Multiple sequence alignment - TraesCS5A01G280700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G280700 chr5A 100.000 2665 0 0 1 2665 489842357 489845021 0.000000e+00 4922.0
1 TraesCS5A01G280700 chr5A 100.000 430 0 0 2777 3206 489845133 489845562 0.000000e+00 795.0
2 TraesCS5A01G280700 chr5A 77.869 732 129 24 1487 2200 489934131 489934847 1.060000e-114 424.0
3 TraesCS5A01G280700 chr5A 96.653 239 8 0 2968 3206 534898968 534899206 6.440000e-107 398.0
4 TraesCS5A01G280700 chr5A 77.733 247 25 11 2420 2665 19490548 19490331 1.210000e-24 124.0
5 TraesCS5A01G280700 chr5A 93.750 64 4 0 1026 1089 489933124 489933187 2.630000e-16 97.1
6 TraesCS5A01G280700 chr5D 92.867 2285 101 32 117 2355 387097052 387099320 0.000000e+00 3260.0
7 TraesCS5A01G280700 chr5D 90.722 291 21 3 2379 2665 387099306 387099594 1.800000e-102 383.0
8 TraesCS5A01G280700 chr5D 78.138 247 23 9 2420 2665 28727273 28727057 9.340000e-26 128.0
9 TraesCS5A01G280700 chr5D 95.312 64 3 0 1026 1089 387250267 387250330 5.660000e-18 102.0
10 TraesCS5A01G280700 chr5D 79.651 172 12 10 2415 2585 527848567 527848418 5.660000e-18 102.0
11 TraesCS5A01G280700 chr5D 100.000 29 0 0 2562 2590 553332600 553332572 2.000000e-03 54.7
12 TraesCS5A01G280700 chr5B 91.814 1637 90 23 607 2227 465254489 465256097 0.000000e+00 2241.0
13 TraesCS5A01G280700 chr5B 76.567 734 135 28 1487 2200 465824923 465825639 5.050000e-98 368.0
14 TraesCS5A01G280700 chr5B 95.161 62 3 0 1026 1087 465823994 465824055 7.320000e-17 99.0
15 TraesCS5A01G280700 chr5B 78.947 171 15 10 2415 2585 664511196 664511047 2.630000e-16 97.1
16 TraesCS5A01G280700 chr4A 97.403 231 4 1 2976 3206 494069648 494069876 3.000000e-105 392.0
17 TraesCS5A01G280700 chr7B 97.380 229 5 1 2976 3204 610350956 610351183 3.880000e-104 388.0
18 TraesCS5A01G280700 chrUn 96.537 231 7 1 2976 3206 91571305 91571076 6.490000e-102 381.0
19 TraesCS5A01G280700 chr7D 96.537 231 6 1 2976 3206 198019283 198019511 6.490000e-102 381.0
20 TraesCS5A01G280700 chr6D 96.507 229 7 1 2978 3206 460582839 460582612 8.400000e-101 377.0
21 TraesCS5A01G280700 chr6D 96.104 231 8 1 2976 3206 2099369 2099140 3.020000e-100 375.0
22 TraesCS5A01G280700 chr6D 93.750 64 4 0 1026 1089 162246543 162246480 2.630000e-16 97.1
23 TraesCS5A01G280700 chr3A 95.339 236 10 1 2971 3206 745462221 745462455 1.090000e-99 374.0
24 TraesCS5A01G280700 chr6A 95.299 234 10 1 2973 3206 400130021 400129789 1.400000e-98 370.0
25 TraesCS5A01G280700 chr6A 75.412 728 147 25 1487 2196 36859141 36858428 1.110000e-84 324.0
26 TraesCS5A01G280700 chr6A 78.873 142 11 5 2413 2551 515555267 515555142 9.540000e-11 78.7
27 TraesCS5A01G280700 chr7A 76.524 443 76 17 1 429 113603037 113602609 1.940000e-52 217.0
28 TraesCS5A01G280700 chr7A 100.000 28 0 0 2353 2380 166782242 166782269 6.000000e-03 52.8
29 TraesCS5A01G280700 chr2D 77.005 374 75 5 6 370 10304662 10305033 1.510000e-48 204.0
30 TraesCS5A01G280700 chr2D 78.286 175 33 4 1661 1834 346162352 346162522 1.220000e-19 108.0
31 TraesCS5A01G280700 chr1B 79.803 203 37 4 1 203 678062351 678062153 9.270000e-31 145.0
32 TraesCS5A01G280700 chr1A 78.138 247 34 12 2413 2656 472549755 472549984 4.310000e-29 139.0
33 TraesCS5A01G280700 chr1A 78.804 184 19 11 2415 2590 585628936 585628765 4.370000e-19 106.0
34 TraesCS5A01G280700 chr2B 80.000 175 30 4 1661 1834 412186040 412186210 1.210000e-24 124.0
35 TraesCS5A01G280700 chr2B 97.143 35 1 0 2815 2849 786128894 786128860 3.450000e-05 60.2
36 TraesCS5A01G280700 chr3B 76.208 269 37 16 2408 2665 158239210 158238958 2.020000e-22 117.0
37 TraesCS5A01G280700 chr3B 79.310 116 18 5 2809 2919 685389072 685389186 3.430000e-10 76.8
38 TraesCS5A01G280700 chr3B 85.965 57 6 1 2824 2878 166652675 166652731 3.450000e-05 60.2
39 TraesCS5A01G280700 chr2A 78.286 175 33 4 1661 1834 459929929 459930099 1.220000e-19 108.0
40 TraesCS5A01G280700 chr2A 79.245 106 13 5 2815 2920 709866619 709866523 7.420000e-07 65.8
41 TraesCS5A01G280700 chr3D 82.075 106 14 5 2817 2919 63404334 63404437 5.700000e-13 86.1
42 TraesCS5A01G280700 chr1D 80.531 113 14 5 2554 2665 487569005 487568900 2.650000e-11 80.5
43 TraesCS5A01G280700 chr1D 94.737 38 2 0 2815 2852 487568536 487568499 3.450000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G280700 chr5A 489842357 489845562 3205 False 2858.50 4922 100.0000 1 3206 2 chr5A.!!$F2 3205
1 TraesCS5A01G280700 chr5A 489933124 489934847 1723 False 260.55 424 85.8095 1026 2200 2 chr5A.!!$F3 1174
2 TraesCS5A01G280700 chr5D 387097052 387099594 2542 False 1821.50 3260 91.7945 117 2665 2 chr5D.!!$F2 2548
3 TraesCS5A01G280700 chr5B 465254489 465256097 1608 False 2241.00 2241 91.8140 607 2227 1 chr5B.!!$F1 1620
4 TraesCS5A01G280700 chr5B 465823994 465825639 1645 False 233.50 368 85.8640 1026 2200 2 chr5B.!!$F2 1174
5 TraesCS5A01G280700 chr6A 36858428 36859141 713 True 324.00 324 75.4120 1487 2196 1 chr6A.!!$R1 709

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.034863 TAGGGTTTTCATCGGGGCAC 60.035 55.0 0.0 0.0 0.0 5.01 F
107 108 0.106918 TGCCTTTGACGGTTCTGGTT 60.107 50.0 0.0 0.0 0.0 3.67 F
177 178 0.107654 CCACCAAATCGACCTCCTCC 60.108 60.0 0.0 0.0 0.0 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1013 1061 0.173708 CGTCCTCGAAGAAGAAGGGG 59.826 60.000 0.00 0.00 39.71 4.79 R
1978 2638 0.392998 GAGAAGAGCGCCCAATGGAA 60.393 55.000 2.29 0.00 0.00 3.53 R
2269 2935 1.340889 GACAGATGGGAGCAGCTCTAG 59.659 57.143 21.99 8.24 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.561725 GCCTGAATCTAGGGTTTTCATCG 59.438 47.826 0.00 0.00 38.32 3.84
23 24 4.130118 CCTGAATCTAGGGTTTTCATCGG 58.870 47.826 0.00 0.00 34.06 4.18
24 25 4.130118 CTGAATCTAGGGTTTTCATCGGG 58.870 47.826 0.00 0.00 0.00 5.14
25 26 3.118038 TGAATCTAGGGTTTTCATCGGGG 60.118 47.826 0.00 0.00 0.00 5.73
26 27 0.544697 TCTAGGGTTTTCATCGGGGC 59.455 55.000 0.00 0.00 0.00 5.80
27 28 0.254747 CTAGGGTTTTCATCGGGGCA 59.745 55.000 0.00 0.00 0.00 5.36
28 29 0.034863 TAGGGTTTTCATCGGGGCAC 60.035 55.000 0.00 0.00 0.00 5.01
29 30 1.605165 GGGTTTTCATCGGGGCACA 60.605 57.895 0.00 0.00 0.00 4.57
30 31 1.584495 GGTTTTCATCGGGGCACAC 59.416 57.895 0.00 0.00 0.00 3.82
31 32 1.175983 GGTTTTCATCGGGGCACACA 61.176 55.000 0.00 0.00 0.00 3.72
32 33 0.240945 GTTTTCATCGGGGCACACAG 59.759 55.000 0.00 0.00 0.00 3.66
33 34 0.893270 TTTTCATCGGGGCACACAGG 60.893 55.000 0.00 0.00 0.00 4.00
34 35 1.773856 TTTCATCGGGGCACACAGGA 61.774 55.000 0.00 0.00 0.00 3.86
35 36 1.773856 TTCATCGGGGCACACAGGAA 61.774 55.000 0.00 0.00 0.00 3.36
36 37 1.303236 CATCGGGGCACACAGGAAA 60.303 57.895 0.00 0.00 0.00 3.13
37 38 1.303317 ATCGGGGCACACAGGAAAC 60.303 57.895 0.00 0.00 0.00 2.78
38 39 3.353836 CGGGGCACACAGGAAACG 61.354 66.667 0.00 0.00 0.00 3.60
39 40 2.203294 GGGGCACACAGGAAACGT 60.203 61.111 0.00 0.00 0.00 3.99
40 41 2.551912 GGGGCACACAGGAAACGTG 61.552 63.158 0.00 0.00 39.59 4.49
41 42 1.525077 GGGCACACAGGAAACGTGA 60.525 57.895 0.00 0.00 37.95 4.35
42 43 1.098712 GGGCACACAGGAAACGTGAA 61.099 55.000 0.00 0.00 37.95 3.18
43 44 0.951558 GGCACACAGGAAACGTGAAT 59.048 50.000 0.00 0.00 37.95 2.57
44 45 1.069227 GGCACACAGGAAACGTGAATC 60.069 52.381 0.00 0.00 37.95 2.52
45 46 1.398451 GCACACAGGAAACGTGAATCG 60.398 52.381 0.00 0.00 46.00 3.34
46 47 0.865769 ACACAGGAAACGTGAATCGC 59.134 50.000 0.00 0.00 44.19 4.58
47 48 0.165944 CACAGGAAACGTGAATCGCC 59.834 55.000 0.00 0.00 44.19 5.54
48 49 0.953960 ACAGGAAACGTGAATCGCCC 60.954 55.000 0.00 0.00 44.19 6.13
49 50 1.740296 AGGAAACGTGAATCGCCCG 60.740 57.895 0.00 0.00 44.19 6.13
50 51 2.746803 GGAAACGTGAATCGCCCGG 61.747 63.158 0.00 0.00 44.19 5.73
51 52 3.376914 GAAACGTGAATCGCCCGGC 62.377 63.158 0.00 0.00 44.19 6.13
52 53 4.690719 AACGTGAATCGCCCGGCA 62.691 61.111 10.77 0.00 44.19 5.69
53 54 4.690719 ACGTGAATCGCCCGGCAA 62.691 61.111 10.77 0.00 44.19 4.52
54 55 4.160635 CGTGAATCGCCCGGCAAC 62.161 66.667 10.77 0.00 0.00 4.17
66 67 2.909965 GGCAACGCCTCCCAACAA 60.910 61.111 0.00 0.00 46.69 2.83
67 68 2.644992 GCAACGCCTCCCAACAAG 59.355 61.111 0.00 0.00 0.00 3.16
68 69 2.919494 GCAACGCCTCCCAACAAGG 61.919 63.158 0.00 0.00 36.95 3.61
69 70 1.528309 CAACGCCTCCCAACAAGGT 60.528 57.895 0.00 0.00 36.21 3.50
70 71 0.250553 CAACGCCTCCCAACAAGGTA 60.251 55.000 0.00 0.00 36.21 3.08
71 72 0.475044 AACGCCTCCCAACAAGGTAA 59.525 50.000 0.00 0.00 36.21 2.85
72 73 0.696501 ACGCCTCCCAACAAGGTAAT 59.303 50.000 0.00 0.00 36.21 1.89
73 74 1.094785 CGCCTCCCAACAAGGTAATG 58.905 55.000 0.00 0.00 36.21 1.90
74 75 1.339631 CGCCTCCCAACAAGGTAATGA 60.340 52.381 0.00 0.00 36.21 2.57
75 76 2.683742 CGCCTCCCAACAAGGTAATGAT 60.684 50.000 0.00 0.00 36.21 2.45
76 77 2.689983 GCCTCCCAACAAGGTAATGATG 59.310 50.000 0.00 0.00 36.21 3.07
77 78 2.689983 CCTCCCAACAAGGTAATGATGC 59.310 50.000 0.00 0.00 34.66 3.91
78 79 2.689983 CTCCCAACAAGGTAATGATGCC 59.310 50.000 0.00 0.00 34.66 4.40
79 80 2.042297 TCCCAACAAGGTAATGATGCCA 59.958 45.455 0.00 0.00 32.95 4.92
80 81 2.428171 CCCAACAAGGTAATGATGCCAG 59.572 50.000 0.00 0.00 32.95 4.85
81 82 2.159198 CCAACAAGGTAATGATGCCAGC 60.159 50.000 0.00 0.00 32.95 4.85
82 83 1.382522 ACAAGGTAATGATGCCAGCG 58.617 50.000 0.00 0.00 32.95 5.18
83 84 0.664761 CAAGGTAATGATGCCAGCGG 59.335 55.000 0.00 0.00 32.95 5.52
84 85 0.466189 AAGGTAATGATGCCAGCGGG 60.466 55.000 0.00 0.00 32.95 6.13
100 101 2.594592 GGCACTGCCTTTGACGGT 60.595 61.111 13.28 0.00 46.69 4.83
101 102 2.193536 GGCACTGCCTTTGACGGTT 61.194 57.895 13.28 0.00 46.69 4.44
102 103 1.282875 GCACTGCCTTTGACGGTTC 59.717 57.895 0.00 0.00 0.00 3.62
103 104 1.166531 GCACTGCCTTTGACGGTTCT 61.167 55.000 0.00 0.00 0.00 3.01
104 105 0.588252 CACTGCCTTTGACGGTTCTG 59.412 55.000 0.00 0.00 0.00 3.02
105 106 0.535102 ACTGCCTTTGACGGTTCTGG 60.535 55.000 0.00 0.00 0.00 3.86
106 107 0.535102 CTGCCTTTGACGGTTCTGGT 60.535 55.000 0.00 0.00 0.00 4.00
107 108 0.106918 TGCCTTTGACGGTTCTGGTT 60.107 50.000 0.00 0.00 0.00 3.67
108 109 0.310854 GCCTTTGACGGTTCTGGTTG 59.689 55.000 0.00 0.00 0.00 3.77
109 110 1.961793 CCTTTGACGGTTCTGGTTGA 58.038 50.000 0.00 0.00 0.00 3.18
110 111 1.873591 CCTTTGACGGTTCTGGTTGAG 59.126 52.381 0.00 0.00 0.00 3.02
111 112 1.873591 CTTTGACGGTTCTGGTTGAGG 59.126 52.381 0.00 0.00 0.00 3.86
112 113 1.124780 TTGACGGTTCTGGTTGAGGA 58.875 50.000 0.00 0.00 0.00 3.71
113 114 0.391597 TGACGGTTCTGGTTGAGGAC 59.608 55.000 0.00 0.00 0.00 3.85
114 115 0.666577 GACGGTTCTGGTTGAGGACG 60.667 60.000 0.00 0.00 29.37 4.79
115 116 1.111116 ACGGTTCTGGTTGAGGACGA 61.111 55.000 0.00 0.00 29.37 4.20
177 178 0.107654 CCACCAAATCGACCTCCTCC 60.108 60.000 0.00 0.00 0.00 4.30
178 179 0.613260 CACCAAATCGACCTCCTCCA 59.387 55.000 0.00 0.00 0.00 3.86
202 203 1.024579 CCAACACACCTATGGGCGAC 61.025 60.000 0.00 0.00 35.63 5.19
205 206 1.079405 CACACCTATGGGCGACGTT 60.079 57.895 0.00 0.00 35.63 3.99
256 257 3.451894 CGCTTGGAACCATGGCCC 61.452 66.667 13.04 14.27 0.00 5.80
325 326 1.018752 CGGATGATGCACACGTCCAA 61.019 55.000 24.34 0.00 41.83 3.53
358 359 2.487265 GGATCTCCACCGCAACCATATT 60.487 50.000 0.00 0.00 35.64 1.28
361 362 0.621082 TCCACCGCAACCATATTCCA 59.379 50.000 0.00 0.00 0.00 3.53
362 363 1.024271 CCACCGCAACCATATTCCAG 58.976 55.000 0.00 0.00 0.00 3.86
363 364 1.408127 CCACCGCAACCATATTCCAGA 60.408 52.381 0.00 0.00 0.00 3.86
371 372 1.069765 CATATTCCAGAGCCGCGGT 59.930 57.895 28.70 13.92 0.00 5.68
451 473 2.223044 GCGGTTCAAAGCTCTAAATCGG 60.223 50.000 8.92 0.00 0.00 4.18
457 479 2.802816 CAAAGCTCTAAATCGGATCGGG 59.197 50.000 0.00 0.00 0.00 5.14
461 483 1.546476 CTCTAAATCGGATCGGGAGGG 59.454 57.143 0.00 0.00 0.00 4.30
466 488 2.433646 ATCGGATCGGGAGGGAGAGG 62.434 65.000 0.00 0.00 0.00 3.69
475 497 1.721093 GGAGGGAGAGGATCGGGAGA 61.721 65.000 0.00 0.00 42.67 3.71
505 527 4.864334 GAGAGGGGCGGTGGCATG 62.864 72.222 0.00 0.00 42.47 4.06
551 576 1.900486 AGGTTCGGTTCTTCGGAGAAT 59.100 47.619 9.93 0.00 45.90 2.40
552 577 2.094130 AGGTTCGGTTCTTCGGAGAATC 60.094 50.000 9.93 8.22 45.90 2.52
590 624 3.262420 GACTTGTCATGTATTCGTGGCT 58.738 45.455 0.00 0.00 36.30 4.75
640 679 2.484264 AGCGGAGTTGATTTTTCTTCGG 59.516 45.455 0.00 0.00 31.71 4.30
643 684 4.435651 GCGGAGTTGATTTTTCTTCGGTAG 60.436 45.833 0.00 0.00 31.71 3.18
772 815 3.702048 GGAGCCTGGCCACGTACA 61.702 66.667 16.57 0.00 0.00 2.90
825 869 3.219928 ATCGAGCGGCGGTCATCT 61.220 61.111 34.25 17.70 41.33 2.90
834 878 0.321653 GGCGGTCATCTGGTCAAACT 60.322 55.000 0.00 0.00 0.00 2.66
899 943 2.125912 ATCCGCGCAGACACTCAC 60.126 61.111 8.75 0.00 0.00 3.51
901 945 4.700365 CCGCGCAGACACTCACGA 62.700 66.667 8.75 0.00 0.00 4.35
925 973 0.251634 TGCCAACTCCACGCATCATA 59.748 50.000 0.00 0.00 0.00 2.15
926 974 1.134128 TGCCAACTCCACGCATCATAT 60.134 47.619 0.00 0.00 0.00 1.78
940 988 3.424039 GCATCATATCGTCTCGGCAATTG 60.424 47.826 0.00 0.00 0.00 2.32
1004 1052 0.889186 GACAAGTTCACGGCCATGGT 60.889 55.000 14.67 0.00 0.00 3.55
1010 1058 1.068541 GTTCACGGCCATGGTTTCTTC 60.069 52.381 14.67 0.00 0.00 2.87
1011 1059 0.608035 TCACGGCCATGGTTTCTTCC 60.608 55.000 14.67 3.50 0.00 3.46
1012 1060 0.609131 CACGGCCATGGTTTCTTCCT 60.609 55.000 14.67 0.00 0.00 3.36
1013 1061 0.322546 ACGGCCATGGTTTCTTCCTC 60.323 55.000 14.67 0.00 0.00 3.71
1014 1062 1.032114 CGGCCATGGTTTCTTCCTCC 61.032 60.000 14.67 1.12 0.00 4.30
1015 1063 0.684479 GGCCATGGTTTCTTCCTCCC 60.684 60.000 14.67 0.00 0.00 4.30
1130 1178 3.034721 TCGACTGGATGTACAAACACC 57.965 47.619 0.00 2.29 38.78 4.16
1148 1199 3.254060 CACCCACTTAGACTGATTGACG 58.746 50.000 0.00 0.00 0.00 4.35
1422 2014 4.778579 AGAATTGATACATCAGCTGCAGT 58.221 39.130 16.64 12.30 38.19 4.40
1468 2120 4.459331 GACGTACGTGCGGCGGTA 62.459 66.667 28.16 0.00 46.52 4.02
2211 2871 3.181483 CCGATGACACAGAGTGATGATGA 60.181 47.826 3.88 0.00 36.96 2.92
2212 2872 3.795639 CGATGACACAGAGTGATGATGAC 59.204 47.826 3.88 0.00 36.96 3.06
2267 2933 2.167693 AGTGATACCGATTGCCGAAGAA 59.832 45.455 0.00 0.00 41.76 2.52
2269 2935 1.527311 GATACCGATTGCCGAAGAAGC 59.473 52.381 0.00 0.00 41.76 3.86
2302 2968 6.078456 TCCCATCTGTCCAAGAATGTAAAT 57.922 37.500 0.00 0.00 38.79 1.40
2303 2969 6.493166 TCCCATCTGTCCAAGAATGTAAATT 58.507 36.000 0.00 0.00 38.79 1.82
2304 2970 7.638444 TCCCATCTGTCCAAGAATGTAAATTA 58.362 34.615 0.00 0.00 38.79 1.40
2305 2971 8.112822 TCCCATCTGTCCAAGAATGTAAATTAA 58.887 33.333 0.00 0.00 38.79 1.40
2346 3012 6.818142 ACATCATGTGATTAATGACGTCTTGA 59.182 34.615 17.92 0.00 36.89 3.02
2347 3013 7.496920 ACATCATGTGATTAATGACGTCTTGAT 59.503 33.333 17.92 10.36 36.89 2.57
2348 3014 8.981647 CATCATGTGATTAATGACGTCTTGATA 58.018 33.333 17.92 0.00 36.89 2.15
2349 3015 8.940768 TCATGTGATTAATGACGTCTTGATAA 57.059 30.769 17.92 10.55 0.00 1.75
2350 3016 9.546428 TCATGTGATTAATGACGTCTTGATAAT 57.454 29.630 17.92 14.40 0.00 1.28
2351 3017 9.803130 CATGTGATTAATGACGTCTTGATAATC 57.197 33.333 17.92 20.78 32.85 1.75
2352 3018 9.770097 ATGTGATTAATGACGTCTTGATAATCT 57.230 29.630 25.38 14.30 33.22 2.40
2353 3019 9.599866 TGTGATTAATGACGTCTTGATAATCTT 57.400 29.630 25.38 8.18 33.22 2.40
2355 3021 9.261180 TGATTAATGACGTCTTGATAATCTTCC 57.739 33.333 25.38 13.02 33.22 3.46
2356 3022 9.261180 GATTAATGACGTCTTGATAATCTTCCA 57.739 33.333 17.92 0.00 30.73 3.53
2357 3023 9.613428 ATTAATGACGTCTTGATAATCTTCCAA 57.387 29.630 17.92 0.00 0.00 3.53
2358 3024 9.613428 TTAATGACGTCTTGATAATCTTCCAAT 57.387 29.630 17.92 0.00 0.00 3.16
2360 3026 9.613428 AATGACGTCTTGATAATCTTCCAATAA 57.387 29.630 17.92 0.00 0.00 1.40
2361 3027 9.784531 ATGACGTCTTGATAATCTTCCAATAAT 57.215 29.630 17.92 0.00 0.00 1.28
2362 3028 9.045223 TGACGTCTTGATAATCTTCCAATAATG 57.955 33.333 17.92 0.00 0.00 1.90
2363 3029 7.865707 ACGTCTTGATAATCTTCCAATAATGC 58.134 34.615 0.00 0.00 0.00 3.56
2364 3030 7.716998 ACGTCTTGATAATCTTCCAATAATGCT 59.283 33.333 0.00 0.00 0.00 3.79
2365 3031 9.208022 CGTCTTGATAATCTTCCAATAATGCTA 57.792 33.333 0.00 0.00 0.00 3.49
2379 3045 9.461312 TCCAATAATGCTAAACATACAAAGAGT 57.539 29.630 0.00 0.00 38.34 3.24
2380 3046 9.722056 CCAATAATGCTAAACATACAAAGAGTC 57.278 33.333 0.00 0.00 38.34 3.36
2397 3063 8.778358 ACAAAGAGTCTTCATAATCTTCAACAC 58.222 33.333 5.70 0.00 30.93 3.32
2399 3065 6.692486 AGAGTCTTCATAATCTTCAACACGT 58.308 36.000 0.00 0.00 0.00 4.49
2439 3105 2.646930 TGCTATTTCTCATGTGCCTGG 58.353 47.619 0.00 0.00 0.00 4.45
2488 3158 3.756117 TCCTTCTTCTTCCTTTCTTGGC 58.244 45.455 0.00 0.00 0.00 4.52
2496 3166 1.074951 CCTTTCTTGGCCGGACCTT 59.925 57.895 3.83 0.00 40.22 3.50
2513 3183 3.939837 TTGCAGGAGAAGCTCGCCG 62.940 63.158 0.00 0.00 41.52 6.46
2515 3185 3.452786 CAGGAGAAGCTCGCCGGA 61.453 66.667 5.05 0.00 41.52 5.14
2519 3189 1.215647 GAGAAGCTCGCCGGAGAAA 59.784 57.895 9.83 0.00 43.27 2.52
2539 3209 4.439253 AAAACTAGCCCCACCATCTATC 57.561 45.455 0.00 0.00 0.00 2.08
2544 3214 3.637821 AGCCCCACCATCTATCTTAGA 57.362 47.619 0.00 0.00 39.50 2.10
2591 3261 5.973124 CCATTATCTATCTTAGGGGTGGGAT 59.027 44.000 0.00 0.00 0.00 3.85
2595 3265 3.732742 TCTATCTTAGGGGTGGGATGAGA 59.267 47.826 0.00 0.00 0.00 3.27
2600 3270 2.592308 GGGTGGGATGAGAGGTGC 59.408 66.667 0.00 0.00 0.00 5.01
2623 3293 0.657840 GATCGCGGGAGGTTTTCATG 59.342 55.000 6.13 0.00 0.00 3.07
2632 3302 3.165071 GGAGGTTTTCATGGGTGATGTT 58.835 45.455 0.00 0.00 33.56 2.71
2651 3321 2.078665 GGGCTTAGAGGGATGGCCA 61.079 63.158 8.56 8.56 44.04 5.36
2816 3486 2.031919 CGGGCAGCAGGTGTTGTA 59.968 61.111 0.66 0.00 0.00 2.41
2817 3487 2.034879 CGGGCAGCAGGTGTTGTAG 61.035 63.158 0.66 0.00 0.00 2.74
2818 3488 1.675641 GGGCAGCAGGTGTTGTAGG 60.676 63.158 0.66 0.00 0.00 3.18
2819 3489 2.335712 GGCAGCAGGTGTTGTAGGC 61.336 63.158 0.66 0.00 0.00 3.93
2820 3490 1.302832 GCAGCAGGTGTTGTAGGCT 60.303 57.895 0.66 0.00 34.64 4.58
2821 3491 2.548178 CAGCAGGTGTTGTAGGCTG 58.452 57.895 0.00 0.00 44.91 4.85
2822 3492 0.957395 CAGCAGGTGTTGTAGGCTGG 60.957 60.000 0.00 0.00 46.10 4.85
2823 3493 1.675641 GCAGGTGTTGTAGGCTGGG 60.676 63.158 0.00 0.00 0.00 4.45
2824 3494 1.002134 CAGGTGTTGTAGGCTGGGG 60.002 63.158 0.00 0.00 0.00 4.96
2825 3495 2.231380 AGGTGTTGTAGGCTGGGGG 61.231 63.158 0.00 0.00 0.00 5.40
2826 3496 2.228480 GGTGTTGTAGGCTGGGGGA 61.228 63.158 0.00 0.00 0.00 4.81
2827 3497 1.571773 GGTGTTGTAGGCTGGGGGAT 61.572 60.000 0.00 0.00 0.00 3.85
2828 3498 0.107165 GTGTTGTAGGCTGGGGGATC 60.107 60.000 0.00 0.00 0.00 3.36
2829 3499 1.146263 GTTGTAGGCTGGGGGATCG 59.854 63.158 0.00 0.00 0.00 3.69
2830 3500 2.070039 TTGTAGGCTGGGGGATCGG 61.070 63.158 0.00 0.00 0.00 4.18
2831 3501 3.242291 GTAGGCTGGGGGATCGGG 61.242 72.222 0.00 0.00 0.00 5.14
2832 3502 3.444417 TAGGCTGGGGGATCGGGA 61.444 66.667 0.00 0.00 0.00 5.14
2833 3503 3.468390 TAGGCTGGGGGATCGGGAG 62.468 68.421 0.00 0.00 0.00 4.30
2835 3505 4.880426 GCTGGGGGATCGGGAGGA 62.880 72.222 0.00 0.00 0.00 3.71
2836 3506 2.525381 CTGGGGGATCGGGAGGAG 60.525 72.222 0.00 0.00 0.00 3.69
2837 3507 4.172232 TGGGGGATCGGGAGGAGG 62.172 72.222 0.00 0.00 0.00 4.30
2838 3508 3.846254 GGGGGATCGGGAGGAGGA 61.846 72.222 0.00 0.00 0.00 3.71
2839 3509 2.285868 GGGGATCGGGAGGAGGAA 59.714 66.667 0.00 0.00 0.00 3.36
2840 3510 1.839296 GGGGATCGGGAGGAGGAAG 60.839 68.421 0.00 0.00 0.00 3.46
2841 3511 1.233369 GGGATCGGGAGGAGGAAGA 59.767 63.158 0.00 0.00 0.00 2.87
2842 3512 0.398664 GGGATCGGGAGGAGGAAGAA 60.399 60.000 0.00 0.00 0.00 2.52
2843 3513 1.044611 GGATCGGGAGGAGGAAGAAG 58.955 60.000 0.00 0.00 0.00 2.85
2844 3514 1.044611 GATCGGGAGGAGGAAGAAGG 58.955 60.000 0.00 0.00 0.00 3.46
2845 3515 0.399233 ATCGGGAGGAGGAAGAAGGG 60.399 60.000 0.00 0.00 0.00 3.95
2846 3516 1.001760 CGGGAGGAGGAAGAAGGGA 59.998 63.158 0.00 0.00 0.00 4.20
2847 3517 1.045911 CGGGAGGAGGAAGAAGGGAG 61.046 65.000 0.00 0.00 0.00 4.30
2848 3518 0.692756 GGGAGGAGGAAGAAGGGAGG 60.693 65.000 0.00 0.00 0.00 4.30
2849 3519 0.340208 GGAGGAGGAAGAAGGGAGGA 59.660 60.000 0.00 0.00 0.00 3.71
2850 3520 1.273896 GGAGGAGGAAGAAGGGAGGAA 60.274 57.143 0.00 0.00 0.00 3.36
2851 3521 2.115427 GAGGAGGAAGAAGGGAGGAAG 58.885 57.143 0.00 0.00 0.00 3.46
2852 3522 1.725182 AGGAGGAAGAAGGGAGGAAGA 59.275 52.381 0.00 0.00 0.00 2.87
2853 3523 1.834896 GGAGGAAGAAGGGAGGAAGAC 59.165 57.143 0.00 0.00 0.00 3.01
2854 3524 1.478916 GAGGAAGAAGGGAGGAAGACG 59.521 57.143 0.00 0.00 0.00 4.18
2855 3525 1.077334 AGGAAGAAGGGAGGAAGACGA 59.923 52.381 0.00 0.00 0.00 4.20
2856 3526 2.112190 GGAAGAAGGGAGGAAGACGAT 58.888 52.381 0.00 0.00 0.00 3.73
2857 3527 2.159028 GGAAGAAGGGAGGAAGACGATG 60.159 54.545 0.00 0.00 0.00 3.84
2858 3528 2.534042 AGAAGGGAGGAAGACGATGA 57.466 50.000 0.00 0.00 0.00 2.92
2859 3529 2.821437 AGAAGGGAGGAAGACGATGAA 58.179 47.619 0.00 0.00 0.00 2.57
2860 3530 2.498078 AGAAGGGAGGAAGACGATGAAC 59.502 50.000 0.00 0.00 0.00 3.18
2861 3531 1.938585 AGGGAGGAAGACGATGAACA 58.061 50.000 0.00 0.00 0.00 3.18
2862 3532 2.257207 AGGGAGGAAGACGATGAACAA 58.743 47.619 0.00 0.00 0.00 2.83
2863 3533 2.840651 AGGGAGGAAGACGATGAACAAT 59.159 45.455 0.00 0.00 0.00 2.71
2864 3534 3.118592 AGGGAGGAAGACGATGAACAATC 60.119 47.826 0.00 0.00 0.00 2.67
2865 3535 3.118592 GGGAGGAAGACGATGAACAATCT 60.119 47.826 0.00 0.00 32.61 2.40
2866 3536 4.116238 GGAGGAAGACGATGAACAATCTC 58.884 47.826 0.00 0.00 32.61 2.75
2867 3537 3.775202 AGGAAGACGATGAACAATCTCG 58.225 45.455 0.00 0.00 38.34 4.04
2868 3538 3.444034 AGGAAGACGATGAACAATCTCGA 59.556 43.478 0.00 0.00 36.32 4.04
2869 3539 4.098654 AGGAAGACGATGAACAATCTCGAT 59.901 41.667 0.00 0.00 36.32 3.59
2870 3540 4.442733 GGAAGACGATGAACAATCTCGATC 59.557 45.833 0.00 0.00 36.32 3.69
2871 3541 4.639135 AGACGATGAACAATCTCGATCA 57.361 40.909 0.00 0.00 36.32 2.92
2872 3542 4.998788 AGACGATGAACAATCTCGATCAA 58.001 39.130 0.00 0.00 36.32 2.57
2873 3543 5.595885 AGACGATGAACAATCTCGATCAAT 58.404 37.500 0.00 0.00 36.32 2.57
2874 3544 6.045318 AGACGATGAACAATCTCGATCAATT 58.955 36.000 0.00 0.00 36.32 2.32
2875 3545 6.536582 AGACGATGAACAATCTCGATCAATTT 59.463 34.615 0.00 0.00 36.32 1.82
2876 3546 7.065085 AGACGATGAACAATCTCGATCAATTTT 59.935 33.333 0.00 0.00 36.32 1.82
2877 3547 6.963242 ACGATGAACAATCTCGATCAATTTTG 59.037 34.615 0.00 0.00 36.32 2.44
2878 3548 6.412943 CGATGAACAATCTCGATCAATTTTGG 59.587 38.462 0.00 0.00 34.41 3.28
2879 3549 6.816134 TGAACAATCTCGATCAATTTTGGA 57.184 33.333 0.00 0.00 0.00 3.53
2880 3550 6.611381 TGAACAATCTCGATCAATTTTGGAC 58.389 36.000 0.00 0.00 0.00 4.02
2881 3551 5.567138 ACAATCTCGATCAATTTTGGACC 57.433 39.130 0.00 0.00 0.00 4.46
2882 3552 5.009631 ACAATCTCGATCAATTTTGGACCA 58.990 37.500 0.00 0.00 0.00 4.02
2883 3553 5.653769 ACAATCTCGATCAATTTTGGACCAT 59.346 36.000 0.00 0.00 0.00 3.55
2884 3554 6.153340 ACAATCTCGATCAATTTTGGACCATT 59.847 34.615 0.00 0.00 0.00 3.16
2885 3555 5.565592 TCTCGATCAATTTTGGACCATTG 57.434 39.130 0.00 0.00 0.00 2.82
2886 3556 4.398988 TCTCGATCAATTTTGGACCATTGG 59.601 41.667 0.00 0.00 32.17 3.16
2887 3557 4.339748 TCGATCAATTTTGGACCATTGGA 58.660 39.130 10.37 0.00 32.17 3.53
2888 3558 4.955450 TCGATCAATTTTGGACCATTGGAT 59.045 37.500 10.37 0.00 32.17 3.41
2889 3559 5.067674 TCGATCAATTTTGGACCATTGGATC 59.932 40.000 10.37 3.31 32.17 3.36
2890 3560 4.717233 TCAATTTTGGACCATTGGATCG 57.283 40.909 10.37 0.00 32.17 3.69
2891 3561 4.339748 TCAATTTTGGACCATTGGATCGA 58.660 39.130 10.37 0.00 32.17 3.59
2892 3562 4.769488 TCAATTTTGGACCATTGGATCGAA 59.231 37.500 10.37 4.39 32.17 3.71
2893 3563 5.244851 TCAATTTTGGACCATTGGATCGAAA 59.755 36.000 10.37 12.51 32.17 3.46
2894 3564 5.937975 ATTTTGGACCATTGGATCGAAAT 57.062 34.783 10.37 14.02 0.00 2.17
2895 3565 5.736951 TTTTGGACCATTGGATCGAAATT 57.263 34.783 10.37 0.00 0.00 1.82
2896 3566 5.736951 TTTGGACCATTGGATCGAAATTT 57.263 34.783 10.37 0.00 0.00 1.82
2897 3567 4.717233 TGGACCATTGGATCGAAATTTG 57.283 40.909 10.37 0.00 0.00 2.32
2898 3568 4.339748 TGGACCATTGGATCGAAATTTGA 58.660 39.130 10.37 0.00 0.00 2.69
2899 3569 4.955450 TGGACCATTGGATCGAAATTTGAT 59.045 37.500 10.37 0.00 0.00 2.57
2900 3570 6.125719 TGGACCATTGGATCGAAATTTGATA 58.874 36.000 10.37 0.00 0.00 2.15
2901 3571 6.262944 TGGACCATTGGATCGAAATTTGATAG 59.737 38.462 10.37 0.00 0.00 2.08
2902 3572 6.263168 GGACCATTGGATCGAAATTTGATAGT 59.737 38.462 10.37 0.00 0.00 2.12
2903 3573 7.201821 GGACCATTGGATCGAAATTTGATAGTT 60.202 37.037 10.37 0.00 0.00 2.24
2904 3574 7.707104 ACCATTGGATCGAAATTTGATAGTTC 58.293 34.615 10.37 0.00 0.00 3.01
2905 3575 7.339212 ACCATTGGATCGAAATTTGATAGTTCA 59.661 33.333 10.37 0.00 30.37 3.18
2906 3576 8.355169 CCATTGGATCGAAATTTGATAGTTCAT 58.645 33.333 0.00 0.00 30.37 2.57
2944 3614 6.707440 TTTTTCAAGCACCTGACAAATAGA 57.293 33.333 0.00 0.00 0.00 1.98
2945 3615 5.689383 TTTCAAGCACCTGACAAATAGAC 57.311 39.130 0.00 0.00 0.00 2.59
2946 3616 4.350368 TCAAGCACCTGACAAATAGACA 57.650 40.909 0.00 0.00 0.00 3.41
2947 3617 4.318332 TCAAGCACCTGACAAATAGACAG 58.682 43.478 0.00 0.00 39.31 3.51
2948 3618 4.067896 CAAGCACCTGACAAATAGACAGT 58.932 43.478 0.00 0.00 38.17 3.55
2949 3619 3.668447 AGCACCTGACAAATAGACAGTG 58.332 45.455 0.00 0.00 38.17 3.66
2950 3620 2.744202 GCACCTGACAAATAGACAGTGG 59.256 50.000 0.00 0.00 38.17 4.00
2951 3621 2.744202 CACCTGACAAATAGACAGTGGC 59.256 50.000 0.00 0.00 38.17 5.01
2952 3622 2.002586 CCTGACAAATAGACAGTGGCG 58.997 52.381 0.00 0.00 38.17 5.69
2953 3623 2.002586 CTGACAAATAGACAGTGGCGG 58.997 52.381 0.00 0.00 35.66 6.13
2954 3624 1.621317 TGACAAATAGACAGTGGCGGA 59.379 47.619 0.00 0.00 0.00 5.54
2955 3625 2.271800 GACAAATAGACAGTGGCGGAG 58.728 52.381 0.00 0.00 0.00 4.63
2956 3626 1.066143 ACAAATAGACAGTGGCGGAGG 60.066 52.381 0.00 0.00 0.00 4.30
2970 3640 4.729918 GAGGCACTGCAGGGTGGG 62.730 72.222 19.18 2.56 41.55 4.61
2989 3659 4.153957 GGGGGACACAGATCAGGT 57.846 61.111 0.00 0.00 0.00 4.00
2990 3660 1.604378 GGGGGACACAGATCAGGTG 59.396 63.158 13.98 13.98 41.95 4.00
2991 3661 0.909610 GGGGGACACAGATCAGGTGA 60.910 60.000 20.35 0.00 39.53 4.02
2992 3662 0.250513 GGGGACACAGATCAGGTGAC 59.749 60.000 20.35 15.06 39.53 3.67
2993 3663 0.976641 GGGACACAGATCAGGTGACA 59.023 55.000 20.35 0.00 39.53 3.58
2994 3664 1.556911 GGGACACAGATCAGGTGACAT 59.443 52.381 20.35 2.54 39.53 3.06
2995 3665 2.625737 GGACACAGATCAGGTGACATG 58.374 52.381 20.35 0.00 39.53 3.21
2996 3666 2.005451 GACACAGATCAGGTGACATGC 58.995 52.381 20.35 4.76 39.53 4.06
2997 3667 1.348696 ACACAGATCAGGTGACATGCA 59.651 47.619 20.35 0.00 39.53 3.96
2998 3668 1.736126 CACAGATCAGGTGACATGCAC 59.264 52.381 10.99 10.63 46.98 4.57
3014 3684 2.330254 CACCTTTGCATGTCACCGT 58.670 52.632 0.00 0.00 0.00 4.83
3015 3685 0.040157 CACCTTTGCATGTCACCGTG 60.040 55.000 0.00 0.00 0.00 4.94
3016 3686 0.465460 ACCTTTGCATGTCACCGTGT 60.465 50.000 0.00 0.00 0.00 4.49
3017 3687 0.040157 CCTTTGCATGTCACCGTGTG 60.040 55.000 0.00 0.00 34.45 3.82
3018 3688 0.661187 CTTTGCATGTCACCGTGTGC 60.661 55.000 5.81 5.81 38.05 4.57
3019 3689 2.069465 TTTGCATGTCACCGTGTGCC 62.069 55.000 9.42 0.00 36.79 5.01
3020 3690 2.669569 GCATGTCACCGTGTGCCT 60.670 61.111 0.00 0.00 32.98 4.75
3021 3691 2.260869 GCATGTCACCGTGTGCCTT 61.261 57.895 0.00 0.00 32.98 4.35
3022 3692 1.575922 CATGTCACCGTGTGCCTTG 59.424 57.895 0.00 0.00 32.98 3.61
3023 3693 2.260869 ATGTCACCGTGTGCCTTGC 61.261 57.895 0.00 0.00 32.98 4.01
3024 3694 4.012895 GTCACCGTGTGCCTTGCG 62.013 66.667 0.00 0.00 32.98 4.85
3035 3705 2.749839 CCTTGCGGCCCGAATTCA 60.750 61.111 7.68 0.00 0.00 2.57
3036 3706 2.339556 CCTTGCGGCCCGAATTCAA 61.340 57.895 7.68 0.00 0.00 2.69
3037 3707 1.583986 CTTGCGGCCCGAATTCAAA 59.416 52.632 7.68 0.00 0.00 2.69
3038 3708 0.173255 CTTGCGGCCCGAATTCAAAT 59.827 50.000 7.68 0.00 0.00 2.32
3039 3709 0.605589 TTGCGGCCCGAATTCAAATT 59.394 45.000 7.68 0.00 0.00 1.82
3040 3710 0.605589 TGCGGCCCGAATTCAAATTT 59.394 45.000 7.68 0.00 0.00 1.82
3041 3711 1.819288 TGCGGCCCGAATTCAAATTTA 59.181 42.857 7.68 0.00 0.00 1.40
3042 3712 2.231478 TGCGGCCCGAATTCAAATTTAA 59.769 40.909 7.68 0.00 0.00 1.52
3043 3713 3.254892 GCGGCCCGAATTCAAATTTAAA 58.745 40.909 7.68 0.00 0.00 1.52
3044 3714 3.061563 GCGGCCCGAATTCAAATTTAAAC 59.938 43.478 7.68 0.00 0.00 2.01
3045 3715 4.238514 CGGCCCGAATTCAAATTTAAACA 58.761 39.130 0.00 0.00 0.00 2.83
3046 3716 4.867608 CGGCCCGAATTCAAATTTAAACAT 59.132 37.500 0.00 0.00 0.00 2.71
3047 3717 5.350091 CGGCCCGAATTCAAATTTAAACATT 59.650 36.000 0.00 0.00 0.00 2.71
3048 3718 6.531948 CGGCCCGAATTCAAATTTAAACATTA 59.468 34.615 0.00 0.00 0.00 1.90
3049 3719 7.463515 CGGCCCGAATTCAAATTTAAACATTAC 60.464 37.037 0.00 0.00 0.00 1.89
3050 3720 7.387945 GCCCGAATTCAAATTTAAACATTACG 58.612 34.615 6.22 0.00 0.00 3.18
3051 3721 7.273815 GCCCGAATTCAAATTTAAACATTACGA 59.726 33.333 6.22 0.00 0.00 3.43
3052 3722 9.130312 CCCGAATTCAAATTTAAACATTACGAA 57.870 29.630 6.22 0.00 0.00 3.85
3086 3756 3.945981 AAATCATGCATGTTCACAGCA 57.054 38.095 25.43 4.73 43.14 4.41
3087 3757 2.933495 ATCATGCATGTTCACAGCAC 57.067 45.000 25.43 0.00 41.60 4.40
3088 3758 1.606903 TCATGCATGTTCACAGCACA 58.393 45.000 25.43 0.00 41.60 4.57
3089 3759 2.164338 TCATGCATGTTCACAGCACAT 58.836 42.857 25.43 0.00 41.60 3.21
3090 3760 3.345414 TCATGCATGTTCACAGCACATA 58.655 40.909 25.43 0.00 41.60 2.29
3091 3761 3.949113 TCATGCATGTTCACAGCACATAT 59.051 39.130 25.43 0.00 41.60 1.78
3092 3762 4.399934 TCATGCATGTTCACAGCACATATT 59.600 37.500 25.43 0.00 41.60 1.28
3093 3763 5.589452 TCATGCATGTTCACAGCACATATTA 59.411 36.000 25.43 0.00 41.60 0.98
3094 3764 5.893897 TGCATGTTCACAGCACATATTAA 57.106 34.783 0.00 0.00 32.88 1.40
3095 3765 5.882553 TGCATGTTCACAGCACATATTAAG 58.117 37.500 0.00 0.00 32.88 1.85
3096 3766 5.647225 TGCATGTTCACAGCACATATTAAGA 59.353 36.000 0.00 0.00 32.88 2.10
3097 3767 6.319405 TGCATGTTCACAGCACATATTAAGAT 59.681 34.615 0.00 0.00 32.88 2.40
3098 3768 7.498570 TGCATGTTCACAGCACATATTAAGATA 59.501 33.333 0.00 0.00 32.88 1.98
3099 3769 8.344831 GCATGTTCACAGCACATATTAAGATAA 58.655 33.333 0.00 0.00 32.88 1.75
3100 3770 9.655769 CATGTTCACAGCACATATTAAGATAAC 57.344 33.333 0.00 0.00 32.88 1.89
3101 3771 8.208718 TGTTCACAGCACATATTAAGATAACC 57.791 34.615 0.00 0.00 0.00 2.85
3102 3772 7.282224 TGTTCACAGCACATATTAAGATAACCC 59.718 37.037 0.00 0.00 0.00 4.11
3103 3773 6.296026 TCACAGCACATATTAAGATAACCCC 58.704 40.000 0.00 0.00 0.00 4.95
3104 3774 6.101150 TCACAGCACATATTAAGATAACCCCT 59.899 38.462 0.00 0.00 0.00 4.79
3105 3775 6.428159 CACAGCACATATTAAGATAACCCCTC 59.572 42.308 0.00 0.00 0.00 4.30
3106 3776 6.101150 ACAGCACATATTAAGATAACCCCTCA 59.899 38.462 0.00 0.00 0.00 3.86
3107 3777 6.998074 CAGCACATATTAAGATAACCCCTCAA 59.002 38.462 0.00 0.00 0.00 3.02
3108 3778 7.502226 CAGCACATATTAAGATAACCCCTCAAA 59.498 37.037 0.00 0.00 0.00 2.69
3109 3779 8.058847 AGCACATATTAAGATAACCCCTCAAAA 58.941 33.333 0.00 0.00 0.00 2.44
3110 3780 8.691797 GCACATATTAAGATAACCCCTCAAAAA 58.308 33.333 0.00 0.00 0.00 1.94
3116 3786 9.768215 ATTAAGATAACCCCTCAAAAATTCAGA 57.232 29.630 0.00 0.00 0.00 3.27
3117 3787 9.768215 TTAAGATAACCCCTCAAAAATTCAGAT 57.232 29.630 0.00 0.00 0.00 2.90
3118 3788 7.888250 AGATAACCCCTCAAAAATTCAGATC 57.112 36.000 0.00 0.00 0.00 2.75
3119 3789 7.413446 AGATAACCCCTCAAAAATTCAGATCA 58.587 34.615 0.00 0.00 0.00 2.92
3120 3790 7.895429 AGATAACCCCTCAAAAATTCAGATCAA 59.105 33.333 0.00 0.00 0.00 2.57
3121 3791 6.745794 AACCCCTCAAAAATTCAGATCAAA 57.254 33.333 0.00 0.00 0.00 2.69
3122 3792 6.745794 ACCCCTCAAAAATTCAGATCAAAA 57.254 33.333 0.00 0.00 0.00 2.44
3123 3793 7.320384 ACCCCTCAAAAATTCAGATCAAAAT 57.680 32.000 0.00 0.00 0.00 1.82
3124 3794 7.748677 ACCCCTCAAAAATTCAGATCAAAATT 58.251 30.769 0.00 0.00 0.00 1.82
3125 3795 7.879677 ACCCCTCAAAAATTCAGATCAAAATTC 59.120 33.333 0.00 0.00 0.00 2.17
3126 3796 7.063780 CCCCTCAAAAATTCAGATCAAAATTCG 59.936 37.037 0.00 0.00 0.00 3.34
3127 3797 7.814107 CCCTCAAAAATTCAGATCAAAATTCGA 59.186 33.333 0.00 0.00 0.00 3.71
3128 3798 9.195411 CCTCAAAAATTCAGATCAAAATTCGAA 57.805 29.630 0.00 0.00 0.00 3.71
3137 3807 9.773328 TTCAGATCAAAATTCGAAACATACATC 57.227 29.630 0.00 0.31 0.00 3.06
3138 3808 8.116136 TCAGATCAAAATTCGAAACATACATCG 58.884 33.333 0.00 0.00 40.31 3.84
3139 3809 8.116136 CAGATCAAAATTCGAAACATACATCGA 58.884 33.333 0.00 0.00 45.48 3.59
3145 3815 4.104696 TCGAAACATACATCGAGAAGCA 57.895 40.909 0.00 0.00 42.61 3.91
3146 3816 4.490743 TCGAAACATACATCGAGAAGCAA 58.509 39.130 0.00 0.00 42.61 3.91
3147 3817 4.926832 TCGAAACATACATCGAGAAGCAAA 59.073 37.500 0.00 0.00 42.61 3.68
3148 3818 5.407084 TCGAAACATACATCGAGAAGCAAAA 59.593 36.000 0.00 0.00 42.61 2.44
3149 3819 6.073494 TCGAAACATACATCGAGAAGCAAAAA 60.073 34.615 0.00 0.00 42.61 1.94
3175 3845 8.081208 AGAGAAATATGTCATGAATAGTTGCG 57.919 34.615 0.00 0.00 0.00 4.85
3176 3846 7.928167 AGAGAAATATGTCATGAATAGTTGCGA 59.072 33.333 0.00 0.00 0.00 5.10
3177 3847 8.437360 AGAAATATGTCATGAATAGTTGCGAA 57.563 30.769 0.00 0.00 0.00 4.70
3178 3848 9.060347 AGAAATATGTCATGAATAGTTGCGAAT 57.940 29.630 0.00 0.00 0.00 3.34
3181 3851 9.494271 AATATGTCATGAATAGTTGCGAATAGT 57.506 29.630 0.00 0.00 0.00 2.12
3182 3852 7.792374 ATGTCATGAATAGTTGCGAATAGTT 57.208 32.000 0.00 0.00 0.00 2.24
3183 3853 7.234187 TGTCATGAATAGTTGCGAATAGTTC 57.766 36.000 0.00 0.00 0.00 3.01
3184 3854 7.041721 TGTCATGAATAGTTGCGAATAGTTCT 58.958 34.615 0.00 0.00 0.00 3.01
3185 3855 7.222805 TGTCATGAATAGTTGCGAATAGTTCTC 59.777 37.037 0.00 0.00 0.00 2.87
3186 3856 7.436673 GTCATGAATAGTTGCGAATAGTTCTCT 59.563 37.037 0.00 0.00 0.00 3.10
3187 3857 7.436376 TCATGAATAGTTGCGAATAGTTCTCTG 59.564 37.037 0.00 0.00 0.00 3.35
3188 3858 6.631016 TGAATAGTTGCGAATAGTTCTCTGT 58.369 36.000 0.00 0.00 0.00 3.41
3189 3859 7.768240 TGAATAGTTGCGAATAGTTCTCTGTA 58.232 34.615 0.00 0.00 0.00 2.74
3190 3860 8.414003 TGAATAGTTGCGAATAGTTCTCTGTAT 58.586 33.333 0.00 0.00 0.00 2.29
3191 3861 9.894783 GAATAGTTGCGAATAGTTCTCTGTATA 57.105 33.333 0.00 0.00 0.00 1.47
3192 3862 9.680315 AATAGTTGCGAATAGTTCTCTGTATAC 57.320 33.333 0.00 0.00 0.00 1.47
3193 3863 7.336161 AGTTGCGAATAGTTCTCTGTATACT 57.664 36.000 4.17 0.00 0.00 2.12
3194 3864 8.447924 AGTTGCGAATAGTTCTCTGTATACTA 57.552 34.615 4.17 0.00 0.00 1.82
3195 3865 9.069082 AGTTGCGAATAGTTCTCTGTATACTAT 57.931 33.333 4.17 0.00 36.83 2.12
3196 3866 9.680315 GTTGCGAATAGTTCTCTGTATACTATT 57.320 33.333 4.17 0.00 43.88 1.73
3205 3875 9.634021 AGTTCTCTGTATACTATTCACATCTGA 57.366 33.333 4.17 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.561725 CGATGAAAACCCTAGATTCAGGC 59.438 47.826 0.00 0.00 36.59 4.85
1 2 4.130118 CCGATGAAAACCCTAGATTCAGG 58.870 47.826 0.00 0.00 36.59 3.86
2 3 4.130118 CCCGATGAAAACCCTAGATTCAG 58.870 47.826 0.00 0.00 36.59 3.02
3 4 3.118038 CCCCGATGAAAACCCTAGATTCA 60.118 47.826 0.00 0.00 37.47 2.57
4 5 3.477530 CCCCGATGAAAACCCTAGATTC 58.522 50.000 0.00 0.00 0.00 2.52
5 6 2.422945 GCCCCGATGAAAACCCTAGATT 60.423 50.000 0.00 0.00 0.00 2.40
6 7 1.143073 GCCCCGATGAAAACCCTAGAT 59.857 52.381 0.00 0.00 0.00 1.98
7 8 0.544697 GCCCCGATGAAAACCCTAGA 59.455 55.000 0.00 0.00 0.00 2.43
8 9 0.254747 TGCCCCGATGAAAACCCTAG 59.745 55.000 0.00 0.00 0.00 3.02
9 10 0.034863 GTGCCCCGATGAAAACCCTA 60.035 55.000 0.00 0.00 0.00 3.53
10 11 1.304134 GTGCCCCGATGAAAACCCT 60.304 57.895 0.00 0.00 0.00 4.34
11 12 1.605165 TGTGCCCCGATGAAAACCC 60.605 57.895 0.00 0.00 0.00 4.11
12 13 1.175983 TGTGTGCCCCGATGAAAACC 61.176 55.000 0.00 0.00 0.00 3.27
13 14 0.240945 CTGTGTGCCCCGATGAAAAC 59.759 55.000 0.00 0.00 0.00 2.43
14 15 0.893270 CCTGTGTGCCCCGATGAAAA 60.893 55.000 0.00 0.00 0.00 2.29
15 16 1.303236 CCTGTGTGCCCCGATGAAA 60.303 57.895 0.00 0.00 0.00 2.69
16 17 1.773856 TTCCTGTGTGCCCCGATGAA 61.774 55.000 0.00 0.00 0.00 2.57
17 18 1.773856 TTTCCTGTGTGCCCCGATGA 61.774 55.000 0.00 0.00 0.00 2.92
18 19 1.303236 TTTCCTGTGTGCCCCGATG 60.303 57.895 0.00 0.00 0.00 3.84
19 20 1.303317 GTTTCCTGTGTGCCCCGAT 60.303 57.895 0.00 0.00 0.00 4.18
20 21 2.112297 GTTTCCTGTGTGCCCCGA 59.888 61.111 0.00 0.00 0.00 5.14
21 22 3.353836 CGTTTCCTGTGTGCCCCG 61.354 66.667 0.00 0.00 0.00 5.73
22 23 2.203294 ACGTTTCCTGTGTGCCCC 60.203 61.111 0.00 0.00 0.00 5.80
23 24 1.098712 TTCACGTTTCCTGTGTGCCC 61.099 55.000 0.00 0.00 38.48 5.36
24 25 0.951558 ATTCACGTTTCCTGTGTGCC 59.048 50.000 0.00 0.00 38.48 5.01
25 26 1.398451 CGATTCACGTTTCCTGTGTGC 60.398 52.381 0.00 0.00 38.48 4.57
26 27 1.398451 GCGATTCACGTTTCCTGTGTG 60.398 52.381 0.00 0.00 44.60 3.82
27 28 0.865769 GCGATTCACGTTTCCTGTGT 59.134 50.000 0.00 0.00 44.60 3.72
28 29 0.165944 GGCGATTCACGTTTCCTGTG 59.834 55.000 0.00 0.00 44.60 3.66
29 30 0.953960 GGGCGATTCACGTTTCCTGT 60.954 55.000 0.00 0.00 44.60 4.00
30 31 1.794222 GGGCGATTCACGTTTCCTG 59.206 57.895 0.00 0.00 44.60 3.86
31 32 1.740296 CGGGCGATTCACGTTTCCT 60.740 57.895 0.00 0.00 44.60 3.36
32 33 2.746803 CCGGGCGATTCACGTTTCC 61.747 63.158 0.00 0.00 44.60 3.13
33 34 2.782615 CCGGGCGATTCACGTTTC 59.217 61.111 0.00 0.00 44.60 2.78
34 35 3.428282 GCCGGGCGATTCACGTTT 61.428 61.111 1.81 0.00 44.60 3.60
35 36 4.690719 TGCCGGGCGATTCACGTT 62.691 61.111 15.40 0.00 44.60 3.99
36 37 4.690719 TTGCCGGGCGATTCACGT 62.691 61.111 15.40 0.00 44.60 4.49
37 38 4.160635 GTTGCCGGGCGATTCACG 62.161 66.667 13.09 0.00 45.66 4.35
38 39 4.160635 CGTTGCCGGGCGATTCAC 62.161 66.667 13.09 3.78 0.00 3.18
50 51 2.644992 CTTGTTGGGAGGCGTTGC 59.355 61.111 0.00 0.00 0.00 4.17
51 52 0.250553 TACCTTGTTGGGAGGCGTTG 60.251 55.000 0.00 0.00 41.11 4.10
52 53 0.475044 TTACCTTGTTGGGAGGCGTT 59.525 50.000 0.00 0.00 41.11 4.84
53 54 0.696501 ATTACCTTGTTGGGAGGCGT 59.303 50.000 0.00 0.00 41.11 5.68
54 55 1.094785 CATTACCTTGTTGGGAGGCG 58.905 55.000 0.00 0.00 41.11 5.52
55 56 2.507407 TCATTACCTTGTTGGGAGGC 57.493 50.000 0.00 0.00 41.11 4.70
56 57 2.689983 GCATCATTACCTTGTTGGGAGG 59.310 50.000 0.00 0.00 41.11 4.30
57 58 2.689983 GGCATCATTACCTTGTTGGGAG 59.310 50.000 0.00 0.00 41.11 4.30
58 59 2.042297 TGGCATCATTACCTTGTTGGGA 59.958 45.455 0.00 0.00 41.11 4.37
59 60 2.428171 CTGGCATCATTACCTTGTTGGG 59.572 50.000 0.00 0.00 41.11 4.12
60 61 2.159198 GCTGGCATCATTACCTTGTTGG 60.159 50.000 0.00 0.00 42.93 3.77
61 62 2.478370 CGCTGGCATCATTACCTTGTTG 60.478 50.000 0.00 0.00 0.00 3.33
62 63 1.745087 CGCTGGCATCATTACCTTGTT 59.255 47.619 0.00 0.00 0.00 2.83
63 64 1.382522 CGCTGGCATCATTACCTTGT 58.617 50.000 0.00 0.00 0.00 3.16
64 65 0.664761 CCGCTGGCATCATTACCTTG 59.335 55.000 0.00 0.00 0.00 3.61
65 66 0.466189 CCCGCTGGCATCATTACCTT 60.466 55.000 0.00 0.00 0.00 3.50
66 67 1.149174 CCCGCTGGCATCATTACCT 59.851 57.895 0.00 0.00 0.00 3.08
67 68 3.749981 CCCGCTGGCATCATTACC 58.250 61.111 0.00 0.00 0.00 2.85
84 85 1.166531 AGAACCGTCAAAGGCAGTGC 61.167 55.000 6.55 6.55 33.69 4.40
85 86 0.588252 CAGAACCGTCAAAGGCAGTG 59.412 55.000 0.00 0.00 33.69 3.66
86 87 0.535102 CCAGAACCGTCAAAGGCAGT 60.535 55.000 0.00 0.00 33.69 4.40
87 88 0.535102 ACCAGAACCGTCAAAGGCAG 60.535 55.000 0.00 0.00 33.69 4.85
88 89 0.106918 AACCAGAACCGTCAAAGGCA 60.107 50.000 0.00 0.00 33.69 4.75
89 90 0.310854 CAACCAGAACCGTCAAAGGC 59.689 55.000 0.00 0.00 33.69 4.35
90 91 1.873591 CTCAACCAGAACCGTCAAAGG 59.126 52.381 0.00 0.00 37.30 3.11
91 92 1.873591 CCTCAACCAGAACCGTCAAAG 59.126 52.381 0.00 0.00 0.00 2.77
92 93 1.487142 TCCTCAACCAGAACCGTCAAA 59.513 47.619 0.00 0.00 0.00 2.69
93 94 1.124780 TCCTCAACCAGAACCGTCAA 58.875 50.000 0.00 0.00 0.00 3.18
94 95 0.391597 GTCCTCAACCAGAACCGTCA 59.608 55.000 0.00 0.00 0.00 4.35
95 96 0.666577 CGTCCTCAACCAGAACCGTC 60.667 60.000 0.00 0.00 0.00 4.79
96 97 1.111116 TCGTCCTCAACCAGAACCGT 61.111 55.000 0.00 0.00 0.00 4.83
97 98 0.032952 TTCGTCCTCAACCAGAACCG 59.967 55.000 0.00 0.00 0.00 4.44
98 99 1.509703 GTTCGTCCTCAACCAGAACC 58.490 55.000 0.00 0.00 36.23 3.62
99 100 1.202604 TGGTTCGTCCTCAACCAGAAC 60.203 52.381 1.74 0.00 46.88 3.01
100 101 1.124780 TGGTTCGTCCTCAACCAGAA 58.875 50.000 1.74 0.00 46.88 3.02
101 102 2.829094 TGGTTCGTCCTCAACCAGA 58.171 52.632 1.74 0.00 46.88 3.86
104 105 0.250338 AGCTTGGTTCGTCCTCAACC 60.250 55.000 0.00 0.00 43.35 3.77
105 106 1.594331 AAGCTTGGTTCGTCCTCAAC 58.406 50.000 0.00 0.00 37.07 3.18
106 107 2.218603 GAAAGCTTGGTTCGTCCTCAA 58.781 47.619 0.00 0.00 37.07 3.02
107 108 1.872237 CGAAAGCTTGGTTCGTCCTCA 60.872 52.381 10.23 0.00 42.23 3.86
108 109 0.790814 CGAAAGCTTGGTTCGTCCTC 59.209 55.000 10.23 0.00 42.23 3.71
109 110 2.914379 CGAAAGCTTGGTTCGTCCT 58.086 52.632 10.23 0.00 42.23 3.85
177 178 3.216800 CCCATAGGTGTGTTGGATGATG 58.783 50.000 0.00 0.00 31.94 3.07
178 179 2.423373 GCCCATAGGTGTGTTGGATGAT 60.423 50.000 0.00 0.00 34.57 2.45
264 265 1.768077 GCCCCTCTACCTGGCTCAT 60.768 63.158 0.00 0.00 42.01 2.90
303 304 3.928769 CGTGTGCATCATCCGGCG 61.929 66.667 0.00 0.00 0.00 6.46
305 306 2.173669 GGACGTGTGCATCATCCGG 61.174 63.158 0.00 0.00 0.00 5.14
310 311 1.064803 GTGTTTTGGACGTGTGCATCA 59.935 47.619 0.00 0.00 0.00 3.07
325 326 1.375523 GAGATCCGCGTGGGTGTTT 60.376 57.895 16.49 0.00 37.00 2.83
362 363 4.821589 CTTCCTCCACCGCGGCTC 62.822 72.222 28.58 0.00 33.14 4.70
429 430 2.673368 CGATTTAGAGCTTTGAACCGCT 59.327 45.455 0.00 0.00 39.61 5.52
434 435 4.119862 CCGATCCGATTTAGAGCTTTGAA 58.880 43.478 0.00 0.00 0.00 2.69
451 473 0.963355 CGATCCTCTCCCTCCCGATC 60.963 65.000 0.00 0.00 0.00 3.69
457 479 0.186386 TTCTCCCGATCCTCTCCCTC 59.814 60.000 0.00 0.00 0.00 4.30
461 483 1.044611 CCCTTTCTCCCGATCCTCTC 58.955 60.000 0.00 0.00 0.00 3.20
466 488 1.830836 GACCCCCTTTCTCCCGATC 59.169 63.158 0.00 0.00 0.00 3.69
475 497 1.306226 CCTCTCCTCGACCCCCTTT 60.306 63.158 0.00 0.00 0.00 3.11
503 525 1.690633 AGCCGTCATCCCTGTCCAT 60.691 57.895 0.00 0.00 0.00 3.41
504 526 2.284625 AGCCGTCATCCCTGTCCA 60.285 61.111 0.00 0.00 0.00 4.02
505 527 1.899437 TTCAGCCGTCATCCCTGTCC 61.899 60.000 0.00 0.00 0.00 4.02
507 529 0.179000 GATTCAGCCGTCATCCCTGT 59.821 55.000 0.00 0.00 0.00 4.00
508 530 0.533755 GGATTCAGCCGTCATCCCTG 60.534 60.000 0.00 0.00 31.66 4.45
509 531 0.692419 AGGATTCAGCCGTCATCCCT 60.692 55.000 0.00 0.00 37.77 4.20
510 532 0.533755 CAGGATTCAGCCGTCATCCC 60.534 60.000 0.00 0.00 37.77 3.85
511 533 0.465705 TCAGGATTCAGCCGTCATCC 59.534 55.000 0.00 0.00 37.36 3.51
566 591 2.029244 CACGAATACATGACAAGTCGGC 59.971 50.000 16.76 0.00 32.96 5.54
640 679 0.598680 ATGCATCTCGGCGCTTCTAC 60.599 55.000 7.64 0.00 36.28 2.59
643 684 2.602322 GGATGCATCTCGGCGCTTC 61.602 63.158 25.28 2.44 36.28 3.86
772 815 1.591158 CGGCGAACAAAGCGTATGTAT 59.409 47.619 0.00 0.00 35.00 2.29
825 869 3.485394 TGCAGCTTGATTAGTTTGACCA 58.515 40.909 0.00 0.00 0.00 4.02
834 878 1.550524 AGGTCGTCTGCAGCTTGATTA 59.449 47.619 9.47 0.00 0.00 1.75
899 943 0.374758 CGTGGAGTTGGCAATGATCG 59.625 55.000 1.92 1.98 0.00 3.69
901 945 0.608856 TGCGTGGAGTTGGCAATGAT 60.609 50.000 1.92 0.00 33.01 2.45
925 973 0.249120 TGTCCAATTGCCGAGACGAT 59.751 50.000 0.00 0.00 31.75 3.73
926 974 0.669318 GTGTCCAATTGCCGAGACGA 60.669 55.000 0.00 0.00 31.75 4.20
940 988 0.668535 GGAACTTGCAAGTGGTGTCC 59.331 55.000 31.73 27.86 39.66 4.02
1004 1052 3.008049 CGAAGAAGAAGGGGAGGAAGAAA 59.992 47.826 0.00 0.00 0.00 2.52
1010 1058 0.827368 CCTCGAAGAAGAAGGGGAGG 59.173 60.000 0.00 0.00 34.09 4.30
1011 1059 1.478916 GTCCTCGAAGAAGAAGGGGAG 59.521 57.143 0.00 0.00 34.09 4.30
1012 1060 1.558233 GTCCTCGAAGAAGAAGGGGA 58.442 55.000 0.00 0.00 34.09 4.81
1013 1061 0.173708 CGTCCTCGAAGAAGAAGGGG 59.826 60.000 0.00 0.00 39.71 4.79
1014 1062 1.174783 TCGTCCTCGAAGAAGAAGGG 58.825 55.000 0.00 0.00 43.34 3.95
1130 1178 3.675225 CACACGTCAATCAGTCTAAGTGG 59.325 47.826 0.00 0.00 33.18 4.00
1148 1199 1.601162 CCACATGCTGAAAGTGCACAC 60.601 52.381 21.04 10.50 43.59 3.82
1406 1998 4.952262 TGAAAACTGCAGCTGATGTATC 57.048 40.909 20.43 15.62 0.00 2.24
1422 2014 6.146216 CACGGTAGCAAATTACACATGAAAA 58.854 36.000 0.00 0.00 0.00 2.29
1464 2116 6.580791 CCTGATAAACAAACACAACAATACCG 59.419 38.462 0.00 0.00 0.00 4.02
1468 2120 5.296748 GCCCTGATAAACAAACACAACAAT 58.703 37.500 0.00 0.00 0.00 2.71
1890 2550 4.821589 GGCTCGAAGGCCGACCAG 62.822 72.222 0.00 0.00 43.23 4.00
1978 2638 0.392998 GAGAAGAGCGCCCAATGGAA 60.393 55.000 2.29 0.00 0.00 3.53
2269 2935 1.340889 GACAGATGGGAGCAGCTCTAG 59.659 57.143 21.99 8.24 0.00 2.43
2302 2968 3.879998 TGTATCGCAATGGGCTTCTTAA 58.120 40.909 0.00 0.00 41.67 1.85
2303 2969 3.552132 TGTATCGCAATGGGCTTCTTA 57.448 42.857 0.00 0.00 41.67 2.10
2304 2970 2.418368 TGTATCGCAATGGGCTTCTT 57.582 45.000 0.00 0.00 41.67 2.52
2305 2971 2.158769 TGATGTATCGCAATGGGCTTCT 60.159 45.455 0.00 0.00 41.67 2.85
2353 3019 9.461312 ACTCTTTGTATGTTTAGCATTATTGGA 57.539 29.630 0.00 0.00 38.94 3.53
2354 3020 9.722056 GACTCTTTGTATGTTTAGCATTATTGG 57.278 33.333 0.00 0.00 38.94 3.16
2358 3024 9.719355 TGAAGACTCTTTGTATGTTTAGCATTA 57.281 29.630 0.00 0.00 38.94 1.90
2359 3025 8.621532 TGAAGACTCTTTGTATGTTTAGCATT 57.378 30.769 0.00 0.00 38.94 3.56
2360 3026 8.798859 ATGAAGACTCTTTGTATGTTTAGCAT 57.201 30.769 0.00 0.00 41.42 3.79
2361 3027 9.719355 TTATGAAGACTCTTTGTATGTTTAGCA 57.281 29.630 0.00 0.00 0.00 3.49
2370 3036 9.996554 TGTTGAAGATTATGAAGACTCTTTGTA 57.003 29.630 0.00 0.00 0.00 2.41
2371 3037 8.778358 GTGTTGAAGATTATGAAGACTCTTTGT 58.222 33.333 0.00 0.00 0.00 2.83
2372 3038 7.954248 CGTGTTGAAGATTATGAAGACTCTTTG 59.046 37.037 0.00 0.00 0.00 2.77
2373 3039 7.657761 ACGTGTTGAAGATTATGAAGACTCTTT 59.342 33.333 0.00 0.00 0.00 2.52
2374 3040 7.155328 ACGTGTTGAAGATTATGAAGACTCTT 58.845 34.615 0.00 0.00 0.00 2.85
2375 3041 6.692486 ACGTGTTGAAGATTATGAAGACTCT 58.308 36.000 0.00 0.00 0.00 3.24
2376 3042 6.952935 ACGTGTTGAAGATTATGAAGACTC 57.047 37.500 0.00 0.00 0.00 3.36
2377 3043 6.929049 TCAACGTGTTGAAGATTATGAAGACT 59.071 34.615 12.74 0.00 45.56 3.24
2378 3044 7.117241 TCAACGTGTTGAAGATTATGAAGAC 57.883 36.000 12.74 0.00 45.56 3.01
2397 3063 4.985044 AATCCGTAGAAACACTTCAACG 57.015 40.909 0.00 0.00 33.64 4.10
2399 3065 4.819630 AGCAAATCCGTAGAAACACTTCAA 59.180 37.500 0.00 0.00 33.64 2.69
2404 3070 7.073342 AGAAATAGCAAATCCGTAGAAACAC 57.927 36.000 0.00 0.00 0.00 3.32
2405 3071 6.876789 TGAGAAATAGCAAATCCGTAGAAACA 59.123 34.615 0.00 0.00 0.00 2.83
2439 3105 5.765072 GTGACTAACACGAGAAGGAATTC 57.235 43.478 0.00 0.00 39.78 2.17
2468 3134 2.822561 GGCCAAGAAAGGAAGAAGAAGG 59.177 50.000 0.00 0.00 0.00 3.46
2476 3142 1.074248 GGTCCGGCCAAGAAAGGAA 59.926 57.895 2.24 0.00 37.17 3.36
2478 3144 1.074951 AAGGTCCGGCCAAGAAAGG 59.925 57.895 15.92 0.00 40.61 3.11
2480 3146 1.901464 GCAAGGTCCGGCCAAGAAA 60.901 57.895 15.92 0.00 40.61 2.52
2496 3166 4.441695 CGGCGAGCTTCTCCTGCA 62.442 66.667 0.00 0.00 0.00 4.41
2513 3183 1.074889 TGGTGGGGCTAGTTTTTCTCC 59.925 52.381 0.00 0.00 0.00 3.71
2515 3185 2.649816 AGATGGTGGGGCTAGTTTTTCT 59.350 45.455 0.00 0.00 0.00 2.52
2519 3189 3.669949 AGATAGATGGTGGGGCTAGTTT 58.330 45.455 0.00 0.00 0.00 2.66
2539 3209 6.528423 CCATTACTTCACGTCTTCACTCTAAG 59.472 42.308 0.00 0.00 0.00 2.18
2544 3214 3.326747 GCCATTACTTCACGTCTTCACT 58.673 45.455 0.00 0.00 0.00 3.41
2585 3255 2.187946 CCGCACCTCTCATCCCAC 59.812 66.667 0.00 0.00 0.00 4.61
2591 3261 3.147595 CGATCCCCGCACCTCTCA 61.148 66.667 0.00 0.00 0.00 3.27
2610 3280 2.102578 CATCACCCATGAAAACCTCCC 58.897 52.381 0.00 0.00 38.69 4.30
2615 3285 2.612721 GCCCAACATCACCCATGAAAAC 60.613 50.000 0.00 0.00 38.69 2.43
2623 3293 1.408822 CCTCTAAGCCCAACATCACCC 60.409 57.143 0.00 0.00 0.00 4.61
2632 3302 2.078665 GGCCATCCCTCTAAGCCCA 61.079 63.158 0.00 0.00 37.66 5.36
2799 3469 2.031919 TACAACACCTGCTGCCCG 59.968 61.111 0.00 0.00 0.00 6.13
2800 3470 1.675641 CCTACAACACCTGCTGCCC 60.676 63.158 0.00 0.00 0.00 5.36
2801 3471 2.335712 GCCTACAACACCTGCTGCC 61.336 63.158 0.00 0.00 0.00 4.85
2802 3472 1.302832 AGCCTACAACACCTGCTGC 60.303 57.895 0.00 0.00 0.00 5.25
2803 3473 0.957395 CCAGCCTACAACACCTGCTG 60.957 60.000 0.00 0.00 46.82 4.41
2804 3474 1.376466 CCAGCCTACAACACCTGCT 59.624 57.895 0.00 0.00 0.00 4.24
2805 3475 1.675641 CCCAGCCTACAACACCTGC 60.676 63.158 0.00 0.00 0.00 4.85
2806 3476 1.002134 CCCCAGCCTACAACACCTG 60.002 63.158 0.00 0.00 0.00 4.00
2807 3477 2.231380 CCCCCAGCCTACAACACCT 61.231 63.158 0.00 0.00 0.00 4.00
2808 3478 1.571773 ATCCCCCAGCCTACAACACC 61.572 60.000 0.00 0.00 0.00 4.16
2809 3479 0.107165 GATCCCCCAGCCTACAACAC 60.107 60.000 0.00 0.00 0.00 3.32
2810 3480 1.622607 CGATCCCCCAGCCTACAACA 61.623 60.000 0.00 0.00 0.00 3.33
2811 3481 1.146263 CGATCCCCCAGCCTACAAC 59.854 63.158 0.00 0.00 0.00 3.32
2812 3482 2.070039 CCGATCCCCCAGCCTACAA 61.070 63.158 0.00 0.00 0.00 2.41
2813 3483 2.445845 CCGATCCCCCAGCCTACA 60.446 66.667 0.00 0.00 0.00 2.74
2814 3484 3.242291 CCCGATCCCCCAGCCTAC 61.242 72.222 0.00 0.00 0.00 3.18
2815 3485 3.444417 TCCCGATCCCCCAGCCTA 61.444 66.667 0.00 0.00 0.00 3.93
2816 3486 4.888325 CTCCCGATCCCCCAGCCT 62.888 72.222 0.00 0.00 0.00 4.58
2818 3488 4.880426 TCCTCCCGATCCCCCAGC 62.880 72.222 0.00 0.00 0.00 4.85
2819 3489 2.525381 CTCCTCCCGATCCCCCAG 60.525 72.222 0.00 0.00 0.00 4.45
2820 3490 4.172232 CCTCCTCCCGATCCCCCA 62.172 72.222 0.00 0.00 0.00 4.96
2821 3491 3.406113 TTCCTCCTCCCGATCCCCC 62.406 68.421 0.00 0.00 0.00 5.40
2822 3492 1.839296 CTTCCTCCTCCCGATCCCC 60.839 68.421 0.00 0.00 0.00 4.81
2823 3493 0.398664 TTCTTCCTCCTCCCGATCCC 60.399 60.000 0.00 0.00 0.00 3.85
2824 3494 1.044611 CTTCTTCCTCCTCCCGATCC 58.955 60.000 0.00 0.00 0.00 3.36
2825 3495 1.044611 CCTTCTTCCTCCTCCCGATC 58.955 60.000 0.00 0.00 0.00 3.69
2826 3496 0.399233 CCCTTCTTCCTCCTCCCGAT 60.399 60.000 0.00 0.00 0.00 4.18
2827 3497 1.001760 CCCTTCTTCCTCCTCCCGA 59.998 63.158 0.00 0.00 0.00 5.14
2828 3498 1.001760 TCCCTTCTTCCTCCTCCCG 59.998 63.158 0.00 0.00 0.00 5.14
2829 3499 0.692756 CCTCCCTTCTTCCTCCTCCC 60.693 65.000 0.00 0.00 0.00 4.30
2830 3500 0.340208 TCCTCCCTTCTTCCTCCTCC 59.660 60.000 0.00 0.00 0.00 4.30
2831 3501 2.115427 CTTCCTCCCTTCTTCCTCCTC 58.885 57.143 0.00 0.00 0.00 3.71
2832 3502 1.725182 TCTTCCTCCCTTCTTCCTCCT 59.275 52.381 0.00 0.00 0.00 3.69
2833 3503 1.834896 GTCTTCCTCCCTTCTTCCTCC 59.165 57.143 0.00 0.00 0.00 4.30
2834 3504 1.478916 CGTCTTCCTCCCTTCTTCCTC 59.521 57.143 0.00 0.00 0.00 3.71
2835 3505 1.077334 TCGTCTTCCTCCCTTCTTCCT 59.923 52.381 0.00 0.00 0.00 3.36
2836 3506 1.558233 TCGTCTTCCTCCCTTCTTCC 58.442 55.000 0.00 0.00 0.00 3.46
2837 3507 2.761208 TCATCGTCTTCCTCCCTTCTTC 59.239 50.000 0.00 0.00 0.00 2.87
2838 3508 2.821437 TCATCGTCTTCCTCCCTTCTT 58.179 47.619 0.00 0.00 0.00 2.52
2839 3509 2.498078 GTTCATCGTCTTCCTCCCTTCT 59.502 50.000 0.00 0.00 0.00 2.85
2840 3510 2.233922 TGTTCATCGTCTTCCTCCCTTC 59.766 50.000 0.00 0.00 0.00 3.46
2841 3511 2.257207 TGTTCATCGTCTTCCTCCCTT 58.743 47.619 0.00 0.00 0.00 3.95
2842 3512 1.938585 TGTTCATCGTCTTCCTCCCT 58.061 50.000 0.00 0.00 0.00 4.20
2843 3513 2.762535 TTGTTCATCGTCTTCCTCCC 57.237 50.000 0.00 0.00 0.00 4.30
2844 3514 4.116238 GAGATTGTTCATCGTCTTCCTCC 58.884 47.826 0.00 0.00 36.93 4.30
2845 3515 3.794028 CGAGATTGTTCATCGTCTTCCTC 59.206 47.826 0.00 0.00 36.93 3.71
2846 3516 3.444034 TCGAGATTGTTCATCGTCTTCCT 59.556 43.478 0.00 0.00 36.93 3.36
2847 3517 3.770666 TCGAGATTGTTCATCGTCTTCC 58.229 45.455 0.00 0.00 36.93 3.46
2848 3518 5.037385 TGATCGAGATTGTTCATCGTCTTC 58.963 41.667 0.00 0.00 36.93 2.87
2849 3519 4.998788 TGATCGAGATTGTTCATCGTCTT 58.001 39.130 0.00 0.00 36.93 3.01
2850 3520 4.639135 TGATCGAGATTGTTCATCGTCT 57.361 40.909 0.00 0.00 36.93 4.18
2851 3521 5.896922 ATTGATCGAGATTGTTCATCGTC 57.103 39.130 0.00 0.00 36.93 4.20
2852 3522 6.668541 AAATTGATCGAGATTGTTCATCGT 57.331 33.333 0.00 0.00 36.93 3.73
2853 3523 6.412943 CCAAAATTGATCGAGATTGTTCATCG 59.587 38.462 8.79 0.00 36.93 3.84
2854 3524 7.430502 GTCCAAAATTGATCGAGATTGTTCATC 59.569 37.037 8.79 0.00 0.00 2.92
2855 3525 7.253422 GTCCAAAATTGATCGAGATTGTTCAT 58.747 34.615 8.79 0.00 0.00 2.57
2856 3526 6.349280 GGTCCAAAATTGATCGAGATTGTTCA 60.349 38.462 8.79 0.00 0.00 3.18
2857 3527 6.030228 GGTCCAAAATTGATCGAGATTGTTC 58.970 40.000 8.79 0.00 0.00 3.18
2858 3528 5.476599 TGGTCCAAAATTGATCGAGATTGTT 59.523 36.000 0.00 0.00 0.00 2.83
2859 3529 5.009631 TGGTCCAAAATTGATCGAGATTGT 58.990 37.500 0.00 0.00 0.00 2.71
2860 3530 5.565592 TGGTCCAAAATTGATCGAGATTG 57.434 39.130 0.00 4.29 0.00 2.67
2861 3531 6.406177 CCAATGGTCCAAAATTGATCGAGATT 60.406 38.462 0.00 0.00 36.13 2.40
2862 3532 5.068198 CCAATGGTCCAAAATTGATCGAGAT 59.932 40.000 0.00 0.00 36.13 2.75
2863 3533 4.398988 CCAATGGTCCAAAATTGATCGAGA 59.601 41.667 0.00 0.00 36.13 4.04
2864 3534 4.398988 TCCAATGGTCCAAAATTGATCGAG 59.601 41.667 0.00 0.00 36.13 4.04
2865 3535 4.339748 TCCAATGGTCCAAAATTGATCGA 58.660 39.130 0.00 0.00 36.13 3.59
2866 3536 4.717233 TCCAATGGTCCAAAATTGATCG 57.283 40.909 0.00 0.00 36.13 3.69
2867 3537 5.067674 TCGATCCAATGGTCCAAAATTGATC 59.932 40.000 0.00 3.27 36.13 2.92
2868 3538 4.955450 TCGATCCAATGGTCCAAAATTGAT 59.045 37.500 0.00 0.00 36.13 2.57
2869 3539 4.339748 TCGATCCAATGGTCCAAAATTGA 58.660 39.130 0.00 0.00 36.13 2.57
2870 3540 4.717233 TCGATCCAATGGTCCAAAATTG 57.283 40.909 0.00 0.00 34.26 2.32
2871 3541 5.736951 TTTCGATCCAATGGTCCAAAATT 57.263 34.783 0.00 0.00 0.00 1.82
2872 3542 5.937975 ATTTCGATCCAATGGTCCAAAAT 57.062 34.783 0.00 0.00 0.00 1.82
2873 3543 5.736951 AATTTCGATCCAATGGTCCAAAA 57.263 34.783 0.00 0.00 0.00 2.44
2874 3544 5.244851 TCAAATTTCGATCCAATGGTCCAAA 59.755 36.000 0.00 0.00 0.00 3.28
2875 3545 4.769488 TCAAATTTCGATCCAATGGTCCAA 59.231 37.500 0.00 0.00 0.00 3.53
2876 3546 4.339748 TCAAATTTCGATCCAATGGTCCA 58.660 39.130 0.00 0.00 0.00 4.02
2877 3547 4.981806 TCAAATTTCGATCCAATGGTCC 57.018 40.909 0.00 0.00 0.00 4.46
2878 3548 7.264373 ACTATCAAATTTCGATCCAATGGTC 57.736 36.000 0.00 0.00 0.00 4.02
2879 3549 7.339212 TGAACTATCAAATTTCGATCCAATGGT 59.661 33.333 0.00 0.00 30.99 3.55
2880 3550 7.706159 TGAACTATCAAATTTCGATCCAATGG 58.294 34.615 0.00 0.00 30.99 3.16
2921 3591 6.096141 TGTCTATTTGTCAGGTGCTTGAAAAA 59.904 34.615 2.80 2.80 38.34 1.94
2922 3592 5.592282 TGTCTATTTGTCAGGTGCTTGAAAA 59.408 36.000 0.00 0.00 0.00 2.29
2923 3593 5.129634 TGTCTATTTGTCAGGTGCTTGAAA 58.870 37.500 0.00 0.00 0.00 2.69
2924 3594 4.713553 TGTCTATTTGTCAGGTGCTTGAA 58.286 39.130 0.00 0.00 0.00 2.69
2925 3595 4.202357 ACTGTCTATTTGTCAGGTGCTTGA 60.202 41.667 0.00 0.00 36.40 3.02
2926 3596 4.067896 ACTGTCTATTTGTCAGGTGCTTG 58.932 43.478 0.00 0.00 36.40 4.01
2927 3597 4.067896 CACTGTCTATTTGTCAGGTGCTT 58.932 43.478 0.00 0.00 36.40 3.91
2928 3598 3.557898 CCACTGTCTATTTGTCAGGTGCT 60.558 47.826 0.00 0.00 36.40 4.40
2929 3599 2.744202 CCACTGTCTATTTGTCAGGTGC 59.256 50.000 0.00 0.00 36.40 5.01
2930 3600 2.744202 GCCACTGTCTATTTGTCAGGTG 59.256 50.000 0.00 0.00 36.40 4.00
2931 3601 2.612972 CGCCACTGTCTATTTGTCAGGT 60.613 50.000 0.00 0.00 36.40 4.00
2932 3602 2.002586 CGCCACTGTCTATTTGTCAGG 58.997 52.381 0.00 0.00 36.40 3.86
2933 3603 2.002586 CCGCCACTGTCTATTTGTCAG 58.997 52.381 0.00 0.00 37.73 3.51
2934 3604 1.621317 TCCGCCACTGTCTATTTGTCA 59.379 47.619 0.00 0.00 0.00 3.58
2935 3605 2.271800 CTCCGCCACTGTCTATTTGTC 58.728 52.381 0.00 0.00 0.00 3.18
2936 3606 1.066143 CCTCCGCCACTGTCTATTTGT 60.066 52.381 0.00 0.00 0.00 2.83
2937 3607 1.656652 CCTCCGCCACTGTCTATTTG 58.343 55.000 0.00 0.00 0.00 2.32
2938 3608 0.107654 GCCTCCGCCACTGTCTATTT 60.108 55.000 0.00 0.00 0.00 1.40
2939 3609 1.264749 TGCCTCCGCCACTGTCTATT 61.265 55.000 0.00 0.00 0.00 1.73
2940 3610 1.685765 TGCCTCCGCCACTGTCTAT 60.686 57.895 0.00 0.00 0.00 1.98
2941 3611 2.283604 TGCCTCCGCCACTGTCTA 60.284 61.111 0.00 0.00 0.00 2.59
2942 3612 4.008933 GTGCCTCCGCCACTGTCT 62.009 66.667 0.00 0.00 0.00 3.41
2943 3613 4.008933 AGTGCCTCCGCCACTGTC 62.009 66.667 0.00 0.00 0.00 3.51
2944 3614 4.320456 CAGTGCCTCCGCCACTGT 62.320 66.667 12.11 0.00 38.37 3.55
2952 3622 4.729918 CCACCCTGCAGTGCCTCC 62.730 72.222 13.72 0.00 36.38 4.30
2953 3623 4.729918 CCCACCCTGCAGTGCCTC 62.730 72.222 13.72 0.00 36.38 4.70
2972 3642 0.909610 TCACCTGATCTGTGTCCCCC 60.910 60.000 13.35 0.00 35.25 5.40
2973 3643 0.250513 GTCACCTGATCTGTGTCCCC 59.749 60.000 13.35 1.32 35.25 4.81
2974 3644 0.976641 TGTCACCTGATCTGTGTCCC 59.023 55.000 13.35 6.18 35.25 4.46
2975 3645 2.625737 CATGTCACCTGATCTGTGTCC 58.374 52.381 13.35 7.96 35.25 4.02
2976 3646 2.005451 GCATGTCACCTGATCTGTGTC 58.995 52.381 13.35 9.78 35.25 3.67
2977 3647 1.348696 TGCATGTCACCTGATCTGTGT 59.651 47.619 13.35 2.86 35.25 3.72
2978 3648 1.736126 GTGCATGTCACCTGATCTGTG 59.264 52.381 9.00 9.00 39.79 3.66
2979 3649 2.105006 GTGCATGTCACCTGATCTGT 57.895 50.000 8.54 0.00 39.79 3.41
2996 3666 0.040157 CACGGTGACATGCAAAGGTG 60.040 55.000 0.74 0.00 0.00 4.00
2997 3667 0.465460 ACACGGTGACATGCAAAGGT 60.465 50.000 16.29 0.00 0.00 3.50
2998 3668 0.040157 CACACGGTGACATGCAAAGG 60.040 55.000 16.29 0.00 35.23 3.11
2999 3669 0.661187 GCACACGGTGACATGCAAAG 60.661 55.000 16.29 0.00 38.00 2.77
3000 3670 1.358402 GCACACGGTGACATGCAAA 59.642 52.632 16.29 0.00 38.00 3.68
3001 3671 2.551006 GGCACACGGTGACATGCAA 61.551 57.895 16.29 0.00 41.94 4.08
3002 3672 2.956799 AAGGCACACGGTGACATGCA 62.957 55.000 16.29 0.00 45.35 3.96
3003 3673 2.260869 AAGGCACACGGTGACATGC 61.261 57.895 16.29 13.96 45.35 4.06
3004 3674 1.575922 CAAGGCACACGGTGACATG 59.424 57.895 16.29 3.91 45.35 3.21
3005 3675 2.260869 GCAAGGCACACGGTGACAT 61.261 57.895 16.29 0.98 45.35 3.06
3006 3676 2.899838 GCAAGGCACACGGTGACA 60.900 61.111 16.29 0.00 45.35 3.58
3007 3677 4.012895 CGCAAGGCACACGGTGAC 62.013 66.667 16.29 6.26 42.83 3.67
3019 3689 0.173255 ATTTGAATTCGGGCCGCAAG 59.827 50.000 23.83 0.00 0.00 4.01
3020 3690 0.605589 AATTTGAATTCGGGCCGCAA 59.394 45.000 23.83 16.89 0.00 4.85
3021 3691 0.605589 AAATTTGAATTCGGGCCGCA 59.394 45.000 23.83 12.24 0.00 5.69
3022 3692 2.570442 TAAATTTGAATTCGGGCCGC 57.430 45.000 23.83 7.83 0.00 6.53
3023 3693 4.238514 TGTTTAAATTTGAATTCGGGCCG 58.761 39.130 22.51 22.51 0.00 6.13
3024 3694 6.735678 AATGTTTAAATTTGAATTCGGGCC 57.264 33.333 0.00 0.00 0.00 5.80
3025 3695 7.273815 TCGTAATGTTTAAATTTGAATTCGGGC 59.726 33.333 0.00 0.00 0.00 6.13
3026 3696 8.676454 TCGTAATGTTTAAATTTGAATTCGGG 57.324 30.769 0.00 0.00 0.00 5.14
3064 3734 4.449743 GTGCTGTGAACATGCATGATTTTT 59.550 37.500 32.75 16.45 39.00 1.94
3065 3735 3.991773 GTGCTGTGAACATGCATGATTTT 59.008 39.130 32.75 16.83 39.00 1.82
3066 3736 3.006003 TGTGCTGTGAACATGCATGATTT 59.994 39.130 32.75 17.59 39.00 2.17
3067 3737 2.559231 TGTGCTGTGAACATGCATGATT 59.441 40.909 32.75 21.39 39.00 2.57
3068 3738 2.164338 TGTGCTGTGAACATGCATGAT 58.836 42.857 32.75 22.02 39.00 2.45
3069 3739 1.606903 TGTGCTGTGAACATGCATGA 58.393 45.000 32.75 8.19 39.00 3.07
3070 3740 2.647529 ATGTGCTGTGAACATGCATG 57.352 45.000 25.09 25.09 36.89 4.06
3071 3741 4.994907 AATATGTGCTGTGAACATGCAT 57.005 36.364 0.00 0.00 38.67 3.96
3072 3742 5.647225 TCTTAATATGTGCTGTGAACATGCA 59.353 36.000 1.67 0.00 38.67 3.96
3073 3743 6.122850 TCTTAATATGTGCTGTGAACATGC 57.877 37.500 1.67 0.00 38.67 4.06
3074 3744 9.655769 GTTATCTTAATATGTGCTGTGAACATG 57.344 33.333 1.67 0.00 38.67 3.21
3075 3745 8.840321 GGTTATCTTAATATGTGCTGTGAACAT 58.160 33.333 0.00 0.00 41.14 2.71
3076 3746 7.282224 GGGTTATCTTAATATGTGCTGTGAACA 59.718 37.037 0.00 0.00 0.00 3.18
3077 3747 7.255139 GGGGTTATCTTAATATGTGCTGTGAAC 60.255 40.741 0.00 0.00 0.00 3.18
3078 3748 6.770785 GGGGTTATCTTAATATGTGCTGTGAA 59.229 38.462 0.00 0.00 0.00 3.18
3079 3749 6.101150 AGGGGTTATCTTAATATGTGCTGTGA 59.899 38.462 0.00 0.00 0.00 3.58
3080 3750 6.299141 AGGGGTTATCTTAATATGTGCTGTG 58.701 40.000 0.00 0.00 0.00 3.66
3081 3751 6.101150 TGAGGGGTTATCTTAATATGTGCTGT 59.899 38.462 0.00 0.00 0.00 4.40
3082 3752 6.533730 TGAGGGGTTATCTTAATATGTGCTG 58.466 40.000 0.00 0.00 0.00 4.41
3083 3753 6.763715 TGAGGGGTTATCTTAATATGTGCT 57.236 37.500 0.00 0.00 0.00 4.40
3084 3754 7.817418 TTTGAGGGGTTATCTTAATATGTGC 57.183 36.000 0.00 0.00 0.00 4.57
3090 3760 9.768215 TCTGAATTTTTGAGGGGTTATCTTAAT 57.232 29.630 0.00 0.00 0.00 1.40
3091 3761 9.768215 ATCTGAATTTTTGAGGGGTTATCTTAA 57.232 29.630 0.00 0.00 0.00 1.85
3092 3762 9.408648 GATCTGAATTTTTGAGGGGTTATCTTA 57.591 33.333 0.00 0.00 0.00 2.10
3093 3763 7.895429 TGATCTGAATTTTTGAGGGGTTATCTT 59.105 33.333 0.00 0.00 0.00 2.40
3094 3764 7.413446 TGATCTGAATTTTTGAGGGGTTATCT 58.587 34.615 0.00 0.00 0.00 1.98
3095 3765 7.645058 TGATCTGAATTTTTGAGGGGTTATC 57.355 36.000 0.00 0.00 0.00 1.75
3096 3766 8.434589 TTTGATCTGAATTTTTGAGGGGTTAT 57.565 30.769 0.00 0.00 0.00 1.89
3097 3767 7.847711 TTTGATCTGAATTTTTGAGGGGTTA 57.152 32.000 0.00 0.00 0.00 2.85
3098 3768 6.745794 TTTGATCTGAATTTTTGAGGGGTT 57.254 33.333 0.00 0.00 0.00 4.11
3099 3769 6.745794 TTTTGATCTGAATTTTTGAGGGGT 57.254 33.333 0.00 0.00 0.00 4.95
3100 3770 7.063780 CGAATTTTGATCTGAATTTTTGAGGGG 59.936 37.037 7.85 0.00 0.00 4.79
3101 3771 7.814107 TCGAATTTTGATCTGAATTTTTGAGGG 59.186 33.333 7.85 0.00 0.00 4.30
3102 3772 8.746922 TCGAATTTTGATCTGAATTTTTGAGG 57.253 30.769 7.85 0.00 0.00 3.86
3111 3781 9.773328 GATGTATGTTTCGAATTTTGATCTGAA 57.227 29.630 0.00 0.00 0.00 3.02
3112 3782 8.116136 CGATGTATGTTTCGAATTTTGATCTGA 58.884 33.333 0.00 0.00 37.55 3.27
3113 3783 8.116136 TCGATGTATGTTTCGAATTTTGATCTG 58.884 33.333 0.00 0.00 41.06 2.90
3114 3784 8.196802 TCGATGTATGTTTCGAATTTTGATCT 57.803 30.769 0.00 0.00 41.06 2.75
3115 3785 8.328146 TCTCGATGTATGTTTCGAATTTTGATC 58.672 33.333 0.00 0.00 43.14 2.92
3116 3786 8.196802 TCTCGATGTATGTTTCGAATTTTGAT 57.803 30.769 0.00 0.00 43.14 2.57
3117 3787 7.589574 TCTCGATGTATGTTTCGAATTTTGA 57.410 32.000 0.00 0.00 43.14 2.69
3118 3788 7.045354 GCTTCTCGATGTATGTTTCGAATTTTG 60.045 37.037 0.00 0.00 43.14 2.44
3119 3789 6.961554 GCTTCTCGATGTATGTTTCGAATTTT 59.038 34.615 0.00 0.00 43.14 1.82
3120 3790 6.092122 TGCTTCTCGATGTATGTTTCGAATTT 59.908 34.615 0.00 0.00 43.14 1.82
3121 3791 5.580691 TGCTTCTCGATGTATGTTTCGAATT 59.419 36.000 0.00 0.00 43.14 2.17
3122 3792 5.109210 TGCTTCTCGATGTATGTTTCGAAT 58.891 37.500 0.00 0.00 43.14 3.34
3123 3793 4.490743 TGCTTCTCGATGTATGTTTCGAA 58.509 39.130 0.00 0.00 43.14 3.71
3124 3794 4.104696 TGCTTCTCGATGTATGTTTCGA 57.895 40.909 0.00 0.00 41.70 3.71
3125 3795 4.840401 TTGCTTCTCGATGTATGTTTCG 57.160 40.909 0.00 0.00 36.72 3.46
3149 3819 8.554528 CGCAACTATTCATGACATATTTCTCTT 58.445 33.333 0.00 0.00 0.00 2.85
3150 3820 7.928167 TCGCAACTATTCATGACATATTTCTCT 59.072 33.333 0.00 0.00 0.00 3.10
3151 3821 8.076714 TCGCAACTATTCATGACATATTTCTC 57.923 34.615 0.00 0.00 0.00 2.87
3152 3822 8.437360 TTCGCAACTATTCATGACATATTTCT 57.563 30.769 0.00 0.00 0.00 2.52
3155 3825 9.494271 ACTATTCGCAACTATTCATGACATATT 57.506 29.630 0.00 0.00 0.00 1.28
3156 3826 9.494271 AACTATTCGCAACTATTCATGACATAT 57.506 29.630 0.00 0.00 0.00 1.78
3157 3827 8.887036 AACTATTCGCAACTATTCATGACATA 57.113 30.769 0.00 0.00 0.00 2.29
3158 3828 7.712639 AGAACTATTCGCAACTATTCATGACAT 59.287 33.333 0.00 0.00 34.02 3.06
3159 3829 7.041721 AGAACTATTCGCAACTATTCATGACA 58.958 34.615 0.00 0.00 34.02 3.58
3160 3830 7.436673 AGAGAACTATTCGCAACTATTCATGAC 59.563 37.037 0.00 0.00 34.02 3.06
3161 3831 7.436376 CAGAGAACTATTCGCAACTATTCATGA 59.564 37.037 0.00 0.00 34.02 3.07
3162 3832 7.223582 ACAGAGAACTATTCGCAACTATTCATG 59.776 37.037 0.00 0.00 34.02 3.07
3163 3833 7.268586 ACAGAGAACTATTCGCAACTATTCAT 58.731 34.615 0.00 0.00 34.02 2.57
3164 3834 6.631016 ACAGAGAACTATTCGCAACTATTCA 58.369 36.000 0.00 0.00 34.02 2.57
3165 3835 8.804688 ATACAGAGAACTATTCGCAACTATTC 57.195 34.615 0.00 0.00 34.02 1.75
3166 3836 9.680315 GTATACAGAGAACTATTCGCAACTATT 57.320 33.333 0.00 0.00 34.02 1.73
3167 3837 9.069082 AGTATACAGAGAACTATTCGCAACTAT 57.931 33.333 5.50 0.00 34.02 2.12
3168 3838 8.447924 AGTATACAGAGAACTATTCGCAACTA 57.552 34.615 5.50 0.00 34.02 2.24
3169 3839 7.336161 AGTATACAGAGAACTATTCGCAACT 57.664 36.000 5.50 0.00 34.02 3.16
3170 3840 9.680315 AATAGTATACAGAGAACTATTCGCAAC 57.320 33.333 5.50 0.00 40.64 4.17
3171 3841 9.894783 GAATAGTATACAGAGAACTATTCGCAA 57.105 33.333 14.98 0.00 45.72 4.85
3179 3849 9.634021 TCAGATGTGAATAGTATACAGAGAACT 57.366 33.333 5.50 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.