Multiple sequence alignment - TraesCS5A01G274800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G274800 chr5A 100.000 4729 0 0 1 4729 484430365 484435093 0.000000e+00 8733.0
1 TraesCS5A01G274800 chr5A 82.469 405 60 7 4248 4644 532568583 532568182 1.260000e-90 344.0
2 TraesCS5A01G274800 chr5A 100.000 29 0 0 705 733 484430982 484431010 2.000000e-03 54.7
3 TraesCS5A01G274800 chr5A 100.000 29 0 0 618 646 484431069 484431097 2.000000e-03 54.7
4 TraesCS5A01G274800 chr5B 91.913 3524 182 50 823 4295 460474333 460477804 0.000000e+00 4833.0
5 TraesCS5A01G274800 chr5B 91.589 428 22 6 4290 4706 460489286 460489710 3.170000e-161 579.0
6 TraesCS5A01G274800 chr5B 82.822 326 54 2 1 325 479699287 479698963 1.660000e-74 291.0
7 TraesCS5A01G274800 chr5D 92.436 3239 132 44 734 3888 384012705 384015914 0.000000e+00 4519.0
8 TraesCS5A01G274800 chr5D 93.179 689 43 2 1 688 463910366 463909681 0.000000e+00 1009.0
9 TraesCS5A01G274800 chr5D 94.444 36 0 2 705 740 463909752 463909719 2.000000e-03 54.7
10 TraesCS5A01G274800 chr6B 92.462 597 42 2 1 597 75022273 75021680 0.000000e+00 850.0
11 TraesCS5A01G274800 chr7A 88.841 690 57 12 1 688 128844102 128843431 0.000000e+00 830.0
12 TraesCS5A01G274800 chr7A 88.281 640 73 2 1 639 634691549 634692187 0.000000e+00 765.0
13 TraesCS5A01G274800 chr7A 94.444 36 0 2 705 740 128843502 128843469 2.000000e-03 54.7
14 TraesCS5A01G274800 chr1B 87.971 690 77 5 1 688 514183313 514182628 0.000000e+00 809.0
15 TraesCS5A01G274800 chr1B 82.688 439 68 5 2 439 629150439 629150008 2.670000e-102 383.0
16 TraesCS5A01G274800 chr1B 81.235 405 65 6 4248 4644 104737566 104737967 2.750000e-82 316.0
17 TraesCS5A01G274800 chr7B 86.850 692 86 4 1 691 35303755 35303068 0.000000e+00 769.0
18 TraesCS5A01G274800 chr7D 84.052 696 103 5 1 691 497903952 497903260 0.000000e+00 664.0
19 TraesCS5A01G274800 chr7D 81.481 405 64 6 4248 4644 9172615 9173016 5.900000e-84 322.0
20 TraesCS5A01G274800 chr2A 83.141 433 64 3 2 434 90021169 90020746 2.060000e-103 387.0
21 TraesCS5A01G274800 chr6D 83.709 399 53 7 4248 4638 6962787 6963181 2.690000e-97 366.0
22 TraesCS5A01G274800 chr6D 92.308 39 3 0 4663 4701 6963183 6963221 6.610000e-04 56.5
23 TraesCS5A01G274800 chr3D 83.459 399 54 7 4248 4638 586747215 586747609 1.250000e-95 361.0
24 TraesCS5A01G274800 chr3D 82.957 399 56 8 4248 4638 586758798 586758404 2.710000e-92 350.0
25 TraesCS5A01G274800 chr3D 92.308 39 3 0 4663 4701 586758402 586758364 6.610000e-04 56.5
26 TraesCS5A01G274800 chr4A 79.616 417 75 10 1 412 611056486 611056075 1.660000e-74 291.0
27 TraesCS5A01G274800 chr3B 84.589 292 38 5 4248 4534 730732993 730732704 2.790000e-72 283.0
28 TraesCS5A01G274800 chr2D 84.483 290 42 1 4248 4534 172970720 172971009 2.790000e-72 283.0
29 TraesCS5A01G274800 chr6A 80.632 253 36 6 4393 4638 6596114 6596360 2.910000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G274800 chr5A 484430365 484435093 4728 False 8733.00 8733 100.0000 1 4729 1 chr5A.!!$F1 4728
1 TraesCS5A01G274800 chr5B 460474333 460477804 3471 False 4833.00 4833 91.9130 823 4295 1 chr5B.!!$F1 3472
2 TraesCS5A01G274800 chr5D 384012705 384015914 3209 False 4519.00 4519 92.4360 734 3888 1 chr5D.!!$F1 3154
3 TraesCS5A01G274800 chr5D 463909681 463910366 685 True 531.85 1009 93.8115 1 740 2 chr5D.!!$R1 739
4 TraesCS5A01G274800 chr6B 75021680 75022273 593 True 850.00 850 92.4620 1 597 1 chr6B.!!$R1 596
5 TraesCS5A01G274800 chr7A 634691549 634692187 638 False 765.00 765 88.2810 1 639 1 chr7A.!!$F1 638
6 TraesCS5A01G274800 chr7A 128843431 128844102 671 True 442.35 830 91.6425 1 740 2 chr7A.!!$R1 739
7 TraesCS5A01G274800 chr1B 514182628 514183313 685 True 809.00 809 87.9710 1 688 1 chr1B.!!$R1 687
8 TraesCS5A01G274800 chr7B 35303068 35303755 687 True 769.00 769 86.8500 1 691 1 chr7B.!!$R1 690
9 TraesCS5A01G274800 chr7D 497903260 497903952 692 True 664.00 664 84.0520 1 691 1 chr7D.!!$R1 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
664 686 0.182299 GGCCTCCTCTTCCTCCATTG 59.818 60.0 0.0 0.0 0.0 2.82 F
1341 1385 0.178767 TGATGTGGCTGATTCGAGGG 59.821 55.0 0.0 0.0 0.0 4.30 F
2278 2345 0.036765 TGGTACGGTTCATCAGTGGC 60.037 55.0 0.0 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2261 2328 0.108992 TCGCCACTGATGAACCGTAC 60.109 55.0 0.00 0.0 0.0 3.67 R
3295 3404 0.527817 CCAGCTAATCGACGGTCCAC 60.528 60.0 1.91 0.0 0.0 4.02 R
4028 4153 0.545309 CTTCTCCACCTCCTCCCACA 60.545 60.0 0.00 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 7.119997 CGATAACCTCAAGCTTTATTTCTTCG 58.880 38.462 0.00 0.00 0.00 3.79
53 54 6.635030 ACCTCAAGCTTTATTTCTTCGTTT 57.365 33.333 0.00 0.00 0.00 3.60
93 94 5.657302 CCACCACTTCTACCAGAACTACTAT 59.343 44.000 0.00 0.00 29.89 2.12
276 277 2.209838 TAGCAGACTCATTGCGCTAC 57.790 50.000 9.73 0.00 45.98 3.58
339 354 0.955428 TTGGTCACCGCTGCATTCTC 60.955 55.000 0.00 0.00 0.00 2.87
341 356 1.078848 GTCACCGCTGCATTCTCCT 60.079 57.895 0.00 0.00 0.00 3.69
444 459 2.193536 GTGGAAGCAGCAACGGGTT 61.194 57.895 0.00 0.00 0.00 4.11
445 460 2.192861 TGGAAGCAGCAACGGGTTG 61.193 57.895 7.18 7.18 43.14 3.77
446 461 2.193536 GGAAGCAGCAACGGGTTGT 61.194 57.895 12.65 0.00 42.31 3.32
653 675 4.154347 CTCTGCCACGGCCTCCTC 62.154 72.222 5.42 0.00 41.09 3.71
654 676 4.704103 TCTGCCACGGCCTCCTCT 62.704 66.667 5.42 0.00 41.09 3.69
655 677 3.710722 CTGCCACGGCCTCCTCTT 61.711 66.667 5.42 0.00 41.09 2.85
656 678 3.672295 CTGCCACGGCCTCCTCTTC 62.672 68.421 5.42 0.00 41.09 2.87
657 679 4.475135 GCCACGGCCTCCTCTTCC 62.475 72.222 0.00 0.00 34.56 3.46
658 680 2.685380 CCACGGCCTCCTCTTCCT 60.685 66.667 0.00 0.00 0.00 3.36
659 681 2.726351 CCACGGCCTCCTCTTCCTC 61.726 68.421 0.00 0.00 0.00 3.71
660 682 2.364448 ACGGCCTCCTCTTCCTCC 60.364 66.667 0.00 0.00 0.00 4.30
661 683 2.364317 CGGCCTCCTCTTCCTCCA 60.364 66.667 0.00 0.00 0.00 3.86
662 684 1.764054 CGGCCTCCTCTTCCTCCAT 60.764 63.158 0.00 0.00 0.00 3.41
663 685 1.341156 CGGCCTCCTCTTCCTCCATT 61.341 60.000 0.00 0.00 0.00 3.16
664 686 0.182299 GGCCTCCTCTTCCTCCATTG 59.818 60.000 0.00 0.00 0.00 2.82
665 687 0.465278 GCCTCCTCTTCCTCCATTGC 60.465 60.000 0.00 0.00 0.00 3.56
666 688 1.211456 CCTCCTCTTCCTCCATTGCT 58.789 55.000 0.00 0.00 0.00 3.91
667 689 1.134159 CCTCCTCTTCCTCCATTGCTG 60.134 57.143 0.00 0.00 0.00 4.41
668 690 1.558756 CTCCTCTTCCTCCATTGCTGT 59.441 52.381 0.00 0.00 0.00 4.40
669 691 1.556911 TCCTCTTCCTCCATTGCTGTC 59.443 52.381 0.00 0.00 0.00 3.51
670 692 1.280133 CCTCTTCCTCCATTGCTGTCA 59.720 52.381 0.00 0.00 0.00 3.58
671 693 2.290514 CCTCTTCCTCCATTGCTGTCAA 60.291 50.000 0.00 0.00 36.51 3.18
672 694 2.746362 CTCTTCCTCCATTGCTGTCAAC 59.254 50.000 0.00 0.00 34.60 3.18
673 695 2.373169 TCTTCCTCCATTGCTGTCAACT 59.627 45.455 0.00 0.00 34.60 3.16
674 696 2.957402 TCCTCCATTGCTGTCAACTT 57.043 45.000 0.00 0.00 34.60 2.66
675 697 2.507484 TCCTCCATTGCTGTCAACTTG 58.493 47.619 0.00 0.00 34.60 3.16
701 723 4.425772 TCCTCTTCCTCCATTACTGTCAA 58.574 43.478 0.00 0.00 0.00 3.18
704 726 5.407407 TCTTCCTCCATTACTGTCAACTC 57.593 43.478 0.00 0.00 0.00 3.01
715 737 1.446272 GTCAACTCGCCCTCTTCCG 60.446 63.158 0.00 0.00 0.00 4.30
716 738 2.125512 CAACTCGCCCTCTTCCGG 60.126 66.667 0.00 0.00 0.00 5.14
717 739 2.283676 AACTCGCCCTCTTCCGGA 60.284 61.111 0.00 0.00 0.00 5.14
768 790 3.181490 GGTGATACCCCGCAAGAAAAATC 60.181 47.826 0.00 0.00 32.30 2.17
851 890 4.143333 TACAGCGAGCGCCCTTCC 62.143 66.667 11.66 0.00 43.17 3.46
1261 1305 0.886938 TCTGGATCGAGGAGCTAGCG 60.887 60.000 9.55 0.00 0.00 4.26
1264 1308 1.601197 GATCGAGGAGCTAGCGGGA 60.601 63.158 9.55 3.98 0.00 5.14
1281 1325 1.615384 GGGAGCTTGCCTGTTTGAGAT 60.615 52.381 0.00 0.00 0.00 2.75
1290 1334 6.349611 GCTTGCCTGTTTGAGATTTCTGATAA 60.350 38.462 0.00 0.00 0.00 1.75
1328 1372 0.673956 AGCTGCTGTCTGCTGATGTG 60.674 55.000 0.00 0.00 44.34 3.21
1335 1379 1.003928 TGTCTGCTGATGTGGCTGATT 59.996 47.619 0.00 0.00 39.20 2.57
1341 1385 0.178767 TGATGTGGCTGATTCGAGGG 59.821 55.000 0.00 0.00 0.00 4.30
1342 1386 0.179000 GATGTGGCTGATTCGAGGGT 59.821 55.000 0.00 0.00 0.00 4.34
1527 1571 4.966965 TCAGTCGAGCTTAGTCCTTTAG 57.033 45.455 0.00 0.00 0.00 1.85
1551 1598 5.426325 AGTTAGGATCCAGAATAGAGGGT 57.574 43.478 15.82 0.00 0.00 4.34
1552 1599 5.151454 AGTTAGGATCCAGAATAGAGGGTG 58.849 45.833 15.82 0.00 0.00 4.61
1580 1627 2.604914 GCAGTATTGTGATGGACGTCAG 59.395 50.000 18.91 0.00 0.00 3.51
1603 1652 1.228862 GTGGGTTGGCAGGGTTGAT 60.229 57.895 0.00 0.00 0.00 2.57
1689 1739 7.450074 AGTGTATACCTTTGTGACATTCTTGA 58.550 34.615 0.00 0.00 0.00 3.02
1690 1740 8.103305 AGTGTATACCTTTGTGACATTCTTGAT 58.897 33.333 0.00 0.00 0.00 2.57
1826 1876 4.288366 TCCATGATAGTTCCACAGGTTCAA 59.712 41.667 0.00 0.00 0.00 2.69
2086 2139 4.926140 TCATGTACAAATGTGTGCCAAA 57.074 36.364 0.00 0.00 39.43 3.28
2090 2143 6.423302 TCATGTACAAATGTGTGCCAAATTTC 59.577 34.615 0.00 0.00 39.43 2.17
2138 2191 5.514274 TGTTGTTTCCATTGAAGGAACTC 57.486 39.130 0.00 0.00 46.85 3.01
2151 2204 5.123227 TGAAGGAACTCGTGATTTTCACTT 58.877 37.500 6.13 0.00 41.51 3.16
2217 2270 4.869297 TGTTTCACTGAACATTTTGGCTTG 59.131 37.500 0.00 0.00 34.77 4.01
2224 2277 2.514205 ACATTTTGGCTTGAGTGCAC 57.486 45.000 9.40 9.40 34.04 4.57
2261 2328 1.270550 GTGCTTCAATGGTGAACCTGG 59.729 52.381 0.37 0.00 38.88 4.45
2265 2332 2.465860 TCAATGGTGAACCTGGTACG 57.534 50.000 0.00 0.00 36.82 3.67
2278 2345 0.036765 TGGTACGGTTCATCAGTGGC 60.037 55.000 0.00 0.00 0.00 5.01
2440 2529 1.833630 TCTGGACTGTGATCATGGGAC 59.166 52.381 0.00 0.00 0.00 4.46
2450 2539 5.630121 TGTGATCATGGGACTTTTTGTAGT 58.370 37.500 0.00 0.00 0.00 2.73
2451 2540 6.774673 TGTGATCATGGGACTTTTTGTAGTA 58.225 36.000 0.00 0.00 0.00 1.82
2452 2541 6.653320 TGTGATCATGGGACTTTTTGTAGTAC 59.347 38.462 0.00 0.00 0.00 2.73
2453 2542 6.653320 GTGATCATGGGACTTTTTGTAGTACA 59.347 38.462 0.00 0.00 30.06 2.90
2454 2543 7.174253 GTGATCATGGGACTTTTTGTAGTACAA 59.826 37.037 11.75 11.75 36.11 2.41
2455 2544 6.870971 TCATGGGACTTTTTGTAGTACAAC 57.129 37.500 15.31 3.84 37.90 3.32
2533 2632 2.558359 GGGGTTTATGGCTGATGTATGC 59.442 50.000 0.00 0.00 0.00 3.14
2586 2685 6.228258 TGTTTTCTTACGATCTTAGCCTTGT 58.772 36.000 0.00 0.00 0.00 3.16
2772 2872 6.442541 TTCCAGGGTCTAAATGTCTTAACA 57.557 37.500 0.00 0.00 40.38 2.41
3007 3113 4.576463 CCAGCAATGGTATGAGAACCTTAC 59.424 45.833 0.00 0.00 40.44 2.34
3016 3122 8.375493 TGGTATGAGAACCTTACTCTGTATTT 57.625 34.615 0.00 0.00 40.44 1.40
3058 3164 8.015185 ACCCTGTCTTATACATATAAACGTGT 57.985 34.615 0.00 0.00 37.50 4.49
3113 3219 7.969508 TCACACACATAAGATAATGCACATTTG 59.030 33.333 0.47 0.00 32.50 2.32
3129 3235 5.220453 GCACATTTGTTTTATATGCACTGCC 60.220 40.000 0.00 0.00 0.00 4.85
3137 3244 7.936584 TGTTTTATATGCACTGCCCTTATAAC 58.063 34.615 0.00 0.95 0.00 1.89
3154 3261 9.669353 CCCTTATAACAAATCAGATCGAATTTG 57.331 33.333 23.25 23.25 39.24 2.32
3206 3315 3.956199 AGCTTGTATGGATGATGTTTGGG 59.044 43.478 0.00 0.00 0.00 4.12
3212 3321 2.538222 TGGATGATGTTTGGGTTGCAT 58.462 42.857 0.00 0.00 0.00 3.96
3265 3374 9.950496 ATTTGTATAGTGAGGATATTGGTGATC 57.050 33.333 0.00 0.00 0.00 2.92
3278 3387 5.751243 ATTGGTGATCGCTGTTATTTACC 57.249 39.130 6.18 0.00 0.00 2.85
3285 3394 3.929094 TCGCTGTTATTTACCGACCTTT 58.071 40.909 0.00 0.00 0.00 3.11
3295 3404 5.637006 TTTACCGACCTTTGATCATTTGG 57.363 39.130 0.00 1.81 0.00 3.28
3300 3409 3.119849 CGACCTTTGATCATTTGGTGGAC 60.120 47.826 16.28 5.08 0.00 4.02
3306 3415 0.611200 ATCATTTGGTGGACCGTCGA 59.389 50.000 0.00 0.00 39.43 4.20
3348 3457 8.761575 TTCAAATTTGATTGAAATGCTACTCC 57.238 30.769 21.10 0.00 44.11 3.85
3356 3465 6.267471 TGATTGAAATGCTACTCCAGGTTTTT 59.733 34.615 0.00 0.00 0.00 1.94
3378 3487 4.820284 AGTAGCTTTTCAAGTGTTCTGC 57.180 40.909 0.00 0.00 0.00 4.26
3401 3510 2.367030 GCATTGGCATTGCAACTGTA 57.633 45.000 24.90 0.00 39.90 2.74
3414 3523 2.159462 GCAACTGTATGCTTTCCTCTGC 60.159 50.000 7.42 0.00 43.06 4.26
3481 3590 1.133823 TGCCCTTGTGTCATTCTGTGT 60.134 47.619 0.00 0.00 0.00 3.72
3523 3633 6.051717 TGATGTTTTACAATGTTTGGGTTGG 58.948 36.000 0.00 0.00 34.12 3.77
3526 3636 5.875359 TGTTTTACAATGTTTGGGTTGGTTC 59.125 36.000 0.00 0.00 34.12 3.62
3530 3640 7.604657 TTACAATGTTTGGGTTGGTTCTTAT 57.395 32.000 0.00 0.00 34.12 1.73
3544 3654 7.418139 GGTTGGTTCTTATTGTTGGTTTTACCT 60.418 37.037 0.00 0.00 39.58 3.08
3574 3684 8.988934 TGTTTCAGTGATTTATCTGTGTTAGAC 58.011 33.333 0.00 0.00 38.49 2.59
3578 3688 9.856488 TCAGTGATTTATCTGTGTTAGACTTAC 57.144 33.333 0.00 0.00 38.49 2.34
3861 3986 8.750416 CGTGAGATATCTTTTTCACTCATGTAG 58.250 37.037 16.43 0.00 38.18 2.74
3991 4116 0.031857 TGTCCGCATTTGCTGTTTGG 59.968 50.000 0.51 0.00 39.32 3.28
4014 4139 6.589523 TGGAAATTGCCTGAAAATGTAATTCG 59.410 34.615 3.49 0.00 33.67 3.34
4028 4153 6.834168 ATGTAATTCGGGTCAGTCAATTTT 57.166 33.333 0.00 0.00 0.00 1.82
4032 4157 2.226330 TCGGGTCAGTCAATTTTGTGG 58.774 47.619 0.00 0.00 0.00 4.17
4056 4182 4.115199 GTGGAGAAGGGGCGCCAT 62.115 66.667 30.85 14.02 39.91 4.40
4058 4184 4.115199 GGAGAAGGGGCGCCATGT 62.115 66.667 30.85 12.49 0.00 3.21
4128 4254 0.979665 TGCAGGAGAAGAGGAGGTTG 59.020 55.000 0.00 0.00 0.00 3.77
4175 4301 6.575244 AGTCCTATTGTGATCCAATGGTTA 57.425 37.500 15.59 4.93 43.63 2.85
4200 4326 0.962356 ATCGGCTCACTTTTGCCTGG 60.962 55.000 0.00 0.00 46.42 4.45
4263 4389 4.672587 AACAGTGTGACTTTGCTAGAGA 57.327 40.909 0.00 0.00 0.00 3.10
4295 4421 4.627015 TGCCCATCCTTAGTACCTTAGAA 58.373 43.478 0.00 0.00 0.00 2.10
4296 4422 4.654262 TGCCCATCCTTAGTACCTTAGAAG 59.346 45.833 0.00 0.00 0.00 2.85
4297 4423 4.654724 GCCCATCCTTAGTACCTTAGAAGT 59.345 45.833 0.00 0.00 0.00 3.01
4298 4424 5.453480 GCCCATCCTTAGTACCTTAGAAGTG 60.453 48.000 0.00 0.00 0.00 3.16
4299 4425 5.897824 CCCATCCTTAGTACCTTAGAAGTGA 59.102 44.000 0.00 0.00 0.00 3.41
4300 4426 6.555360 CCCATCCTTAGTACCTTAGAAGTGAT 59.445 42.308 0.00 0.00 0.00 3.06
4301 4427 7.256012 CCCATCCTTAGTACCTTAGAAGTGATC 60.256 44.444 0.00 0.00 0.00 2.92
4302 4428 7.507616 CCATCCTTAGTACCTTAGAAGTGATCT 59.492 40.741 0.00 0.00 42.48 2.75
4303 4429 8.919145 CATCCTTAGTACCTTAGAAGTGATCTT 58.081 37.037 0.00 0.00 39.71 2.40
4304 4430 8.896722 TCCTTAGTACCTTAGAAGTGATCTTT 57.103 34.615 0.00 0.00 39.71 2.52
4305 4431 9.322769 TCCTTAGTACCTTAGAAGTGATCTTTT 57.677 33.333 0.00 0.00 39.71 2.27
4310 4436 9.930693 AGTACCTTAGAAGTGATCTTTTAACTG 57.069 33.333 0.00 0.00 39.71 3.16
4311 4437 9.924650 GTACCTTAGAAGTGATCTTTTAACTGA 57.075 33.333 0.00 0.00 39.71 3.41
4313 4439 9.847224 ACCTTAGAAGTGATCTTTTAACTGAAA 57.153 29.630 0.00 0.00 39.71 2.69
4329 4455 9.773328 TTTAACTGAAAATCATCTTTCTATGCG 57.227 29.630 0.00 0.00 36.46 4.73
4330 4456 7.615582 AACTGAAAATCATCTTTCTATGCGA 57.384 32.000 0.00 0.00 36.46 5.10
4331 4457 7.615582 ACTGAAAATCATCTTTCTATGCGAA 57.384 32.000 0.00 0.00 36.46 4.70
4332 4458 7.692088 ACTGAAAATCATCTTTCTATGCGAAG 58.308 34.615 0.00 0.00 36.46 3.79
4333 4459 7.335422 ACTGAAAATCATCTTTCTATGCGAAGT 59.665 33.333 0.00 0.00 36.46 3.01
4334 4460 7.466805 TGAAAATCATCTTTCTATGCGAAGTG 58.533 34.615 0.00 0.00 36.46 3.16
4335 4461 6.992063 AAATCATCTTTCTATGCGAAGTGT 57.008 33.333 0.00 0.00 32.21 3.55
4336 4462 6.992063 AATCATCTTTCTATGCGAAGTGTT 57.008 33.333 0.00 0.00 32.21 3.32
4337 4463 8.492673 AAATCATCTTTCTATGCGAAGTGTTA 57.507 30.769 0.00 0.00 32.21 2.41
4338 4464 8.668510 AATCATCTTTCTATGCGAAGTGTTAT 57.331 30.769 0.00 0.00 32.21 1.89
4339 4465 9.764363 AATCATCTTTCTATGCGAAGTGTTATA 57.236 29.630 0.00 0.00 32.21 0.98
4340 4466 8.575565 TCATCTTTCTATGCGAAGTGTTATAC 57.424 34.615 0.00 0.00 32.21 1.47
4341 4467 8.414003 TCATCTTTCTATGCGAAGTGTTATACT 58.586 33.333 0.00 0.00 42.89 2.12
4342 4468 9.678941 CATCTTTCTATGCGAAGTGTTATACTA 57.321 33.333 0.00 0.00 39.18 1.82
4343 4469 9.900710 ATCTTTCTATGCGAAGTGTTATACTAG 57.099 33.333 0.00 0.00 39.18 2.57
4344 4470 7.861372 TCTTTCTATGCGAAGTGTTATACTAGC 59.139 37.037 0.00 3.43 39.18 3.42
4345 4471 6.010294 TCTATGCGAAGTGTTATACTAGCC 57.990 41.667 6.93 0.00 40.39 3.93
4346 4472 3.447918 TGCGAAGTGTTATACTAGCCC 57.552 47.619 6.93 0.00 40.39 5.19
4347 4473 3.028850 TGCGAAGTGTTATACTAGCCCT 58.971 45.455 6.93 0.00 40.39 5.19
4348 4474 3.181479 TGCGAAGTGTTATACTAGCCCTG 60.181 47.826 6.93 0.00 40.39 4.45
4349 4475 3.381949 CGAAGTGTTATACTAGCCCTGC 58.618 50.000 0.00 0.00 39.18 4.85
4350 4476 3.068307 CGAAGTGTTATACTAGCCCTGCT 59.932 47.826 0.00 0.00 39.18 4.24
4351 4477 4.441634 CGAAGTGTTATACTAGCCCTGCTT 60.442 45.833 0.00 0.00 39.18 3.91
4352 4478 5.221185 CGAAGTGTTATACTAGCCCTGCTTA 60.221 44.000 0.00 0.00 39.18 3.09
4353 4479 6.555463 AAGTGTTATACTAGCCCTGCTTAA 57.445 37.500 0.00 0.00 39.18 1.85
4354 4480 6.749036 AGTGTTATACTAGCCCTGCTTAAT 57.251 37.500 0.00 0.00 40.44 1.40
4355 4481 7.850935 AGTGTTATACTAGCCCTGCTTAATA 57.149 36.000 0.00 0.00 40.44 0.98
4356 4482 8.437274 AGTGTTATACTAGCCCTGCTTAATAT 57.563 34.615 0.00 0.00 40.44 1.28
4357 4483 8.314751 AGTGTTATACTAGCCCTGCTTAATATG 58.685 37.037 0.00 0.00 40.44 1.78
4358 4484 7.549488 GTGTTATACTAGCCCTGCTTAATATGG 59.451 40.741 0.00 0.00 40.44 2.74
4359 4485 7.456585 TGTTATACTAGCCCTGCTTAATATGGA 59.543 37.037 0.00 0.00 40.44 3.41
4360 4486 4.625607 ACTAGCCCTGCTTAATATGGAC 57.374 45.455 0.00 0.00 40.44 4.02
4361 4487 2.959465 AGCCCTGCTTAATATGGACC 57.041 50.000 0.00 0.00 33.89 4.46
4362 4488 2.135189 AGCCCTGCTTAATATGGACCA 58.865 47.619 0.00 0.00 33.89 4.02
4363 4489 2.158608 AGCCCTGCTTAATATGGACCAC 60.159 50.000 0.00 0.00 33.89 4.16
4364 4490 2.863809 CCCTGCTTAATATGGACCACC 58.136 52.381 0.00 0.00 0.00 4.61
4365 4491 2.489073 CCCTGCTTAATATGGACCACCC 60.489 54.545 0.00 0.00 34.81 4.61
4374 4500 3.472237 TGGACCACCCATTTGCAAT 57.528 47.368 0.00 0.00 40.82 3.56
4375 4501 1.727062 TGGACCACCCATTTGCAATT 58.273 45.000 0.00 0.00 40.82 2.32
4376 4502 2.894731 TGGACCACCCATTTGCAATTA 58.105 42.857 0.00 0.00 40.82 1.40
4377 4503 3.448934 TGGACCACCCATTTGCAATTAT 58.551 40.909 0.00 0.00 40.82 1.28
4378 4504 4.614475 TGGACCACCCATTTGCAATTATA 58.386 39.130 0.00 0.00 40.82 0.98
4379 4505 4.404073 TGGACCACCCATTTGCAATTATAC 59.596 41.667 0.00 0.00 40.82 1.47
4380 4506 4.202212 GGACCACCCATTTGCAATTATACC 60.202 45.833 0.00 0.00 34.14 2.73
4381 4507 3.709141 ACCACCCATTTGCAATTATACCC 59.291 43.478 0.00 0.00 0.00 3.69
4382 4508 3.708631 CCACCCATTTGCAATTATACCCA 59.291 43.478 0.00 0.00 0.00 4.51
4383 4509 4.163078 CCACCCATTTGCAATTATACCCAA 59.837 41.667 0.00 0.00 0.00 4.12
4384 4510 5.163216 CCACCCATTTGCAATTATACCCAAT 60.163 40.000 0.00 0.00 0.00 3.16
4385 4511 6.042552 CCACCCATTTGCAATTATACCCAATA 59.957 38.462 0.00 0.00 0.00 1.90
4386 4512 7.256619 CCACCCATTTGCAATTATACCCAATAT 60.257 37.037 0.00 0.00 0.00 1.28
4387 4513 8.156165 CACCCATTTGCAATTATACCCAATATT 58.844 33.333 0.00 0.00 0.00 1.28
4388 4514 8.722422 ACCCATTTGCAATTATACCCAATATTT 58.278 29.630 0.00 0.00 0.00 1.40
4389 4515 9.571816 CCCATTTGCAATTATACCCAATATTTT 57.428 29.630 0.00 0.00 0.00 1.82
4404 4530 9.889128 ACCCAATATTTTCAATTTTCTATGGTG 57.111 29.630 0.00 0.00 0.00 4.17
4405 4531 9.889128 CCCAATATTTTCAATTTTCTATGGTGT 57.111 29.630 0.00 0.00 0.00 4.16
4417 4543 9.574516 AATTTTCTATGGTGTATATGGAAGTCC 57.425 33.333 0.00 0.00 0.00 3.85
4430 4556 3.942829 TGGAAGTCCAGATGTGATTGTC 58.057 45.455 0.00 0.00 42.01 3.18
4431 4557 3.584406 TGGAAGTCCAGATGTGATTGTCT 59.416 43.478 0.00 0.00 42.01 3.41
4432 4558 4.042062 TGGAAGTCCAGATGTGATTGTCTT 59.958 41.667 0.00 0.00 42.01 3.01
4433 4559 5.006386 GGAAGTCCAGATGTGATTGTCTTT 58.994 41.667 0.00 0.00 35.64 2.52
4434 4560 5.474876 GGAAGTCCAGATGTGATTGTCTTTT 59.525 40.000 0.00 0.00 35.64 2.27
4435 4561 6.015940 GGAAGTCCAGATGTGATTGTCTTTTT 60.016 38.462 0.00 0.00 35.64 1.94
4436 4562 6.323203 AGTCCAGATGTGATTGTCTTTTTG 57.677 37.500 0.00 0.00 0.00 2.44
4437 4563 6.064060 AGTCCAGATGTGATTGTCTTTTTGA 58.936 36.000 0.00 0.00 0.00 2.69
4438 4564 6.718454 AGTCCAGATGTGATTGTCTTTTTGAT 59.282 34.615 0.00 0.00 0.00 2.57
4439 4565 7.884877 AGTCCAGATGTGATTGTCTTTTTGATA 59.115 33.333 0.00 0.00 0.00 2.15
4440 4566 8.180267 GTCCAGATGTGATTGTCTTTTTGATAG 58.820 37.037 0.00 0.00 0.00 2.08
4441 4567 7.337689 TCCAGATGTGATTGTCTTTTTGATAGG 59.662 37.037 0.00 0.00 0.00 2.57
4442 4568 7.337689 CCAGATGTGATTGTCTTTTTGATAGGA 59.662 37.037 0.00 0.00 0.00 2.94
4443 4569 8.396390 CAGATGTGATTGTCTTTTTGATAGGAG 58.604 37.037 0.00 0.00 0.00 3.69
4444 4570 7.555554 AGATGTGATTGTCTTTTTGATAGGAGG 59.444 37.037 0.00 0.00 0.00 4.30
4445 4571 5.415701 TGTGATTGTCTTTTTGATAGGAGGC 59.584 40.000 0.00 0.00 0.00 4.70
4446 4572 4.635765 TGATTGTCTTTTTGATAGGAGGCG 59.364 41.667 0.00 0.00 0.00 5.52
4447 4573 2.356135 TGTCTTTTTGATAGGAGGCGC 58.644 47.619 0.00 0.00 0.00 6.53
4448 4574 1.671328 GTCTTTTTGATAGGAGGCGCC 59.329 52.381 21.89 21.89 0.00 6.53
4458 4584 3.075005 GAGGCGCCTACTCCCACA 61.075 66.667 32.97 0.00 0.00 4.17
4459 4585 3.372554 GAGGCGCCTACTCCCACAC 62.373 68.421 32.97 9.97 0.00 3.82
4460 4586 4.468689 GGCGCCTACTCCCACACC 62.469 72.222 22.15 0.00 0.00 4.16
4461 4587 3.702048 GCGCCTACTCCCACACCA 61.702 66.667 0.00 0.00 0.00 4.17
4462 4588 2.579201 CGCCTACTCCCACACCAG 59.421 66.667 0.00 0.00 0.00 4.00
4463 4589 1.982395 CGCCTACTCCCACACCAGA 60.982 63.158 0.00 0.00 0.00 3.86
4464 4590 1.330655 CGCCTACTCCCACACCAGAT 61.331 60.000 0.00 0.00 0.00 2.90
4465 4591 1.789523 GCCTACTCCCACACCAGATA 58.210 55.000 0.00 0.00 0.00 1.98
4466 4592 1.413077 GCCTACTCCCACACCAGATAC 59.587 57.143 0.00 0.00 0.00 2.24
4467 4593 2.747177 CCTACTCCCACACCAGATACA 58.253 52.381 0.00 0.00 0.00 2.29
4468 4594 2.431057 CCTACTCCCACACCAGATACAC 59.569 54.545 0.00 0.00 0.00 2.90
4469 4595 2.024176 ACTCCCACACCAGATACACA 57.976 50.000 0.00 0.00 0.00 3.72
4470 4596 2.334977 ACTCCCACACCAGATACACAA 58.665 47.619 0.00 0.00 0.00 3.33
4471 4597 2.303022 ACTCCCACACCAGATACACAAG 59.697 50.000 0.00 0.00 0.00 3.16
4472 4598 1.628340 TCCCACACCAGATACACAAGG 59.372 52.381 0.00 0.00 0.00 3.61
4473 4599 1.453155 CCACACCAGATACACAAGGC 58.547 55.000 0.00 0.00 0.00 4.35
4474 4600 1.003580 CCACACCAGATACACAAGGCT 59.996 52.381 0.00 0.00 0.00 4.58
4475 4601 2.079158 CACACCAGATACACAAGGCTG 58.921 52.381 0.00 0.00 0.00 4.85
4476 4602 1.089920 CACCAGATACACAAGGCTGC 58.910 55.000 0.00 0.00 0.00 5.25
4477 4603 0.035056 ACCAGATACACAAGGCTGCC 60.035 55.000 11.65 11.65 0.00 4.85
4478 4604 0.254178 CCAGATACACAAGGCTGCCT 59.746 55.000 17.22 17.22 33.87 4.75
4479 4605 1.340405 CCAGATACACAAGGCTGCCTT 60.340 52.381 27.70 27.70 45.88 4.35
4480 4606 2.092968 CCAGATACACAAGGCTGCCTTA 60.093 50.000 31.86 18.10 42.67 2.69
4481 4607 3.201290 CAGATACACAAGGCTGCCTTAG 58.799 50.000 31.86 27.09 42.67 2.18
4494 4620 4.142609 CTGCCTTAGCTTTGGACTATCA 57.857 45.455 8.63 0.00 40.80 2.15
4495 4621 4.517285 CTGCCTTAGCTTTGGACTATCAA 58.483 43.478 8.63 0.00 40.80 2.57
4496 4622 4.261801 TGCCTTAGCTTTGGACTATCAAC 58.738 43.478 8.63 0.00 40.80 3.18
4497 4623 4.261801 GCCTTAGCTTTGGACTATCAACA 58.738 43.478 8.63 0.00 35.50 3.33
4498 4624 4.700213 GCCTTAGCTTTGGACTATCAACAA 59.300 41.667 8.63 0.00 35.50 2.83
4499 4625 5.183140 GCCTTAGCTTTGGACTATCAACAAA 59.817 40.000 8.63 0.00 35.50 2.83
4500 4626 6.294508 GCCTTAGCTTTGGACTATCAACAAAA 60.295 38.462 8.63 0.00 34.13 2.44
4501 4627 7.308435 CCTTAGCTTTGGACTATCAACAAAAG 58.692 38.462 0.00 0.00 34.13 2.27
4502 4628 7.040409 CCTTAGCTTTGGACTATCAACAAAAGT 60.040 37.037 0.00 0.00 34.13 2.66
4503 4629 6.715347 AGCTTTGGACTATCAACAAAAGTT 57.285 33.333 0.00 0.00 34.13 2.66
4504 4630 7.112452 AGCTTTGGACTATCAACAAAAGTTT 57.888 32.000 0.00 0.00 34.13 2.66
4505 4631 7.203218 AGCTTTGGACTATCAACAAAAGTTTC 58.797 34.615 0.00 0.00 34.13 2.78
4506 4632 7.068716 AGCTTTGGACTATCAACAAAAGTTTCT 59.931 33.333 0.00 0.00 34.13 2.52
4507 4633 8.349983 GCTTTGGACTATCAACAAAAGTTTCTA 58.650 33.333 0.00 0.00 34.13 2.10
4508 4634 9.884465 CTTTGGACTATCAACAAAAGTTTCTAG 57.116 33.333 0.00 0.00 34.13 2.43
4509 4635 8.974060 TTGGACTATCAACAAAAGTTTCTAGT 57.026 30.769 0.00 0.00 0.00 2.57
4510 4636 8.378172 TGGACTATCAACAAAAGTTTCTAGTG 57.622 34.615 0.00 0.00 0.00 2.74
4511 4637 7.444183 TGGACTATCAACAAAAGTTTCTAGTGG 59.556 37.037 0.00 0.00 0.00 4.00
4512 4638 7.203255 ACTATCAACAAAAGTTTCTAGTGGC 57.797 36.000 0.00 0.00 0.00 5.01
4513 4639 6.998673 ACTATCAACAAAAGTTTCTAGTGGCT 59.001 34.615 0.00 0.00 0.00 4.75
4514 4640 6.715347 ATCAACAAAAGTTTCTAGTGGCTT 57.285 33.333 0.00 0.00 0.00 4.35
4515 4641 6.131544 TCAACAAAAGTTTCTAGTGGCTTC 57.868 37.500 0.00 0.00 0.00 3.86
4516 4642 5.067283 TCAACAAAAGTTTCTAGTGGCTTCC 59.933 40.000 0.00 0.00 0.00 3.46
4517 4643 4.793201 ACAAAAGTTTCTAGTGGCTTCCT 58.207 39.130 0.00 0.00 0.00 3.36
4518 4644 5.201243 ACAAAAGTTTCTAGTGGCTTCCTT 58.799 37.500 0.00 0.00 0.00 3.36
4519 4645 5.067805 ACAAAAGTTTCTAGTGGCTTCCTTG 59.932 40.000 0.00 0.00 0.00 3.61
4520 4646 3.425162 AGTTTCTAGTGGCTTCCTTGG 57.575 47.619 0.00 0.00 0.00 3.61
4521 4647 2.979678 AGTTTCTAGTGGCTTCCTTGGA 59.020 45.455 0.00 0.00 0.00 3.53
4522 4648 3.589288 AGTTTCTAGTGGCTTCCTTGGAT 59.411 43.478 0.00 0.00 0.00 3.41
4523 4649 3.634397 TTCTAGTGGCTTCCTTGGATG 57.366 47.619 0.00 0.00 0.00 3.51
4524 4650 2.832838 TCTAGTGGCTTCCTTGGATGA 58.167 47.619 6.72 0.00 0.00 2.92
4525 4651 3.387962 TCTAGTGGCTTCCTTGGATGAT 58.612 45.455 6.72 0.00 0.00 2.45
4526 4652 2.725221 AGTGGCTTCCTTGGATGATC 57.275 50.000 6.72 0.00 0.00 2.92
4527 4653 1.134280 AGTGGCTTCCTTGGATGATCG 60.134 52.381 6.72 0.00 0.00 3.69
4528 4654 0.464373 TGGCTTCCTTGGATGATCGC 60.464 55.000 6.72 0.00 0.00 4.58
4529 4655 0.464373 GGCTTCCTTGGATGATCGCA 60.464 55.000 6.72 0.00 0.00 5.10
4530 4656 1.382522 GCTTCCTTGGATGATCGCAA 58.617 50.000 6.72 0.00 0.00 4.85
4531 4657 1.952296 GCTTCCTTGGATGATCGCAAT 59.048 47.619 6.72 0.00 0.00 3.56
4532 4658 2.287427 GCTTCCTTGGATGATCGCAATG 60.287 50.000 6.72 0.00 0.00 2.82
4533 4659 2.715749 TCCTTGGATGATCGCAATGT 57.284 45.000 0.00 0.00 0.00 2.71
4534 4660 2.564771 TCCTTGGATGATCGCAATGTC 58.435 47.619 0.00 0.00 0.00 3.06
4535 4661 2.093021 TCCTTGGATGATCGCAATGTCA 60.093 45.455 0.00 0.00 0.00 3.58
4536 4662 2.684374 CCTTGGATGATCGCAATGTCAA 59.316 45.455 0.00 0.00 0.00 3.18
4537 4663 3.129113 CCTTGGATGATCGCAATGTCAAA 59.871 43.478 0.00 0.00 0.00 2.69
4538 4664 4.380761 CCTTGGATGATCGCAATGTCAAAA 60.381 41.667 0.00 0.00 0.00 2.44
4539 4665 4.987408 TGGATGATCGCAATGTCAAAAT 57.013 36.364 0.00 0.00 0.00 1.82
4540 4666 6.448207 TTGGATGATCGCAATGTCAAAATA 57.552 33.333 0.00 0.00 0.00 1.40
4541 4667 5.820131 TGGATGATCGCAATGTCAAAATAC 58.180 37.500 0.00 0.00 0.00 1.89
4542 4668 5.589855 TGGATGATCGCAATGTCAAAATACT 59.410 36.000 0.00 0.00 0.00 2.12
4543 4669 6.765512 TGGATGATCGCAATGTCAAAATACTA 59.234 34.615 0.00 0.00 0.00 1.82
4544 4670 7.281999 TGGATGATCGCAATGTCAAAATACTAA 59.718 33.333 0.00 0.00 0.00 2.24
4545 4671 8.292448 GGATGATCGCAATGTCAAAATACTAAT 58.708 33.333 0.00 0.00 0.00 1.73
4546 4672 9.322776 GATGATCGCAATGTCAAAATACTAATC 57.677 33.333 0.00 0.00 0.00 1.75
4547 4673 7.639039 TGATCGCAATGTCAAAATACTAATCC 58.361 34.615 0.00 0.00 0.00 3.01
4548 4674 7.498900 TGATCGCAATGTCAAAATACTAATCCT 59.501 33.333 0.00 0.00 0.00 3.24
4549 4675 7.246674 TCGCAATGTCAAAATACTAATCCTC 57.753 36.000 0.00 0.00 0.00 3.71
4550 4676 6.821160 TCGCAATGTCAAAATACTAATCCTCA 59.179 34.615 0.00 0.00 0.00 3.86
4551 4677 7.498900 TCGCAATGTCAAAATACTAATCCTCAT 59.501 33.333 0.00 0.00 0.00 2.90
4552 4678 8.773645 CGCAATGTCAAAATACTAATCCTCATA 58.226 33.333 0.00 0.00 0.00 2.15
4553 4679 9.884465 GCAATGTCAAAATACTAATCCTCATAC 57.116 33.333 0.00 0.00 0.00 2.39
4555 4681 9.574516 AATGTCAAAATACTAATCCTCATACCC 57.425 33.333 0.00 0.00 0.00 3.69
4556 4682 7.514721 TGTCAAAATACTAATCCTCATACCCC 58.485 38.462 0.00 0.00 0.00 4.95
4557 4683 7.349859 TGTCAAAATACTAATCCTCATACCCCT 59.650 37.037 0.00 0.00 0.00 4.79
4558 4684 7.661847 GTCAAAATACTAATCCTCATACCCCTG 59.338 40.741 0.00 0.00 0.00 4.45
4559 4685 7.349859 TCAAAATACTAATCCTCATACCCCTGT 59.650 37.037 0.00 0.00 0.00 4.00
4560 4686 8.656806 CAAAATACTAATCCTCATACCCCTGTA 58.343 37.037 0.00 0.00 0.00 2.74
4561 4687 7.793948 AATACTAATCCTCATACCCCTGTAC 57.206 40.000 0.00 0.00 0.00 2.90
4562 4688 5.420215 ACTAATCCTCATACCCCTGTACT 57.580 43.478 0.00 0.00 0.00 2.73
4563 4689 6.541264 ACTAATCCTCATACCCCTGTACTA 57.459 41.667 0.00 0.00 0.00 1.82
4564 4690 7.117331 ACTAATCCTCATACCCCTGTACTAT 57.883 40.000 0.00 0.00 0.00 2.12
4565 4691 7.545546 ACTAATCCTCATACCCCTGTACTATT 58.454 38.462 0.00 0.00 0.00 1.73
4566 4692 8.685311 ACTAATCCTCATACCCCTGTACTATTA 58.315 37.037 0.00 0.00 0.00 0.98
4567 4693 9.191479 CTAATCCTCATACCCCTGTACTATTAG 57.809 40.741 0.00 0.00 0.00 1.73
4568 4694 5.900437 TCCTCATACCCCTGTACTATTAGG 58.100 45.833 0.00 0.00 0.00 2.69
4569 4695 5.377769 TCCTCATACCCCTGTACTATTAGGT 59.622 44.000 0.00 0.00 31.99 3.08
4570 4696 6.082707 CCTCATACCCCTGTACTATTAGGTT 58.917 44.000 0.00 0.00 31.99 3.50
4571 4697 6.014499 CCTCATACCCCTGTACTATTAGGTTG 60.014 46.154 0.00 0.00 31.99 3.77
4572 4698 5.306160 TCATACCCCTGTACTATTAGGTTGC 59.694 44.000 0.00 0.00 31.99 4.17
4573 4699 2.775960 ACCCCTGTACTATTAGGTTGCC 59.224 50.000 0.00 0.00 31.99 4.52
4574 4700 2.224209 CCCCTGTACTATTAGGTTGCCG 60.224 54.545 0.00 0.00 31.99 5.69
4575 4701 2.480845 CCTGTACTATTAGGTTGCCGC 58.519 52.381 0.00 0.00 0.00 6.53
4576 4702 2.480845 CTGTACTATTAGGTTGCCGCC 58.519 52.381 0.00 0.00 0.00 6.13
4577 4703 1.202440 TGTACTATTAGGTTGCCGCCG 60.202 52.381 0.00 0.00 0.00 6.46
4578 4704 0.249573 TACTATTAGGTTGCCGCCGC 60.250 55.000 0.00 0.00 0.00 6.53
4579 4705 1.522806 CTATTAGGTTGCCGCCGCA 60.523 57.895 0.00 0.00 45.49 5.69
4598 4724 5.316488 CGCAAGGATGTACTCTTAAATCG 57.684 43.478 0.00 0.00 0.00 3.34
4599 4725 4.209288 CGCAAGGATGTACTCTTAAATCGG 59.791 45.833 0.00 0.00 0.00 4.18
4600 4726 5.357257 GCAAGGATGTACTCTTAAATCGGA 58.643 41.667 0.00 0.00 0.00 4.55
4601 4727 5.992217 GCAAGGATGTACTCTTAAATCGGAT 59.008 40.000 0.00 0.00 0.00 4.18
4602 4728 6.146347 GCAAGGATGTACTCTTAAATCGGATC 59.854 42.308 0.00 0.00 0.00 3.36
4603 4729 7.437748 CAAGGATGTACTCTTAAATCGGATCT 58.562 38.462 0.00 0.00 0.00 2.75
4604 4730 7.604657 AGGATGTACTCTTAAATCGGATCTT 57.395 36.000 0.00 0.00 0.00 2.40
4605 4731 7.662897 AGGATGTACTCTTAAATCGGATCTTC 58.337 38.462 0.00 0.00 0.00 2.87
4606 4732 7.507616 AGGATGTACTCTTAAATCGGATCTTCT 59.492 37.037 0.00 0.00 0.00 2.85
4607 4733 8.145122 GGATGTACTCTTAAATCGGATCTTCTT 58.855 37.037 0.00 0.00 0.00 2.52
4608 4734 8.879342 ATGTACTCTTAAATCGGATCTTCTTG 57.121 34.615 0.00 0.00 0.00 3.02
4609 4735 7.837863 TGTACTCTTAAATCGGATCTTCTTGT 58.162 34.615 0.00 0.00 0.00 3.16
4610 4736 8.311836 TGTACTCTTAAATCGGATCTTCTTGTT 58.688 33.333 0.00 0.00 0.00 2.83
4611 4737 7.602517 ACTCTTAAATCGGATCTTCTTGTTG 57.397 36.000 0.00 0.00 0.00 3.33
4612 4738 7.386851 ACTCTTAAATCGGATCTTCTTGTTGA 58.613 34.615 0.00 0.00 0.00 3.18
4613 4739 8.043710 ACTCTTAAATCGGATCTTCTTGTTGAT 58.956 33.333 0.00 0.00 0.00 2.57
4614 4740 8.201554 TCTTAAATCGGATCTTCTTGTTGATG 57.798 34.615 0.00 0.00 0.00 3.07
4615 4741 5.824904 AAATCGGATCTTCTTGTTGATGG 57.175 39.130 0.00 0.00 0.00 3.51
4616 4742 3.981071 TCGGATCTTCTTGTTGATGGT 57.019 42.857 0.00 0.00 0.00 3.55
4617 4743 3.599343 TCGGATCTTCTTGTTGATGGTG 58.401 45.455 0.00 0.00 0.00 4.17
4618 4744 2.096496 CGGATCTTCTTGTTGATGGTGC 59.904 50.000 0.00 0.00 0.00 5.01
4619 4745 3.350833 GGATCTTCTTGTTGATGGTGCT 58.649 45.455 0.00 0.00 0.00 4.40
4620 4746 4.517285 GGATCTTCTTGTTGATGGTGCTA 58.483 43.478 0.00 0.00 0.00 3.49
4621 4747 4.943705 GGATCTTCTTGTTGATGGTGCTAA 59.056 41.667 0.00 0.00 0.00 3.09
4622 4748 5.065731 GGATCTTCTTGTTGATGGTGCTAAG 59.934 44.000 0.00 0.00 0.00 2.18
4623 4749 5.227569 TCTTCTTGTTGATGGTGCTAAGA 57.772 39.130 0.00 0.00 0.00 2.10
4624 4750 5.809001 TCTTCTTGTTGATGGTGCTAAGAT 58.191 37.500 0.00 0.00 0.00 2.40
4625 4751 5.877012 TCTTCTTGTTGATGGTGCTAAGATC 59.123 40.000 0.00 0.00 0.00 2.75
4626 4752 5.426689 TCTTGTTGATGGTGCTAAGATCT 57.573 39.130 0.00 0.00 0.00 2.75
4627 4753 6.544928 TCTTGTTGATGGTGCTAAGATCTA 57.455 37.500 0.00 0.00 0.00 1.98
4628 4754 7.129457 TCTTGTTGATGGTGCTAAGATCTAT 57.871 36.000 0.00 0.00 0.00 1.98
4629 4755 7.568349 TCTTGTTGATGGTGCTAAGATCTATT 58.432 34.615 0.00 0.00 0.00 1.73
4630 4756 7.712639 TCTTGTTGATGGTGCTAAGATCTATTC 59.287 37.037 0.00 0.00 0.00 1.75
4631 4757 7.129457 TGTTGATGGTGCTAAGATCTATTCT 57.871 36.000 0.00 0.00 35.70 2.40
4632 4758 6.988580 TGTTGATGGTGCTAAGATCTATTCTG 59.011 38.462 0.00 0.00 33.93 3.02
4633 4759 6.983906 TGATGGTGCTAAGATCTATTCTGA 57.016 37.500 0.00 0.00 33.93 3.27
4634 4760 7.550597 TGATGGTGCTAAGATCTATTCTGAT 57.449 36.000 0.00 0.00 33.93 2.90
4635 4761 7.384477 TGATGGTGCTAAGATCTATTCTGATG 58.616 38.462 0.00 0.00 33.93 3.07
4636 4762 5.545588 TGGTGCTAAGATCTATTCTGATGC 58.454 41.667 0.00 0.00 33.93 3.91
4637 4763 5.306419 TGGTGCTAAGATCTATTCTGATGCT 59.694 40.000 0.00 0.00 33.93 3.79
4638 4764 6.183361 TGGTGCTAAGATCTATTCTGATGCTT 60.183 38.462 0.00 0.00 33.93 3.91
4639 4765 6.709846 GGTGCTAAGATCTATTCTGATGCTTT 59.290 38.462 0.00 0.00 33.93 3.51
4640 4766 7.228308 GGTGCTAAGATCTATTCTGATGCTTTT 59.772 37.037 0.00 0.00 33.93 2.27
4641 4767 8.619546 GTGCTAAGATCTATTCTGATGCTTTTT 58.380 33.333 0.00 0.00 33.93 1.94
4669 4795 9.640974 TTTTTGAGAAACGATACTTCTTTTACG 57.359 29.630 0.00 0.00 33.24 3.18
4670 4796 7.935338 TTGAGAAACGATACTTCTTTTACGT 57.065 32.000 0.00 0.00 33.24 3.57
4671 4797 7.329438 TGAGAAACGATACTTCTTTTACGTG 57.671 36.000 0.00 0.00 33.24 4.49
4672 4798 6.919662 TGAGAAACGATACTTCTTTTACGTGT 59.080 34.615 0.00 0.00 33.24 4.49
4673 4799 7.436080 TGAGAAACGATACTTCTTTTACGTGTT 59.564 33.333 0.00 0.00 33.24 3.32
4674 4800 7.781277 AGAAACGATACTTCTTTTACGTGTTC 58.219 34.615 0.00 0.00 34.36 3.18
4675 4801 7.436080 AGAAACGATACTTCTTTTACGTGTTCA 59.564 33.333 0.00 0.00 34.36 3.18
4676 4802 7.467557 AACGATACTTCTTTTACGTGTTCAA 57.532 32.000 0.00 0.00 34.36 2.69
4677 4803 7.467557 ACGATACTTCTTTTACGTGTTCAAA 57.532 32.000 0.00 0.00 32.93 2.69
4678 4804 7.908230 ACGATACTTCTTTTACGTGTTCAAAA 58.092 30.769 0.00 0.00 32.93 2.44
4679 4805 8.060090 ACGATACTTCTTTTACGTGTTCAAAAG 58.940 33.333 12.90 12.90 41.18 2.27
4680 4806 8.060090 CGATACTTCTTTTACGTGTTCAAAAGT 58.940 33.333 16.75 12.53 40.82 2.66
4681 4807 9.712359 GATACTTCTTTTACGTGTTCAAAAGTT 57.288 29.630 16.75 8.54 40.82 2.66
4682 4808 9.712359 ATACTTCTTTTACGTGTTCAAAAGTTC 57.288 29.630 16.75 0.00 40.82 3.01
4683 4809 7.025365 ACTTCTTTTACGTGTTCAAAAGTTCC 58.975 34.615 16.75 0.00 40.82 3.62
4684 4810 6.497785 TCTTTTACGTGTTCAAAAGTTCCA 57.502 33.333 16.75 0.65 40.82 3.53
4685 4811 6.548171 TCTTTTACGTGTTCAAAAGTTCCAG 58.452 36.000 16.75 0.00 40.82 3.86
4686 4812 4.886247 TTACGTGTTCAAAAGTTCCAGG 57.114 40.909 0.00 0.00 0.00 4.45
4687 4813 2.718563 ACGTGTTCAAAAGTTCCAGGT 58.281 42.857 0.00 0.00 0.00 4.00
4688 4814 3.086282 ACGTGTTCAAAAGTTCCAGGTT 58.914 40.909 0.00 0.00 0.00 3.50
4689 4815 3.508402 ACGTGTTCAAAAGTTCCAGGTTT 59.492 39.130 0.00 0.00 0.00 3.27
4690 4816 4.701171 ACGTGTTCAAAAGTTCCAGGTTTA 59.299 37.500 0.00 0.00 0.00 2.01
4691 4817 5.032220 CGTGTTCAAAAGTTCCAGGTTTAC 58.968 41.667 0.00 0.00 0.00 2.01
4692 4818 5.345702 GTGTTCAAAAGTTCCAGGTTTACC 58.654 41.667 0.00 0.00 0.00 2.85
4693 4819 5.017490 TGTTCAAAAGTTCCAGGTTTACCA 58.983 37.500 1.13 0.00 38.89 3.25
4694 4820 5.480772 TGTTCAAAAGTTCCAGGTTTACCAA 59.519 36.000 1.13 0.00 38.89 3.67
4695 4821 6.014499 TGTTCAAAAGTTCCAGGTTTACCAAA 60.014 34.615 1.13 0.00 38.89 3.28
4696 4822 6.800072 TCAAAAGTTCCAGGTTTACCAAAT 57.200 33.333 1.13 0.00 38.89 2.32
4697 4823 6.578023 TCAAAAGTTCCAGGTTTACCAAATG 58.422 36.000 1.13 0.00 38.89 2.32
4698 4824 5.545063 AAAGTTCCAGGTTTACCAAATGG 57.455 39.130 1.13 0.00 38.89 3.16
4699 4825 2.897326 AGTTCCAGGTTTACCAAATGGC 59.103 45.455 0.00 0.00 39.32 4.40
4700 4826 2.630580 GTTCCAGGTTTACCAAATGGCA 59.369 45.455 0.00 0.00 39.32 4.92
4701 4827 2.524306 TCCAGGTTTACCAAATGGCAG 58.476 47.619 0.00 0.00 39.32 4.85
4702 4828 1.066929 CCAGGTTTACCAAATGGCAGC 60.067 52.381 0.00 0.00 39.32 5.25
4703 4829 0.887933 AGGTTTACCAAATGGCAGCG 59.112 50.000 0.00 0.00 39.32 5.18
4704 4830 0.601057 GGTTTACCAAATGGCAGCGT 59.399 50.000 0.00 0.00 39.32 5.07
4705 4831 1.000394 GGTTTACCAAATGGCAGCGTT 60.000 47.619 0.00 0.00 39.32 4.84
4706 4832 2.324860 GTTTACCAAATGGCAGCGTTC 58.675 47.619 0.00 0.00 39.32 3.95
4707 4833 1.904287 TTACCAAATGGCAGCGTTCT 58.096 45.000 0.00 0.00 39.32 3.01
4708 4834 1.448985 TACCAAATGGCAGCGTTCTC 58.551 50.000 0.00 0.00 39.32 2.87
4709 4835 0.537143 ACCAAATGGCAGCGTTCTCA 60.537 50.000 0.00 0.00 39.32 3.27
4710 4836 0.597568 CCAAATGGCAGCGTTCTCAA 59.402 50.000 0.00 0.00 0.00 3.02
4711 4837 1.666888 CCAAATGGCAGCGTTCTCAAC 60.667 52.381 0.00 0.00 0.00 3.18
4712 4838 1.267806 CAAATGGCAGCGTTCTCAACT 59.732 47.619 0.00 0.00 0.00 3.16
4713 4839 1.609208 AATGGCAGCGTTCTCAACTT 58.391 45.000 0.00 0.00 0.00 2.66
4714 4840 1.160137 ATGGCAGCGTTCTCAACTTC 58.840 50.000 0.00 0.00 0.00 3.01
4715 4841 0.106708 TGGCAGCGTTCTCAACTTCT 59.893 50.000 0.00 0.00 0.00 2.85
4716 4842 1.230324 GGCAGCGTTCTCAACTTCTT 58.770 50.000 0.00 0.00 0.00 2.52
4717 4843 1.069636 GGCAGCGTTCTCAACTTCTTG 60.070 52.381 0.00 0.00 0.00 3.02
4718 4844 1.661460 GCAGCGTTCTCAACTTCTTGC 60.661 52.381 0.00 0.00 0.00 4.01
4719 4845 1.599071 CAGCGTTCTCAACTTCTTGCA 59.401 47.619 0.00 0.00 0.00 4.08
4720 4846 1.869767 AGCGTTCTCAACTTCTTGCAG 59.130 47.619 0.00 0.00 0.00 4.41
4721 4847 1.069636 GCGTTCTCAACTTCTTGCAGG 60.070 52.381 0.00 0.00 0.00 4.85
4722 4848 2.483876 CGTTCTCAACTTCTTGCAGGA 58.516 47.619 0.00 0.00 0.00 3.86
4723 4849 2.221981 CGTTCTCAACTTCTTGCAGGAC 59.778 50.000 0.00 0.00 0.00 3.85
4724 4850 2.550180 GTTCTCAACTTCTTGCAGGACC 59.450 50.000 0.00 0.00 0.00 4.46
4725 4851 1.768275 TCTCAACTTCTTGCAGGACCA 59.232 47.619 0.00 0.00 0.00 4.02
4726 4852 1.876156 CTCAACTTCTTGCAGGACCAC 59.124 52.381 0.00 0.00 0.00 4.16
4727 4853 1.211703 TCAACTTCTTGCAGGACCACA 59.788 47.619 0.00 0.00 0.00 4.17
4728 4854 1.605710 CAACTTCTTGCAGGACCACAG 59.394 52.381 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 4.023021 GCTTGAGGTTATCGGGTACTCTAG 60.023 50.000 0.00 0.00 35.26 2.43
50 51 4.217767 GGTGGACTAGGGATGTTTTGAAAC 59.782 45.833 0.00 0.00 39.33 2.78
53 54 2.983192 TGGTGGACTAGGGATGTTTTGA 59.017 45.455 0.00 0.00 0.00 2.69
339 354 3.806521 CACAACTGAGAAGAACAGTGAGG 59.193 47.826 0.00 0.00 46.01 3.86
341 356 4.471904 ACACAACTGAGAAGAACAGTGA 57.528 40.909 0.00 0.00 46.01 3.41
444 459 1.301087 GCAAGCAGCAATGCCAACA 60.301 52.632 11.20 0.00 44.79 3.33
445 460 3.557824 GCAAGCAGCAATGCCAAC 58.442 55.556 11.20 0.00 44.79 3.77
646 668 0.465278 GCAATGGAGGAAGAGGAGGC 60.465 60.000 0.00 0.00 0.00 4.70
647 669 1.134159 CAGCAATGGAGGAAGAGGAGG 60.134 57.143 0.00 0.00 0.00 4.30
648 670 1.558756 ACAGCAATGGAGGAAGAGGAG 59.441 52.381 0.00 0.00 0.00 3.69
649 671 1.556911 GACAGCAATGGAGGAAGAGGA 59.443 52.381 0.00 0.00 0.00 3.71
650 672 1.280133 TGACAGCAATGGAGGAAGAGG 59.720 52.381 0.00 0.00 0.00 3.69
651 673 2.746362 GTTGACAGCAATGGAGGAAGAG 59.254 50.000 0.00 0.00 36.22 2.85
652 674 2.373169 AGTTGACAGCAATGGAGGAAGA 59.627 45.455 0.00 0.00 36.22 2.87
653 675 2.787994 AGTTGACAGCAATGGAGGAAG 58.212 47.619 0.00 0.00 36.22 3.46
654 676 2.886523 CAAGTTGACAGCAATGGAGGAA 59.113 45.455 0.00 0.00 36.22 3.36
655 677 2.507484 CAAGTTGACAGCAATGGAGGA 58.493 47.619 0.00 0.00 36.22 3.71
656 678 1.068055 GCAAGTTGACAGCAATGGAGG 60.068 52.381 7.16 0.00 36.22 4.30
657 679 1.068055 GGCAAGTTGACAGCAATGGAG 60.068 52.381 7.16 0.00 36.22 3.86
658 680 0.961019 GGCAAGTTGACAGCAATGGA 59.039 50.000 7.16 0.00 36.22 3.41
659 681 0.037975 GGGCAAGTTGACAGCAATGG 60.038 55.000 11.70 0.00 36.22 3.16
660 682 0.963962 AGGGCAAGTTGACAGCAATG 59.036 50.000 11.70 0.00 36.22 2.82
661 683 1.251251 GAGGGCAAGTTGACAGCAAT 58.749 50.000 11.70 0.00 36.22 3.56
662 684 0.823356 GGAGGGCAAGTTGACAGCAA 60.823 55.000 11.70 0.00 0.00 3.91
663 685 1.228245 GGAGGGCAAGTTGACAGCA 60.228 57.895 11.70 0.00 0.00 4.41
664 686 0.957888 GAGGAGGGCAAGTTGACAGC 60.958 60.000 11.70 0.94 0.00 4.40
665 687 0.689623 AGAGGAGGGCAAGTTGACAG 59.310 55.000 11.70 0.00 0.00 3.51
666 688 1.072331 GAAGAGGAGGGCAAGTTGACA 59.928 52.381 11.70 0.00 0.00 3.58
667 689 1.611936 GGAAGAGGAGGGCAAGTTGAC 60.612 57.143 7.16 2.70 0.00 3.18
668 690 0.693049 GGAAGAGGAGGGCAAGTTGA 59.307 55.000 7.16 0.00 0.00 3.18
669 691 0.695347 AGGAAGAGGAGGGCAAGTTG 59.305 55.000 0.00 0.00 0.00 3.16
670 692 0.988063 GAGGAAGAGGAGGGCAAGTT 59.012 55.000 0.00 0.00 0.00 2.66
671 693 0.912006 GGAGGAAGAGGAGGGCAAGT 60.912 60.000 0.00 0.00 0.00 3.16
672 694 0.911525 TGGAGGAAGAGGAGGGCAAG 60.912 60.000 0.00 0.00 0.00 4.01
673 695 0.253347 ATGGAGGAAGAGGAGGGCAA 60.253 55.000 0.00 0.00 0.00 4.52
674 696 0.253347 AATGGAGGAAGAGGAGGGCA 60.253 55.000 0.00 0.00 0.00 5.36
675 697 1.418264 GTAATGGAGGAAGAGGAGGGC 59.582 57.143 0.00 0.00 0.00 5.19
701 723 3.069318 GTCCGGAAGAGGGCGAGT 61.069 66.667 5.23 0.00 0.00 4.18
721 743 3.714871 GAGAGCTCGTGGCAGAGGC 62.715 68.421 8.37 6.71 44.79 4.70
722 744 2.493973 GAGAGCTCGTGGCAGAGG 59.506 66.667 8.37 0.00 44.79 3.69
723 745 2.101965 CGAGAGCTCGTGGCAGAG 59.898 66.667 8.37 8.90 46.99 3.35
768 790 0.665972 CACCGGGCCGATTTGTTTTG 60.666 55.000 30.79 9.73 0.00 2.44
805 828 3.427243 GGTCGAATAGAACTCGTCACAG 58.573 50.000 0.00 0.00 37.56 3.66
1191 1235 1.527370 GGGACGGAATTGGAGGGAG 59.473 63.158 0.00 0.00 0.00 4.30
1261 1305 0.250901 TCTCAAACAGGCAAGCTCCC 60.251 55.000 0.00 0.00 0.00 4.30
1264 1308 3.255149 CAGAAATCTCAAACAGGCAAGCT 59.745 43.478 0.00 0.00 0.00 3.74
1281 1325 3.673052 GCAACGGCAGCAATTATCAGAAA 60.673 43.478 0.00 0.00 40.72 2.52
1290 1334 0.321564 TCAGTAGCAACGGCAGCAAT 60.322 50.000 0.00 0.00 44.61 3.56
1328 1372 1.200020 CAAAACACCCTCGAATCAGCC 59.800 52.381 0.00 0.00 0.00 4.85
1335 1379 1.407258 CAAAAGCCAAAACACCCTCGA 59.593 47.619 0.00 0.00 0.00 4.04
1341 1385 0.657312 GCCTGCAAAAGCCAAAACAC 59.343 50.000 0.00 0.00 0.00 3.32
1342 1386 0.251354 TGCCTGCAAAAGCCAAAACA 59.749 45.000 0.00 0.00 0.00 2.83
1527 1571 6.209788 CACCCTCTATTCTGGATCCTAACTAC 59.790 46.154 14.23 0.00 0.00 2.73
1552 1599 2.353889 CCATCACAATACTGCTCTGTGC 59.646 50.000 0.00 0.00 40.22 4.57
1580 1627 1.903404 CCCTGCCAACCCACAACTC 60.903 63.158 0.00 0.00 0.00 3.01
1603 1652 7.490079 GTGATATTCAAGCAAGCAATCATCAAA 59.510 33.333 0.00 0.00 0.00 2.69
1689 1739 4.706842 ATCCGGCTTCCTACAATACAAT 57.293 40.909 0.00 0.00 0.00 2.71
1690 1740 4.196193 CAATCCGGCTTCCTACAATACAA 58.804 43.478 0.00 0.00 0.00 2.41
1826 1876 7.722949 ACAGGTAAATCAATTTCCATGTCAT 57.277 32.000 0.00 0.00 0.00 3.06
2066 2119 6.202379 TGAAATTTGGCACACATTTGTACATG 59.798 34.615 0.00 0.00 46.95 3.21
2123 2176 3.981071 ATCACGAGTTCCTTCAATGGA 57.019 42.857 0.00 0.00 0.00 3.41
2151 2204 6.015519 ACTCATGCACTTAAGCCAAAATGTTA 60.016 34.615 1.29 0.00 0.00 2.41
2217 2270 1.461127 GATTGGTCAACTCGTGCACTC 59.539 52.381 16.19 0.00 0.00 3.51
2224 2277 2.549754 AGCACAAAGATTGGTCAACTCG 59.450 45.455 0.00 0.00 34.12 4.18
2261 2328 0.108992 TCGCCACTGATGAACCGTAC 60.109 55.000 0.00 0.00 0.00 3.67
2265 2332 3.244976 CAAATTTCGCCACTGATGAACC 58.755 45.455 0.00 0.00 0.00 3.62
2278 2345 5.500825 TCGTGACATCATATGCAAATTTCG 58.499 37.500 0.00 0.00 0.00 3.46
2331 2405 6.348050 GGCATACAGAATTCAGCTAATAGCAC 60.348 42.308 15.28 0.00 45.56 4.40
2586 2685 7.594351 AAAGAGATCAGCAGATATGTGAGTA 57.406 36.000 3.61 0.00 33.72 2.59
2740 2840 8.114301 ACATTTAGACCCTGGAAATACCTAAT 57.886 34.615 0.00 0.00 39.86 1.73
2772 2872 6.206829 GGAAGTACCTATCAAAACAGCAAACT 59.793 38.462 0.00 0.00 35.41 2.66
3016 3122 6.947733 AGACAGGGTTAAACATCATGAATTCA 59.052 34.615 11.26 11.26 0.00 2.57
3058 3164 6.484977 TGTGAAATTACAAGTGCAGTGTCATA 59.515 34.615 6.24 0.00 0.00 2.15
3066 3172 7.009999 GTGTGAATTTGTGAAATTACAAGTGCA 59.990 33.333 0.00 0.00 40.97 4.57
3113 3219 7.936584 TGTTATAAGGGCAGTGCATATAAAAC 58.063 34.615 18.61 13.75 0.00 2.43
3123 3229 6.293081 CGATCTGATTTGTTATAAGGGCAGTG 60.293 42.308 0.00 0.00 0.00 3.66
3212 3321 4.155099 CGTTACAATACATGCAACCCTGAA 59.845 41.667 0.00 0.00 32.55 3.02
3265 3374 3.680937 TCAAAGGTCGGTAAATAACAGCG 59.319 43.478 0.00 0.00 38.21 5.18
3278 3387 3.081061 TCCACCAAATGATCAAAGGTCG 58.919 45.455 12.57 8.06 0.00 4.79
3285 3394 1.674519 CGACGGTCCACCAAATGATCA 60.675 52.381 0.00 0.00 35.14 2.92
3295 3404 0.527817 CCAGCTAATCGACGGTCCAC 60.528 60.000 1.91 0.00 0.00 4.02
3300 3409 1.592669 CAGGCCAGCTAATCGACGG 60.593 63.158 5.01 0.00 0.00 4.79
3346 3455 7.272037 CTTGAAAAGCTACTAAAAACCTGGA 57.728 36.000 0.00 0.00 36.98 3.86
3401 3510 1.028868 GCCGAAGCAGAGGAAAGCAT 61.029 55.000 0.00 0.00 39.53 3.79
3481 3590 4.964897 ACATCAGATTGTGATACTCTGGGA 59.035 41.667 0.00 0.00 44.73 4.37
3523 3633 7.860872 CACTCAGGTAAAACCAACAATAAGAAC 59.139 37.037 0.00 0.00 41.95 3.01
3526 3636 7.272037 ACACTCAGGTAAAACCAACAATAAG 57.728 36.000 0.00 0.00 41.95 1.73
3530 3640 5.477291 TGAAACACTCAGGTAAAACCAACAA 59.523 36.000 0.00 0.00 41.95 2.83
3544 3654 6.992123 ACACAGATAAATCACTGAAACACTCA 59.008 34.615 0.00 0.00 37.54 3.41
3558 3668 9.804758 GTGCTAGTAAGTCTAACACAGATAAAT 57.195 33.333 0.00 0.00 42.18 1.40
3566 3676 7.326547 GTCTTTCTGTGCTAGTAAGTCTAACAC 59.673 40.741 0.00 0.00 42.63 3.32
3574 3684 5.164954 GTGAGGTCTTTCTGTGCTAGTAAG 58.835 45.833 0.00 0.00 35.72 2.34
3578 3688 2.300152 TGGTGAGGTCTTTCTGTGCTAG 59.700 50.000 0.00 0.00 0.00 3.42
3861 3986 4.691216 CCTTTTCTACTAGTGTTGCCAGAC 59.309 45.833 5.39 0.00 0.00 3.51
3900 4025 2.883574 CTCGTGCGTTACAGGGAAATA 58.116 47.619 0.00 0.00 34.84 1.40
3901 4026 1.722011 CTCGTGCGTTACAGGGAAAT 58.278 50.000 0.00 0.00 34.84 2.17
3960 4085 5.060940 GCAAATGCGGACAACTTAATCTTTC 59.939 40.000 0.00 0.00 0.00 2.62
3963 4088 4.096732 GCAAATGCGGACAACTTAATCT 57.903 40.909 0.00 0.00 0.00 2.40
3991 4116 6.035975 CCCGAATTACATTTTCAGGCAATTTC 59.964 38.462 0.00 0.00 0.00 2.17
4014 4139 2.558359 CTCCCACAAAATTGACTGACCC 59.442 50.000 0.00 0.00 0.00 4.46
4028 4153 0.545309 CTTCTCCACCTCCTCCCACA 60.545 60.000 0.00 0.00 0.00 4.17
4032 4157 1.690985 CCCCTTCTCCACCTCCTCC 60.691 68.421 0.00 0.00 0.00 4.30
4056 4182 3.695606 GCCTCCGGCTCACTGACA 61.696 66.667 0.00 0.00 46.69 3.58
4114 4240 1.199615 CCTCCCAACCTCCTCTTCTC 58.800 60.000 0.00 0.00 0.00 2.87
4175 4301 3.017265 CAAAAGTGAGCCGATTTTGCT 57.983 42.857 0.00 0.00 43.03 3.91
4222 4348 1.651987 AACCATTGGATCGCTACACG 58.348 50.000 10.37 0.00 45.62 4.49
4303 4429 9.773328 CGCATAGAAAGATGATTTTCAGTTAAA 57.227 29.630 1.88 0.00 39.08 1.52
4304 4430 9.161629 TCGCATAGAAAGATGATTTTCAGTTAA 57.838 29.630 1.88 0.00 39.08 2.01
4305 4431 8.716646 TCGCATAGAAAGATGATTTTCAGTTA 57.283 30.769 1.88 0.00 39.08 2.24
4306 4432 7.615582 TCGCATAGAAAGATGATTTTCAGTT 57.384 32.000 1.88 0.00 39.08 3.16
4307 4433 7.335422 ACTTCGCATAGAAAGATGATTTTCAGT 59.665 33.333 1.88 0.00 39.08 3.41
4308 4434 7.639072 CACTTCGCATAGAAAGATGATTTTCAG 59.361 37.037 1.88 0.00 39.08 3.02
4309 4435 7.119699 ACACTTCGCATAGAAAGATGATTTTCA 59.880 33.333 1.88 0.00 39.08 2.69
4310 4436 7.467623 ACACTTCGCATAGAAAGATGATTTTC 58.532 34.615 0.00 0.00 38.57 2.29
4311 4437 7.383102 ACACTTCGCATAGAAAGATGATTTT 57.617 32.000 0.00 0.00 38.57 1.82
4312 4438 6.992063 ACACTTCGCATAGAAAGATGATTT 57.008 33.333 0.00 0.00 38.57 2.17
4313 4439 6.992063 AACACTTCGCATAGAAAGATGATT 57.008 33.333 0.00 0.00 38.57 2.57
4314 4440 9.197694 GTATAACACTTCGCATAGAAAGATGAT 57.802 33.333 0.00 0.00 38.57 2.45
4315 4441 8.414003 AGTATAACACTTCGCATAGAAAGATGA 58.586 33.333 0.00 0.00 38.57 2.92
4316 4442 8.581057 AGTATAACACTTCGCATAGAAAGATG 57.419 34.615 0.00 0.00 38.57 2.90
4317 4443 9.900710 CTAGTATAACACTTCGCATAGAAAGAT 57.099 33.333 0.00 0.00 38.57 2.40
4318 4444 7.861372 GCTAGTATAACACTTCGCATAGAAAGA 59.139 37.037 0.00 0.00 38.57 2.52
4319 4445 7.115095 GGCTAGTATAACACTTCGCATAGAAAG 59.885 40.741 0.00 0.00 38.57 2.62
4320 4446 6.921857 GGCTAGTATAACACTTCGCATAGAAA 59.078 38.462 0.00 0.00 38.57 2.52
4321 4447 6.444633 GGCTAGTATAACACTTCGCATAGAA 58.555 40.000 0.00 0.00 38.80 2.10
4322 4448 5.048224 GGGCTAGTATAACACTTCGCATAGA 60.048 44.000 0.00 0.00 38.80 1.98
4323 4449 5.047943 AGGGCTAGTATAACACTTCGCATAG 60.048 44.000 0.00 0.00 38.80 2.23
4324 4450 4.831155 AGGGCTAGTATAACACTTCGCATA 59.169 41.667 0.00 0.00 38.80 3.14
4325 4451 3.641906 AGGGCTAGTATAACACTTCGCAT 59.358 43.478 0.00 0.00 38.80 4.73
4326 4452 3.028850 AGGGCTAGTATAACACTTCGCA 58.971 45.455 0.00 0.00 38.80 5.10
4327 4453 3.381949 CAGGGCTAGTATAACACTTCGC 58.618 50.000 0.00 0.00 38.80 4.70
4328 4454 3.068307 AGCAGGGCTAGTATAACACTTCG 59.932 47.826 0.00 0.00 36.99 3.79
4329 4455 4.674281 AGCAGGGCTAGTATAACACTTC 57.326 45.455 0.00 0.00 36.99 3.01
4330 4456 6.555463 TTAAGCAGGGCTAGTATAACACTT 57.445 37.500 0.00 0.00 38.25 3.16
4331 4457 6.749036 ATTAAGCAGGGCTAGTATAACACT 57.251 37.500 0.00 0.00 38.25 3.55
4332 4458 7.549488 CCATATTAAGCAGGGCTAGTATAACAC 59.451 40.741 0.00 0.00 38.25 3.32
4333 4459 7.456585 TCCATATTAAGCAGGGCTAGTATAACA 59.543 37.037 0.00 0.00 38.25 2.41
4334 4460 7.764901 GTCCATATTAAGCAGGGCTAGTATAAC 59.235 40.741 0.00 0.00 38.25 1.89
4335 4461 7.093024 GGTCCATATTAAGCAGGGCTAGTATAA 60.093 40.741 0.00 0.00 38.25 0.98
4336 4462 6.383147 GGTCCATATTAAGCAGGGCTAGTATA 59.617 42.308 0.00 0.00 38.25 1.47
4337 4463 5.189934 GGTCCATATTAAGCAGGGCTAGTAT 59.810 44.000 0.00 0.00 38.25 2.12
4338 4464 4.530946 GGTCCATATTAAGCAGGGCTAGTA 59.469 45.833 0.00 0.00 38.25 1.82
4339 4465 3.328050 GGTCCATATTAAGCAGGGCTAGT 59.672 47.826 0.00 0.00 38.25 2.57
4340 4466 3.327757 TGGTCCATATTAAGCAGGGCTAG 59.672 47.826 0.00 0.00 38.25 3.42
4341 4467 3.072476 GTGGTCCATATTAAGCAGGGCTA 59.928 47.826 0.00 0.00 38.25 3.93
4342 4468 2.135189 TGGTCCATATTAAGCAGGGCT 58.865 47.619 0.00 0.00 42.56 5.19
4343 4469 2.230660 GTGGTCCATATTAAGCAGGGC 58.769 52.381 0.00 0.00 0.00 5.19
4344 4470 2.489073 GGGTGGTCCATATTAAGCAGGG 60.489 54.545 0.00 0.00 35.00 4.45
4345 4471 2.174639 TGGGTGGTCCATATTAAGCAGG 59.825 50.000 0.00 0.00 41.46 4.85
4346 4472 3.576078 TGGGTGGTCCATATTAAGCAG 57.424 47.619 0.00 0.00 41.46 4.24
4357 4483 4.202212 GGTATAATTGCAAATGGGTGGTCC 60.202 45.833 1.71 0.00 0.00 4.46
4358 4484 4.202212 GGGTATAATTGCAAATGGGTGGTC 60.202 45.833 1.71 0.00 0.00 4.02
4359 4485 3.709141 GGGTATAATTGCAAATGGGTGGT 59.291 43.478 1.71 0.00 0.00 4.16
4360 4486 3.708631 TGGGTATAATTGCAAATGGGTGG 59.291 43.478 1.71 0.00 0.00 4.61
4361 4487 5.350504 TTGGGTATAATTGCAAATGGGTG 57.649 39.130 1.71 0.00 0.00 4.61
4362 4488 7.870426 ATATTGGGTATAATTGCAAATGGGT 57.130 32.000 1.71 0.00 0.00 4.51
4363 4489 9.571816 AAAATATTGGGTATAATTGCAAATGGG 57.428 29.630 1.71 0.00 0.00 4.00
4378 4504 9.889128 CACCATAGAAAATTGAAAATATTGGGT 57.111 29.630 0.00 0.00 0.00 4.51
4379 4505 9.889128 ACACCATAGAAAATTGAAAATATTGGG 57.111 29.630 0.00 0.00 0.00 4.12
4391 4517 9.574516 GGACTTCCATATACACCATAGAAAATT 57.425 33.333 0.00 0.00 35.64 1.82
4392 4518 8.723365 TGGACTTCCATATACACCATAGAAAAT 58.277 33.333 0.00 0.00 42.01 1.82
4393 4519 8.096621 TGGACTTCCATATACACCATAGAAAA 57.903 34.615 0.00 0.00 42.01 2.29
4394 4520 7.567250 TCTGGACTTCCATATACACCATAGAAA 59.433 37.037 0.00 0.00 46.46 2.52
4395 4521 7.073208 TCTGGACTTCCATATACACCATAGAA 58.927 38.462 0.00 0.00 46.46 2.10
4396 4522 6.620429 TCTGGACTTCCATATACACCATAGA 58.380 40.000 0.00 0.00 46.46 1.98
4397 4523 6.918067 TCTGGACTTCCATATACACCATAG 57.082 41.667 0.00 0.00 46.46 2.23
4398 4524 6.787458 ACATCTGGACTTCCATATACACCATA 59.213 38.462 0.00 0.00 46.46 2.74
4399 4525 5.608437 ACATCTGGACTTCCATATACACCAT 59.392 40.000 0.00 0.00 46.46 3.55
4400 4526 4.968719 ACATCTGGACTTCCATATACACCA 59.031 41.667 0.00 0.00 46.46 4.17
4401 4527 5.070446 TCACATCTGGACTTCCATATACACC 59.930 44.000 0.00 0.00 46.46 4.16
4402 4528 6.161855 TCACATCTGGACTTCCATATACAC 57.838 41.667 0.00 0.00 46.46 2.90
4403 4529 7.147497 ACAATCACATCTGGACTTCCATATACA 60.147 37.037 0.00 0.00 46.46 2.29
4404 4530 7.220030 ACAATCACATCTGGACTTCCATATAC 58.780 38.462 0.00 0.00 46.46 1.47
4405 4531 7.290948 AGACAATCACATCTGGACTTCCATATA 59.709 37.037 0.00 0.00 46.46 0.86
4406 4532 6.100859 AGACAATCACATCTGGACTTCCATAT 59.899 38.462 0.00 0.00 46.46 1.78
4407 4533 5.426509 AGACAATCACATCTGGACTTCCATA 59.573 40.000 0.00 0.00 46.46 2.74
4408 4534 4.226846 AGACAATCACATCTGGACTTCCAT 59.773 41.667 0.00 0.00 46.46 3.41
4409 4535 3.584406 AGACAATCACATCTGGACTTCCA 59.416 43.478 0.00 0.00 45.30 3.53
4410 4536 4.213564 AGACAATCACATCTGGACTTCC 57.786 45.455 0.00 0.00 0.00 3.46
4411 4537 6.566197 AAAAGACAATCACATCTGGACTTC 57.434 37.500 0.00 0.00 0.00 3.01
4412 4538 6.547141 TCAAAAAGACAATCACATCTGGACTT 59.453 34.615 0.00 0.00 0.00 3.01
4413 4539 6.064060 TCAAAAAGACAATCACATCTGGACT 58.936 36.000 0.00 0.00 0.00 3.85
4414 4540 6.317789 TCAAAAAGACAATCACATCTGGAC 57.682 37.500 0.00 0.00 0.00 4.02
4415 4541 7.337689 CCTATCAAAAAGACAATCACATCTGGA 59.662 37.037 0.00 0.00 0.00 3.86
4416 4542 7.337689 TCCTATCAAAAAGACAATCACATCTGG 59.662 37.037 0.00 0.00 0.00 3.86
4417 4543 8.272545 TCCTATCAAAAAGACAATCACATCTG 57.727 34.615 0.00 0.00 0.00 2.90
4418 4544 7.555554 CCTCCTATCAAAAAGACAATCACATCT 59.444 37.037 0.00 0.00 0.00 2.90
4419 4545 7.680588 GCCTCCTATCAAAAAGACAATCACATC 60.681 40.741 0.00 0.00 0.00 3.06
4420 4546 6.096001 GCCTCCTATCAAAAAGACAATCACAT 59.904 38.462 0.00 0.00 0.00 3.21
4421 4547 5.415701 GCCTCCTATCAAAAAGACAATCACA 59.584 40.000 0.00 0.00 0.00 3.58
4422 4548 5.447818 CGCCTCCTATCAAAAAGACAATCAC 60.448 44.000 0.00 0.00 0.00 3.06
4423 4549 4.635765 CGCCTCCTATCAAAAAGACAATCA 59.364 41.667 0.00 0.00 0.00 2.57
4424 4550 4.496507 GCGCCTCCTATCAAAAAGACAATC 60.497 45.833 0.00 0.00 0.00 2.67
4425 4551 3.378427 GCGCCTCCTATCAAAAAGACAAT 59.622 43.478 0.00 0.00 0.00 2.71
4426 4552 2.747446 GCGCCTCCTATCAAAAAGACAA 59.253 45.455 0.00 0.00 0.00 3.18
4427 4553 2.356135 GCGCCTCCTATCAAAAAGACA 58.644 47.619 0.00 0.00 0.00 3.41
4428 4554 1.671328 GGCGCCTCCTATCAAAAAGAC 59.329 52.381 22.15 0.00 0.00 3.01
4429 4555 1.559682 AGGCGCCTCCTATCAAAAAGA 59.440 47.619 27.08 0.00 45.41 2.52
4430 4556 2.044123 AGGCGCCTCCTATCAAAAAG 57.956 50.000 27.08 0.00 45.41 2.27
4438 4564 2.197875 GGGAGTAGGCGCCTCCTA 59.802 66.667 36.73 14.16 46.43 2.94
4439 4565 4.075793 TGGGAGTAGGCGCCTCCT 62.076 66.667 36.73 29.74 46.43 3.69
4440 4566 3.851128 GTGGGAGTAGGCGCCTCC 61.851 72.222 36.73 28.18 46.49 4.30
4441 4567 3.075005 TGTGGGAGTAGGCGCCTC 61.075 66.667 36.73 24.10 34.78 4.70
4442 4568 3.391382 GTGTGGGAGTAGGCGCCT 61.391 66.667 34.85 34.85 34.78 5.52
4443 4569 4.468689 GGTGTGGGAGTAGGCGCC 62.469 72.222 21.89 21.89 0.00 6.53
4444 4570 3.665675 CTGGTGTGGGAGTAGGCGC 62.666 68.421 0.00 0.00 0.00 6.53
4445 4571 1.330655 ATCTGGTGTGGGAGTAGGCG 61.331 60.000 0.00 0.00 0.00 5.52
4446 4572 1.413077 GTATCTGGTGTGGGAGTAGGC 59.587 57.143 0.00 0.00 0.00 3.93
4447 4573 2.431057 GTGTATCTGGTGTGGGAGTAGG 59.569 54.545 0.00 0.00 0.00 3.18
4448 4574 3.096852 TGTGTATCTGGTGTGGGAGTAG 58.903 50.000 0.00 0.00 0.00 2.57
4449 4575 3.178412 TGTGTATCTGGTGTGGGAGTA 57.822 47.619 0.00 0.00 0.00 2.59
4450 4576 2.024176 TGTGTATCTGGTGTGGGAGT 57.976 50.000 0.00 0.00 0.00 3.85
4451 4577 2.355108 CCTTGTGTATCTGGTGTGGGAG 60.355 54.545 0.00 0.00 0.00 4.30
4452 4578 1.628340 CCTTGTGTATCTGGTGTGGGA 59.372 52.381 0.00 0.00 0.00 4.37
4453 4579 1.950484 GCCTTGTGTATCTGGTGTGGG 60.950 57.143 0.00 0.00 0.00 4.61
4454 4580 1.003580 AGCCTTGTGTATCTGGTGTGG 59.996 52.381 0.00 0.00 0.00 4.17
4455 4581 2.079158 CAGCCTTGTGTATCTGGTGTG 58.921 52.381 0.00 0.00 0.00 3.82
4456 4582 1.611673 GCAGCCTTGTGTATCTGGTGT 60.612 52.381 0.00 0.00 0.00 4.16
4457 4583 1.089920 GCAGCCTTGTGTATCTGGTG 58.910 55.000 0.00 0.00 0.00 4.17
4458 4584 0.035056 GGCAGCCTTGTGTATCTGGT 60.035 55.000 3.29 0.00 0.00 4.00
4459 4585 0.254178 AGGCAGCCTTGTGTATCTGG 59.746 55.000 8.70 0.00 0.00 3.86
4460 4586 2.119801 AAGGCAGCCTTGTGTATCTG 57.880 50.000 26.87 0.00 42.96 2.90
4461 4587 2.420687 GCTAAGGCAGCCTTGTGTATCT 60.421 50.000 33.67 10.07 44.44 1.98
4462 4588 1.943340 GCTAAGGCAGCCTTGTGTATC 59.057 52.381 33.67 13.54 44.44 2.24
4463 4589 2.044123 GCTAAGGCAGCCTTGTGTAT 57.956 50.000 33.67 11.62 44.44 2.29
4464 4590 3.551259 GCTAAGGCAGCCTTGTGTA 57.449 52.632 33.67 15.03 44.44 2.90
4465 4591 4.404691 GCTAAGGCAGCCTTGTGT 57.595 55.556 33.67 12.79 44.44 3.72
4473 4599 4.142609 TGATAGTCCAAAGCTAAGGCAG 57.857 45.455 0.00 0.00 41.70 4.85
4474 4600 4.261801 GTTGATAGTCCAAAGCTAAGGCA 58.738 43.478 0.00 0.00 41.70 4.75
4475 4601 4.261801 TGTTGATAGTCCAAAGCTAAGGC 58.738 43.478 0.00 0.00 39.06 4.35
4476 4602 6.817765 TTTGTTGATAGTCCAAAGCTAAGG 57.182 37.500 0.00 0.00 0.00 2.69
4477 4603 7.875971 ACTTTTGTTGATAGTCCAAAGCTAAG 58.124 34.615 0.00 0.00 30.51 2.18
4478 4604 7.817418 ACTTTTGTTGATAGTCCAAAGCTAA 57.183 32.000 0.00 0.00 30.51 3.09
4479 4605 7.817418 AACTTTTGTTGATAGTCCAAAGCTA 57.183 32.000 0.00 0.00 41.77 3.32
4480 4606 6.715347 AACTTTTGTTGATAGTCCAAAGCT 57.285 33.333 0.00 0.00 41.77 3.74
4481 4607 7.203218 AGAAACTTTTGTTGATAGTCCAAAGC 58.797 34.615 0.00 0.00 42.67 3.51
4482 4608 9.884465 CTAGAAACTTTTGTTGATAGTCCAAAG 57.116 33.333 0.00 0.00 42.67 2.77
4483 4609 9.403583 ACTAGAAACTTTTGTTGATAGTCCAAA 57.596 29.630 0.00 0.00 42.67 3.28
4484 4610 8.836413 CACTAGAAACTTTTGTTGATAGTCCAA 58.164 33.333 0.00 0.00 42.67 3.53
4485 4611 7.444183 CCACTAGAAACTTTTGTTGATAGTCCA 59.556 37.037 0.00 0.00 42.67 4.02
4486 4612 7.573283 GCCACTAGAAACTTTTGTTGATAGTCC 60.573 40.741 0.00 0.00 42.67 3.85
4487 4613 7.173390 AGCCACTAGAAACTTTTGTTGATAGTC 59.827 37.037 0.00 0.00 42.67 2.59
4488 4614 6.998673 AGCCACTAGAAACTTTTGTTGATAGT 59.001 34.615 0.00 0.00 42.67 2.12
4489 4615 7.440523 AGCCACTAGAAACTTTTGTTGATAG 57.559 36.000 0.00 0.00 42.67 2.08
4490 4616 7.040686 GGAAGCCACTAGAAACTTTTGTTGATA 60.041 37.037 0.00 0.00 42.67 2.15
4491 4617 6.239036 GGAAGCCACTAGAAACTTTTGTTGAT 60.239 38.462 0.00 0.00 42.67 2.57
4492 4618 5.067283 GGAAGCCACTAGAAACTTTTGTTGA 59.933 40.000 0.00 0.00 42.67 3.18
4493 4619 5.067805 AGGAAGCCACTAGAAACTTTTGTTG 59.932 40.000 0.00 0.00 42.67 3.33
4494 4620 5.201243 AGGAAGCCACTAGAAACTTTTGTT 58.799 37.500 0.00 0.00 45.94 2.83
4495 4621 4.793201 AGGAAGCCACTAGAAACTTTTGT 58.207 39.130 0.00 0.00 0.00 2.83
4496 4622 5.507985 CCAAGGAAGCCACTAGAAACTTTTG 60.508 44.000 0.00 0.00 0.00 2.44
4497 4623 4.584743 CCAAGGAAGCCACTAGAAACTTTT 59.415 41.667 0.00 0.00 0.00 2.27
4498 4624 4.141251 TCCAAGGAAGCCACTAGAAACTTT 60.141 41.667 0.00 0.00 0.00 2.66
4499 4625 3.394606 TCCAAGGAAGCCACTAGAAACTT 59.605 43.478 0.00 0.00 0.00 2.66
4500 4626 2.979678 TCCAAGGAAGCCACTAGAAACT 59.020 45.455 0.00 0.00 0.00 2.66
4501 4627 3.418684 TCCAAGGAAGCCACTAGAAAC 57.581 47.619 0.00 0.00 0.00 2.78
4502 4628 3.587061 TCATCCAAGGAAGCCACTAGAAA 59.413 43.478 0.00 0.00 0.00 2.52
4503 4629 3.181329 TCATCCAAGGAAGCCACTAGAA 58.819 45.455 0.00 0.00 0.00 2.10
4504 4630 2.832838 TCATCCAAGGAAGCCACTAGA 58.167 47.619 0.00 0.00 0.00 2.43
4505 4631 3.737850 GATCATCCAAGGAAGCCACTAG 58.262 50.000 0.00 0.00 0.00 2.57
4506 4632 2.103094 CGATCATCCAAGGAAGCCACTA 59.897 50.000 0.00 0.00 0.00 2.74
4507 4633 1.134280 CGATCATCCAAGGAAGCCACT 60.134 52.381 0.00 0.00 0.00 4.00
4508 4634 1.303309 CGATCATCCAAGGAAGCCAC 58.697 55.000 0.00 0.00 0.00 5.01
4509 4635 0.464373 GCGATCATCCAAGGAAGCCA 60.464 55.000 0.00 0.00 0.00 4.75
4510 4636 0.464373 TGCGATCATCCAAGGAAGCC 60.464 55.000 0.00 0.00 0.00 4.35
4511 4637 1.382522 TTGCGATCATCCAAGGAAGC 58.617 50.000 0.00 0.00 0.00 3.86
4512 4638 2.947652 ACATTGCGATCATCCAAGGAAG 59.052 45.455 7.31 0.00 0.00 3.46
4513 4639 2.945008 GACATTGCGATCATCCAAGGAA 59.055 45.455 7.31 0.00 0.00 3.36
4514 4640 2.093021 TGACATTGCGATCATCCAAGGA 60.093 45.455 7.31 0.00 0.00 3.36
4515 4641 2.291365 TGACATTGCGATCATCCAAGG 58.709 47.619 0.00 0.00 0.00 3.61
4516 4642 4.359971 TTTGACATTGCGATCATCCAAG 57.640 40.909 0.00 0.00 0.00 3.61
4517 4643 4.780275 TTTTGACATTGCGATCATCCAA 57.220 36.364 0.00 0.00 0.00 3.53
4518 4644 4.987408 ATTTTGACATTGCGATCATCCA 57.013 36.364 0.00 0.00 0.00 3.41
4519 4645 6.064846 AGTATTTTGACATTGCGATCATCC 57.935 37.500 0.00 0.00 0.00 3.51
4520 4646 9.322776 GATTAGTATTTTGACATTGCGATCATC 57.677 33.333 0.00 0.00 0.00 2.92
4521 4647 8.292448 GGATTAGTATTTTGACATTGCGATCAT 58.708 33.333 0.00 0.00 0.00 2.45
4522 4648 7.498900 AGGATTAGTATTTTGACATTGCGATCA 59.501 33.333 0.00 0.00 0.00 2.92
4523 4649 7.865707 AGGATTAGTATTTTGACATTGCGATC 58.134 34.615 0.00 0.00 0.00 3.69
4524 4650 7.498900 TGAGGATTAGTATTTTGACATTGCGAT 59.501 33.333 0.00 0.00 0.00 4.58
4525 4651 6.821160 TGAGGATTAGTATTTTGACATTGCGA 59.179 34.615 0.00 0.00 0.00 5.10
4526 4652 7.015226 TGAGGATTAGTATTTTGACATTGCG 57.985 36.000 0.00 0.00 0.00 4.85
4527 4653 9.884465 GTATGAGGATTAGTATTTTGACATTGC 57.116 33.333 0.00 0.00 0.00 3.56
4529 4655 9.574516 GGGTATGAGGATTAGTATTTTGACATT 57.425 33.333 0.00 0.00 0.00 2.71
4530 4656 8.164070 GGGGTATGAGGATTAGTATTTTGACAT 58.836 37.037 0.00 0.00 0.00 3.06
4531 4657 7.349859 AGGGGTATGAGGATTAGTATTTTGACA 59.650 37.037 0.00 0.00 0.00 3.58
4532 4658 7.661847 CAGGGGTATGAGGATTAGTATTTTGAC 59.338 40.741 0.00 0.00 0.00 3.18
4533 4659 7.349859 ACAGGGGTATGAGGATTAGTATTTTGA 59.650 37.037 0.00 0.00 0.00 2.69
4534 4660 7.518188 ACAGGGGTATGAGGATTAGTATTTTG 58.482 38.462 0.00 0.00 0.00 2.44
4535 4661 7.707467 ACAGGGGTATGAGGATTAGTATTTT 57.293 36.000 0.00 0.00 0.00 1.82
4536 4662 8.017251 AGTACAGGGGTATGAGGATTAGTATTT 58.983 37.037 0.00 0.00 0.00 1.40
4537 4663 7.545546 AGTACAGGGGTATGAGGATTAGTATT 58.454 38.462 0.00 0.00 0.00 1.89
4538 4664 7.117331 AGTACAGGGGTATGAGGATTAGTAT 57.883 40.000 0.00 0.00 0.00 2.12
4539 4665 6.541264 AGTACAGGGGTATGAGGATTAGTA 57.459 41.667 0.00 0.00 0.00 1.82
4540 4666 5.420215 AGTACAGGGGTATGAGGATTAGT 57.580 43.478 0.00 0.00 0.00 2.24
4541 4667 9.191479 CTAATAGTACAGGGGTATGAGGATTAG 57.809 40.741 0.00 0.00 0.00 1.73
4542 4668 8.120538 CCTAATAGTACAGGGGTATGAGGATTA 58.879 40.741 0.00 0.00 0.00 1.75
4543 4669 6.960542 CCTAATAGTACAGGGGTATGAGGATT 59.039 42.308 0.00 0.00 0.00 3.01
4544 4670 6.048080 ACCTAATAGTACAGGGGTATGAGGAT 59.952 42.308 8.75 0.00 36.15 3.24
4545 4671 5.377769 ACCTAATAGTACAGGGGTATGAGGA 59.622 44.000 8.75 0.00 36.15 3.71
4546 4672 5.652324 ACCTAATAGTACAGGGGTATGAGG 58.348 45.833 0.00 0.00 36.15 3.86
4547 4673 6.518537 GCAACCTAATAGTACAGGGGTATGAG 60.519 46.154 0.00 0.00 36.15 2.90
4548 4674 5.306160 GCAACCTAATAGTACAGGGGTATGA 59.694 44.000 0.00 0.00 36.15 2.15
4549 4675 5.512576 GGCAACCTAATAGTACAGGGGTATG 60.513 48.000 0.00 0.00 36.15 2.39
4550 4676 4.596212 GGCAACCTAATAGTACAGGGGTAT 59.404 45.833 0.00 0.00 36.15 2.73
4551 4677 3.969312 GGCAACCTAATAGTACAGGGGTA 59.031 47.826 0.00 0.00 36.15 3.69
4552 4678 2.775960 GGCAACCTAATAGTACAGGGGT 59.224 50.000 0.00 0.00 36.15 4.95
4553 4679 2.224209 CGGCAACCTAATAGTACAGGGG 60.224 54.545 0.00 0.00 36.15 4.79
4554 4680 2.805657 GCGGCAACCTAATAGTACAGGG 60.806 54.545 0.00 0.00 36.15 4.45
4555 4681 2.480845 GCGGCAACCTAATAGTACAGG 58.519 52.381 0.00 0.00 37.97 4.00
4556 4682 2.480845 GGCGGCAACCTAATAGTACAG 58.519 52.381 3.07 0.00 0.00 2.74
4557 4683 1.202440 CGGCGGCAACCTAATAGTACA 60.202 52.381 10.53 0.00 0.00 2.90
4558 4684 1.494824 CGGCGGCAACCTAATAGTAC 58.505 55.000 10.53 0.00 0.00 2.73
4559 4685 0.249573 GCGGCGGCAACCTAATAGTA 60.250 55.000 9.78 0.00 39.62 1.82
4560 4686 1.523032 GCGGCGGCAACCTAATAGT 60.523 57.895 9.78 0.00 39.62 2.12
4561 4687 3.330275 GCGGCGGCAACCTAATAG 58.670 61.111 9.78 0.00 39.62 1.73
4571 4697 3.573491 GTACATCCTTGCGGCGGC 61.573 66.667 9.78 9.68 40.52 6.53
4572 4698 1.883084 GAGTACATCCTTGCGGCGG 60.883 63.158 9.78 0.00 0.00 6.13
4573 4699 0.460284 AAGAGTACATCCTTGCGGCG 60.460 55.000 0.51 0.51 0.00 6.46
4574 4700 2.596904 TAAGAGTACATCCTTGCGGC 57.403 50.000 0.00 0.00 0.00 6.53
4575 4701 4.209288 CGATTTAAGAGTACATCCTTGCGG 59.791 45.833 0.00 0.00 0.00 5.69
4576 4702 4.209288 CCGATTTAAGAGTACATCCTTGCG 59.791 45.833 0.00 0.00 0.00 4.85
4577 4703 5.357257 TCCGATTTAAGAGTACATCCTTGC 58.643 41.667 0.00 0.00 0.00 4.01
4578 4704 7.437748 AGATCCGATTTAAGAGTACATCCTTG 58.562 38.462 0.00 0.00 0.00 3.61
4579 4705 7.604657 AGATCCGATTTAAGAGTACATCCTT 57.395 36.000 0.00 0.00 0.00 3.36
4580 4706 7.507616 AGAAGATCCGATTTAAGAGTACATCCT 59.492 37.037 0.00 0.00 0.00 3.24
4581 4707 7.662897 AGAAGATCCGATTTAAGAGTACATCC 58.337 38.462 0.00 0.00 0.00 3.51
4582 4708 8.973378 CAAGAAGATCCGATTTAAGAGTACATC 58.027 37.037 0.00 0.00 0.00 3.06
4583 4709 8.478877 ACAAGAAGATCCGATTTAAGAGTACAT 58.521 33.333 0.00 0.00 0.00 2.29
4584 4710 7.837863 ACAAGAAGATCCGATTTAAGAGTACA 58.162 34.615 0.00 0.00 0.00 2.90
4585 4711 8.596380 CAACAAGAAGATCCGATTTAAGAGTAC 58.404 37.037 0.00 0.00 0.00 2.73
4586 4712 8.528643 TCAACAAGAAGATCCGATTTAAGAGTA 58.471 33.333 0.00 0.00 0.00 2.59
4587 4713 7.386851 TCAACAAGAAGATCCGATTTAAGAGT 58.613 34.615 0.00 0.00 0.00 3.24
4588 4714 7.834068 TCAACAAGAAGATCCGATTTAAGAG 57.166 36.000 0.00 0.00 0.00 2.85
4589 4715 7.280876 CCATCAACAAGAAGATCCGATTTAAGA 59.719 37.037 0.00 0.00 0.00 2.10
4590 4716 7.066284 ACCATCAACAAGAAGATCCGATTTAAG 59.934 37.037 0.00 0.00 0.00 1.85
4591 4717 6.884295 ACCATCAACAAGAAGATCCGATTTAA 59.116 34.615 0.00 0.00 0.00 1.52
4592 4718 6.316140 CACCATCAACAAGAAGATCCGATTTA 59.684 38.462 0.00 0.00 0.00 1.40
4593 4719 5.124457 CACCATCAACAAGAAGATCCGATTT 59.876 40.000 0.00 0.00 0.00 2.17
4594 4720 4.637534 CACCATCAACAAGAAGATCCGATT 59.362 41.667 0.00 0.00 0.00 3.34
4595 4721 4.194640 CACCATCAACAAGAAGATCCGAT 58.805 43.478 0.00 0.00 0.00 4.18
4596 4722 3.599343 CACCATCAACAAGAAGATCCGA 58.401 45.455 0.00 0.00 0.00 4.55
4597 4723 2.096496 GCACCATCAACAAGAAGATCCG 59.904 50.000 0.00 0.00 0.00 4.18
4598 4724 3.350833 AGCACCATCAACAAGAAGATCC 58.649 45.455 0.00 0.00 0.00 3.36
4599 4725 5.877012 TCTTAGCACCATCAACAAGAAGATC 59.123 40.000 0.00 0.00 0.00 2.75
4600 4726 5.809001 TCTTAGCACCATCAACAAGAAGAT 58.191 37.500 0.00 0.00 0.00 2.40
4601 4727 5.227569 TCTTAGCACCATCAACAAGAAGA 57.772 39.130 0.00 0.00 0.00 2.87
4602 4728 5.879223 AGATCTTAGCACCATCAACAAGAAG 59.121 40.000 0.00 0.00 0.00 2.85
4603 4729 5.809001 AGATCTTAGCACCATCAACAAGAA 58.191 37.500 0.00 0.00 0.00 2.52
4604 4730 5.426689 AGATCTTAGCACCATCAACAAGA 57.573 39.130 0.00 0.00 0.00 3.02
4605 4731 7.714377 AGAATAGATCTTAGCACCATCAACAAG 59.286 37.037 0.00 0.00 33.39 3.16
4606 4732 7.496920 CAGAATAGATCTTAGCACCATCAACAA 59.503 37.037 0.00 0.00 35.73 2.83
4607 4733 6.988580 CAGAATAGATCTTAGCACCATCAACA 59.011 38.462 0.00 0.00 35.73 3.33
4608 4734 7.212976 TCAGAATAGATCTTAGCACCATCAAC 58.787 38.462 0.00 0.00 35.73 3.18
4609 4735 7.365497 TCAGAATAGATCTTAGCACCATCAA 57.635 36.000 0.00 0.00 35.73 2.57
4610 4736 6.983906 TCAGAATAGATCTTAGCACCATCA 57.016 37.500 0.00 0.00 35.73 3.07
4611 4737 6.313411 GCATCAGAATAGATCTTAGCACCATC 59.687 42.308 0.00 0.00 35.73 3.51
4612 4738 6.013553 AGCATCAGAATAGATCTTAGCACCAT 60.014 38.462 0.00 0.00 35.73 3.55
4613 4739 5.306419 AGCATCAGAATAGATCTTAGCACCA 59.694 40.000 0.00 0.00 35.73 4.17
4614 4740 5.792741 AGCATCAGAATAGATCTTAGCACC 58.207 41.667 0.00 0.00 35.73 5.01
4615 4741 7.727331 AAAGCATCAGAATAGATCTTAGCAC 57.273 36.000 0.00 0.00 35.73 4.40
4616 4742 8.743085 AAAAAGCATCAGAATAGATCTTAGCA 57.257 30.769 0.00 0.00 35.73 3.49
4643 4769 9.640974 CGTAAAAGAAGTATCGTTTCTCAAAAA 57.359 29.630 0.00 0.00 38.11 1.94
4644 4770 8.819974 ACGTAAAAGAAGTATCGTTTCTCAAAA 58.180 29.630 0.00 0.00 38.11 2.44
4645 4771 8.270799 CACGTAAAAGAAGTATCGTTTCTCAAA 58.729 33.333 0.00 0.00 38.11 2.69
4646 4772 7.436080 ACACGTAAAAGAAGTATCGTTTCTCAA 59.564 33.333 0.00 0.00 38.11 3.02
4647 4773 6.919662 ACACGTAAAAGAAGTATCGTTTCTCA 59.080 34.615 0.00 0.00 38.11 3.27
4648 4774 7.330720 ACACGTAAAAGAAGTATCGTTTCTC 57.669 36.000 0.00 0.00 38.11 2.87
4649 4775 7.436080 TGAACACGTAAAAGAAGTATCGTTTCT 59.564 33.333 0.00 0.00 38.11 2.52
4650 4776 7.558137 TGAACACGTAAAAGAAGTATCGTTTC 58.442 34.615 0.00 0.00 38.11 2.78
4651 4777 7.467557 TGAACACGTAAAAGAAGTATCGTTT 57.532 32.000 0.00 0.00 39.90 3.60
4652 4778 7.467557 TTGAACACGTAAAAGAAGTATCGTT 57.532 32.000 0.00 0.00 0.00 3.85
4653 4779 7.467557 TTTGAACACGTAAAAGAAGTATCGT 57.532 32.000 0.00 0.00 0.00 3.73
4654 4780 8.060090 ACTTTTGAACACGTAAAAGAAGTATCG 58.940 33.333 21.98 1.49 43.25 2.92
4655 4781 9.712359 AACTTTTGAACACGTAAAAGAAGTATC 57.288 29.630 21.98 3.07 43.25 2.24
4656 4782 9.712359 GAACTTTTGAACACGTAAAAGAAGTAT 57.288 29.630 21.98 7.62 43.25 2.12
4657 4783 8.177013 GGAACTTTTGAACACGTAAAAGAAGTA 58.823 33.333 21.98 0.00 43.25 2.24
4658 4784 7.025365 GGAACTTTTGAACACGTAAAAGAAGT 58.975 34.615 21.98 10.92 43.25 3.01
4659 4785 7.024768 TGGAACTTTTGAACACGTAAAAGAAG 58.975 34.615 21.98 10.40 43.25 2.85
4660 4786 6.910995 TGGAACTTTTGAACACGTAAAAGAA 58.089 32.000 21.98 7.18 43.25 2.52
4661 4787 6.403855 CCTGGAACTTTTGAACACGTAAAAGA 60.404 38.462 21.98 4.88 43.25 2.52
4662 4788 5.741982 CCTGGAACTTTTGAACACGTAAAAG 59.258 40.000 16.14 16.14 45.03 2.27
4663 4789 5.183522 ACCTGGAACTTTTGAACACGTAAAA 59.816 36.000 0.00 0.00 0.00 1.52
4664 4790 4.701171 ACCTGGAACTTTTGAACACGTAAA 59.299 37.500 0.00 0.00 0.00 2.01
4665 4791 4.263435 ACCTGGAACTTTTGAACACGTAA 58.737 39.130 0.00 0.00 0.00 3.18
4666 4792 3.876341 ACCTGGAACTTTTGAACACGTA 58.124 40.909 0.00 0.00 0.00 3.57
4667 4793 2.718563 ACCTGGAACTTTTGAACACGT 58.281 42.857 0.00 0.00 0.00 4.49
4668 4794 3.775661 AACCTGGAACTTTTGAACACG 57.224 42.857 0.00 0.00 0.00 4.49
4669 4795 5.105675 TGGTAAACCTGGAACTTTTGAACAC 60.106 40.000 0.00 0.00 36.82 3.32
4670 4796 5.017490 TGGTAAACCTGGAACTTTTGAACA 58.983 37.500 0.00 0.00 36.82 3.18
4671 4797 5.585820 TGGTAAACCTGGAACTTTTGAAC 57.414 39.130 0.00 0.00 36.82 3.18
4672 4798 6.607004 TTTGGTAAACCTGGAACTTTTGAA 57.393 33.333 0.00 0.00 36.82 2.69
4673 4799 6.407525 CCATTTGGTAAACCTGGAACTTTTGA 60.408 38.462 0.00 0.00 32.28 2.69
4674 4800 5.757808 CCATTTGGTAAACCTGGAACTTTTG 59.242 40.000 0.00 0.00 32.28 2.44
4675 4801 5.686387 GCCATTTGGTAAACCTGGAACTTTT 60.686 40.000 0.00 0.00 37.57 2.27
4676 4802 4.202315 GCCATTTGGTAAACCTGGAACTTT 60.202 41.667 0.00 0.00 37.57 2.66
4677 4803 3.323691 GCCATTTGGTAAACCTGGAACTT 59.676 43.478 0.00 0.00 37.57 2.66
4678 4804 2.897326 GCCATTTGGTAAACCTGGAACT 59.103 45.455 0.00 0.00 37.57 3.01
4679 4805 2.630580 TGCCATTTGGTAAACCTGGAAC 59.369 45.455 0.00 0.00 37.57 3.62
4680 4806 2.896685 CTGCCATTTGGTAAACCTGGAA 59.103 45.455 0.00 0.00 37.57 3.53
4681 4807 2.524306 CTGCCATTTGGTAAACCTGGA 58.476 47.619 0.00 0.00 37.57 3.86
4682 4808 1.066929 GCTGCCATTTGGTAAACCTGG 60.067 52.381 0.02 1.31 37.57 4.45
4683 4809 1.402720 CGCTGCCATTTGGTAAACCTG 60.403 52.381 0.02 0.00 37.57 4.00
4684 4810 0.887933 CGCTGCCATTTGGTAAACCT 59.112 50.000 0.02 0.00 37.57 3.50
4685 4811 0.601057 ACGCTGCCATTTGGTAAACC 59.399 50.000 0.00 0.00 37.57 3.27
4686 4812 2.030274 AGAACGCTGCCATTTGGTAAAC 60.030 45.455 0.00 0.00 37.57 2.01
4687 4813 2.227865 GAGAACGCTGCCATTTGGTAAA 59.772 45.455 0.00 0.00 37.57 2.01
4688 4814 1.810151 GAGAACGCTGCCATTTGGTAA 59.190 47.619 0.00 0.00 37.57 2.85
4689 4815 1.271108 TGAGAACGCTGCCATTTGGTA 60.271 47.619 0.00 0.00 37.57 3.25
4690 4816 0.537143 TGAGAACGCTGCCATTTGGT 60.537 50.000 0.00 0.00 37.57 3.67
4691 4817 0.597568 TTGAGAACGCTGCCATTTGG 59.402 50.000 0.00 0.00 38.53 3.28
4692 4818 1.267806 AGTTGAGAACGCTGCCATTTG 59.732 47.619 0.00 0.00 36.23 2.32
4693 4819 1.609208 AGTTGAGAACGCTGCCATTT 58.391 45.000 0.00 0.00 36.23 2.32
4694 4820 1.537202 GAAGTTGAGAACGCTGCCATT 59.463 47.619 0.00 0.00 36.23 3.16
4695 4821 1.160137 GAAGTTGAGAACGCTGCCAT 58.840 50.000 0.00 0.00 36.23 4.40
4696 4822 0.106708 AGAAGTTGAGAACGCTGCCA 59.893 50.000 0.00 0.00 36.23 4.92
4697 4823 1.069636 CAAGAAGTTGAGAACGCTGCC 60.070 52.381 0.00 0.00 35.46 4.85
4698 4824 1.661460 GCAAGAAGTTGAGAACGCTGC 60.661 52.381 0.00 0.00 35.46 5.25
4699 4825 1.599071 TGCAAGAAGTTGAGAACGCTG 59.401 47.619 0.00 0.00 35.46 5.18
4700 4826 1.869767 CTGCAAGAAGTTGAGAACGCT 59.130 47.619 0.00 0.00 35.46 5.07
4701 4827 1.069636 CCTGCAAGAAGTTGAGAACGC 60.070 52.381 0.00 0.00 35.46 4.84
4702 4828 2.221981 GTCCTGCAAGAAGTTGAGAACG 59.778 50.000 0.00 0.00 35.46 3.95
4703 4829 2.550180 GGTCCTGCAAGAAGTTGAGAAC 59.450 50.000 0.00 0.00 35.46 3.01
4704 4830 2.172505 TGGTCCTGCAAGAAGTTGAGAA 59.827 45.455 0.00 0.00 35.46 2.87
4705 4831 1.768275 TGGTCCTGCAAGAAGTTGAGA 59.232 47.619 0.00 0.00 35.46 3.27
4706 4832 1.876156 GTGGTCCTGCAAGAAGTTGAG 59.124 52.381 0.00 0.00 35.46 3.02
4707 4833 1.211703 TGTGGTCCTGCAAGAAGTTGA 59.788 47.619 0.00 0.00 35.46 3.18
4708 4834 1.605710 CTGTGGTCCTGCAAGAAGTTG 59.394 52.381 0.00 0.00 34.07 3.16
4709 4835 1.972872 CTGTGGTCCTGCAAGAAGTT 58.027 50.000 0.00 0.00 34.07 2.66
4710 4836 3.713902 CTGTGGTCCTGCAAGAAGT 57.286 52.632 0.00 0.00 34.07 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.