2.237965 ACCCTGGCATGTTGGGCTA 61.238 57.895 16.24 0.00 44.56 3.93
1983 2665 3.593680 ACCCTGGCATGTTGGGCT 61.594 61.111 16.24 5.04 44.56 5.19
1984 2666 3.384532 CACCCTGGCATGTTGGGC 61.385 66.667 16.24 0.00 44.56 5.36
1985 2667 2.681064 CCACCCTGGCATGTTGGG 60.681 66.667 15.17 15.17 46.07 4.12
1986 2668 1.978617 GACCACCCTGGCATGTTGG 60.979 63.158 4.83 4.83 42.67 3.77
1987 2669 1.978617 GGACCACCCTGGCATGTTG 60.979 63.158 0.00 0.00 42.67 3.33
1988 2670 2.440599 GGACCACCCTGGCATGTT 59.559 61.111 0.00 0.00 42.67 2.71
1989 2671 2.858476 TGGACCACCCTGGCATGT 60.858 61.111 0.00 0.00 42.67 3.21
1990 2672 2.361610 GTGGACCACCCTGGCATG 60.362 66.667 14.16 0.00 42.67 4.06
2000 2682 4.529769 TGAATATTTTGCATTGGTGGACCA 59.470 37.500 0.00 0.00 45.94 4.02
2001 2683 4.869861 GTGAATATTTTGCATTGGTGGACC 59.130 41.667 0.00 0.00 0.00 4.46
2002 2684 5.477510 TGTGAATATTTTGCATTGGTGGAC 58.522 37.500 0.00 0.00 0.00 4.02
2003 2685 5.735285 TGTGAATATTTTGCATTGGTGGA 57.265 34.783 0.00 0.00 0.00 4.02
2004 2686 8.489990 TTTATGTGAATATTTTGCATTGGTGG 57.510 30.769 0.00 0.00 0.00 4.61
2065 2747 9.067963 TGGAATTTCCCCATAATCTATATAGCA 57.932 33.333 12.90 0.00 35.03 3.49
2066 2748 9.566432 CTGGAATTTCCCCATAATCTATATAGC 57.434 37.037 12.90 0.00 35.03 2.97
2068 2750 9.014049 CCCTGGAATTTCCCCATAATCTATATA 57.986 37.037 12.90 0.00 35.03 0.86
2069 2751 7.468830 ACCCTGGAATTTCCCCATAATCTATAT 59.531 37.037 12.90 0.00 35.03 0.86
2070 2752 6.802660 ACCCTGGAATTTCCCCATAATCTATA 59.197 38.462 12.90 0.00 35.03 1.31
2071 2753 5.621329 ACCCTGGAATTTCCCCATAATCTAT 59.379 40.000 12.90 0.00 35.03 1.98
2072 2754 4.988221 ACCCTGGAATTTCCCCATAATCTA 59.012 41.667 12.90 0.00 35.03 1.98
2073 2755 3.799578 ACCCTGGAATTTCCCCATAATCT 59.200 43.478 12.90 0.00 35.03 2.40
2074 2756 3.897505 CACCCTGGAATTTCCCCATAATC 59.102 47.826 12.90 0.00 35.03 1.75
2075 2757 3.375207 CCACCCTGGAATTTCCCCATAAT 60.375 47.826 12.90 0.00 40.96 1.28
2076 2758 2.023501 CCACCCTGGAATTTCCCCATAA 60.024 50.000 12.90 0.00 40.96 1.90
2077 2759 1.573376 CCACCCTGGAATTTCCCCATA 59.427 52.381 12.90 0.00 40.96 2.74
2078 2760 0.339510 CCACCCTGGAATTTCCCCAT 59.660 55.000 12.90 0.00 40.96 4.00
2079 2761 1.077298 ACCACCCTGGAATTTCCCCA 61.077 55.000 12.90 0.00 40.96 4.96
2080 2762 0.324368 GACCACCCTGGAATTTCCCC 60.324 60.000 12.90 0.00 40.96 4.81
2081 2763 0.324368 GGACCACCCTGGAATTTCCC 60.324 60.000 12.90 0.00 40.96 3.97
2082 2764 0.407918 TGGACCACCCTGGAATTTCC 59.592 55.000 8.59 8.59 40.96 3.13
2083 2765 2.102578 CATGGACCACCCTGGAATTTC 58.897 52.381 0.00 0.00 40.96 2.17
2084 2766 2.236489 CATGGACCACCCTGGAATTT 57.764 50.000 0.00 0.00 40.96 1.82
2104 2786 3.647771 GGGGTGGACAGGGTGGTC 61.648 72.222 0.00 0.00 37.06 4.02
2106 2788 3.572715 TAGGGGGTGGACAGGGTGG 62.573 68.421 0.00 0.00 0.00 4.61
2107 2789 1.995626 CTAGGGGGTGGACAGGGTG 60.996 68.421 0.00 0.00 0.00 4.61
2108 2790 1.537478 ATCTAGGGGGTGGACAGGGT 61.537 60.000 0.00 0.00 0.00 4.34
2109 2791 0.566176 TATCTAGGGGGTGGACAGGG 59.434 60.000 0.00 0.00 0.00 4.45
2110 2792 1.718280 GTATCTAGGGGGTGGACAGG 58.282 60.000 0.00 0.00 0.00 4.00
2111 2793 1.329256 CGTATCTAGGGGGTGGACAG 58.671 60.000 0.00 0.00 0.00 3.51
2112 2794 0.757935 GCGTATCTAGGGGGTGGACA 60.758 60.000 0.00 0.00 0.00 4.02
2113 2795 1.470165 GGCGTATCTAGGGGGTGGAC 61.470 65.000 0.00 0.00 0.00 4.02
2114 2796 1.152398 GGCGTATCTAGGGGGTGGA 60.152 63.158 0.00 0.00 0.00 4.02
2115 2797 1.458777 TGGCGTATCTAGGGGGTGG 60.459 63.158 0.00 0.00 0.00 4.61
2116 2798 0.759436 AGTGGCGTATCTAGGGGGTG 60.759 60.000 0.00 0.00 0.00 4.61
2117 2799 0.759436 CAGTGGCGTATCTAGGGGGT 60.759 60.000 0.00 0.00 0.00 4.95
2118 2800 2.050269 CAGTGGCGTATCTAGGGGG 58.950 63.158 0.00 0.00 0.00 5.40
2119 2801 1.367840 GCAGTGGCGTATCTAGGGG 59.632 63.158 0.00 0.00 0.00 4.79
2120 2802 1.367840 GGCAGTGGCGTATCTAGGG 59.632 63.158 0.00 0.00 42.47 3.53
2121 2803 1.007271 CGGCAGTGGCGTATCTAGG 60.007 63.158 29.14 0.00 46.33 3.02
2122 2804 4.635925 CGGCAGTGGCGTATCTAG 57.364 61.111 29.14 0.77 46.33 2.43
2131 2813 0.247185 AAATGATTTGCCGGCAGTGG 59.753 50.000 30.75 0.00 0.00 4.00
2132 2814 1.727880 CAAAATGATTTGCCGGCAGTG 59.272 47.619 30.75 13.96 39.50 3.66
2133 2815 1.617850 TCAAAATGATTTGCCGGCAGT 59.382 42.857 30.75 22.46 44.52 4.40
2134 2816 2.367030 TCAAAATGATTTGCCGGCAG 57.633 45.000 30.75 14.84 44.52 4.85
2135 2817 2.827800 TTCAAAATGATTTGCCGGCA 57.172 40.000 29.03 29.03 44.52 5.69
2149 2831 9.474920 GTCTGTGGTGATTTTATCAATTTCAAA 57.525 29.630 0.00 0.00 41.69 2.69
2154 2836 6.721208 AGGTGTCTGTGGTGATTTTATCAATT 59.279 34.615 0.00 0.00 41.69 2.32
2164 2846 1.819288 CTACGAGGTGTCTGTGGTGAT 59.181 52.381 0.00 0.00 0.00 3.06
2211 2895 1.512926 AGATTTCCGGCGATACATGC 58.487 50.000 9.30 0.00 0.00 4.06
2214 2898 2.971660 TCAAGATTTCCGGCGATACA 57.028 45.000 9.30 0.00 0.00 2.29
2244 2928 9.031360 GTTCAAGTTCTGATGCTCGTATTATTA 57.969 33.333 0.00 0.00 32.78 0.98
2245 2929 7.011482 GGTTCAAGTTCTGATGCTCGTATTATT 59.989 37.037 0.00 0.00 32.78 1.40
2251 2935 2.417719 GGTTCAAGTTCTGATGCTCGT 58.582 47.619 0.00 0.00 32.78 4.18
2258 2942 2.038557 GCCACTAGGGTTCAAGTTCTGA 59.961 50.000 0.00 0.00 39.65 3.27
2262 2946 1.073923 CAGGCCACTAGGGTTCAAGTT 59.926 52.381 5.01 0.00 39.65 2.66
2274 2958 2.768344 CGGTATCCCCAGGCCACT 60.768 66.667 5.01 0.00 0.00 4.00
2275 2959 4.564110 GCGGTATCCCCAGGCCAC 62.564 72.222 5.01 0.00 0.00 5.01
2279 2963 3.925090 GACGGCGGTATCCCCAGG 61.925 72.222 13.24 0.00 0.00 4.45
2293 2977 1.067425 TGGTTAGGTGAATCGTGGACG 60.067 52.381 0.00 0.00 41.45 4.79
2301 2985 5.772393 TGTGGTTAGATGGTTAGGTGAAT 57.228 39.130 0.00 0.00 0.00 2.57
2340 3024 7.459795 TTGAATATATGTCAGCACCAAAACA 57.540 32.000 0.00 0.00 0.00 2.83
2361 3045 5.430886 CCATCATGTCATACCAGTCTTTGA 58.569 41.667 0.00 0.00 0.00 2.69
2467 3154 9.129209 GACATAGCAAAAGAAATCTACCAAAAC 57.871 33.333 0.00 0.00 0.00 2.43
2604 3292 2.434884 CATGAGGCAGGCGTCGTT 60.435 61.111 5.99 0.00 33.98 3.85
2659 3347 2.907897 CTTGATGACTCCCCGTCCGC 62.908 65.000 0.00 0.00 42.13 5.54
2668 3356 1.667724 CGATGTTGGCCTTGATGACTC 59.332 52.381 3.32 0.00 0.00 3.36
2709 3412 0.759959 TGTACCCGTGGCTCTTTCAA 59.240 50.000 0.00 0.00 0.00 2.69
2724 3427 7.923414 AATAATGGAGGTTTGACTCTTGTAC 57.077 36.000 0.00 0.00 37.63 2.90
2770 3473 2.758327 ACATCGCTACGGCCTCCA 60.758 61.111 0.00 0.00 34.44 3.86
2800 3503 1.729284 TTATCGTTTGGTTCTCCGGC 58.271 50.000 0.00 0.00 36.30 6.13
2804 3507 5.001874 ACTTCCCTTTATCGTTTGGTTCTC 58.998 41.667 0.00 0.00 0.00 2.87
2806 3509 4.142966 CGACTTCCCTTTATCGTTTGGTTC 60.143 45.833 0.00 0.00 0.00 3.62
2884 3588 2.936498 CTCGATGGCGTATTTTCAGGTT 59.064 45.455 0.00 0.00 38.98 3.50
2909 3613 1.873863 TCGTCTACGACTGTGCCAG 59.126 57.895 0.14 1.16 44.22 4.85
2910 3614 4.068280 TCGTCTACGACTGTGCCA 57.932 55.556 0.14 0.00 44.22 4.92
2930 3634 0.895530 GAGTCTCCCCATCACAACGA 59.104 55.000 0.00 0.00 0.00 3.85
2964 3668 2.644418 GTTGACGCCAAGCATGCA 59.356 55.556 21.98 0.00 32.06 3.96
2967 3671 2.945984 CACGTTGACGCCAAGCAT 59.054 55.556 3.05 0.00 44.43 3.79
2968 3672 3.947841 GCACGTTGACGCCAAGCA 61.948 61.111 3.05 0.00 44.43 3.91
3053 3760 7.923878 TCCTTTATTTACAAGACCTTTTTGCAC 59.076 33.333 0.00 0.00 0.00 4.57
3115 3823 5.244402 TGATGTCAAACAGATGCATTCCTTT 59.756 36.000 0.00 0.00 0.00 3.11
3189 3903 2.151202 GTGGCCTCGAGACATCAAAAA 58.849 47.619 15.71 0.00 0.00 1.94
3224 3938 8.786898 GTGAAAGCTATATTGCATTGGATTCTA 58.213 33.333 11.72 0.00 34.99 2.10
3225 3939 7.255730 GGTGAAAGCTATATTGCATTGGATTCT 60.256 37.037 11.72 0.00 34.99 2.40
3244 3958 5.922544 CAGCATTGAAAGTAAAGGGTGAAAG 59.077 40.000 0.00 0.00 38.66 2.62
3289 4003 5.303165 TGATTGCCTCATATGACTGTGATC 58.697 41.667 0.00 3.41 0.00 2.92
3294 4008 5.993441 TGTGTATGATTGCCTCATATGACTG 59.007 40.000 0.00 0.00 46.07 3.51
3360 4074 4.207891 TCCTCCTGAAAATTTCTCTCCG 57.792 45.455 7.29 0.00 0.00 4.63
3363 4077 7.178097 CCTTCAAATCCTCCTGAAAATTTCTCT 59.822 37.037 7.29 0.00 31.41 3.10
3583 4301 4.868171 AGTGATGCATTTGTGATTTCATGC 59.132 37.500 0.00 0.00 35.77 4.06
3685 4406 4.097892 CAGGCCTACAACTTTTCAGTTTGT 59.902 41.667 3.98 0.00 40.66 2.83
3708 4429 4.953269 TCGATCGTTCACAGTTTAATTGC 58.047 39.130 15.94 0.00 0.00 3.56
3782 4503 5.261216 AGGGTACATGTTCCATTAACTTGG 58.739 41.667 21.51 0.00 43.90 3.61
3811 4535 2.557056 GCTTAACACTTTGGGAGGGAAC 59.443 50.000 0.00 0.00 31.33 3.62
3812 4536 2.175931 TGCTTAACACTTTGGGAGGGAA 59.824 45.455 0.00 0.00 31.33 3.97
3816 4540 2.887152 AGCTTGCTTAACACTTTGGGAG 59.113 45.455 0.00 0.00 0.00 4.30
3817 4541 2.944129 AGCTTGCTTAACACTTTGGGA 58.056 42.857 0.00 0.00 0.00 4.37
3818 4542 3.733443 AAGCTTGCTTAACACTTTGGG 57.267 42.857 6.02 0.00 0.00 4.12
3819 4543 4.278419 ACCTAAGCTTGCTTAACACTTTGG 59.722 41.667 9.86 12.60 38.61 3.28
3820 4544 5.215160 CACCTAAGCTTGCTTAACACTTTG 58.785 41.667 9.86 3.37 0.00 2.77
3868 4592 8.197592 TCCACTAACAAGGAGTATTTGTTCTA 57.802 34.615 6.63 0.00 43.26 2.10
3909 4633 6.889301 ATTATAGATTGTTGAGCACATGGG 57.111 37.500 0.00 0.00 34.43 4.00
3944 4672 8.733458 CAACAAGAATCAATCTGATTTACCTGA 58.267 33.333 0.00 0.00 46.20 3.86
3949 4677 8.192774 GGATGCAACAAGAATCAATCTGATTTA 58.807 33.333 0.00 0.00 46.20 1.40
4006 4734 4.569943 ACAGGTCTATGTGCTACTTTGTG 58.430 43.478 0.00 0.00 30.46 3.33
4088 4878 2.972625 TGCACGGAACTAATTGAGGAG 58.027 47.619 0.00 0.00 0.00 3.69
4215 5009 4.739716 CGTGAGTTCTGTTCCCAAAATTTG 59.260 41.667 0.00 0.00 0.00 2.32
4220 5014 1.487142 TCCGTGAGTTCTGTTCCCAAA 59.513 47.619 0.00 0.00 0.00 3.28
4221 5015 1.124780 TCCGTGAGTTCTGTTCCCAA 58.875 50.000 0.00 0.00 0.00 4.12
4223 5017 2.474410 ATTCCGTGAGTTCTGTTCCC 57.526 50.000 0.00 0.00 0.00 3.97
4239 5033 1.343821 CACGCGCTGTCGGTAATTC 59.656 57.895 5.73 0.00 35.95 2.17
4249 5043 0.383491 CAGACAGAAAACACGCGCTG 60.383 55.000 5.73 6.84 34.65 5.18
4252 5046 0.111704 CGACAGACAGAAAACACGCG 60.112 55.000 3.53 3.53 0.00 6.01
4253 5047 1.205657 TCGACAGACAGAAAACACGC 58.794 50.000 0.00 0.00 0.00 5.34
4254 5048 2.858344 ACTTCGACAGACAGAAAACACG 59.142 45.455 0.00 0.00 0.00 4.49
4255 5049 3.617263 ACACTTCGACAGACAGAAAACAC 59.383 43.478 0.00 0.00 0.00 3.32
4257 5051 4.439354 GACACTTCGACAGACAGAAAAC 57.561 45.455 0.00 0.00 0.00 2.43
4271 5065 3.553511 CCAACTCATAGCATCGACACTTC 59.446 47.826 0.00 0.00 0.00 3.01
4272 5066 3.055819 ACCAACTCATAGCATCGACACTT 60.056 43.478 0.00 0.00 0.00 3.16
4273 5067 2.497675 ACCAACTCATAGCATCGACACT 59.502 45.455 0.00 0.00 0.00 3.55
4274 5068 2.893637 ACCAACTCATAGCATCGACAC 58.106 47.619 0.00 0.00 0.00 3.67
4277 5071 2.236146 ACCAACCAACTCATAGCATCGA 59.764 45.455 0.00 0.00 0.00 3.59
4278 5072 2.632377 ACCAACCAACTCATAGCATCG 58.368 47.619 0.00 0.00 0.00 3.84
4279 5073 3.428045 GCAACCAACCAACTCATAGCATC 60.428 47.826 0.00 0.00 0.00 3.91
4280 5074 2.493278 GCAACCAACCAACTCATAGCAT 59.507 45.455 0.00 0.00 0.00 3.79
4281 5075 1.885887 GCAACCAACCAACTCATAGCA 59.114 47.619 0.00 0.00 0.00 3.49
4282 5076 1.885887 TGCAACCAACCAACTCATAGC 59.114 47.619 0.00 0.00 0.00 2.97
4283 5077 3.674138 GCATGCAACCAACCAACTCATAG 60.674 47.826 14.21 0.00 0.00 2.23
4514 5308 0.879090 TGCGTGTCAGTCGATGTAGT 59.121 50.000 0.00 0.00 0.00 2.73
4601 5422 0.319211 CGTACTCCTTGGCGAACACA 60.319 55.000 0.00 0.00 0.00 3.72
4694 5515 4.437239 ACTACGCATTCAGAAATCAGGAG 58.563 43.478 0.00 0.00 0.00 3.69
4695 5516 4.471904 ACTACGCATTCAGAAATCAGGA 57.528 40.909 0.00 0.00 0.00 3.86
4697 5518 5.302855 CGTACTACGCATTCAGAAATCAG 57.697 43.478 0.00 0.00 33.65 2.90
4721 5542 1.856014 GCACGCACAGTTTCAGACAAC 60.856 52.381 0.00 0.00 0.00 3.32
4738 5559 0.599558 TGCAAGATTCAGCAAGGCAC 59.400 50.000 1.86 0.00 37.90 5.01
4739 5560 0.885879 CTGCAAGATTCAGCAAGGCA 59.114 50.000 5.51 0.00 40.73 4.75
4740 5561 0.172803 CCTGCAAGATTCAGCAAGGC 59.827 55.000 5.51 0.00 40.73 4.35
4741 5562 0.815734 CCCTGCAAGATTCAGCAAGG 59.184 55.000 4.89 4.89 40.73 3.61
4742 5563 1.542492 ACCCTGCAAGATTCAGCAAG 58.458 50.000 5.51 0.42 40.73 4.01
4743 5564 1.999648 AACCCTGCAAGATTCAGCAA 58.000 45.000 5.51 0.00 40.73 3.91
4744 5565 2.877097 TAACCCTGCAAGATTCAGCA 57.123 45.000 4.15 4.15 39.25 4.41
4745 5566 5.334414 CGAATATAACCCTGCAAGATTCAGC 60.334 44.000 4.19 0.00 34.07 4.26
4746 5567 5.180117 CCGAATATAACCCTGCAAGATTCAG 59.820 44.000 4.19 0.00 34.07 3.02
4907 5728 8.758715 CAAGTTACAACTTACAACCTAGTACAC 58.241 37.037 7.02 0.00 46.89 2.90
4914 5735 5.681639 AGAGCAAGTTACAACTTACAACCT 58.318 37.500 7.02 0.00 46.89 3.50
4918 5742 5.236478 GCAGAAGAGCAAGTTACAACTTACA 59.764 40.000 7.02 0.00 46.89 2.41
4932 5756 5.648960 TGTGATCATTATTTGCAGAAGAGCA 59.351 36.000 0.00 0.00 43.99 4.26
4946 5770 6.212589 TCAGAGGGTGTTAGTTGTGATCATTA 59.787 38.462 0.00 0.00 0.00 1.90
4973 5800 1.227380 GAGGGACCTATGTGCGCAG 60.227 63.158 12.22 0.00 32.82 5.18
4986 5813 5.104693 TGAAGCTCCATTTATTAACGAGGGA 60.105 40.000 0.00 0.00 0.00 4.20
5054 5881 0.107410 TCACGCACCCACAAGTTCTT 60.107 50.000 0.00 0.00 0.00 2.52
5173 6005 1.560923 CGGTTCACTAGCTTCATCCG 58.439 55.000 0.00 0.00 0.00 4.18
5217 6049 2.884639 TGAAGATCGGATATCGCTCACA 59.115 45.455 0.00 0.00 36.57 3.58
5236 6068 2.799126 AAATGTAGGCCGTTGGATGA 57.201 45.000 0.00 0.00 0.00 2.92
5346 6180 5.221661 CCGGCAGGACTCTTAGGTTTTATAT 60.222 44.000 0.00 0.00 41.02 0.86
5358 6192 2.043450 CCTCTCCGGCAGGACTCT 60.043 66.667 12.89 0.00 42.75 3.24
5393 6227 1.207329 CCTCGGCTAGGCTTTACAACT 59.793 52.381 15.11 0.00 38.97 3.16
5402 6236 3.228017 GTCTCCCCTCGGCTAGGC 61.228 72.222 6.15 6.15 45.03 3.93
5411 6245 2.183679 GATCTCACACAAGTCTCCCCT 58.816 52.381 0.00 0.00 0.00 4.79
5412 6246 2.167487 GAGATCTCACACAAGTCTCCCC 59.833 54.545 18.11 0.00 31.41 4.81
5413 6247 2.828520 TGAGATCTCACACAAGTCTCCC 59.171 50.000 21.67 0.00 35.58 4.30
5432 6266 6.207691 TCTCATGATCTCACGTAAATGTGA 57.792 37.500 0.00 5.00 46.15 3.58
5433 6267 6.698766 TGATCTCATGATCTCACGTAAATGTG 59.301 38.462 0.00 0.00 46.84 3.21
5434 6268 6.809869 TGATCTCATGATCTCACGTAAATGT 58.190 36.000 0.00 0.00 46.84 2.71
5435 6269 7.307042 GGTTGATCTCATGATCTCACGTAAATG 60.307 40.741 0.00 0.00 46.84 2.32
5436 6270 6.703607 GGTTGATCTCATGATCTCACGTAAAT 59.296 38.462 0.00 0.00 46.84 1.40
5437 6271 6.042777 GGTTGATCTCATGATCTCACGTAAA 58.957 40.000 0.00 0.00 46.84 2.01
5438 6272 5.360999 AGGTTGATCTCATGATCTCACGTAA 59.639 40.000 0.00 0.00 46.84 3.18
5439 6273 4.889995 AGGTTGATCTCATGATCTCACGTA 59.110 41.667 0.00 0.00 46.84 3.57
5440 6274 3.703556 AGGTTGATCTCATGATCTCACGT 59.296 43.478 0.00 0.00 46.84 4.49
5441 6275 4.202090 TGAGGTTGATCTCATGATCTCACG 60.202 45.833 0.00 0.00 46.84 4.35
5442 6276 5.273674 TGAGGTTGATCTCATGATCTCAC 57.726 43.478 0.00 4.66 46.84 3.51
5443 6277 5.945144 TTGAGGTTGATCTCATGATCTCA 57.055 39.130 0.00 0.00 46.84 3.27
5444 6278 7.804843 ATTTTGAGGTTGATCTCATGATCTC 57.195 36.000 0.00 0.00 46.84 2.75
5445 6279 8.591114 AAATTTTGAGGTTGATCTCATGATCT 57.409 30.769 0.00 0.00 46.84 2.75
5446 6280 8.464404 TGAAATTTTGAGGTTGATCTCATGATC 58.536 33.333 0.00 0.00 46.89 2.92
5447 6281 8.357290 TGAAATTTTGAGGTTGATCTCATGAT 57.643 30.769 0.00 0.00 42.57 2.45
5448 6282 7.764141 TGAAATTTTGAGGTTGATCTCATGA 57.236 32.000 0.00 0.00 42.57 3.07
5492 6326 9.927668 AGATGTTGTCAAATAATTTCGGATTTT 57.072 25.926 0.00 0.00 0.00 1.82
5496 6330 9.173021 ACATAGATGTTGTCAAATAATTTCGGA 57.827 29.630 0.00 0.00 37.90 4.55
5501 6335 9.920946 ACCCTACATAGATGTTGTCAAATAATT 57.079 29.630 0.00 0.00 41.97 1.40
5504 6338 9.996554 CATACCCTACATAGATGTTGTCAAATA 57.003 33.333 0.00 0.00 41.97 1.40
5505 6339 8.494433 ACATACCCTACATAGATGTTGTCAAAT 58.506 33.333 0.00 0.00 41.97 2.32
5506 6340 7.857456 ACATACCCTACATAGATGTTGTCAAA 58.143 34.615 0.00 0.00 41.97 2.69
5507 6341 7.344612 AGACATACCCTACATAGATGTTGTCAA 59.655 37.037 18.25 0.00 41.97 3.18
5508 6342 6.839134 AGACATACCCTACATAGATGTTGTCA 59.161 38.462 18.25 0.00 41.97 3.58
5509 6343 7.291411 AGACATACCCTACATAGATGTTGTC 57.709 40.000 12.07 12.07 41.97 3.18
5510 6344 7.783119 TGTAGACATACCCTACATAGATGTTGT 59.217 37.037 0.00 0.00 40.87 3.32
5511 6345 8.178313 TGTAGACATACCCTACATAGATGTTG 57.822 38.462 0.00 0.00 40.87 3.33
5512 6346 8.639761 GTTGTAGACATACCCTACATAGATGTT 58.360 37.037 0.00 0.00 43.94 2.71
5513 6347 8.005388 AGTTGTAGACATACCCTACATAGATGT 58.995 37.037 0.00 0.08 43.94 3.06
5514 6348 8.410673 AGTTGTAGACATACCCTACATAGATG 57.589 38.462 0.00 0.00 43.94 2.90
5515 6349 7.670559 GGAGTTGTAGACATACCCTACATAGAT 59.329 40.741 0.00 0.00 43.94 1.98
5516 6350 7.002879 GGAGTTGTAGACATACCCTACATAGA 58.997 42.308 0.00 0.00 43.94 1.98
5517 6351 6.072618 CGGAGTTGTAGACATACCCTACATAG 60.073 46.154 0.00 0.00 43.94 2.23
5518 6352 5.766670 CGGAGTTGTAGACATACCCTACATA 59.233 44.000 0.00 0.00 43.94 2.29
5519 6353 4.583489 CGGAGTTGTAGACATACCCTACAT 59.417 45.833 0.00 0.00 43.94 2.29
5520 6354 3.949754 CGGAGTTGTAGACATACCCTACA 59.050 47.826 0.00 0.00 43.15 2.74
5521 6355 4.202441 TCGGAGTTGTAGACATACCCTAC 58.798 47.826 0.00 0.00 37.57 3.18
5522 6356 4.164796 TCTCGGAGTTGTAGACATACCCTA 59.835 45.833 4.69 0.00 0.00 3.53
5523 6357 3.053842 TCTCGGAGTTGTAGACATACCCT 60.054 47.826 4.69 0.00 0.00 4.34
5524 6358 3.285484 TCTCGGAGTTGTAGACATACCC 58.715 50.000 4.69 0.00 0.00 3.69
5525 6359 4.978083 TTCTCGGAGTTGTAGACATACC 57.022 45.455 4.69 0.00 0.00 2.73
5526 6360 7.544566 TGAATTTTCTCGGAGTTGTAGACATAC 59.455 37.037 4.69 0.00 0.00 2.39
5527 6361 7.608153 TGAATTTTCTCGGAGTTGTAGACATA 58.392 34.615 4.69 0.00 0.00 2.29
5528 6362 6.464222 TGAATTTTCTCGGAGTTGTAGACAT 58.536 36.000 4.69 0.00 0.00 3.06
5529 6363 5.849510 TGAATTTTCTCGGAGTTGTAGACA 58.150 37.500 4.69 0.00 0.00 3.41
5530 6364 5.163943 GCTGAATTTTCTCGGAGTTGTAGAC 60.164 44.000 4.69 0.00 0.00 2.59
5531 6365 4.929808 GCTGAATTTTCTCGGAGTTGTAGA 59.070 41.667 4.69 0.00 0.00 2.59
5532 6366 4.932200 AGCTGAATTTTCTCGGAGTTGTAG 59.068 41.667 4.69 0.00 0.00 2.74
5533 6367 4.894784 AGCTGAATTTTCTCGGAGTTGTA 58.105 39.130 4.69 0.00 0.00 2.41
5534 6368 3.744660 AGCTGAATTTTCTCGGAGTTGT 58.255 40.909 4.69 0.00 0.00 3.32
5535 6369 3.748048 TGAGCTGAATTTTCTCGGAGTTG 59.252 43.478 4.69 0.00 0.00 3.16
5536 6370 4.008074 TGAGCTGAATTTTCTCGGAGTT 57.992 40.909 4.69 0.00 0.00 3.01
5537 6371 3.685139 TGAGCTGAATTTTCTCGGAGT 57.315 42.857 4.69 0.00 0.00 3.85
5538 6372 5.049129 AGTTTTGAGCTGAATTTTCTCGGAG 60.049 40.000 0.00 0.00 0.00 4.63
5539 6373 4.821805 AGTTTTGAGCTGAATTTTCTCGGA 59.178 37.500 0.00 0.00 0.00 4.55
5540 6374 5.113502 AGTTTTGAGCTGAATTTTCTCGG 57.886 39.130 0.00 0.00 0.00 4.63
5541 6375 5.751680 TGAGTTTTGAGCTGAATTTTCTCG 58.248 37.500 0.00 0.00 0.00 4.04
5542 6376 7.650903 ACATTGAGTTTTGAGCTGAATTTTCTC 59.349 33.333 0.00 0.00 0.00 2.87
5543 6377 7.495055 ACATTGAGTTTTGAGCTGAATTTTCT 58.505 30.769 0.00 0.00 0.00 2.52
5544 6378 7.704789 ACATTGAGTTTTGAGCTGAATTTTC 57.295 32.000 0.00 0.00 0.00 2.29
5545 6379 8.196771 TGTACATTGAGTTTTGAGCTGAATTTT 58.803 29.630 0.00 0.00 0.00 1.82
5546 6380 7.715657 TGTACATTGAGTTTTGAGCTGAATTT 58.284 30.769 0.00 0.00 0.00 1.82
5547 6381 7.275888 TGTACATTGAGTTTTGAGCTGAATT 57.724 32.000 0.00 0.00 0.00 2.17
5548 6382 6.882610 TGTACATTGAGTTTTGAGCTGAAT 57.117 33.333 0.00 0.00 0.00 2.57
5549 6383 6.882610 ATGTACATTGAGTTTTGAGCTGAA 57.117 33.333 1.41 0.00 0.00 3.02
5550 6384 6.882610 AATGTACATTGAGTTTTGAGCTGA 57.117 33.333 20.19 0.00 0.00 4.26
5551 6385 6.364165 CCAAATGTACATTGAGTTTTGAGCTG 59.636 38.462 21.46 10.88 30.55 4.24
5552 6386 6.449698 CCAAATGTACATTGAGTTTTGAGCT 58.550 36.000 21.46 0.00 30.55 4.09
5553 6387 5.634859 CCCAAATGTACATTGAGTTTTGAGC 59.365 40.000 21.46 0.00 30.55 4.26
5554 6388 6.015519 TCCCCAAATGTACATTGAGTTTTGAG 60.016 38.462 21.46 6.85 30.55 3.02
5555 6389 5.835819 TCCCCAAATGTACATTGAGTTTTGA 59.164 36.000 21.46 9.40 30.55 2.69
5556 6390 6.095432 TCCCCAAATGTACATTGAGTTTTG 57.905 37.500 21.46 14.65 0.00 2.44
5557 6391 6.933514 ATCCCCAAATGTACATTGAGTTTT 57.066 33.333 21.46 2.96 0.00 2.43
5558 6392 6.070824 GGAATCCCCAAATGTACATTGAGTTT 60.071 38.462 21.46 10.69 34.14 2.66
5559 6393 5.422012 GGAATCCCCAAATGTACATTGAGTT 59.578 40.000 21.46 10.70 34.14 3.01
5560 6394 4.956075 GGAATCCCCAAATGTACATTGAGT 59.044 41.667 21.46 13.13 34.14 3.41
5561 6395 4.955450 TGGAATCCCCAAATGTACATTGAG 59.045 41.667 21.46 16.13 43.29 3.02
5562 6396 4.940483 TGGAATCCCCAAATGTACATTGA 58.060 39.130 21.46 14.20 43.29 2.57
5574 6408 6.665680 TCGAATTTATCTTTTTGGAATCCCCA 59.334 34.615 0.00 0.00 44.93 4.96
5575 6409 7.107639 TCGAATTTATCTTTTTGGAATCCCC 57.892 36.000 0.00 0.00 0.00 4.81
5576 6410 9.034544 CATTCGAATTTATCTTTTTGGAATCCC 57.965 33.333 8.21 0.00 29.08 3.85
5577 6411 9.586435 ACATTCGAATTTATCTTTTTGGAATCC 57.414 29.630 8.21 0.00 29.08 3.01
5580 6414 9.973450 TTCACATTCGAATTTATCTTTTTGGAA 57.027 25.926 8.21 0.00 0.00 3.53
5588 6422 9.599866 TGTCACTATTCACATTCGAATTTATCT 57.400 29.630 8.21 0.00 36.92 1.98
5590 6424 9.988350 GTTGTCACTATTCACATTCGAATTTAT 57.012 29.630 8.21 2.49 36.92 1.40
5591 6425 9.214957 AGTTGTCACTATTCACATTCGAATTTA 57.785 29.630 8.21 0.00 36.92 1.40
5592 6426 8.099364 AGTTGTCACTATTCACATTCGAATTT 57.901 30.769 8.21 0.00 36.92 1.82
5593 6427 7.672983 AGTTGTCACTATTCACATTCGAATT 57.327 32.000 8.21 0.00 36.92 2.17
5594 6428 7.672983 AAGTTGTCACTATTCACATTCGAAT 57.327 32.000 4.39 4.39 39.03 3.34
5595 6429 7.490962 AAAGTTGTCACTATTCACATTCGAA 57.509 32.000 0.00 0.00 30.68 3.71
5596 6430 7.351981 CAAAAGTTGTCACTATTCACATTCGA 58.648 34.615 0.00 0.00 30.68 3.71
5597 6431 6.578545 CCAAAAGTTGTCACTATTCACATTCG 59.421 38.462 0.00 0.00 30.68 3.34
5598 6432 7.379529 CACCAAAAGTTGTCACTATTCACATTC 59.620 37.037 0.00 0.00 30.68 2.67
5599 6433 7.068103 TCACCAAAAGTTGTCACTATTCACATT 59.932 33.333 0.00 0.00 30.68 2.71
5600 6434 6.545666 TCACCAAAAGTTGTCACTATTCACAT 59.454 34.615 0.00 0.00 30.68 3.21
5601 6435 5.883115 TCACCAAAAGTTGTCACTATTCACA 59.117 36.000 0.00 0.00 30.68 3.58
5602 6436 6.371809 TCACCAAAAGTTGTCACTATTCAC 57.628 37.500 0.00 0.00 30.68 3.18
5603 6437 7.581213 ATTCACCAAAAGTTGTCACTATTCA 57.419 32.000 0.00 0.00 30.68 2.57
5604 6438 8.784043 ACTATTCACCAAAAGTTGTCACTATTC 58.216 33.333 0.00 0.00 30.68 1.75
5605 6439 8.691661 ACTATTCACCAAAAGTTGTCACTATT 57.308 30.769 0.00 0.00 30.68 1.73
5606 6440 9.216117 GTACTATTCACCAAAAGTTGTCACTAT 57.784 33.333 0.00 0.00 30.68 2.12
5607 6441 8.426489 AGTACTATTCACCAAAAGTTGTCACTA 58.574 33.333 0.00 0.00 30.68 2.74
5608 6442 7.280356 AGTACTATTCACCAAAAGTTGTCACT 58.720 34.615 0.00 0.00 33.11 3.41
5609 6443 7.492352 AGTACTATTCACCAAAAGTTGTCAC 57.508 36.000 0.00 0.00 0.00 3.67
5610 6444 8.514330 AAAGTACTATTCACCAAAAGTTGTCA 57.486 30.769 0.00 0.00 0.00 3.58
5669 6503 9.793252 CCCAATTCAACTCACATTAATAGAAAG 57.207 33.333 0.00 0.00 0.00 2.62
5670 6504 9.527157 TCCCAATTCAACTCACATTAATAGAAA 57.473 29.630 0.00 0.00 0.00 2.52
5671 6505 9.177608 CTCCCAATTCAACTCACATTAATAGAA 57.822 33.333 0.00 0.00 0.00 2.10
5672 6506 8.328758 ACTCCCAATTCAACTCACATTAATAGA 58.671 33.333 0.00 0.00 0.00 1.98
5673 6507 8.511604 ACTCCCAATTCAACTCACATTAATAG 57.488 34.615 0.00 0.00 0.00 1.73
5674 6508 8.739039 CAACTCCCAATTCAACTCACATTAATA 58.261 33.333 0.00 0.00 0.00 0.98
5675 6509 7.451255 TCAACTCCCAATTCAACTCACATTAAT 59.549 33.333 0.00 0.00 0.00 1.40
5676 6510 6.775142 TCAACTCCCAATTCAACTCACATTAA 59.225 34.615 0.00 0.00 0.00 1.40
5677 6511 6.303054 TCAACTCCCAATTCAACTCACATTA 58.697 36.000 0.00 0.00 0.00 1.90
5678 6512 5.139727 TCAACTCCCAATTCAACTCACATT 58.860 37.500 0.00 0.00 0.00 2.71
5679 6513 4.728772 TCAACTCCCAATTCAACTCACAT 58.271 39.130 0.00 0.00 0.00 3.21
5680 6514 4.163441 TCAACTCCCAATTCAACTCACA 57.837 40.909 0.00 0.00 0.00 3.58
5681 6515 5.067805 AGTTTCAACTCCCAATTCAACTCAC 59.932 40.000 0.00 0.00 32.86 3.51
5682 6516 5.200483 AGTTTCAACTCCCAATTCAACTCA 58.800 37.500 0.00 0.00 32.86 3.41
5683 6517 5.774498 AGTTTCAACTCCCAATTCAACTC 57.226 39.130 0.00 0.00 32.86 3.01
5684 6518 6.544928 AAAGTTTCAACTCCCAATTCAACT 57.455 33.333 0.00 0.00 38.57 3.16
5685 6519 6.019881 CGAAAAGTTTCAACTCCCAATTCAAC 60.020 38.462 4.76 0.00 38.57 3.18
5686 6520 6.039616 CGAAAAGTTTCAACTCCCAATTCAA 58.960 36.000 4.76 0.00 38.57 2.69
5687 6521 5.451242 CCGAAAAGTTTCAACTCCCAATTCA 60.451 40.000 4.76 0.00 38.57 2.57
5688 6522 4.982295 CCGAAAAGTTTCAACTCCCAATTC 59.018 41.667 4.76 0.00 38.57 2.17
5689 6523 4.202212 CCCGAAAAGTTTCAACTCCCAATT 60.202 41.667 4.76 0.00 38.57 2.32
5690 6524 3.320826 CCCGAAAAGTTTCAACTCCCAAT 59.679 43.478 4.76 0.00 38.57 3.16
5691 6525 2.691011 CCCGAAAAGTTTCAACTCCCAA 59.309 45.455 4.76 0.00 38.57 4.12
5692 6526 2.303175 CCCGAAAAGTTTCAACTCCCA 58.697 47.619 4.76 0.00 38.57 4.37
5693 6527 1.611977 CCCCGAAAAGTTTCAACTCCC 59.388 52.381 4.76 0.00 38.57 4.30
5694 6528 1.611977 CCCCCGAAAAGTTTCAACTCC 59.388 52.381 4.76 0.00 38.57 3.85
5695 6529 1.000607 GCCCCCGAAAAGTTTCAACTC 60.001 52.381 4.76 0.00 38.57 3.01
5696 6530 1.037493 GCCCCCGAAAAGTTTCAACT 58.963 50.000 4.76 0.00 42.04 3.16
5697 6531 0.747852 TGCCCCCGAAAAGTTTCAAC 59.252 50.000 4.76 0.00 37.01 3.18
5698 6532 1.710816 ATGCCCCCGAAAAGTTTCAA 58.289 45.000 4.76 0.00 37.01 2.69
5699 6533 2.164338 GTATGCCCCCGAAAAGTTTCA 58.836 47.619 4.76 0.00 37.01 2.69
5700 6534 2.164338 TGTATGCCCCCGAAAAGTTTC 58.836 47.619 0.00 0.00 0.00 2.78
5701 6535 2.296073 TGTATGCCCCCGAAAAGTTT 57.704 45.000 0.00 0.00 0.00 2.66
5702 6536 2.291282 TGATGTATGCCCCCGAAAAGTT 60.291 45.455 0.00 0.00 0.00 2.66
5703 6537 1.283613 TGATGTATGCCCCCGAAAAGT 59.716 47.619 0.00 0.00 0.00 2.66
5704 6538 2.051334 TGATGTATGCCCCCGAAAAG 57.949 50.000 0.00 0.00 0.00 2.27
5705 6539 2.494073 GTTTGATGTATGCCCCCGAAAA 59.506 45.455 0.00 0.00 0.00 2.29
5706 6540 2.096248 GTTTGATGTATGCCCCCGAAA 58.904 47.619 0.00 0.00 0.00 3.46
5707 6541 1.004862 TGTTTGATGTATGCCCCCGAA 59.995 47.619 0.00 0.00 0.00 4.30
5708 6542 0.621082 TGTTTGATGTATGCCCCCGA 59.379 50.000 0.00 0.00 0.00 5.14
5709 6543 1.691196 ATGTTTGATGTATGCCCCCG 58.309 50.000 0.00 0.00 0.00 5.73
5710 6544 3.030291 TCAATGTTTGATGTATGCCCCC 58.970 45.455 0.00 0.00 34.08 5.40
5801 6635 8.326310 CTTGTGTAAGATCCCACATTAGGTGAG 61.326 44.444 10.25 0.00 42.16 3.51
5802 6636 6.576244 CTTGTGTAAGATCCCACATTAGGTGA 60.576 42.308 10.25 0.00 42.16 4.02
5803 6637 5.586243 CTTGTGTAAGATCCCACATTAGGTG 59.414 44.000 10.25 0.00 40.94 4.00
5804 6638 5.339200 CCTTGTGTAAGATCCCACATTAGGT 60.339 44.000 14.57 0.00 40.94 3.08
5805 6639 5.126067 CCTTGTGTAAGATCCCACATTAGG 58.874 45.833 10.25 10.81 40.94 2.69
5806 6640 4.576463 GCCTTGTGTAAGATCCCACATTAG 59.424 45.833 10.25 6.81 40.94 1.73
5807 6641 4.227300 AGCCTTGTGTAAGATCCCACATTA 59.773 41.667 10.25 0.00 40.94 1.90
5808 6642 3.010584 AGCCTTGTGTAAGATCCCACATT 59.989 43.478 10.25 0.00 40.94 2.71
5809 6643 2.578021 AGCCTTGTGTAAGATCCCACAT 59.422 45.455 10.25 0.00 40.94 3.21
5810 6644 1.985159 AGCCTTGTGTAAGATCCCACA 59.015 47.619 6.41 6.41 39.68 4.17
5811 6645 2.633488 GAGCCTTGTGTAAGATCCCAC 58.367 52.381 0.00 0.00 35.92 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.