Multiple sequence alignment - TraesCS5A01G280800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G280800 chr5A 100.000 3731 0 0 1 3731 489932114 489935844 0.000000e+00 6890.0
1 TraesCS5A01G280800 chr5A 77.869 732 129 24 2018 2734 489843843 489844556 1.240000e-114 424.0
2 TraesCS5A01G280800 chr5A 87.437 199 13 11 888 1079 302989259 302989066 6.270000e-53 219.0
3 TraesCS5A01G280800 chr5A 85.799 169 13 5 989 1153 489921438 489921599 6.410000e-38 169.0
4 TraesCS5A01G280800 chr5B 91.214 1343 70 22 1798 3099 465824709 465826044 0.000000e+00 1783.0
5 TraesCS5A01G280800 chr5B 85.152 1017 66 41 718 1704 465823721 465824682 0.000000e+00 963.0
6 TraesCS5A01G280800 chr5B 89.567 623 54 6 3109 3731 465826124 465826735 0.000000e+00 780.0
7 TraesCS5A01G280800 chr5B 78.371 712 129 17 2018 2718 465255354 465256051 4.420000e-119 438.0
8 TraesCS5A01G280800 chr5D 95.385 1105 40 9 1798 2897 387250977 387252075 0.000000e+00 1748.0
9 TraesCS5A01G280800 chr5D 84.265 966 73 40 772 1704 387250031 387250950 0.000000e+00 869.0
10 TraesCS5A01G280800 chr5D 78.386 731 127 24 2018 2734 387098450 387099163 2.640000e-121 446.0
11 TraesCS5A01G280800 chr5D 85.549 346 33 9 3392 3730 387292119 387292454 2.760000e-91 346.0
12 TraesCS5A01G280800 chr6A 93.137 918 55 6 1896 2808 36859263 36858349 0.000000e+00 1339.0
13 TraesCS5A01G280800 chr6A 90.000 120 8 3 1 117 103390143 103390261 6.450000e-33 152.0
14 TraesCS5A01G280800 chr6D 89.138 580 46 10 934 1510 162246620 162246055 0.000000e+00 706.0
15 TraesCS5A01G280800 chr2B 85.669 628 67 16 888 1510 391877668 391877059 1.130000e-179 640.0
16 TraesCS5A01G280800 chr2B 78.392 199 41 2 2198 2395 412186040 412186237 1.090000e-25 128.0
17 TraesCS5A01G280800 chr2B 79.167 144 19 4 1594 1736 391877063 391876930 5.130000e-14 89.8
18 TraesCS5A01G280800 chr6B 85.816 564 53 10 888 1439 389763603 389764151 1.160000e-159 573.0
19 TraesCS5A01G280800 chr6B 83.607 244 21 10 1594 1835 389771330 389771556 1.050000e-50 211.0
20 TraesCS5A01G280800 chr6B 79.911 224 33 9 3157 3377 13204882 13204668 1.790000e-33 154.0
21 TraesCS5A01G280800 chr6B 79.911 224 33 9 3157 3377 13224010 13223796 1.790000e-33 154.0
22 TraesCS5A01G280800 chr6B 77.778 225 37 10 3157 3374 13246405 13246187 3.910000e-25 126.0
23 TraesCS5A01G280800 chr2A 92.929 198 13 1 1184 1381 239955012 239955208 1.700000e-73 287.0
24 TraesCS5A01G280800 chr2A 96.970 99 3 0 1 99 445281780 445281878 2.300000e-37 167.0
25 TraesCS5A01G280800 chr2A 90.756 119 9 1 1 117 135229694 135229576 1.390000e-34 158.0
26 TraesCS5A01G280800 chr2A 89.256 121 13 0 1 121 216862985 216863105 6.450000e-33 152.0
27 TraesCS5A01G280800 chr2A 80.000 160 30 2 2237 2395 459929968 459930126 2.350000e-22 117.0
28 TraesCS5A01G280800 chr4A 89.447 199 9 12 888 1079 142903567 142903374 1.340000e-59 241.0
29 TraesCS5A01G280800 chr4A 93.578 109 7 0 1 109 5698040 5698148 2.980000e-36 163.0
30 TraesCS5A01G280800 chr4A 92.727 110 8 0 1 110 206667388 206667279 3.860000e-35 159.0
31 TraesCS5A01G280800 chr7A 89.062 192 11 9 888 1073 503326448 503326635 2.900000e-56 230.0
32 TraesCS5A01G280800 chr7A 94.444 108 4 2 1 107 213063959 213063853 8.290000e-37 165.0
33 TraesCS5A01G280800 chr1D 77.596 366 56 20 3010 3366 261156209 261155861 8.170000e-47 198.0
34 TraesCS5A01G280800 chr1A 76.966 356 64 12 3007 3355 339141249 339141593 1.770000e-43 187.0
35 TraesCS5A01G280800 chr3A 92.241 116 6 3 1 116 80040649 80040537 1.070000e-35 161.0
36 TraesCS5A01G280800 chr7B 90.000 120 9 3 1 119 15140552 15140435 6.450000e-33 152.0
37 TraesCS5A01G280800 chr7B 77.465 213 38 6 3123 3330 393644352 393644559 6.550000e-23 119.0
38 TraesCS5A01G280800 chr7D 79.147 211 36 4 3123 3330 393963119 393963324 5.020000e-29 139.0
39 TraesCS5A01G280800 chrUn 78.095 210 32 10 3154 3355 79983327 79983124 1.820000e-23 121.0
40 TraesCS5A01G280800 chr2D 80.000 160 30 2 2237 2395 346162391 346162549 2.350000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G280800 chr5A 489932114 489935844 3730 False 6890.000000 6890 100.000000 1 3731 1 chr5A.!!$F3 3730
1 TraesCS5A01G280800 chr5A 489843843 489844556 713 False 424.000000 424 77.869000 2018 2734 1 chr5A.!!$F1 716
2 TraesCS5A01G280800 chr5B 465823721 465826735 3014 False 1175.333333 1783 88.644333 718 3731 3 chr5B.!!$F2 3013
3 TraesCS5A01G280800 chr5B 465255354 465256051 697 False 438.000000 438 78.371000 2018 2718 1 chr5B.!!$F1 700
4 TraesCS5A01G280800 chr5D 387250031 387252075 2044 False 1308.500000 1748 89.825000 772 2897 2 chr5D.!!$F3 2125
5 TraesCS5A01G280800 chr5D 387098450 387099163 713 False 446.000000 446 78.386000 2018 2734 1 chr5D.!!$F1 716
6 TraesCS5A01G280800 chr6A 36858349 36859263 914 True 1339.000000 1339 93.137000 1896 2808 1 chr6A.!!$R1 912
7 TraesCS5A01G280800 chr6D 162246055 162246620 565 True 706.000000 706 89.138000 934 1510 1 chr6D.!!$R1 576
8 TraesCS5A01G280800 chr2B 391876930 391877668 738 True 364.900000 640 82.418000 888 1736 2 chr2B.!!$R1 848
9 TraesCS5A01G280800 chr6B 389763603 389764151 548 False 573.000000 573 85.816000 888 1439 1 chr6B.!!$F1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
352 353 0.033781 CGAGGTACGGGTTTGTTCCA 59.966 55.0 0.00 0.0 38.46 3.53 F
556 557 0.038526 ACTCGCTTCGTCCGAAATGT 60.039 50.0 3.52 0.0 33.92 2.71 F
942 951 0.039911 AGCAGTACCCTCGTCCTTCT 59.960 55.0 0.00 0.0 0.00 2.85 F
1355 1408 0.247460 TTCAGACCGAGACATGGCTG 59.753 55.0 5.31 0.0 34.20 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1796 1856 0.099436 GATCGCCCACTGCATGTTTC 59.901 55.0 0.00 0.0 41.33 2.78 R
1797 1857 0.322816 AGATCGCCCACTGCATGTTT 60.323 50.0 0.00 0.0 41.33 2.83 R
1975 2037 0.787183 GAGCGTGTCAGAAGCAGAAC 59.213 55.0 0.00 0.0 0.00 3.01 R
2950 3035 0.111061 TTGTGGCAGCTGTTGGAGAT 59.889 50.0 16.64 0.0 0.00 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.405278 ACATTGGTTCTTAAAAACTGAGGG 57.595 37.500 0.00 0.00 0.00 4.30
25 26 6.133356 ACATTGGTTCTTAAAAACTGAGGGA 58.867 36.000 0.00 0.00 0.00 4.20
26 27 6.609616 ACATTGGTTCTTAAAAACTGAGGGAA 59.390 34.615 0.00 0.00 0.00 3.97
27 28 7.125053 ACATTGGTTCTTAAAAACTGAGGGAAA 59.875 33.333 0.00 0.00 0.00 3.13
28 29 7.669089 TTGGTTCTTAAAAACTGAGGGAAAT 57.331 32.000 0.00 0.00 0.00 2.17
29 30 8.770010 TTGGTTCTTAAAAACTGAGGGAAATA 57.230 30.769 0.00 0.00 0.00 1.40
30 31 8.173542 TGGTTCTTAAAAACTGAGGGAAATAC 57.826 34.615 0.00 0.00 0.00 1.89
31 32 8.002459 TGGTTCTTAAAAACTGAGGGAAATACT 58.998 33.333 0.00 0.00 0.00 2.12
32 33 8.857098 GGTTCTTAAAAACTGAGGGAAATACTT 58.143 33.333 0.00 0.00 0.00 2.24
35 36 9.211485 TCTTAAAAACTGAGGGAAATACTTACG 57.789 33.333 0.00 0.00 0.00 3.18
36 37 5.874895 AAAACTGAGGGAAATACTTACGC 57.125 39.130 0.00 0.00 0.00 4.42
37 38 4.820894 AACTGAGGGAAATACTTACGCT 57.179 40.909 0.00 0.00 0.00 5.07
38 39 5.927281 AACTGAGGGAAATACTTACGCTA 57.073 39.130 0.00 0.00 0.00 4.26
39 40 5.259832 ACTGAGGGAAATACTTACGCTAC 57.740 43.478 0.00 0.00 0.00 3.58
40 41 4.954826 ACTGAGGGAAATACTTACGCTACT 59.045 41.667 0.00 0.00 0.00 2.57
41 42 5.421374 ACTGAGGGAAATACTTACGCTACTT 59.579 40.000 0.00 0.00 0.00 2.24
42 43 6.070938 ACTGAGGGAAATACTTACGCTACTTT 60.071 38.462 0.00 0.00 0.00 2.66
43 44 6.103997 TGAGGGAAATACTTACGCTACTTTG 58.896 40.000 0.00 0.00 0.00 2.77
44 45 6.046290 AGGGAAATACTTACGCTACTTTGT 57.954 37.500 0.00 0.00 0.00 2.83
45 46 6.470278 AGGGAAATACTTACGCTACTTTGTT 58.530 36.000 0.00 0.00 0.00 2.83
46 47 6.370718 AGGGAAATACTTACGCTACTTTGTTG 59.629 38.462 0.00 0.00 0.00 3.33
47 48 6.019762 GGAAATACTTACGCTACTTTGTTGC 58.980 40.000 0.00 0.00 0.00 4.17
48 49 6.347888 GGAAATACTTACGCTACTTTGTTGCA 60.348 38.462 5.20 0.00 34.26 4.08
49 50 6.737254 AATACTTACGCTACTTTGTTGCAT 57.263 33.333 0.00 0.00 34.26 3.96
50 51 4.663636 ACTTACGCTACTTTGTTGCATC 57.336 40.909 0.00 0.00 34.26 3.91
51 52 4.062293 ACTTACGCTACTTTGTTGCATCA 58.938 39.130 0.00 0.00 34.26 3.07
52 53 4.695455 ACTTACGCTACTTTGTTGCATCAT 59.305 37.500 0.00 0.00 34.26 2.45
53 54 3.747099 ACGCTACTTTGTTGCATCATC 57.253 42.857 0.00 0.00 34.26 2.92
54 55 2.420022 ACGCTACTTTGTTGCATCATCC 59.580 45.455 0.00 0.00 34.26 3.51
55 56 2.223340 CGCTACTTTGTTGCATCATCCC 60.223 50.000 0.00 0.00 34.26 3.85
56 57 3.019564 GCTACTTTGTTGCATCATCCCT 58.980 45.455 0.00 0.00 34.70 4.20
57 58 3.445096 GCTACTTTGTTGCATCATCCCTT 59.555 43.478 0.00 0.00 34.70 3.95
58 59 4.439289 GCTACTTTGTTGCATCATCCCTTC 60.439 45.833 0.00 0.00 34.70 3.46
59 60 2.827921 ACTTTGTTGCATCATCCCTTCC 59.172 45.455 0.00 0.00 0.00 3.46
60 61 2.905415 TTGTTGCATCATCCCTTCCT 57.095 45.000 0.00 0.00 0.00 3.36
61 62 2.425143 TGTTGCATCATCCCTTCCTC 57.575 50.000 0.00 0.00 0.00 3.71
62 63 1.064463 TGTTGCATCATCCCTTCCTCC 60.064 52.381 0.00 0.00 0.00 4.30
63 64 1.213926 GTTGCATCATCCCTTCCTCCT 59.786 52.381 0.00 0.00 0.00 3.69
64 65 1.135094 TGCATCATCCCTTCCTCCTC 58.865 55.000 0.00 0.00 0.00 3.71
65 66 0.034616 GCATCATCCCTTCCTCCTCG 59.965 60.000 0.00 0.00 0.00 4.63
66 67 0.683973 CATCATCCCTTCCTCCTCGG 59.316 60.000 0.00 0.00 0.00 4.63
67 68 0.472734 ATCATCCCTTCCTCCTCGGG 60.473 60.000 0.00 0.00 39.41 5.14
69 70 3.197485 TCCCTTCCTCCTCGGGAA 58.803 61.111 0.00 0.00 43.79 3.97
70 71 1.472460 TCCCTTCCTCCTCGGGAAA 59.528 57.895 0.00 0.00 43.79 3.13
71 72 0.178885 TCCCTTCCTCCTCGGGAAAA 60.179 55.000 0.00 0.00 43.79 2.29
72 73 0.696501 CCCTTCCTCCTCGGGAAAAA 59.303 55.000 0.00 0.00 43.74 1.94
73 74 1.613520 CCCTTCCTCCTCGGGAAAAAC 60.614 57.143 0.00 0.00 43.74 2.43
74 75 1.613520 CCTTCCTCCTCGGGAAAAACC 60.614 57.143 0.00 0.00 43.74 3.27
75 76 1.073284 CTTCCTCCTCGGGAAAAACCA 59.927 52.381 0.00 0.00 43.74 3.67
76 77 1.142060 TCCTCCTCGGGAAAAACCAA 58.858 50.000 0.00 0.00 41.20 3.67
77 78 1.202842 TCCTCCTCGGGAAAAACCAAC 60.203 52.381 0.00 0.00 41.20 3.77
78 79 0.872388 CTCCTCGGGAAAAACCAACG 59.128 55.000 0.00 0.00 41.20 4.10
79 80 1.167781 TCCTCGGGAAAAACCAACGC 61.168 55.000 0.00 0.00 41.20 4.84
80 81 1.448922 CCTCGGGAAAAACCAACGCA 61.449 55.000 0.00 0.00 41.20 5.24
81 82 0.040425 CTCGGGAAAAACCAACGCAG 60.040 55.000 0.00 0.00 41.20 5.18
82 83 0.748729 TCGGGAAAAACCAACGCAGT 60.749 50.000 0.00 0.00 41.20 4.40
83 84 0.593773 CGGGAAAAACCAACGCAGTG 60.594 55.000 0.00 0.00 39.43 3.66
84 85 0.874175 GGGAAAAACCAACGCAGTGC 60.874 55.000 4.58 4.58 39.43 4.40
85 86 0.102300 GGAAAAACCAACGCAGTGCT 59.898 50.000 14.33 0.00 45.00 4.40
86 87 1.477105 GAAAAACCAACGCAGTGCTC 58.523 50.000 14.33 0.00 45.00 4.26
87 88 0.814457 AAAAACCAACGCAGTGCTCA 59.186 45.000 14.33 0.00 45.00 4.26
88 89 0.814457 AAAACCAACGCAGTGCTCAA 59.186 45.000 14.33 0.00 45.00 3.02
89 90 0.381801 AAACCAACGCAGTGCTCAAG 59.618 50.000 14.33 0.00 45.00 3.02
90 91 0.463654 AACCAACGCAGTGCTCAAGA 60.464 50.000 14.33 0.00 45.00 3.02
91 92 0.882042 ACCAACGCAGTGCTCAAGAG 60.882 55.000 14.33 0.00 45.00 2.85
92 93 1.572085 CCAACGCAGTGCTCAAGAGG 61.572 60.000 14.33 2.70 45.00 3.69
93 94 0.882042 CAACGCAGTGCTCAAGAGGT 60.882 55.000 14.33 0.00 45.00 3.85
94 95 0.679505 AACGCAGTGCTCAAGAGGTA 59.320 50.000 14.33 0.00 45.00 3.08
95 96 0.244994 ACGCAGTGCTCAAGAGGTAG 59.755 55.000 14.33 0.00 42.51 3.18
96 97 1.080995 CGCAGTGCTCAAGAGGTAGC 61.081 60.000 14.33 0.00 39.25 3.58
97 98 0.036952 GCAGTGCTCAAGAGGTAGCA 60.037 55.000 8.18 0.00 46.11 3.49
101 102 2.928801 TGCTCAAGAGGTAGCAAACA 57.071 45.000 0.00 0.00 45.36 2.83
102 103 2.494059 TGCTCAAGAGGTAGCAAACAC 58.506 47.619 0.00 0.00 45.36 3.32
103 104 2.104792 TGCTCAAGAGGTAGCAAACACT 59.895 45.455 0.00 0.00 45.36 3.55
104 105 3.323691 TGCTCAAGAGGTAGCAAACACTA 59.676 43.478 0.00 0.00 45.36 2.74
105 106 4.202315 TGCTCAAGAGGTAGCAAACACTAA 60.202 41.667 0.00 0.00 45.36 2.24
106 107 4.152580 GCTCAAGAGGTAGCAAACACTAAC 59.847 45.833 0.00 0.00 38.63 2.34
107 108 5.542779 CTCAAGAGGTAGCAAACACTAACT 58.457 41.667 0.00 0.00 42.96 2.24
108 109 5.925509 TCAAGAGGTAGCAAACACTAACTT 58.074 37.500 0.00 0.00 40.32 2.66
109 110 5.989777 TCAAGAGGTAGCAAACACTAACTTC 59.010 40.000 0.00 0.00 40.32 3.01
110 111 5.810080 AGAGGTAGCAAACACTAACTTCT 57.190 39.130 0.00 0.00 40.32 2.85
111 112 6.176014 AGAGGTAGCAAACACTAACTTCTT 57.824 37.500 0.00 0.00 40.32 2.52
112 113 5.992217 AGAGGTAGCAAACACTAACTTCTTG 59.008 40.000 0.00 0.00 40.32 3.02
113 114 5.925509 AGGTAGCAAACACTAACTTCTTGA 58.074 37.500 0.00 0.00 36.80 3.02
114 115 6.534634 AGGTAGCAAACACTAACTTCTTGAT 58.465 36.000 0.00 0.00 36.80 2.57
115 116 7.676947 AGGTAGCAAACACTAACTTCTTGATA 58.323 34.615 0.00 0.00 36.80 2.15
116 117 8.322091 AGGTAGCAAACACTAACTTCTTGATAT 58.678 33.333 0.00 0.00 36.80 1.63
117 118 8.947115 GGTAGCAAACACTAACTTCTTGATATT 58.053 33.333 0.00 0.00 0.00 1.28
169 170 9.874205 AATCATAATTACCACACATTCAAAAGG 57.126 29.630 0.00 0.00 0.00 3.11
170 171 7.835822 TCATAATTACCACACATTCAAAAGGG 58.164 34.615 0.00 0.00 0.00 3.95
171 172 7.453126 TCATAATTACCACACATTCAAAAGGGT 59.547 33.333 0.00 0.00 0.00 4.34
172 173 4.927978 TTACCACACATTCAAAAGGGTG 57.072 40.909 0.00 0.00 37.29 4.61
173 174 1.412343 ACCACACATTCAAAAGGGTGC 59.588 47.619 0.00 0.00 34.69 5.01
174 175 1.411977 CCACACATTCAAAAGGGTGCA 59.588 47.619 0.00 0.00 34.69 4.57
175 176 2.158986 CCACACATTCAAAAGGGTGCAA 60.159 45.455 0.00 0.00 34.69 4.08
176 177 3.529533 CACACATTCAAAAGGGTGCAAA 58.470 40.909 0.00 0.00 34.69 3.68
177 178 3.309410 CACACATTCAAAAGGGTGCAAAC 59.691 43.478 0.00 0.00 34.69 2.93
178 179 3.197549 ACACATTCAAAAGGGTGCAAACT 59.802 39.130 0.00 0.00 34.69 2.66
179 180 4.404073 ACACATTCAAAAGGGTGCAAACTA 59.596 37.500 0.00 0.00 34.69 2.24
180 181 5.105146 ACACATTCAAAAGGGTGCAAACTAA 60.105 36.000 0.00 0.00 34.69 2.24
181 182 5.814705 CACATTCAAAAGGGTGCAAACTAAA 59.185 36.000 0.00 0.00 0.00 1.85
182 183 6.482973 CACATTCAAAAGGGTGCAAACTAAAT 59.517 34.615 0.00 0.00 0.00 1.40
183 184 6.482973 ACATTCAAAAGGGTGCAAACTAAATG 59.517 34.615 0.00 2.08 0.00 2.32
184 185 4.954875 TCAAAAGGGTGCAAACTAAATGG 58.045 39.130 0.00 0.00 0.00 3.16
185 186 3.401033 AAAGGGTGCAAACTAAATGGC 57.599 42.857 0.00 0.00 0.00 4.40
186 187 2.309136 AGGGTGCAAACTAAATGGCT 57.691 45.000 0.00 0.00 0.00 4.75
187 188 3.449746 AGGGTGCAAACTAAATGGCTA 57.550 42.857 0.00 0.00 0.00 3.93
188 189 3.773560 AGGGTGCAAACTAAATGGCTAA 58.226 40.909 0.00 0.00 0.00 3.09
189 190 4.156477 AGGGTGCAAACTAAATGGCTAAA 58.844 39.130 0.00 0.00 0.00 1.85
190 191 4.021456 AGGGTGCAAACTAAATGGCTAAAC 60.021 41.667 0.00 0.00 0.00 2.01
191 192 4.262249 GGGTGCAAACTAAATGGCTAAACA 60.262 41.667 0.00 0.00 0.00 2.83
192 193 5.478407 GGTGCAAACTAAATGGCTAAACAT 58.522 37.500 0.00 0.00 0.00 2.71
193 194 5.576774 GGTGCAAACTAAATGGCTAAACATC 59.423 40.000 0.00 0.00 0.00 3.06
194 195 5.576774 GTGCAAACTAAATGGCTAAACATCC 59.423 40.000 0.00 0.00 0.00 3.51
195 196 5.109210 GCAAACTAAATGGCTAAACATCCC 58.891 41.667 0.00 0.00 0.00 3.85
196 197 5.337169 GCAAACTAAATGGCTAAACATCCCA 60.337 40.000 0.00 0.00 0.00 4.37
197 198 6.696411 CAAACTAAATGGCTAAACATCCCAA 58.304 36.000 0.00 0.00 31.43 4.12
198 199 6.926630 AACTAAATGGCTAAACATCCCAAA 57.073 33.333 0.00 0.00 31.43 3.28
199 200 6.280855 ACTAAATGGCTAAACATCCCAAAC 57.719 37.500 0.00 0.00 31.43 2.93
200 201 5.777732 ACTAAATGGCTAAACATCCCAAACA 59.222 36.000 0.00 0.00 31.43 2.83
201 202 5.559148 AAATGGCTAAACATCCCAAACAA 57.441 34.783 0.00 0.00 31.43 2.83
202 203 5.760484 AATGGCTAAACATCCCAAACAAT 57.240 34.783 0.00 0.00 31.43 2.71
203 204 5.760484 ATGGCTAAACATCCCAAACAATT 57.240 34.783 0.00 0.00 31.43 2.32
204 205 5.146010 TGGCTAAACATCCCAAACAATTC 57.854 39.130 0.00 0.00 0.00 2.17
205 206 4.590647 TGGCTAAACATCCCAAACAATTCA 59.409 37.500 0.00 0.00 0.00 2.57
206 207 5.248020 TGGCTAAACATCCCAAACAATTCAT 59.752 36.000 0.00 0.00 0.00 2.57
207 208 6.438741 TGGCTAAACATCCCAAACAATTCATA 59.561 34.615 0.00 0.00 0.00 2.15
208 209 7.038729 TGGCTAAACATCCCAAACAATTCATAA 60.039 33.333 0.00 0.00 0.00 1.90
209 210 7.986889 GGCTAAACATCCCAAACAATTCATAAT 59.013 33.333 0.00 0.00 0.00 1.28
213 214 9.874205 AAACATCCCAAACAATTCATAATAGTG 57.126 29.630 0.00 0.00 0.00 2.74
214 215 8.593945 ACATCCCAAACAATTCATAATAGTGT 57.406 30.769 0.00 0.00 0.00 3.55
215 216 8.469200 ACATCCCAAACAATTCATAATAGTGTG 58.531 33.333 0.00 0.00 0.00 3.82
216 217 8.685427 CATCCCAAACAATTCATAATAGTGTGA 58.315 33.333 0.00 0.00 0.00 3.58
217 218 8.821686 TCCCAAACAATTCATAATAGTGTGAT 57.178 30.769 0.00 0.00 0.00 3.06
218 219 9.253832 TCCCAAACAATTCATAATAGTGTGATT 57.746 29.630 0.00 0.00 0.00 2.57
219 220 9.874205 CCCAAACAATTCATAATAGTGTGATTT 57.126 29.630 0.00 0.00 0.00 2.17
222 223 8.931385 AACAATTCATAATAGTGTGATTTGGC 57.069 30.769 20.76 0.00 39.03 4.52
223 224 8.065473 ACAATTCATAATAGTGTGATTTGGCA 57.935 30.769 20.76 0.00 39.03 4.92
224 225 8.698210 ACAATTCATAATAGTGTGATTTGGCAT 58.302 29.630 20.76 5.47 39.03 4.40
227 228 7.439157 TCATAATAGTGTGATTTGGCATAGC 57.561 36.000 0.00 0.00 0.00 2.97
237 238 4.773209 GGCATAGCCCCTTACGAC 57.227 61.111 0.00 0.00 44.06 4.34
238 239 1.300697 GGCATAGCCCCTTACGACG 60.301 63.158 0.00 0.00 44.06 5.12
239 240 1.737816 GCATAGCCCCTTACGACGA 59.262 57.895 0.00 0.00 0.00 4.20
240 241 0.103572 GCATAGCCCCTTACGACGAA 59.896 55.000 0.00 0.00 0.00 3.85
241 242 1.868519 GCATAGCCCCTTACGACGAAG 60.869 57.143 0.00 0.86 0.00 3.79
242 243 1.038280 ATAGCCCCTTACGACGAAGG 58.962 55.000 15.16 15.16 44.96 3.46
243 244 1.669999 TAGCCCCTTACGACGAAGGC 61.670 60.000 16.16 12.83 44.15 4.35
244 245 2.186125 CCCCTTACGACGAAGGCC 59.814 66.667 16.16 0.00 44.15 5.19
245 246 2.652095 CCCCTTACGACGAAGGCCA 61.652 63.158 5.01 0.00 44.15 5.36
246 247 1.520666 CCCTTACGACGAAGGCCAT 59.479 57.895 5.01 0.00 44.15 4.40
247 248 0.810031 CCCTTACGACGAAGGCCATG 60.810 60.000 5.01 0.00 44.15 3.66
248 249 0.108329 CCTTACGACGAAGGCCATGT 60.108 55.000 5.01 0.00 39.70 3.21
249 250 1.674817 CCTTACGACGAAGGCCATGTT 60.675 52.381 5.01 0.00 39.70 2.71
250 251 1.393539 CTTACGACGAAGGCCATGTTG 59.606 52.381 5.01 6.62 0.00 3.33
251 252 1.017177 TACGACGAAGGCCATGTTGC 61.017 55.000 5.01 0.00 0.00 4.17
252 253 2.034879 CGACGAAGGCCATGTTGCT 61.035 57.895 5.01 0.00 0.00 3.91
253 254 1.577328 CGACGAAGGCCATGTTGCTT 61.577 55.000 5.01 0.00 0.00 3.91
254 255 0.169009 GACGAAGGCCATGTTGCTTC 59.831 55.000 5.01 0.00 0.00 3.86
255 256 1.135315 CGAAGGCCATGTTGCTTCG 59.865 57.895 5.01 6.03 40.30 3.79
256 257 1.153958 GAAGGCCATGTTGCTTCGC 60.154 57.895 5.01 0.00 0.00 4.70
257 258 2.855728 GAAGGCCATGTTGCTTCGCG 62.856 60.000 5.01 0.00 0.00 5.87
266 267 4.300457 TGCTTCGCGCAGTTTTTG 57.700 50.000 8.75 0.00 45.47 2.44
267 268 1.724467 TGCTTCGCGCAGTTTTTGA 59.276 47.368 8.75 0.00 45.47 2.69
268 269 0.316937 TGCTTCGCGCAGTTTTTGAG 60.317 50.000 8.75 0.00 45.47 3.02
269 270 0.041312 GCTTCGCGCAGTTTTTGAGA 60.041 50.000 8.75 0.00 38.92 3.27
270 271 1.596954 GCTTCGCGCAGTTTTTGAGAA 60.597 47.619 8.75 0.00 38.92 2.87
271 272 2.715268 CTTCGCGCAGTTTTTGAGAAA 58.285 42.857 8.75 0.00 0.00 2.52
272 273 2.834574 TCGCGCAGTTTTTGAGAAAA 57.165 40.000 8.75 0.00 32.53 2.29
273 274 3.347958 TCGCGCAGTTTTTGAGAAAAT 57.652 38.095 8.75 0.00 37.12 1.82
274 275 3.296628 TCGCGCAGTTTTTGAGAAAATC 58.703 40.909 8.75 0.00 37.12 2.17
275 276 2.405025 CGCGCAGTTTTTGAGAAAATCC 59.595 45.455 8.75 0.00 37.12 3.01
276 277 3.380142 GCGCAGTTTTTGAGAAAATCCA 58.620 40.909 0.30 0.00 37.12 3.41
277 278 3.989817 GCGCAGTTTTTGAGAAAATCCAT 59.010 39.130 0.30 0.00 37.12 3.41
278 279 4.448732 GCGCAGTTTTTGAGAAAATCCATT 59.551 37.500 0.30 0.00 37.12 3.16
279 280 5.613142 GCGCAGTTTTTGAGAAAATCCATTG 60.613 40.000 0.30 0.00 37.12 2.82
280 281 5.107375 CGCAGTTTTTGAGAAAATCCATTGG 60.107 40.000 0.00 0.00 37.12 3.16
281 282 5.179929 GCAGTTTTTGAGAAAATCCATTGGG 59.820 40.000 2.09 0.00 37.12 4.12
282 283 5.702209 CAGTTTTTGAGAAAATCCATTGGGG 59.298 40.000 2.09 0.00 37.12 4.96
283 284 4.906747 TTTTGAGAAAATCCATTGGGGG 57.093 40.909 2.09 0.00 37.22 5.40
284 285 3.843177 TTGAGAAAATCCATTGGGGGA 57.157 42.857 2.09 0.00 42.21 4.81
285 286 3.386932 TGAGAAAATCCATTGGGGGAG 57.613 47.619 2.09 0.00 41.08 4.30
286 287 2.654385 TGAGAAAATCCATTGGGGGAGT 59.346 45.455 2.09 0.00 41.08 3.85
287 288 3.855599 TGAGAAAATCCATTGGGGGAGTA 59.144 43.478 2.09 0.00 41.08 2.59
288 289 4.079787 TGAGAAAATCCATTGGGGGAGTAG 60.080 45.833 2.09 0.00 41.08 2.57
289 290 4.119155 AGAAAATCCATTGGGGGAGTAGA 58.881 43.478 2.09 0.00 41.08 2.59
290 291 4.544152 AGAAAATCCATTGGGGGAGTAGAA 59.456 41.667 2.09 0.00 41.08 2.10
291 292 4.965283 AAATCCATTGGGGGAGTAGAAA 57.035 40.909 2.09 0.00 41.08 2.52
292 293 4.965283 AATCCATTGGGGGAGTAGAAAA 57.035 40.909 2.09 0.00 41.08 2.29
293 294 4.965283 ATCCATTGGGGGAGTAGAAAAA 57.035 40.909 2.09 0.00 41.08 1.94
294 295 4.042271 TCCATTGGGGGAGTAGAAAAAC 57.958 45.455 2.09 0.00 37.22 2.43
295 296 2.752903 CCATTGGGGGAGTAGAAAAACG 59.247 50.000 0.00 0.00 0.00 3.60
296 297 1.900245 TTGGGGGAGTAGAAAAACGC 58.100 50.000 0.00 0.00 0.00 4.84
297 298 1.061546 TGGGGGAGTAGAAAAACGCT 58.938 50.000 0.00 0.00 0.00 5.07
298 299 1.271163 TGGGGGAGTAGAAAAACGCTG 60.271 52.381 0.00 0.00 0.00 5.18
299 300 0.803117 GGGGAGTAGAAAAACGCTGC 59.197 55.000 0.00 0.00 0.00 5.25
300 301 0.442699 GGGAGTAGAAAAACGCTGCG 59.557 55.000 21.91 21.91 0.00 5.18
301 302 1.145803 GGAGTAGAAAAACGCTGCGT 58.854 50.000 23.57 23.57 43.97 5.24
302 303 1.136336 GGAGTAGAAAAACGCTGCGTG 60.136 52.381 29.63 0.00 39.99 5.34
303 304 0.865769 AGTAGAAAAACGCTGCGTGG 59.134 50.000 29.63 0.00 39.99 4.94
304 305 0.724785 GTAGAAAAACGCTGCGTGGC 60.725 55.000 29.63 17.13 39.99 5.01
319 320 2.124695 GGCGAGGCCCCTTTGTAG 60.125 66.667 0.00 0.00 44.06 2.74
320 321 2.824489 GCGAGGCCCCTTTGTAGC 60.824 66.667 0.00 0.00 0.00 3.58
324 325 2.362503 GGCCCCTTTGTAGCCACC 60.363 66.667 0.00 0.00 46.34 4.61
325 326 2.750237 GCCCCTTTGTAGCCACCG 60.750 66.667 0.00 0.00 0.00 4.94
326 327 2.754375 CCCCTTTGTAGCCACCGT 59.246 61.111 0.00 0.00 0.00 4.83
327 328 1.674322 CCCCTTTGTAGCCACCGTG 60.674 63.158 0.00 0.00 0.00 4.94
328 329 2.332654 CCCTTTGTAGCCACCGTGC 61.333 63.158 0.00 0.00 0.00 5.34
329 330 2.332654 CCTTTGTAGCCACCGTGCC 61.333 63.158 0.00 0.00 0.00 5.01
330 331 1.599518 CTTTGTAGCCACCGTGCCA 60.600 57.895 0.00 0.00 0.00 4.92
331 332 1.852067 CTTTGTAGCCACCGTGCCAC 61.852 60.000 0.00 0.00 0.00 5.01
332 333 4.673298 TGTAGCCACCGTGCCACG 62.673 66.667 10.95 10.95 42.11 4.94
349 350 4.366603 GCGAGGTACGGGTTTGTT 57.633 55.556 0.00 0.00 42.83 2.83
350 351 2.156542 GCGAGGTACGGGTTTGTTC 58.843 57.895 0.00 0.00 42.83 3.18
351 352 1.293963 GCGAGGTACGGGTTTGTTCC 61.294 60.000 0.00 0.00 42.83 3.62
352 353 0.033781 CGAGGTACGGGTTTGTTCCA 59.966 55.000 0.00 0.00 38.46 3.53
353 354 1.516161 GAGGTACGGGTTTGTTCCAC 58.484 55.000 0.00 0.00 32.20 4.02
354 355 0.109153 AGGTACGGGTTTGTTCCACC 59.891 55.000 0.00 0.00 32.20 4.61
355 356 0.179023 GGTACGGGTTTGTTCCACCA 60.179 55.000 0.00 0.00 35.80 4.17
356 357 0.946528 GTACGGGTTTGTTCCACCAC 59.053 55.000 0.00 0.00 35.80 4.16
357 358 0.838608 TACGGGTTTGTTCCACCACT 59.161 50.000 0.00 0.00 35.80 4.00
358 359 0.750182 ACGGGTTTGTTCCACCACTG 60.750 55.000 0.00 0.00 35.80 3.66
359 360 1.452145 CGGGTTTGTTCCACCACTGG 61.452 60.000 0.00 0.00 39.23 4.00
360 361 0.106419 GGGTTTGTTCCACCACTGGA 60.106 55.000 0.71 0.00 45.68 3.86
367 368 2.759985 TCCACCACTGGAACTCCTC 58.240 57.895 0.71 0.00 44.26 3.71
368 369 0.191064 TCCACCACTGGAACTCCTCT 59.809 55.000 0.71 0.00 44.26 3.69
369 370 0.610687 CCACCACTGGAACTCCTCTC 59.389 60.000 0.71 0.00 40.55 3.20
370 371 1.638529 CACCACTGGAACTCCTCTCT 58.361 55.000 0.71 0.00 36.82 3.10
371 372 1.548269 CACCACTGGAACTCCTCTCTC 59.452 57.143 0.71 0.00 36.82 3.20
372 373 1.148027 ACCACTGGAACTCCTCTCTCA 59.852 52.381 0.71 0.00 36.82 3.27
373 374 1.824230 CCACTGGAACTCCTCTCTCAG 59.176 57.143 0.00 0.00 36.82 3.35
374 375 1.824230 CACTGGAACTCCTCTCTCAGG 59.176 57.143 0.00 0.00 45.15 3.86
383 384 3.103637 CTCTCTCAGGACGGGTAGG 57.896 63.158 0.00 0.00 0.00 3.18
384 385 0.547075 CTCTCTCAGGACGGGTAGGA 59.453 60.000 0.00 0.00 0.00 2.94
385 386 0.997363 TCTCTCAGGACGGGTAGGAA 59.003 55.000 0.00 0.00 0.00 3.36
386 387 1.569548 TCTCTCAGGACGGGTAGGAAT 59.430 52.381 0.00 0.00 0.00 3.01
387 388 2.781757 TCTCTCAGGACGGGTAGGAATA 59.218 50.000 0.00 0.00 0.00 1.75
388 389 2.885894 CTCTCAGGACGGGTAGGAATAC 59.114 54.545 0.00 0.00 0.00 1.89
389 390 1.962100 CTCAGGACGGGTAGGAATACC 59.038 57.143 0.00 0.00 39.37 2.73
390 391 1.288633 TCAGGACGGGTAGGAATACCA 59.711 52.381 6.77 0.00 41.83 3.25
391 392 2.090943 TCAGGACGGGTAGGAATACCAT 60.091 50.000 6.77 0.00 41.83 3.55
392 393 2.037251 CAGGACGGGTAGGAATACCATG 59.963 54.545 6.77 1.45 41.83 3.66
393 394 2.090943 AGGACGGGTAGGAATACCATGA 60.091 50.000 6.77 0.00 41.83 3.07
394 395 2.701951 GGACGGGTAGGAATACCATGAA 59.298 50.000 6.77 0.00 41.83 2.57
395 396 3.135167 GGACGGGTAGGAATACCATGAAA 59.865 47.826 6.77 0.00 41.83 2.69
396 397 4.384427 GGACGGGTAGGAATACCATGAAAA 60.384 45.833 6.77 0.00 41.83 2.29
397 398 5.182169 ACGGGTAGGAATACCATGAAAAA 57.818 39.130 6.77 0.00 41.83 1.94
398 399 5.762279 ACGGGTAGGAATACCATGAAAAAT 58.238 37.500 6.77 0.00 41.83 1.82
399 400 6.192044 ACGGGTAGGAATACCATGAAAAATT 58.808 36.000 6.77 0.00 41.83 1.82
400 401 7.348033 ACGGGTAGGAATACCATGAAAAATTA 58.652 34.615 6.77 0.00 41.83 1.40
401 402 8.002459 ACGGGTAGGAATACCATGAAAAATTAT 58.998 33.333 6.77 0.00 41.83 1.28
402 403 9.509956 CGGGTAGGAATACCATGAAAAATTATA 57.490 33.333 6.77 0.00 41.83 0.98
490 491 6.775594 AGAACATTTTTATTGGGTCTAGGC 57.224 37.500 0.00 0.00 0.00 3.93
491 492 6.494059 AGAACATTTTTATTGGGTCTAGGCT 58.506 36.000 0.00 0.00 0.00 4.58
492 493 7.639378 AGAACATTTTTATTGGGTCTAGGCTA 58.361 34.615 0.00 0.00 0.00 3.93
493 494 8.113462 AGAACATTTTTATTGGGTCTAGGCTAA 58.887 33.333 0.00 0.00 0.00 3.09
494 495 8.838649 AACATTTTTATTGGGTCTAGGCTAAT 57.161 30.769 0.00 0.00 0.00 1.73
495 496 8.237811 ACATTTTTATTGGGTCTAGGCTAATG 57.762 34.615 0.00 0.00 0.00 1.90
496 497 7.839200 ACATTTTTATTGGGTCTAGGCTAATGT 59.161 33.333 0.00 0.00 0.00 2.71
497 498 7.875327 TTTTTATTGGGTCTAGGCTAATGTC 57.125 36.000 0.00 0.00 0.00 3.06
498 499 6.824958 TTTATTGGGTCTAGGCTAATGTCT 57.175 37.500 0.00 0.00 0.00 3.41
499 500 6.824958 TTATTGGGTCTAGGCTAATGTCTT 57.175 37.500 0.00 0.00 0.00 3.01
500 501 5.717119 ATTGGGTCTAGGCTAATGTCTTT 57.283 39.130 0.00 0.00 0.00 2.52
501 502 5.514500 TTGGGTCTAGGCTAATGTCTTTT 57.486 39.130 0.00 0.00 0.00 2.27
502 503 5.514500 TGGGTCTAGGCTAATGTCTTTTT 57.486 39.130 0.00 0.00 0.00 1.94
541 542 9.543018 GTGAAAATTTTGTTTCTATCCTACTCG 57.457 33.333 8.47 0.00 38.17 4.18
542 543 8.234546 TGAAAATTTTGTTTCTATCCTACTCGC 58.765 33.333 8.47 0.00 38.17 5.03
543 544 7.923414 AAATTTTGTTTCTATCCTACTCGCT 57.077 32.000 0.00 0.00 0.00 4.93
544 545 7.923414 AATTTTGTTTCTATCCTACTCGCTT 57.077 32.000 0.00 0.00 0.00 4.68
545 546 6.963049 TTTTGTTTCTATCCTACTCGCTTC 57.037 37.500 0.00 0.00 0.00 3.86
546 547 4.288670 TGTTTCTATCCTACTCGCTTCG 57.711 45.455 0.00 0.00 0.00 3.79
547 548 3.693085 TGTTTCTATCCTACTCGCTTCGT 59.307 43.478 0.00 0.00 0.00 3.85
548 549 4.201891 TGTTTCTATCCTACTCGCTTCGTC 60.202 45.833 0.00 0.00 0.00 4.20
549 550 2.492012 TCTATCCTACTCGCTTCGTCC 58.508 52.381 0.00 0.00 0.00 4.79
550 551 1.194997 CTATCCTACTCGCTTCGTCCG 59.805 57.143 0.00 0.00 0.00 4.79
551 552 0.463295 ATCCTACTCGCTTCGTCCGA 60.463 55.000 0.00 0.00 0.00 4.55
552 553 0.674581 TCCTACTCGCTTCGTCCGAA 60.675 55.000 1.81 1.81 33.92 4.30
553 554 0.169672 CCTACTCGCTTCGTCCGAAA 59.830 55.000 3.52 0.00 33.92 3.46
554 555 1.202268 CCTACTCGCTTCGTCCGAAAT 60.202 52.381 3.52 0.00 33.92 2.17
555 556 1.846782 CTACTCGCTTCGTCCGAAATG 59.153 52.381 3.52 0.00 33.92 2.32
556 557 0.038526 ACTCGCTTCGTCCGAAATGT 60.039 50.000 3.52 0.00 33.92 2.71
557 558 1.200716 ACTCGCTTCGTCCGAAATGTA 59.799 47.619 3.52 0.00 33.92 2.29
558 559 2.256174 CTCGCTTCGTCCGAAATGTAA 58.744 47.619 3.52 0.00 33.92 2.41
559 560 2.256174 TCGCTTCGTCCGAAATGTAAG 58.744 47.619 3.52 0.00 33.34 2.34
560 561 2.095110 TCGCTTCGTCCGAAATGTAAGA 60.095 45.455 3.52 0.00 33.34 2.10
561 562 2.027688 CGCTTCGTCCGAAATGTAAGAC 59.972 50.000 3.52 0.00 33.34 3.01
562 563 2.347755 GCTTCGTCCGAAATGTAAGACC 59.652 50.000 3.52 0.00 33.34 3.85
563 564 3.581755 CTTCGTCCGAAATGTAAGACCA 58.418 45.455 3.52 0.00 33.34 4.02
564 565 3.880047 TCGTCCGAAATGTAAGACCAT 57.120 42.857 0.00 0.00 0.00 3.55
565 566 4.987408 TCGTCCGAAATGTAAGACCATA 57.013 40.909 0.00 0.00 0.00 2.74
566 567 5.524971 TCGTCCGAAATGTAAGACCATAT 57.475 39.130 0.00 0.00 0.00 1.78
567 568 5.909477 TCGTCCGAAATGTAAGACCATATT 58.091 37.500 0.00 0.00 0.00 1.28
568 569 6.342906 TCGTCCGAAATGTAAGACCATATTT 58.657 36.000 0.00 0.00 0.00 1.40
569 570 6.819649 TCGTCCGAAATGTAAGACCATATTTT 59.180 34.615 0.00 0.00 0.00 1.82
570 571 7.334921 TCGTCCGAAATGTAAGACCATATTTTT 59.665 33.333 0.00 0.00 0.00 1.94
571 572 8.605746 CGTCCGAAATGTAAGACCATATTTTTA 58.394 33.333 0.00 0.00 0.00 1.52
572 573 9.712359 GTCCGAAATGTAAGACCATATTTTTAC 57.288 33.333 0.00 0.00 0.00 2.01
573 574 9.451002 TCCGAAATGTAAGACCATATTTTTACA 57.549 29.630 0.00 0.00 39.49 2.41
574 575 9.498307 CCGAAATGTAAGACCATATTTTTACAC 57.502 33.333 0.00 0.00 38.42 2.90
630 631 9.692325 ATATAAACCAAAGAGCTTTCAGAGAAT 57.308 29.630 0.00 0.00 0.00 2.40
632 633 9.692325 ATAAACCAAAGAGCTTTCAGAGAATAT 57.308 29.630 0.00 0.00 0.00 1.28
634 635 9.692325 AAACCAAAGAGCTTTCAGAGAATATAT 57.308 29.630 0.00 0.00 0.00 0.86
635 636 9.692325 AACCAAAGAGCTTTCAGAGAATATATT 57.308 29.630 0.00 0.00 0.00 1.28
636 637 9.692325 ACCAAAGAGCTTTCAGAGAATATATTT 57.308 29.630 0.00 0.00 0.00 1.40
696 697 8.443953 AAAAAGATCTATAGACCAACAGATGC 57.556 34.615 4.10 0.00 0.00 3.91
697 698 6.992664 AAGATCTATAGACCAACAGATGCT 57.007 37.500 4.10 0.00 0.00 3.79
698 699 6.343716 AGATCTATAGACCAACAGATGCTG 57.656 41.667 4.10 0.00 37.52 4.41
699 700 6.073981 AGATCTATAGACCAACAGATGCTGA 58.926 40.000 4.10 0.00 35.18 4.26
700 701 6.552725 AGATCTATAGACCAACAGATGCTGAA 59.447 38.462 4.10 0.00 35.18 3.02
701 702 6.154203 TCTATAGACCAACAGATGCTGAAG 57.846 41.667 0.00 0.00 35.18 3.02
702 703 1.818642 AGACCAACAGATGCTGAAGC 58.181 50.000 0.82 0.00 42.50 3.86
703 704 0.445436 GACCAACAGATGCTGAAGCG 59.555 55.000 0.82 0.00 45.83 4.68
704 705 0.250467 ACCAACAGATGCTGAAGCGT 60.250 50.000 0.82 0.00 45.83 5.07
744 745 1.408969 GGGGAAACAGCAACAGGAAA 58.591 50.000 0.00 0.00 0.00 3.13
753 754 3.126073 CAGCAACAGGAAAAGAAAAGCC 58.874 45.455 0.00 0.00 0.00 4.35
817 826 1.005394 ATCCGGACACGTTGGACAC 60.005 57.895 6.12 0.00 38.78 3.67
848 857 0.983467 TGATGGTTCAGCAGGCTACA 59.017 50.000 0.00 0.00 0.00 2.74
854 863 1.536073 TTCAGCAGGCTACAGCGAGT 61.536 55.000 0.00 0.00 43.26 4.18
897 906 1.884579 GGCCAACCATATCAGCATCAG 59.115 52.381 0.00 0.00 35.26 2.90
931 940 4.778143 CCGCCCACCAGCAGTACC 62.778 72.222 0.00 0.00 0.00 3.34
932 941 4.778143 CGCCCACCAGCAGTACCC 62.778 72.222 0.00 0.00 0.00 3.69
933 942 3.330720 GCCCACCAGCAGTACCCT 61.331 66.667 0.00 0.00 0.00 4.34
934 943 2.990479 CCCACCAGCAGTACCCTC 59.010 66.667 0.00 0.00 0.00 4.30
935 944 2.579201 CCACCAGCAGTACCCTCG 59.421 66.667 0.00 0.00 0.00 4.63
938 947 1.982938 ACCAGCAGTACCCTCGTCC 60.983 63.158 0.00 0.00 0.00 4.79
939 948 1.682684 CCAGCAGTACCCTCGTCCT 60.683 63.158 0.00 0.00 0.00 3.85
942 951 0.039911 AGCAGTACCCTCGTCCTTCT 59.960 55.000 0.00 0.00 0.00 2.85
948 961 2.312424 ACCCTCGTCCTTCTCTCTTT 57.688 50.000 0.00 0.00 0.00 2.52
951 964 2.425668 CCCTCGTCCTTCTCTCTTTCTC 59.574 54.545 0.00 0.00 0.00 2.87
954 972 3.761752 CTCGTCCTTCTCTCTTTCTCCTT 59.238 47.826 0.00 0.00 0.00 3.36
977 995 3.885901 TCTCTCTCTCTCTCTCTCTCTCG 59.114 52.174 0.00 0.00 0.00 4.04
1111 1141 4.391216 ACAACTGAGCTGAAAATCATCTCG 59.609 41.667 0.00 4.87 41.22 4.04
1123 1153 6.309009 TGAAAATCATCTCGTCTTCTTCTTCG 59.691 38.462 0.00 0.00 0.00 3.79
1124 1154 5.568685 AATCATCTCGTCTTCTTCTTCGA 57.431 39.130 0.00 0.00 0.00 3.71
1125 1155 5.766150 ATCATCTCGTCTTCTTCTTCGAT 57.234 39.130 0.00 0.00 0.00 3.59
1127 1157 4.396478 TCATCTCGTCTTCTTCTTCGATGT 59.604 41.667 0.00 0.00 0.00 3.06
1128 1158 4.084889 TCTCGTCTTCTTCTTCGATGTG 57.915 45.455 0.00 0.00 0.00 3.21
1130 1160 4.023107 TCTCGTCTTCTTCTTCGATGTGTT 60.023 41.667 0.00 0.00 0.00 3.32
1149 1179 3.631686 TGTTTGTTCACTGATGGAACTGG 59.368 43.478 6.80 0.00 43.84 4.00
1158 1188 1.837439 TGATGGAACTGGCCGACTAAT 59.163 47.619 0.00 0.00 0.00 1.73
1159 1189 3.035363 TGATGGAACTGGCCGACTAATA 58.965 45.455 0.00 0.00 0.00 0.98
1160 1190 3.452990 TGATGGAACTGGCCGACTAATAA 59.547 43.478 0.00 0.00 0.00 1.40
1161 1191 3.255969 TGGAACTGGCCGACTAATAAC 57.744 47.619 0.00 0.00 0.00 1.89
1162 1192 2.568062 TGGAACTGGCCGACTAATAACA 59.432 45.455 0.00 0.00 0.00 2.41
1355 1408 0.247460 TTCAGACCGAGACATGGCTG 59.753 55.000 5.31 0.00 34.20 4.85
1383 1438 1.539388 CAGACTTGGTTGCGGCAATAA 59.461 47.619 19.53 15.35 0.00 1.40
1386 1441 1.476488 ACTTGGTTGCGGCAATAATCC 59.524 47.619 19.53 15.17 0.00 3.01
1392 1448 0.820871 TGCGGCAATAATCCCCAAAC 59.179 50.000 0.00 0.00 0.00 2.93
1403 1459 7.486647 CAATAATCCCCAAACAGAGATGAAAG 58.513 38.462 0.00 0.00 0.00 2.62
1409 1465 3.120408 CCAAACAGAGATGAAAGTCGCAG 60.120 47.826 0.00 0.00 0.00 5.18
1416 1472 3.034635 AGATGAAAGTCGCAGGATACCT 58.965 45.455 0.00 0.00 37.17 3.08
1417 1473 4.215908 AGATGAAAGTCGCAGGATACCTA 58.784 43.478 0.00 0.00 29.64 3.08
1427 1483 1.760613 CAGGATACCTACCGGCTTGAA 59.239 52.381 0.00 0.00 29.64 2.69
1428 1484 2.040178 AGGATACCTACCGGCTTGAAG 58.960 52.381 0.00 0.00 28.47 3.02
1435 1491 0.618458 TACCGGCTTGAAGGCTGATT 59.382 50.000 16.45 0.00 40.74 2.57
1439 1495 2.159379 CCGGCTTGAAGGCTGATTAAAC 60.159 50.000 16.89 0.00 40.74 2.01
1441 1497 2.166459 GGCTTGAAGGCTGATTAAACCC 59.834 50.000 11.88 0.00 37.85 4.11
1452 1508 4.495422 CTGATTAAACCCCCTCGATATCG 58.505 47.826 19.14 19.14 41.45 2.92
1476 1532 3.239449 TGGCTAGTGATTATGATCCCGT 58.761 45.455 0.00 0.00 0.00 5.28
1481 1537 1.003233 GTGATTATGATCCCGTCCCCC 59.997 57.143 0.00 0.00 0.00 5.40
1482 1538 1.132527 TGATTATGATCCCGTCCCCCT 60.133 52.381 0.00 0.00 0.00 4.79
1493 1552 0.902531 CGTCCCCCTGTCACAACTAT 59.097 55.000 0.00 0.00 0.00 2.12
1506 1565 4.033817 GTCACAACTATCATGCTCTGCTTC 59.966 45.833 0.00 0.00 0.00 3.86
1514 1573 3.036819 TCATGCTCTGCTTCCTACTGAT 58.963 45.455 0.00 0.00 0.00 2.90
1515 1574 3.453717 TCATGCTCTGCTTCCTACTGATT 59.546 43.478 0.00 0.00 0.00 2.57
1516 1575 3.988976 TGCTCTGCTTCCTACTGATTT 57.011 42.857 0.00 0.00 0.00 2.17
1517 1576 4.292186 TGCTCTGCTTCCTACTGATTTT 57.708 40.909 0.00 0.00 0.00 1.82
1518 1577 4.655963 TGCTCTGCTTCCTACTGATTTTT 58.344 39.130 0.00 0.00 0.00 1.94
1620 1679 2.851263 TCCGTACCAATTCAAGCAGT 57.149 45.000 0.00 0.00 0.00 4.40
1623 1682 2.584791 CGTACCAATTCAAGCAGTTGC 58.415 47.619 0.00 0.00 42.49 4.17
1637 1696 2.224161 GCAGTTGCTCCCGATTCTAGAT 60.224 50.000 0.00 0.00 38.21 1.98
1639 1698 4.501571 GCAGTTGCTCCCGATTCTAGATAA 60.502 45.833 0.00 0.00 38.21 1.75
1643 1702 5.871396 TGCTCCCGATTCTAGATAAAACT 57.129 39.130 0.00 0.00 0.00 2.66
1652 1711 8.744011 CCGATTCTAGATAAAACTACTTGAACG 58.256 37.037 0.00 0.00 31.22 3.95
1667 1726 5.657474 ACTTGAACGTAGACAGTTTGAGAA 58.343 37.500 0.00 0.00 31.14 2.87
1699 1759 5.239306 TGACTTGAATGCAGACTAAAACAGG 59.761 40.000 0.00 0.00 0.00 4.00
1700 1760 4.022849 ACTTGAATGCAGACTAAAACAGGC 60.023 41.667 0.00 0.00 0.00 4.85
1738 1798 1.255882 CCTTTTACATGGGCACTGCA 58.744 50.000 2.82 0.00 0.00 4.41
1739 1799 1.826720 CCTTTTACATGGGCACTGCAT 59.173 47.619 2.82 0.00 0.00 3.96
1740 1800 2.159198 CCTTTTACATGGGCACTGCATC 60.159 50.000 2.82 0.00 0.00 3.91
1743 1803 2.212812 TACATGGGCACTGCATCAAA 57.787 45.000 2.82 0.00 0.00 2.69
1744 1804 1.563924 ACATGGGCACTGCATCAAAT 58.436 45.000 2.82 0.00 0.00 2.32
1745 1805 1.903860 ACATGGGCACTGCATCAAATT 59.096 42.857 2.82 0.00 0.00 1.82
1746 1806 2.093869 ACATGGGCACTGCATCAAATTC 60.094 45.455 2.82 0.00 0.00 2.17
1747 1807 0.896923 TGGGCACTGCATCAAATTCC 59.103 50.000 2.82 0.00 0.00 3.01
1748 1808 0.896923 GGGCACTGCATCAAATTCCA 59.103 50.000 2.82 0.00 0.00 3.53
1749 1809 1.404583 GGGCACTGCATCAAATTCCAC 60.405 52.381 2.82 0.00 0.00 4.02
1750 1810 1.273048 GGCACTGCATCAAATTCCACA 59.727 47.619 2.82 0.00 0.00 4.17
1751 1811 2.093869 GGCACTGCATCAAATTCCACAT 60.094 45.455 2.82 0.00 0.00 3.21
1752 1812 2.927477 GCACTGCATCAAATTCCACATG 59.073 45.455 0.00 0.00 0.00 3.21
1753 1813 3.615592 GCACTGCATCAAATTCCACATGT 60.616 43.478 0.00 0.00 0.00 3.21
1754 1814 4.380761 GCACTGCATCAAATTCCACATGTA 60.381 41.667 0.00 0.00 0.00 2.29
1755 1815 5.680408 GCACTGCATCAAATTCCACATGTAT 60.680 40.000 0.00 0.00 0.00 2.29
1756 1816 6.459985 GCACTGCATCAAATTCCACATGTATA 60.460 38.462 0.00 0.00 0.00 1.47
1757 1817 6.914215 CACTGCATCAAATTCCACATGTATAC 59.086 38.462 0.00 0.00 0.00 1.47
1758 1818 6.830324 ACTGCATCAAATTCCACATGTATACT 59.170 34.615 0.00 0.00 0.00 2.12
1759 1819 7.030075 TGCATCAAATTCCACATGTATACTG 57.970 36.000 0.00 2.93 0.00 2.74
1760 1820 6.039605 TGCATCAAATTCCACATGTATACTGG 59.960 38.462 0.00 3.91 0.00 4.00
1761 1821 6.262944 GCATCAAATTCCACATGTATACTGGA 59.737 38.462 7.98 7.98 31.94 3.86
1762 1822 7.040201 GCATCAAATTCCACATGTATACTGGAT 60.040 37.037 11.89 0.00 33.99 3.41
1763 1823 7.806409 TCAAATTCCACATGTATACTGGATG 57.194 36.000 11.89 8.55 33.99 3.51
1764 1824 6.262944 TCAAATTCCACATGTATACTGGATGC 59.737 38.462 11.89 0.00 33.99 3.91
1765 1825 5.573380 ATTCCACATGTATACTGGATGCT 57.427 39.130 11.89 0.59 33.99 3.79
1766 1826 4.607293 TCCACATGTATACTGGATGCTC 57.393 45.455 7.98 0.00 0.00 4.26
1767 1827 3.966665 TCCACATGTATACTGGATGCTCA 59.033 43.478 7.98 0.00 0.00 4.26
1768 1828 4.408596 TCCACATGTATACTGGATGCTCAA 59.591 41.667 7.98 0.00 0.00 3.02
1769 1829 5.072193 TCCACATGTATACTGGATGCTCAAT 59.928 40.000 7.98 0.00 0.00 2.57
1770 1830 5.180680 CCACATGTATACTGGATGCTCAATG 59.819 44.000 0.00 0.00 0.00 2.82
1771 1831 4.758674 ACATGTATACTGGATGCTCAATGC 59.241 41.667 0.00 0.00 43.25 3.56
1772 1832 4.694760 TGTATACTGGATGCTCAATGCT 57.305 40.909 4.17 0.00 43.37 3.79
1773 1833 4.635223 TGTATACTGGATGCTCAATGCTC 58.365 43.478 4.17 0.00 43.37 4.26
1774 1834 3.851458 ATACTGGATGCTCAATGCTCA 57.149 42.857 0.00 0.00 43.37 4.26
1775 1835 2.730934 ACTGGATGCTCAATGCTCAT 57.269 45.000 0.00 0.00 43.37 2.90
1776 1836 2.298610 ACTGGATGCTCAATGCTCATG 58.701 47.619 0.00 0.00 43.37 3.07
1777 1837 1.001268 CTGGATGCTCAATGCTCATGC 60.001 52.381 0.00 0.84 43.37 4.06
1796 1856 1.917273 CAAGAATTCTTGCCATGGCG 58.083 50.000 29.90 18.27 45.59 5.69
1797 1857 1.473677 CAAGAATTCTTGCCATGGCGA 59.526 47.619 29.90 28.19 45.59 5.54
1798 1858 1.838112 AGAATTCTTGCCATGGCGAA 58.162 45.000 30.87 26.95 45.51 4.70
1799 1859 2.170166 AGAATTCTTGCCATGGCGAAA 58.830 42.857 30.87 23.40 45.51 3.46
1800 1860 2.094545 AGAATTCTTGCCATGGCGAAAC 60.095 45.455 30.87 22.85 45.51 2.78
1975 2037 8.110860 ACTACCCAACAGTCAAAATCTTAATG 57.889 34.615 0.00 0.00 0.00 1.90
2011 2073 1.592400 CTCGAGACCCGTTGCCTGTA 61.592 60.000 6.58 0.00 39.75 2.74
2744 2810 4.977963 CGCAGAATGAACATGAAACAGTTT 59.022 37.500 0.00 0.00 39.69 2.66
2757 2823 7.816995 ACATGAAACAGTTTATGTGTTTGTGTT 59.183 29.630 14.98 0.00 45.87 3.32
2758 2824 9.295214 CATGAAACAGTTTATGTGTTTGTGTTA 57.705 29.630 5.96 0.00 45.87 2.41
2862 2932 6.327279 AGGCACTTACAAAACCTTATGTTC 57.673 37.500 0.00 0.00 30.97 3.18
2865 2935 5.629435 GCACTTACAAAACCTTATGTTCAGC 59.371 40.000 0.00 0.00 35.67 4.26
2899 2983 2.637382 CCATAGGCACCCAAAAAGGTTT 59.363 45.455 0.00 0.00 38.39 3.27
2903 2987 1.760029 GGCACCCAAAAAGGTTTGAGA 59.240 47.619 0.81 0.00 45.99 3.27
2956 3041 5.581350 TGCATAAATATGGGTCATCTCCA 57.419 39.130 2.82 0.00 38.82 3.86
2966 3051 0.321919 GTCATCTCCAACAGCTGCCA 60.322 55.000 15.27 0.00 0.00 4.92
2967 3052 0.321919 TCATCTCCAACAGCTGCCAC 60.322 55.000 15.27 0.00 0.00 5.01
2968 3053 0.607217 CATCTCCAACAGCTGCCACA 60.607 55.000 15.27 0.00 0.00 4.17
3004 3107 6.623486 TGCACTTTCCATCTCAAATAACATG 58.377 36.000 0.00 0.00 0.00 3.21
3051 3154 9.202273 TCAAACATGACTTAAATATGCCAAAAC 57.798 29.630 0.00 0.00 0.00 2.43
3053 3156 9.723601 AAACATGACTTAAATATGCCAAAACAT 57.276 25.926 0.00 0.00 0.00 2.71
3055 3158 9.801873 ACATGACTTAAATATGCCAAAACATAC 57.198 29.630 0.00 0.00 35.42 2.39
3092 3198 8.365399 TCTATCAATCCACACGATCAAATTAC 57.635 34.615 0.00 0.00 0.00 1.89
3095 3201 7.534085 TCAATCCACACGATCAAATTACTAC 57.466 36.000 0.00 0.00 0.00 2.73
3099 3205 8.818141 ATCCACACGATCAAATTACTACATAG 57.182 34.615 0.00 0.00 0.00 2.23
3101 3207 8.255206 TCCACACGATCAAATTACTACATAGTT 58.745 33.333 0.00 0.00 37.73 2.24
3102 3208 8.879759 CCACACGATCAAATTACTACATAGTTT 58.120 33.333 0.00 0.00 37.73 2.66
3127 3303 6.172136 TCATTCAAACCCACAACATCAAAT 57.828 33.333 0.00 0.00 0.00 2.32
3136 3312 3.869832 CCACAACATCAAATGCAACACAA 59.130 39.130 0.00 0.00 0.00 3.33
3140 3316 6.412362 CACAACATCAAATGCAACACAAATTG 59.588 34.615 0.00 0.00 32.97 2.32
3151 3327 5.640783 TGCAACACAAATTGTTCATGAAACA 59.359 32.000 10.35 8.08 46.05 2.83
3152 3328 6.315642 TGCAACACAAATTGTTCATGAAACAT 59.684 30.769 10.35 2.16 46.05 2.71
3187 3363 6.529829 GTCTTTTTCAGCACACAATACAACAA 59.470 34.615 0.00 0.00 0.00 2.83
3233 3409 8.470805 ACAAACATAGAGATACAACTAGGACTG 58.529 37.037 0.00 0.00 0.00 3.51
3234 3410 8.687242 CAAACATAGAGATACAACTAGGACTGA 58.313 37.037 0.00 0.00 0.00 3.41
3260 3436 3.122480 TCCCATATCATGTCCACCACTT 58.878 45.455 0.00 0.00 0.00 3.16
3269 3445 1.625315 TGTCCACCACTTCTCCATGAG 59.375 52.381 0.00 0.00 0.00 2.90
3297 3473 7.819415 TCTTTTTGAAGATCATCACGTGTATCT 59.181 33.333 16.51 17.80 0.00 1.98
3298 3474 8.996024 TTTTTGAAGATCATCACGTGTATCTA 57.004 30.769 22.07 11.35 29.99 1.98
3324 3500 8.982723 ACATCTATAATGTGATGGTATACCTCC 58.017 37.037 22.41 13.96 42.96 4.30
3326 3502 8.966155 TCTATAATGTGATGGTATACCTCCAA 57.034 34.615 22.41 2.65 38.52 3.53
3331 3507 4.947388 TGTGATGGTATACCTCCAAAAAGC 59.053 41.667 22.41 4.07 38.52 3.51
3338 3514 5.124936 GGTATACCTCCAAAAAGCGTTCAAT 59.875 40.000 15.09 0.00 0.00 2.57
3341 3517 4.119136 ACCTCCAAAAAGCGTTCAATTTG 58.881 39.130 0.00 0.00 33.62 2.32
3353 3529 3.004734 CGTTCAATTTGGTCTTGCCTTCT 59.995 43.478 0.00 0.00 38.35 2.85
3357 3533 6.916360 TCAATTTGGTCTTGCCTTCTAATT 57.084 33.333 0.00 0.00 38.35 1.40
3359 3535 6.493115 TCAATTTGGTCTTGCCTTCTAATTGA 59.507 34.615 0.00 0.00 38.09 2.57
3366 3542 0.373716 GCCTTCTAATTGACCGCACG 59.626 55.000 0.00 0.00 0.00 5.34
3387 3563 3.730662 CGGTGTAATTCAAATCTTGCCCG 60.731 47.826 0.00 0.00 0.00 6.13
3424 3600 7.118390 CGAAAGACTTGATCATTCAAAGTACCT 59.882 37.037 0.00 0.00 41.22 3.08
3425 3601 7.913674 AAGACTTGATCATTCAAAGTACCTC 57.086 36.000 0.00 0.00 41.22 3.85
3426 3602 7.009179 AGACTTGATCATTCAAAGTACCTCA 57.991 36.000 0.00 0.00 41.22 3.86
3427 3603 6.876257 AGACTTGATCATTCAAAGTACCTCAC 59.124 38.462 0.00 0.00 41.22 3.51
3428 3604 6.773638 ACTTGATCATTCAAAGTACCTCACT 58.226 36.000 0.00 0.00 41.22 3.41
3429 3605 6.652481 ACTTGATCATTCAAAGTACCTCACTG 59.348 38.462 0.00 0.00 41.22 3.66
3430 3606 5.491070 TGATCATTCAAAGTACCTCACTGG 58.509 41.667 0.00 0.00 37.63 4.00
3431 3607 5.248248 TGATCATTCAAAGTACCTCACTGGA 59.752 40.000 0.00 0.00 37.63 3.86
3432 3608 5.560722 TCATTCAAAGTACCTCACTGGAA 57.439 39.130 0.00 0.00 37.63 3.53
3433 3609 5.305585 TCATTCAAAGTACCTCACTGGAAC 58.694 41.667 0.00 0.00 37.63 3.62
3434 3610 3.380479 TCAAAGTACCTCACTGGAACG 57.620 47.619 0.00 0.00 37.63 3.95
3435 3611 2.960384 TCAAAGTACCTCACTGGAACGA 59.040 45.455 0.00 0.00 37.63 3.85
3436 3612 3.005472 TCAAAGTACCTCACTGGAACGAG 59.995 47.826 0.00 0.00 37.63 4.18
3437 3613 2.289592 AGTACCTCACTGGAACGAGT 57.710 50.000 0.00 0.00 39.71 4.18
3438 3614 3.430042 AGTACCTCACTGGAACGAGTA 57.570 47.619 0.00 0.00 39.71 2.59
3439 3615 3.965694 AGTACCTCACTGGAACGAGTAT 58.034 45.455 0.00 0.00 39.71 2.12
3440 3616 4.342359 AGTACCTCACTGGAACGAGTATT 58.658 43.478 0.00 0.00 39.71 1.89
3441 3617 3.870633 ACCTCACTGGAACGAGTATTC 57.129 47.619 0.00 0.00 39.71 1.75
3442 3618 3.432378 ACCTCACTGGAACGAGTATTCT 58.568 45.455 0.00 0.00 39.71 2.40
3504 3680 4.876107 TCCATTCTCTCCATAAAAACTCGC 59.124 41.667 0.00 0.00 0.00 5.03
3512 3688 3.372822 TCCATAAAAACTCGCGGCTAAAG 59.627 43.478 6.13 0.00 0.00 1.85
3542 3718 0.449388 CATGCTTCGGGCTCTTGTTC 59.551 55.000 3.33 0.00 42.39 3.18
3563 3739 5.970317 TCTTGTGCATTGTCAAGATCAAT 57.030 34.783 12.13 0.00 43.02 2.57
3573 3749 8.729529 CATTGTCAAGATCAATGCAATATCTC 57.270 34.615 8.69 0.18 43.18 2.75
3597 3773 4.398319 CTCCTCCTCTTCATACTCCTCTC 58.602 52.174 0.00 0.00 0.00 3.20
3601 3777 4.282496 TCCTCTTCATACTCCTCTCCAAC 58.718 47.826 0.00 0.00 0.00 3.77
3614 3790 1.954382 TCTCCAACGAGGTATCATCGG 59.046 52.381 8.51 0.00 44.36 4.18
3619 3795 3.555956 CCAACGAGGTATCATCGGAAAAG 59.444 47.826 8.51 0.00 44.36 2.27
3660 3836 6.978338 TCTTGTACACTCGAAACTCACTATT 58.022 36.000 0.00 0.00 0.00 1.73
3674 3850 7.763172 AACTCACTATTAAGCTCAATCTTCG 57.237 36.000 0.00 0.00 0.00 3.79
3678 3854 5.812642 CACTATTAAGCTCAATCTTCGGTGT 59.187 40.000 0.00 0.00 0.00 4.16
3685 3861 6.710597 AGCTCAATCTTCGGTGTATAACTA 57.289 37.500 0.00 0.00 0.00 2.24
3693 3869 7.279750 TCTTCGGTGTATAACTACATATGCA 57.720 36.000 1.58 0.00 39.93 3.96
3709 3885 5.693104 ACATATGCAAAGAAAAGCACAACAG 59.307 36.000 1.58 0.00 44.49 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.291566 TCCCTCAGTTTTTAAGAACCAATGTA 58.708 34.615 5.31 0.00 0.00 2.29
3 4 7.669089 TTTCCCTCAGTTTTTAAGAACCAAT 57.331 32.000 5.31 0.00 0.00 3.16
4 5 7.669089 ATTTCCCTCAGTTTTTAAGAACCAA 57.331 32.000 5.31 0.00 0.00 3.67
5 6 8.002459 AGTATTTCCCTCAGTTTTTAAGAACCA 58.998 33.333 5.31 0.00 0.00 3.67
6 7 8.405418 AGTATTTCCCTCAGTTTTTAAGAACC 57.595 34.615 5.31 0.00 0.00 3.62
9 10 9.211485 CGTAAGTATTTCCCTCAGTTTTTAAGA 57.789 33.333 0.00 0.00 0.00 2.10
10 11 7.961283 GCGTAAGTATTTCCCTCAGTTTTTAAG 59.039 37.037 0.00 0.00 41.68 1.85
11 12 7.662669 AGCGTAAGTATTTCCCTCAGTTTTTAA 59.337 33.333 0.00 0.00 41.68 1.52
12 13 7.163441 AGCGTAAGTATTTCCCTCAGTTTTTA 58.837 34.615 0.00 0.00 41.68 1.52
13 14 6.002082 AGCGTAAGTATTTCCCTCAGTTTTT 58.998 36.000 0.00 0.00 41.68 1.94
14 15 5.557866 AGCGTAAGTATTTCCCTCAGTTTT 58.442 37.500 0.00 0.00 41.68 2.43
15 16 5.161943 AGCGTAAGTATTTCCCTCAGTTT 57.838 39.130 0.00 0.00 41.68 2.66
16 17 4.820894 AGCGTAAGTATTTCCCTCAGTT 57.179 40.909 0.00 0.00 41.68 3.16
17 18 4.954826 AGTAGCGTAAGTATTTCCCTCAGT 59.045 41.667 0.00 0.00 41.68 3.41
18 19 5.517322 AGTAGCGTAAGTATTTCCCTCAG 57.483 43.478 0.00 0.00 41.68 3.35
19 20 5.927281 AAGTAGCGTAAGTATTTCCCTCA 57.073 39.130 0.00 0.00 41.68 3.86
20 21 6.104665 ACAAAGTAGCGTAAGTATTTCCCTC 58.895 40.000 0.00 0.00 41.68 4.30
21 22 6.046290 ACAAAGTAGCGTAAGTATTTCCCT 57.954 37.500 0.00 0.00 41.68 4.20
22 23 6.540205 CAACAAAGTAGCGTAAGTATTTCCC 58.460 40.000 0.00 0.00 41.68 3.97
23 24 6.019762 GCAACAAAGTAGCGTAAGTATTTCC 58.980 40.000 0.00 0.00 41.68 3.13
24 25 6.595794 TGCAACAAAGTAGCGTAAGTATTTC 58.404 36.000 0.00 0.00 41.68 2.17
25 26 6.548441 TGCAACAAAGTAGCGTAAGTATTT 57.452 33.333 0.00 0.00 41.68 1.40
26 27 6.370442 TGATGCAACAAAGTAGCGTAAGTATT 59.630 34.615 0.00 0.00 41.68 1.89
27 28 5.872617 TGATGCAACAAAGTAGCGTAAGTAT 59.127 36.000 0.00 0.00 41.68 2.12
28 29 5.231702 TGATGCAACAAAGTAGCGTAAGTA 58.768 37.500 0.00 0.00 41.68 2.24
29 30 4.062293 TGATGCAACAAAGTAGCGTAAGT 58.938 39.130 0.00 0.00 41.68 2.24
30 31 4.661993 TGATGCAACAAAGTAGCGTAAG 57.338 40.909 0.00 0.00 43.44 2.34
31 32 4.094294 GGATGATGCAACAAAGTAGCGTAA 59.906 41.667 0.00 0.00 0.00 3.18
32 33 3.621268 GGATGATGCAACAAAGTAGCGTA 59.379 43.478 0.00 0.00 0.00 4.42
33 34 2.420022 GGATGATGCAACAAAGTAGCGT 59.580 45.455 0.00 0.00 0.00 5.07
34 35 2.223340 GGGATGATGCAACAAAGTAGCG 60.223 50.000 0.00 0.00 0.00 4.26
35 36 3.019564 AGGGATGATGCAACAAAGTAGC 58.980 45.455 0.00 0.00 0.00 3.58
36 37 4.096984 GGAAGGGATGATGCAACAAAGTAG 59.903 45.833 0.00 0.00 0.00 2.57
37 38 4.016444 GGAAGGGATGATGCAACAAAGTA 58.984 43.478 0.00 0.00 0.00 2.24
38 39 2.827921 GGAAGGGATGATGCAACAAAGT 59.172 45.455 0.00 0.00 0.00 2.66
39 40 3.094572 AGGAAGGGATGATGCAACAAAG 58.905 45.455 0.00 0.00 0.00 2.77
40 41 3.091545 GAGGAAGGGATGATGCAACAAA 58.908 45.455 0.00 0.00 0.00 2.83
41 42 2.621407 GGAGGAAGGGATGATGCAACAA 60.621 50.000 0.00 0.00 0.00 2.83
42 43 1.064463 GGAGGAAGGGATGATGCAACA 60.064 52.381 0.00 0.00 0.00 3.33
43 44 1.213926 AGGAGGAAGGGATGATGCAAC 59.786 52.381 0.00 0.00 0.00 4.17
44 45 1.492176 GAGGAGGAAGGGATGATGCAA 59.508 52.381 0.00 0.00 0.00 4.08
45 46 1.135094 GAGGAGGAAGGGATGATGCA 58.865 55.000 0.00 0.00 0.00 3.96
46 47 0.034616 CGAGGAGGAAGGGATGATGC 59.965 60.000 0.00 0.00 0.00 3.91
47 48 0.683973 CCGAGGAGGAAGGGATGATG 59.316 60.000 0.00 0.00 45.00 3.07
48 49 3.155897 CCGAGGAGGAAGGGATGAT 57.844 57.895 0.00 0.00 45.00 2.45
49 50 4.707584 CCGAGGAGGAAGGGATGA 57.292 61.111 0.00 0.00 45.00 2.92
53 54 0.696501 TTTTTCCCGAGGAGGAAGGG 59.303 55.000 0.00 0.00 46.44 3.95
54 55 1.613520 GGTTTTTCCCGAGGAGGAAGG 60.614 57.143 0.00 0.00 46.44 3.46
55 56 1.073284 TGGTTTTTCCCGAGGAGGAAG 59.927 52.381 0.00 0.00 46.44 3.46
56 57 1.142060 TGGTTTTTCCCGAGGAGGAA 58.858 50.000 0.00 0.00 44.30 3.36
57 58 1.142060 TTGGTTTTTCCCGAGGAGGA 58.858 50.000 0.00 0.00 45.00 3.71
58 59 1.244816 GTTGGTTTTTCCCGAGGAGG 58.755 55.000 0.00 0.00 40.63 4.30
59 60 0.872388 CGTTGGTTTTTCCCGAGGAG 59.128 55.000 0.00 0.00 31.21 3.69
60 61 1.167781 GCGTTGGTTTTTCCCGAGGA 61.168 55.000 0.00 0.00 34.77 3.71
61 62 1.284715 GCGTTGGTTTTTCCCGAGG 59.715 57.895 0.00 0.00 34.77 4.63
62 63 0.040425 CTGCGTTGGTTTTTCCCGAG 60.040 55.000 0.00 0.00 34.77 4.63
63 64 0.748729 ACTGCGTTGGTTTTTCCCGA 60.749 50.000 0.00 0.00 34.77 5.14
64 65 0.593773 CACTGCGTTGGTTTTTCCCG 60.594 55.000 0.00 0.00 34.77 5.14
65 66 0.874175 GCACTGCGTTGGTTTTTCCC 60.874 55.000 0.00 0.00 34.77 3.97
66 67 0.102300 AGCACTGCGTTGGTTTTTCC 59.898 50.000 0.00 0.00 0.00 3.13
67 68 1.202245 TGAGCACTGCGTTGGTTTTTC 60.202 47.619 0.00 0.00 0.00 2.29
68 69 0.814457 TGAGCACTGCGTTGGTTTTT 59.186 45.000 0.00 0.00 0.00 1.94
69 70 0.814457 TTGAGCACTGCGTTGGTTTT 59.186 45.000 0.00 0.00 0.00 2.43
70 71 0.381801 CTTGAGCACTGCGTTGGTTT 59.618 50.000 0.00 0.00 0.00 3.27
71 72 0.463654 TCTTGAGCACTGCGTTGGTT 60.464 50.000 0.00 0.00 0.00 3.67
72 73 0.882042 CTCTTGAGCACTGCGTTGGT 60.882 55.000 0.00 0.00 0.00 3.67
73 74 1.572085 CCTCTTGAGCACTGCGTTGG 61.572 60.000 0.00 0.00 0.00 3.77
74 75 0.882042 ACCTCTTGAGCACTGCGTTG 60.882 55.000 0.00 0.00 0.00 4.10
75 76 0.679505 TACCTCTTGAGCACTGCGTT 59.320 50.000 0.00 0.00 0.00 4.84
76 77 0.244994 CTACCTCTTGAGCACTGCGT 59.755 55.000 0.00 0.00 0.00 5.24
77 78 1.080995 GCTACCTCTTGAGCACTGCG 61.081 60.000 0.00 0.00 38.62 5.18
78 79 0.036952 TGCTACCTCTTGAGCACTGC 60.037 55.000 0.00 0.00 43.64 4.40
82 83 2.104792 AGTGTTTGCTACCTCTTGAGCA 59.895 45.455 0.00 0.00 46.74 4.26
83 84 2.772287 AGTGTTTGCTACCTCTTGAGC 58.228 47.619 0.00 0.00 39.25 4.26
84 85 5.542779 AGTTAGTGTTTGCTACCTCTTGAG 58.457 41.667 0.00 0.00 0.00 3.02
85 86 5.546621 AGTTAGTGTTTGCTACCTCTTGA 57.453 39.130 0.00 0.00 0.00 3.02
86 87 5.992217 AGAAGTTAGTGTTTGCTACCTCTTG 59.008 40.000 0.00 0.00 0.00 3.02
87 88 6.176014 AGAAGTTAGTGTTTGCTACCTCTT 57.824 37.500 0.00 0.00 0.00 2.85
88 89 5.810080 AGAAGTTAGTGTTTGCTACCTCT 57.190 39.130 0.00 0.00 0.00 3.69
89 90 5.989777 TCAAGAAGTTAGTGTTTGCTACCTC 59.010 40.000 0.00 0.00 0.00 3.85
90 91 5.925509 TCAAGAAGTTAGTGTTTGCTACCT 58.074 37.500 0.00 0.00 0.00 3.08
91 92 6.803154 ATCAAGAAGTTAGTGTTTGCTACC 57.197 37.500 0.00 0.00 0.00 3.18
143 144 9.874205 CCTTTTGAATGTGTGGTAATTATGATT 57.126 29.630 0.00 0.00 0.00 2.57
144 145 8.477256 CCCTTTTGAATGTGTGGTAATTATGAT 58.523 33.333 0.00 0.00 0.00 2.45
145 146 7.453126 ACCCTTTTGAATGTGTGGTAATTATGA 59.547 33.333 0.00 0.00 0.00 2.15
146 147 7.545265 CACCCTTTTGAATGTGTGGTAATTATG 59.455 37.037 0.00 0.00 0.00 1.90
147 148 7.610865 CACCCTTTTGAATGTGTGGTAATTAT 58.389 34.615 0.00 0.00 0.00 1.28
148 149 6.517529 GCACCCTTTTGAATGTGTGGTAATTA 60.518 38.462 0.00 0.00 0.00 1.40
149 150 5.741673 GCACCCTTTTGAATGTGTGGTAATT 60.742 40.000 0.00 0.00 0.00 1.40
150 151 4.262420 GCACCCTTTTGAATGTGTGGTAAT 60.262 41.667 0.00 0.00 0.00 1.89
151 152 3.068873 GCACCCTTTTGAATGTGTGGTAA 59.931 43.478 0.00 0.00 0.00 2.85
152 153 2.625790 GCACCCTTTTGAATGTGTGGTA 59.374 45.455 0.00 0.00 0.00 3.25
153 154 1.412343 GCACCCTTTTGAATGTGTGGT 59.588 47.619 0.00 0.00 0.00 4.16
154 155 1.411977 TGCACCCTTTTGAATGTGTGG 59.588 47.619 0.00 0.00 0.00 4.17
155 156 2.886862 TGCACCCTTTTGAATGTGTG 57.113 45.000 0.00 0.00 0.00 3.82
156 157 3.197549 AGTTTGCACCCTTTTGAATGTGT 59.802 39.130 0.00 0.00 0.00 3.72
157 158 3.795877 AGTTTGCACCCTTTTGAATGTG 58.204 40.909 0.00 0.00 0.00 3.21
158 159 5.606348 TTAGTTTGCACCCTTTTGAATGT 57.394 34.783 0.00 0.00 0.00 2.71
159 160 6.073112 CCATTTAGTTTGCACCCTTTTGAATG 60.073 38.462 0.00 0.00 0.00 2.67
160 161 5.997129 CCATTTAGTTTGCACCCTTTTGAAT 59.003 36.000 0.00 0.00 0.00 2.57
161 162 5.363939 CCATTTAGTTTGCACCCTTTTGAA 58.636 37.500 0.00 0.00 0.00 2.69
162 163 4.742138 GCCATTTAGTTTGCACCCTTTTGA 60.742 41.667 0.00 0.00 0.00 2.69
163 164 3.498018 GCCATTTAGTTTGCACCCTTTTG 59.502 43.478 0.00 0.00 0.00 2.44
164 165 3.390967 AGCCATTTAGTTTGCACCCTTTT 59.609 39.130 0.00 0.00 0.00 2.27
165 166 2.972021 AGCCATTTAGTTTGCACCCTTT 59.028 40.909 0.00 0.00 0.00 3.11
166 167 2.608623 AGCCATTTAGTTTGCACCCTT 58.391 42.857 0.00 0.00 0.00 3.95
167 168 2.309136 AGCCATTTAGTTTGCACCCT 57.691 45.000 0.00 0.00 0.00 4.34
168 169 4.242475 GTTTAGCCATTTAGTTTGCACCC 58.758 43.478 0.00 0.00 0.00 4.61
169 170 4.877282 TGTTTAGCCATTTAGTTTGCACC 58.123 39.130 0.00 0.00 0.00 5.01
170 171 5.576774 GGATGTTTAGCCATTTAGTTTGCAC 59.423 40.000 0.00 0.00 30.94 4.57
171 172 5.337169 GGGATGTTTAGCCATTTAGTTTGCA 60.337 40.000 0.00 0.00 32.69 4.08
172 173 5.109210 GGGATGTTTAGCCATTTAGTTTGC 58.891 41.667 0.00 0.00 32.69 3.68
173 174 6.279513 TGGGATGTTTAGCCATTTAGTTTG 57.720 37.500 0.00 0.00 32.69 2.93
174 175 6.926630 TTGGGATGTTTAGCCATTTAGTTT 57.073 33.333 0.00 0.00 32.69 2.66
175 176 6.268847 TGTTTGGGATGTTTAGCCATTTAGTT 59.731 34.615 0.00 0.00 32.69 2.24
176 177 5.777732 TGTTTGGGATGTTTAGCCATTTAGT 59.222 36.000 0.00 0.00 32.69 2.24
177 178 6.279513 TGTTTGGGATGTTTAGCCATTTAG 57.720 37.500 0.00 0.00 32.69 1.85
178 179 6.672266 TTGTTTGGGATGTTTAGCCATTTA 57.328 33.333 0.00 0.00 32.69 1.40
179 180 5.559148 TTGTTTGGGATGTTTAGCCATTT 57.441 34.783 0.00 0.00 32.69 2.32
180 181 5.760484 ATTGTTTGGGATGTTTAGCCATT 57.240 34.783 0.00 0.00 32.69 3.16
181 182 5.248020 TGAATTGTTTGGGATGTTTAGCCAT 59.752 36.000 0.00 0.00 32.69 4.40
182 183 4.590647 TGAATTGTTTGGGATGTTTAGCCA 59.409 37.500 0.00 0.00 32.69 4.75
183 184 5.146010 TGAATTGTTTGGGATGTTTAGCC 57.854 39.130 0.00 0.00 0.00 3.93
184 185 8.947055 ATTATGAATTGTTTGGGATGTTTAGC 57.053 30.769 0.00 0.00 0.00 3.09
187 188 9.874205 CACTATTATGAATTGTTTGGGATGTTT 57.126 29.630 0.00 0.00 0.00 2.83
188 189 9.034800 ACACTATTATGAATTGTTTGGGATGTT 57.965 29.630 0.00 0.00 0.00 2.71
189 190 8.469200 CACACTATTATGAATTGTTTGGGATGT 58.531 33.333 0.00 0.00 0.00 3.06
190 191 8.685427 TCACACTATTATGAATTGTTTGGGATG 58.315 33.333 0.00 0.00 29.40 3.51
191 192 8.821686 TCACACTATTATGAATTGTTTGGGAT 57.178 30.769 0.00 0.00 29.40 3.85
192 193 8.821686 ATCACACTATTATGAATTGTTTGGGA 57.178 30.769 0.00 0.00 29.40 4.37
193 194 9.874205 AAATCACACTATTATGAATTGTTTGGG 57.126 29.630 0.00 0.00 29.40 4.12
196 197 9.369904 GCCAAATCACACTATTATGAATTGTTT 57.630 29.630 0.00 0.00 35.04 2.83
197 198 8.530311 TGCCAAATCACACTATTATGAATTGTT 58.470 29.630 0.00 0.00 35.04 2.83
198 199 8.065473 TGCCAAATCACACTATTATGAATTGT 57.935 30.769 0.00 0.00 35.04 2.71
201 202 8.517878 GCTATGCCAAATCACACTATTATGAAT 58.482 33.333 0.00 0.00 0.00 2.57
202 203 7.874940 GCTATGCCAAATCACACTATTATGAA 58.125 34.615 0.00 0.00 0.00 2.57
203 204 7.439157 GCTATGCCAAATCACACTATTATGA 57.561 36.000 0.00 0.00 0.00 2.15
221 222 0.103572 TTCGTCGTAAGGGGCTATGC 59.896 55.000 0.00 0.00 38.47 3.14
222 223 1.269621 CCTTCGTCGTAAGGGGCTATG 60.270 57.143 12.85 0.00 42.08 2.23
223 224 1.038280 CCTTCGTCGTAAGGGGCTAT 58.962 55.000 12.85 0.00 42.08 2.97
224 225 1.669999 GCCTTCGTCGTAAGGGGCTA 61.670 60.000 18.82 0.00 45.31 3.93
225 226 3.015312 GCCTTCGTCGTAAGGGGCT 62.015 63.158 18.82 0.00 45.31 5.19
226 227 2.510918 GCCTTCGTCGTAAGGGGC 60.511 66.667 18.82 11.16 45.31 5.80
227 228 1.968050 ATGGCCTTCGTCGTAAGGGG 61.968 60.000 18.82 6.51 45.31 4.79
228 229 0.810031 CATGGCCTTCGTCGTAAGGG 60.810 60.000 18.82 2.54 45.31 3.95
230 231 1.393539 CAACATGGCCTTCGTCGTAAG 59.606 52.381 3.32 0.00 0.00 2.34
231 232 1.434555 CAACATGGCCTTCGTCGTAA 58.565 50.000 3.32 0.00 0.00 3.18
232 233 1.017177 GCAACATGGCCTTCGTCGTA 61.017 55.000 3.32 0.00 0.00 3.43
233 234 2.325082 GCAACATGGCCTTCGTCGT 61.325 57.895 3.32 0.00 0.00 4.34
234 235 1.577328 AAGCAACATGGCCTTCGTCG 61.577 55.000 3.32 0.00 0.00 5.12
235 236 0.169009 GAAGCAACATGGCCTTCGTC 59.831 55.000 3.32 0.00 0.00 4.20
236 237 1.577328 CGAAGCAACATGGCCTTCGT 61.577 55.000 24.27 0.00 38.45 3.85
237 238 1.135315 CGAAGCAACATGGCCTTCG 59.865 57.895 21.57 21.57 37.73 3.79
249 250 6.957178 TTTTCTCAAAAACTGCGCGAAGCA 62.957 41.667 15.86 0.00 40.96 3.91
250 251 4.570165 TTTTCTCAAAAACTGCGCGAAGC 61.570 43.478 15.86 0.00 38.81 3.86
251 252 2.383298 TTCTCAAAAACTGCGCGAAG 57.617 45.000 14.05 14.05 0.00 3.79
252 253 2.834574 TTTCTCAAAAACTGCGCGAA 57.165 40.000 12.10 0.00 0.00 4.70
253 254 2.834574 TTTTCTCAAAAACTGCGCGA 57.165 40.000 12.10 0.00 29.44 5.87
254 255 2.405025 GGATTTTCTCAAAAACTGCGCG 59.595 45.455 0.00 0.00 37.20 6.86
255 256 3.380142 TGGATTTTCTCAAAAACTGCGC 58.620 40.909 0.00 0.00 37.20 6.09
256 257 5.107375 CCAATGGATTTTCTCAAAAACTGCG 60.107 40.000 0.00 0.00 37.20 5.18
257 258 5.179929 CCCAATGGATTTTCTCAAAAACTGC 59.820 40.000 0.00 0.00 37.20 4.40
258 259 5.702209 CCCCAATGGATTTTCTCAAAAACTG 59.298 40.000 0.00 0.00 37.20 3.16
259 260 5.221904 CCCCCAATGGATTTTCTCAAAAACT 60.222 40.000 0.00 0.00 37.20 2.66
260 261 5.003160 CCCCCAATGGATTTTCTCAAAAAC 58.997 41.667 0.00 0.00 37.20 2.43
261 262 4.910304 TCCCCCAATGGATTTTCTCAAAAA 59.090 37.500 0.00 0.00 38.66 1.94
262 263 4.497516 TCCCCCAATGGATTTTCTCAAAA 58.502 39.130 0.00 0.00 35.39 2.44
263 264 4.095946 CTCCCCCAATGGATTTTCTCAAA 58.904 43.478 0.00 0.00 35.39 2.69
264 265 3.077391 ACTCCCCCAATGGATTTTCTCAA 59.923 43.478 0.00 0.00 35.39 3.02
265 266 2.654385 ACTCCCCCAATGGATTTTCTCA 59.346 45.455 0.00 0.00 35.39 3.27
266 267 3.388552 ACTCCCCCAATGGATTTTCTC 57.611 47.619 0.00 0.00 35.39 2.87
267 268 4.119155 TCTACTCCCCCAATGGATTTTCT 58.881 43.478 0.00 0.00 35.39 2.52
268 269 4.519906 TCTACTCCCCCAATGGATTTTC 57.480 45.455 0.00 0.00 35.39 2.29
269 270 4.965283 TTCTACTCCCCCAATGGATTTT 57.035 40.909 0.00 0.00 35.39 1.82
270 271 4.965283 TTTCTACTCCCCCAATGGATTT 57.035 40.909 0.00 0.00 35.39 2.17
271 272 4.965283 TTTTCTACTCCCCCAATGGATT 57.035 40.909 0.00 0.00 35.39 3.01
272 273 4.610333 GTTTTTCTACTCCCCCAATGGAT 58.390 43.478 0.00 0.00 35.39 3.41
273 274 3.560453 CGTTTTTCTACTCCCCCAATGGA 60.560 47.826 0.00 0.00 35.39 3.41
274 275 2.752903 CGTTTTTCTACTCCCCCAATGG 59.247 50.000 0.00 0.00 0.00 3.16
275 276 2.163613 GCGTTTTTCTACTCCCCCAATG 59.836 50.000 0.00 0.00 0.00 2.82
276 277 2.041216 AGCGTTTTTCTACTCCCCCAAT 59.959 45.455 0.00 0.00 0.00 3.16
277 278 1.422402 AGCGTTTTTCTACTCCCCCAA 59.578 47.619 0.00 0.00 0.00 4.12
278 279 1.061546 AGCGTTTTTCTACTCCCCCA 58.938 50.000 0.00 0.00 0.00 4.96
279 280 1.450025 CAGCGTTTTTCTACTCCCCC 58.550 55.000 0.00 0.00 0.00 5.40
280 281 0.803117 GCAGCGTTTTTCTACTCCCC 59.197 55.000 0.00 0.00 0.00 4.81
281 282 0.442699 CGCAGCGTTTTTCTACTCCC 59.557 55.000 6.65 0.00 0.00 4.30
282 283 1.136336 CACGCAGCGTTTTTCTACTCC 60.136 52.381 20.29 0.00 38.32 3.85
283 284 1.136336 CCACGCAGCGTTTTTCTACTC 60.136 52.381 20.29 0.00 38.32 2.59
284 285 0.865769 CCACGCAGCGTTTTTCTACT 59.134 50.000 20.29 0.00 38.32 2.57
285 286 0.724785 GCCACGCAGCGTTTTTCTAC 60.725 55.000 20.29 0.00 38.32 2.59
286 287 1.572447 GCCACGCAGCGTTTTTCTA 59.428 52.632 20.29 0.00 38.32 2.10
287 288 2.331451 GCCACGCAGCGTTTTTCT 59.669 55.556 20.29 0.00 38.32 2.52
303 304 2.824489 GCTACAAAGGGGCCTCGC 60.824 66.667 0.84 0.00 0.00 5.03
304 305 2.124695 GGCTACAAAGGGGCCTCG 60.125 66.667 0.84 0.00 42.31 4.63
305 306 1.378646 GTGGCTACAAAGGGGCCTC 60.379 63.158 0.84 0.00 45.45 4.70
306 307 2.763902 GTGGCTACAAAGGGGCCT 59.236 61.111 0.84 0.00 45.45 5.19
307 308 2.362503 GGTGGCTACAAAGGGGCC 60.363 66.667 1.52 0.00 45.45 5.80
308 309 2.750237 CGGTGGCTACAAAGGGGC 60.750 66.667 1.52 0.00 0.00 5.80
309 310 1.674322 CACGGTGGCTACAAAGGGG 60.674 63.158 1.52 0.00 0.00 4.79
310 311 2.332654 GCACGGTGGCTACAAAGGG 61.333 63.158 10.60 0.00 0.00 3.95
311 312 2.332654 GGCACGGTGGCTACAAAGG 61.333 63.158 25.48 0.00 40.14 3.11
312 313 1.599518 TGGCACGGTGGCTACAAAG 60.600 57.895 30.89 0.00 44.10 2.77
313 314 1.894756 GTGGCACGGTGGCTACAAA 60.895 57.895 30.89 11.48 43.82 2.83
314 315 2.281208 GTGGCACGGTGGCTACAA 60.281 61.111 30.89 11.84 43.82 2.41
315 316 4.673298 CGTGGCACGGTGGCTACA 62.673 66.667 31.19 12.20 44.50 2.74
328 329 3.578515 AAACCCGTACCTCGCGTGG 62.579 63.158 24.76 24.76 38.35 4.94
329 330 2.048877 AAACCCGTACCTCGCGTG 60.049 61.111 5.77 2.75 38.35 5.34
330 331 2.048877 CAAACCCGTACCTCGCGT 60.049 61.111 5.77 0.00 38.35 6.01
331 332 1.620413 GAACAAACCCGTACCTCGCG 61.620 60.000 0.00 0.00 38.35 5.87
332 333 1.293963 GGAACAAACCCGTACCTCGC 61.294 60.000 0.00 0.00 38.35 5.03
333 334 0.033781 TGGAACAAACCCGTACCTCG 59.966 55.000 0.00 0.00 35.30 4.63
334 335 1.516161 GTGGAACAAACCCGTACCTC 58.484 55.000 0.00 0.00 44.16 3.85
335 336 0.109153 GGTGGAACAAACCCGTACCT 59.891 55.000 0.00 0.00 44.16 3.08
336 337 0.179023 TGGTGGAACAAACCCGTACC 60.179 55.000 0.00 0.00 44.16 3.34
337 338 0.946528 GTGGTGGAACAAACCCGTAC 59.053 55.000 0.00 0.00 44.16 3.67
338 339 0.838608 AGTGGTGGAACAAACCCGTA 59.161 50.000 0.00 0.00 44.16 4.02
339 340 0.750182 CAGTGGTGGAACAAACCCGT 60.750 55.000 0.00 0.00 44.16 5.28
340 341 2.029743 CAGTGGTGGAACAAACCCG 58.970 57.895 0.00 0.00 44.16 5.28
350 351 0.610687 GAGAGGAGTTCCAGTGGTGG 59.389 60.000 9.54 0.00 46.63 4.61
351 352 1.548269 GAGAGAGGAGTTCCAGTGGTG 59.452 57.143 9.54 0.00 38.89 4.17
352 353 1.148027 TGAGAGAGGAGTTCCAGTGGT 59.852 52.381 9.54 0.00 38.89 4.16
353 354 1.824230 CTGAGAGAGGAGTTCCAGTGG 59.176 57.143 1.40 1.40 38.89 4.00
354 355 1.824230 CCTGAGAGAGGAGTTCCAGTG 59.176 57.143 0.28 0.00 46.33 3.66
355 356 1.713647 TCCTGAGAGAGGAGTTCCAGT 59.286 52.381 0.28 0.00 46.96 4.00
356 357 2.523325 TCCTGAGAGAGGAGTTCCAG 57.477 55.000 0.28 0.00 46.96 3.86
364 365 0.466555 CCTACCCGTCCTGAGAGAGG 60.467 65.000 0.00 0.00 44.45 3.69
365 366 0.547075 TCCTACCCGTCCTGAGAGAG 59.453 60.000 0.00 0.00 0.00 3.20
366 367 0.997363 TTCCTACCCGTCCTGAGAGA 59.003 55.000 0.00 0.00 0.00 3.10
367 368 2.074729 ATTCCTACCCGTCCTGAGAG 57.925 55.000 0.00 0.00 0.00 3.20
368 369 2.423947 GGTATTCCTACCCGTCCTGAGA 60.424 54.545 0.00 0.00 41.50 3.27
369 370 1.962100 GGTATTCCTACCCGTCCTGAG 59.038 57.143 0.00 0.00 41.50 3.35
370 371 1.288633 TGGTATTCCTACCCGTCCTGA 59.711 52.381 0.00 0.00 46.01 3.86
371 372 1.784358 TGGTATTCCTACCCGTCCTG 58.216 55.000 0.00 0.00 46.01 3.86
372 373 2.090943 TCATGGTATTCCTACCCGTCCT 60.091 50.000 0.00 0.00 46.01 3.85
373 374 2.322658 TCATGGTATTCCTACCCGTCC 58.677 52.381 0.00 0.00 46.01 4.79
374 375 4.411256 TTTCATGGTATTCCTACCCGTC 57.589 45.455 0.00 0.00 46.01 4.79
375 376 4.847990 TTTTCATGGTATTCCTACCCGT 57.152 40.909 0.00 0.00 46.01 5.28
376 377 6.709018 AATTTTTCATGGTATTCCTACCCG 57.291 37.500 0.00 0.00 46.01 5.28
464 465 8.745590 GCCTAGACCCAATAAAAATGTTCTTAA 58.254 33.333 0.00 0.00 0.00 1.85
465 466 8.113462 AGCCTAGACCCAATAAAAATGTTCTTA 58.887 33.333 0.00 0.00 0.00 2.10
466 467 6.954102 AGCCTAGACCCAATAAAAATGTTCTT 59.046 34.615 0.00 0.00 0.00 2.52
467 468 6.494059 AGCCTAGACCCAATAAAAATGTTCT 58.506 36.000 0.00 0.00 0.00 3.01
468 469 6.775594 AGCCTAGACCCAATAAAAATGTTC 57.224 37.500 0.00 0.00 0.00 3.18
469 470 8.695456 CATTAGCCTAGACCCAATAAAAATGTT 58.305 33.333 0.00 0.00 0.00 2.71
470 471 7.839200 ACATTAGCCTAGACCCAATAAAAATGT 59.161 33.333 0.00 0.00 0.00 2.71
471 472 8.237811 ACATTAGCCTAGACCCAATAAAAATG 57.762 34.615 0.00 0.00 0.00 2.32
472 473 8.282256 AGACATTAGCCTAGACCCAATAAAAAT 58.718 33.333 0.00 0.00 0.00 1.82
473 474 7.639378 AGACATTAGCCTAGACCCAATAAAAA 58.361 34.615 0.00 0.00 0.00 1.94
474 475 7.208064 AGACATTAGCCTAGACCCAATAAAA 57.792 36.000 0.00 0.00 0.00 1.52
475 476 6.824958 AGACATTAGCCTAGACCCAATAAA 57.175 37.500 0.00 0.00 0.00 1.40
476 477 6.824958 AAGACATTAGCCTAGACCCAATAA 57.175 37.500 0.00 0.00 0.00 1.40
477 478 6.824958 AAAGACATTAGCCTAGACCCAATA 57.175 37.500 0.00 0.00 0.00 1.90
478 479 5.717119 AAAGACATTAGCCTAGACCCAAT 57.283 39.130 0.00 0.00 0.00 3.16
479 480 5.514500 AAAAGACATTAGCCTAGACCCAA 57.486 39.130 0.00 0.00 0.00 4.12
480 481 5.514500 AAAAAGACATTAGCCTAGACCCA 57.486 39.130 0.00 0.00 0.00 4.51
515 516 9.543018 CGAGTAGGATAGAAACAAAATTTTCAC 57.457 33.333 0.00 0.00 37.86 3.18
516 517 8.234546 GCGAGTAGGATAGAAACAAAATTTTCA 58.765 33.333 0.00 0.00 37.86 2.69
517 518 8.451748 AGCGAGTAGGATAGAAACAAAATTTTC 58.548 33.333 0.00 0.00 35.97 2.29
518 519 8.336801 AGCGAGTAGGATAGAAACAAAATTTT 57.663 30.769 0.00 0.00 0.00 1.82
519 520 7.923414 AGCGAGTAGGATAGAAACAAAATTT 57.077 32.000 0.00 0.00 0.00 1.82
520 521 7.201530 CGAAGCGAGTAGGATAGAAACAAAATT 60.202 37.037 0.00 0.00 0.00 1.82
521 522 6.255887 CGAAGCGAGTAGGATAGAAACAAAAT 59.744 38.462 0.00 0.00 0.00 1.82
522 523 5.575606 CGAAGCGAGTAGGATAGAAACAAAA 59.424 40.000 0.00 0.00 0.00 2.44
523 524 5.100259 CGAAGCGAGTAGGATAGAAACAAA 58.900 41.667 0.00 0.00 0.00 2.83
524 525 4.157289 ACGAAGCGAGTAGGATAGAAACAA 59.843 41.667 0.00 0.00 0.00 2.83
525 526 3.693085 ACGAAGCGAGTAGGATAGAAACA 59.307 43.478 0.00 0.00 0.00 2.83
526 527 4.281264 GACGAAGCGAGTAGGATAGAAAC 58.719 47.826 0.00 0.00 0.00 2.78
527 528 3.314635 GGACGAAGCGAGTAGGATAGAAA 59.685 47.826 0.00 0.00 0.00 2.52
528 529 2.877168 GGACGAAGCGAGTAGGATAGAA 59.123 50.000 0.00 0.00 0.00 2.10
529 530 2.492012 GGACGAAGCGAGTAGGATAGA 58.508 52.381 0.00 0.00 0.00 1.98
530 531 1.194997 CGGACGAAGCGAGTAGGATAG 59.805 57.143 0.00 0.00 0.00 2.08
531 532 1.202568 TCGGACGAAGCGAGTAGGATA 60.203 52.381 0.00 0.00 0.00 2.59
532 533 0.463295 TCGGACGAAGCGAGTAGGAT 60.463 55.000 0.00 0.00 0.00 3.24
533 534 0.674581 TTCGGACGAAGCGAGTAGGA 60.675 55.000 2.62 0.00 0.00 2.94
534 535 0.169672 TTTCGGACGAAGCGAGTAGG 59.830 55.000 7.25 0.00 35.38 3.18
535 536 1.846782 CATTTCGGACGAAGCGAGTAG 59.153 52.381 7.25 0.00 35.38 2.57
536 537 1.200716 ACATTTCGGACGAAGCGAGTA 59.799 47.619 7.25 0.00 35.38 2.59
537 538 0.038526 ACATTTCGGACGAAGCGAGT 60.039 50.000 7.25 3.01 35.38 4.18
538 539 1.904144 TACATTTCGGACGAAGCGAG 58.096 50.000 7.25 2.46 35.38 5.03
539 540 2.095110 TCTTACATTTCGGACGAAGCGA 60.095 45.455 7.25 0.00 35.38 4.93
540 541 2.027688 GTCTTACATTTCGGACGAAGCG 59.972 50.000 7.25 5.61 35.38 4.68
541 542 2.347755 GGTCTTACATTTCGGACGAAGC 59.652 50.000 7.25 0.00 35.38 3.86
542 543 3.581755 TGGTCTTACATTTCGGACGAAG 58.418 45.455 7.25 0.12 35.38 3.79
543 544 3.663995 TGGTCTTACATTTCGGACGAA 57.336 42.857 2.62 2.62 0.00 3.85
544 545 3.880047 ATGGTCTTACATTTCGGACGA 57.120 42.857 0.00 0.00 0.00 4.20
545 546 6.598753 AAATATGGTCTTACATTTCGGACG 57.401 37.500 0.00 0.00 32.39 4.79
546 547 9.712359 GTAAAAATATGGTCTTACATTTCGGAC 57.288 33.333 0.00 0.00 32.39 4.79
547 548 9.451002 TGTAAAAATATGGTCTTACATTTCGGA 57.549 29.630 0.00 0.00 31.14 4.55
548 549 9.498307 GTGTAAAAATATGGTCTTACATTTCGG 57.502 33.333 0.00 0.00 36.82 4.30
604 605 9.692325 ATTCTCTGAAAGCTCTTTGGTTTATAT 57.308 29.630 0.00 0.00 45.15 0.86
606 607 9.692325 ATATTCTCTGAAAGCTCTTTGGTTTAT 57.308 29.630 0.00 0.00 45.15 1.40
609 610 9.692325 AATATATTCTCTGAAAGCTCTTTGGTT 57.308 29.630 0.00 0.00 38.10 3.67
610 611 9.692325 AAATATATTCTCTGAAAGCTCTTTGGT 57.308 29.630 0.00 0.00 32.11 3.67
671 672 8.270744 AGCATCTGTTGGTCTATAGATCTTTTT 58.729 33.333 14.10 0.00 0.00 1.94
672 673 7.714377 CAGCATCTGTTGGTCTATAGATCTTTT 59.286 37.037 14.10 0.00 32.51 2.27
673 674 7.070447 TCAGCATCTGTTGGTCTATAGATCTTT 59.930 37.037 14.10 0.00 32.51 2.52
674 675 6.552725 TCAGCATCTGTTGGTCTATAGATCTT 59.447 38.462 14.10 0.00 32.51 2.40
675 676 6.073981 TCAGCATCTGTTGGTCTATAGATCT 58.926 40.000 14.10 0.00 32.51 2.75
676 677 6.338214 TCAGCATCTGTTGGTCTATAGATC 57.662 41.667 5.57 5.80 32.51 2.75
677 678 6.737720 TTCAGCATCTGTTGGTCTATAGAT 57.262 37.500 5.57 0.00 32.51 1.98
678 679 5.452496 GCTTCAGCATCTGTTGGTCTATAGA 60.452 44.000 0.00 0.00 41.59 1.98
679 680 4.749099 GCTTCAGCATCTGTTGGTCTATAG 59.251 45.833 0.00 0.00 41.59 1.31
680 681 4.697514 GCTTCAGCATCTGTTGGTCTATA 58.302 43.478 0.00 0.00 41.59 1.31
681 682 3.539604 GCTTCAGCATCTGTTGGTCTAT 58.460 45.455 0.00 0.00 41.59 1.98
682 683 2.675032 CGCTTCAGCATCTGTTGGTCTA 60.675 50.000 0.00 0.00 42.21 2.59
683 684 1.818642 GCTTCAGCATCTGTTGGTCT 58.181 50.000 0.00 0.00 41.59 3.85
684 685 0.445436 CGCTTCAGCATCTGTTGGTC 59.555 55.000 0.00 0.00 42.21 4.02
685 686 0.250467 ACGCTTCAGCATCTGTTGGT 60.250 50.000 0.00 0.00 42.21 3.67
686 687 0.445436 GACGCTTCAGCATCTGTTGG 59.555 55.000 0.00 0.00 42.21 3.77
687 688 1.150827 TGACGCTTCAGCATCTGTTG 58.849 50.000 0.00 0.00 42.21 3.33
688 689 1.802960 CTTGACGCTTCAGCATCTGTT 59.197 47.619 0.00 0.00 42.21 3.16
689 690 1.436600 CTTGACGCTTCAGCATCTGT 58.563 50.000 0.00 0.00 42.21 3.41
690 691 0.096628 GCTTGACGCTTCAGCATCTG 59.903 55.000 8.90 0.00 42.21 2.90
691 692 1.023513 GGCTTGACGCTTCAGCATCT 61.024 55.000 13.67 0.00 42.21 2.90
692 693 1.023513 AGGCTTGACGCTTCAGCATC 61.024 55.000 13.67 0.00 42.21 3.91
693 694 1.002868 AGGCTTGACGCTTCAGCAT 60.003 52.632 13.67 6.51 42.21 3.79
694 695 1.962822 CAGGCTTGACGCTTCAGCA 60.963 57.895 13.67 0.00 42.21 4.41
695 696 2.866028 CAGGCTTGACGCTTCAGC 59.134 61.111 0.00 6.22 39.13 4.26
696 697 1.909141 CTGCAGGCTTGACGCTTCAG 61.909 60.000 5.57 0.00 39.13 3.02
697 698 1.962822 CTGCAGGCTTGACGCTTCA 60.963 57.895 5.57 0.00 39.13 3.02
698 699 1.669115 TCTGCAGGCTTGACGCTTC 60.669 57.895 15.13 0.00 39.13 3.86
699 700 1.963338 GTCTGCAGGCTTGACGCTT 60.963 57.895 12.09 0.00 39.13 4.68
700 701 2.358003 GTCTGCAGGCTTGACGCT 60.358 61.111 12.09 0.00 39.13 5.07
701 702 2.666190 TGTCTGCAGGCTTGACGC 60.666 61.111 20.86 0.00 33.81 5.19
702 703 3.559024 CTGTCTGCAGGCTTGACG 58.441 61.111 20.86 0.00 39.01 4.35
727 728 4.385358 TTCTTTTCCTGTTGCTGTTTCC 57.615 40.909 0.00 0.00 0.00 3.13
738 739 1.001293 GCCAGGGCTTTTCTTTTCCTG 59.999 52.381 2.30 0.00 43.26 3.86
740 741 0.038251 CGCCAGGGCTTTTCTTTTCC 60.038 55.000 8.91 0.00 39.32 3.13
744 745 0.673985 GTTTCGCCAGGGCTTTTCTT 59.326 50.000 8.91 0.00 39.32 2.52
753 754 2.676121 TGCCCATGTTTCGCCAGG 60.676 61.111 0.00 0.00 0.00 4.45
817 826 2.098280 TGAACCATCACCAACAACAACG 59.902 45.455 0.00 0.00 0.00 4.10
818 827 3.705604 CTGAACCATCACCAACAACAAC 58.294 45.455 0.00 0.00 0.00 3.32
819 828 2.100584 GCTGAACCATCACCAACAACAA 59.899 45.455 0.00 0.00 0.00 2.83
820 829 1.680735 GCTGAACCATCACCAACAACA 59.319 47.619 0.00 0.00 0.00 3.33
840 849 1.064296 CCGTACTCGCTGTAGCCTG 59.936 63.158 0.00 0.00 37.91 4.85
841 850 1.077930 TCCGTACTCGCTGTAGCCT 60.078 57.895 0.00 0.00 37.91 4.58
842 851 1.063811 GTCCGTACTCGCTGTAGCC 59.936 63.158 0.00 0.00 37.91 3.93
844 853 0.247576 CGTGTCCGTACTCGCTGTAG 60.248 60.000 0.00 0.00 36.02 2.74
897 906 1.209127 GGTGTGGTGTGTAATGCGC 59.791 57.895 0.00 0.00 0.00 6.09
931 940 2.425668 GGAGAAAGAGAGAAGGACGAGG 59.574 54.545 0.00 0.00 0.00 4.63
932 941 3.352648 AGGAGAAAGAGAGAAGGACGAG 58.647 50.000 0.00 0.00 0.00 4.18
933 942 3.443145 AGGAGAAAGAGAGAAGGACGA 57.557 47.619 0.00 0.00 0.00 4.20
934 943 4.219725 AGAAAGGAGAAAGAGAGAAGGACG 59.780 45.833 0.00 0.00 0.00 4.79
935 944 5.480422 AGAGAAAGGAGAAAGAGAGAAGGAC 59.520 44.000 0.00 0.00 0.00 3.85
938 947 6.660949 AGAGAGAGAAAGGAGAAAGAGAGAAG 59.339 42.308 0.00 0.00 0.00 2.85
939 948 6.552008 AGAGAGAGAAAGGAGAAAGAGAGAA 58.448 40.000 0.00 0.00 0.00 2.87
942 951 6.012508 AGAGAGAGAGAGAAAGGAGAAAGAGA 60.013 42.308 0.00 0.00 0.00 3.10
948 961 5.032846 AGAGAGAGAGAGAGAGAAAGGAGA 58.967 45.833 0.00 0.00 0.00 3.71
951 964 5.130145 AGAGAGAGAGAGAGAGAGAGAAAGG 59.870 48.000 0.00 0.00 0.00 3.11
954 972 4.339530 CGAGAGAGAGAGAGAGAGAGAGAA 59.660 50.000 0.00 0.00 0.00 2.87
1111 1141 5.659048 ACAAACACATCGAAGAAGAAGAC 57.341 39.130 0.00 0.00 43.58 3.01
1123 1153 5.009010 AGTTCCATCAGTGAACAAACACATC 59.991 40.000 13.89 0.00 43.57 3.06
1124 1154 4.889409 AGTTCCATCAGTGAACAAACACAT 59.111 37.500 13.89 0.00 43.57 3.21
1125 1155 4.096231 CAGTTCCATCAGTGAACAAACACA 59.904 41.667 13.89 0.00 43.57 3.72
1127 1157 3.631686 CCAGTTCCATCAGTGAACAAACA 59.368 43.478 13.89 0.00 43.57 2.83
1128 1158 3.550842 GCCAGTTCCATCAGTGAACAAAC 60.551 47.826 0.00 1.95 43.57 2.93
1130 1160 2.229792 GCCAGTTCCATCAGTGAACAA 58.770 47.619 0.00 0.00 43.57 2.83
1149 1179 2.612212 CACCATGGTGTTATTAGTCGGC 59.388 50.000 32.94 0.00 40.91 5.54
1178 1208 1.376086 CACCTCCACATGCTGTCCA 59.624 57.895 0.00 0.00 0.00 4.02
1179 1209 2.042831 GCACCTCCACATGCTGTCC 61.043 63.158 0.00 0.00 38.84 4.02
1383 1438 4.593956 GACTTTCATCTCTGTTTGGGGAT 58.406 43.478 0.00 0.00 0.00 3.85
1386 1441 2.160417 GCGACTTTCATCTCTGTTTGGG 59.840 50.000 0.00 0.00 0.00 4.12
1392 1448 2.662006 TCCTGCGACTTTCATCTCTG 57.338 50.000 0.00 0.00 0.00 3.35
1403 1459 1.658673 CCGGTAGGTATCCTGCGAC 59.341 63.158 0.00 0.00 37.11 5.19
1409 1465 1.070289 CCTTCAAGCCGGTAGGTATCC 59.930 57.143 1.90 0.00 40.50 2.59
1416 1472 0.618458 AATCAGCCTTCAAGCCGGTA 59.382 50.000 1.90 0.00 0.00 4.02
1417 1473 0.618458 TAATCAGCCTTCAAGCCGGT 59.382 50.000 1.90 0.00 0.00 5.28
1427 1483 0.546598 CGAGGGGGTTTAATCAGCCT 59.453 55.000 0.00 0.00 34.46 4.58
1428 1484 0.544697 TCGAGGGGGTTTAATCAGCC 59.455 55.000 0.00 0.00 0.00 4.85
1435 1491 3.181463 CCAAACGATATCGAGGGGGTTTA 60.181 47.826 30.75 0.00 43.02 2.01
1439 1495 0.602905 GCCAAACGATATCGAGGGGG 60.603 60.000 30.75 23.43 43.02 5.40
1441 1497 2.296471 ACTAGCCAAACGATATCGAGGG 59.704 50.000 30.75 25.29 43.02 4.30
1452 1508 4.452455 CGGGATCATAATCACTAGCCAAAC 59.548 45.833 0.00 0.00 32.73 2.93
1476 1532 2.335681 TGATAGTTGTGACAGGGGGA 57.664 50.000 0.00 0.00 0.00 4.81
1481 1537 3.309138 GCAGAGCATGATAGTTGTGACAG 59.691 47.826 0.00 0.00 0.00 3.51
1482 1538 3.055602 AGCAGAGCATGATAGTTGTGACA 60.056 43.478 0.00 0.00 0.00 3.58
1493 1552 2.460669 TCAGTAGGAAGCAGAGCATGA 58.539 47.619 0.00 0.00 0.00 3.07
1516 1575 8.122472 AGTTCACTCCTCAAGAAAAAGAAAAA 57.878 30.769 0.00 0.00 0.00 1.94
1517 1576 7.703058 AGTTCACTCCTCAAGAAAAAGAAAA 57.297 32.000 0.00 0.00 0.00 2.29
1518 1577 7.703058 AAGTTCACTCCTCAAGAAAAAGAAA 57.297 32.000 0.00 0.00 0.00 2.52
1519 1578 7.703058 AAAGTTCACTCCTCAAGAAAAAGAA 57.297 32.000 0.00 0.00 0.00 2.52
1520 1579 7.703058 AAAAGTTCACTCCTCAAGAAAAAGA 57.297 32.000 0.00 0.00 0.00 2.52
1547 1606 4.629200 CAGCAGAGAACTAACAGTGGAATC 59.371 45.833 0.00 0.00 0.00 2.52
1559 1618 2.566279 TCTGATTCAGCAGCAGAGAACT 59.434 45.455 8.89 0.00 34.02 3.01
1620 1679 6.235231 AGTTTTATCTAGAATCGGGAGCAA 57.765 37.500 0.00 0.00 0.00 3.91
1623 1682 8.630917 TCAAGTAGTTTTATCTAGAATCGGGAG 58.369 37.037 0.00 0.00 0.00 4.30
1625 1684 9.032420 GTTCAAGTAGTTTTATCTAGAATCGGG 57.968 37.037 0.00 0.00 0.00 5.14
1627 1686 9.286946 ACGTTCAAGTAGTTTTATCTAGAATCG 57.713 33.333 0.00 0.00 0.00 3.34
1637 1696 8.810427 CAAACTGTCTACGTTCAAGTAGTTTTA 58.190 33.333 13.88 0.00 43.31 1.52
1639 1698 7.037438 TCAAACTGTCTACGTTCAAGTAGTTT 58.963 34.615 0.00 4.96 43.31 2.66
1643 1702 6.381481 TCTCAAACTGTCTACGTTCAAGTA 57.619 37.500 0.00 0.00 0.00 2.24
1652 1711 6.710744 TCATTTTCCCTTCTCAAACTGTCTAC 59.289 38.462 0.00 0.00 0.00 2.59
1667 1726 4.219288 GTCTGCATTCAAGTCATTTTCCCT 59.781 41.667 0.00 0.00 0.00 4.20
1699 1759 2.224161 GGGTCCATCAGTCTGTATCAGC 60.224 54.545 0.00 0.00 0.00 4.26
1700 1760 3.303938 AGGGTCCATCAGTCTGTATCAG 58.696 50.000 0.00 0.00 0.00 2.90
1701 1761 3.404869 AGGGTCCATCAGTCTGTATCA 57.595 47.619 0.00 0.00 0.00 2.15
1702 1762 4.762289 AAAGGGTCCATCAGTCTGTATC 57.238 45.455 0.00 0.00 0.00 2.24
1703 1763 5.487488 TGTAAAAGGGTCCATCAGTCTGTAT 59.513 40.000 0.00 0.00 0.00 2.29
1704 1764 4.841813 TGTAAAAGGGTCCATCAGTCTGTA 59.158 41.667 0.00 0.00 0.00 2.74
1705 1765 3.650942 TGTAAAAGGGTCCATCAGTCTGT 59.349 43.478 0.00 0.00 0.00 3.41
1706 1766 4.286297 TGTAAAAGGGTCCATCAGTCTG 57.714 45.455 0.00 0.00 0.00 3.51
1707 1767 4.324563 CCATGTAAAAGGGTCCATCAGTCT 60.325 45.833 0.00 0.00 0.00 3.24
1708 1768 3.947834 CCATGTAAAAGGGTCCATCAGTC 59.052 47.826 0.00 0.00 0.00 3.51
1736 1796 6.262944 TCCAGTATACATGTGGAATTTGATGC 59.737 38.462 9.11 0.00 37.43 3.91
1738 1798 7.040201 GCATCCAGTATACATGTGGAATTTGAT 60.040 37.037 14.39 0.00 43.59 2.57
1739 1799 6.262944 GCATCCAGTATACATGTGGAATTTGA 59.737 38.462 14.39 0.00 43.59 2.69
1740 1800 6.263842 AGCATCCAGTATACATGTGGAATTTG 59.736 38.462 14.39 10.39 43.59 2.32
1743 1803 5.072193 TGAGCATCCAGTATACATGTGGAAT 59.928 40.000 14.39 5.97 43.59 3.01
1744 1804 4.408596 TGAGCATCCAGTATACATGTGGAA 59.591 41.667 14.39 0.00 43.59 3.53
1745 1805 3.966665 TGAGCATCCAGTATACATGTGGA 59.033 43.478 9.11 13.15 44.48 4.02
1746 1806 4.341366 TGAGCATCCAGTATACATGTGG 57.659 45.455 9.11 4.49 0.00 4.17
1747 1807 5.334646 GCATTGAGCATCCAGTATACATGTG 60.335 44.000 9.11 0.00 44.79 3.21
1748 1808 4.758674 GCATTGAGCATCCAGTATACATGT 59.241 41.667 2.69 2.69 44.79 3.21
1749 1809 5.292671 GCATTGAGCATCCAGTATACATG 57.707 43.478 5.50 1.60 44.79 3.21
1778 1838 1.838112 TCGCCATGGCAAGAATTCTT 58.162 45.000 34.93 15.11 42.06 2.52
1779 1839 1.838112 TTCGCCATGGCAAGAATTCT 58.162 45.000 34.93 0.88 42.06 2.40
1780 1840 2.262211 GTTTCGCCATGGCAAGAATTC 58.738 47.619 34.93 20.65 42.06 2.17
1781 1841 1.617850 TGTTTCGCCATGGCAAGAATT 59.382 42.857 34.93 0.00 42.06 2.17
1782 1842 1.255882 TGTTTCGCCATGGCAAGAAT 58.744 45.000 34.93 0.00 42.06 2.40
1783 1843 1.067706 CATGTTTCGCCATGGCAAGAA 60.068 47.619 34.93 26.67 42.06 2.52
1784 1844 0.527113 CATGTTTCGCCATGGCAAGA 59.473 50.000 34.93 22.58 42.06 3.02
1785 1845 1.079875 GCATGTTTCGCCATGGCAAG 61.080 55.000 34.93 20.57 42.01 4.01
1786 1846 1.079956 GCATGTTTCGCCATGGCAA 60.080 52.632 34.93 24.14 42.01 4.52
1787 1847 2.215465 CTGCATGTTTCGCCATGGCA 62.215 55.000 34.93 19.88 42.01 4.92
1788 1848 1.517694 CTGCATGTTTCGCCATGGC 60.518 57.895 27.67 27.67 42.01 4.40
1789 1849 0.457166 CACTGCATGTTTCGCCATGG 60.457 55.000 7.63 7.63 42.01 3.66
1790 1850 0.457166 CCACTGCATGTTTCGCCATG 60.457 55.000 0.00 5.50 44.07 3.66
1791 1851 1.597797 CCCACTGCATGTTTCGCCAT 61.598 55.000 0.00 0.00 0.00 4.40
1792 1852 2.267351 CCCACTGCATGTTTCGCCA 61.267 57.895 0.00 0.00 0.00 5.69
1793 1853 2.568090 CCCACTGCATGTTTCGCC 59.432 61.111 0.00 0.00 0.00 5.54
1794 1854 2.126346 GCCCACTGCATGTTTCGC 60.126 61.111 0.00 0.00 40.77 4.70
1795 1855 1.647545 ATCGCCCACTGCATGTTTCG 61.648 55.000 0.00 0.00 41.33 3.46
1796 1856 0.099436 GATCGCCCACTGCATGTTTC 59.901 55.000 0.00 0.00 41.33 2.78
1797 1857 0.322816 AGATCGCCCACTGCATGTTT 60.323 50.000 0.00 0.00 41.33 2.83
1798 1858 1.028330 CAGATCGCCCACTGCATGTT 61.028 55.000 0.00 0.00 41.33 2.71
1799 1859 1.450848 CAGATCGCCCACTGCATGT 60.451 57.895 0.00 0.00 41.33 3.21
1800 1860 2.184830 CCAGATCGCCCACTGCATG 61.185 63.158 0.00 0.00 41.33 4.06
1975 2037 0.787183 GAGCGTGTCAGAAGCAGAAC 59.213 55.000 0.00 0.00 0.00 3.01
2182 2244 4.324991 GTTCTTCGGGCCGGTGGT 62.325 66.667 27.98 0.00 0.00 4.16
2569 2634 2.801631 GCCACTCCATCTCCTCCCG 61.802 68.421 0.00 0.00 0.00 5.14
2601 2666 1.690633 CCTGAGCTTCCCCTGCCTA 60.691 63.158 0.00 0.00 0.00 3.93
2744 2810 5.774498 TTGCCACATAACACAAACACATA 57.226 34.783 0.00 0.00 0.00 2.29
2758 2824 9.729281 AATTCTTAATTTCTCAAATTGCCACAT 57.271 25.926 4.76 0.00 41.01 3.21
2848 2916 6.749118 GCTCTAATGCTGAACATAAGGTTTTG 59.251 38.462 0.00 0.00 40.63 2.44
2862 2932 2.634815 ATGGAGGTGCTCTAATGCTG 57.365 50.000 0.00 0.00 0.00 4.41
2865 2935 2.369860 TGCCTATGGAGGTGCTCTAATG 59.630 50.000 0.00 0.00 45.78 1.90
2932 3016 6.372104 TGGAGATGACCCATATTTATGCAAA 58.628 36.000 0.00 0.00 32.40 3.68
2942 3027 2.171237 CAGCTGTTGGAGATGACCCATA 59.829 50.000 5.25 0.00 40.87 2.74
2950 3035 0.111061 TTGTGGCAGCTGTTGGAGAT 59.889 50.000 16.64 0.00 0.00 2.75
2966 3051 2.281692 TGCAGATGCCGCTGTTGT 60.282 55.556 1.72 0.00 41.18 3.32
2967 3052 1.859427 AAGTGCAGATGCCGCTGTTG 61.859 55.000 1.72 0.00 41.18 3.33
2968 3053 1.174712 AAAGTGCAGATGCCGCTGTT 61.175 50.000 1.72 0.00 41.18 3.16
3068 3174 8.370493 AGTAATTTGATCGTGTGGATTGATAG 57.630 34.615 0.00 0.00 34.82 2.08
3092 3198 9.173021 TGTGGGTTTGAATGATAAACTATGTAG 57.827 33.333 0.00 0.00 37.96 2.74
3095 3201 8.303156 TGTTGTGGGTTTGAATGATAAACTATG 58.697 33.333 0.00 0.00 37.96 2.23
3099 3205 7.151308 TGATGTTGTGGGTTTGAATGATAAAC 58.849 34.615 0.00 0.00 37.31 2.01
3101 3207 6.907853 TGATGTTGTGGGTTTGAATGATAA 57.092 33.333 0.00 0.00 0.00 1.75
3102 3208 6.907853 TTGATGTTGTGGGTTTGAATGATA 57.092 33.333 0.00 0.00 0.00 2.15
3103 3209 5.804944 TTGATGTTGTGGGTTTGAATGAT 57.195 34.783 0.00 0.00 0.00 2.45
3106 3212 4.756135 GCATTTGATGTTGTGGGTTTGAAT 59.244 37.500 0.00 0.00 0.00 2.57
3107 3213 4.125703 GCATTTGATGTTGTGGGTTTGAA 58.874 39.130 0.00 0.00 0.00 2.69
3113 3289 2.801679 GTGTTGCATTTGATGTTGTGGG 59.198 45.455 0.00 0.00 0.00 4.61
3151 3327 9.463443 GTGTGCTGAAAAAGACTTTGTTATTAT 57.537 29.630 0.06 0.00 0.00 1.28
3152 3328 8.462811 TGTGTGCTGAAAAAGACTTTGTTATTA 58.537 29.630 0.06 0.00 0.00 0.98
3155 3331 6.260870 TGTGTGCTGAAAAAGACTTTGTTA 57.739 33.333 0.06 0.00 0.00 2.41
3164 3340 6.884096 TTGTTGTATTGTGTGCTGAAAAAG 57.116 33.333 0.00 0.00 0.00 2.27
3170 3346 5.339177 TGAACTTTGTTGTATTGTGTGCTG 58.661 37.500 0.00 0.00 0.00 4.41
3224 3400 8.766476 CATGATATGGGAATTATCAGTCCTAGT 58.234 37.037 0.00 0.00 38.94 2.57
3233 3409 6.375455 GTGGTGGACATGATATGGGAATTATC 59.625 42.308 0.00 0.00 33.60 1.75
3234 3410 6.045931 AGTGGTGGACATGATATGGGAATTAT 59.954 38.462 0.00 0.00 33.60 1.28
3289 3465 9.508567 CCATCACATTATAGATGTAGATACACG 57.491 37.037 0.00 0.00 39.92 4.49
3298 3474 8.982723 GGAGGTATACCATCACATTATAGATGT 58.017 37.037 23.87 0.00 39.92 3.06
3310 3486 4.196193 CGCTTTTTGGAGGTATACCATCA 58.804 43.478 23.87 17.12 37.26 3.07
3318 3494 5.285651 CAAATTGAACGCTTTTTGGAGGTA 58.714 37.500 0.00 0.00 0.00 3.08
3324 3500 5.491973 CAAGACCAAATTGAACGCTTTTTG 58.508 37.500 0.00 0.00 0.00 2.44
3326 3502 3.555547 GCAAGACCAAATTGAACGCTTTT 59.444 39.130 0.00 0.00 0.00 2.27
3331 3507 3.004734 AGAAGGCAAGACCAAATTGAACG 59.995 43.478 0.00 0.00 43.14 3.95
3338 3514 4.522789 GGTCAATTAGAAGGCAAGACCAAA 59.477 41.667 0.00 0.00 42.65 3.28
3341 3517 2.678336 CGGTCAATTAGAAGGCAAGACC 59.322 50.000 0.00 0.00 40.39 3.85
3366 3542 3.769536 CGGGCAAGATTTGAATTACACC 58.230 45.455 0.00 0.00 0.00 4.16
3374 3550 2.749839 CCCGCGGGCAAGATTTGA 60.750 61.111 34.96 0.00 0.00 2.69
3387 3563 1.153804 GTCTTTCGAGAGGTCCCGC 60.154 63.158 2.75 0.00 0.00 6.13
3392 3568 5.047021 TGAATGATCAAGTCTTTCGAGAGGT 60.047 40.000 0.00 0.00 41.50 3.85
3424 3600 2.094182 GGCAGAATACTCGTTCCAGTGA 60.094 50.000 0.00 0.00 0.00 3.41
3425 3601 2.271800 GGCAGAATACTCGTTCCAGTG 58.728 52.381 0.00 0.00 0.00 3.66
3426 3602 1.207329 GGGCAGAATACTCGTTCCAGT 59.793 52.381 0.00 0.00 0.00 4.00
3427 3603 1.207089 TGGGCAGAATACTCGTTCCAG 59.793 52.381 0.00 0.00 0.00 3.86
3428 3604 1.271856 TGGGCAGAATACTCGTTCCA 58.728 50.000 0.00 0.00 0.00 3.53
3429 3605 2.396590 TTGGGCAGAATACTCGTTCC 57.603 50.000 0.00 0.00 0.00 3.62
3430 3606 3.335579 ACTTTGGGCAGAATACTCGTTC 58.664 45.455 0.00 0.00 0.00 3.95
3431 3607 3.418684 ACTTTGGGCAGAATACTCGTT 57.581 42.857 0.00 0.00 0.00 3.85
3432 3608 3.514309 ACTACTTTGGGCAGAATACTCGT 59.486 43.478 0.00 0.00 0.00 4.18
3433 3609 4.124851 ACTACTTTGGGCAGAATACTCG 57.875 45.455 0.00 0.00 0.00 4.18
3434 3610 5.122396 CACAACTACTTTGGGCAGAATACTC 59.878 44.000 0.00 0.00 39.84 2.59
3435 3611 5.003804 CACAACTACTTTGGGCAGAATACT 58.996 41.667 0.00 0.00 39.84 2.12
3436 3612 5.296813 CACAACTACTTTGGGCAGAATAC 57.703 43.478 0.00 0.00 39.84 1.89
3483 3659 4.260375 CCGCGAGTTTTTATGGAGAGAATG 60.260 45.833 8.23 0.00 0.00 2.67
3484 3660 3.871594 CCGCGAGTTTTTATGGAGAGAAT 59.128 43.478 8.23 0.00 0.00 2.40
3504 3680 1.359459 GGCAGTTCCGTCTTTAGCCG 61.359 60.000 0.00 0.00 0.00 5.52
3512 3688 1.796796 GAAGCATGGCAGTTCCGTC 59.203 57.895 0.00 0.00 37.80 4.79
3563 3739 2.180973 AGAGGAGGAGGGAGATATTGCA 59.819 50.000 0.00 0.00 0.00 4.08
3570 3746 3.135279 AGTATGAAGAGGAGGAGGGAGA 58.865 50.000 0.00 0.00 0.00 3.71
3573 3749 2.178984 AGGAGTATGAAGAGGAGGAGGG 59.821 54.545 0.00 0.00 0.00 4.30
3597 3773 2.882927 TTCCGATGATACCTCGTTGG 57.117 50.000 0.00 0.00 41.70 3.77
3601 3777 3.555956 CCAACTTTTCCGATGATACCTCG 59.444 47.826 0.00 0.00 35.92 4.63
3610 3786 3.485463 TGTGACTCCAACTTTTCCGAT 57.515 42.857 0.00 0.00 0.00 4.18
3614 3790 5.757850 AGTTGATGTGACTCCAACTTTTC 57.242 39.130 14.17 0.00 45.59 2.29
3619 3795 4.130118 ACAAGAGTTGATGTGACTCCAAC 58.870 43.478 10.91 10.91 43.55 3.77
3660 3836 7.108841 AGTTATACACCGAAGATTGAGCTTA 57.891 36.000 0.00 0.00 0.00 3.09
3685 3861 5.599732 TGTTGTGCTTTTCTTTGCATATGT 58.400 33.333 4.29 0.00 41.45 2.29
3693 3869 8.474831 AGGTAAAATACTGTTGTGCTTTTCTTT 58.525 29.630 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.