Multiple sequence alignment - TraesCS5A01G279100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G279100 chr5A 100.000 3536 0 0 1 3536 488253808 488257343 0.000000e+00 6530.0
1 TraesCS5A01G279100 chr5A 86.809 470 52 8 2072 2537 488316357 488315894 1.880000e-142 516.0
2 TraesCS5A01G279100 chr5A 84.750 400 41 14 978 1364 676106599 676106991 1.990000e-102 383.0
3 TraesCS5A01G279100 chr5D 91.347 913 42 18 2056 2939 386647020 386647924 0.000000e+00 1214.0
4 TraesCS5A01G279100 chr5D 88.584 911 56 29 715 1616 386645603 386646474 0.000000e+00 1062.0
5 TraesCS5A01G279100 chr5D 92.342 444 29 4 1611 2052 386646498 386646938 8.330000e-176 627.0
6 TraesCS5A01G279100 chr5D 87.207 469 48 8 2072 2537 386687538 386687079 1.120000e-144 523.0
7 TraesCS5A01G279100 chr5D 95.135 185 9 0 3115 3299 386648096 386648280 3.450000e-75 292.0
8 TraesCS5A01G279100 chr5D 90.476 42 4 0 3062 3103 510098746 510098787 4.930000e-04 56.5
9 TraesCS5A01G279100 chr5B 90.663 814 61 12 2052 2860 464322107 464322910 0.000000e+00 1068.0
10 TraesCS5A01G279100 chr5B 92.397 605 17 15 710 1294 464320420 464321015 0.000000e+00 835.0
11 TraesCS5A01G279100 chr5B 86.076 474 52 8 2072 2537 464364735 464364268 6.820000e-137 497.0
12 TraesCS5A01G279100 chr5B 89.683 252 19 3 3290 3536 464323047 464323296 7.370000e-82 315.0
13 TraesCS5A01G279100 chr5B 90.047 211 7 6 710 915 464316379 464316580 9.740000e-66 261.0
14 TraesCS5A01G279100 chr5B 90.047 211 7 8 710 915 464317726 464317927 9.740000e-66 261.0
15 TraesCS5A01G279100 chr5B 90.047 211 7 6 710 915 464319073 464319274 9.740000e-66 261.0
16 TraesCS5A01G279100 chr5B 85.714 231 24 4 193 418 464316693 464316919 5.900000e-58 235.0
17 TraesCS5A01G279100 chr5B 85.714 231 24 4 193 418 464318040 464318266 5.900000e-58 235.0
18 TraesCS5A01G279100 chr5B 85.714 231 24 4 193 418 464319387 464319613 5.900000e-58 235.0
19 TraesCS5A01G279100 chr5B 85.281 231 25 4 193 418 464315348 464315574 2.750000e-56 230.0
20 TraesCS5A01G279100 chr5B 84.914 232 25 5 193 418 464314001 464314228 3.550000e-55 226.0
21 TraesCS5A01G279100 chr5B 90.698 86 8 0 3160 3245 464322960 464323045 8.020000e-22 115.0
22 TraesCS5A01G279100 chr7D 88.221 399 32 11 977 1364 597714893 597714499 2.490000e-126 462.0
23 TraesCS5A01G279100 chr7D 87.970 399 32 12 977 1364 597736539 597736146 1.160000e-124 457.0
24 TraesCS5A01G279100 chr7D 93.085 188 13 0 2098 2285 232497317 232497130 3.480000e-70 276.0
25 TraesCS5A01G279100 chr7D 91.758 182 15 0 2104 2285 230994998 230995179 1.630000e-63 254.0
26 TraesCS5A01G279100 chr7D 87.413 143 17 1 2394 2535 232497058 232496916 2.820000e-36 163.0
27 TraesCS5A01G279100 chr3D 85.714 399 37 15 977 1364 558114045 558113656 1.530000e-108 403.0
28 TraesCS5A01G279100 chr7A 85.500 400 40 13 977 1364 98531256 98530863 5.500000e-108 401.0
29 TraesCS5A01G279100 chr7A 85.287 401 39 15 977 1364 475501381 475501774 2.560000e-106 396.0
30 TraesCS5A01G279100 chr7A 94.149 188 11 0 2098 2285 244670920 244670733 1.610000e-73 287.0
31 TraesCS5A01G279100 chr7A 89.510 143 14 1 2394 2535 244670661 244670519 2.800000e-41 180.0
32 TraesCS5A01G279100 chr7A 89.610 77 8 0 2831 2907 71659424 71659348 8.080000e-17 99.0
33 TraesCS5A01G279100 chr1A 85.500 400 40 13 977 1364 125363008 125363401 5.500000e-108 401.0
34 TraesCS5A01G279100 chr1A 85.213 399 43 11 977 1364 100596048 100595655 2.560000e-106 396.0
35 TraesCS5A01G279100 chr1A 85.250 400 41 13 977 1364 413415082 413414689 2.560000e-106 396.0
36 TraesCS5A01G279100 chr7B 94.149 188 11 0 2098 2285 203280557 203280370 1.610000e-73 287.0
37 TraesCS5A01G279100 chr7B 88.112 143 16 1 2394 2535 203280113 203279971 6.070000e-38 169.0
38 TraesCS5A01G279100 chr7B 92.308 39 2 1 3062 3100 374246118 374246155 2.000000e-03 54.7
39 TraesCS5A01G279100 chr7B 90.476 42 3 1 3062 3103 633410710 633410670 2.000000e-03 54.7
40 TraesCS5A01G279100 chrUn 92.857 42 2 1 3062 3103 12884496 12884456 3.810000e-05 60.2
41 TraesCS5A01G279100 chr3B 92.857 42 2 1 3062 3103 550355156 550355196 3.810000e-05 60.2
42 TraesCS5A01G279100 chr4A 92.683 41 2 1 3062 3102 628389874 628389913 1.370000e-04 58.4
43 TraesCS5A01G279100 chr1B 92.308 39 3 0 3062 3100 552311426 552311464 4.930000e-04 56.5
44 TraesCS5A01G279100 chr1D 100.000 29 0 0 3062 3090 389598128 389598156 2.000000e-03 54.7
45 TraesCS5A01G279100 chr4D 90.244 41 3 1 3062 3102 386992801 386992762 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G279100 chr5A 488253808 488257343 3535 False 6530.000000 6530 100.000000 1 3536 1 chr5A.!!$F1 3535
1 TraesCS5A01G279100 chr5D 386645603 386648280 2677 False 798.750000 1214 91.852000 715 3299 4 chr5D.!!$F2 2584
2 TraesCS5A01G279100 chr5B 464314001 464323296 9295 False 356.416667 1068 88.409917 193 3536 12 chr5B.!!$F1 3343
3 TraesCS5A01G279100 chr7B 203279971 203280557 586 True 228.000000 287 91.130500 2098 2535 2 chr7B.!!$R2 437

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
627 4531 0.038983 TCACCGAGCGAATGAACGAA 60.039 50.0 0.0 0.0 35.09 3.85 F
690 5073 0.112606 TTCAGGGACGAGAGACACCT 59.887 55.0 0.0 0.0 33.69 4.00 F
706 5089 0.320247 ACCTTCTGTCTCGCAGCAAG 60.320 55.0 0.0 0.0 44.66 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2481 8805 0.250124 TGTTGGTGACCACGACATCC 60.250 55.0 2.46 0.00 30.78 3.51 R
2484 8808 1.092921 GCTTGTTGGTGACCACGACA 61.093 55.0 2.46 4.03 30.78 4.35 R
2690 9014 0.938008 TGCGTAATTCAACACGTGCA 59.062 45.0 17.22 0.00 40.25 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 5.045012 ACATATGATCCAACATGAGCAGT 57.955 39.130 10.38 0.00 33.61 4.40
29 30 4.978083 ATGATCCAACATGAGCAGTTTC 57.022 40.909 0.00 0.00 33.61 2.78
30 31 3.084039 TGATCCAACATGAGCAGTTTCC 58.916 45.455 0.00 0.00 0.00 3.13
32 33 3.159213 TCCAACATGAGCAGTTTCCAT 57.841 42.857 0.00 0.00 0.00 3.41
34 35 2.821378 CCAACATGAGCAGTTTCCATCA 59.179 45.455 0.00 0.00 0.00 3.07
35 36 3.366679 CCAACATGAGCAGTTTCCATCAC 60.367 47.826 0.00 0.00 0.00 3.06
37 38 3.759581 ACATGAGCAGTTTCCATCACTT 58.240 40.909 0.00 0.00 0.00 3.16
38 39 4.910195 ACATGAGCAGTTTCCATCACTTA 58.090 39.130 0.00 0.00 0.00 2.24
39 40 5.503927 ACATGAGCAGTTTCCATCACTTAT 58.496 37.500 0.00 0.00 0.00 1.73
40 41 5.356190 ACATGAGCAGTTTCCATCACTTATG 59.644 40.000 0.00 0.00 35.15 1.90
41 42 4.910195 TGAGCAGTTTCCATCACTTATGT 58.090 39.130 0.00 0.00 33.34 2.29
42 43 5.316167 TGAGCAGTTTCCATCACTTATGTT 58.684 37.500 0.00 0.00 33.34 2.71
43 44 5.181811 TGAGCAGTTTCCATCACTTATGTTG 59.818 40.000 0.00 0.00 33.34 3.33
44 45 5.072741 AGCAGTTTCCATCACTTATGTTGT 58.927 37.500 0.00 0.00 33.34 3.32
45 46 5.182001 AGCAGTTTCCATCACTTATGTTGTC 59.818 40.000 0.00 0.00 33.34 3.18
46 47 5.619981 GCAGTTTCCATCACTTATGTTGTCC 60.620 44.000 0.00 0.00 33.34 4.02
47 48 5.707298 CAGTTTCCATCACTTATGTTGTCCT 59.293 40.000 0.00 0.00 33.34 3.85
48 49 6.878923 CAGTTTCCATCACTTATGTTGTCCTA 59.121 38.462 0.00 0.00 33.34 2.94
49 50 7.065085 CAGTTTCCATCACTTATGTTGTCCTAG 59.935 40.741 0.00 0.00 33.34 3.02
50 51 5.023533 TCCATCACTTATGTTGTCCTAGC 57.976 43.478 0.00 0.00 33.34 3.42
51 52 4.716784 TCCATCACTTATGTTGTCCTAGCT 59.283 41.667 0.00 0.00 33.34 3.32
53 54 5.525378 CCATCACTTATGTTGTCCTAGCTTC 59.475 44.000 0.00 0.00 33.34 3.86
58 59 7.500892 TCACTTATGTTGTCCTAGCTTCAAAAA 59.499 33.333 0.00 0.00 0.00 1.94
59 60 7.805071 CACTTATGTTGTCCTAGCTTCAAAAAG 59.195 37.037 0.00 1.93 35.47 2.27
60 61 7.502561 ACTTATGTTGTCCTAGCTTCAAAAAGT 59.497 33.333 0.00 2.47 34.79 2.66
61 62 5.499139 TGTTGTCCTAGCTTCAAAAAGTG 57.501 39.130 0.00 0.00 34.79 3.16
62 63 5.189928 TGTTGTCCTAGCTTCAAAAAGTGA 58.810 37.500 0.00 0.00 34.79 3.41
63 64 5.650266 TGTTGTCCTAGCTTCAAAAAGTGAA 59.350 36.000 0.00 0.00 44.20 3.18
76 77 7.645058 TCAAAAAGTGAAGAAAGAACCATCT 57.355 32.000 0.00 0.00 32.63 2.90
77 78 8.066612 TCAAAAAGTGAAGAAAGAACCATCTT 57.933 30.769 0.00 0.00 39.47 2.40
78 79 8.345224 CAAAAAGTGAAGAAAGAACCATCTTC 57.655 34.615 8.24 8.24 45.19 2.87
86 87 6.983906 AGAAAGAACCATCTTCCAAATTGT 57.016 33.333 0.00 0.00 45.19 2.71
87 88 8.477419 AAGAAAGAACCATCTTCCAAATTGTA 57.523 30.769 0.00 0.00 45.19 2.41
88 89 8.477419 AGAAAGAACCATCTTCCAAATTGTAA 57.523 30.769 0.00 0.00 45.19 2.41
89 90 9.093458 AGAAAGAACCATCTTCCAAATTGTAAT 57.907 29.630 0.00 0.00 45.19 1.89
92 93 8.525290 AGAACCATCTTCCAAATTGTAATAGG 57.475 34.615 0.00 0.00 29.15 2.57
93 94 8.336235 AGAACCATCTTCCAAATTGTAATAGGA 58.664 33.333 0.00 0.00 29.15 2.94
94 95 8.893563 AACCATCTTCCAAATTGTAATAGGAA 57.106 30.769 9.62 9.62 36.92 3.36
97 98 9.754382 CCATCTTCCAAATTGTAATAGGAATTG 57.246 33.333 10.16 10.47 37.69 2.32
110 111 9.696572 TGTAATAGGAATTGTAGAGTGAGTACT 57.303 33.333 0.00 0.00 40.66 2.73
114 115 6.937392 AGGAATTGTAGAGTGAGTACTTTCC 58.063 40.000 0.00 2.13 37.25 3.13
117 118 7.546316 GGAATTGTAGAGTGAGTACTTTCCTTC 59.454 40.741 0.00 0.00 37.25 3.46
122 123 6.487299 AGAGTGAGTACTTTCCTTCTTGTT 57.513 37.500 0.00 0.00 37.25 2.83
123 124 7.598759 AGAGTGAGTACTTTCCTTCTTGTTA 57.401 36.000 0.00 0.00 37.25 2.41
125 126 8.145122 AGAGTGAGTACTTTCCTTCTTGTTAAG 58.855 37.037 0.00 0.00 37.25 1.85
126 127 7.793036 AGTGAGTACTTTCCTTCTTGTTAAGT 58.207 34.615 0.00 0.00 31.66 2.24
128 129 8.890718 GTGAGTACTTTCCTTCTTGTTAAGTTT 58.109 33.333 0.00 0.00 31.94 2.66
129 130 9.457436 TGAGTACTTTCCTTCTTGTTAAGTTTT 57.543 29.630 0.00 0.00 31.94 2.43
133 134 8.757164 ACTTTCCTTCTTGTTAAGTTTTTGTG 57.243 30.769 0.00 0.00 0.00 3.33
134 135 7.330946 ACTTTCCTTCTTGTTAAGTTTTTGTGC 59.669 33.333 0.00 0.00 0.00 4.57
135 136 6.274157 TCCTTCTTGTTAAGTTTTTGTGCA 57.726 33.333 0.00 0.00 0.00 4.57
136 137 6.692486 TCCTTCTTGTTAAGTTTTTGTGCAA 58.308 32.000 0.00 0.00 0.00 4.08
137 138 6.588373 TCCTTCTTGTTAAGTTTTTGTGCAAC 59.412 34.615 0.00 0.00 37.35 4.17
138 139 6.589907 CCTTCTTGTTAAGTTTTTGTGCAACT 59.410 34.615 0.00 0.00 38.04 3.16
139 140 7.117667 CCTTCTTGTTAAGTTTTTGTGCAACTT 59.882 33.333 6.04 6.04 44.78 2.66
141 142 7.148641 TCTTGTTAAGTTTTTGTGCAACTTCA 58.851 30.769 4.04 0.00 42.33 3.02
142 143 7.653713 TCTTGTTAAGTTTTTGTGCAACTTCAA 59.346 29.630 4.04 3.81 42.33 2.69
143 144 7.344910 TGTTAAGTTTTTGTGCAACTTCAAG 57.655 32.000 4.04 0.00 42.33 3.02
144 145 4.926860 AAGTTTTTGTGCAACTTCAAGC 57.073 36.364 0.00 0.00 39.79 4.01
146 147 4.506758 AGTTTTTGTGCAACTTCAAGCAT 58.493 34.783 0.00 0.00 43.44 3.79
147 148 4.937015 AGTTTTTGTGCAACTTCAAGCATT 59.063 33.333 0.00 0.00 43.44 3.56
148 149 4.861389 TTTTGTGCAACTTCAAGCATTG 57.139 36.364 0.00 0.00 43.31 2.82
153 154 1.269936 GCAACTTCAAGCATTGCAGGT 60.270 47.619 11.91 0.00 40.79 4.00
155 156 3.367703 GCAACTTCAAGCATTGCAGGTAT 60.368 43.478 11.91 0.00 37.09 2.73
156 157 4.142403 GCAACTTCAAGCATTGCAGGTATA 60.142 41.667 11.91 0.00 37.09 1.47
157 158 5.622007 GCAACTTCAAGCATTGCAGGTATAA 60.622 40.000 11.91 0.00 37.09 0.98
160 161 7.221452 CAACTTCAAGCATTGCAGGTATAATTC 59.779 37.037 11.91 0.00 37.09 2.17
161 162 7.631377 AACTTCAAGCATTGCAGGTATAATTCC 60.631 37.037 11.91 0.00 37.55 3.01
163 164 5.766222 CAAGCATTGCAGGTATAATTCCTC 58.234 41.667 11.91 0.00 40.39 3.71
164 165 5.052693 AGCATTGCAGGTATAATTCCTCA 57.947 39.130 11.91 0.00 32.37 3.86
166 167 5.893255 AGCATTGCAGGTATAATTCCTCAAA 59.107 36.000 11.91 0.00 32.37 2.69
167 168 6.380846 AGCATTGCAGGTATAATTCCTCAAAA 59.619 34.615 11.91 0.00 32.37 2.44
168 169 6.698766 GCATTGCAGGTATAATTCCTCAAAAG 59.301 38.462 3.15 0.00 32.37 2.27
170 171 8.636213 CATTGCAGGTATAATTCCTCAAAAGAT 58.364 33.333 0.00 0.00 32.37 2.40
172 173 8.908786 TGCAGGTATAATTCCTCAAAAGATAG 57.091 34.615 0.00 0.00 32.37 2.08
173 174 7.445402 TGCAGGTATAATTCCTCAAAAGATAGC 59.555 37.037 0.00 0.00 32.37 2.97
174 175 7.094592 GCAGGTATAATTCCTCAAAAGATAGCC 60.095 40.741 0.00 0.00 32.37 3.93
176 177 7.016268 AGGTATAATTCCTCAAAAGATAGCCGA 59.984 37.037 0.00 0.00 0.00 5.54
179 180 4.753516 TTCCTCAAAAGATAGCCGATGA 57.246 40.909 0.00 0.00 0.00 2.92
180 181 4.327982 TCCTCAAAAGATAGCCGATGAG 57.672 45.455 0.00 0.00 35.28 2.90
181 182 2.805099 CCTCAAAAGATAGCCGATGAGC 59.195 50.000 0.00 0.00 34.42 4.26
183 184 4.063689 CTCAAAAGATAGCCGATGAGCAT 58.936 43.478 0.00 0.00 34.23 3.79
184 185 4.454678 TCAAAAGATAGCCGATGAGCATT 58.545 39.130 0.00 0.00 34.23 3.56
185 186 4.883585 TCAAAAGATAGCCGATGAGCATTT 59.116 37.500 0.00 0.00 34.23 2.32
186 187 5.357878 TCAAAAGATAGCCGATGAGCATTTT 59.642 36.000 0.00 0.00 34.23 1.82
188 189 5.429957 AAGATAGCCGATGAGCATTTTTC 57.570 39.130 0.00 0.00 34.23 2.29
190 191 2.927553 AGCCGATGAGCATTTTTCAC 57.072 45.000 0.00 0.00 34.23 3.18
191 192 1.474077 AGCCGATGAGCATTTTTCACC 59.526 47.619 0.00 0.00 34.23 4.02
192 193 1.474077 GCCGATGAGCATTTTTCACCT 59.526 47.619 0.00 0.00 0.00 4.00
194 195 3.316308 GCCGATGAGCATTTTTCACCTAT 59.684 43.478 0.00 0.00 0.00 2.57
195 196 4.790766 GCCGATGAGCATTTTTCACCTATG 60.791 45.833 0.00 0.00 0.00 2.23
196 197 4.576053 CCGATGAGCATTTTTCACCTATGA 59.424 41.667 0.00 0.00 0.00 2.15
203 1359 6.704310 AGCATTTTTCACCTATGAGCATTTT 58.296 32.000 0.00 0.00 35.83 1.82
218 1374 5.105635 TGAGCATTTTTCTCAAAGCATAGGG 60.106 40.000 0.00 0.00 37.61 3.53
224 1380 4.640771 TTCTCAAAGCATAGGGTGAACT 57.359 40.909 0.00 0.00 0.00 3.01
228 1384 5.833131 TCTCAAAGCATAGGGTGAACTTTTT 59.167 36.000 0.00 0.00 0.00 1.94
272 1433 9.314501 GAAAATTCTTTCAGTGACAACGTATAC 57.685 33.333 0.00 0.00 40.67 1.47
273 1434 8.603242 AAATTCTTTCAGTGACAACGTATACT 57.397 30.769 0.56 0.00 0.00 2.12
274 1435 9.701098 AAATTCTTTCAGTGACAACGTATACTA 57.299 29.630 0.56 0.00 0.00 1.82
281 1442 7.992008 TCAGTGACAACGTATACTATCATCAA 58.008 34.615 0.56 0.00 0.00 2.57
283 1444 8.694394 CAGTGACAACGTATACTATCATCAATG 58.306 37.037 0.56 4.61 0.00 2.82
312 2817 7.610865 TGTTCTCTTTTTCTCCATTTTTGTGT 58.389 30.769 0.00 0.00 0.00 3.72
348 2853 8.807581 CATTTCACCTAAAAACACTGAAGTTTC 58.192 33.333 0.00 0.00 40.60 2.78
355 2860 8.134895 CCTAAAAACACTGAAGTTTCTATGCAA 58.865 33.333 0.00 0.00 40.60 4.08
362 2867 7.282224 ACACTGAAGTTTCTATGCAACTACAAA 59.718 33.333 0.00 0.00 33.12 2.83
380 2885 1.784525 AAGAGTTGCACGTAGCTGAC 58.215 50.000 0.00 9.14 45.94 3.51
395 2900 6.896829 GTAGCTGACGAAAATTCTTTCAAC 57.103 37.500 0.00 0.00 40.96 3.18
401 2906 6.255215 TGACGAAAATTCTTTCAACACACTC 58.745 36.000 0.00 0.00 40.96 3.51
416 3598 8.173542 TCAACACACTCTGAAAGTACACTATA 57.826 34.615 0.00 0.00 36.07 1.31
478 3664 8.098220 TGATTCATTGTCTTTGAGAAATCGAA 57.902 30.769 0.00 0.00 0.00 3.71
479 3665 8.567104 TGATTCATTGTCTTTGAGAAATCGAAA 58.433 29.630 0.00 0.00 0.00 3.46
480 3666 8.961294 ATTCATTGTCTTTGAGAAATCGAAAG 57.039 30.769 0.00 0.00 0.00 2.62
548 3734 7.913674 ACAAGATCAAAAGAAAGTAGCTAGG 57.086 36.000 0.00 0.00 0.00 3.02
549 3735 7.680730 ACAAGATCAAAAGAAAGTAGCTAGGA 58.319 34.615 0.00 0.00 0.00 2.94
551 3737 7.726033 AGATCAAAAGAAAGTAGCTAGGAGA 57.274 36.000 0.00 0.00 0.00 3.71
552 3738 8.140112 AGATCAAAAGAAAGTAGCTAGGAGAA 57.860 34.615 0.00 0.00 0.00 2.87
553 3739 8.257306 AGATCAAAAGAAAGTAGCTAGGAGAAG 58.743 37.037 0.00 0.00 0.00 2.85
554 3740 7.540474 TCAAAAGAAAGTAGCTAGGAGAAGA 57.460 36.000 0.00 0.00 0.00 2.87
556 3742 8.429641 TCAAAAGAAAGTAGCTAGGAGAAGAAA 58.570 33.333 0.00 0.00 0.00 2.52
557 3743 9.057089 CAAAAGAAAGTAGCTAGGAGAAGAAAA 57.943 33.333 0.00 0.00 0.00 2.29
558 3744 9.800572 AAAAGAAAGTAGCTAGGAGAAGAAAAT 57.199 29.630 0.00 0.00 0.00 1.82
559 3745 9.443323 AAAGAAAGTAGCTAGGAGAAGAAAATC 57.557 33.333 0.00 0.00 0.00 2.17
561 3747 8.038351 AGAAAGTAGCTAGGAGAAGAAAATCAC 58.962 37.037 0.00 0.00 0.00 3.06
563 3749 7.246171 AGTAGCTAGGAGAAGAAAATCACAA 57.754 36.000 0.00 0.00 0.00 3.33
564 3750 7.680730 AGTAGCTAGGAGAAGAAAATCACAAA 58.319 34.615 0.00 0.00 0.00 2.83
565 3751 8.157476 AGTAGCTAGGAGAAGAAAATCACAAAA 58.843 33.333 0.00 0.00 0.00 2.44
566 3752 7.823745 AGCTAGGAGAAGAAAATCACAAAAA 57.176 32.000 0.00 0.00 0.00 1.94
594 4498 8.632906 AATTGAGACAGAGAAGAAATTCACAT 57.367 30.769 0.00 0.00 0.00 3.21
597 4501 7.219322 TGAGACAGAGAAGAAATTCACATGAA 58.781 34.615 0.00 0.00 38.56 2.57
599 4503 7.448420 AGACAGAGAAGAAATTCACATGAAGA 58.552 34.615 0.00 0.00 37.48 2.87
603 4507 8.566260 CAGAGAAGAAATTCACATGAAGAAACT 58.434 33.333 0.00 2.85 37.48 2.66
607 4511 8.976986 AAGAAATTCACATGAAGAAACTATGC 57.023 30.769 0.00 0.00 37.48 3.14
610 4514 7.692460 AATTCACATGAAGAAACTATGCTCA 57.308 32.000 0.00 0.00 37.48 4.26
613 4517 3.935203 ACATGAAGAAACTATGCTCACCG 59.065 43.478 0.00 0.00 0.00 4.94
614 4518 3.953712 TGAAGAAACTATGCTCACCGA 57.046 42.857 0.00 0.00 0.00 4.69
623 4527 4.185413 GCTCACCGAGCGAATGAA 57.815 55.556 0.00 0.00 45.85 2.57
625 4529 1.991430 CTCACCGAGCGAATGAACG 59.009 57.895 0.00 0.00 0.00 3.95
626 4530 0.456142 CTCACCGAGCGAATGAACGA 60.456 55.000 0.00 0.00 35.09 3.85
627 4531 0.038983 TCACCGAGCGAATGAACGAA 60.039 50.000 0.00 0.00 35.09 3.85
629 4533 1.340465 CCGAGCGAATGAACGAACG 59.660 57.895 0.00 0.00 35.09 3.95
630 4534 1.068832 CCGAGCGAATGAACGAACGA 61.069 55.000 0.14 0.00 36.32 3.85
631 4535 0.706184 CGAGCGAATGAACGAACGAA 59.294 50.000 0.14 0.00 36.32 3.85
632 4536 1.522421 CGAGCGAATGAACGAACGAAC 60.522 52.381 0.14 0.00 36.32 3.95
633 4537 0.433492 AGCGAATGAACGAACGAACG 59.567 50.000 0.14 0.00 39.31 3.95
634 4538 0.431984 GCGAATGAACGAACGAACGA 59.568 50.000 11.97 0.00 37.03 3.85
635 4539 1.522421 GCGAATGAACGAACGAACGAG 60.522 52.381 11.97 0.00 37.03 4.18
636 4540 1.522421 CGAATGAACGAACGAACGAGC 60.522 52.381 11.97 5.03 37.03 5.03
638 4542 0.386352 ATGAACGAACGAACGAGCGA 60.386 50.000 16.11 0.51 37.03 4.93
639 4543 0.591994 TGAACGAACGAACGAGCGAA 60.592 50.000 16.11 3.79 37.03 4.70
640 4544 0.179314 GAACGAACGAACGAGCGAAC 60.179 55.000 16.11 8.52 37.03 3.95
641 4545 1.859047 AACGAACGAACGAGCGAACG 61.859 55.000 16.11 13.26 38.41 3.95
643 4547 1.590855 CGAACGAACGAGCGAACGAA 61.591 55.000 16.11 0.00 36.32 3.85
644 4548 0.499761 GAACGAACGAGCGAACGAAA 59.500 50.000 16.11 0.00 37.03 3.46
645 4549 0.227986 AACGAACGAGCGAACGAAAC 59.772 50.000 16.11 0.09 37.03 2.78
647 4551 1.127225 GAACGAGCGAACGAAACGG 59.873 57.895 8.50 0.00 37.03 4.44
649 4553 4.130281 CGAGCGAACGAAACGGGC 62.130 66.667 0.00 0.00 35.09 6.13
650 4554 2.737376 GAGCGAACGAAACGGGCT 60.737 61.111 0.00 0.00 35.51 5.19
651 4555 3.011760 GAGCGAACGAAACGGGCTG 62.012 63.158 10.13 0.00 33.74 4.85
676 5059 2.808543 CCAAGAGAACCGTTTCTTCAGG 59.191 50.000 0.00 0.00 42.53 3.86
677 5060 2.808543 CAAGAGAACCGTTTCTTCAGGG 59.191 50.000 0.00 0.00 42.53 4.45
678 5061 2.326428 AGAGAACCGTTTCTTCAGGGA 58.674 47.619 0.00 0.00 42.53 4.20
679 5062 2.037381 AGAGAACCGTTTCTTCAGGGAC 59.963 50.000 0.00 0.00 42.53 4.46
682 5065 0.317479 ACCGTTTCTTCAGGGACGAG 59.683 55.000 0.00 0.00 37.69 4.18
684 5067 1.402984 CCGTTTCTTCAGGGACGAGAG 60.403 57.143 0.00 0.00 37.69 3.20
685 5068 1.540267 CGTTTCTTCAGGGACGAGAGA 59.460 52.381 0.00 0.00 37.69 3.10
687 5070 2.287977 TTCTTCAGGGACGAGAGACA 57.712 50.000 0.00 0.00 0.00 3.41
688 5071 1.535833 TCTTCAGGGACGAGAGACAC 58.464 55.000 0.00 0.00 0.00 3.67
689 5072 0.528470 CTTCAGGGACGAGAGACACC 59.472 60.000 0.00 0.00 0.00 4.16
690 5073 0.112606 TTCAGGGACGAGAGACACCT 59.887 55.000 0.00 0.00 33.69 4.00
693 5076 0.406361 AGGGACGAGAGACACCTTCT 59.594 55.000 0.00 0.00 37.23 2.85
694 5077 0.528470 GGGACGAGAGACACCTTCTG 59.472 60.000 0.00 0.00 33.22 3.02
695 5078 1.249407 GGACGAGAGACACCTTCTGT 58.751 55.000 0.00 0.00 33.22 3.41
702 5085 3.114558 GACACCTTCTGTCTCGCAG 57.885 57.895 0.00 0.00 45.38 5.18
703 5086 1.005630 ACACCTTCTGTCTCGCAGC 60.006 57.895 0.00 0.00 44.66 5.25
704 5087 1.005748 CACCTTCTGTCTCGCAGCA 60.006 57.895 0.00 0.00 44.66 4.41
705 5088 0.601046 CACCTTCTGTCTCGCAGCAA 60.601 55.000 0.00 0.00 44.66 3.91
706 5089 0.320247 ACCTTCTGTCTCGCAGCAAG 60.320 55.000 0.00 0.00 44.66 4.01
707 5090 1.633852 CCTTCTGTCTCGCAGCAAGC 61.634 60.000 0.00 0.00 44.66 4.01
920 6648 0.391263 CGCAGTTCTCCCAAGGTACC 60.391 60.000 2.73 2.73 0.00 3.34
923 6651 0.544595 AGTTCTCCCAAGGTACCGCT 60.545 55.000 6.18 0.00 0.00 5.52
1102 6830 3.787394 TCAAGGTGAGACCCCGAC 58.213 61.111 0.00 0.00 39.75 4.79
1104 6832 2.995574 AAGGTGAGACCCCGACCG 60.996 66.667 0.00 0.00 39.75 4.79
1179 6921 5.473273 TCTAGATGGATTACCCTTGGCTTA 58.527 41.667 0.00 0.00 35.38 3.09
1261 7004 7.185318 TCTGGTTTAGATGTCCCGTTAATTA 57.815 36.000 0.00 0.00 0.00 1.40
1265 7008 6.018180 GGTTTAGATGTCCCGTTAATTAGCTG 60.018 42.308 0.00 0.00 0.00 4.24
1300 7043 2.570415 TCGTGGCTACAAAATTGGGA 57.430 45.000 0.00 0.00 0.00 4.37
1303 7046 2.556622 CGTGGCTACAAAATTGGGACTT 59.443 45.455 0.00 0.00 0.00 3.01
1305 7048 3.320826 GTGGCTACAAAATTGGGACTTGT 59.679 43.478 0.00 0.00 37.13 3.16
1311 7062 3.772025 ACAAAATTGGGACTTGTGGTTGA 59.228 39.130 0.00 0.00 32.19 3.18
1316 7067 2.582052 TGGGACTTGTGGTTGATGTTC 58.418 47.619 0.00 0.00 0.00 3.18
1317 7068 2.174639 TGGGACTTGTGGTTGATGTTCT 59.825 45.455 0.00 0.00 0.00 3.01
1322 7073 4.269183 ACTTGTGGTTGATGTTCTGTGAA 58.731 39.130 0.00 0.00 0.00 3.18
1325 7076 4.206375 TGTGGTTGATGTTCTGTGAACAT 58.794 39.130 21.27 21.27 42.98 2.71
1326 7077 4.036616 TGTGGTTGATGTTCTGTGAACATG 59.963 41.667 24.72 0.00 40.62 3.21
1334 7085 1.285280 TCTGTGAACATGGTAGGGGG 58.715 55.000 0.00 0.00 0.00 5.40
1347 7098 2.158490 GGTAGGGGGTGGTTTTGTTGTA 60.158 50.000 0.00 0.00 0.00 2.41
1348 7099 2.850695 AGGGGGTGGTTTTGTTGTAA 57.149 45.000 0.00 0.00 0.00 2.41
1369 7120 8.648557 TGTAAGATGAACTGTAGTATTGCATC 57.351 34.615 0.00 0.00 0.00 3.91
1374 7125 3.887621 ACTGTAGTATTGCATCGTGGT 57.112 42.857 0.00 0.00 0.00 4.16
1375 7126 3.782046 ACTGTAGTATTGCATCGTGGTC 58.218 45.455 0.00 0.00 0.00 4.02
1376 7127 3.194755 ACTGTAGTATTGCATCGTGGTCA 59.805 43.478 0.00 0.00 0.00 4.02
1377 7128 4.141937 ACTGTAGTATTGCATCGTGGTCAT 60.142 41.667 0.00 0.00 0.00 3.06
1378 7129 4.765273 TGTAGTATTGCATCGTGGTCATT 58.235 39.130 0.00 0.00 0.00 2.57
1379 7130 4.808895 TGTAGTATTGCATCGTGGTCATTC 59.191 41.667 0.00 0.00 0.00 2.67
1380 7131 3.872696 AGTATTGCATCGTGGTCATTCA 58.127 40.909 0.00 0.00 0.00 2.57
1381 7132 4.454678 AGTATTGCATCGTGGTCATTCAT 58.545 39.130 0.00 0.00 0.00 2.57
1384 7135 2.709213 TGCATCGTGGTCATTCATTCA 58.291 42.857 0.00 0.00 0.00 2.57
1385 7136 2.419673 TGCATCGTGGTCATTCATTCAC 59.580 45.455 0.00 0.00 0.00 3.18
1389 7140 1.393539 CGTGGTCATTCATTCACGGTC 59.606 52.381 6.79 0.00 46.05 4.79
1414 7165 5.201713 TCTTTTCTGTAGACACCACTGAG 57.798 43.478 0.00 0.00 0.00 3.35
1426 7177 0.532573 CCACTGAGTCGTATGGTGCT 59.467 55.000 0.00 0.00 0.00 4.40
1431 7183 2.683362 CTGAGTCGTATGGTGCTCTGTA 59.317 50.000 0.00 0.00 0.00 2.74
1432 7184 2.683362 TGAGTCGTATGGTGCTCTGTAG 59.317 50.000 0.00 0.00 0.00 2.74
1449 7201 6.036626 GCTCTGTAGTGCTAGAAATTTCCTTC 59.963 42.308 14.61 4.64 0.00 3.46
1479 7233 3.872696 TGTGTTTGTTCTTGAGAGCTCA 58.127 40.909 17.77 0.00 37.91 4.26
1575 7329 2.158943 GGTTGAGCCTAGACATACCACC 60.159 54.545 0.00 0.00 0.00 4.61
1603 7357 1.295101 CAGGCACATGTGACCGGTA 59.705 57.895 28.23 0.00 40.19 4.02
1605 7359 0.321298 AGGCACATGTGACCGGTAAC 60.321 55.000 28.23 15.94 40.19 2.50
1624 7408 1.881973 ACGTGCAGCATGACAAAATCT 59.118 42.857 21.93 0.00 39.69 2.40
1639 7423 6.039270 TGACAAAATCTTGGGTGTTAGACTTG 59.961 38.462 0.00 0.00 36.82 3.16
1640 7424 5.301805 ACAAAATCTTGGGTGTTAGACTTGG 59.698 40.000 0.00 0.00 36.82 3.61
1643 7427 2.637872 TCTTGGGTGTTAGACTTGGGAG 59.362 50.000 0.00 0.00 0.00 4.30
1644 7428 2.409064 TGGGTGTTAGACTTGGGAGA 57.591 50.000 0.00 0.00 0.00 3.71
1645 7429 1.975680 TGGGTGTTAGACTTGGGAGAC 59.024 52.381 0.00 0.00 0.00 3.36
1647 7431 1.617357 GGTGTTAGACTTGGGAGACGT 59.383 52.381 0.00 0.00 0.00 4.34
1648 7432 2.609737 GGTGTTAGACTTGGGAGACGTG 60.610 54.545 0.00 0.00 0.00 4.49
1649 7433 1.000506 TGTTAGACTTGGGAGACGTGC 59.999 52.381 0.00 0.00 0.00 5.34
1650 7434 1.272769 GTTAGACTTGGGAGACGTGCT 59.727 52.381 0.00 0.00 0.00 4.40
1651 7435 0.888619 TAGACTTGGGAGACGTGCTG 59.111 55.000 0.00 0.00 0.00 4.41
1652 7436 2.029844 GACTTGGGAGACGTGCTGC 61.030 63.158 0.00 0.00 0.00 5.25
1655 7439 4.687215 TGGGAGACGTGCTGCTGC 62.687 66.667 8.89 8.89 34.97 5.25
1656 7440 4.385405 GGGAGACGTGCTGCTGCT 62.385 66.667 17.00 0.00 40.48 4.24
1658 7442 3.786586 GAGACGTGCTGCTGCTGC 61.787 66.667 22.51 22.51 40.48 5.25
1729 7513 4.469586 TGAGTCTGGTCTGGTTATGCATAA 59.530 41.667 15.21 15.21 0.00 1.90
1825 7620 1.610363 TTTTATCCTGGCGTGCACAA 58.390 45.000 18.64 0.25 0.00 3.33
1835 7634 3.826221 GTGCACAACACTCCTGCA 58.174 55.556 13.17 0.00 46.41 4.41
1857 7656 5.006649 GCAATGTTTCTGGAAAACAAAGTCC 59.993 40.000 7.36 0.00 42.57 3.85
1899 7751 6.094061 ACGACTCATTTAGCTGAAACTAGTC 58.906 40.000 15.32 15.32 38.06 2.59
1906 7758 3.311486 AGCTGAAACTAGTCTCTGCAC 57.689 47.619 24.57 2.59 38.55 4.57
1936 7816 3.364889 TCTATCTGCGGGTGTTATTCG 57.635 47.619 0.00 0.00 0.00 3.34
2024 8120 8.942338 ATCGACTGTATTAACAACACATATGT 57.058 30.769 1.41 1.41 42.46 2.29
2342 8633 4.662468 TCAGGAGATCTGCAGTTATCAC 57.338 45.455 17.24 11.62 43.06 3.06
2346 8637 5.245751 CAGGAGATCTGCAGTTATCACCTAT 59.754 44.000 24.47 9.63 40.06 2.57
2350 8641 7.313740 AGATCTGCAGTTATCACCTATCATT 57.686 36.000 14.67 0.00 0.00 2.57
2351 8642 7.160049 AGATCTGCAGTTATCACCTATCATTG 58.840 38.462 14.67 0.00 0.00 2.82
2355 8646 6.413892 TGCAGTTATCACCTATCATTGTTCA 58.586 36.000 0.00 0.00 0.00 3.18
2433 8757 1.079197 TGCCGAGATCGCACACAAT 60.079 52.632 0.00 0.00 38.18 2.71
2582 8906 4.171754 GGTTGCTACCTTTGTAGTAGACG 58.828 47.826 10.33 0.00 45.24 4.18
2637 8961 6.535865 GCCATTTTGCAAGATTTCATGTATGA 59.464 34.615 0.00 0.00 34.44 2.15
2640 8964 9.146984 CATTTTGCAAGATTTCATGTATGAACT 57.853 29.630 6.79 2.27 45.63 3.01
2690 9014 5.217978 TGTACTATCTGGTTTTGTCGGTT 57.782 39.130 0.00 0.00 0.00 4.44
2769 9119 3.519579 CTGTGTGTTTTGGTTGATGCAA 58.480 40.909 0.00 0.00 0.00 4.08
2788 9138 4.039004 TGCAATTGCTGTTATTGTTCCTGT 59.961 37.500 29.37 0.00 42.66 4.00
2791 9141 6.089417 GCAATTGCTGTTATTGTTCCTGTAAC 59.911 38.462 23.21 0.00 35.82 2.50
2881 9231 5.240121 CCTGATTTTCAAATTTGGGTCAGG 58.760 41.667 27.58 27.58 35.68 3.86
2883 9233 4.102210 TGATTTTCAAATTTGGGTCAGGCA 59.898 37.500 17.90 5.82 0.00 4.75
2889 9239 1.923356 ATTTGGGTCAGGCAATCGTT 58.077 45.000 0.00 0.00 0.00 3.85
2890 9240 1.698506 TTTGGGTCAGGCAATCGTTT 58.301 45.000 0.00 0.00 0.00 3.60
2891 9241 1.698506 TTGGGTCAGGCAATCGTTTT 58.301 45.000 0.00 0.00 0.00 2.43
2892 9242 1.698506 TGGGTCAGGCAATCGTTTTT 58.301 45.000 0.00 0.00 0.00 1.94
2893 9243 1.339610 TGGGTCAGGCAATCGTTTTTG 59.660 47.619 0.00 0.00 0.00 2.44
2894 9244 1.336795 GGGTCAGGCAATCGTTTTTGG 60.337 52.381 0.00 0.00 0.00 3.28
2902 9252 0.747852 AATCGTTTTTGGCCGTTGGT 59.252 45.000 0.00 0.00 0.00 3.67
2907 9257 0.460987 TTTTTGGCCGTTGGTTGCAG 60.461 50.000 0.00 0.00 0.00 4.41
2910 9260 1.112315 TTGGCCGTTGGTTGCAGATT 61.112 50.000 0.00 0.00 0.00 2.40
2914 9264 1.930371 GCCGTTGGTTGCAGATTGAAC 60.930 52.381 0.00 0.00 0.00 3.18
2926 9276 4.966787 TTGAACGGTGGGCAGCCC 62.967 66.667 25.54 25.54 45.71 5.19
2928 9278 4.660938 GAACGGTGGGCAGCCCTT 62.661 66.667 31.51 17.32 45.70 3.95
2929 9279 4.660938 AACGGTGGGCAGCCCTTC 62.661 66.667 31.51 22.38 45.70 3.46
2931 9281 4.351054 CGGTGGGCAGCCCTTCTT 62.351 66.667 31.51 0.00 45.70 2.52
2932 9282 2.361737 GGTGGGCAGCCCTTCTTC 60.362 66.667 31.51 15.23 45.70 2.87
2933 9283 2.361737 GTGGGCAGCCCTTCTTCC 60.362 66.667 31.51 8.39 45.70 3.46
2934 9284 2.532715 TGGGCAGCCCTTCTTCCT 60.533 61.111 31.51 0.00 45.70 3.36
2935 9285 2.273776 GGGCAGCCCTTCTTCCTC 59.726 66.667 24.99 0.00 41.34 3.71
2936 9286 2.273776 GGCAGCCCTTCTTCCTCC 59.726 66.667 0.00 0.00 0.00 4.30
2937 9287 2.606587 GGCAGCCCTTCTTCCTCCA 61.607 63.158 0.00 0.00 0.00 3.86
2938 9288 1.077858 GCAGCCCTTCTTCCTCCAG 60.078 63.158 0.00 0.00 0.00 3.86
2960 9310 4.408396 TTCCCCAGGCCGCCTCTA 62.408 66.667 9.68 0.00 0.00 2.43
2964 9314 4.232878 CCAGGCCGCCTCTAGCTG 62.233 72.222 9.68 0.00 40.39 4.24
2965 9315 3.150335 CAGGCCGCCTCTAGCTGA 61.150 66.667 9.68 0.00 40.39 4.26
2969 9319 3.922640 CCGCCTCTAGCTGAGCCC 61.923 72.222 0.00 0.00 41.35 5.19
2971 9321 3.151022 GCCTCTAGCTGAGCCCGT 61.151 66.667 0.00 0.00 41.35 5.28
2972 9322 2.811101 CCTCTAGCTGAGCCCGTG 59.189 66.667 0.00 0.00 41.35 4.94
2973 9323 1.754621 CCTCTAGCTGAGCCCGTGA 60.755 63.158 0.00 0.00 41.35 4.35
2974 9324 1.435515 CTCTAGCTGAGCCCGTGAC 59.564 63.158 0.00 0.00 35.84 3.67
2975 9325 2.010582 CTCTAGCTGAGCCCGTGACC 62.011 65.000 0.00 0.00 35.84 4.02
2976 9326 3.417275 CTAGCTGAGCCCGTGACCG 62.417 68.421 0.00 0.00 0.00 4.79
3018 9469 3.072468 CCACCGCTCCCGTCCTAA 61.072 66.667 0.00 0.00 0.00 2.69
3019 9470 2.652095 CCACCGCTCCCGTCCTAAA 61.652 63.158 0.00 0.00 0.00 1.85
3020 9471 1.447314 CACCGCTCCCGTCCTAAAC 60.447 63.158 0.00 0.00 0.00 2.01
3021 9472 2.186125 CCGCTCCCGTCCTAAACC 59.814 66.667 0.00 0.00 0.00 3.27
3022 9473 2.186125 CGCTCCCGTCCTAAACCC 59.814 66.667 0.00 0.00 0.00 4.11
3023 9474 2.356780 CGCTCCCGTCCTAAACCCT 61.357 63.158 0.00 0.00 0.00 4.34
3024 9475 1.039233 CGCTCCCGTCCTAAACCCTA 61.039 60.000 0.00 0.00 0.00 3.53
3025 9476 1.197812 GCTCCCGTCCTAAACCCTAA 58.802 55.000 0.00 0.00 0.00 2.69
3026 9477 1.138464 GCTCCCGTCCTAAACCCTAAG 59.862 57.143 0.00 0.00 0.00 2.18
3027 9478 2.743553 CTCCCGTCCTAAACCCTAAGA 58.256 52.381 0.00 0.00 0.00 2.10
3028 9479 3.306613 CTCCCGTCCTAAACCCTAAGAT 58.693 50.000 0.00 0.00 0.00 2.40
3029 9480 4.477249 CTCCCGTCCTAAACCCTAAGATA 58.523 47.826 0.00 0.00 0.00 1.98
3030 9481 4.477249 TCCCGTCCTAAACCCTAAGATAG 58.523 47.826 0.00 0.00 0.00 2.08
3031 9482 4.168675 TCCCGTCCTAAACCCTAAGATAGA 59.831 45.833 0.00 0.00 0.00 1.98
3032 9483 5.085219 CCCGTCCTAAACCCTAAGATAGAT 58.915 45.833 0.00 0.00 0.00 1.98
3033 9484 6.045931 TCCCGTCCTAAACCCTAAGATAGATA 59.954 42.308 0.00 0.00 0.00 1.98
3034 9485 6.723052 CCCGTCCTAAACCCTAAGATAGATAA 59.277 42.308 0.00 0.00 0.00 1.75
3035 9486 7.399478 CCCGTCCTAAACCCTAAGATAGATAAT 59.601 40.741 0.00 0.00 0.00 1.28
3036 9487 9.471702 CCGTCCTAAACCCTAAGATAGATAATA 57.528 37.037 0.00 0.00 0.00 0.98
3043 9494 6.487299 CCCTAAGATAGATAATAGGGTGGC 57.513 45.833 8.30 0.00 46.37 5.01
3044 9495 6.206042 CCCTAAGATAGATAATAGGGTGGCT 58.794 44.000 8.30 0.00 46.37 4.75
3045 9496 6.325286 CCCTAAGATAGATAATAGGGTGGCTC 59.675 46.154 8.30 0.00 46.37 4.70
3046 9497 7.129425 CCTAAGATAGATAATAGGGTGGCTCT 58.871 42.308 0.00 0.00 32.89 4.09
3047 9498 7.286775 CCTAAGATAGATAATAGGGTGGCTCTC 59.713 44.444 0.00 0.00 32.89 3.20
3048 9499 6.416044 AGATAGATAATAGGGTGGCTCTCT 57.584 41.667 0.00 0.00 0.00 3.10
3049 9500 6.194235 AGATAGATAATAGGGTGGCTCTCTG 58.806 44.000 0.00 0.00 0.00 3.35
3050 9501 3.515562 AGATAATAGGGTGGCTCTCTGG 58.484 50.000 0.00 0.00 0.00 3.86
3051 9502 1.424638 TAATAGGGTGGCTCTCTGGC 58.575 55.000 0.00 0.00 42.18 4.85
3052 9503 0.327000 AATAGGGTGGCTCTCTGGCT 60.327 55.000 0.00 0.00 42.34 4.75
3053 9504 0.762461 ATAGGGTGGCTCTCTGGCTC 60.762 60.000 0.00 0.00 42.34 4.70
3054 9505 4.154347 GGGTGGCTCTCTGGCTCG 62.154 72.222 0.00 0.00 42.34 5.03
3055 9506 4.828925 GGTGGCTCTCTGGCTCGC 62.829 72.222 0.00 0.00 42.34 5.03
3056 9507 3.768922 GTGGCTCTCTGGCTCGCT 61.769 66.667 0.00 0.00 42.34 4.93
3057 9508 3.456365 TGGCTCTCTGGCTCGCTC 61.456 66.667 0.00 0.00 42.34 5.03
3058 9509 4.567385 GGCTCTCTGGCTCGCTCG 62.567 72.222 0.00 0.00 38.32 5.03
3059 9510 4.567385 GCTCTCTGGCTCGCTCGG 62.567 72.222 0.00 0.00 0.00 4.63
3060 9511 3.898509 CTCTCTGGCTCGCTCGGG 61.899 72.222 0.00 0.00 0.00 5.14
3067 9518 3.606662 GCTCGCTCGGGCATCCTA 61.607 66.667 8.62 0.00 42.14 2.94
3068 9519 3.129300 CTCGCTCGGGCATCCTAA 58.871 61.111 8.62 0.00 38.60 2.69
3069 9520 1.441729 CTCGCTCGGGCATCCTAAA 59.558 57.895 8.62 0.00 38.60 1.85
3070 9521 0.876342 CTCGCTCGGGCATCCTAAAC 60.876 60.000 8.62 0.00 38.60 2.01
3071 9522 1.887707 CGCTCGGGCATCCTAAACC 60.888 63.158 8.62 0.00 38.60 3.27
3072 9523 1.526225 GCTCGGGCATCCTAAACCC 60.526 63.158 0.00 0.00 40.51 4.11
3073 9524 1.984288 GCTCGGGCATCCTAAACCCT 61.984 60.000 0.00 0.00 41.86 4.34
3074 9525 1.420430 CTCGGGCATCCTAAACCCTA 58.580 55.000 0.00 0.00 41.86 3.53
3075 9526 1.766496 CTCGGGCATCCTAAACCCTAA 59.234 52.381 0.00 0.00 41.86 2.69
3076 9527 1.766496 TCGGGCATCCTAAACCCTAAG 59.234 52.381 0.00 0.00 41.86 2.18
3077 9528 1.766496 CGGGCATCCTAAACCCTAAGA 59.234 52.381 0.00 0.00 41.86 2.10
3078 9529 2.372172 CGGGCATCCTAAACCCTAAGAT 59.628 50.000 0.00 0.00 41.86 2.40
3079 9530 3.581332 CGGGCATCCTAAACCCTAAGATA 59.419 47.826 0.00 0.00 41.86 1.98
3080 9531 4.322801 CGGGCATCCTAAACCCTAAGATAG 60.323 50.000 0.00 0.00 41.86 2.08
3081 9532 4.844655 GGGCATCCTAAACCCTAAGATAGA 59.155 45.833 0.00 0.00 40.75 1.98
3082 9533 5.489278 GGGCATCCTAAACCCTAAGATAGAT 59.511 44.000 0.00 0.00 40.75 1.98
3083 9534 6.672657 GGGCATCCTAAACCCTAAGATAGATA 59.327 42.308 0.00 0.00 40.75 1.98
3084 9535 7.182206 GGGCATCCTAAACCCTAAGATAGATAA 59.818 40.741 0.00 0.00 40.75 1.75
3085 9536 8.773216 GGCATCCTAAACCCTAAGATAGATAAT 58.227 37.037 0.00 0.00 0.00 1.28
3086 9537 9.606631 GCATCCTAAACCCTAAGATAGATAATG 57.393 37.037 0.00 0.00 0.00 1.90
3088 9539 8.680820 TCCTAAACCCTAAGATAGATAATGGG 57.319 38.462 0.00 0.00 39.06 4.00
3089 9540 7.682890 TCCTAAACCCTAAGATAGATAATGGGG 59.317 40.741 0.00 0.00 37.56 4.96
3090 9541 6.720217 AAACCCTAAGATAGATAATGGGGG 57.280 41.667 0.00 0.00 37.56 5.40
3091 9542 5.385753 ACCCTAAGATAGATAATGGGGGT 57.614 43.478 0.00 0.00 39.55 4.95
3092 9543 5.101529 ACCCTAAGATAGATAATGGGGGTG 58.898 45.833 0.00 0.00 42.31 4.61
3093 9544 4.475016 CCCTAAGATAGATAATGGGGGTGG 59.525 50.000 0.00 0.00 0.00 4.61
3094 9545 4.080299 CCTAAGATAGATAATGGGGGTGGC 60.080 50.000 0.00 0.00 0.00 5.01
3095 9546 3.297994 AGATAGATAATGGGGGTGGCT 57.702 47.619 0.00 0.00 0.00 4.75
3096 9547 3.185455 AGATAGATAATGGGGGTGGCTC 58.815 50.000 0.00 0.00 0.00 4.70
3097 9548 2.815357 TAGATAATGGGGGTGGCTCT 57.185 50.000 0.00 0.00 0.00 4.09
3098 9549 1.439543 AGATAATGGGGGTGGCTCTC 58.560 55.000 0.00 0.00 0.00 3.20
3099 9550 0.402121 GATAATGGGGGTGGCTCTCC 59.598 60.000 0.00 0.00 35.52 3.71
3100 9551 1.418908 ATAATGGGGGTGGCTCTCCG 61.419 60.000 0.00 0.00 37.63 4.63
3106 9557 4.459089 GGTGGCTCTCCGGCTCAC 62.459 72.222 0.00 0.07 39.32 3.51
3107 9558 3.386237 GTGGCTCTCCGGCTCACT 61.386 66.667 0.00 0.00 39.32 3.41
3108 9559 3.071206 TGGCTCTCCGGCTCACTC 61.071 66.667 0.00 0.00 39.32 3.51
3109 9560 4.200283 GGCTCTCCGGCTCACTCG 62.200 72.222 0.00 0.00 34.85 4.18
3111 9562 3.522731 CTCTCCGGCTCACTCGGG 61.523 72.222 0.00 0.00 46.78 5.14
3128 9579 4.253685 CTCGGGCAAACTCTCAAAATAGA 58.746 43.478 0.00 0.00 0.00 1.98
3131 9582 5.046878 TCGGGCAAACTCTCAAAATAGACTA 60.047 40.000 0.00 0.00 0.00 2.59
3132 9583 5.642063 CGGGCAAACTCTCAAAATAGACTAA 59.358 40.000 0.00 0.00 0.00 2.24
3134 9585 6.127980 GGGCAAACTCTCAAAATAGACTAACC 60.128 42.308 0.00 0.00 0.00 2.85
3192 9663 8.174422 GCTAATGTGAAGAAGTTTCAGAGAATC 58.826 37.037 0.00 0.00 0.00 2.52
3235 9706 4.183101 GCCTGAAAGAAGTCTCAGATCAG 58.817 47.826 0.00 0.00 41.38 2.90
3305 9776 8.498054 ACTAATGTTTGAATCGATGACAGATT 57.502 30.769 0.00 5.65 40.63 2.40
3306 9777 8.950210 ACTAATGTTTGAATCGATGACAGATTT 58.050 29.630 0.00 0.58 38.32 2.17
3330 9801 4.922206 TGAATAAAGCACTGGTCTGGAAT 58.078 39.130 0.00 0.00 0.00 3.01
3337 9808 2.292267 CACTGGTCTGGAATATGGTGC 58.708 52.381 0.00 0.00 0.00 5.01
3365 9836 2.676342 ACTCGTCAGTTTTGGTTGTCAC 59.324 45.455 0.00 0.00 0.00 3.67
3368 9839 2.160615 CGTCAGTTTTGGTTGTCACACA 59.839 45.455 0.00 0.00 0.00 3.72
3398 9869 1.239347 GTCTGAACTTTGGCCCTGAC 58.761 55.000 0.00 0.00 0.00 3.51
3402 9873 3.073798 TCTGAACTTTGGCCCTGACATTA 59.926 43.478 0.00 0.00 0.00 1.90
3404 9875 2.215942 ACTTTGGCCCTGACATTACC 57.784 50.000 0.00 0.00 0.00 2.85
3409 9880 0.181350 GGCCCTGACATTACCCTCAG 59.819 60.000 0.00 0.00 34.73 3.35
3418 9889 2.371841 ACATTACCCTCAGCAACACAGA 59.628 45.455 0.00 0.00 0.00 3.41
3424 9895 2.023673 CCTCAGCAACACAGACCAAAA 58.976 47.619 0.00 0.00 0.00 2.44
3434 9905 0.107831 CAGACCAAAACGGGACCAGA 59.892 55.000 0.00 0.00 40.22 3.86
3454 9925 5.507985 CCAGAAAACAAGTGATCCAAACTCC 60.508 44.000 0.00 0.00 0.00 3.85
3464 9935 0.397941 TCCAAACTCCTCAGCCACAG 59.602 55.000 0.00 0.00 0.00 3.66
3465 9936 0.607489 CCAAACTCCTCAGCCACAGG 60.607 60.000 0.00 0.00 0.00 4.00
3494 9967 1.463674 GGAACCACACCATCATCACC 58.536 55.000 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.722728 ACTGCTCATGTTGGATCATATGTTATT 59.277 33.333 1.90 0.00 0.00 1.40
3 4 5.443283 ACTGCTCATGTTGGATCATATGTT 58.557 37.500 1.90 0.00 0.00 2.71
5 6 6.387041 AAACTGCTCATGTTGGATCATATG 57.613 37.500 0.00 0.00 0.00 1.78
6 7 5.533903 GGAAACTGCTCATGTTGGATCATAT 59.466 40.000 0.00 0.00 0.00 1.78
7 8 4.883585 GGAAACTGCTCATGTTGGATCATA 59.116 41.667 0.00 0.00 0.00 2.15
10 11 3.084039 TGGAAACTGCTCATGTTGGATC 58.916 45.455 0.00 0.00 0.00 3.36
11 12 3.159213 TGGAAACTGCTCATGTTGGAT 57.841 42.857 0.00 0.00 0.00 3.41
12 13 2.655090 TGGAAACTGCTCATGTTGGA 57.345 45.000 0.00 0.00 0.00 3.53
13 14 2.821378 TGATGGAAACTGCTCATGTTGG 59.179 45.455 0.00 0.00 0.00 3.77
15 16 3.759581 AGTGATGGAAACTGCTCATGTT 58.240 40.909 0.00 0.00 0.00 2.71
16 17 3.430042 AGTGATGGAAACTGCTCATGT 57.570 42.857 0.00 0.00 0.00 3.21
17 18 5.356190 ACATAAGTGATGGAAACTGCTCATG 59.644 40.000 0.00 0.00 40.18 3.07
19 20 4.910195 ACATAAGTGATGGAAACTGCTCA 58.090 39.130 0.00 0.00 40.18 4.26
21 22 5.072741 ACAACATAAGTGATGGAAACTGCT 58.927 37.500 0.00 0.00 40.18 4.24
22 23 5.376854 ACAACATAAGTGATGGAAACTGC 57.623 39.130 0.00 0.00 40.18 4.40
23 24 5.707298 AGGACAACATAAGTGATGGAAACTG 59.293 40.000 0.00 0.00 40.18 3.16
26 27 5.880332 GCTAGGACAACATAAGTGATGGAAA 59.120 40.000 0.00 0.00 40.18 3.13
29 30 5.028549 AGCTAGGACAACATAAGTGATGG 57.971 43.478 0.00 0.00 40.18 3.51
30 31 6.108687 TGAAGCTAGGACAACATAAGTGATG 58.891 40.000 0.00 0.00 41.79 3.07
32 33 5.738619 TGAAGCTAGGACAACATAAGTGA 57.261 39.130 0.00 0.00 0.00 3.41
34 35 7.502561 ACTTTTTGAAGCTAGGACAACATAAGT 59.497 33.333 0.00 0.36 0.00 2.24
35 36 7.805071 CACTTTTTGAAGCTAGGACAACATAAG 59.195 37.037 0.00 0.00 0.00 1.73
37 38 6.995686 TCACTTTTTGAAGCTAGGACAACATA 59.004 34.615 0.00 0.00 0.00 2.29
38 39 5.827797 TCACTTTTTGAAGCTAGGACAACAT 59.172 36.000 0.00 0.00 0.00 2.71
39 40 5.189928 TCACTTTTTGAAGCTAGGACAACA 58.810 37.500 0.00 0.00 0.00 3.33
40 41 5.751243 TCACTTTTTGAAGCTAGGACAAC 57.249 39.130 0.00 0.00 0.00 3.32
51 52 8.066612 AGATGGTTCTTTCTTCACTTTTTGAA 57.933 30.769 0.00 0.00 42.26 2.69
53 54 7.436376 GGAAGATGGTTCTTTCTTCACTTTTTG 59.564 37.037 13.02 0.00 46.26 2.44
58 59 5.310409 TGGAAGATGGTTCTTTCTTCACT 57.690 39.130 13.02 0.00 46.26 3.41
59 60 6.391227 TTTGGAAGATGGTTCTTTCTTCAC 57.609 37.500 13.02 5.17 46.26 3.18
60 61 7.069826 ACAATTTGGAAGATGGTTCTTTCTTCA 59.930 33.333 13.02 0.00 46.26 3.02
61 62 7.436933 ACAATTTGGAAGATGGTTCTTTCTTC 58.563 34.615 0.78 4.48 42.34 2.87
62 63 7.365497 ACAATTTGGAAGATGGTTCTTTCTT 57.635 32.000 0.78 0.00 42.34 2.52
63 64 6.983906 ACAATTTGGAAGATGGTTCTTTCT 57.016 33.333 0.78 0.00 42.34 2.52
66 67 8.971073 CCTATTACAATTTGGAAGATGGTTCTT 58.029 33.333 0.00 0.00 44.99 2.52
67 68 8.336235 TCCTATTACAATTTGGAAGATGGTTCT 58.664 33.333 0.00 0.00 0.00 3.01
68 69 8.519799 TCCTATTACAATTTGGAAGATGGTTC 57.480 34.615 0.00 0.00 0.00 3.62
69 70 8.893563 TTCCTATTACAATTTGGAAGATGGTT 57.106 30.769 0.00 0.00 33.48 3.67
84 85 9.696572 AGTACTCACTCTACAATTCCTATTACA 57.303 33.333 0.00 0.00 0.00 2.41
88 89 8.697292 GGAAAGTACTCACTCTACAATTCCTAT 58.303 37.037 0.00 0.00 33.62 2.57
89 90 7.894364 AGGAAAGTACTCACTCTACAATTCCTA 59.106 37.037 13.85 0.00 39.03 2.94
90 91 6.726764 AGGAAAGTACTCACTCTACAATTCCT 59.273 38.462 10.88 10.88 37.60 3.36
91 92 6.937392 AGGAAAGTACTCACTCTACAATTCC 58.063 40.000 0.00 1.57 35.06 3.01
92 93 8.308207 AGAAGGAAAGTACTCACTCTACAATTC 58.692 37.037 0.00 0.00 32.29 2.17
93 94 8.196378 AGAAGGAAAGTACTCACTCTACAATT 57.804 34.615 0.00 0.00 32.29 2.32
94 95 7.784470 AGAAGGAAAGTACTCACTCTACAAT 57.216 36.000 0.00 0.00 32.29 2.71
97 98 6.983984 ACAAGAAGGAAAGTACTCACTCTAC 58.016 40.000 0.00 0.00 32.29 2.59
98 99 7.598759 AACAAGAAGGAAAGTACTCACTCTA 57.401 36.000 0.00 0.00 32.29 2.43
99 100 6.487299 AACAAGAAGGAAAGTACTCACTCT 57.513 37.500 0.00 0.00 32.29 3.24
101 102 7.793036 ACTTAACAAGAAGGAAAGTACTCACT 58.207 34.615 0.00 0.00 36.19 3.41
102 103 8.434733 AACTTAACAAGAAGGAAAGTACTCAC 57.565 34.615 0.00 0.00 30.51 3.51
103 104 9.457436 AAAACTTAACAAGAAGGAAAGTACTCA 57.543 29.630 0.00 0.00 30.51 3.41
106 107 9.850628 ACAAAAACTTAACAAGAAGGAAAGTAC 57.149 29.630 0.00 0.00 30.51 2.73
108 109 7.330946 GCACAAAAACTTAACAAGAAGGAAAGT 59.669 33.333 0.00 0.00 31.94 2.66
109 110 7.330700 TGCACAAAAACTTAACAAGAAGGAAAG 59.669 33.333 0.00 0.00 0.00 2.62
110 111 7.155328 TGCACAAAAACTTAACAAGAAGGAAA 58.845 30.769 0.00 0.00 0.00 3.13
112 113 6.274157 TGCACAAAAACTTAACAAGAAGGA 57.726 33.333 0.00 0.00 0.00 3.36
114 115 7.581011 AGTTGCACAAAAACTTAACAAGAAG 57.419 32.000 0.00 0.00 34.16 2.85
117 118 7.344910 TGAAGTTGCACAAAAACTTAACAAG 57.655 32.000 0.79 0.00 45.50 3.16
122 123 5.473931 TGCTTGAAGTTGCACAAAAACTTA 58.526 33.333 0.79 0.00 45.50 2.24
125 126 4.863152 ATGCTTGAAGTTGCACAAAAAC 57.137 36.364 0.00 0.00 42.26 2.43
126 127 4.437121 GCAATGCTTGAAGTTGCACAAAAA 60.437 37.500 13.58 0.00 45.57 1.94
128 129 2.608546 GCAATGCTTGAAGTTGCACAAA 59.391 40.909 13.58 0.00 45.57 2.83
129 130 2.203401 GCAATGCTTGAAGTTGCACAA 58.797 42.857 13.58 0.00 45.57 3.33
130 131 1.855513 GCAATGCTTGAAGTTGCACA 58.144 45.000 13.58 0.00 45.57 4.57
133 134 1.269936 ACCTGCAATGCTTGAAGTTGC 60.270 47.619 6.82 12.07 46.24 4.17
134 135 2.806608 ACCTGCAATGCTTGAAGTTG 57.193 45.000 6.82 0.00 34.27 3.16
135 136 6.780457 ATTATACCTGCAATGCTTGAAGTT 57.220 33.333 6.82 0.00 34.27 2.66
136 137 6.183360 GGAATTATACCTGCAATGCTTGAAGT 60.183 38.462 6.82 0.00 34.27 3.01
137 138 6.040166 AGGAATTATACCTGCAATGCTTGAAG 59.960 38.462 6.82 0.00 36.30 3.02
138 139 5.893255 AGGAATTATACCTGCAATGCTTGAA 59.107 36.000 6.82 0.00 36.30 2.69
139 140 5.448654 AGGAATTATACCTGCAATGCTTGA 58.551 37.500 6.82 0.00 36.30 3.02
141 142 5.448654 TGAGGAATTATACCTGCAATGCTT 58.551 37.500 6.82 0.00 37.93 3.91
142 143 5.052693 TGAGGAATTATACCTGCAATGCT 57.947 39.130 6.82 0.00 37.93 3.79
143 144 5.772825 TTGAGGAATTATACCTGCAATGC 57.227 39.130 0.00 0.00 37.93 3.56
144 145 7.999679 TCTTTTGAGGAATTATACCTGCAATG 58.000 34.615 0.00 0.00 37.93 2.82
146 147 9.342308 CTATCTTTTGAGGAATTATACCTGCAA 57.658 33.333 0.00 0.00 37.93 4.08
147 148 7.445402 GCTATCTTTTGAGGAATTATACCTGCA 59.555 37.037 0.00 0.00 37.93 4.41
148 149 7.094592 GGCTATCTTTTGAGGAATTATACCTGC 60.095 40.741 0.00 0.00 37.93 4.85
149 150 7.118390 CGGCTATCTTTTGAGGAATTATACCTG 59.882 40.741 0.00 0.00 37.93 4.00
150 151 7.016268 TCGGCTATCTTTTGAGGAATTATACCT 59.984 37.037 0.00 0.00 40.80 3.08
151 152 7.159372 TCGGCTATCTTTTGAGGAATTATACC 58.841 38.462 0.00 0.00 0.00 2.73
153 154 8.593679 TCATCGGCTATCTTTTGAGGAATTATA 58.406 33.333 0.00 0.00 0.00 0.98
155 156 6.826668 TCATCGGCTATCTTTTGAGGAATTA 58.173 36.000 0.00 0.00 0.00 1.40
156 157 5.684704 TCATCGGCTATCTTTTGAGGAATT 58.315 37.500 0.00 0.00 0.00 2.17
157 158 5.296151 TCATCGGCTATCTTTTGAGGAAT 57.704 39.130 0.00 0.00 0.00 3.01
160 161 2.805099 GCTCATCGGCTATCTTTTGAGG 59.195 50.000 0.00 0.00 33.02 3.86
161 162 3.461061 TGCTCATCGGCTATCTTTTGAG 58.539 45.455 0.00 0.00 34.98 3.02
163 164 4.825546 AATGCTCATCGGCTATCTTTTG 57.174 40.909 0.00 0.00 0.00 2.44
164 165 5.841957 AAAATGCTCATCGGCTATCTTTT 57.158 34.783 0.00 0.00 0.00 2.27
166 167 4.883585 TGAAAAATGCTCATCGGCTATCTT 59.116 37.500 0.00 0.00 0.00 2.40
167 168 4.274459 GTGAAAAATGCTCATCGGCTATCT 59.726 41.667 0.00 0.00 0.00 1.98
168 169 4.531332 GTGAAAAATGCTCATCGGCTATC 58.469 43.478 0.00 0.00 0.00 2.08
170 171 2.682856 GGTGAAAAATGCTCATCGGCTA 59.317 45.455 0.00 0.00 0.00 3.93
172 173 1.474077 AGGTGAAAAATGCTCATCGGC 59.526 47.619 0.00 0.00 0.00 5.54
173 174 4.576053 TCATAGGTGAAAAATGCTCATCGG 59.424 41.667 0.00 0.00 0.00 4.18
174 175 5.739752 TCATAGGTGAAAAATGCTCATCG 57.260 39.130 0.00 0.00 0.00 3.84
176 177 4.951715 TGCTCATAGGTGAAAAATGCTCAT 59.048 37.500 0.00 0.00 33.05 2.90
179 180 5.927281 AATGCTCATAGGTGAAAAATGCT 57.073 34.783 0.00 0.00 33.05 3.79
180 181 6.973229 AAAATGCTCATAGGTGAAAAATGC 57.027 33.333 0.00 0.00 33.05 3.56
181 182 8.767478 AGAAAAATGCTCATAGGTGAAAAATG 57.233 30.769 0.00 0.00 33.05 2.32
183 184 7.950512 TGAGAAAAATGCTCATAGGTGAAAAA 58.049 30.769 0.00 0.00 37.46 1.94
184 185 7.523293 TGAGAAAAATGCTCATAGGTGAAAA 57.477 32.000 0.00 0.00 37.46 2.29
185 186 7.523293 TTGAGAAAAATGCTCATAGGTGAAA 57.477 32.000 0.00 0.00 41.60 2.69
186 187 7.523293 TTTGAGAAAAATGCTCATAGGTGAA 57.477 32.000 0.00 0.00 41.60 3.18
188 189 5.803967 GCTTTGAGAAAAATGCTCATAGGTG 59.196 40.000 0.00 0.00 41.60 4.00
190 191 5.957798 TGCTTTGAGAAAAATGCTCATAGG 58.042 37.500 0.00 0.00 41.60 2.57
191 192 7.861372 CCTATGCTTTGAGAAAAATGCTCATAG 59.139 37.037 0.00 0.00 41.60 2.23
192 193 7.201848 CCCTATGCTTTGAGAAAAATGCTCATA 60.202 37.037 0.00 0.00 41.60 2.15
194 195 5.105635 CCCTATGCTTTGAGAAAAATGCTCA 60.106 40.000 0.00 0.00 40.41 4.26
195 196 5.105595 ACCCTATGCTTTGAGAAAAATGCTC 60.106 40.000 0.00 0.00 32.84 4.26
196 197 4.774200 ACCCTATGCTTTGAGAAAAATGCT 59.226 37.500 0.00 0.00 32.84 3.79
203 1359 4.640771 AGTTCACCCTATGCTTTGAGAA 57.359 40.909 0.00 0.00 0.00 2.87
228 1384 8.514594 AGAATTTTCATCAGCTATTCGACAAAA 58.485 29.630 0.00 0.00 32.05 2.44
230 1386 7.615582 AGAATTTTCATCAGCTATTCGACAA 57.384 32.000 0.00 0.00 32.05 3.18
231 1387 7.615582 AAGAATTTTCATCAGCTATTCGACA 57.384 32.000 0.00 0.00 32.05 4.35
232 1388 8.177663 TGAAAGAATTTTCATCAGCTATTCGAC 58.822 33.333 0.00 0.00 45.77 4.20
315 2820 8.356657 CAGTGTTTTTAGGTGAAATGATGGTAA 58.643 33.333 0.00 0.00 0.00 2.85
355 2860 3.057734 GCTACGTGCAACTCTTTGTAGT 58.942 45.455 0.00 0.00 42.31 2.73
362 2867 0.387367 CGTCAGCTACGTGCAACTCT 60.387 55.000 0.00 0.00 46.72 3.24
371 2876 5.264060 TGAAAGAATTTTCGTCAGCTACG 57.736 39.130 8.77 8.77 46.47 3.51
372 2877 6.357240 GTGTTGAAAGAATTTTCGTCAGCTAC 59.643 38.462 11.87 5.28 44.55 3.58
373 2878 6.037720 TGTGTTGAAAGAATTTTCGTCAGCTA 59.962 34.615 11.87 3.52 44.55 3.32
380 2885 6.486248 TCAGAGTGTGTTGAAAGAATTTTCG 58.514 36.000 0.00 0.00 44.55 3.46
393 2898 9.640963 GATTATAGTGTACTTTCAGAGTGTGTT 57.359 33.333 0.00 0.00 39.48 3.32
395 2900 9.809096 ATGATTATAGTGTACTTTCAGAGTGTG 57.191 33.333 0.00 0.00 39.48 3.82
454 3640 8.955061 TTTCGATTTCTCAAAGACAATGAATC 57.045 30.769 0.00 0.00 0.00 2.52
457 3643 7.728847 TCTTTCGATTTCTCAAAGACAATGA 57.271 32.000 0.00 0.00 32.41 2.57
523 3709 8.812972 TCCTAGCTACTTTCTTTTGATCTTGTA 58.187 33.333 0.00 0.00 0.00 2.41
525 3711 8.037758 TCTCCTAGCTACTTTCTTTTGATCTTG 58.962 37.037 0.00 0.00 0.00 3.02
526 3712 8.140112 TCTCCTAGCTACTTTCTTTTGATCTT 57.860 34.615 0.00 0.00 0.00 2.40
527 3713 7.726033 TCTCCTAGCTACTTTCTTTTGATCT 57.274 36.000 0.00 0.00 0.00 2.75
530 3716 7.540474 TCTTCTCCTAGCTACTTTCTTTTGA 57.460 36.000 0.00 0.00 0.00 2.69
531 3717 8.608844 TTTCTTCTCCTAGCTACTTTCTTTTG 57.391 34.615 0.00 0.00 0.00 2.44
532 3718 9.800572 ATTTTCTTCTCCTAGCTACTTTCTTTT 57.199 29.630 0.00 0.00 0.00 2.27
535 3721 8.038351 GTGATTTTCTTCTCCTAGCTACTTTCT 58.962 37.037 0.00 0.00 0.00 2.52
536 3722 7.819900 TGTGATTTTCTTCTCCTAGCTACTTTC 59.180 37.037 0.00 0.00 0.00 2.62
537 3723 7.680730 TGTGATTTTCTTCTCCTAGCTACTTT 58.319 34.615 0.00 0.00 0.00 2.66
538 3724 7.246171 TGTGATTTTCTTCTCCTAGCTACTT 57.754 36.000 0.00 0.00 0.00 2.24
539 3725 6.859112 TGTGATTTTCTTCTCCTAGCTACT 57.141 37.500 0.00 0.00 0.00 2.57
540 3726 7.907214 TTTGTGATTTTCTTCTCCTAGCTAC 57.093 36.000 0.00 0.00 0.00 3.58
542 3728 7.823745 TTTTTGTGATTTTCTTCTCCTAGCT 57.176 32.000 0.00 0.00 0.00 3.32
566 3752 9.741647 GTGAATTTCTTCTCTGTCTCAATTTTT 57.258 29.630 0.00 0.00 32.29 1.94
569 3755 8.512956 CATGTGAATTTCTTCTCTGTCTCAATT 58.487 33.333 0.00 0.00 32.29 2.32
570 3756 7.881751 TCATGTGAATTTCTTCTCTGTCTCAAT 59.118 33.333 0.00 0.00 32.29 2.57
571 3757 7.219322 TCATGTGAATTTCTTCTCTGTCTCAA 58.781 34.615 0.00 0.00 32.29 3.02
572 3758 6.762333 TCATGTGAATTTCTTCTCTGTCTCA 58.238 36.000 0.00 0.00 32.29 3.27
583 4487 8.345724 AGCATAGTTTCTTCATGTGAATTTCT 57.654 30.769 0.00 2.25 33.01 2.52
585 4489 8.025445 GTGAGCATAGTTTCTTCATGTGAATTT 58.975 33.333 0.00 0.00 33.01 1.82
586 4490 7.362401 GGTGAGCATAGTTTCTTCATGTGAATT 60.362 37.037 0.00 0.00 33.01 2.17
587 4491 6.094603 GGTGAGCATAGTTTCTTCATGTGAAT 59.905 38.462 0.00 0.00 33.01 2.57
589 4493 4.937620 GGTGAGCATAGTTTCTTCATGTGA 59.062 41.667 0.00 0.00 0.00 3.58
590 4494 4.201753 CGGTGAGCATAGTTTCTTCATGTG 60.202 45.833 0.00 0.00 0.00 3.21
591 4495 3.935203 CGGTGAGCATAGTTTCTTCATGT 59.065 43.478 0.00 0.00 0.00 3.21
594 4498 3.849911 CTCGGTGAGCATAGTTTCTTCA 58.150 45.455 0.00 0.00 0.00 3.02
607 4511 0.456142 TCGTTCATTCGCTCGGTGAG 60.456 55.000 0.00 0.00 0.00 3.51
610 4514 1.342082 CGTTCGTTCATTCGCTCGGT 61.342 55.000 0.00 0.00 0.00 4.69
613 4517 1.522421 CGTTCGTTCGTTCATTCGCTC 60.522 52.381 0.00 0.00 0.00 5.03
614 4518 0.433492 CGTTCGTTCGTTCATTCGCT 59.567 50.000 0.00 0.00 0.00 4.93
617 4521 1.522421 CGCTCGTTCGTTCGTTCATTC 60.522 52.381 2.67 0.00 0.00 2.67
618 4522 0.433492 CGCTCGTTCGTTCGTTCATT 59.567 50.000 2.67 0.00 0.00 2.57
620 4524 0.591994 TTCGCTCGTTCGTTCGTTCA 60.592 50.000 2.67 0.00 0.00 3.18
621 4525 0.179314 GTTCGCTCGTTCGTTCGTTC 60.179 55.000 2.67 0.00 0.00 3.95
622 4526 1.842028 GTTCGCTCGTTCGTTCGTT 59.158 52.632 2.67 0.00 0.00 3.85
623 4527 2.352333 CGTTCGCTCGTTCGTTCGT 61.352 57.895 2.67 0.00 0.00 3.85
625 4529 0.499761 TTTCGTTCGCTCGTTCGTTC 59.500 50.000 8.06 0.00 0.00 3.95
626 4530 0.227986 GTTTCGTTCGCTCGTTCGTT 59.772 50.000 8.06 0.00 0.00 3.85
627 4531 1.842028 GTTTCGTTCGCTCGTTCGT 59.158 52.632 8.06 0.00 0.00 3.85
629 4533 1.127225 CCGTTTCGTTCGCTCGTTC 59.873 57.895 0.00 0.00 0.00 3.95
630 4534 2.305127 CCCGTTTCGTTCGCTCGTT 61.305 57.895 0.00 0.00 0.00 3.85
631 4535 2.732094 CCCGTTTCGTTCGCTCGT 60.732 61.111 0.00 0.00 0.00 4.18
632 4536 4.130281 GCCCGTTTCGTTCGCTCG 62.130 66.667 0.00 0.00 0.00 5.03
633 4537 2.737376 AGCCCGTTTCGTTCGCTC 60.737 61.111 0.00 0.00 0.00 5.03
634 4538 3.041940 CAGCCCGTTTCGTTCGCT 61.042 61.111 0.00 0.00 0.00 4.93
635 4539 4.084888 CCAGCCCGTTTCGTTCGC 62.085 66.667 0.00 0.00 0.00 4.70
636 4540 3.419759 CCCAGCCCGTTTCGTTCG 61.420 66.667 0.00 0.00 0.00 3.95
649 4553 2.045926 CGGTTCTCTTGGGCCCAG 60.046 66.667 26.87 19.10 0.00 4.45
650 4554 2.002018 AAACGGTTCTCTTGGGCCCA 62.002 55.000 24.45 24.45 0.00 5.36
651 4555 1.228459 AAACGGTTCTCTTGGGCCC 60.228 57.895 17.59 17.59 0.00 5.80
676 5059 1.249407 ACAGAAGGTGTCTCTCGTCC 58.751 55.000 0.00 0.00 31.90 4.79
704 5087 2.536997 ATAAAGCCCGTCTGCCGCTT 62.537 55.000 0.00 0.00 44.51 4.68
705 5088 2.925162 GATAAAGCCCGTCTGCCGCT 62.925 60.000 0.00 0.00 34.38 5.52
706 5089 2.513897 ATAAAGCCCGTCTGCCGC 60.514 61.111 0.00 0.00 34.38 6.53
707 5090 1.887707 GGATAAAGCCCGTCTGCCG 60.888 63.158 0.00 0.00 0.00 5.69
708 5091 1.887707 CGGATAAAGCCCGTCTGCC 60.888 63.158 0.00 0.00 41.91 4.85
709 5092 0.876342 CTCGGATAAAGCCCGTCTGC 60.876 60.000 0.00 0.00 46.53 4.26
710 5093 0.744874 TCTCGGATAAAGCCCGTCTG 59.255 55.000 0.00 0.00 46.53 3.51
711 5094 1.033574 CTCTCGGATAAAGCCCGTCT 58.966 55.000 0.00 0.00 46.53 4.18
712 5095 0.745468 ACTCTCGGATAAAGCCCGTC 59.255 55.000 0.00 0.00 46.53 4.79
713 5096 0.745468 GACTCTCGGATAAAGCCCGT 59.255 55.000 0.00 0.00 46.53 5.28
715 5098 3.553302 GCTTAGACTCTCGGATAAAGCCC 60.553 52.174 0.00 0.00 33.47 5.19
716 5099 3.644823 GCTTAGACTCTCGGATAAAGCC 58.355 50.000 0.00 0.00 33.47 4.35
717 5100 3.301706 CGCTTAGACTCTCGGATAAAGC 58.698 50.000 0.00 0.00 35.64 3.51
718 5101 3.304794 CCCGCTTAGACTCTCGGATAAAG 60.305 52.174 10.43 0.00 44.23 1.85
719 5102 2.621998 CCCGCTTAGACTCTCGGATAAA 59.378 50.000 10.43 0.00 44.23 1.40
782 5165 0.824759 CGAGGAGAAACCCTAGGTGG 59.175 60.000 8.29 0.00 40.05 4.61
920 6648 2.789203 GCGCGGAAGTGAGTTAGCG 61.789 63.158 8.83 15.04 46.66 4.26
923 6651 0.530744 ATCTGCGCGGAAGTGAGTTA 59.469 50.000 25.06 0.00 46.66 2.24
1122 6858 1.938657 CTGGAAGAGAAGCCGAGCGA 61.939 60.000 0.00 0.00 34.07 4.93
1123 6859 1.518133 CTGGAAGAGAAGCCGAGCG 60.518 63.158 0.00 0.00 34.07 5.03
1124 6860 1.893786 TCTGGAAGAGAAGCCGAGC 59.106 57.895 0.00 0.00 38.67 5.03
1179 6921 1.378762 CCCGAACCCCACATGAACT 59.621 57.895 0.00 0.00 0.00 3.01
1204 6946 2.494530 GCTAGCAGAGGAGGTCGGG 61.495 68.421 10.63 0.00 0.00 5.14
1265 7008 2.565394 CGATTACGCAGACGACGCC 61.565 63.158 0.00 0.00 43.93 5.68
1300 7043 3.884895 TCACAGAACATCAACCACAAGT 58.115 40.909 0.00 0.00 0.00 3.16
1303 7046 3.615155 TGTTCACAGAACATCAACCACA 58.385 40.909 8.39 0.00 0.00 4.17
1305 7048 3.569277 CCATGTTCACAGAACATCAACCA 59.431 43.478 19.32 0.00 38.69 3.67
1311 7062 3.308402 CCCCTACCATGTTCACAGAACAT 60.308 47.826 17.12 17.12 41.18 2.71
1316 7067 0.991920 ACCCCCTACCATGTTCACAG 59.008 55.000 0.00 0.00 0.00 3.66
1317 7068 0.695924 CACCCCCTACCATGTTCACA 59.304 55.000 0.00 0.00 0.00 3.58
1322 7073 1.163408 AAAACCACCCCCTACCATGT 58.837 50.000 0.00 0.00 0.00 3.21
1325 7076 0.935194 AACAAAACCACCCCCTACCA 59.065 50.000 0.00 0.00 0.00 3.25
1326 7077 1.334160 CAACAAAACCACCCCCTACC 58.666 55.000 0.00 0.00 0.00 3.18
1334 7085 6.560711 ACAGTTCATCTTACAACAAAACCAC 58.439 36.000 0.00 0.00 0.00 4.16
1347 7098 6.256539 CACGATGCAATACTACAGTTCATCTT 59.743 38.462 0.00 0.00 0.00 2.40
1348 7099 5.750547 CACGATGCAATACTACAGTTCATCT 59.249 40.000 0.00 0.00 0.00 2.90
1374 7125 7.278646 CAGAAAAGATAGACCGTGAATGAATGA 59.721 37.037 0.00 0.00 0.00 2.57
1375 7126 7.065085 ACAGAAAAGATAGACCGTGAATGAATG 59.935 37.037 0.00 0.00 0.00 2.67
1376 7127 7.106239 ACAGAAAAGATAGACCGTGAATGAAT 58.894 34.615 0.00 0.00 0.00 2.57
1377 7128 6.464222 ACAGAAAAGATAGACCGTGAATGAA 58.536 36.000 0.00 0.00 0.00 2.57
1378 7129 6.037786 ACAGAAAAGATAGACCGTGAATGA 57.962 37.500 0.00 0.00 0.00 2.57
1379 7130 7.221067 GTCTACAGAAAAGATAGACCGTGAATG 59.779 40.741 0.00 0.00 39.18 2.67
1380 7131 7.093902 TGTCTACAGAAAAGATAGACCGTGAAT 60.094 37.037 7.89 0.00 42.74 2.57
1381 7132 6.208007 TGTCTACAGAAAAGATAGACCGTGAA 59.792 38.462 7.89 0.00 42.74 3.18
1384 7135 5.105837 GGTGTCTACAGAAAAGATAGACCGT 60.106 44.000 7.89 0.00 42.74 4.83
1385 7136 5.105877 TGGTGTCTACAGAAAAGATAGACCG 60.106 44.000 7.89 0.00 42.74 4.79
1386 7137 6.071278 AGTGGTGTCTACAGAAAAGATAGACC 60.071 42.308 7.89 0.00 42.74 3.85
1389 7140 6.925211 TCAGTGGTGTCTACAGAAAAGATAG 58.075 40.000 0.00 0.00 0.00 2.08
1414 7165 2.798680 CACTACAGAGCACCATACGAC 58.201 52.381 0.00 0.00 0.00 4.34
1426 7177 7.246171 AGAAGGAAATTTCTAGCACTACAGA 57.754 36.000 17.42 0.00 35.70 3.41
1431 7183 8.325046 ACATCTTAGAAGGAAATTTCTAGCACT 58.675 33.333 17.42 11.80 39.92 4.40
1432 7184 8.499403 ACATCTTAGAAGGAAATTTCTAGCAC 57.501 34.615 17.42 0.98 39.92 4.40
1449 7201 7.919690 TCTCAAGAACAAACACAACATCTTAG 58.080 34.615 0.00 0.00 0.00 2.18
1535 7289 0.738762 CAGTGTGCAGTGGGATCTCG 60.739 60.000 0.00 0.00 0.00 4.04
1603 7357 2.294233 AGATTTTGTCATGCTGCACGTT 59.706 40.909 3.57 0.00 0.00 3.99
1605 7359 2.624316 AGATTTTGTCATGCTGCACG 57.376 45.000 3.57 0.00 0.00 5.34
1616 7400 5.301805 CCAAGTCTAACACCCAAGATTTTGT 59.698 40.000 0.00 0.00 32.21 2.83
1624 7408 2.370849 GTCTCCCAAGTCTAACACCCAA 59.629 50.000 0.00 0.00 0.00 4.12
1639 7423 4.385405 AGCAGCAGCACGTCTCCC 62.385 66.667 3.17 0.00 45.49 4.30
1640 7424 3.117171 CAGCAGCAGCACGTCTCC 61.117 66.667 3.17 0.00 45.49 3.71
1652 7436 2.230994 TAGTCCTTCCGCTGCAGCAG 62.231 60.000 36.03 26.87 42.21 4.24
1655 7439 1.156645 GCATAGTCCTTCCGCTGCAG 61.157 60.000 10.11 10.11 0.00 4.41
1656 7440 1.153369 GCATAGTCCTTCCGCTGCA 60.153 57.895 0.00 0.00 0.00 4.41
1658 7442 1.009829 GTTGCATAGTCCTTCCGCTG 58.990 55.000 0.00 0.00 0.00 5.18
1659 7443 0.905357 AGTTGCATAGTCCTTCCGCT 59.095 50.000 0.00 0.00 0.00 5.52
1777 7561 5.992217 AGACACTTGAAGAAACTGATGTACC 59.008 40.000 0.00 0.00 0.00 3.34
1825 7620 2.158623 TCCAGAAACATTGCAGGAGTGT 60.159 45.455 0.00 0.00 0.00 3.55
1835 7634 5.126384 TCGGACTTTGTTTTCCAGAAACATT 59.874 36.000 5.30 0.00 39.56 2.71
1906 7758 3.386078 ACCCGCAGATAGATAGCATATGG 59.614 47.826 4.56 0.00 0.00 2.74
1920 7772 0.322322 AACCGAATAACACCCGCAGA 59.678 50.000 0.00 0.00 0.00 4.26
1924 7776 3.800531 AGGAATAACCGAATAACACCCG 58.199 45.455 0.00 0.00 44.74 5.28
1925 7777 5.065602 GTGAAGGAATAACCGAATAACACCC 59.934 44.000 0.00 0.00 44.74 4.61
1936 7816 7.275560 GCATACAAACATTGTGAAGGAATAACC 59.724 37.037 6.01 0.00 45.03 2.85
2068 8243 4.826556 AGAGCAGAACAGGTGAATTAGTC 58.173 43.478 0.00 0.00 0.00 2.59
2313 8604 5.181748 ACTGCAGATCTCCTGATAACAAAC 58.818 41.667 23.35 0.00 45.78 2.93
2316 8607 6.324770 TGATAACTGCAGATCTCCTGATAACA 59.675 38.462 23.35 0.00 45.78 2.41
2317 8608 6.644592 GTGATAACTGCAGATCTCCTGATAAC 59.355 42.308 23.35 1.97 45.78 1.89
2322 8613 3.387374 AGGTGATAACTGCAGATCTCCTG 59.613 47.826 26.31 1.70 42.00 3.86
2342 8633 5.467735 TGATCGAGCAATGAACAATGATAGG 59.532 40.000 0.00 0.00 0.00 2.57
2346 8637 4.496840 GCATGATCGAGCAATGAACAATGA 60.497 41.667 7.76 0.00 0.00 2.57
2350 8641 2.353579 CTGCATGATCGAGCAATGAACA 59.646 45.455 7.76 0.83 40.73 3.18
2351 8642 2.853662 GCTGCATGATCGAGCAATGAAC 60.854 50.000 7.76 0.00 40.73 3.18
2355 8646 0.812811 ACGCTGCATGATCGAGCAAT 60.813 50.000 7.76 0.00 40.73 3.56
2481 8805 0.250124 TGTTGGTGACCACGACATCC 60.250 55.000 2.46 0.00 30.78 3.51
2484 8808 1.092921 GCTTGTTGGTGACCACGACA 61.093 55.000 2.46 4.03 30.78 4.35
2582 8906 6.877611 TTTCTTCTCAAACAGGGATGTAAC 57.122 37.500 0.00 0.00 0.00 2.50
2637 8961 1.136891 GCTCACACCAAAAAGGCAGTT 59.863 47.619 0.00 0.00 43.14 3.16
2640 8964 1.189752 TTGCTCACACCAAAAAGGCA 58.810 45.000 0.00 0.00 43.14 4.75
2690 9014 0.938008 TGCGTAATTCAACACGTGCA 59.062 45.000 17.22 0.00 40.25 4.57
2769 9119 5.472137 ACGTTACAGGAACAATAACAGCAAT 59.528 36.000 0.00 0.00 37.99 3.56
2788 9138 2.732597 GCAACAGCACCACAAAACGTTA 60.733 45.455 0.00 0.00 0.00 3.18
2791 9141 0.179140 AGCAACAGCACCACAAAACG 60.179 50.000 0.00 0.00 0.00 3.60
2837 9187 2.688507 CAACTGACGTGTAGCCATTCT 58.311 47.619 0.00 0.00 0.00 2.40
2881 9231 0.506506 CAACGGCCAAAAACGATTGC 59.493 50.000 2.24 0.00 0.00 3.56
2883 9233 0.747852 ACCAACGGCCAAAAACGATT 59.252 45.000 2.24 0.00 0.00 3.34
2889 9239 1.142748 CTGCAACCAACGGCCAAAA 59.857 52.632 2.24 0.00 0.00 2.44
2890 9240 1.112315 ATCTGCAACCAACGGCCAAA 61.112 50.000 2.24 0.00 0.00 3.28
2891 9241 1.112315 AATCTGCAACCAACGGCCAA 61.112 50.000 2.24 0.00 0.00 4.52
2892 9242 1.530419 AATCTGCAACCAACGGCCA 60.530 52.632 2.24 0.00 0.00 5.36
2893 9243 1.080569 CAATCTGCAACCAACGGCC 60.081 57.895 0.00 0.00 0.00 6.13
2894 9244 0.313672 TTCAATCTGCAACCAACGGC 59.686 50.000 0.00 0.00 0.00 5.68
2902 9252 1.523154 GCCCACCGTTCAATCTGCAA 61.523 55.000 0.00 0.00 0.00 4.08
2907 9257 2.700773 GGCTGCCCACCGTTCAATC 61.701 63.158 7.66 0.00 0.00 2.67
2926 9276 2.355615 GGGAAGAAGCTGGAGGAAGAAG 60.356 54.545 0.00 0.00 0.00 2.85
2928 9278 1.280457 GGGAAGAAGCTGGAGGAAGA 58.720 55.000 0.00 0.00 0.00 2.87
2929 9279 0.254462 GGGGAAGAAGCTGGAGGAAG 59.746 60.000 0.00 0.00 0.00 3.46
2930 9280 0.475632 TGGGGAAGAAGCTGGAGGAA 60.476 55.000 0.00 0.00 0.00 3.36
2931 9281 0.911525 CTGGGGAAGAAGCTGGAGGA 60.912 60.000 0.00 0.00 0.00 3.71
2932 9282 1.606531 CTGGGGAAGAAGCTGGAGG 59.393 63.158 0.00 0.00 0.00 4.30
2933 9283 1.606531 CCTGGGGAAGAAGCTGGAG 59.393 63.158 0.00 0.00 0.00 3.86
2934 9284 2.606587 GCCTGGGGAAGAAGCTGGA 61.607 63.158 0.00 0.00 0.00 3.86
2935 9285 2.044551 GCCTGGGGAAGAAGCTGG 60.045 66.667 0.00 0.00 0.00 4.85
2936 9286 2.044551 GGCCTGGGGAAGAAGCTG 60.045 66.667 0.00 0.00 0.00 4.24
2937 9287 3.721706 CGGCCTGGGGAAGAAGCT 61.722 66.667 0.00 0.00 0.00 3.74
2957 9307 2.052690 GGTCACGGGCTCAGCTAGA 61.053 63.158 0.00 0.00 0.00 2.43
2959 9309 3.449227 CGGTCACGGGCTCAGCTA 61.449 66.667 0.00 0.00 36.18 3.32
3008 9459 2.925966 TCTTAGGGTTTAGGACGGGA 57.074 50.000 0.00 0.00 0.00 5.14
3021 9472 7.129425 AGAGCCACCCTATTATCTATCTTAGG 58.871 42.308 0.00 0.00 0.00 2.69
3022 9473 8.058847 AGAGAGCCACCCTATTATCTATCTTAG 58.941 40.741 0.00 0.00 0.00 2.18
3023 9474 7.836685 CAGAGAGCCACCCTATTATCTATCTTA 59.163 40.741 0.00 0.00 0.00 2.10
3024 9475 6.667414 CAGAGAGCCACCCTATTATCTATCTT 59.333 42.308 0.00 0.00 0.00 2.40
3025 9476 6.194235 CAGAGAGCCACCCTATTATCTATCT 58.806 44.000 0.00 0.00 0.00 1.98
3026 9477 5.362430 CCAGAGAGCCACCCTATTATCTATC 59.638 48.000 0.00 0.00 0.00 2.08
3027 9478 5.276440 CCAGAGAGCCACCCTATTATCTAT 58.724 45.833 0.00 0.00 0.00 1.98
3028 9479 4.678256 CCAGAGAGCCACCCTATTATCTA 58.322 47.826 0.00 0.00 0.00 1.98
3029 9480 3.515562 CCAGAGAGCCACCCTATTATCT 58.484 50.000 0.00 0.00 0.00 1.98
3030 9481 2.027653 GCCAGAGAGCCACCCTATTATC 60.028 54.545 0.00 0.00 0.00 1.75
3031 9482 1.981495 GCCAGAGAGCCACCCTATTAT 59.019 52.381 0.00 0.00 0.00 1.28
3032 9483 1.062121 AGCCAGAGAGCCACCCTATTA 60.062 52.381 0.00 0.00 0.00 0.98
3033 9484 0.327000 AGCCAGAGAGCCACCCTATT 60.327 55.000 0.00 0.00 0.00 1.73
3034 9485 0.762461 GAGCCAGAGAGCCACCCTAT 60.762 60.000 0.00 0.00 0.00 2.57
3035 9486 1.381872 GAGCCAGAGAGCCACCCTA 60.382 63.158 0.00 0.00 0.00 3.53
3036 9487 2.686835 GAGCCAGAGAGCCACCCT 60.687 66.667 0.00 0.00 0.00 4.34
3037 9488 4.154347 CGAGCCAGAGAGCCACCC 62.154 72.222 0.00 0.00 0.00 4.61
3038 9489 4.828925 GCGAGCCAGAGAGCCACC 62.829 72.222 0.00 0.00 0.00 4.61
3039 9490 3.714871 GAGCGAGCCAGAGAGCCAC 62.715 68.421 0.00 0.00 0.00 5.01
3040 9491 3.456365 GAGCGAGCCAGAGAGCCA 61.456 66.667 0.00 0.00 0.00 4.75
3041 9492 4.567385 CGAGCGAGCCAGAGAGCC 62.567 72.222 0.00 0.00 0.00 4.70
3042 9493 4.567385 CCGAGCGAGCCAGAGAGC 62.567 72.222 0.00 0.00 0.00 4.09
3043 9494 3.898509 CCCGAGCGAGCCAGAGAG 61.899 72.222 0.00 0.00 0.00 3.20
3050 9501 2.644555 TTTAGGATGCCCGAGCGAGC 62.645 60.000 0.00 0.00 44.31 5.03
3051 9502 0.876342 GTTTAGGATGCCCGAGCGAG 60.876 60.000 0.00 0.00 44.31 5.03
3052 9503 1.143183 GTTTAGGATGCCCGAGCGA 59.857 57.895 0.00 0.00 44.31 4.93
3053 9504 1.887707 GGTTTAGGATGCCCGAGCG 60.888 63.158 0.00 0.00 44.31 5.03
3054 9505 1.526225 GGGTTTAGGATGCCCGAGC 60.526 63.158 0.00 0.00 37.58 5.03
3055 9506 1.420430 TAGGGTTTAGGATGCCCGAG 58.580 55.000 0.00 0.00 46.69 4.63
3056 9507 1.766496 CTTAGGGTTTAGGATGCCCGA 59.234 52.381 0.00 0.00 46.69 5.14
3057 9508 1.766496 TCTTAGGGTTTAGGATGCCCG 59.234 52.381 0.00 0.00 46.69 6.13
3058 9509 4.844655 TCTATCTTAGGGTTTAGGATGCCC 59.155 45.833 0.00 0.00 42.64 5.36
3059 9510 6.628644 ATCTATCTTAGGGTTTAGGATGCC 57.371 41.667 0.00 0.00 0.00 4.40
3060 9511 9.606631 CATTATCTATCTTAGGGTTTAGGATGC 57.393 37.037 0.00 0.00 0.00 3.91
3062 9513 9.285359 CCCATTATCTATCTTAGGGTTTAGGAT 57.715 37.037 0.00 0.00 0.00 3.24
3063 9514 7.682890 CCCCATTATCTATCTTAGGGTTTAGGA 59.317 40.741 0.00 0.00 32.90 2.94
3064 9515 7.092399 CCCCCATTATCTATCTTAGGGTTTAGG 60.092 44.444 0.00 0.00 32.90 2.69
3065 9516 7.461363 ACCCCCATTATCTATCTTAGGGTTTAG 59.539 40.741 0.00 0.00 42.64 1.85
3066 9517 7.238933 CACCCCCATTATCTATCTTAGGGTTTA 59.761 40.741 0.00 0.00 42.64 2.01
3067 9518 6.045577 CACCCCCATTATCTATCTTAGGGTTT 59.954 42.308 0.00 0.00 42.64 3.27
3068 9519 5.551977 CACCCCCATTATCTATCTTAGGGTT 59.448 44.000 0.00 0.00 42.64 4.11
3069 9520 5.101529 CACCCCCATTATCTATCTTAGGGT 58.898 45.833 0.00 0.00 46.16 4.34
3070 9521 4.475016 CCACCCCCATTATCTATCTTAGGG 59.525 50.000 0.00 0.00 38.04 3.53
3071 9522 4.080299 GCCACCCCCATTATCTATCTTAGG 60.080 50.000 0.00 0.00 0.00 2.69
3072 9523 4.785376 AGCCACCCCCATTATCTATCTTAG 59.215 45.833 0.00 0.00 0.00 2.18
3073 9524 4.774779 AGCCACCCCCATTATCTATCTTA 58.225 43.478 0.00 0.00 0.00 2.10
3074 9525 3.589288 GAGCCACCCCCATTATCTATCTT 59.411 47.826 0.00 0.00 0.00 2.40
3075 9526 3.181390 AGAGCCACCCCCATTATCTATCT 60.181 47.826 0.00 0.00 0.00 1.98
3076 9527 3.185455 AGAGCCACCCCCATTATCTATC 58.815 50.000 0.00 0.00 0.00 2.08
3077 9528 3.185455 GAGAGCCACCCCCATTATCTAT 58.815 50.000 0.00 0.00 0.00 1.98
3078 9529 2.621070 GAGAGCCACCCCCATTATCTA 58.379 52.381 0.00 0.00 0.00 1.98
3079 9530 1.439543 GAGAGCCACCCCCATTATCT 58.560 55.000 0.00 0.00 0.00 1.98
3080 9531 0.402121 GGAGAGCCACCCCCATTATC 59.598 60.000 0.00 0.00 0.00 1.75
3081 9532 1.418908 CGGAGAGCCACCCCCATTAT 61.419 60.000 0.00 0.00 0.00 1.28
3082 9533 2.070039 CGGAGAGCCACCCCCATTA 61.070 63.158 0.00 0.00 0.00 1.90
3083 9534 3.411517 CGGAGAGCCACCCCCATT 61.412 66.667 0.00 0.00 0.00 3.16
3089 9540 4.459089 GTGAGCCGGAGAGCCACC 62.459 72.222 5.05 0.00 31.63 4.61
3090 9541 3.363844 GAGTGAGCCGGAGAGCCAC 62.364 68.421 5.05 4.76 35.46 5.01
3091 9542 3.071206 GAGTGAGCCGGAGAGCCA 61.071 66.667 5.05 0.00 0.00 4.75
3092 9543 4.200283 CGAGTGAGCCGGAGAGCC 62.200 72.222 5.05 0.00 0.00 4.70
3098 9549 4.697756 TTTGCCCGAGTGAGCCGG 62.698 66.667 0.00 0.00 46.10 6.13
3099 9550 3.423154 GTTTGCCCGAGTGAGCCG 61.423 66.667 0.00 0.00 0.00 5.52
3100 9551 2.032681 AGTTTGCCCGAGTGAGCC 59.967 61.111 0.00 0.00 0.00 4.70
3101 9552 1.004440 AGAGTTTGCCCGAGTGAGC 60.004 57.895 0.00 0.00 0.00 4.26
3102 9553 0.318441 TGAGAGTTTGCCCGAGTGAG 59.682 55.000 0.00 0.00 0.00 3.51
3103 9554 0.756294 TTGAGAGTTTGCCCGAGTGA 59.244 50.000 0.00 0.00 0.00 3.41
3104 9555 1.593196 TTTGAGAGTTTGCCCGAGTG 58.407 50.000 0.00 0.00 0.00 3.51
3105 9556 2.341846 TTTTGAGAGTTTGCCCGAGT 57.658 45.000 0.00 0.00 0.00 4.18
3106 9557 4.093556 GTCTATTTTGAGAGTTTGCCCGAG 59.906 45.833 0.00 0.00 0.00 4.63
3107 9558 4.000988 GTCTATTTTGAGAGTTTGCCCGA 58.999 43.478 0.00 0.00 0.00 5.14
3108 9559 4.003648 AGTCTATTTTGAGAGTTTGCCCG 58.996 43.478 0.00 0.00 0.00 6.13
3109 9560 6.127980 GGTTAGTCTATTTTGAGAGTTTGCCC 60.128 42.308 0.00 0.00 31.42 5.36
3110 9561 6.127980 GGGTTAGTCTATTTTGAGAGTTTGCC 60.128 42.308 0.00 0.00 31.42 4.52
3111 9562 6.127980 GGGGTTAGTCTATTTTGAGAGTTTGC 60.128 42.308 0.00 0.00 31.42 3.68
3112 9563 6.940298 TGGGGTTAGTCTATTTTGAGAGTTTG 59.060 38.462 0.00 0.00 31.42 2.93
3113 9564 7.086685 TGGGGTTAGTCTATTTTGAGAGTTT 57.913 36.000 0.00 0.00 31.42 2.66
3128 9579 6.239487 GCCTGACTTTTAAATTTGGGGTTAGT 60.239 38.462 0.00 0.00 0.00 2.24
3131 9582 4.502431 CGCCTGACTTTTAAATTTGGGGTT 60.502 41.667 0.00 0.00 0.00 4.11
3132 9583 3.006430 CGCCTGACTTTTAAATTTGGGGT 59.994 43.478 0.00 0.00 0.00 4.95
3134 9585 4.234574 GTCGCCTGACTTTTAAATTTGGG 58.765 43.478 0.00 0.00 42.08 4.12
3192 9663 3.181516 GCAAGAAGAAATACCGACAGCAG 60.182 47.826 0.00 0.00 0.00 4.24
3235 9706 4.575885 TGATACTCTGGTTGCAAGGTAAC 58.424 43.478 0.00 0.00 0.00 2.50
3274 9745 8.321716 GTCATCGATTCAAACATTAGTACAGAC 58.678 37.037 0.00 0.00 0.00 3.51
3305 9776 6.061022 TCCAGACCAGTGCTTTATTCATAA 57.939 37.500 0.00 0.00 0.00 1.90
3306 9777 5.692115 TCCAGACCAGTGCTTTATTCATA 57.308 39.130 0.00 0.00 0.00 2.15
3313 9784 3.010584 ACCATATTCCAGACCAGTGCTTT 59.989 43.478 0.00 0.00 0.00 3.51
3337 9808 2.605338 CCAAAACTGACGAGTGCCAATG 60.605 50.000 0.00 0.00 30.61 2.82
3347 9818 2.160615 TGTGTGACAACCAAAACTGACG 59.839 45.455 0.00 0.00 0.00 4.35
3365 9836 0.877743 TCAGACAGACGAGAGCTGTG 59.122 55.000 0.00 0.00 44.42 3.66
3368 9839 1.904287 AGTTCAGACAGACGAGAGCT 58.096 50.000 0.00 0.00 0.00 4.09
3398 9869 2.744202 GTCTGTGTTGCTGAGGGTAATG 59.256 50.000 0.00 0.00 0.00 1.90
3402 9873 1.344953 TGGTCTGTGTTGCTGAGGGT 61.345 55.000 0.00 0.00 0.00 4.34
3404 9875 1.679139 TTTGGTCTGTGTTGCTGAGG 58.321 50.000 0.00 0.00 0.00 3.86
3409 9880 0.248866 CCCGTTTTGGTCTGTGTTGC 60.249 55.000 0.00 0.00 35.15 4.17
3418 9889 1.752498 GTTTTCTGGTCCCGTTTTGGT 59.248 47.619 0.00 0.00 35.15 3.67
3424 9895 1.210967 TCACTTGTTTTCTGGTCCCGT 59.789 47.619 0.00 0.00 0.00 5.28
3434 9905 5.200483 TGAGGAGTTTGGATCACTTGTTTT 58.800 37.500 0.00 0.00 0.00 2.43
3482 9955 2.896854 CGGCGGGTGATGATGGTG 60.897 66.667 0.00 0.00 0.00 4.17
3494 9967 0.179111 ATATCGTGGATATGCGGCGG 60.179 55.000 9.78 0.00 34.40 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.