Multiple sequence alignment - TraesCS5A01G276300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G276300 chr5A 100.000 3571 0 0 1 3571 485409815 485406245 0.000000e+00 6595.0
1 TraesCS5A01G276300 chr5A 87.324 710 84 3 1869 2572 485387071 485386362 0.000000e+00 808.0
2 TraesCS5A01G276300 chr5A 85.596 722 92 11 1869 2581 485469163 485468445 0.000000e+00 747.0
3 TraesCS5A01G276300 chr5A 88.246 570 67 0 981 1550 485388369 485387800 0.000000e+00 682.0
4 TraesCS5A01G276300 chr5A 85.331 559 56 10 996 1546 485469758 485469218 4.030000e-154 555.0
5 TraesCS5A01G276300 chr5B 94.911 2024 74 12 728 2741 461405522 461403518 0.000000e+00 3140.0
6 TraesCS5A01G276300 chr5B 88.326 711 80 2 1869 2576 461304189 461303479 0.000000e+00 850.0
7 TraesCS5A01G276300 chr5B 85.814 719 94 7 1869 2580 461545102 461544385 0.000000e+00 756.0
8 TraesCS5A01G276300 chr5B 87.380 626 70 8 946 1566 461491961 461491340 0.000000e+00 710.0
9 TraesCS5A01G276300 chr5B 88.656 573 62 3 981 1550 461305542 461304970 0.000000e+00 695.0
10 TraesCS5A01G276300 chr5B 87.601 621 44 6 2741 3355 461403476 461402883 0.000000e+00 689.0
11 TraesCS5A01G276300 chr5B 89.451 474 50 0 1870 2343 461491243 461490770 1.830000e-167 599.0
12 TraesCS5A01G276300 chr5B 88.039 510 54 4 1028 1535 461545927 461545423 6.600000e-167 597.0
13 TraesCS5A01G276300 chr5B 85.153 458 60 7 9 463 145487763 145488215 2.510000e-126 462.0
14 TraesCS5A01G276300 chr5B 100.000 28 0 0 1732 1759 461405582 461405609 6.000000e-03 52.8
15 TraesCS5A01G276300 chr5D 94.723 1895 72 11 865 2746 384629924 384628045 0.000000e+00 2920.0
16 TraesCS5A01G276300 chr5D 87.923 679 82 0 1894 2572 384479037 384478359 0.000000e+00 800.0
17 TraesCS5A01G276300 chr5D 89.005 573 60 3 981 1550 384480412 384479840 0.000000e+00 706.0
18 TraesCS5A01G276300 chr5D 93.103 435 18 9 2741 3170 384628008 384627581 8.420000e-176 627.0
19 TraesCS5A01G276300 chr5D 87.798 336 35 5 3205 3540 384627576 384627247 4.320000e-104 388.0
20 TraesCS5A01G276300 chr5D 83.453 417 30 13 466 857 384630360 384629958 5.670000e-93 351.0
21 TraesCS5A01G276300 chr5D 97.059 34 0 1 3534 3567 491010706 491010674 4.980000e-04 56.5
22 TraesCS5A01G276300 chr7D 86.499 437 52 6 9 443 312538400 312538831 1.160000e-129 473.0
23 TraesCS5A01G276300 chr6B 85.558 457 59 6 9 463 96658015 96657564 4.170000e-129 472.0
24 TraesCS5A01G276300 chr6B 76.508 315 45 13 609 907 64865860 64865559 1.030000e-30 145.0
25 TraesCS5A01G276300 chrUn 85.371 458 59 7 9 463 465680603 465680151 5.400000e-128 468.0
26 TraesCS5A01G276300 chr3A 85.371 458 59 7 9 463 634684013 634684465 5.400000e-128 468.0
27 TraesCS5A01G276300 chr4A 85.033 461 61 7 9 466 347513999 347513544 2.510000e-126 462.0
28 TraesCS5A01G276300 chr2B 84.967 459 61 7 9 464 44436750 44436297 3.250000e-125 459.0
29 TraesCS5A01G276300 chr2A 84.731 465 63 7 9 470 7967327 7967786 3.250000e-125 459.0
30 TraesCS5A01G276300 chr7B 84.934 458 61 7 9 463 745027463 745027915 1.170000e-124 457.0
31 TraesCS5A01G276300 chr7B 100.000 29 0 0 3533 3561 40895958 40895986 2.000000e-03 54.7
32 TraesCS5A01G276300 chr6A 76.508 315 41 20 612 907 35352795 35352495 1.340000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G276300 chr5A 485406245 485409815 3570 True 6595.0 6595 100.00000 1 3571 1 chr5A.!!$R1 3570
1 TraesCS5A01G276300 chr5A 485386362 485388369 2007 True 745.0 808 87.78500 981 2572 2 chr5A.!!$R2 1591
2 TraesCS5A01G276300 chr5A 485468445 485469758 1313 True 651.0 747 85.46350 996 2581 2 chr5A.!!$R3 1585
3 TraesCS5A01G276300 chr5B 461402883 461405522 2639 True 1914.5 3140 91.25600 728 3355 2 chr5B.!!$R2 2627
4 TraesCS5A01G276300 chr5B 461303479 461305542 2063 True 772.5 850 88.49100 981 2576 2 chr5B.!!$R1 1595
5 TraesCS5A01G276300 chr5B 461544385 461545927 1542 True 676.5 756 86.92650 1028 2580 2 chr5B.!!$R4 1552
6 TraesCS5A01G276300 chr5B 461490770 461491961 1191 True 654.5 710 88.41550 946 2343 2 chr5B.!!$R3 1397
7 TraesCS5A01G276300 chr5D 384627247 384630360 3113 True 1071.5 2920 89.76925 466 3540 4 chr5D.!!$R3 3074
8 TraesCS5A01G276300 chr5D 384478359 384480412 2053 True 753.0 800 88.46400 981 2572 2 chr5D.!!$R2 1591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
64 65 0.037790 AGTCTCTCAAACTCAGCCGC 60.038 55.0 0.00 0.0 0.0 6.53 F
252 253 0.109272 TCACGAAGCCTCTAACGCAG 60.109 55.0 0.00 0.0 0.0 5.18 F
539 547 0.179034 CCTATCTCCTGGCTGCCAAC 60.179 60.0 23.51 0.0 30.8 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1571 1739 0.381801 AAAAGTTGACGCAGCCACTG 59.618 50.0 0.00 0.0 34.12 3.66 R
2030 2726 0.391793 GCTTGACCCTCCAGTAGCAC 60.392 60.0 0.00 0.0 0.00 4.40 R
2585 3293 0.317269 GGTGAAGTGAACGACGTCGA 60.317 55.0 41.52 19.4 43.02 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.736097 TTATATCATATGGGTACAGTCCTTGT 57.264 34.615 2.13 0.00 43.96 3.16
30 31 5.975988 ATCATATGGGTACAGTCCTTGTT 57.024 39.130 2.13 0.00 41.29 2.83
31 32 5.097742 TCATATGGGTACAGTCCTTGTTG 57.902 43.478 2.13 0.00 41.29 3.33
32 33 4.780554 TCATATGGGTACAGTCCTTGTTGA 59.219 41.667 2.13 0.00 41.29 3.18
33 34 3.703001 ATGGGTACAGTCCTTGTTGAG 57.297 47.619 0.00 0.00 41.29 3.02
34 35 2.684943 TGGGTACAGTCCTTGTTGAGA 58.315 47.619 0.00 0.00 41.29 3.27
35 36 2.632996 TGGGTACAGTCCTTGTTGAGAG 59.367 50.000 0.00 0.00 41.29 3.20
36 37 2.897969 GGGTACAGTCCTTGTTGAGAGA 59.102 50.000 0.00 0.00 41.29 3.10
37 38 3.056465 GGGTACAGTCCTTGTTGAGAGAG 60.056 52.174 0.00 0.00 41.29 3.20
38 39 3.827302 GGTACAGTCCTTGTTGAGAGAGA 59.173 47.826 0.00 0.00 41.29 3.10
39 40 4.082463 GGTACAGTCCTTGTTGAGAGAGAG 60.082 50.000 0.00 0.00 41.29 3.20
40 41 3.571590 ACAGTCCTTGTTGAGAGAGAGT 58.428 45.455 0.00 0.00 36.31 3.24
41 42 3.964031 ACAGTCCTTGTTGAGAGAGAGTT 59.036 43.478 0.00 0.00 36.31 3.01
42 43 4.202202 ACAGTCCTTGTTGAGAGAGAGTTG 60.202 45.833 0.00 0.00 36.31 3.16
43 44 3.323403 AGTCCTTGTTGAGAGAGAGTTGG 59.677 47.826 0.00 0.00 0.00 3.77
44 45 2.634940 TCCTTGTTGAGAGAGAGTTGGG 59.365 50.000 0.00 0.00 0.00 4.12
45 46 2.634940 CCTTGTTGAGAGAGAGTTGGGA 59.365 50.000 0.00 0.00 0.00 4.37
46 47 3.306641 CCTTGTTGAGAGAGAGTTGGGAG 60.307 52.174 0.00 0.00 0.00 4.30
47 48 2.964209 TGTTGAGAGAGAGTTGGGAGT 58.036 47.619 0.00 0.00 0.00 3.85
48 49 2.894126 TGTTGAGAGAGAGTTGGGAGTC 59.106 50.000 0.00 0.00 0.00 3.36
49 50 3.161866 GTTGAGAGAGAGTTGGGAGTCT 58.838 50.000 0.00 0.00 38.28 3.24
57 58 3.582164 AGAGTTGGGAGTCTCTCAAACT 58.418 45.455 16.89 15.25 38.80 2.66
58 59 3.576550 AGAGTTGGGAGTCTCTCAAACTC 59.423 47.826 23.72 23.72 45.51 3.01
59 60 3.309296 AGTTGGGAGTCTCTCAAACTCA 58.691 45.455 16.89 0.00 38.80 3.41
60 61 3.323403 AGTTGGGAGTCTCTCAAACTCAG 59.677 47.826 16.89 0.00 38.80 3.35
61 62 1.620819 TGGGAGTCTCTCAAACTCAGC 59.379 52.381 0.00 0.00 44.03 4.26
62 63 1.066502 GGGAGTCTCTCAAACTCAGCC 60.067 57.143 0.00 0.00 44.03 4.85
63 64 1.403514 GGAGTCTCTCAAACTCAGCCG 60.404 57.143 0.00 0.00 44.03 5.52
64 65 0.037790 AGTCTCTCAAACTCAGCCGC 60.038 55.000 0.00 0.00 0.00 6.53
65 66 1.016653 GTCTCTCAAACTCAGCCGCC 61.017 60.000 0.00 0.00 0.00 6.13
66 67 1.188219 TCTCTCAAACTCAGCCGCCT 61.188 55.000 0.00 0.00 0.00 5.52
67 68 1.004560 TCTCAAACTCAGCCGCCTG 60.005 57.895 0.00 0.00 40.54 4.85
68 69 1.302033 CTCAAACTCAGCCGCCTGT 60.302 57.895 0.00 0.00 40.09 4.00
69 70 1.294659 CTCAAACTCAGCCGCCTGTC 61.295 60.000 0.00 0.00 40.09 3.51
70 71 2.032681 AAACTCAGCCGCCTGTCC 59.967 61.111 0.00 0.00 40.09 4.02
71 72 2.520536 AAACTCAGCCGCCTGTCCT 61.521 57.895 0.00 0.00 40.09 3.85
72 73 2.056906 AAACTCAGCCGCCTGTCCTT 62.057 55.000 0.00 0.00 40.09 3.36
73 74 2.056906 AACTCAGCCGCCTGTCCTTT 62.057 55.000 0.00 0.00 40.09 3.11
74 75 2.032528 TCAGCCGCCTGTCCTTTG 59.967 61.111 0.00 0.00 40.09 2.77
75 76 3.058160 CAGCCGCCTGTCCTTTGG 61.058 66.667 0.00 0.00 34.31 3.28
76 77 3.570212 AGCCGCCTGTCCTTTGGT 61.570 61.111 0.00 0.00 0.00 3.67
77 78 3.365265 GCCGCCTGTCCTTTGGTG 61.365 66.667 0.00 0.00 0.00 4.17
78 79 2.113139 CCGCCTGTCCTTTGGTGT 59.887 61.111 0.00 0.00 32.37 4.16
79 80 2.260869 CCGCCTGTCCTTTGGTGTG 61.261 63.158 0.00 0.00 32.37 3.82
80 81 1.227823 CGCCTGTCCTTTGGTGTGA 60.228 57.895 0.00 0.00 0.00 3.58
81 82 1.507141 CGCCTGTCCTTTGGTGTGAC 61.507 60.000 0.00 0.00 0.00 3.67
82 83 0.465460 GCCTGTCCTTTGGTGTGACA 60.465 55.000 0.00 0.00 37.45 3.58
83 84 2.021723 GCCTGTCCTTTGGTGTGACAA 61.022 52.381 0.00 0.00 38.45 3.18
84 85 1.676006 CCTGTCCTTTGGTGTGACAAC 59.324 52.381 0.00 0.00 38.45 3.32
85 86 2.364632 CTGTCCTTTGGTGTGACAACA 58.635 47.619 0.00 0.00 38.45 3.33
86 87 2.951642 CTGTCCTTTGGTGTGACAACAT 59.048 45.455 3.26 0.00 38.45 2.71
87 88 3.360867 TGTCCTTTGGTGTGACAACATT 58.639 40.909 3.26 0.00 38.92 2.71
88 89 3.130164 TGTCCTTTGGTGTGACAACATTG 59.870 43.478 3.26 0.00 38.92 2.82
89 90 2.692557 TCCTTTGGTGTGACAACATTGG 59.307 45.455 3.26 10.04 38.92 3.16
90 91 2.430332 CCTTTGGTGTGACAACATTGGT 59.570 45.455 3.26 0.00 38.92 3.67
91 92 3.446799 CTTTGGTGTGACAACATTGGTG 58.553 45.455 3.26 0.00 38.92 4.17
92 93 1.397672 TGGTGTGACAACATTGGTGG 58.602 50.000 0.00 0.00 38.92 4.61
93 94 1.341482 TGGTGTGACAACATTGGTGGT 60.341 47.619 0.00 0.00 38.92 4.16
94 95 2.092375 TGGTGTGACAACATTGGTGGTA 60.092 45.455 0.00 0.00 38.92 3.25
95 96 2.292292 GGTGTGACAACATTGGTGGTAC 59.708 50.000 6.65 5.26 38.92 3.34
96 97 2.946329 GTGTGACAACATTGGTGGTACA 59.054 45.455 6.65 7.80 38.92 2.90
97 98 3.568007 GTGTGACAACATTGGTGGTACAT 59.432 43.478 13.88 0.00 38.92 2.29
98 99 4.757657 GTGTGACAACATTGGTGGTACATA 59.242 41.667 13.88 4.55 38.92 2.29
99 100 4.757657 TGTGACAACATTGGTGGTACATAC 59.242 41.667 6.65 0.00 44.52 2.39
100 101 4.155280 GTGACAACATTGGTGGTACATACC 59.845 45.833 6.65 10.68 44.52 2.73
101 102 4.042311 TGACAACATTGGTGGTACATACCT 59.958 41.667 16.59 0.00 46.58 3.08
102 103 4.331968 ACAACATTGGTGGTACATACCTG 58.668 43.478 16.59 11.25 46.58 4.00
103 104 4.202524 ACAACATTGGTGGTACATACCTGT 60.203 41.667 16.59 11.74 46.58 4.00
104 105 4.216411 ACATTGGTGGTACATACCTGTC 57.784 45.455 16.59 0.96 46.58 3.51
105 106 3.585289 ACATTGGTGGTACATACCTGTCA 59.415 43.478 16.59 2.85 46.58 3.58
106 107 4.227300 ACATTGGTGGTACATACCTGTCAT 59.773 41.667 16.59 4.57 46.58 3.06
107 108 4.481368 TTGGTGGTACATACCTGTCATC 57.519 45.455 16.59 0.00 46.58 2.92
108 109 3.719871 TGGTGGTACATACCTGTCATCT 58.280 45.455 16.59 0.00 46.58 2.90
109 110 4.874199 TGGTGGTACATACCTGTCATCTA 58.126 43.478 16.59 0.00 46.58 1.98
110 111 5.274015 TGGTGGTACATACCTGTCATCTAA 58.726 41.667 16.59 0.00 46.58 2.10
111 112 5.903010 TGGTGGTACATACCTGTCATCTAAT 59.097 40.000 16.59 0.00 46.58 1.73
112 113 6.385759 TGGTGGTACATACCTGTCATCTAATT 59.614 38.462 16.59 0.00 46.58 1.40
113 114 6.929606 GGTGGTACATACCTGTCATCTAATTC 59.070 42.308 9.46 0.00 46.58 2.17
114 115 7.418597 GGTGGTACATACCTGTCATCTAATTCA 60.419 40.741 9.46 0.00 46.58 2.57
115 116 7.653713 GTGGTACATACCTGTCATCTAATTCAG 59.346 40.741 9.46 0.00 46.58 3.02
116 117 7.344612 TGGTACATACCTGTCATCTAATTCAGT 59.655 37.037 9.46 0.00 46.58 3.41
117 118 8.857098 GGTACATACCTGTCATCTAATTCAGTA 58.143 37.037 0.49 0.00 43.10 2.74
124 125 9.334947 ACCTGTCATCTAATTCAGTATTTCATG 57.665 33.333 0.00 0.00 0.00 3.07
125 126 8.288208 CCTGTCATCTAATTCAGTATTTCATGC 58.712 37.037 0.00 0.00 0.00 4.06
126 127 8.969260 TGTCATCTAATTCAGTATTTCATGCT 57.031 30.769 0.00 0.00 0.00 3.79
127 128 9.049523 TGTCATCTAATTCAGTATTTCATGCTC 57.950 33.333 0.00 0.00 0.00 4.26
128 129 8.219769 GTCATCTAATTCAGTATTTCATGCTCG 58.780 37.037 0.00 0.00 0.00 5.03
129 130 8.143835 TCATCTAATTCAGTATTTCATGCTCGA 58.856 33.333 0.00 0.00 0.00 4.04
130 131 8.768019 CATCTAATTCAGTATTTCATGCTCGAA 58.232 33.333 0.00 0.00 0.00 3.71
131 132 8.131455 TCTAATTCAGTATTTCATGCTCGAAC 57.869 34.615 0.00 0.00 0.00 3.95
132 133 6.741992 AATTCAGTATTTCATGCTCGAACA 57.258 33.333 0.00 0.00 0.00 3.18
133 134 6.741992 ATTCAGTATTTCATGCTCGAACAA 57.258 33.333 0.00 0.00 0.00 2.83
134 135 6.552859 TTCAGTATTTCATGCTCGAACAAA 57.447 33.333 0.00 0.00 0.00 2.83
135 136 6.169419 TCAGTATTTCATGCTCGAACAAAG 57.831 37.500 0.00 0.00 0.00 2.77
136 137 4.790140 CAGTATTTCATGCTCGAACAAAGC 59.210 41.667 0.00 0.00 40.26 3.51
142 143 2.404265 TGCTCGAACAAAGCACATTG 57.596 45.000 0.00 0.00 44.51 2.82
143 144 1.946081 TGCTCGAACAAAGCACATTGA 59.054 42.857 4.22 0.00 44.51 2.57
144 145 2.357323 TGCTCGAACAAAGCACATTGAA 59.643 40.909 4.22 0.00 44.51 2.69
145 146 2.975851 GCTCGAACAAAGCACATTGAAG 59.024 45.455 4.22 0.00 39.61 3.02
146 147 3.548818 GCTCGAACAAAGCACATTGAAGT 60.549 43.478 4.22 0.00 39.61 3.01
147 148 4.601019 CTCGAACAAAGCACATTGAAGTT 58.399 39.130 4.22 0.00 34.38 2.66
148 149 4.350346 TCGAACAAAGCACATTGAAGTTG 58.650 39.130 4.22 0.00 34.38 3.16
149 150 4.095632 TCGAACAAAGCACATTGAAGTTGA 59.904 37.500 4.22 0.00 34.38 3.18
150 151 4.204978 CGAACAAAGCACATTGAAGTTGAC 59.795 41.667 4.22 0.00 34.38 3.18
151 152 4.989279 ACAAAGCACATTGAAGTTGACT 57.011 36.364 4.22 0.00 34.38 3.41
152 153 6.449635 AACAAAGCACATTGAAGTTGACTA 57.550 33.333 4.22 0.00 34.38 2.59
153 154 6.639632 ACAAAGCACATTGAAGTTGACTAT 57.360 33.333 4.22 0.00 34.38 2.12
154 155 6.672147 ACAAAGCACATTGAAGTTGACTATC 58.328 36.000 4.22 0.00 34.38 2.08
155 156 6.262944 ACAAAGCACATTGAAGTTGACTATCA 59.737 34.615 4.22 0.00 34.38 2.15
156 157 5.869753 AGCACATTGAAGTTGACTATCAC 57.130 39.130 0.00 0.00 0.00 3.06
157 158 5.555017 AGCACATTGAAGTTGACTATCACT 58.445 37.500 0.00 0.00 0.00 3.41
158 159 6.000219 AGCACATTGAAGTTGACTATCACTT 59.000 36.000 0.00 0.00 0.00 3.16
159 160 6.488006 AGCACATTGAAGTTGACTATCACTTT 59.512 34.615 0.00 0.00 0.00 2.66
160 161 6.580041 GCACATTGAAGTTGACTATCACTTTG 59.420 38.462 0.00 0.00 0.00 2.77
161 162 7.642669 CACATTGAAGTTGACTATCACTTTGT 58.357 34.615 0.00 0.00 0.00 2.83
162 163 7.588854 CACATTGAAGTTGACTATCACTTTGTG 59.411 37.037 0.00 0.00 29.26 3.33
163 164 7.498900 ACATTGAAGTTGACTATCACTTTGTGA 59.501 33.333 2.77 2.77 46.90 3.58
164 165 6.844696 TGAAGTTGACTATCACTTTGTGAC 57.155 37.500 2.31 0.00 45.65 3.67
165 166 6.345298 TGAAGTTGACTATCACTTTGTGACA 58.655 36.000 2.31 0.00 45.65 3.58
166 167 6.479990 TGAAGTTGACTATCACTTTGTGACAG 59.520 38.462 4.67 4.67 45.65 3.51
167 168 6.161855 AGTTGACTATCACTTTGTGACAGA 57.838 37.500 12.18 0.00 45.65 3.41
168 169 6.582636 AGTTGACTATCACTTTGTGACAGAA 58.417 36.000 12.18 0.00 45.65 3.02
169 170 6.480320 AGTTGACTATCACTTTGTGACAGAAC 59.520 38.462 12.18 7.46 45.65 3.01
170 171 5.912892 TGACTATCACTTTGTGACAGAACA 58.087 37.500 12.18 8.92 45.65 3.18
171 172 6.524734 TGACTATCACTTTGTGACAGAACAT 58.475 36.000 12.18 0.00 45.65 2.71
172 173 6.424812 TGACTATCACTTTGTGACAGAACATG 59.575 38.462 12.18 0.00 45.65 3.21
173 174 6.291377 ACTATCACTTTGTGACAGAACATGT 58.709 36.000 12.18 0.00 45.65 3.21
174 175 6.767902 ACTATCACTTTGTGACAGAACATGTT 59.232 34.615 11.78 11.78 45.65 2.71
175 176 5.233957 TCACTTTGTGACAGAACATGTTG 57.766 39.130 17.58 5.83 44.17 3.33
176 177 3.792956 CACTTTGTGACAGAACATGTTGC 59.207 43.478 17.58 7.82 44.17 4.17
177 178 3.443329 ACTTTGTGACAGAACATGTTGCA 59.557 39.130 17.58 5.91 44.17 4.08
178 179 3.419264 TTGTGACAGAACATGTTGCAC 57.581 42.857 17.58 17.23 44.17 4.57
179 180 2.363683 TGTGACAGAACATGTTGCACA 58.636 42.857 17.58 19.37 44.17 4.57
180 181 2.355444 TGTGACAGAACATGTTGCACAG 59.645 45.455 17.58 1.07 44.17 3.66
181 182 2.613595 GTGACAGAACATGTTGCACAGA 59.386 45.455 17.58 0.00 44.17 3.41
182 183 3.065233 GTGACAGAACATGTTGCACAGAA 59.935 43.478 17.58 0.00 44.17 3.02
183 184 3.693578 TGACAGAACATGTTGCACAGAAA 59.306 39.130 17.58 0.00 44.17 2.52
184 185 4.032703 ACAGAACATGTTGCACAGAAAC 57.967 40.909 17.58 0.00 39.96 2.78
185 186 3.696051 ACAGAACATGTTGCACAGAAACT 59.304 39.130 17.58 0.00 39.96 2.66
186 187 4.881273 ACAGAACATGTTGCACAGAAACTA 59.119 37.500 17.58 0.00 39.96 2.24
187 188 5.207768 CAGAACATGTTGCACAGAAACTAC 58.792 41.667 17.58 0.00 0.00 2.73
188 189 5.008019 CAGAACATGTTGCACAGAAACTACT 59.992 40.000 17.58 0.00 0.00 2.57
189 190 5.590259 AGAACATGTTGCACAGAAACTACTT 59.410 36.000 17.58 0.00 0.00 2.24
190 191 5.424121 ACATGTTGCACAGAAACTACTTC 57.576 39.130 0.00 0.00 0.00 3.01
191 192 4.881273 ACATGTTGCACAGAAACTACTTCA 59.119 37.500 0.00 0.00 36.40 3.02
192 193 5.532406 ACATGTTGCACAGAAACTACTTCAT 59.468 36.000 0.00 0.00 36.40 2.57
193 194 6.710295 ACATGTTGCACAGAAACTACTTCATA 59.290 34.615 0.00 0.00 36.40 2.15
194 195 7.391554 ACATGTTGCACAGAAACTACTTCATAT 59.608 33.333 0.00 0.00 36.40 1.78
195 196 7.364522 TGTTGCACAGAAACTACTTCATATC 57.635 36.000 0.00 0.00 36.40 1.63
196 197 6.934083 TGTTGCACAGAAACTACTTCATATCA 59.066 34.615 0.00 0.00 36.40 2.15
197 198 7.443879 TGTTGCACAGAAACTACTTCATATCAA 59.556 33.333 0.00 0.00 36.40 2.57
198 199 7.601073 TGCACAGAAACTACTTCATATCAAG 57.399 36.000 0.00 0.00 36.40 3.02
199 200 7.161404 TGCACAGAAACTACTTCATATCAAGT 58.839 34.615 0.00 0.00 39.94 3.16
200 201 7.661437 TGCACAGAAACTACTTCATATCAAGTT 59.339 33.333 0.00 0.00 37.75 2.66
201 202 8.171840 GCACAGAAACTACTTCATATCAAGTTC 58.828 37.037 0.00 0.00 37.75 3.01
202 203 9.208022 CACAGAAACTACTTCATATCAAGTTCA 57.792 33.333 0.00 0.00 37.75 3.18
203 204 9.209175 ACAGAAACTACTTCATATCAAGTTCAC 57.791 33.333 0.00 0.00 37.75 3.18
204 205 8.660373 CAGAAACTACTTCATATCAAGTTCACC 58.340 37.037 0.00 0.00 37.75 4.02
205 206 8.598041 AGAAACTACTTCATATCAAGTTCACCT 58.402 33.333 0.00 0.00 37.75 4.00
206 207 8.779354 AAACTACTTCATATCAAGTTCACCTC 57.221 34.615 0.00 0.00 37.75 3.85
207 208 6.879400 ACTACTTCATATCAAGTTCACCTCC 58.121 40.000 0.00 0.00 37.75 4.30
208 209 6.670027 ACTACTTCATATCAAGTTCACCTCCT 59.330 38.462 0.00 0.00 37.75 3.69
209 210 5.983540 ACTTCATATCAAGTTCACCTCCTC 58.016 41.667 0.00 0.00 32.34 3.71
210 211 5.723887 ACTTCATATCAAGTTCACCTCCTCT 59.276 40.000 0.00 0.00 32.34 3.69
211 212 6.897966 ACTTCATATCAAGTTCACCTCCTCTA 59.102 38.462 0.00 0.00 32.34 2.43
212 213 7.400339 ACTTCATATCAAGTTCACCTCCTCTAA 59.600 37.037 0.00 0.00 32.34 2.10
213 214 7.733773 TCATATCAAGTTCACCTCCTCTAAA 57.266 36.000 0.00 0.00 0.00 1.85
214 215 8.146053 TCATATCAAGTTCACCTCCTCTAAAA 57.854 34.615 0.00 0.00 0.00 1.52
215 216 8.602424 TCATATCAAGTTCACCTCCTCTAAAAA 58.398 33.333 0.00 0.00 0.00 1.94
216 217 9.401058 CATATCAAGTTCACCTCCTCTAAAAAT 57.599 33.333 0.00 0.00 0.00 1.82
217 218 7.929941 ATCAAGTTCACCTCCTCTAAAAATC 57.070 36.000 0.00 0.00 0.00 2.17
218 219 6.837312 TCAAGTTCACCTCCTCTAAAAATCA 58.163 36.000 0.00 0.00 0.00 2.57
219 220 7.287061 TCAAGTTCACCTCCTCTAAAAATCAA 58.713 34.615 0.00 0.00 0.00 2.57
220 221 7.228706 TCAAGTTCACCTCCTCTAAAAATCAAC 59.771 37.037 0.00 0.00 0.00 3.18
221 222 6.842676 AGTTCACCTCCTCTAAAAATCAACT 58.157 36.000 0.00 0.00 0.00 3.16
222 223 7.290813 AGTTCACCTCCTCTAAAAATCAACTT 58.709 34.615 0.00 0.00 0.00 2.66
223 224 7.229506 AGTTCACCTCCTCTAAAAATCAACTTG 59.770 37.037 0.00 0.00 0.00 3.16
224 225 5.473504 TCACCTCCTCTAAAAATCAACTTGC 59.526 40.000 0.00 0.00 0.00 4.01
225 226 5.474876 CACCTCCTCTAAAAATCAACTTGCT 59.525 40.000 0.00 0.00 0.00 3.91
226 227 6.655003 CACCTCCTCTAAAAATCAACTTGCTA 59.345 38.462 0.00 0.00 0.00 3.49
227 228 7.174946 CACCTCCTCTAAAAATCAACTTGCTAA 59.825 37.037 0.00 0.00 0.00 3.09
228 229 7.175119 ACCTCCTCTAAAAATCAACTTGCTAAC 59.825 37.037 0.00 0.00 0.00 2.34
229 230 7.174946 CCTCCTCTAAAAATCAACTTGCTAACA 59.825 37.037 0.00 0.00 0.00 2.41
230 231 8.635765 TCCTCTAAAAATCAACTTGCTAACAT 57.364 30.769 0.00 0.00 0.00 2.71
231 232 8.730680 TCCTCTAAAAATCAACTTGCTAACATC 58.269 33.333 0.00 0.00 0.00 3.06
232 233 8.734386 CCTCTAAAAATCAACTTGCTAACATCT 58.266 33.333 0.00 0.00 0.00 2.90
235 236 9.897744 CTAAAAATCAACTTGCTAACATCTTCA 57.102 29.630 0.00 0.00 0.00 3.02
236 237 8.579682 AAAAATCAACTTGCTAACATCTTCAC 57.420 30.769 0.00 0.00 0.00 3.18
237 238 4.990543 TCAACTTGCTAACATCTTCACG 57.009 40.909 0.00 0.00 0.00 4.35
238 239 4.627058 TCAACTTGCTAACATCTTCACGA 58.373 39.130 0.00 0.00 0.00 4.35
239 240 5.053811 TCAACTTGCTAACATCTTCACGAA 58.946 37.500 0.00 0.00 0.00 3.85
240 241 5.177511 TCAACTTGCTAACATCTTCACGAAG 59.822 40.000 0.08 0.08 39.71 3.79
241 242 3.433615 ACTTGCTAACATCTTCACGAAGC 59.566 43.478 1.75 0.00 38.28 3.86
242 243 2.346803 TGCTAACATCTTCACGAAGCC 58.653 47.619 1.75 0.00 38.28 4.35
243 244 2.028112 TGCTAACATCTTCACGAAGCCT 60.028 45.455 1.75 0.00 38.28 4.58
244 245 2.605366 GCTAACATCTTCACGAAGCCTC 59.395 50.000 1.75 0.00 38.28 4.70
245 246 3.677424 GCTAACATCTTCACGAAGCCTCT 60.677 47.826 1.75 0.00 38.28 3.69
246 247 4.440250 GCTAACATCTTCACGAAGCCTCTA 60.440 45.833 1.75 0.00 38.28 2.43
247 248 4.537135 AACATCTTCACGAAGCCTCTAA 57.463 40.909 1.75 0.00 38.28 2.10
248 249 3.851098 ACATCTTCACGAAGCCTCTAAC 58.149 45.455 1.75 0.00 38.28 2.34
249 250 2.631418 TCTTCACGAAGCCTCTAACG 57.369 50.000 1.75 0.00 38.28 3.18
250 251 0.992802 CTTCACGAAGCCTCTAACGC 59.007 55.000 0.00 0.00 0.00 4.84
251 252 0.315886 TTCACGAAGCCTCTAACGCA 59.684 50.000 0.00 0.00 0.00 5.24
252 253 0.109272 TCACGAAGCCTCTAACGCAG 60.109 55.000 0.00 0.00 0.00 5.18
253 254 1.446272 ACGAAGCCTCTAACGCAGC 60.446 57.895 0.00 0.00 0.00 5.25
254 255 2.167861 CGAAGCCTCTAACGCAGCC 61.168 63.158 0.00 0.00 0.00 4.85
255 256 1.219393 GAAGCCTCTAACGCAGCCT 59.781 57.895 0.00 0.00 0.00 4.58
256 257 0.808060 GAAGCCTCTAACGCAGCCTC 60.808 60.000 0.00 0.00 0.00 4.70
257 258 1.544825 AAGCCTCTAACGCAGCCTCA 61.545 55.000 0.00 0.00 0.00 3.86
258 259 1.520342 GCCTCTAACGCAGCCTCAG 60.520 63.158 0.00 0.00 0.00 3.35
259 260 1.893786 CCTCTAACGCAGCCTCAGT 59.106 57.895 0.00 0.00 0.00 3.41
260 261 0.247736 CCTCTAACGCAGCCTCAGTT 59.752 55.000 0.00 0.00 0.00 3.16
261 262 1.338200 CCTCTAACGCAGCCTCAGTTT 60.338 52.381 0.00 0.00 0.00 2.66
262 263 2.094182 CCTCTAACGCAGCCTCAGTTTA 60.094 50.000 0.00 0.00 0.00 2.01
263 264 3.430929 CCTCTAACGCAGCCTCAGTTTAT 60.431 47.826 0.00 0.00 0.00 1.40
264 265 4.202121 CCTCTAACGCAGCCTCAGTTTATA 60.202 45.833 0.00 0.00 0.00 0.98
265 266 4.933330 TCTAACGCAGCCTCAGTTTATAG 58.067 43.478 0.00 0.00 0.00 1.31
266 267 2.604046 ACGCAGCCTCAGTTTATAGG 57.396 50.000 0.00 0.00 35.86 2.57
267 268 1.831736 ACGCAGCCTCAGTTTATAGGT 59.168 47.619 0.00 0.00 35.16 3.08
268 269 2.236395 ACGCAGCCTCAGTTTATAGGTT 59.764 45.455 0.00 0.00 35.16 3.50
269 270 2.609459 CGCAGCCTCAGTTTATAGGTTG 59.391 50.000 0.00 0.00 44.42 3.77
270 271 3.610911 GCAGCCTCAGTTTATAGGTTGT 58.389 45.455 7.00 0.00 43.73 3.32
271 272 4.679639 CGCAGCCTCAGTTTATAGGTTGTA 60.680 45.833 7.00 0.00 43.73 2.41
272 273 4.811557 GCAGCCTCAGTTTATAGGTTGTAG 59.188 45.833 7.00 0.00 43.73 2.74
273 274 5.360591 CAGCCTCAGTTTATAGGTTGTAGG 58.639 45.833 0.00 0.00 38.78 3.18
274 275 4.127907 GCCTCAGTTTATAGGTTGTAGGC 58.872 47.826 0.00 0.00 40.11 3.93
275 276 4.369182 CCTCAGTTTATAGGTTGTAGGCG 58.631 47.826 0.00 0.00 0.00 5.52
276 277 3.788937 TCAGTTTATAGGTTGTAGGCGC 58.211 45.455 0.00 0.00 0.00 6.53
277 278 3.196039 TCAGTTTATAGGTTGTAGGCGCA 59.804 43.478 10.83 0.00 0.00 6.09
278 279 3.936453 CAGTTTATAGGTTGTAGGCGCAA 59.064 43.478 10.83 0.00 0.00 4.85
279 280 4.574828 CAGTTTATAGGTTGTAGGCGCAAT 59.425 41.667 10.83 0.00 0.00 3.56
280 281 4.814771 AGTTTATAGGTTGTAGGCGCAATC 59.185 41.667 10.83 0.00 0.00 2.67
281 282 4.682778 TTATAGGTTGTAGGCGCAATCT 57.317 40.909 10.83 13.42 41.99 2.40
282 283 3.560636 ATAGGTTGTAGGCGCAATCTT 57.439 42.857 10.83 2.88 40.06 2.40
283 284 4.682778 ATAGGTTGTAGGCGCAATCTTA 57.317 40.909 10.83 3.93 40.06 2.10
284 285 3.343941 AGGTTGTAGGCGCAATCTTAA 57.656 42.857 10.83 0.00 36.50 1.85
285 286 3.007635 AGGTTGTAGGCGCAATCTTAAC 58.992 45.455 10.83 6.34 36.50 2.01
286 287 2.745281 GGTTGTAGGCGCAATCTTAACA 59.255 45.455 10.83 0.00 0.00 2.41
287 288 3.377172 GGTTGTAGGCGCAATCTTAACAT 59.623 43.478 10.83 0.00 0.00 2.71
288 289 4.342772 GTTGTAGGCGCAATCTTAACATG 58.657 43.478 10.83 0.00 0.00 3.21
289 290 3.867857 TGTAGGCGCAATCTTAACATGA 58.132 40.909 10.83 0.00 0.00 3.07
290 291 4.450976 TGTAGGCGCAATCTTAACATGAT 58.549 39.130 10.83 0.00 0.00 2.45
291 292 4.881273 TGTAGGCGCAATCTTAACATGATT 59.119 37.500 10.83 0.00 34.82 2.57
292 293 4.989279 AGGCGCAATCTTAACATGATTT 57.011 36.364 10.83 0.00 32.47 2.17
293 294 4.675510 AGGCGCAATCTTAACATGATTTG 58.324 39.130 10.83 0.00 32.47 2.32
294 295 4.158394 AGGCGCAATCTTAACATGATTTGT 59.842 37.500 10.83 0.00 41.53 2.83
295 296 5.356751 AGGCGCAATCTTAACATGATTTGTA 59.643 36.000 10.83 0.00 37.68 2.41
296 297 5.455525 GGCGCAATCTTAACATGATTTGTAC 59.544 40.000 10.83 0.00 37.68 2.90
297 298 5.455525 GCGCAATCTTAACATGATTTGTACC 59.544 40.000 0.30 0.00 37.68 3.34
298 299 6.677920 GCGCAATCTTAACATGATTTGTACCT 60.678 38.462 0.30 0.00 37.68 3.08
299 300 7.250569 CGCAATCTTAACATGATTTGTACCTT 58.749 34.615 0.00 0.00 37.68 3.50
300 301 8.394877 CGCAATCTTAACATGATTTGTACCTTA 58.605 33.333 0.00 0.00 37.68 2.69
301 302 9.722056 GCAATCTTAACATGATTTGTACCTTAG 57.278 33.333 0.00 0.00 37.68 2.18
331 332 7.761038 AGTTAAGATTAAAGGAGGTTGTTGG 57.239 36.000 0.00 0.00 0.00 3.77
332 333 6.719829 AGTTAAGATTAAAGGAGGTTGTTGGG 59.280 38.462 0.00 0.00 0.00 4.12
333 334 3.431415 AGATTAAAGGAGGTTGTTGGGC 58.569 45.455 0.00 0.00 0.00 5.36
334 335 3.076032 AGATTAAAGGAGGTTGTTGGGCT 59.924 43.478 0.00 0.00 0.00 5.19
335 336 2.286365 TAAAGGAGGTTGTTGGGCTG 57.714 50.000 0.00 0.00 0.00 4.85
336 337 0.261696 AAAGGAGGTTGTTGGGCTGT 59.738 50.000 0.00 0.00 0.00 4.40
337 338 0.468029 AAGGAGGTTGTTGGGCTGTG 60.468 55.000 0.00 0.00 0.00 3.66
338 339 1.152756 GGAGGTTGTTGGGCTGTGT 60.153 57.895 0.00 0.00 0.00 3.72
339 340 0.755327 GGAGGTTGTTGGGCTGTGTT 60.755 55.000 0.00 0.00 0.00 3.32
340 341 1.111277 GAGGTTGTTGGGCTGTGTTT 58.889 50.000 0.00 0.00 0.00 2.83
341 342 2.303175 GAGGTTGTTGGGCTGTGTTTA 58.697 47.619 0.00 0.00 0.00 2.01
342 343 2.028876 AGGTTGTTGGGCTGTGTTTAC 58.971 47.619 0.00 0.00 0.00 2.01
343 344 1.751924 GGTTGTTGGGCTGTGTTTACA 59.248 47.619 0.00 0.00 35.08 2.41
344 345 2.364002 GGTTGTTGGGCTGTGTTTACAT 59.636 45.455 0.00 0.00 35.97 2.29
345 346 3.570550 GGTTGTTGGGCTGTGTTTACATA 59.429 43.478 0.00 0.00 35.97 2.29
346 347 4.219725 GGTTGTTGGGCTGTGTTTACATAT 59.780 41.667 0.00 0.00 35.97 1.78
347 348 5.160641 GTTGTTGGGCTGTGTTTACATATG 58.839 41.667 0.00 0.00 35.97 1.78
348 349 4.657013 TGTTGGGCTGTGTTTACATATGA 58.343 39.130 10.38 0.00 35.97 2.15
349 350 4.457603 TGTTGGGCTGTGTTTACATATGAC 59.542 41.667 10.38 0.00 35.97 3.06
350 351 4.568072 TGGGCTGTGTTTACATATGACT 57.432 40.909 10.38 0.00 35.97 3.41
351 352 4.917385 TGGGCTGTGTTTACATATGACTT 58.083 39.130 10.38 0.00 35.97 3.01
352 353 5.321102 TGGGCTGTGTTTACATATGACTTT 58.679 37.500 10.38 0.00 35.97 2.66
353 354 5.772672 TGGGCTGTGTTTACATATGACTTTT 59.227 36.000 10.38 0.00 35.97 2.27
354 355 6.092748 GGGCTGTGTTTACATATGACTTTTG 58.907 40.000 10.38 0.00 35.97 2.44
355 356 6.294508 GGGCTGTGTTTACATATGACTTTTGT 60.295 38.462 10.38 0.00 35.97 2.83
356 357 7.094549 GGGCTGTGTTTACATATGACTTTTGTA 60.095 37.037 10.38 0.00 35.97 2.41
357 358 8.458843 GGCTGTGTTTACATATGACTTTTGTAT 58.541 33.333 10.38 0.00 35.97 2.29
429 430 6.425210 TGAGATAGTCACATCCATTAAGGG 57.575 41.667 0.00 0.00 38.24 3.95
430 431 5.905331 TGAGATAGTCACATCCATTAAGGGT 59.095 40.000 5.98 0.00 38.24 4.34
437 438 2.213499 CATCCATTAAGGGTGTCGAGC 58.787 52.381 5.98 0.00 43.99 5.03
438 439 1.271856 TCCATTAAGGGTGTCGAGCA 58.728 50.000 5.98 0.00 38.24 4.26
439 440 1.207089 TCCATTAAGGGTGTCGAGCAG 59.793 52.381 5.98 0.00 38.24 4.24
440 441 1.066143 CCATTAAGGGTGTCGAGCAGT 60.066 52.381 0.00 0.00 0.00 4.40
441 442 2.615493 CCATTAAGGGTGTCGAGCAGTT 60.615 50.000 0.00 0.00 0.00 3.16
442 443 2.922740 TTAAGGGTGTCGAGCAGTTT 57.077 45.000 0.00 0.00 0.00 2.66
443 444 2.163818 TAAGGGTGTCGAGCAGTTTG 57.836 50.000 0.00 0.00 0.00 2.93
444 445 0.535102 AAGGGTGTCGAGCAGTTTGG 60.535 55.000 0.00 0.00 0.00 3.28
445 446 2.617274 GGGTGTCGAGCAGTTTGGC 61.617 63.158 0.00 0.00 0.00 4.52
446 447 1.891919 GGTGTCGAGCAGTTTGGCA 60.892 57.895 0.00 0.00 35.83 4.92
447 448 1.571460 GTGTCGAGCAGTTTGGCAG 59.429 57.895 0.00 0.00 35.83 4.85
448 449 0.880278 GTGTCGAGCAGTTTGGCAGA 60.880 55.000 0.00 0.00 35.83 4.26
449 450 0.880278 TGTCGAGCAGTTTGGCAGAC 60.880 55.000 0.00 0.00 41.15 3.51
450 451 1.301716 TCGAGCAGTTTGGCAGACC 60.302 57.895 4.31 0.00 35.83 3.85
503 504 4.906618 TCTTGATTTTCACCCTGGTAGTC 58.093 43.478 0.00 0.00 0.00 2.59
504 505 3.328382 TGATTTTCACCCTGGTAGTCG 57.672 47.619 0.00 0.00 0.00 4.18
525 527 3.678548 CGCGGTCTTTAAATAGGCCTATC 59.321 47.826 25.60 10.95 37.78 2.08
539 547 0.179034 CCTATCTCCTGGCTGCCAAC 60.179 60.000 23.51 0.00 30.80 3.77
544 552 2.436646 CCTGGCTGCCAACGTAGG 60.437 66.667 23.51 15.85 30.80 3.18
547 555 2.345991 GGCTGCCAACGTAGGACA 59.654 61.111 15.17 0.00 0.00 4.02
550 558 1.671742 CTGCCAACGTAGGACAGGT 59.328 57.895 0.00 0.00 32.61 4.00
553 561 1.903860 TGCCAACGTAGGACAGGTTAT 59.096 47.619 0.00 0.00 33.56 1.89
556 564 4.056050 GCCAACGTAGGACAGGTTATATG 58.944 47.826 0.00 0.00 33.56 1.78
567 575 6.069029 AGGACAGGTTATATGTAGCCCTTTTT 60.069 38.462 0.00 0.00 31.98 1.94
599 608 9.777297 ACCATTTTTACAGTGCAAAAGAAATAT 57.223 25.926 1.69 0.00 0.00 1.28
738 754 1.055849 GGTGGGCAGGGATTTTGTTT 58.944 50.000 0.00 0.00 0.00 2.83
739 755 1.419762 GGTGGGCAGGGATTTTGTTTT 59.580 47.619 0.00 0.00 0.00 2.43
740 756 2.549992 GGTGGGCAGGGATTTTGTTTTC 60.550 50.000 0.00 0.00 0.00 2.29
1571 1739 0.741221 GTGACAGACGGAGCATTCCC 60.741 60.000 0.00 0.00 40.67 3.97
1574 1742 1.194781 ACAGACGGAGCATTCCCAGT 61.195 55.000 0.00 0.00 40.67 4.00
1610 1784 2.401583 TCATGCACCATTCGTAGCTT 57.598 45.000 0.00 0.00 0.00 3.74
1686 1896 3.370978 TGCTACGTTTAGAGAGCAAATGC 59.629 43.478 5.98 0.00 38.63 3.56
1765 2163 2.933495 TCGTCACATGTAGGTGTAGC 57.067 50.000 0.00 0.00 39.76 3.58
1772 2170 2.159282 ACATGTAGGTGTAGCGTAGTGC 60.159 50.000 0.00 0.00 46.98 4.40
1861 2263 6.507958 TCTCAATTATTGCAATCGGTTTCA 57.492 33.333 16.86 0.00 0.00 2.69
1892 2585 4.461198 TCTTTTGGTCAGGAGAAGGAAAC 58.539 43.478 0.00 0.00 0.00 2.78
1922 2618 1.144057 GAAGACATCCACCGGCGAT 59.856 57.895 9.30 0.00 0.00 4.58
2584 3292 2.336554 CACTGAGGTGAAAATTGCCG 57.663 50.000 0.00 0.00 45.61 5.69
2585 3293 1.608590 CACTGAGGTGAAAATTGCCGT 59.391 47.619 0.00 0.00 45.61 5.68
2586 3294 1.880027 ACTGAGGTGAAAATTGCCGTC 59.120 47.619 0.00 0.00 0.00 4.79
2587 3295 0.871722 TGAGGTGAAAATTGCCGTCG 59.128 50.000 0.00 0.00 0.00 5.12
2588 3296 1.153353 GAGGTGAAAATTGCCGTCGA 58.847 50.000 0.00 0.00 0.00 4.20
2589 3297 0.872388 AGGTGAAAATTGCCGTCGAC 59.128 50.000 5.18 5.18 0.00 4.20
2590 3298 0.452122 GGTGAAAATTGCCGTCGACG 60.452 55.000 30.33 30.33 39.44 5.12
2591 3299 0.233848 GTGAAAATTGCCGTCGACGT 59.766 50.000 33.49 15.67 37.74 4.34
2592 3300 0.509499 TGAAAATTGCCGTCGACGTC 59.491 50.000 33.49 24.43 37.74 4.34
2593 3301 0.515717 GAAAATTGCCGTCGACGTCG 60.516 55.000 33.49 31.30 41.45 5.12
2692 3405 7.138081 CACTGTGTGCAACTTTAATATGTTCA 58.862 34.615 0.00 0.00 38.04 3.18
2828 3589 1.301479 GACAACGAGCGGTCCCTTT 60.301 57.895 9.39 0.00 0.00 3.11
2967 3728 4.873810 TTGTGCACGGCAGGCAGT 62.874 61.111 13.13 0.00 42.85 4.40
2972 3733 3.129502 CACGGCAGGCAGTGATGG 61.130 66.667 17.74 0.00 43.09 3.51
3111 3876 6.208994 ACCTTCTATACGCCTCTAAATCGATT 59.791 38.462 4.39 4.39 0.00 3.34
3114 3879 6.609533 TCTATACGCCTCTAAATCGATTGAC 58.390 40.000 12.25 0.00 0.00 3.18
3127 3892 9.825972 CTAAATCGATTGACATACACAACTTTT 57.174 29.630 12.25 0.00 0.00 2.27
3128 3893 8.728088 AAATCGATTGACATACACAACTTTTC 57.272 30.769 12.25 0.00 0.00 2.29
3131 3896 6.367695 TCGATTGACATACACAACTTTTCGAT 59.632 34.615 0.00 0.00 33.40 3.59
3132 3897 6.678663 CGATTGACATACACAACTTTTCGATC 59.321 38.462 0.00 0.00 31.90 3.69
3170 3935 2.824880 CCACCAAGACCGGGTTGGA 61.825 63.158 33.37 0.00 46.53 3.53
3171 3936 1.302511 CACCAAGACCGGGTTGGAG 60.303 63.158 33.37 25.34 46.53 3.86
3172 3937 1.768888 ACCAAGACCGGGTTGGAGT 60.769 57.895 33.37 16.72 46.53 3.85
3173 3938 1.302511 CCAAGACCGGGTTGGAGTG 60.303 63.158 26.38 6.33 46.53 3.51
3174 3939 1.966451 CAAGACCGGGTTGGAGTGC 60.966 63.158 6.32 0.00 42.00 4.40
3175 3940 3.530910 AAGACCGGGTTGGAGTGCG 62.531 63.158 6.32 0.00 42.00 5.34
3176 3941 3.998672 GACCGGGTTGGAGTGCGA 61.999 66.667 6.32 0.00 42.00 5.10
3177 3942 3.524648 GACCGGGTTGGAGTGCGAA 62.525 63.158 6.32 0.00 42.00 4.70
3178 3943 3.047877 CCGGGTTGGAGTGCGAAC 61.048 66.667 0.00 0.00 42.00 3.95
3181 3946 2.029964 GGTTGGAGTGCGAACCGA 59.970 61.111 0.00 0.00 41.93 4.69
3253 4018 0.179097 GAGGCTTCACATCCCTCGAC 60.179 60.000 0.00 0.00 36.17 4.20
3254 4019 1.519455 GGCTTCACATCCCTCGACG 60.519 63.158 0.00 0.00 0.00 5.12
3274 4039 2.840102 CCTACGGCTCCTCCCCTG 60.840 72.222 0.00 0.00 0.00 4.45
3281 4046 2.445654 CTCCTCCCCTGCTCCTCC 60.446 72.222 0.00 0.00 0.00 4.30
3361 4126 1.002544 CGGAAGGGGCATCTAGATTCC 59.997 57.143 12.58 12.58 34.23 3.01
3373 4138 5.048434 GCATCTAGATTCCCTGGTAAATTGC 60.048 44.000 1.33 0.00 0.00 3.56
3390 4155 3.730761 CGTGCACAGAGCCAAGGC 61.731 66.667 18.64 2.02 44.83 4.35
3415 4180 4.884961 AGAGGTGGACTACTGATGGTAAT 58.115 43.478 0.00 0.00 0.00 1.89
3435 4200 0.815734 CATCGGTCCTAGTGGTTCGT 59.184 55.000 0.00 0.00 33.96 3.85
3441 4206 1.116536 TCCTAGTGGTTCGTGTGCCA 61.117 55.000 0.00 0.00 34.23 4.92
3443 4208 0.670546 CTAGTGGTTCGTGTGCCAGG 60.671 60.000 0.00 0.00 35.14 4.45
3444 4209 2.107041 TAGTGGTTCGTGTGCCAGGG 62.107 60.000 0.00 0.00 35.14 4.45
3483 4248 1.451028 GAGCTGGAGGTGGATGTGC 60.451 63.158 0.00 0.00 0.00 4.57
3511 4276 7.715265 GAGCATCTATAGTCGAATTTGGAAA 57.285 36.000 0.00 0.00 0.00 3.13
3514 4279 9.125026 AGCATCTATAGTCGAATTTGGAAAAAT 57.875 29.630 0.00 0.00 0.00 1.82
3534 4299 2.440247 GACCCCCTCAAATGCCCG 60.440 66.667 0.00 0.00 0.00 6.13
3540 4305 2.745884 CTCAAATGCCCGCGGACA 60.746 61.111 30.73 24.86 0.00 4.02
3541 4306 2.745884 TCAAATGCCCGCGGACAG 60.746 61.111 30.73 11.80 0.00 3.51
3542 4307 3.055719 CAAATGCCCGCGGACAGT 61.056 61.111 30.73 20.16 0.00 3.55
3543 4308 3.055719 AAATGCCCGCGGACAGTG 61.056 61.111 30.73 10.90 0.00 3.66
3544 4309 3.545124 AAATGCCCGCGGACAGTGA 62.545 57.895 30.73 0.00 0.00 3.41
3545 4310 2.819984 AAATGCCCGCGGACAGTGAT 62.820 55.000 30.73 2.71 0.00 3.06
3546 4311 2.819984 AATGCCCGCGGACAGTGATT 62.820 55.000 30.73 9.86 0.00 2.57
3547 4312 3.499737 GCCCGCGGACAGTGATTG 61.500 66.667 30.73 7.40 0.00 2.67
3548 4313 2.819595 CCCGCGGACAGTGATTGG 60.820 66.667 30.73 0.44 0.00 3.16
3549 4314 2.047274 CCGCGGACAGTGATTGGT 60.047 61.111 24.07 0.00 0.00 3.67
3550 4315 2.100631 CCGCGGACAGTGATTGGTC 61.101 63.158 24.07 0.00 0.00 4.02
3551 4316 1.374125 CGCGGACAGTGATTGGTCA 60.374 57.895 0.00 0.00 35.74 4.02
3560 4325 2.987413 GTGATTGGTCACGCATCAAA 57.013 45.000 0.00 0.00 44.71 2.69
3561 4326 2.584791 GTGATTGGTCACGCATCAAAC 58.415 47.619 0.00 0.00 44.71 2.93
3562 4327 2.226437 GTGATTGGTCACGCATCAAACT 59.774 45.455 0.00 0.00 44.71 2.66
3563 4328 2.884012 TGATTGGTCACGCATCAAACTT 59.116 40.909 0.00 0.00 0.00 2.66
3564 4329 4.068599 TGATTGGTCACGCATCAAACTTA 58.931 39.130 0.00 0.00 0.00 2.24
3565 4330 4.517075 TGATTGGTCACGCATCAAACTTAA 59.483 37.500 0.00 0.00 0.00 1.85
3566 4331 5.182950 TGATTGGTCACGCATCAAACTTAAT 59.817 36.000 0.00 0.00 0.00 1.40
3567 4332 4.418013 TGGTCACGCATCAAACTTAATG 57.582 40.909 0.00 0.00 0.00 1.90
3568 4333 3.171277 GGTCACGCATCAAACTTAATGC 58.829 45.455 0.00 0.00 43.81 3.56
3569 4334 3.119849 GGTCACGCATCAAACTTAATGCT 60.120 43.478 5.86 0.00 44.81 3.79
3570 4335 4.094294 GGTCACGCATCAAACTTAATGCTA 59.906 41.667 5.86 0.00 44.81 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.166222 ACAAGGACTGTACCCATATGATATAAA 57.834 33.333 3.65 0.00 36.10 1.40
4 5 8.736097 ACAAGGACTGTACCCATATGATATAA 57.264 34.615 3.65 0.00 36.10 0.98
5 6 8.593679 CAACAAGGACTGTACCCATATGATATA 58.406 37.037 3.65 0.00 37.23 0.86
6 7 7.292356 TCAACAAGGACTGTACCCATATGATAT 59.708 37.037 3.65 0.00 37.23 1.63
7 8 6.613679 TCAACAAGGACTGTACCCATATGATA 59.386 38.462 3.65 0.00 37.23 2.15
8 9 5.428457 TCAACAAGGACTGTACCCATATGAT 59.572 40.000 3.65 0.00 37.23 2.45
9 10 4.780554 TCAACAAGGACTGTACCCATATGA 59.219 41.667 3.65 0.00 37.23 2.15
10 11 5.097742 TCAACAAGGACTGTACCCATATG 57.902 43.478 0.00 0.00 37.23 1.78
11 12 5.030147 TCTCAACAAGGACTGTACCCATAT 58.970 41.667 0.00 0.00 37.23 1.78
12 13 4.422057 TCTCAACAAGGACTGTACCCATA 58.578 43.478 0.00 0.00 37.23 2.74
13 14 3.248024 TCTCAACAAGGACTGTACCCAT 58.752 45.455 0.00 0.00 37.23 4.00
14 15 2.632996 CTCTCAACAAGGACTGTACCCA 59.367 50.000 0.00 0.00 37.23 4.51
15 16 2.897969 TCTCTCAACAAGGACTGTACCC 59.102 50.000 0.00 0.00 37.23 3.69
16 17 3.827302 TCTCTCTCAACAAGGACTGTACC 59.173 47.826 0.00 0.00 37.23 3.34
17 18 4.521256 ACTCTCTCTCAACAAGGACTGTAC 59.479 45.833 0.00 0.00 37.23 2.90
18 19 4.730966 ACTCTCTCTCAACAAGGACTGTA 58.269 43.478 0.00 0.00 37.23 2.74
19 20 3.571590 ACTCTCTCTCAACAAGGACTGT 58.428 45.455 0.00 0.00 41.27 3.55
20 21 4.305769 CAACTCTCTCTCAACAAGGACTG 58.694 47.826 0.00 0.00 0.00 3.51
21 22 3.323403 CCAACTCTCTCTCAACAAGGACT 59.677 47.826 0.00 0.00 0.00 3.85
22 23 3.556004 CCCAACTCTCTCTCAACAAGGAC 60.556 52.174 0.00 0.00 0.00 3.85
23 24 2.634940 CCCAACTCTCTCTCAACAAGGA 59.365 50.000 0.00 0.00 0.00 3.36
24 25 2.634940 TCCCAACTCTCTCTCAACAAGG 59.365 50.000 0.00 0.00 0.00 3.61
25 26 3.323403 ACTCCCAACTCTCTCTCAACAAG 59.677 47.826 0.00 0.00 0.00 3.16
26 27 3.309296 ACTCCCAACTCTCTCTCAACAA 58.691 45.455 0.00 0.00 0.00 2.83
27 28 2.894126 GACTCCCAACTCTCTCTCAACA 59.106 50.000 0.00 0.00 0.00 3.33
28 29 3.161866 AGACTCCCAACTCTCTCTCAAC 58.838 50.000 0.00 0.00 0.00 3.18
29 30 3.075283 AGAGACTCCCAACTCTCTCTCAA 59.925 47.826 0.00 0.00 39.26 3.02
30 31 2.647299 AGAGACTCCCAACTCTCTCTCA 59.353 50.000 0.00 0.00 39.26 3.27
31 32 3.366052 AGAGACTCCCAACTCTCTCTC 57.634 52.381 0.00 0.00 39.26 3.20
36 37 3.576550 GAGTTTGAGAGACTCCCAACTCT 59.423 47.826 21.26 13.72 41.51 3.24
37 38 3.322254 TGAGTTTGAGAGACTCCCAACTC 59.678 47.826 21.52 21.52 43.10 3.01
38 39 3.309296 TGAGTTTGAGAGACTCCCAACT 58.691 45.455 0.00 5.23 42.20 3.16
39 40 3.658709 CTGAGTTTGAGAGACTCCCAAC 58.341 50.000 0.00 0.45 42.20 3.77
40 41 2.037772 GCTGAGTTTGAGAGACTCCCAA 59.962 50.000 0.00 0.00 42.20 4.12
41 42 1.620819 GCTGAGTTTGAGAGACTCCCA 59.379 52.381 0.00 0.00 42.20 4.37
42 43 1.066502 GGCTGAGTTTGAGAGACTCCC 60.067 57.143 0.00 0.00 42.20 4.30
43 44 1.403514 CGGCTGAGTTTGAGAGACTCC 60.404 57.143 0.00 0.00 42.20 3.85
44 45 1.989430 CGGCTGAGTTTGAGAGACTC 58.011 55.000 0.00 0.00 42.98 3.36
45 46 0.037790 GCGGCTGAGTTTGAGAGACT 60.038 55.000 0.00 0.00 0.00 3.24
46 47 1.016653 GGCGGCTGAGTTTGAGAGAC 61.017 60.000 0.00 0.00 0.00 3.36
47 48 1.188219 AGGCGGCTGAGTTTGAGAGA 61.188 55.000 12.25 0.00 0.00 3.10
48 49 1.018226 CAGGCGGCTGAGTTTGAGAG 61.018 60.000 33.59 1.70 0.00 3.20
49 50 1.004560 CAGGCGGCTGAGTTTGAGA 60.005 57.895 33.59 0.00 0.00 3.27
50 51 1.294659 GACAGGCGGCTGAGTTTGAG 61.295 60.000 41.51 16.18 0.00 3.02
51 52 1.301716 GACAGGCGGCTGAGTTTGA 60.302 57.895 41.51 0.00 0.00 2.69
52 53 2.328099 GGACAGGCGGCTGAGTTTG 61.328 63.158 41.51 18.55 0.00 2.93
53 54 2.032681 GGACAGGCGGCTGAGTTT 59.967 61.111 41.51 22.22 0.00 2.66
54 55 2.056906 AAAGGACAGGCGGCTGAGTT 62.057 55.000 41.51 27.11 0.00 3.01
55 56 2.520536 AAAGGACAGGCGGCTGAGT 61.521 57.895 41.51 23.39 0.00 3.41
56 57 2.037136 CAAAGGACAGGCGGCTGAG 61.037 63.158 41.51 20.03 0.00 3.35
57 58 2.032528 CAAAGGACAGGCGGCTGA 59.967 61.111 41.51 0.00 0.00 4.26
58 59 3.058160 CCAAAGGACAGGCGGCTG 61.058 66.667 34.75 34.75 0.00 4.85
59 60 3.570212 ACCAAAGGACAGGCGGCT 61.570 61.111 5.25 5.25 0.00 5.52
60 61 3.365265 CACCAAAGGACAGGCGGC 61.365 66.667 0.00 0.00 0.00 6.53
61 62 2.113139 ACACCAAAGGACAGGCGG 59.887 61.111 0.00 0.00 0.00 6.13
62 63 1.227823 TCACACCAAAGGACAGGCG 60.228 57.895 0.00 0.00 0.00 5.52
63 64 0.465460 TGTCACACCAAAGGACAGGC 60.465 55.000 0.00 0.00 36.69 4.85
64 65 1.676006 GTTGTCACACCAAAGGACAGG 59.324 52.381 0.00 0.00 41.99 4.00
65 66 2.364632 TGTTGTCACACCAAAGGACAG 58.635 47.619 0.00 0.00 41.99 3.51
66 67 2.498644 TGTTGTCACACCAAAGGACA 57.501 45.000 0.00 0.00 39.60 4.02
67 68 3.490761 CCAATGTTGTCACACCAAAGGAC 60.491 47.826 0.00 0.00 35.03 3.85
68 69 2.692557 CCAATGTTGTCACACCAAAGGA 59.307 45.455 0.00 0.00 35.03 3.36
69 70 2.430332 ACCAATGTTGTCACACCAAAGG 59.570 45.455 0.00 0.00 35.03 3.11
70 71 3.446799 CACCAATGTTGTCACACCAAAG 58.553 45.455 0.00 0.00 35.03 2.77
71 72 2.167281 CCACCAATGTTGTCACACCAAA 59.833 45.455 0.00 0.00 35.03 3.28
72 73 1.753649 CCACCAATGTTGTCACACCAA 59.246 47.619 0.00 0.00 35.03 3.67
73 74 1.341482 ACCACCAATGTTGTCACACCA 60.341 47.619 0.00 0.00 35.03 4.17
74 75 1.398692 ACCACCAATGTTGTCACACC 58.601 50.000 0.00 0.00 35.03 4.16
75 76 2.946329 TGTACCACCAATGTTGTCACAC 59.054 45.455 0.00 0.00 35.03 3.82
76 77 3.283259 TGTACCACCAATGTTGTCACA 57.717 42.857 0.00 0.00 37.31 3.58
77 78 4.155280 GGTATGTACCACCAATGTTGTCAC 59.845 45.833 8.50 0.00 45.73 3.67
78 79 4.328536 GGTATGTACCACCAATGTTGTCA 58.671 43.478 8.50 0.00 45.73 3.58
79 80 4.957759 GGTATGTACCACCAATGTTGTC 57.042 45.455 8.50 0.00 45.73 3.18
91 92 7.727181 ACTGAATTAGATGACAGGTATGTACC 58.273 38.462 0.81 0.81 46.82 3.34
98 99 9.334947 CATGAAATACTGAATTAGATGACAGGT 57.665 33.333 0.00 0.00 35.08 4.00
99 100 8.288208 GCATGAAATACTGAATTAGATGACAGG 58.712 37.037 0.00 0.00 35.08 4.00
100 101 9.053840 AGCATGAAATACTGAATTAGATGACAG 57.946 33.333 0.00 0.00 36.58 3.51
101 102 8.969260 AGCATGAAATACTGAATTAGATGACA 57.031 30.769 0.00 0.00 0.00 3.58
102 103 8.219769 CGAGCATGAAATACTGAATTAGATGAC 58.780 37.037 0.00 0.00 0.00 3.06
103 104 8.143835 TCGAGCATGAAATACTGAATTAGATGA 58.856 33.333 0.00 0.00 0.00 2.92
104 105 8.302965 TCGAGCATGAAATACTGAATTAGATG 57.697 34.615 0.00 0.00 0.00 2.90
105 106 8.768955 GTTCGAGCATGAAATACTGAATTAGAT 58.231 33.333 0.00 0.00 0.00 1.98
106 107 7.763985 TGTTCGAGCATGAAATACTGAATTAGA 59.236 33.333 0.00 0.00 0.00 2.10
107 108 7.909267 TGTTCGAGCATGAAATACTGAATTAG 58.091 34.615 0.00 0.00 0.00 1.73
108 109 7.841915 TGTTCGAGCATGAAATACTGAATTA 57.158 32.000 0.00 0.00 0.00 1.40
109 110 6.741992 TGTTCGAGCATGAAATACTGAATT 57.258 33.333 0.00 0.00 0.00 2.17
110 111 6.741992 TTGTTCGAGCATGAAATACTGAAT 57.258 33.333 1.75 0.00 0.00 2.57
111 112 6.552859 TTTGTTCGAGCATGAAATACTGAA 57.447 33.333 1.75 0.00 0.00 3.02
112 113 5.390885 GCTTTGTTCGAGCATGAAATACTGA 60.391 40.000 1.75 0.00 39.89 3.41
113 114 4.790140 GCTTTGTTCGAGCATGAAATACTG 59.210 41.667 1.75 0.00 39.89 2.74
114 115 4.455533 TGCTTTGTTCGAGCATGAAATACT 59.544 37.500 1.75 0.00 44.63 2.12
115 116 4.722194 TGCTTTGTTCGAGCATGAAATAC 58.278 39.130 1.75 0.00 44.63 1.89
117 118 3.921119 TGCTTTGTTCGAGCATGAAAT 57.079 38.095 1.75 0.00 44.63 2.17
124 125 2.686558 TCAATGTGCTTTGTTCGAGC 57.313 45.000 0.00 0.00 40.53 5.03
125 126 4.214980 ACTTCAATGTGCTTTGTTCGAG 57.785 40.909 0.00 0.00 0.00 4.04
126 127 4.095632 TCAACTTCAATGTGCTTTGTTCGA 59.904 37.500 0.00 0.00 0.00 3.71
127 128 4.204978 GTCAACTTCAATGTGCTTTGTTCG 59.795 41.667 0.00 0.00 0.00 3.95
128 129 5.343249 AGTCAACTTCAATGTGCTTTGTTC 58.657 37.500 0.00 0.00 0.00 3.18
129 130 5.329035 AGTCAACTTCAATGTGCTTTGTT 57.671 34.783 0.00 0.00 0.00 2.83
130 131 4.989279 AGTCAACTTCAATGTGCTTTGT 57.011 36.364 0.00 0.00 0.00 2.83
131 132 6.580041 GTGATAGTCAACTTCAATGTGCTTTG 59.420 38.462 0.00 0.00 0.00 2.77
132 133 6.488006 AGTGATAGTCAACTTCAATGTGCTTT 59.512 34.615 0.00 0.00 0.00 3.51
133 134 6.000219 AGTGATAGTCAACTTCAATGTGCTT 59.000 36.000 0.00 0.00 0.00 3.91
134 135 5.555017 AGTGATAGTCAACTTCAATGTGCT 58.445 37.500 0.00 0.00 0.00 4.40
135 136 5.869753 AGTGATAGTCAACTTCAATGTGC 57.130 39.130 0.00 0.00 0.00 4.57
136 137 7.588854 CACAAAGTGATAGTCAACTTCAATGTG 59.411 37.037 9.41 9.41 35.23 3.21
137 138 7.498900 TCACAAAGTGATAGTCAACTTCAATGT 59.501 33.333 0.00 0.00 37.67 2.71
138 139 7.800380 GTCACAAAGTGATAGTCAACTTCAATG 59.200 37.037 2.90 0.00 44.63 2.82
139 140 7.498900 TGTCACAAAGTGATAGTCAACTTCAAT 59.501 33.333 2.90 0.00 44.63 2.57
140 141 6.821160 TGTCACAAAGTGATAGTCAACTTCAA 59.179 34.615 2.90 0.00 44.63 2.69
141 142 6.345298 TGTCACAAAGTGATAGTCAACTTCA 58.655 36.000 2.90 0.00 44.63 3.02
142 143 6.701841 TCTGTCACAAAGTGATAGTCAACTTC 59.298 38.462 18.93 0.00 46.74 3.01
143 144 6.582636 TCTGTCACAAAGTGATAGTCAACTT 58.417 36.000 18.93 0.00 46.74 2.66
144 145 6.161855 TCTGTCACAAAGTGATAGTCAACT 57.838 37.500 18.93 0.00 46.74 3.16
145 146 6.257849 TGTTCTGTCACAAAGTGATAGTCAAC 59.742 38.462 18.93 16.90 46.74 3.18
146 147 6.345298 TGTTCTGTCACAAAGTGATAGTCAA 58.655 36.000 18.93 8.25 46.74 3.18
147 148 5.912892 TGTTCTGTCACAAAGTGATAGTCA 58.087 37.500 18.93 16.34 46.74 3.41
148 149 6.425114 ACATGTTCTGTCACAAAGTGATAGTC 59.575 38.462 18.93 14.66 46.74 2.59
149 150 6.291377 ACATGTTCTGTCACAAAGTGATAGT 58.709 36.000 18.93 2.52 46.74 2.12
151 152 6.513230 GCAACATGTTCTGTCACAAAGTGATA 60.513 38.462 8.48 0.00 44.63 2.15
152 153 5.734220 GCAACATGTTCTGTCACAAAGTGAT 60.734 40.000 8.48 0.00 44.63 3.06
153 154 4.438608 GCAACATGTTCTGTCACAAAGTGA 60.439 41.667 8.48 0.00 40.50 3.41
154 155 3.792956 GCAACATGTTCTGTCACAAAGTG 59.207 43.478 8.48 0.00 36.98 3.16
155 156 3.443329 TGCAACATGTTCTGTCACAAAGT 59.557 39.130 8.48 0.00 36.98 2.66
156 157 3.792956 GTGCAACATGTTCTGTCACAAAG 59.207 43.478 8.48 0.00 36.98 2.77
157 158 3.192212 TGTGCAACATGTTCTGTCACAAA 59.808 39.130 20.70 7.41 45.67 2.83
158 159 2.751806 TGTGCAACATGTTCTGTCACAA 59.248 40.909 20.70 10.89 45.67 3.33
159 160 2.363683 TGTGCAACATGTTCTGTCACA 58.636 42.857 19.80 19.80 45.67 3.58
172 173 7.364522 TGATATGAAGTAGTTTCTGTGCAAC 57.635 36.000 0.00 0.00 36.71 4.17
173 174 7.661437 ACTTGATATGAAGTAGTTTCTGTGCAA 59.339 33.333 5.70 0.00 34.29 4.08
174 175 7.161404 ACTTGATATGAAGTAGTTTCTGTGCA 58.839 34.615 5.70 0.00 34.29 4.57
175 176 7.602517 ACTTGATATGAAGTAGTTTCTGTGC 57.397 36.000 5.70 0.00 34.29 4.57
176 177 9.208022 TGAACTTGATATGAAGTAGTTTCTGTG 57.792 33.333 8.05 0.00 35.01 3.66
177 178 9.209175 GTGAACTTGATATGAAGTAGTTTCTGT 57.791 33.333 8.05 0.00 35.01 3.41
178 179 8.660373 GGTGAACTTGATATGAAGTAGTTTCTG 58.340 37.037 8.05 0.00 35.01 3.02
179 180 8.598041 AGGTGAACTTGATATGAAGTAGTTTCT 58.402 33.333 8.05 1.09 35.01 2.52
180 181 8.779354 AGGTGAACTTGATATGAAGTAGTTTC 57.221 34.615 8.05 3.13 35.01 2.78
181 182 7.824779 GGAGGTGAACTTGATATGAAGTAGTTT 59.175 37.037 8.05 0.00 35.01 2.66
182 183 7.181125 AGGAGGTGAACTTGATATGAAGTAGTT 59.819 37.037 8.05 0.00 35.01 2.24
183 184 6.670027 AGGAGGTGAACTTGATATGAAGTAGT 59.330 38.462 8.05 0.00 35.01 2.73
184 185 7.069331 AGAGGAGGTGAACTTGATATGAAGTAG 59.931 40.741 8.05 0.00 35.01 2.57
185 186 6.897966 AGAGGAGGTGAACTTGATATGAAGTA 59.102 38.462 8.05 0.00 35.01 2.24
186 187 5.723887 AGAGGAGGTGAACTTGATATGAAGT 59.276 40.000 1.25 1.25 37.81 3.01
187 188 6.232581 AGAGGAGGTGAACTTGATATGAAG 57.767 41.667 0.00 0.00 0.00 3.02
188 189 7.733773 TTAGAGGAGGTGAACTTGATATGAA 57.266 36.000 0.00 0.00 0.00 2.57
189 190 7.733773 TTTAGAGGAGGTGAACTTGATATGA 57.266 36.000 0.00 0.00 0.00 2.15
190 191 8.792830 TTTTTAGAGGAGGTGAACTTGATATG 57.207 34.615 0.00 0.00 0.00 1.78
191 192 9.620259 GATTTTTAGAGGAGGTGAACTTGATAT 57.380 33.333 0.00 0.00 0.00 1.63
192 193 8.602424 TGATTTTTAGAGGAGGTGAACTTGATA 58.398 33.333 0.00 0.00 0.00 2.15
193 194 7.461749 TGATTTTTAGAGGAGGTGAACTTGAT 58.538 34.615 0.00 0.00 0.00 2.57
194 195 6.837312 TGATTTTTAGAGGAGGTGAACTTGA 58.163 36.000 0.00 0.00 0.00 3.02
195 196 7.229506 AGTTGATTTTTAGAGGAGGTGAACTTG 59.770 37.037 0.00 0.00 0.00 3.16
196 197 7.290813 AGTTGATTTTTAGAGGAGGTGAACTT 58.709 34.615 0.00 0.00 0.00 2.66
197 198 6.842676 AGTTGATTTTTAGAGGAGGTGAACT 58.157 36.000 0.00 0.00 0.00 3.01
198 199 7.363431 CAAGTTGATTTTTAGAGGAGGTGAAC 58.637 38.462 0.00 0.00 0.00 3.18
199 200 6.016276 GCAAGTTGATTTTTAGAGGAGGTGAA 60.016 38.462 7.16 0.00 0.00 3.18
200 201 5.473504 GCAAGTTGATTTTTAGAGGAGGTGA 59.526 40.000 7.16 0.00 0.00 4.02
201 202 5.474876 AGCAAGTTGATTTTTAGAGGAGGTG 59.525 40.000 7.16 0.00 0.00 4.00
202 203 5.635120 AGCAAGTTGATTTTTAGAGGAGGT 58.365 37.500 7.16 0.00 0.00 3.85
203 204 7.174946 TGTTAGCAAGTTGATTTTTAGAGGAGG 59.825 37.037 7.16 0.00 0.00 4.30
204 205 8.099364 TGTTAGCAAGTTGATTTTTAGAGGAG 57.901 34.615 7.16 0.00 0.00 3.69
205 206 8.635765 ATGTTAGCAAGTTGATTTTTAGAGGA 57.364 30.769 7.16 0.00 0.00 3.71
206 207 8.734386 AGATGTTAGCAAGTTGATTTTTAGAGG 58.266 33.333 7.16 0.00 0.00 3.69
209 210 9.897744 TGAAGATGTTAGCAAGTTGATTTTTAG 57.102 29.630 7.16 0.00 0.00 1.85
210 211 9.677567 GTGAAGATGTTAGCAAGTTGATTTTTA 57.322 29.630 7.16 0.00 0.00 1.52
211 212 7.379529 CGTGAAGATGTTAGCAAGTTGATTTTT 59.620 33.333 7.16 0.00 0.00 1.94
212 213 6.857964 CGTGAAGATGTTAGCAAGTTGATTTT 59.142 34.615 7.16 0.00 0.00 1.82
213 214 6.204688 TCGTGAAGATGTTAGCAAGTTGATTT 59.795 34.615 7.16 0.00 0.00 2.17
214 215 5.700832 TCGTGAAGATGTTAGCAAGTTGATT 59.299 36.000 7.16 0.00 0.00 2.57
215 216 5.237815 TCGTGAAGATGTTAGCAAGTTGAT 58.762 37.500 7.16 2.05 0.00 2.57
216 217 4.627058 TCGTGAAGATGTTAGCAAGTTGA 58.373 39.130 7.16 0.00 0.00 3.18
217 218 4.990543 TCGTGAAGATGTTAGCAAGTTG 57.009 40.909 0.00 0.00 0.00 3.16
218 219 4.083802 GCTTCGTGAAGATGTTAGCAAGTT 60.084 41.667 13.60 0.00 40.79 2.66
219 220 3.433615 GCTTCGTGAAGATGTTAGCAAGT 59.566 43.478 13.60 0.00 40.79 3.16
220 221 3.181516 GGCTTCGTGAAGATGTTAGCAAG 60.182 47.826 13.60 0.00 40.79 4.01
221 222 2.742053 GGCTTCGTGAAGATGTTAGCAA 59.258 45.455 13.60 0.00 40.79 3.91
222 223 2.028112 AGGCTTCGTGAAGATGTTAGCA 60.028 45.455 13.60 0.00 40.79 3.49
223 224 2.605366 GAGGCTTCGTGAAGATGTTAGC 59.395 50.000 13.60 0.00 40.79 3.09
224 225 4.116747 AGAGGCTTCGTGAAGATGTTAG 57.883 45.455 13.60 0.00 40.79 2.34
225 226 5.408356 GTTAGAGGCTTCGTGAAGATGTTA 58.592 41.667 13.60 0.00 40.79 2.41
226 227 4.246458 GTTAGAGGCTTCGTGAAGATGTT 58.754 43.478 13.60 0.00 40.79 2.71
227 228 3.673594 CGTTAGAGGCTTCGTGAAGATGT 60.674 47.826 13.60 2.61 40.79 3.06
228 229 2.854777 CGTTAGAGGCTTCGTGAAGATG 59.145 50.000 13.60 0.00 40.79 2.90
229 230 2.735762 GCGTTAGAGGCTTCGTGAAGAT 60.736 50.000 13.60 0.93 40.79 2.40
230 231 1.402456 GCGTTAGAGGCTTCGTGAAGA 60.402 52.381 13.60 0.00 40.79 2.87
231 232 0.992802 GCGTTAGAGGCTTCGTGAAG 59.007 55.000 5.24 5.24 41.24 3.02
232 233 0.315886 TGCGTTAGAGGCTTCGTGAA 59.684 50.000 0.00 0.00 0.00 3.18
233 234 0.109272 CTGCGTTAGAGGCTTCGTGA 60.109 55.000 0.00 0.00 0.00 4.35
234 235 1.687494 GCTGCGTTAGAGGCTTCGTG 61.687 60.000 0.00 0.00 0.00 4.35
235 236 1.446272 GCTGCGTTAGAGGCTTCGT 60.446 57.895 0.00 0.00 0.00 3.85
236 237 2.167861 GGCTGCGTTAGAGGCTTCG 61.168 63.158 0.00 0.00 33.29 3.79
237 238 0.808060 GAGGCTGCGTTAGAGGCTTC 60.808 60.000 0.00 0.00 45.79 3.86
238 239 1.219393 GAGGCTGCGTTAGAGGCTT 59.781 57.895 0.00 0.00 45.79 4.35
240 241 1.520342 CTGAGGCTGCGTTAGAGGC 60.520 63.158 8.25 0.00 36.26 4.70
241 242 0.247736 AACTGAGGCTGCGTTAGAGG 59.752 55.000 19.03 0.00 0.00 3.69
242 243 2.086054 AAACTGAGGCTGCGTTAGAG 57.914 50.000 19.03 7.96 0.00 2.43
243 244 3.887621 ATAAACTGAGGCTGCGTTAGA 57.112 42.857 19.03 0.00 0.00 2.10
244 245 4.051922 CCTATAAACTGAGGCTGCGTTAG 58.948 47.826 11.87 11.87 0.00 2.34
245 246 3.449737 ACCTATAAACTGAGGCTGCGTTA 59.550 43.478 0.00 0.00 36.17 3.18
246 247 2.236395 ACCTATAAACTGAGGCTGCGTT 59.764 45.455 0.00 0.00 36.17 4.84
247 248 1.831736 ACCTATAAACTGAGGCTGCGT 59.168 47.619 0.00 0.00 36.17 5.24
248 249 2.604046 ACCTATAAACTGAGGCTGCG 57.396 50.000 0.00 0.00 36.17 5.18
249 250 3.610911 ACAACCTATAAACTGAGGCTGC 58.389 45.455 0.00 0.00 36.17 5.25
250 251 5.360591 CCTACAACCTATAAACTGAGGCTG 58.639 45.833 0.00 0.00 36.17 4.85
251 252 4.141688 GCCTACAACCTATAAACTGAGGCT 60.142 45.833 0.00 0.00 42.94 4.58
252 253 4.127907 GCCTACAACCTATAAACTGAGGC 58.872 47.826 0.00 0.00 40.13 4.70
253 254 4.369182 CGCCTACAACCTATAAACTGAGG 58.631 47.826 0.00 0.00 38.92 3.86
254 255 3.802685 GCGCCTACAACCTATAAACTGAG 59.197 47.826 0.00 0.00 0.00 3.35
255 256 3.196039 TGCGCCTACAACCTATAAACTGA 59.804 43.478 4.18 0.00 0.00 3.41
256 257 3.527533 TGCGCCTACAACCTATAAACTG 58.472 45.455 4.18 0.00 0.00 3.16
257 258 3.899052 TGCGCCTACAACCTATAAACT 57.101 42.857 4.18 0.00 0.00 2.66
258 259 4.814771 AGATTGCGCCTACAACCTATAAAC 59.185 41.667 4.18 0.00 31.03 2.01
259 260 5.031066 AGATTGCGCCTACAACCTATAAA 57.969 39.130 4.18 0.00 31.03 1.40
260 261 4.682778 AGATTGCGCCTACAACCTATAA 57.317 40.909 4.18 0.00 31.03 0.98
261 262 4.682778 AAGATTGCGCCTACAACCTATA 57.317 40.909 4.18 0.00 31.03 1.31
262 263 3.560636 AAGATTGCGCCTACAACCTAT 57.439 42.857 4.18 0.00 31.03 2.57
263 264 4.186159 GTTAAGATTGCGCCTACAACCTA 58.814 43.478 4.18 0.00 31.03 3.08
264 265 3.007635 GTTAAGATTGCGCCTACAACCT 58.992 45.455 4.18 0.00 31.03 3.50
265 266 2.745281 TGTTAAGATTGCGCCTACAACC 59.255 45.455 4.18 0.00 31.03 3.77
266 267 4.094294 TCATGTTAAGATTGCGCCTACAAC 59.906 41.667 4.18 4.01 31.03 3.32
267 268 4.257731 TCATGTTAAGATTGCGCCTACAA 58.742 39.130 4.18 0.00 0.00 2.41
268 269 3.867857 TCATGTTAAGATTGCGCCTACA 58.132 40.909 4.18 0.00 0.00 2.74
269 270 5.424121 AATCATGTTAAGATTGCGCCTAC 57.576 39.130 4.18 0.00 34.59 3.18
270 271 5.356751 ACAAATCATGTTAAGATTGCGCCTA 59.643 36.000 4.18 0.00 40.06 3.93
271 272 4.158394 ACAAATCATGTTAAGATTGCGCCT 59.842 37.500 4.18 0.00 40.06 5.52
272 273 4.423732 ACAAATCATGTTAAGATTGCGCC 58.576 39.130 4.18 0.00 40.06 6.53
273 274 5.455525 GGTACAAATCATGTTAAGATTGCGC 59.544 40.000 0.00 0.00 43.63 6.09
274 275 6.785191 AGGTACAAATCATGTTAAGATTGCG 58.215 36.000 0.00 0.00 43.63 4.85
275 276 9.722056 CTAAGGTACAAATCATGTTAAGATTGC 57.278 33.333 0.00 0.00 43.63 3.56
305 306 9.462606 CCAACAACCTCCTTTAATCTTAACTAT 57.537 33.333 0.00 0.00 0.00 2.12
306 307 7.886446 CCCAACAACCTCCTTTAATCTTAACTA 59.114 37.037 0.00 0.00 0.00 2.24
307 308 6.719829 CCCAACAACCTCCTTTAATCTTAACT 59.280 38.462 0.00 0.00 0.00 2.24
308 309 6.571731 GCCCAACAACCTCCTTTAATCTTAAC 60.572 42.308 0.00 0.00 0.00 2.01
309 310 5.479027 GCCCAACAACCTCCTTTAATCTTAA 59.521 40.000 0.00 0.00 0.00 1.85
310 311 5.014202 GCCCAACAACCTCCTTTAATCTTA 58.986 41.667 0.00 0.00 0.00 2.10
311 312 3.832490 GCCCAACAACCTCCTTTAATCTT 59.168 43.478 0.00 0.00 0.00 2.40
312 313 3.076032 AGCCCAACAACCTCCTTTAATCT 59.924 43.478 0.00 0.00 0.00 2.40
313 314 3.193479 CAGCCCAACAACCTCCTTTAATC 59.807 47.826 0.00 0.00 0.00 1.75
314 315 3.165071 CAGCCCAACAACCTCCTTTAAT 58.835 45.455 0.00 0.00 0.00 1.40
315 316 2.091555 ACAGCCCAACAACCTCCTTTAA 60.092 45.455 0.00 0.00 0.00 1.52
316 317 1.497286 ACAGCCCAACAACCTCCTTTA 59.503 47.619 0.00 0.00 0.00 1.85
317 318 0.261696 ACAGCCCAACAACCTCCTTT 59.738 50.000 0.00 0.00 0.00 3.11
318 319 0.468029 CACAGCCCAACAACCTCCTT 60.468 55.000 0.00 0.00 0.00 3.36
319 320 1.151450 CACAGCCCAACAACCTCCT 59.849 57.895 0.00 0.00 0.00 3.69
320 321 0.755327 AACACAGCCCAACAACCTCC 60.755 55.000 0.00 0.00 0.00 4.30
321 322 1.111277 AAACACAGCCCAACAACCTC 58.889 50.000 0.00 0.00 0.00 3.85
322 323 2.028876 GTAAACACAGCCCAACAACCT 58.971 47.619 0.00 0.00 0.00 3.50
323 324 1.751924 TGTAAACACAGCCCAACAACC 59.248 47.619 0.00 0.00 0.00 3.77
324 325 3.726291 ATGTAAACACAGCCCAACAAC 57.274 42.857 0.00 0.00 0.00 3.32
325 326 5.048364 GTCATATGTAAACACAGCCCAACAA 60.048 40.000 1.90 0.00 0.00 2.83
326 327 4.457603 GTCATATGTAAACACAGCCCAACA 59.542 41.667 1.90 0.00 0.00 3.33
327 328 4.700213 AGTCATATGTAAACACAGCCCAAC 59.300 41.667 1.90 0.00 0.00 3.77
328 329 4.917385 AGTCATATGTAAACACAGCCCAA 58.083 39.130 1.90 0.00 0.00 4.12
329 330 4.568072 AGTCATATGTAAACACAGCCCA 57.432 40.909 1.90 0.00 0.00 5.36
330 331 5.897377 AAAGTCATATGTAAACACAGCCC 57.103 39.130 1.90 0.00 0.00 5.19
331 332 6.677913 ACAAAAGTCATATGTAAACACAGCC 58.322 36.000 1.90 0.00 0.00 4.85
369 370 9.969001 AGGGTACACAAAAGTGTATAATACAAT 57.031 29.630 11.15 0.00 41.21 2.71
370 371 9.796180 AAGGGTACACAAAAGTGTATAATACAA 57.204 29.630 11.15 0.00 41.21 2.41
371 372 9.796180 AAAGGGTACACAAAAGTGTATAATACA 57.204 29.630 11.15 0.00 41.21 2.29
374 375 8.927675 TGAAAGGGTACACAAAAGTGTATAAT 57.072 30.769 11.15 0.00 41.21 1.28
375 376 8.927675 ATGAAAGGGTACACAAAAGTGTATAA 57.072 30.769 11.15 0.00 41.21 0.98
403 404 8.766476 CCCTTAATGGATGTGACTATCTCATAT 58.234 37.037 0.00 0.00 38.35 1.78
404 405 7.734865 ACCCTTAATGGATGTGACTATCTCATA 59.265 37.037 3.52 0.00 38.35 2.15
405 406 6.560304 ACCCTTAATGGATGTGACTATCTCAT 59.440 38.462 3.52 0.00 38.35 2.90
406 407 5.905331 ACCCTTAATGGATGTGACTATCTCA 59.095 40.000 3.52 0.00 38.35 3.27
407 408 6.183361 ACACCCTTAATGGATGTGACTATCTC 60.183 42.308 3.52 0.00 38.35 2.75
408 409 5.667626 ACACCCTTAATGGATGTGACTATCT 59.332 40.000 3.52 0.00 38.35 1.98
409 410 5.930135 ACACCCTTAATGGATGTGACTATC 58.070 41.667 3.52 0.00 38.35 2.08
410 411 5.453339 CGACACCCTTAATGGATGTGACTAT 60.453 44.000 3.52 0.00 38.35 2.12
411 412 4.142026 CGACACCCTTAATGGATGTGACTA 60.142 45.833 3.52 0.00 38.35 2.59
412 413 3.369471 CGACACCCTTAATGGATGTGACT 60.369 47.826 3.52 0.00 38.35 3.41
413 414 2.936498 CGACACCCTTAATGGATGTGAC 59.064 50.000 3.52 0.18 38.35 3.67
414 415 2.835156 TCGACACCCTTAATGGATGTGA 59.165 45.455 3.52 3.42 38.35 3.58
415 416 3.198068 CTCGACACCCTTAATGGATGTG 58.802 50.000 3.52 2.30 38.35 3.21
416 417 2.420129 GCTCGACACCCTTAATGGATGT 60.420 50.000 3.52 4.56 38.35 3.06
417 418 2.213499 GCTCGACACCCTTAATGGATG 58.787 52.381 3.52 1.55 38.35 3.51
418 419 1.837439 TGCTCGACACCCTTAATGGAT 59.163 47.619 3.52 0.00 38.35 3.41
419 420 1.207089 CTGCTCGACACCCTTAATGGA 59.793 52.381 3.52 0.00 38.35 3.41
420 421 1.066143 ACTGCTCGACACCCTTAATGG 60.066 52.381 0.00 0.00 0.00 3.16
421 422 2.386661 ACTGCTCGACACCCTTAATG 57.613 50.000 0.00 0.00 0.00 1.90
422 423 3.074412 CAAACTGCTCGACACCCTTAAT 58.926 45.455 0.00 0.00 0.00 1.40
423 424 2.489971 CAAACTGCTCGACACCCTTAA 58.510 47.619 0.00 0.00 0.00 1.85
424 425 1.270625 CCAAACTGCTCGACACCCTTA 60.271 52.381 0.00 0.00 0.00 2.69
425 426 0.535102 CCAAACTGCTCGACACCCTT 60.535 55.000 0.00 0.00 0.00 3.95
426 427 1.071471 CCAAACTGCTCGACACCCT 59.929 57.895 0.00 0.00 0.00 4.34
427 428 2.617274 GCCAAACTGCTCGACACCC 61.617 63.158 0.00 0.00 0.00 4.61
428 429 1.845809 CTGCCAAACTGCTCGACACC 61.846 60.000 0.00 0.00 0.00 4.16
429 430 0.880278 TCTGCCAAACTGCTCGACAC 60.880 55.000 0.00 0.00 0.00 3.67
430 431 0.880278 GTCTGCCAAACTGCTCGACA 60.880 55.000 0.00 0.00 34.64 4.35
431 432 1.569479 GGTCTGCCAAACTGCTCGAC 61.569 60.000 0.00 0.00 34.13 4.20
432 433 1.301716 GGTCTGCCAAACTGCTCGA 60.302 57.895 0.00 0.00 34.09 4.04
433 434 1.597854 TGGTCTGCCAAACTGCTCG 60.598 57.895 0.00 0.00 42.83 5.03
434 435 4.481195 TGGTCTGCCAAACTGCTC 57.519 55.556 0.00 0.00 42.83 4.26
453 454 9.057089 CCTCAAGACTTGTAAATTGTTAGACTT 57.943 33.333 14.75 0.00 0.00 3.01
454 455 7.173390 GCCTCAAGACTTGTAAATTGTTAGACT 59.827 37.037 14.75 0.00 0.00 3.24
455 456 7.173390 AGCCTCAAGACTTGTAAATTGTTAGAC 59.827 37.037 14.75 0.00 0.00 2.59
456 457 7.224297 AGCCTCAAGACTTGTAAATTGTTAGA 58.776 34.615 14.75 0.00 0.00 2.10
457 458 7.389053 AGAGCCTCAAGACTTGTAAATTGTTAG 59.611 37.037 14.75 1.96 0.00 2.34
458 459 7.224297 AGAGCCTCAAGACTTGTAAATTGTTA 58.776 34.615 14.75 0.00 0.00 2.41
459 460 6.064717 AGAGCCTCAAGACTTGTAAATTGTT 58.935 36.000 14.75 0.00 0.00 2.83
460 461 5.625150 AGAGCCTCAAGACTTGTAAATTGT 58.375 37.500 14.75 0.00 0.00 2.71
461 462 6.205464 TCAAGAGCCTCAAGACTTGTAAATTG 59.795 38.462 14.75 12.48 40.07 2.32
462 463 6.299141 TCAAGAGCCTCAAGACTTGTAAATT 58.701 36.000 14.75 2.10 40.07 1.82
463 464 5.869579 TCAAGAGCCTCAAGACTTGTAAAT 58.130 37.500 14.75 0.85 40.07 1.40
464 465 5.290493 TCAAGAGCCTCAAGACTTGTAAA 57.710 39.130 14.75 0.00 40.07 2.01
465 466 4.955811 TCAAGAGCCTCAAGACTTGTAA 57.044 40.909 14.75 0.00 40.07 2.41
466 467 5.489792 AATCAAGAGCCTCAAGACTTGTA 57.510 39.130 14.75 1.70 40.07 2.41
467 468 4.363991 AATCAAGAGCCTCAAGACTTGT 57.636 40.909 14.75 0.00 40.07 3.16
468 469 5.240183 TGAAAATCAAGAGCCTCAAGACTTG 59.760 40.000 9.03 9.03 40.37 3.16
469 470 5.240403 GTGAAAATCAAGAGCCTCAAGACTT 59.760 40.000 0.00 0.00 0.00 3.01
476 477 2.751806 CAGGGTGAAAATCAAGAGCCTC 59.248 50.000 0.00 0.00 34.03 4.70
478 479 1.821136 CCAGGGTGAAAATCAAGAGCC 59.179 52.381 0.00 0.00 0.00 4.70
503 504 1.949465 AGGCCTATTTAAAGACCGCG 58.051 50.000 1.29 0.00 0.00 6.46
504 505 4.895961 AGATAGGCCTATTTAAAGACCGC 58.104 43.478 26.13 9.43 0.00 5.68
525 527 1.448540 CTACGTTGGCAGCCAGGAG 60.449 63.158 15.50 12.40 33.81 3.69
539 547 4.082354 GGGCTACATATAACCTGTCCTACG 60.082 50.000 0.00 0.00 0.00 3.51
544 552 8.741603 TTAAAAAGGGCTACATATAACCTGTC 57.258 34.615 0.00 0.00 0.00 3.51
680 696 8.806146 GGCCCATTTTCATGTATGTATATTTCT 58.194 33.333 0.00 0.00 0.00 2.52
685 701 6.836007 TGTTGGCCCATTTTCATGTATGTATA 59.164 34.615 0.00 0.00 0.00 1.47
690 706 5.697082 AATGTTGGCCCATTTTCATGTAT 57.303 34.783 0.00 0.00 31.01 2.29
691 707 5.495926 AAATGTTGGCCCATTTTCATGTA 57.504 34.783 12.65 0.00 41.11 2.29
720 736 2.368548 AGAAAACAAAATCCCTGCCCAC 59.631 45.455 0.00 0.00 0.00 4.61
983 1037 0.874390 CATGGTTGACGTTCCTGTGG 59.126 55.000 0.00 0.00 0.00 4.17
1571 1739 0.381801 AAAAGTTGACGCAGCCACTG 59.618 50.000 0.00 0.00 34.12 3.66
1574 1742 1.098869 TGAAAAAGTTGACGCAGCCA 58.901 45.000 0.00 0.00 0.00 4.75
1610 1784 4.793071 CAGAATGTTTTTGCACGATACCA 58.207 39.130 0.00 0.00 0.00 3.25
1686 1896 9.566530 TCATCCATCAAATGTAAAATAAACACG 57.433 29.630 0.00 0.00 0.00 4.49
1719 1931 5.738619 ACAGTTCATATATATGCACGGGA 57.261 39.130 22.21 3.78 35.46 5.14
1727 1939 7.872483 TGTGACGATGCAACAGTTCATATATAT 59.128 33.333 0.00 0.00 0.00 0.86
1728 1940 7.206687 TGTGACGATGCAACAGTTCATATATA 58.793 34.615 0.00 0.00 0.00 0.86
1729 1941 6.048509 TGTGACGATGCAACAGTTCATATAT 58.951 36.000 0.00 0.00 0.00 0.86
1730 1942 5.415221 TGTGACGATGCAACAGTTCATATA 58.585 37.500 0.00 0.00 0.00 0.86
1772 2170 6.422776 AGCAAAATAATGAAGTACGGAGTG 57.577 37.500 0.00 0.00 45.73 3.51
1861 2263 7.079451 TCTCCTGACCAAAAGATTCTTTAGT 57.921 36.000 11.92 12.10 0.00 2.24
1892 2585 1.920574 GATGTCTTCACCACGATCGTG 59.079 52.381 35.57 35.57 45.02 4.35
1922 2618 4.243008 TTGCCGCCGTGGAACTCA 62.243 61.111 0.88 0.00 42.00 3.41
2030 2726 0.391793 GCTTGACCCTCCAGTAGCAC 60.392 60.000 0.00 0.00 0.00 4.40
2582 3290 1.325904 GAAGTGAACGACGTCGACGG 61.326 60.000 41.52 24.94 44.95 4.79
2584 3292 0.768846 GTGAAGTGAACGACGTCGAC 59.231 55.000 41.52 31.32 43.02 4.20
2585 3293 0.317269 GGTGAAGTGAACGACGTCGA 60.317 55.000 41.52 19.40 43.02 4.20
2586 3294 1.594269 CGGTGAAGTGAACGACGTCG 61.594 60.000 34.58 34.58 46.33 5.12
2587 3295 0.593263 ACGGTGAAGTGAACGACGTC 60.593 55.000 5.18 5.18 33.95 4.34
2588 3296 0.868602 CACGGTGAAGTGAACGACGT 60.869 55.000 0.74 0.00 44.43 4.34
2589 3297 1.545614 CCACGGTGAAGTGAACGACG 61.546 60.000 10.28 0.00 44.43 5.12
2590 3298 1.828331 GCCACGGTGAAGTGAACGAC 61.828 60.000 10.28 0.00 44.43 4.34
2591 3299 1.593209 GCCACGGTGAAGTGAACGA 60.593 57.895 10.28 0.00 44.43 3.85
2592 3300 1.594293 AGCCACGGTGAAGTGAACG 60.594 57.895 10.28 0.00 44.43 3.95
2593 3301 0.814010 ACAGCCACGGTGAAGTGAAC 60.814 55.000 10.28 0.00 44.43 3.18
2633 3342 2.094545 GGCAATCACAGACCAATTGGAC 60.095 50.000 31.22 24.28 38.94 4.02
2686 3399 6.139679 TCTAGTGGGGAGAAAAATGAACAT 57.860 37.500 0.00 0.00 0.00 2.71
2692 3405 9.997172 AATATTTCTTCTAGTGGGGAGAAAAAT 57.003 29.630 8.99 0.00 32.64 1.82
2828 3589 3.759086 AGCTCTCATCAGTAACGACAAGA 59.241 43.478 0.00 0.00 0.00 3.02
3094 3855 4.642445 TGTCAATCGATTTAGAGGCGTA 57.358 40.909 8.21 0.00 0.00 4.42
3095 3856 3.520290 TGTCAATCGATTTAGAGGCGT 57.480 42.857 8.21 0.00 0.00 5.68
3103 3864 7.533900 CGAAAAGTTGTGTATGTCAATCGATTT 59.466 33.333 8.21 0.00 30.36 2.17
3111 3876 8.771920 AATAGATCGAAAAGTTGTGTATGTCA 57.228 30.769 0.00 0.00 0.00 3.58
3114 3879 8.196802 TGGAATAGATCGAAAAGTTGTGTATG 57.803 34.615 0.00 0.00 0.00 2.39
3127 3892 6.073058 GCATTAGCACATTTGGAATAGATCGA 60.073 38.462 0.00 0.00 41.58 3.59
3128 3893 6.082338 GCATTAGCACATTTGGAATAGATCG 58.918 40.000 0.00 0.00 41.58 3.69
3131 3896 5.067674 GTGGCATTAGCACATTTGGAATAGA 59.932 40.000 0.00 0.00 44.61 1.98
3132 3897 5.284079 GTGGCATTAGCACATTTGGAATAG 58.716 41.667 0.00 0.00 44.61 1.73
3170 3935 1.626654 CGCAATTCTCGGTTCGCACT 61.627 55.000 0.00 0.00 0.00 4.40
3171 3936 1.225745 CGCAATTCTCGGTTCGCAC 60.226 57.895 0.00 0.00 0.00 5.34
3172 3937 1.666553 ACGCAATTCTCGGTTCGCA 60.667 52.632 2.28 0.00 0.00 5.10
3173 3938 1.225745 CACGCAATTCTCGGTTCGC 60.226 57.895 2.28 0.00 0.00 4.70
3174 3939 1.225745 GCACGCAATTCTCGGTTCG 60.226 57.895 2.28 0.00 0.00 3.95
3175 3940 1.134694 GGCACGCAATTCTCGGTTC 59.865 57.895 2.28 0.00 0.00 3.62
3176 3941 1.169661 TTGGCACGCAATTCTCGGTT 61.170 50.000 0.00 0.00 0.00 4.44
3177 3942 1.599518 TTGGCACGCAATTCTCGGT 60.600 52.632 0.00 0.00 0.00 4.69
3178 3943 1.154225 GTTGGCACGCAATTCTCGG 60.154 57.895 0.00 0.00 0.00 4.63
3179 3944 1.154225 GGTTGGCACGCAATTCTCG 60.154 57.895 0.00 0.00 0.00 4.04
3180 3945 1.212751 GGGTTGGCACGCAATTCTC 59.787 57.895 0.00 0.00 35.88 2.87
3181 3946 2.625823 CGGGTTGGCACGCAATTCT 61.626 57.895 0.00 0.00 35.55 2.40
3298 4063 0.374758 CACCATCTTGGCAATCGTCG 59.625 55.000 0.00 0.00 42.67 5.12
3300 4065 0.038166 ACCACCATCTTGGCAATCGT 59.962 50.000 0.00 0.00 42.67 3.73
3341 4106 1.002544 GGAATCTAGATGCCCCTTCCG 59.997 57.143 18.31 0.00 29.64 4.30
3361 4126 0.595588 TGTGCACGCAATTTACCAGG 59.404 50.000 13.13 0.00 0.00 4.45
3373 4138 3.730761 GCCTTGGCTCTGTGCACG 61.731 66.667 13.13 7.36 45.15 5.34
3390 4155 2.099921 CCATCAGTAGTCCACCTCTTCG 59.900 54.545 0.00 0.00 0.00 3.79
3395 4160 4.620723 TGATTACCATCAGTAGTCCACCT 58.379 43.478 0.00 0.00 36.98 4.00
3415 4180 1.100510 CGAACCACTAGGACCGATGA 58.899 55.000 0.00 0.00 38.69 2.92
3427 4192 2.978010 CCCTGGCACACGAACCAC 60.978 66.667 0.00 0.00 0.00 4.16
3441 4206 0.823356 GACACCATGTTGTGCACCCT 60.823 55.000 15.69 0.00 39.93 4.34
3443 4208 1.282570 CGACACCATGTTGTGCACC 59.717 57.895 15.69 0.00 39.93 5.01
3444 4209 1.370414 GCGACACCATGTTGTGCAC 60.370 57.895 10.75 10.75 39.93 4.57
3449 4214 1.492873 CTCGTGCGACACCATGTTG 59.507 57.895 4.73 0.00 34.88 3.33
3483 4248 6.585702 CCAAATTCGACTATAGATGCTCTGAG 59.414 42.308 6.78 0.00 0.00 3.35
3496 4261 7.149307 GGGTCAAATTTTTCCAAATTCGACTA 58.851 34.615 10.01 0.00 42.44 2.59
3499 4264 5.301555 GGGGTCAAATTTTTCCAAATTCGA 58.698 37.500 9.66 0.00 41.02 3.71
3500 4265 4.454161 GGGGGTCAAATTTTTCCAAATTCG 59.546 41.667 9.66 0.00 41.02 3.34
3502 4267 5.133491 TGAGGGGGTCAAATTTTTCCAAATT 59.867 36.000 9.66 0.00 43.29 1.82
3517 4282 2.440247 CGGGCATTTGAGGGGGTC 60.440 66.667 0.00 0.00 0.00 4.46
3529 4294 4.015406 AATCACTGTCCGCGGGCA 62.015 61.111 33.19 33.19 0.00 5.36
3531 4296 2.819595 CCAATCACTGTCCGCGGG 60.820 66.667 27.83 12.37 0.00 6.13
3534 4299 4.693532 TGACCAATCACTGTCCGC 57.306 55.556 0.00 0.00 0.00 5.54
3542 4307 2.503331 AGTTTGATGCGTGACCAATCA 58.497 42.857 0.00 0.00 0.00 2.57
3543 4308 3.559238 AAGTTTGATGCGTGACCAATC 57.441 42.857 0.00 0.00 0.00 2.67
3544 4309 5.401550 CATTAAGTTTGATGCGTGACCAAT 58.598 37.500 0.00 0.00 0.00 3.16
3545 4310 4.793071 CATTAAGTTTGATGCGTGACCAA 58.207 39.130 0.00 0.00 0.00 3.67
3546 4311 3.365868 GCATTAAGTTTGATGCGTGACCA 60.366 43.478 5.95 0.00 39.77 4.02
3547 4312 3.171277 GCATTAAGTTTGATGCGTGACC 58.829 45.455 5.95 0.00 39.77 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.