Multiple sequence alignment - TraesCS5A01G271500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G271500 chr5A 100.000 4060 0 0 1412 5471 481903851 481899792 0.000000e+00 7498.0
1 TraesCS5A01G271500 chr5A 100.000 1169 0 0 1 1169 481905262 481904094 0.000000e+00 2159.0
2 TraesCS5A01G271500 chr5B 91.736 2396 132 35 2737 5084 457133300 457130923 0.000000e+00 3267.0
3 TraesCS5A01G271500 chr5B 91.040 1317 67 14 1420 2735 457134805 457133539 0.000000e+00 1731.0
4 TraesCS5A01G271500 chr5B 88.235 476 44 7 129 599 457136021 457135553 4.790000e-155 558.0
5 TraesCS5A01G271500 chr5B 85.488 379 27 5 704 1068 457135451 457135087 2.410000e-98 370.0
6 TraesCS5A01G271500 chr5B 80.924 498 50 17 2942 3396 334873678 334873183 8.720000e-93 351.0
7 TraesCS5A01G271500 chr5B 76.543 486 61 25 2939 3395 294131697 294131236 3.320000e-52 217.0
8 TraesCS5A01G271500 chr5B 87.640 178 9 9 5303 5471 457130832 457130659 1.550000e-45 195.0
9 TraesCS5A01G271500 chr5B 83.908 87 14 0 1662 1748 535700235 535700321 3.510000e-12 84.2
10 TraesCS5A01G271500 chr5B 75.714 140 31 2 1613 1749 423366077 423365938 3.540000e-07 67.6
11 TraesCS5A01G271500 chr5D 95.371 1469 58 6 3133 4597 381034196 381032734 0.000000e+00 2327.0
12 TraesCS5A01G271500 chr5D 92.230 1480 61 27 1412 2888 381036752 381035324 0.000000e+00 2047.0
13 TraesCS5A01G271500 chr5D 92.178 473 23 4 704 1169 381037206 381036741 0.000000e+00 656.0
14 TraesCS5A01G271500 chr5D 84.164 562 50 24 4557 5086 381032741 381032187 4.890000e-140 508.0
15 TraesCS5A01G271500 chr5D 84.400 500 52 10 81 571 381037853 381037371 8.300000e-128 468.0
16 TraesCS5A01G271500 chr5D 79.604 505 51 24 2939 3395 293372794 293372294 1.140000e-81 315.0
17 TraesCS5A01G271500 chr5D 90.123 243 14 5 2908 3141 381035331 381035090 1.910000e-79 307.0
18 TraesCS5A01G271500 chr3A 82.688 491 51 7 2939 3395 600924251 600923761 6.600000e-109 405.0
19 TraesCS5A01G271500 chr6D 81.414 495 55 14 2935 3393 354904895 354905388 2.410000e-98 370.0
20 TraesCS5A01G271500 chr6B 80.754 504 53 17 2935 3395 523191486 523190984 2.420000e-93 353.0
21 TraesCS5A01G271500 chr7B 81.778 450 47 11 2981 3395 516793665 516793216 1.460000e-90 344.0
22 TraesCS5A01G271500 chr2D 81.395 430 50 12 2994 3394 634834771 634834343 1.900000e-84 324.0
23 TraesCS5A01G271500 chr2D 77.103 214 35 12 1543 1746 568801828 568802037 1.610000e-20 111.0
24 TraesCS5A01G271500 chr1A 80.694 461 49 13 2970 3395 517102917 517103372 6.840000e-84 322.0
25 TraesCS5A01G271500 chr3B 87.248 298 15 7 3034 3309 661342993 661342697 8.840000e-83 318.0
26 TraesCS5A01G271500 chr3B 82.051 195 17 5 2936 3115 149469503 149469694 3.410000e-32 150.0
27 TraesCS5A01G271500 chr1B 86.282 277 38 0 3119 3395 264852982 264852706 8.910000e-78 302.0
28 TraesCS5A01G271500 chr1B 79.279 222 35 10 1534 1748 344002105 344002322 1.590000e-30 145.0
29 TraesCS5A01G271500 chr4A 81.407 398 34 12 3029 3400 383538196 383538579 6.930000e-74 289.0
30 TraesCS5A01G271500 chr4B 81.544 298 34 7 3119 3395 232111564 232111267 5.510000e-55 226.0
31 TraesCS5A01G271500 chr2A 80.368 326 36 10 2939 3243 16861761 16861443 7.130000e-54 222.0
32 TraesCS5A01G271500 chr2A 75.258 388 36 21 3032 3395 744788265 744788616 4.450000e-26 130.0
33 TraesCS5A01G271500 chr2A 76.444 225 39 13 1532 1746 708059154 708059374 5.790000e-20 110.0
34 TraesCS5A01G271500 chr1D 78.302 212 37 8 1543 1748 270231144 270231352 1.600000e-25 128.0
35 TraesCS5A01G271500 chr2B 76.233 223 43 8 1532 1746 681409288 681409508 5.790000e-20 110.0
36 TraesCS5A01G271500 chr2B 77.698 139 27 4 1612 1748 794866992 794866856 1.260000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G271500 chr5A 481899792 481905262 5470 True 4828.500000 7498 100.000000 1 5471 2 chr5A.!!$R1 5470
1 TraesCS5A01G271500 chr5B 457130659 457136021 5362 True 1224.200000 3267 88.827800 129 5471 5 chr5B.!!$R4 5342
2 TraesCS5A01G271500 chr5D 381032187 381037853 5666 True 1052.166667 2327 89.744333 81 5086 6 chr5D.!!$R2 5005
3 TraesCS5A01G271500 chr5D 293372294 293372794 500 True 315.000000 315 79.604000 2939 3395 1 chr5D.!!$R1 456
4 TraesCS5A01G271500 chr6B 523190984 523191486 502 True 353.000000 353 80.754000 2935 3395 1 chr6B.!!$R1 460

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
292 308 0.030908 AAAGAGGCGGTCGATCGATC 59.969 55.0 24.71 20.46 0.00 3.69 F
1977 2141 0.036952 ACAGTGGTCGAGCAGATTGG 60.037 55.0 19.24 8.31 0.00 3.16 F
1983 2147 0.179000 GTCGAGCAGATTGGGGATGT 59.821 55.0 0.00 0.00 0.00 3.06 F
2281 2445 0.464735 GCCGTGGTATGGTAATGGCA 60.465 55.0 0.00 0.00 44.03 4.92 F
3646 5011 0.803768 GTGCGATGCGATCTGTGTCT 60.804 55.0 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1993 2157 0.179045 CATCCCCAATCTGGTCGTCC 60.179 60.000 0.00 0.0 35.17 4.79 R
3646 5011 0.322098 CGTCATAACTGGCCAACCCA 60.322 55.000 7.01 0.0 42.79 4.51 R
3667 5032 1.129917 ACTCCTCATCAGCATCCTGG 58.870 55.000 0.00 0.0 39.61 4.45 R
4215 5586 2.895372 GGATTGGCAGGTACCGCG 60.895 66.667 18.24 0.0 0.00 6.46 R
5221 6666 0.178909 TGGGTGCAATTCCAATGGGT 60.179 50.000 0.00 0.0 34.93 4.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.708726 GCAAATGTTATGCCTCTGTTCT 57.291 40.909 0.00 0.00 37.85 3.01
32 33 4.418392 GCAAATGTTATGCCTCTGTTCTG 58.582 43.478 0.00 0.00 37.85 3.02
33 34 4.156556 GCAAATGTTATGCCTCTGTTCTGA 59.843 41.667 0.00 0.00 37.85 3.27
34 35 5.335897 GCAAATGTTATGCCTCTGTTCTGAA 60.336 40.000 0.00 0.00 37.85 3.02
35 36 6.680810 CAAATGTTATGCCTCTGTTCTGAAA 58.319 36.000 0.00 0.00 0.00 2.69
36 37 6.899393 AATGTTATGCCTCTGTTCTGAAAA 57.101 33.333 0.00 0.00 0.00 2.29
37 38 6.899393 ATGTTATGCCTCTGTTCTGAAAAA 57.101 33.333 0.00 0.00 0.00 1.94
66 67 7.420184 GGAAACCAAAATTACAAAGATGGTG 57.580 36.000 0.00 0.00 40.13 4.17
67 68 6.989759 GGAAACCAAAATTACAAAGATGGTGT 59.010 34.615 0.00 0.00 40.13 4.16
68 69 7.497579 GGAAACCAAAATTACAAAGATGGTGTT 59.502 33.333 0.00 0.00 40.13 3.32
69 70 7.784633 AACCAAAATTACAAAGATGGTGTTG 57.215 32.000 0.00 0.00 40.13 3.33
70 71 5.757808 ACCAAAATTACAAAGATGGTGTTGC 59.242 36.000 0.00 0.00 39.57 4.17
71 72 5.179182 CCAAAATTACAAAGATGGTGTTGCC 59.821 40.000 0.00 0.00 37.90 4.52
88 89 1.147557 GCCAACACACAAGCACTTGC 61.148 55.000 10.26 0.00 44.03 4.01
99 100 0.694771 AGCACTTGCCCTCTCAATCA 59.305 50.000 0.00 0.00 43.38 2.57
100 101 1.284198 AGCACTTGCCCTCTCAATCAT 59.716 47.619 0.00 0.00 43.38 2.45
110 111 4.754114 GCCCTCTCAATCATCTACATCAAC 59.246 45.833 0.00 0.00 0.00 3.18
151 159 3.408634 TCGGTCACCAATTTCTTCTTCC 58.591 45.455 0.00 0.00 0.00 3.46
156 164 3.140144 TCACCAATTTCTTCTTCCCACCT 59.860 43.478 0.00 0.00 0.00 4.00
161 169 5.246883 CCAATTTCTTCTTCCCACCTCAAAT 59.753 40.000 0.00 0.00 0.00 2.32
171 179 2.433970 CCCACCTCAAATTTGTGTTGGT 59.566 45.455 25.71 20.80 0.00 3.67
186 194 3.490526 GTGTTGGTCATGCATTGAAACAC 59.509 43.478 20.06 20.06 43.47 3.32
189 197 1.895131 GGTCATGCATTGAAACACCCT 59.105 47.619 0.00 0.00 35.70 4.34
197 205 4.141528 TGCATTGAAACACCCTTCCATTTT 60.142 37.500 0.00 0.00 0.00 1.82
206 214 7.797121 AACACCCTTCCATTTTTATGAATCT 57.203 32.000 0.00 0.00 0.00 2.40
218 226 8.893727 CATTTTTATGAATCTACCCGGGATATC 58.106 37.037 32.02 17.52 0.00 1.63
219 227 5.847111 TTATGAATCTACCCGGGATATCG 57.153 43.478 32.02 10.21 0.00 2.92
225 233 0.675837 TACCCGGGATATCGAGAGCG 60.676 60.000 32.02 0.00 39.35 5.03
282 298 0.811281 GGGATGTGAAAAAGAGGCGG 59.189 55.000 0.00 0.00 0.00 6.13
288 304 1.393883 GTGAAAAAGAGGCGGTCGATC 59.606 52.381 0.00 0.00 0.00 3.69
289 305 0.645868 GAAAAAGAGGCGGTCGATCG 59.354 55.000 15.15 15.15 0.00 3.69
290 306 0.245539 AAAAAGAGGCGGTCGATCGA 59.754 50.000 24.71 15.15 0.00 3.59
291 307 0.460311 AAAAGAGGCGGTCGATCGAT 59.540 50.000 24.71 9.41 0.00 3.59
292 308 0.030908 AAAGAGGCGGTCGATCGATC 59.969 55.000 24.71 20.46 0.00 3.69
336 352 2.157738 GCATTCCTCTTCACACTTGCT 58.842 47.619 0.00 0.00 0.00 3.91
341 357 0.689623 CTCTTCACACTTGCTCCCCT 59.310 55.000 0.00 0.00 0.00 4.79
362 378 7.610305 TCCCCTTTATGTAAAAGAACATCACTC 59.390 37.037 0.00 0.00 40.52 3.51
365 381 8.169268 CCTTTATGTAAAAGAACATCACTCGTC 58.831 37.037 0.00 0.00 40.52 4.20
366 382 8.596271 TTTATGTAAAAGAACATCACTCGTCA 57.404 30.769 0.00 0.00 40.52 4.35
367 383 8.596271 TTATGTAAAAGAACATCACTCGTCAA 57.404 30.769 0.00 0.00 40.52 3.18
375 391 3.668447 ACATCACTCGTCAAAATGCTCT 58.332 40.909 0.00 0.00 0.00 4.09
378 394 4.732285 TCACTCGTCAAAATGCTCTTTC 57.268 40.909 0.00 0.00 0.00 2.62
397 413 0.676782 CCTAGGACCGGCCAAACAAG 60.677 60.000 15.92 6.15 40.02 3.16
404 420 0.875474 CCGGCCAAACAAGCACTTTG 60.875 55.000 2.24 0.00 42.68 2.77
428 445 2.298163 CCTCAAAAGGCAGCTTCACATT 59.702 45.455 0.00 0.00 35.37 2.71
455 472 9.369904 CCAAACACTTTATTCCTAAAATGATGG 57.630 33.333 0.00 0.00 33.20 3.51
475 492 2.158460 GGGTATTCCTATGGGCTTGCTT 60.158 50.000 0.00 0.00 0.00 3.91
498 515 4.141287 CACTAACTTGATTTGGTCACCCA 58.859 43.478 0.00 0.00 39.65 4.51
499 516 4.766891 CACTAACTTGATTTGGTCACCCAT 59.233 41.667 0.00 0.00 41.49 4.00
500 517 5.243730 CACTAACTTGATTTGGTCACCCATT 59.756 40.000 0.00 0.00 41.49 3.16
501 518 5.838521 ACTAACTTGATTTGGTCACCCATTT 59.161 36.000 0.00 0.00 41.49 2.32
502 519 7.007723 ACTAACTTGATTTGGTCACCCATTTA 58.992 34.615 0.00 0.00 41.49 1.40
512 529 4.400884 TGGTCACCCATTTATATGCAACAC 59.599 41.667 0.00 0.00 35.17 3.32
548 565 4.829064 ACGTTGCTAAAAGAGAAATGCA 57.171 36.364 0.00 0.00 33.31 3.96
576 593 5.132897 TCAAATGTTGACATGTTTAGGGC 57.867 39.130 0.00 0.00 36.56 5.19
592 646 2.700773 GGCTGGATTGTTGGGTCGC 61.701 63.158 0.00 0.00 0.00 5.19
594 648 1.244019 GCTGGATTGTTGGGTCGCTT 61.244 55.000 0.00 0.00 0.00 4.68
599 653 2.161609 GGATTGTTGGGTCGCTTAGTTG 59.838 50.000 0.00 0.00 0.00 3.16
600 654 1.600023 TTGTTGGGTCGCTTAGTTGG 58.400 50.000 0.00 0.00 0.00 3.77
603 657 2.104451 TGTTGGGTCGCTTAGTTGGTAA 59.896 45.455 0.00 0.00 0.00 2.85
604 658 2.740447 GTTGGGTCGCTTAGTTGGTAAG 59.260 50.000 0.00 0.00 41.20 2.34
629 774 6.846283 GCAGTATATTGTACGCATGTTTTCTC 59.154 38.462 0.00 0.00 0.00 2.87
654 799 0.960364 AAATTGCCTCATCCGTGCGT 60.960 50.000 0.00 0.00 0.00 5.24
687 832 3.504927 GGTGGGGCCGTTATTTCG 58.495 61.111 0.00 0.00 0.00 3.46
696 841 2.536761 CCGTTATTTCGGGCCATAGA 57.463 50.000 4.39 0.00 45.88 1.98
697 842 2.841215 CCGTTATTTCGGGCCATAGAA 58.159 47.619 4.39 4.02 45.88 2.10
698 843 3.408634 CCGTTATTTCGGGCCATAGAAT 58.591 45.455 4.39 1.42 45.88 2.40
699 844 3.188460 CCGTTATTTCGGGCCATAGAATG 59.812 47.826 4.39 0.00 45.88 2.67
700 845 3.364964 CGTTATTTCGGGCCATAGAATGC 60.365 47.826 4.39 0.00 0.00 3.56
729 874 8.586273 CATTCACATGTAATTTTCGGTGAAATC 58.414 33.333 14.94 0.00 45.08 2.17
737 882 1.651987 TTCGGTGAAATCGCCTCATC 58.348 50.000 11.00 0.00 44.11 2.92
751 896 2.028766 CTCATCCGTGCGTGATGTGC 62.029 60.000 16.46 0.00 40.38 4.57
807 952 3.764049 GTGTCGCCGCGAGTGTTC 61.764 66.667 17.42 4.42 36.23 3.18
808 953 4.273257 TGTCGCCGCGAGTGTTCA 62.273 61.111 17.42 7.36 36.23 3.18
932 1077 1.079057 GACCCGGCAAACTCTCTCC 60.079 63.158 0.00 0.00 0.00 3.71
1452 1611 3.787001 CCTTCGCCACTCCCCTCC 61.787 72.222 0.00 0.00 0.00 4.30
1453 1612 3.787001 CTTCGCCACTCCCCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
1472 1636 1.838846 GCCGATCCATCTCCCTCCA 60.839 63.158 0.00 0.00 0.00 3.86
1473 1637 2.053618 CCGATCCATCTCCCTCCAC 58.946 63.158 0.00 0.00 0.00 4.02
1495 1659 2.034048 GCCCCTCCTGACCTCGATTC 62.034 65.000 0.00 0.00 0.00 2.52
1496 1660 1.736586 CCCTCCTGACCTCGATTCG 59.263 63.158 0.00 0.00 0.00 3.34
1497 1661 1.066587 CCTCCTGACCTCGATTCGC 59.933 63.158 0.00 0.00 0.00 4.70
1498 1662 1.388065 CCTCCTGACCTCGATTCGCT 61.388 60.000 0.00 0.00 0.00 4.93
1499 1663 0.248825 CTCCTGACCTCGATTCGCTG 60.249 60.000 0.00 0.00 0.00 5.18
1965 2129 3.827302 CCTACTAGAACTGTGACAGTGGT 59.173 47.826 20.19 16.62 44.62 4.16
1970 2134 0.249489 AACTGTGACAGTGGTCGAGC 60.249 55.000 20.19 7.89 44.62 5.03
1971 2135 2.903039 AACTGTGACAGTGGTCGAGCA 61.903 52.381 20.19 14.39 44.62 4.26
1972 2136 4.730187 AACTGTGACAGTGGTCGAGCAG 62.730 54.545 20.19 10.03 44.62 4.24
1975 2139 3.822607 GACAGTGGTCGAGCAGATT 57.177 52.632 19.24 4.39 33.68 2.40
1976 2140 1.354040 GACAGTGGTCGAGCAGATTG 58.646 55.000 19.24 17.98 33.68 2.67
1977 2141 0.036952 ACAGTGGTCGAGCAGATTGG 60.037 55.000 19.24 8.31 0.00 3.16
1978 2142 0.742281 CAGTGGTCGAGCAGATTGGG 60.742 60.000 19.24 0.26 0.00 4.12
1979 2143 1.450312 GTGGTCGAGCAGATTGGGG 60.450 63.158 19.24 0.00 0.00 4.96
1980 2144 1.612146 TGGTCGAGCAGATTGGGGA 60.612 57.895 14.39 0.00 0.00 4.81
1981 2145 0.982852 TGGTCGAGCAGATTGGGGAT 60.983 55.000 14.39 0.00 0.00 3.85
1982 2146 0.533755 GGTCGAGCAGATTGGGGATG 60.534 60.000 10.30 0.00 0.00 3.51
1983 2147 0.179000 GTCGAGCAGATTGGGGATGT 59.821 55.000 0.00 0.00 0.00 3.06
1984 2148 0.465705 TCGAGCAGATTGGGGATGTC 59.534 55.000 0.00 0.00 0.00 3.06
1985 2149 0.467384 CGAGCAGATTGGGGATGTCT 59.533 55.000 0.00 0.00 0.00 3.41
1986 2150 1.134280 CGAGCAGATTGGGGATGTCTT 60.134 52.381 0.00 0.00 0.00 3.01
1987 2151 2.295885 GAGCAGATTGGGGATGTCTTG 58.704 52.381 0.00 0.00 0.00 3.02
1988 2152 1.918262 AGCAGATTGGGGATGTCTTGA 59.082 47.619 0.00 0.00 0.00 3.02
1989 2153 2.019984 GCAGATTGGGGATGTCTTGAC 58.980 52.381 0.00 0.00 0.00 3.18
1990 2154 2.618816 GCAGATTGGGGATGTCTTGACA 60.619 50.000 5.89 5.89 0.00 3.58
1991 2155 3.276857 CAGATTGGGGATGTCTTGACAG 58.723 50.000 9.39 0.00 0.00 3.51
1992 2156 2.915604 AGATTGGGGATGTCTTGACAGT 59.084 45.455 9.39 0.00 0.00 3.55
1993 2157 2.566833 TTGGGGATGTCTTGACAGTG 57.433 50.000 9.39 0.00 0.00 3.66
1994 2158 0.692476 TGGGGATGTCTTGACAGTGG 59.308 55.000 9.39 0.00 0.00 4.00
1995 2159 0.984230 GGGGATGTCTTGACAGTGGA 59.016 55.000 9.39 0.00 0.00 4.02
1996 2160 1.339151 GGGGATGTCTTGACAGTGGAC 60.339 57.143 9.39 0.00 0.00 4.02
1997 2161 1.673033 GGGATGTCTTGACAGTGGACG 60.673 57.143 9.39 0.00 33.21 4.79
1998 2162 1.272490 GGATGTCTTGACAGTGGACGA 59.728 52.381 9.39 0.00 33.21 4.20
1999 2163 2.329379 GATGTCTTGACAGTGGACGAC 58.671 52.381 9.39 0.00 33.21 4.34
2045 2209 1.000896 GACCAGATTGGGGGTGTGG 60.001 63.158 0.00 0.00 43.37 4.17
2281 2445 0.464735 GCCGTGGTATGGTAATGGCA 60.465 55.000 0.00 0.00 44.03 4.92
2467 2631 3.264193 ACATGGAGGAGATTAGTGTTGCA 59.736 43.478 0.00 0.00 0.00 4.08
2706 2870 2.368439 TGGAAAATCTGGAATGCTCGG 58.632 47.619 0.00 0.00 0.00 4.63
2735 2899 6.638096 TGTGTACTTGTGTAACTGCTAGTA 57.362 37.500 0.00 0.00 38.04 1.82
2751 3152 5.883661 TGCTAGTAATTCTTCTGCATTTGC 58.116 37.500 0.00 0.00 42.50 3.68
2870 3271 9.196139 AGAATATGCTATATCCCTAGAAGACAC 57.804 37.037 0.00 0.00 0.00 3.67
2963 3364 6.020678 CAGTGTTCAAGAAAGCGTTTTTAAGG 60.021 38.462 0.00 0.00 0.00 2.69
2975 3376 3.058777 CGTTTTTAAGGGACGCTTAAGCA 60.059 43.478 26.29 11.49 42.21 3.91
3007 3414 2.827921 CAATTCACTTTGGCCCTAAGCT 59.172 45.455 13.15 0.00 43.05 3.74
3022 3429 6.407752 GGCCCTAAGCTGTAGATTAAGTGTTA 60.408 42.308 0.00 0.00 43.05 2.41
3060 3490 5.683302 GCTGTTTTTGAACTACTTCTGCTTC 59.317 40.000 0.00 0.00 0.00 3.86
3209 4569 3.337358 TGCTGTGTGAACCTGATATGTG 58.663 45.455 0.00 0.00 0.00 3.21
3492 4857 2.078849 TGTCACGGTGCTACATTCAG 57.921 50.000 2.51 0.00 0.00 3.02
3632 4997 1.330521 GCACTGAAGAAACAAGTGCGA 59.669 47.619 10.85 0.00 44.67 5.10
3646 5011 0.803768 GTGCGATGCGATCTGTGTCT 60.804 55.000 0.00 0.00 0.00 3.41
3667 5032 1.654023 GGTTGGCCAGTTATGACGGC 61.654 60.000 5.11 12.78 41.55 5.68
3727 5092 4.883759 TCTTGGATCCAGAAGATGTAGGA 58.116 43.478 15.53 0.00 34.42 2.94
3728 5093 4.651503 TCTTGGATCCAGAAGATGTAGGAC 59.348 45.833 15.53 0.00 34.42 3.85
3729 5094 3.994317 TGGATCCAGAAGATGTAGGACA 58.006 45.455 11.44 0.00 34.42 4.02
3770 5138 2.030805 GCAACCGAGCACTTGATTTCTT 60.031 45.455 0.00 0.00 0.00 2.52
3780 5148 5.713389 AGCACTTGATTTCTTCATCCAATGA 59.287 36.000 0.00 0.00 37.55 2.57
3862 5230 1.813513 CTGGAGTGGCGACTGAAAAT 58.186 50.000 5.94 0.00 30.16 1.82
3976 5344 4.036734 GTGCGGAACCACATGAATCATAAT 59.963 41.667 0.00 0.00 35.80 1.28
4038 5406 8.510505 ACTTCATTTTGTTTTGCAAGCTTTTTA 58.489 25.926 0.00 0.00 38.47 1.52
4351 5722 5.119694 CAGTTATCCAGGTTAGAAGAAGGC 58.880 45.833 0.00 0.00 0.00 4.35
4478 5852 5.350504 AAGTCCTCTACATGACAAGATGG 57.649 43.478 0.00 3.76 33.89 3.51
4588 5971 4.070009 GGAAAAAGGCGAAGAGGTAGAAA 58.930 43.478 0.00 0.00 0.00 2.52
4623 6036 5.031066 AGTGTGCTTTGAGGTGTTAGTTA 57.969 39.130 0.00 0.00 0.00 2.24
4628 6041 5.122396 GTGCTTTGAGGTGTTAGTTATCAGG 59.878 44.000 0.00 0.00 0.00 3.86
4640 6053 3.378512 AGTTATCAGGTCATGCAGGAGA 58.621 45.455 0.00 0.00 0.00 3.71
4860 6288 3.339141 CCTGGTTAGTCCTCTCTTTTGC 58.661 50.000 0.00 0.00 37.07 3.68
4865 6293 0.476611 AGTCCTCTCTTTTGCCCCCT 60.477 55.000 0.00 0.00 0.00 4.79
4876 6304 1.631405 TTGCCCCCTTGTTTGATGAG 58.369 50.000 0.00 0.00 0.00 2.90
4884 6312 4.338879 CCCTTGTTTGATGAGAAGGATGT 58.661 43.478 0.00 0.00 37.74 3.06
4890 6319 1.487976 TGATGAGAAGGATGTGCCCTC 59.512 52.381 0.00 0.00 34.95 4.30
4900 6329 2.093500 GGATGTGCCCTCGATGCATATA 60.093 50.000 15.85 6.67 40.12 0.86
4914 6343 6.025896 CGATGCATATATCTCATTTTGCCAC 58.974 40.000 0.00 0.00 0.00 5.01
4920 6350 7.521423 GCATATATCTCATTTTGCCACCGTAAA 60.521 37.037 0.00 0.00 0.00 2.01
4921 6351 6.959639 ATATCTCATTTTGCCACCGTAAAT 57.040 33.333 0.00 0.00 0.00 1.40
4963 6394 8.312564 TGAAATTCATTGTTGAGCCATATTTCA 58.687 29.630 0.00 0.00 39.46 2.69
4964 6395 9.321562 GAAATTCATTGTTGAGCCATATTTCAT 57.678 29.630 0.00 0.00 35.77 2.57
4980 6411 9.752961 CCATATTTCATTGAAATTAGACATGCA 57.247 29.630 25.24 8.47 41.64 3.96
4986 6425 4.418013 TGAAATTAGACATGCAACCACG 57.582 40.909 0.00 0.00 0.00 4.94
4990 6429 1.368641 TAGACATGCAACCACGATGC 58.631 50.000 0.00 0.00 44.08 3.91
4995 6434 1.133598 CATGCAACCACGATGCTTGAT 59.866 47.619 8.24 0.00 46.23 2.57
5010 6449 4.973168 TGCTTGATTATGAGGACCCATAC 58.027 43.478 3.03 0.00 0.00 2.39
5014 6453 4.512298 TGATTATGAGGACCCATACCCAT 58.488 43.478 3.03 0.00 0.00 4.00
5017 6456 2.587060 TGAGGACCCATACCCATTCT 57.413 50.000 0.00 0.00 0.00 2.40
5019 6458 2.777692 TGAGGACCCATACCCATTCTTC 59.222 50.000 0.00 0.00 0.00 2.87
5022 6461 3.974642 AGGACCCATACCCATTCTTCTAC 59.025 47.826 0.00 0.00 0.00 2.59
5036 6475 7.042051 CCCATTCTTCTACACGTACCATTATTG 60.042 40.741 0.00 0.00 0.00 1.90
5038 6477 7.821595 TTCTTCTACACGTACCATTATTGTG 57.178 36.000 0.00 0.00 36.64 3.33
5039 6478 7.160547 TCTTCTACACGTACCATTATTGTGA 57.839 36.000 0.00 0.00 34.72 3.58
5056 6501 6.833342 ATTGTGAAAATCAAAGACTGCAAC 57.167 33.333 0.00 0.00 0.00 4.17
5059 6504 5.806502 TGTGAAAATCAAAGACTGCAACTTG 59.193 36.000 6.58 0.00 0.00 3.16
5061 6506 5.806502 TGAAAATCAAAGACTGCAACTTGTG 59.193 36.000 6.58 7.46 0.00 3.33
5086 6531 4.019792 TGAAAATGTAGCTGAAGCCTGA 57.980 40.909 0.00 0.00 43.38 3.86
5087 6532 4.397420 TGAAAATGTAGCTGAAGCCTGAA 58.603 39.130 0.00 0.00 43.38 3.02
5088 6533 4.456911 TGAAAATGTAGCTGAAGCCTGAAG 59.543 41.667 0.00 0.00 43.38 3.02
5089 6534 2.706339 ATGTAGCTGAAGCCTGAAGG 57.294 50.000 0.00 0.00 43.38 3.46
5090 6535 1.644509 TGTAGCTGAAGCCTGAAGGA 58.355 50.000 0.00 0.00 43.38 3.36
5091 6536 2.191400 TGTAGCTGAAGCCTGAAGGAT 58.809 47.619 0.00 0.00 43.38 3.24
5092 6537 2.093288 TGTAGCTGAAGCCTGAAGGATG 60.093 50.000 0.00 0.00 43.38 3.51
5093 6538 1.283347 AGCTGAAGCCTGAAGGATGA 58.717 50.000 0.00 0.00 43.38 2.92
5094 6539 1.632409 AGCTGAAGCCTGAAGGATGAA 59.368 47.619 0.00 0.00 43.38 2.57
5095 6540 2.015587 GCTGAAGCCTGAAGGATGAAG 58.984 52.381 0.00 0.00 37.39 3.02
5096 6541 2.641305 CTGAAGCCTGAAGGATGAAGG 58.359 52.381 0.00 0.00 37.39 3.46
5097 6542 2.238144 CTGAAGCCTGAAGGATGAAGGA 59.762 50.000 0.00 0.00 37.39 3.36
5098 6543 2.848694 TGAAGCCTGAAGGATGAAGGAT 59.151 45.455 0.00 0.00 37.39 3.24
5099 6544 3.212685 GAAGCCTGAAGGATGAAGGATG 58.787 50.000 0.00 0.00 37.39 3.51
5100 6545 2.485659 AGCCTGAAGGATGAAGGATGA 58.514 47.619 0.00 0.00 37.39 2.92
5101 6546 2.172293 AGCCTGAAGGATGAAGGATGAC 59.828 50.000 0.00 0.00 37.39 3.06
5102 6547 2.092753 GCCTGAAGGATGAAGGATGACA 60.093 50.000 0.00 0.00 37.39 3.58
5103 6548 3.539604 CCTGAAGGATGAAGGATGACAC 58.460 50.000 0.00 0.00 37.39 3.67
5104 6549 3.539604 CTGAAGGATGAAGGATGACACC 58.460 50.000 0.00 0.00 0.00 4.16
5105 6550 2.093500 TGAAGGATGAAGGATGACACCG 60.093 50.000 0.00 0.00 34.73 4.94
5106 6551 1.866015 AGGATGAAGGATGACACCGA 58.134 50.000 0.00 0.00 34.73 4.69
5107 6552 2.187958 AGGATGAAGGATGACACCGAA 58.812 47.619 0.00 0.00 34.73 4.30
5108 6553 2.571653 AGGATGAAGGATGACACCGAAA 59.428 45.455 0.00 0.00 34.73 3.46
5109 6554 3.009033 AGGATGAAGGATGACACCGAAAA 59.991 43.478 0.00 0.00 34.73 2.29
5110 6555 3.127030 GGATGAAGGATGACACCGAAAAC 59.873 47.826 0.00 0.00 34.73 2.43
5111 6556 3.485463 TGAAGGATGACACCGAAAACT 57.515 42.857 0.00 0.00 34.73 2.66
5112 6557 3.138304 TGAAGGATGACACCGAAAACTG 58.862 45.455 0.00 0.00 34.73 3.16
5113 6558 3.181459 TGAAGGATGACACCGAAAACTGA 60.181 43.478 0.00 0.00 34.73 3.41
5114 6559 3.485463 AGGATGACACCGAAAACTGAA 57.515 42.857 0.00 0.00 34.73 3.02
5115 6560 3.139077 AGGATGACACCGAAAACTGAAC 58.861 45.455 0.00 0.00 34.73 3.18
5116 6561 2.875933 GGATGACACCGAAAACTGAACA 59.124 45.455 0.00 0.00 0.00 3.18
5117 6562 3.058914 GGATGACACCGAAAACTGAACAG 60.059 47.826 0.00 0.00 0.00 3.16
5118 6563 3.254470 TGACACCGAAAACTGAACAGA 57.746 42.857 8.87 0.00 0.00 3.41
5119 6564 3.804036 TGACACCGAAAACTGAACAGAT 58.196 40.909 8.87 0.00 0.00 2.90
5120 6565 4.951254 TGACACCGAAAACTGAACAGATA 58.049 39.130 8.87 0.00 0.00 1.98
5121 6566 5.361427 TGACACCGAAAACTGAACAGATAA 58.639 37.500 8.87 0.00 0.00 1.75
5122 6567 5.818336 TGACACCGAAAACTGAACAGATAAA 59.182 36.000 8.87 0.00 0.00 1.40
5123 6568 6.056428 ACACCGAAAACTGAACAGATAAAC 57.944 37.500 8.87 0.00 0.00 2.01
5124 6569 5.587043 ACACCGAAAACTGAACAGATAAACA 59.413 36.000 8.87 0.00 0.00 2.83
5125 6570 6.136071 CACCGAAAACTGAACAGATAAACAG 58.864 40.000 8.87 0.00 36.58 3.16
5126 6571 6.018262 CACCGAAAACTGAACAGATAAACAGA 60.018 38.462 8.87 0.00 34.88 3.41
5127 6572 6.710744 ACCGAAAACTGAACAGATAAACAGAT 59.289 34.615 8.87 0.00 34.88 2.90
5128 6573 7.228706 ACCGAAAACTGAACAGATAAACAGATT 59.771 33.333 8.87 0.00 34.88 2.40
5129 6574 8.717821 CCGAAAACTGAACAGATAAACAGATTA 58.282 33.333 8.87 0.00 34.88 1.75
5130 6575 9.746711 CGAAAACTGAACAGATAAACAGATTAG 57.253 33.333 8.87 0.00 34.88 1.73
5131 6576 9.548208 GAAAACTGAACAGATAAACAGATTAGC 57.452 33.333 8.87 0.00 34.88 3.09
5132 6577 8.621532 AAACTGAACAGATAAACAGATTAGCA 57.378 30.769 8.87 0.00 32.22 3.49
5133 6578 7.840342 ACTGAACAGATAAACAGATTAGCAG 57.160 36.000 8.87 0.00 32.22 4.24
5134 6579 6.314896 ACTGAACAGATAAACAGATTAGCAGC 59.685 38.462 8.87 0.00 32.22 5.25
5135 6580 5.586243 TGAACAGATAAACAGATTAGCAGCC 59.414 40.000 0.00 0.00 32.22 4.85
5136 6581 5.102953 ACAGATAAACAGATTAGCAGCCA 57.897 39.130 0.00 0.00 32.22 4.75
5143 6588 4.445452 ACAGATTAGCAGCCACAAAATG 57.555 40.909 0.00 0.00 0.00 2.32
5151 6596 4.651778 AGCAGCCACAAAATGTAGAGTTA 58.348 39.130 0.00 0.00 0.00 2.24
5152 6597 4.455877 AGCAGCCACAAAATGTAGAGTTAC 59.544 41.667 0.00 0.00 0.00 2.50
5153 6598 4.215399 GCAGCCACAAAATGTAGAGTTACA 59.785 41.667 0.00 0.00 43.55 2.41
5177 6622 8.887717 ACATAGAGAAATTTAAGCTAAGCAGTG 58.112 33.333 0.00 0.00 0.00 3.66
5178 6623 6.749923 AGAGAAATTTAAGCTAAGCAGTGG 57.250 37.500 0.00 0.00 0.00 4.00
5179 6624 6.241645 AGAGAAATTTAAGCTAAGCAGTGGT 58.758 36.000 0.00 0.00 0.00 4.16
5180 6625 7.394816 AGAGAAATTTAAGCTAAGCAGTGGTA 58.605 34.615 0.00 0.00 0.00 3.25
5181 6626 7.883311 AGAGAAATTTAAGCTAAGCAGTGGTAA 59.117 33.333 0.00 0.00 0.00 2.85
5182 6627 8.581253 AGAAATTTAAGCTAAGCAGTGGTAAT 57.419 30.769 0.00 0.00 0.00 1.89
5183 6628 9.025041 AGAAATTTAAGCTAAGCAGTGGTAATT 57.975 29.630 0.00 0.00 0.00 1.40
5187 6632 9.681062 ATTTAAGCTAAGCAGTGGTAATTAAGA 57.319 29.630 0.00 0.00 0.00 2.10
5189 6634 7.793927 AAGCTAAGCAGTGGTAATTAAGATC 57.206 36.000 0.00 0.00 0.00 2.75
5190 6635 6.292150 AGCTAAGCAGTGGTAATTAAGATCC 58.708 40.000 0.00 0.00 0.00 3.36
5191 6636 5.470437 GCTAAGCAGTGGTAATTAAGATCCC 59.530 44.000 0.00 0.00 0.00 3.85
5193 6638 3.139077 GCAGTGGTAATTAAGATCCCCG 58.861 50.000 0.00 0.00 0.00 5.73
5194 6639 3.139077 CAGTGGTAATTAAGATCCCCGC 58.861 50.000 0.00 0.00 0.00 6.13
5195 6640 2.140717 GTGGTAATTAAGATCCCCGCG 58.859 52.381 0.00 0.00 0.00 6.46
5196 6641 1.071071 TGGTAATTAAGATCCCCGCGG 59.929 52.381 21.04 21.04 0.00 6.46
5208 6653 3.414486 CCCGCGGGAAAATAAGGAT 57.586 52.632 41.82 0.00 37.50 3.24
5209 6654 0.951558 CCCGCGGGAAAATAAGGATG 59.048 55.000 41.82 6.56 37.50 3.51
5210 6655 1.675552 CCGCGGGAAAATAAGGATGT 58.324 50.000 20.10 0.00 0.00 3.06
5211 6656 1.602377 CCGCGGGAAAATAAGGATGTC 59.398 52.381 20.10 0.00 0.00 3.06
5212 6657 2.561569 CGCGGGAAAATAAGGATGTCT 58.438 47.619 0.00 0.00 0.00 3.41
5213 6658 2.544267 CGCGGGAAAATAAGGATGTCTC 59.456 50.000 0.00 0.00 0.00 3.36
5214 6659 2.879026 GCGGGAAAATAAGGATGTCTCC 59.121 50.000 0.00 0.00 42.43 3.71
5225 6670 2.381911 GGATGTCTCCTACGTTACCCA 58.618 52.381 0.00 0.00 38.65 4.51
5226 6671 2.963782 GGATGTCTCCTACGTTACCCAT 59.036 50.000 0.00 0.00 38.65 4.00
5227 6672 3.387050 GGATGTCTCCTACGTTACCCATT 59.613 47.826 0.00 0.00 38.65 3.16
5228 6673 3.880047 TGTCTCCTACGTTACCCATTG 57.120 47.619 0.00 0.00 0.00 2.82
5229 6674 2.498481 TGTCTCCTACGTTACCCATTGG 59.502 50.000 0.00 0.00 37.80 3.16
5230 6675 2.762327 GTCTCCTACGTTACCCATTGGA 59.238 50.000 3.62 0.00 34.81 3.53
5231 6676 3.196254 GTCTCCTACGTTACCCATTGGAA 59.804 47.826 3.62 0.00 34.81 3.53
5232 6677 4.035112 TCTCCTACGTTACCCATTGGAAT 58.965 43.478 3.62 0.00 34.81 3.01
5233 6678 4.472108 TCTCCTACGTTACCCATTGGAATT 59.528 41.667 3.62 0.00 34.81 2.17
5234 6679 4.519213 TCCTACGTTACCCATTGGAATTG 58.481 43.478 3.62 0.00 34.81 2.32
5235 6680 3.066203 CCTACGTTACCCATTGGAATTGC 59.934 47.826 3.62 0.00 34.81 3.56
5236 6681 2.520069 ACGTTACCCATTGGAATTGCA 58.480 42.857 3.62 0.00 34.81 4.08
5237 6682 2.230266 ACGTTACCCATTGGAATTGCAC 59.770 45.455 3.62 0.00 34.81 4.57
5238 6683 2.416701 CGTTACCCATTGGAATTGCACC 60.417 50.000 3.62 0.00 34.81 5.01
5239 6684 1.859302 TACCCATTGGAATTGCACCC 58.141 50.000 3.62 0.00 34.81 4.61
5240 6685 0.178909 ACCCATTGGAATTGCACCCA 60.179 50.000 3.62 0.00 34.81 4.51
5241 6686 0.982704 CCCATTGGAATTGCACCCAA 59.017 50.000 14.46 14.46 45.40 4.12
5242 6687 1.350351 CCCATTGGAATTGCACCCAAA 59.650 47.619 15.65 3.52 44.60 3.28
5243 6688 2.026075 CCCATTGGAATTGCACCCAAAT 60.026 45.455 15.65 5.23 44.60 2.32
5244 6689 3.011119 CCATTGGAATTGCACCCAAATG 58.989 45.455 15.65 13.60 44.60 2.32
5245 6690 3.559597 CCATTGGAATTGCACCCAAATGT 60.560 43.478 15.65 0.97 44.60 2.71
5246 6691 3.853355 TTGGAATTGCACCCAAATGTT 57.147 38.095 10.87 0.00 39.29 2.71
5247 6692 3.123157 TGGAATTGCACCCAAATGTTG 57.877 42.857 0.00 0.00 34.05 3.33
5274 6719 4.736126 TGGATACAGAATTGCGAAGAGA 57.264 40.909 0.00 0.00 46.17 3.10
5275 6720 4.686972 TGGATACAGAATTGCGAAGAGAG 58.313 43.478 0.00 0.00 46.17 3.20
5276 6721 4.402474 TGGATACAGAATTGCGAAGAGAGA 59.598 41.667 0.00 0.00 46.17 3.10
5277 6722 4.981674 GGATACAGAATTGCGAAGAGAGAG 59.018 45.833 0.00 0.00 0.00 3.20
5278 6723 5.221145 GGATACAGAATTGCGAAGAGAGAGA 60.221 44.000 0.00 0.00 0.00 3.10
5279 6724 4.108699 ACAGAATTGCGAAGAGAGAGAG 57.891 45.455 0.00 0.00 0.00 3.20
5280 6725 3.761218 ACAGAATTGCGAAGAGAGAGAGA 59.239 43.478 0.00 0.00 0.00 3.10
5281 6726 4.142403 ACAGAATTGCGAAGAGAGAGAGAG 60.142 45.833 0.00 0.00 0.00 3.20
5282 6727 4.096231 CAGAATTGCGAAGAGAGAGAGAGA 59.904 45.833 0.00 0.00 0.00 3.10
5283 6728 4.336433 AGAATTGCGAAGAGAGAGAGAGAG 59.664 45.833 0.00 0.00 0.00 3.20
5284 6729 3.342377 TTGCGAAGAGAGAGAGAGAGA 57.658 47.619 0.00 0.00 0.00 3.10
5285 6730 2.905075 TGCGAAGAGAGAGAGAGAGAG 58.095 52.381 0.00 0.00 0.00 3.20
5286 6731 2.499693 TGCGAAGAGAGAGAGAGAGAGA 59.500 50.000 0.00 0.00 0.00 3.10
5287 6732 3.126831 GCGAAGAGAGAGAGAGAGAGAG 58.873 54.545 0.00 0.00 0.00 3.20
5288 6733 3.181475 GCGAAGAGAGAGAGAGAGAGAGA 60.181 52.174 0.00 0.00 0.00 3.10
5289 6734 4.615949 CGAAGAGAGAGAGAGAGAGAGAG 58.384 52.174 0.00 0.00 0.00 3.20
5290 6735 4.339530 CGAAGAGAGAGAGAGAGAGAGAGA 59.660 50.000 0.00 0.00 0.00 3.10
5291 6736 5.507149 CGAAGAGAGAGAGAGAGAGAGAGAG 60.507 52.000 0.00 0.00 0.00 3.20
5292 6737 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
5293 6738 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
5294 6739 3.640967 AGAGAGAGAGAGAGAGAGAGAGC 59.359 52.174 0.00 0.00 0.00 4.09
5295 6740 2.363680 AGAGAGAGAGAGAGAGAGAGCG 59.636 54.545 0.00 0.00 0.00 5.03
5296 6741 1.202580 AGAGAGAGAGAGAGAGAGCGC 60.203 57.143 0.00 0.00 0.00 5.92
5297 6742 0.833287 AGAGAGAGAGAGAGAGCGCT 59.167 55.000 11.27 11.27 0.00 5.92
5298 6743 1.202580 AGAGAGAGAGAGAGAGCGCTC 60.203 57.143 30.01 30.01 40.75 5.03
5299 6744 0.530650 AGAGAGAGAGAGAGCGCTCG 60.531 60.000 30.39 0.00 45.98 5.03
5300 6745 1.498865 GAGAGAGAGAGAGCGCTCGG 61.499 65.000 30.39 0.00 45.98 4.63
5301 6746 3.181169 GAGAGAGAGAGCGCTCGGC 62.181 68.421 30.39 25.20 45.98 5.54
5316 6761 2.328099 CGGCTGGTCAAGAAGGCAC 61.328 63.158 0.00 0.00 38.83 5.01
5325 6770 3.686726 GGTCAAGAAGGCACATTCTACAG 59.313 47.826 0.00 0.00 38.59 2.74
5326 6771 4.563580 GGTCAAGAAGGCACATTCTACAGA 60.564 45.833 0.00 0.00 38.59 3.41
5338 6783 0.811915 TCTACAGAGAGAAGGCGCAC 59.188 55.000 10.83 0.00 0.00 5.34
5341 6786 1.153667 CAGAGAGAAGGCGCACTCC 60.154 63.158 10.83 8.86 34.13 3.85
5394 6841 1.956802 GGTTTGGACCGCTGAAAGG 59.043 57.895 0.00 0.00 35.91 3.11
5396 6843 1.314730 GTTTGGACCGCTGAAAGGAA 58.685 50.000 0.00 0.00 0.00 3.36
5397 6844 1.266989 GTTTGGACCGCTGAAAGGAAG 59.733 52.381 0.00 0.00 0.00 3.46
5405 6852 3.445805 ACCGCTGAAAGGAAGAAACAAAA 59.554 39.130 0.00 0.00 0.00 2.44
5406 6853 4.099419 ACCGCTGAAAGGAAGAAACAAAAT 59.901 37.500 0.00 0.00 0.00 1.82
5407 6854 4.445385 CCGCTGAAAGGAAGAAACAAAATG 59.555 41.667 0.00 0.00 0.00 2.32
5408 6855 4.445385 CGCTGAAAGGAAGAAACAAAATGG 59.555 41.667 0.00 0.00 0.00 3.16
5409 6856 4.212004 GCTGAAAGGAAGAAACAAAATGGC 59.788 41.667 0.00 0.00 0.00 4.40
5411 6858 4.098654 TGAAAGGAAGAAACAAAATGGCGA 59.901 37.500 0.00 0.00 0.00 5.54
5413 6860 2.029918 AGGAAGAAACAAAATGGCGAGC 60.030 45.455 0.00 0.00 0.00 5.03
5414 6861 2.029918 GGAAGAAACAAAATGGCGAGCT 60.030 45.455 0.00 0.00 0.00 4.09
5433 6882 5.486526 GAGCTGAGGAAAAATCTCTGAAGA 58.513 41.667 0.00 0.00 33.74 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 4.156556 TCAGAACAGAGGCATAACATTTGC 59.843 41.667 0.00 0.00 39.41 3.68
11 12 5.885230 TCAGAACAGAGGCATAACATTTG 57.115 39.130 0.00 0.00 0.00 2.32
12 13 6.899393 TTTCAGAACAGAGGCATAACATTT 57.101 33.333 0.00 0.00 0.00 2.32
13 14 6.899393 TTTTCAGAACAGAGGCATAACATT 57.101 33.333 0.00 0.00 0.00 2.71
14 15 6.899393 TTTTTCAGAACAGAGGCATAACAT 57.101 33.333 0.00 0.00 0.00 2.71
36 37 9.693739 ATCTTTGTAATTTTGGTTTCCCTTTTT 57.306 25.926 0.00 0.00 0.00 1.94
37 38 9.119418 CATCTTTGTAATTTTGGTTTCCCTTTT 57.881 29.630 0.00 0.00 0.00 2.27
38 39 7.719193 CCATCTTTGTAATTTTGGTTTCCCTTT 59.281 33.333 0.00 0.00 0.00 3.11
39 40 7.147391 ACCATCTTTGTAATTTTGGTTTCCCTT 60.147 33.333 0.00 0.00 33.83 3.95
40 41 6.328934 ACCATCTTTGTAATTTTGGTTTCCCT 59.671 34.615 0.00 0.00 33.83 4.20
41 42 6.426633 CACCATCTTTGTAATTTTGGTTTCCC 59.573 38.462 0.00 0.00 35.35 3.97
42 43 6.989759 ACACCATCTTTGTAATTTTGGTTTCC 59.010 34.615 0.00 0.00 35.35 3.13
43 44 8.334632 CAACACCATCTTTGTAATTTTGGTTTC 58.665 33.333 0.00 0.00 35.35 2.78
44 45 7.201688 GCAACACCATCTTTGTAATTTTGGTTT 60.202 33.333 0.00 0.00 35.35 3.27
45 46 6.259829 GCAACACCATCTTTGTAATTTTGGTT 59.740 34.615 0.00 0.00 35.35 3.67
46 47 5.757808 GCAACACCATCTTTGTAATTTTGGT 59.242 36.000 0.00 0.00 37.96 3.67
47 48 5.179182 GGCAACACCATCTTTGTAATTTTGG 59.821 40.000 0.00 0.00 38.86 3.28
48 49 5.757320 TGGCAACACCATCTTTGTAATTTTG 59.243 36.000 0.00 0.00 46.36 2.44
49 50 5.923204 TGGCAACACCATCTTTGTAATTTT 58.077 33.333 0.00 0.00 46.36 1.82
50 51 5.543507 TGGCAACACCATCTTTGTAATTT 57.456 34.783 0.00 0.00 46.36 1.82
66 67 0.173255 AGTGCTTGTGTGTTGGCAAC 59.827 50.000 23.12 23.12 36.43 4.17
67 68 0.894141 AAGTGCTTGTGTGTTGGCAA 59.106 45.000 0.00 0.00 36.43 4.52
68 69 0.173029 CAAGTGCTTGTGTGTTGGCA 59.827 50.000 3.91 0.00 35.92 4.92
69 70 1.147557 GCAAGTGCTTGTGTGTTGGC 61.148 55.000 12.75 0.00 42.31 4.52
70 71 0.528249 GGCAAGTGCTTGTGTGTTGG 60.528 55.000 12.75 0.00 42.31 3.77
71 72 0.528249 GGGCAAGTGCTTGTGTGTTG 60.528 55.000 12.75 0.00 42.31 3.33
72 73 0.684153 AGGGCAAGTGCTTGTGTGTT 60.684 50.000 12.75 0.00 42.31 3.32
73 74 1.076777 AGGGCAAGTGCTTGTGTGT 60.077 52.632 12.75 0.00 42.31 3.72
74 75 0.820891 AGAGGGCAAGTGCTTGTGTG 60.821 55.000 12.75 0.00 42.31 3.82
75 76 0.536006 GAGAGGGCAAGTGCTTGTGT 60.536 55.000 12.75 0.00 42.31 3.72
76 77 0.535780 TGAGAGGGCAAGTGCTTGTG 60.536 55.000 12.75 0.00 42.31 3.33
77 78 0.183492 TTGAGAGGGCAAGTGCTTGT 59.817 50.000 12.75 0.00 42.31 3.16
78 79 1.471684 GATTGAGAGGGCAAGTGCTTG 59.528 52.381 7.51 7.51 43.14 4.01
79 80 1.074405 TGATTGAGAGGGCAAGTGCTT 59.926 47.619 2.85 0.00 41.70 3.91
88 89 5.922053 TGTTGATGTAGATGATTGAGAGGG 58.078 41.667 0.00 0.00 0.00 4.30
99 100 5.829924 GTGGGGATGATTTGTTGATGTAGAT 59.170 40.000 0.00 0.00 0.00 1.98
100 101 5.192927 GTGGGGATGATTTGTTGATGTAGA 58.807 41.667 0.00 0.00 0.00 2.59
110 111 1.832883 TTGACCGTGGGGATGATTTG 58.167 50.000 0.00 0.00 36.97 2.32
156 164 4.397481 TGCATGACCAACACAAATTTGA 57.603 36.364 24.64 0.00 0.00 2.69
161 169 4.397481 TTCAATGCATGACCAACACAAA 57.603 36.364 0.00 0.00 37.92 2.83
171 179 2.562298 GGAAGGGTGTTTCAATGCATGA 59.438 45.455 0.00 0.00 35.85 3.07
186 194 6.016276 CGGGTAGATTCATAAAAATGGAAGGG 60.016 42.308 0.00 0.00 0.00 3.95
189 197 5.830991 CCCGGGTAGATTCATAAAAATGGAA 59.169 40.000 14.18 0.00 0.00 3.53
197 205 5.512298 TCGATATCCCGGGTAGATTCATAA 58.488 41.667 22.86 0.00 0.00 1.90
206 214 0.675837 CGCTCTCGATATCCCGGGTA 60.676 60.000 22.86 12.85 38.10 3.69
219 227 0.734253 ACATCGTGAGTTGCGCTCTC 60.734 55.000 20.37 20.37 44.41 3.20
288 304 1.860950 GTGGGTGTCATGAATCGATCG 59.139 52.381 9.36 9.36 0.00 3.69
289 305 2.868583 CTGTGGGTGTCATGAATCGATC 59.131 50.000 0.00 0.00 0.00 3.69
290 306 2.501316 TCTGTGGGTGTCATGAATCGAT 59.499 45.455 0.00 0.00 0.00 3.59
291 307 1.899142 TCTGTGGGTGTCATGAATCGA 59.101 47.619 0.00 0.00 0.00 3.59
292 308 2.385013 TCTGTGGGTGTCATGAATCG 57.615 50.000 0.00 0.00 0.00 3.34
293 309 3.441572 CCTTTCTGTGGGTGTCATGAATC 59.558 47.826 0.00 0.00 0.00 2.52
294 310 3.424703 CCTTTCTGTGGGTGTCATGAAT 58.575 45.455 0.00 0.00 0.00 2.57
295 311 2.488891 CCCTTTCTGTGGGTGTCATGAA 60.489 50.000 0.00 0.00 39.82 2.57
336 352 7.466804 AGTGATGTTCTTTTACATAAAGGGGA 58.533 34.615 0.00 0.00 38.80 4.81
341 357 8.596271 TGACGAGTGATGTTCTTTTACATAAA 57.404 30.769 0.00 0.00 38.80 1.40
362 378 4.093556 GTCCTAGGAAAGAGCATTTTGACG 59.906 45.833 14.65 0.00 0.00 4.35
365 381 3.375299 CGGTCCTAGGAAAGAGCATTTTG 59.625 47.826 14.65 0.00 0.00 2.44
366 382 3.610911 CGGTCCTAGGAAAGAGCATTTT 58.389 45.455 14.65 0.00 0.00 1.82
367 383 2.092914 CCGGTCCTAGGAAAGAGCATTT 60.093 50.000 14.65 0.00 0.00 2.32
375 391 0.037160 GTTTGGCCGGTCCTAGGAAA 59.963 55.000 14.65 0.00 35.26 3.13
378 394 0.676782 CTTGTTTGGCCGGTCCTAGG 60.677 60.000 2.12 0.82 35.26 3.02
404 420 2.163211 GTGAAGCTGCCTTTTGAGGATC 59.837 50.000 0.00 0.00 0.00 3.36
454 471 1.425448 AGCAAGCCCATAGGAATACCC 59.575 52.381 0.00 0.00 36.73 3.69
455 472 2.959465 AGCAAGCCCATAGGAATACC 57.041 50.000 0.00 0.00 33.47 2.73
462 479 3.878778 AGTTAGTGAAGCAAGCCCATAG 58.121 45.455 0.00 0.00 0.00 2.23
464 481 2.821969 CAAGTTAGTGAAGCAAGCCCAT 59.178 45.455 0.00 0.00 0.00 4.00
499 516 9.332502 ACTATATTTGACCGTGTTGCATATAAA 57.667 29.630 0.00 0.00 0.00 1.40
500 517 8.896320 ACTATATTTGACCGTGTTGCATATAA 57.104 30.769 0.00 0.00 0.00 0.98
501 518 8.896320 AACTATATTTGACCGTGTTGCATATA 57.104 30.769 0.00 0.00 0.00 0.86
502 519 7.801716 AACTATATTTGACCGTGTTGCATAT 57.198 32.000 0.00 0.00 0.00 1.78
512 529 5.961395 AGCAACGTAACTATATTTGACCG 57.039 39.130 0.00 0.00 0.00 4.79
574 591 2.700773 GCGACCCAACAATCCAGCC 61.701 63.158 0.00 0.00 0.00 4.85
576 593 2.009774 CTAAGCGACCCAACAATCCAG 58.990 52.381 0.00 0.00 0.00 3.86
592 646 8.965172 CGTACAATATACTGCTTACCAACTAAG 58.035 37.037 0.00 0.00 35.74 2.18
594 648 6.919662 GCGTACAATATACTGCTTACCAACTA 59.080 38.462 0.00 0.00 0.00 2.24
599 653 5.694910 ACATGCGTACAATATACTGCTTACC 59.305 40.000 0.00 0.00 0.00 2.85
600 654 6.764877 ACATGCGTACAATATACTGCTTAC 57.235 37.500 0.00 0.00 0.00 2.34
603 657 6.538742 AGAAAACATGCGTACAATATACTGCT 59.461 34.615 0.00 0.00 0.00 4.24
604 658 6.715464 AGAAAACATGCGTACAATATACTGC 58.285 36.000 0.00 0.00 0.00 4.40
605 659 7.011016 TGGAGAAAACATGCGTACAATATACTG 59.989 37.037 0.00 0.00 0.00 2.74
606 660 7.045416 TGGAGAAAACATGCGTACAATATACT 58.955 34.615 0.00 0.00 0.00 2.12
607 661 7.241663 TGGAGAAAACATGCGTACAATATAC 57.758 36.000 0.00 0.00 0.00 1.47
612 666 2.225491 GCTGGAGAAAACATGCGTACAA 59.775 45.455 0.00 0.00 0.00 2.41
614 668 1.201921 CGCTGGAGAAAACATGCGTAC 60.202 52.381 0.00 0.00 38.81 3.67
616 670 0.602638 TCGCTGGAGAAAACATGCGT 60.603 50.000 0.00 0.00 43.23 5.24
629 774 0.383231 GGATGAGGCAATTTCGCTGG 59.617 55.000 0.00 0.00 0.00 4.85
670 815 2.116533 CCGAAATAACGGCCCCACC 61.117 63.158 0.00 0.00 46.20 4.61
690 835 4.340097 ACATGTGAATGTGGCATTCTATGG 59.660 41.667 24.79 15.71 32.72 2.74
691 836 5.509716 ACATGTGAATGTGGCATTCTATG 57.490 39.130 22.40 22.40 32.79 2.23
692 837 7.828508 ATTACATGTGAATGTGGCATTCTAT 57.171 32.000 18.74 12.16 36.08 1.98
693 838 7.643569 AATTACATGTGAATGTGGCATTCTA 57.356 32.000 18.74 10.81 36.08 2.10
694 839 6.534475 AATTACATGTGAATGTGGCATTCT 57.466 33.333 18.74 5.10 36.08 2.40
695 840 7.463119 CGAAAATTACATGTGAATGTGGCATTC 60.463 37.037 9.11 13.21 36.08 2.67
696 841 6.310956 CGAAAATTACATGTGAATGTGGCATT 59.689 34.615 9.11 0.00 36.08 3.56
697 842 5.806502 CGAAAATTACATGTGAATGTGGCAT 59.193 36.000 9.11 0.00 36.08 4.40
698 843 5.159925 CGAAAATTACATGTGAATGTGGCA 58.840 37.500 9.11 0.00 36.08 4.92
699 844 4.562394 CCGAAAATTACATGTGAATGTGGC 59.438 41.667 9.11 0.00 36.08 5.01
700 845 5.572511 CACCGAAAATTACATGTGAATGTGG 59.427 40.000 9.11 4.99 36.08 4.17
701 846 6.377780 TCACCGAAAATTACATGTGAATGTG 58.622 36.000 9.11 8.31 36.08 3.21
702 847 6.567687 TCACCGAAAATTACATGTGAATGT 57.432 33.333 9.11 0.00 38.49 2.71
737 882 4.088762 GTGGCACATCACGCACGG 62.089 66.667 13.86 0.00 44.52 4.94
795 940 3.084579 CTGATGAACACTCGCGGC 58.915 61.111 6.13 0.00 0.00 6.53
839 984 3.435186 GGCTTCGTGGCAGCTTCC 61.435 66.667 0.00 0.00 41.37 3.46
881 1026 1.876416 CGGCTCGGGTTAATATGGGTG 60.876 57.143 0.00 0.00 0.00 4.61
910 1055 1.228154 AGAGTTTGCCGGGTCAACC 60.228 57.895 2.18 0.00 0.00 3.77
1449 1608 2.653702 GAGATGGATCGGCGGGAG 59.346 66.667 7.21 0.00 0.00 4.30
1450 1609 2.917751 GGAGATGGATCGGCGGGA 60.918 66.667 7.21 0.00 0.00 5.14
1452 1611 2.919856 AGGGAGATGGATCGGCGG 60.920 66.667 7.21 0.00 0.00 6.13
1453 1612 2.653702 GAGGGAGATGGATCGGCG 59.346 66.667 0.00 0.00 0.00 6.46
1454 1613 1.838846 TGGAGGGAGATGGATCGGC 60.839 63.158 0.00 0.00 0.00 5.54
1455 1614 1.476007 GGTGGAGGGAGATGGATCGG 61.476 65.000 0.00 0.00 0.00 4.18
1456 1615 1.476007 GGGTGGAGGGAGATGGATCG 61.476 65.000 0.00 0.00 0.00 3.69
1457 1616 1.476007 CGGGTGGAGGGAGATGGATC 61.476 65.000 0.00 0.00 0.00 3.36
1458 1617 1.460305 CGGGTGGAGGGAGATGGAT 60.460 63.158 0.00 0.00 0.00 3.41
1459 1618 2.041922 CGGGTGGAGGGAGATGGA 60.042 66.667 0.00 0.00 0.00 3.41
1460 1619 3.866582 GCGGGTGGAGGGAGATGG 61.867 72.222 0.00 0.00 0.00 3.51
1461 1620 3.866582 GGCGGGTGGAGGGAGATG 61.867 72.222 0.00 0.00 0.00 2.90
1495 1659 1.521010 CTCTGCTCCACCATCAGCG 60.521 63.158 0.00 0.00 38.59 5.18
1496 1660 1.818785 GCTCTGCTCCACCATCAGC 60.819 63.158 0.00 0.00 36.08 4.26
1497 1661 1.521010 CGCTCTGCTCCACCATCAG 60.521 63.158 0.00 0.00 0.00 2.90
1498 1662 2.580815 CGCTCTGCTCCACCATCA 59.419 61.111 0.00 0.00 0.00 3.07
1499 1663 2.202987 CCGCTCTGCTCCACCATC 60.203 66.667 0.00 0.00 0.00 3.51
1965 2129 0.465705 GACATCCCCAATCTGCTCGA 59.534 55.000 0.00 0.00 0.00 4.04
1970 2134 3.276857 CTGTCAAGACATCCCCAATCTG 58.723 50.000 3.01 0.00 41.01 2.90
1971 2135 2.915604 ACTGTCAAGACATCCCCAATCT 59.084 45.455 3.01 0.00 41.01 2.40
1972 2136 3.012518 CACTGTCAAGACATCCCCAATC 58.987 50.000 3.01 0.00 41.01 2.67
1973 2137 2.291153 CCACTGTCAAGACATCCCCAAT 60.291 50.000 3.01 0.00 41.01 3.16
1974 2138 1.073763 CCACTGTCAAGACATCCCCAA 59.926 52.381 3.01 0.00 41.01 4.12
1975 2139 0.692476 CCACTGTCAAGACATCCCCA 59.308 55.000 3.01 0.00 41.01 4.96
1976 2140 0.984230 TCCACTGTCAAGACATCCCC 59.016 55.000 3.01 0.00 41.01 4.81
1977 2141 1.673033 CGTCCACTGTCAAGACATCCC 60.673 57.143 3.01 0.00 41.01 3.85
1978 2142 1.272490 TCGTCCACTGTCAAGACATCC 59.728 52.381 3.01 0.00 41.01 3.51
1979 2143 2.329379 GTCGTCCACTGTCAAGACATC 58.671 52.381 3.01 0.00 41.01 3.06
1980 2144 1.000955 GGTCGTCCACTGTCAAGACAT 59.999 52.381 3.01 0.00 41.01 3.06
1981 2145 0.387929 GGTCGTCCACTGTCAAGACA 59.612 55.000 2.56 2.56 39.32 3.41
1982 2146 0.387929 TGGTCGTCCACTGTCAAGAC 59.612 55.000 0.00 0.00 39.03 3.01
1983 2147 0.673985 CTGGTCGTCCACTGTCAAGA 59.326 55.000 0.00 0.00 39.03 3.02
1984 2148 0.673985 TCTGGTCGTCCACTGTCAAG 59.326 55.000 0.00 0.00 39.03 3.02
1985 2149 1.338107 ATCTGGTCGTCCACTGTCAA 58.662 50.000 0.00 0.00 39.03 3.18
1986 2150 1.000843 CAATCTGGTCGTCCACTGTCA 59.999 52.381 0.00 0.00 39.03 3.58
1987 2151 1.673033 CCAATCTGGTCGTCCACTGTC 60.673 57.143 0.00 0.00 39.03 3.51
1988 2152 0.321671 CCAATCTGGTCGTCCACTGT 59.678 55.000 0.00 0.00 39.03 3.55
1989 2153 0.391661 CCCAATCTGGTCGTCCACTG 60.392 60.000 0.00 0.00 39.03 3.66
1990 2154 1.553690 CCCCAATCTGGTCGTCCACT 61.554 60.000 0.00 0.00 39.03 4.00
1991 2155 1.078426 CCCCAATCTGGTCGTCCAC 60.078 63.158 0.00 0.00 39.03 4.02
1992 2156 0.620410 ATCCCCAATCTGGTCGTCCA 60.620 55.000 0.39 0.39 42.05 4.02
1993 2157 0.179045 CATCCCCAATCTGGTCGTCC 60.179 60.000 0.00 0.00 35.17 4.79
1994 2158 0.541863 ACATCCCCAATCTGGTCGTC 59.458 55.000 0.00 0.00 35.17 4.20
1995 2159 0.991920 AACATCCCCAATCTGGTCGT 59.008 50.000 0.00 0.00 35.17 4.34
1996 2160 2.128771 AAACATCCCCAATCTGGTCG 57.871 50.000 0.00 0.00 35.17 4.79
1997 2161 3.193479 GTCAAAACATCCCCAATCTGGTC 59.807 47.826 0.00 0.00 35.17 4.02
1998 2162 3.165071 GTCAAAACATCCCCAATCTGGT 58.835 45.455 0.00 0.00 35.17 4.00
1999 2163 3.164268 TGTCAAAACATCCCCAATCTGG 58.836 45.455 0.00 0.00 37.25 3.86
2045 2209 0.524862 CCAATCTGCTTGTCCACTGC 59.475 55.000 0.00 0.00 32.61 4.40
2281 2445 3.367498 GGAGTTCAGTGCACGTATTCTCT 60.367 47.826 12.01 5.02 0.00 3.10
2467 2631 6.912951 ACGCCATTACTAGTGGTATAATCT 57.087 37.500 5.39 0.00 39.01 2.40
2587 2751 0.807496 GTGTGGAGAAATCTGCCAGC 59.193 55.000 0.00 0.00 32.95 4.85
2688 2852 1.745087 TGCCGAGCATTCCAGATTTTC 59.255 47.619 0.00 0.00 31.71 2.29
2706 2870 5.679906 CAGTTACACAAGTACACAAGATGC 58.320 41.667 0.00 0.00 0.00 3.91
2710 2874 5.983720 ACTAGCAGTTACACAAGTACACAAG 59.016 40.000 0.00 0.00 0.00 3.16
2714 2878 8.582437 AGAATTACTAGCAGTTACACAAGTACA 58.418 33.333 0.00 0.00 0.00 2.90
2735 2899 6.037830 GCAATTATGGCAAATGCAGAAGAATT 59.962 34.615 7.80 5.06 44.36 2.17
2751 3152 7.516198 AGGCAGAAGTAATTAGCAATTATGG 57.484 36.000 2.85 0.00 35.92 2.74
2870 3271 4.643334 TGATCATTCAAATTCTGCCTCTGG 59.357 41.667 0.00 0.00 0.00 3.86
2963 3364 0.670546 TGCTCAGTGCTTAAGCGTCC 60.671 55.000 21.97 12.43 45.83 4.79
2975 3376 5.111293 CCAAAGTGAATTGTTTTGCTCAGT 58.889 37.500 0.00 0.00 32.01 3.41
2987 3394 2.827921 CAGCTTAGGGCCAAAGTGAATT 59.172 45.455 16.09 0.00 43.05 2.17
2988 3395 2.225117 ACAGCTTAGGGCCAAAGTGAAT 60.225 45.455 16.09 1.36 43.05 2.57
2992 3399 2.266279 TCTACAGCTTAGGGCCAAAGT 58.734 47.619 16.09 0.00 43.05 2.66
3177 4535 4.990426 GGTTCACACAGCAAGCAAAATAAT 59.010 37.500 0.00 0.00 0.00 1.28
3209 4569 2.293122 TGCAGTTCACACCATAGCAAAC 59.707 45.455 0.00 0.00 0.00 2.93
3492 4857 3.131933 TGCAGAAGAAGGATCTACAGAGC 59.868 47.826 0.00 0.00 33.77 4.09
3550 4915 6.878923 CAGACTGTGTAATTTGATTACTGGGA 59.121 38.462 10.98 0.00 44.17 4.37
3632 4997 0.615331 AACCCAGACACAGATCGCAT 59.385 50.000 0.00 0.00 0.00 4.73
3646 5011 0.322098 CGTCATAACTGGCCAACCCA 60.322 55.000 7.01 0.00 42.79 4.51
3667 5032 1.129917 ACTCCTCATCAGCATCCTGG 58.870 55.000 0.00 0.00 39.61 4.45
3727 5092 6.230472 TGCAGTACAATTCATACTCTGTTGT 58.770 36.000 0.00 0.00 36.94 3.32
3728 5093 6.726258 TGCAGTACAATTCATACTCTGTTG 57.274 37.500 0.00 0.00 30.22 3.33
3729 5094 6.149474 GGTTGCAGTACAATTCATACTCTGTT 59.851 38.462 0.00 0.00 41.27 3.16
3770 5138 5.563592 ACTGTCAAACATCTCATTGGATGA 58.436 37.500 16.95 0.00 44.01 2.92
3780 5148 5.679638 GCAAACTCCAAACTGTCAAACATCT 60.680 40.000 0.00 0.00 0.00 2.90
3862 5230 6.878923 CACTATCACCAAGATAACCAAACTGA 59.121 38.462 0.00 0.00 38.69 3.41
3907 5275 4.681942 GTCCACGATTCAGATGTATACTGC 59.318 45.833 4.17 0.00 35.61 4.40
3976 5344 3.742385 TGCATGTGAGAAGACAACATGA 58.258 40.909 16.84 2.31 40.18 3.07
4038 5406 9.525826 GAGGGAATTTATAGGTGATCATTCAAT 57.474 33.333 0.00 0.00 32.48 2.57
4071 5442 9.944376 AACTTCAGACATTTGACTTAAGCTATA 57.056 29.630 1.29 0.00 28.83 1.31
4073 5444 7.307989 GCAACTTCAGACATTTGACTTAAGCTA 60.308 37.037 1.29 0.00 28.83 3.32
4074 5445 6.514048 GCAACTTCAGACATTTGACTTAAGCT 60.514 38.462 1.29 0.00 28.83 3.74
4075 5446 5.626955 GCAACTTCAGACATTTGACTTAAGC 59.373 40.000 1.29 0.00 28.83 3.09
4076 5447 6.854892 CAGCAACTTCAGACATTTGACTTAAG 59.145 38.462 0.00 0.00 31.00 1.85
4077 5448 6.728200 CAGCAACTTCAGACATTTGACTTAA 58.272 36.000 0.00 0.00 0.00 1.85
4078 5449 5.277974 GCAGCAACTTCAGACATTTGACTTA 60.278 40.000 0.00 0.00 0.00 2.24
4079 5450 4.498682 GCAGCAACTTCAGACATTTGACTT 60.499 41.667 0.00 0.00 0.00 3.01
4095 5466 3.968649 TGAAATGTTCAGAAGCAGCAAC 58.031 40.909 0.00 0.00 34.08 4.17
4215 5586 2.895372 GGATTGGCAGGTACCGCG 60.895 66.667 18.24 0.00 0.00 6.46
4422 5793 2.422597 CAGAACTTGATTGCGTACCCA 58.577 47.619 0.00 0.00 0.00 4.51
4478 5852 1.064060 AGTCGAGCAAACTTTGTGCAC 59.936 47.619 10.75 10.75 44.74 4.57
4588 5971 5.105392 TCAAAGCACACTTCTTTGGAAATGT 60.105 36.000 13.42 0.00 46.22 2.71
4607 6020 6.464222 TGACCTGATAACTAACACCTCAAAG 58.536 40.000 0.00 0.00 0.00 2.77
4623 6036 1.761784 GAGTCTCCTGCATGACCTGAT 59.238 52.381 0.00 0.00 34.02 2.90
4628 6041 0.532573 TTCCGAGTCTCCTGCATGAC 59.467 55.000 0.00 6.55 0.00 3.06
4860 6288 2.041620 TCCTTCTCATCAAACAAGGGGG 59.958 50.000 0.00 0.00 36.75 5.40
4865 6293 3.507233 GGCACATCCTTCTCATCAAACAA 59.493 43.478 0.00 0.00 0.00 2.83
4876 6304 1.162800 GCATCGAGGGCACATCCTTC 61.163 60.000 0.00 0.00 37.25 3.46
4884 6312 3.099141 TGAGATATATGCATCGAGGGCA 58.901 45.455 15.75 15.75 46.66 5.36
4890 6319 6.025896 GTGGCAAAATGAGATATATGCATCG 58.974 40.000 0.19 0.00 35.57 3.84
4900 6329 5.659440 AATTTACGGTGGCAAAATGAGAT 57.341 34.783 0.00 0.00 0.00 2.75
4939 6369 9.675464 AATGAAATATGGCTCAACAATGAATTT 57.325 25.926 0.00 0.00 34.49 1.82
4963 6394 5.182950 TCGTGGTTGCATGTCTAATTTCAAT 59.817 36.000 0.00 0.00 0.00 2.57
4964 6395 4.517075 TCGTGGTTGCATGTCTAATTTCAA 59.483 37.500 0.00 0.00 0.00 2.69
4980 6411 3.879295 CCTCATAATCAAGCATCGTGGTT 59.121 43.478 0.00 0.00 38.82 3.67
4986 6425 4.090761 TGGGTCCTCATAATCAAGCATC 57.909 45.455 0.00 0.00 0.00 3.91
4990 6429 4.350816 TGGGTATGGGTCCTCATAATCAAG 59.649 45.833 2.63 0.00 32.18 3.02
4995 6434 4.577096 AGAATGGGTATGGGTCCTCATAA 58.423 43.478 2.63 0.00 32.18 1.90
5010 6449 3.880047 TGGTACGTGTAGAAGAATGGG 57.120 47.619 0.00 0.00 0.00 4.00
5014 6453 7.604549 TCACAATAATGGTACGTGTAGAAGAA 58.395 34.615 0.00 0.00 0.00 2.52
5017 6456 8.604640 TTTTCACAATAATGGTACGTGTAGAA 57.395 30.769 0.00 0.00 0.00 2.10
5019 6458 8.661257 TGATTTTCACAATAATGGTACGTGTAG 58.339 33.333 0.00 0.00 0.00 2.74
5022 6461 8.735303 TTTGATTTTCACAATAATGGTACGTG 57.265 30.769 0.00 0.00 0.00 4.49
5036 6475 5.807011 ACAAGTTGCAGTCTTTGATTTTCAC 59.193 36.000 1.81 0.00 0.00 3.18
5038 6477 6.264909 CACAAGTTGCAGTCTTTGATTTTC 57.735 37.500 1.81 0.00 0.00 2.29
5056 6501 6.426980 TCAGCTACATTTTCATAGCACAAG 57.573 37.500 6.08 0.00 45.22 3.16
5059 6504 5.269313 GCTTCAGCTACATTTTCATAGCAC 58.731 41.667 6.08 0.00 45.22 4.40
5061 6506 4.578105 AGGCTTCAGCTACATTTTCATAGC 59.422 41.667 0.00 0.00 43.49 2.97
5062 6507 5.819379 TCAGGCTTCAGCTACATTTTCATAG 59.181 40.000 0.00 0.00 41.70 2.23
5086 6531 2.187958 TCGGTGTCATCCTTCATCCTT 58.812 47.619 0.00 0.00 0.00 3.36
5087 6532 1.866015 TCGGTGTCATCCTTCATCCT 58.134 50.000 0.00 0.00 0.00 3.24
5088 6533 2.691409 TTCGGTGTCATCCTTCATCC 57.309 50.000 0.00 0.00 0.00 3.51
5089 6534 4.003648 AGTTTTCGGTGTCATCCTTCATC 58.996 43.478 0.00 0.00 0.00 2.92
5090 6535 3.753272 CAGTTTTCGGTGTCATCCTTCAT 59.247 43.478 0.00 0.00 0.00 2.57
5091 6536 3.138304 CAGTTTTCGGTGTCATCCTTCA 58.862 45.455 0.00 0.00 0.00 3.02
5092 6537 3.399330 TCAGTTTTCGGTGTCATCCTTC 58.601 45.455 0.00 0.00 0.00 3.46
5093 6538 3.485463 TCAGTTTTCGGTGTCATCCTT 57.515 42.857 0.00 0.00 0.00 3.36
5094 6539 3.139077 GTTCAGTTTTCGGTGTCATCCT 58.861 45.455 0.00 0.00 0.00 3.24
5095 6540 2.875933 TGTTCAGTTTTCGGTGTCATCC 59.124 45.455 0.00 0.00 0.00 3.51
5096 6541 3.807622 TCTGTTCAGTTTTCGGTGTCATC 59.192 43.478 0.00 0.00 0.00 2.92
5097 6542 3.804036 TCTGTTCAGTTTTCGGTGTCAT 58.196 40.909 0.00 0.00 0.00 3.06
5098 6543 3.254470 TCTGTTCAGTTTTCGGTGTCA 57.746 42.857 0.00 0.00 0.00 3.58
5099 6544 5.917541 TTATCTGTTCAGTTTTCGGTGTC 57.082 39.130 0.00 0.00 0.00 3.67
5100 6545 5.587043 TGTTTATCTGTTCAGTTTTCGGTGT 59.413 36.000 0.00 0.00 0.00 4.16
5101 6546 6.018262 TCTGTTTATCTGTTCAGTTTTCGGTG 60.018 38.462 0.00 0.00 0.00 4.94
5102 6547 6.053005 TCTGTTTATCTGTTCAGTTTTCGGT 58.947 36.000 0.00 0.00 0.00 4.69
5103 6548 6.539649 TCTGTTTATCTGTTCAGTTTTCGG 57.460 37.500 0.00 0.00 0.00 4.30
5104 6549 9.746711 CTAATCTGTTTATCTGTTCAGTTTTCG 57.253 33.333 0.00 0.00 0.00 3.46
5105 6550 9.548208 GCTAATCTGTTTATCTGTTCAGTTTTC 57.452 33.333 0.00 0.00 0.00 2.29
5106 6551 9.066892 TGCTAATCTGTTTATCTGTTCAGTTTT 57.933 29.630 0.00 0.00 0.00 2.43
5107 6552 8.621532 TGCTAATCTGTTTATCTGTTCAGTTT 57.378 30.769 0.00 0.00 0.00 2.66
5108 6553 7.148340 GCTGCTAATCTGTTTATCTGTTCAGTT 60.148 37.037 0.00 0.00 0.00 3.16
5109 6554 6.314896 GCTGCTAATCTGTTTATCTGTTCAGT 59.685 38.462 0.00 0.00 0.00 3.41
5110 6555 6.238320 GGCTGCTAATCTGTTTATCTGTTCAG 60.238 42.308 0.00 0.00 0.00 3.02
5111 6556 5.586243 GGCTGCTAATCTGTTTATCTGTTCA 59.414 40.000 0.00 0.00 0.00 3.18
5112 6557 5.586243 TGGCTGCTAATCTGTTTATCTGTTC 59.414 40.000 0.00 0.00 0.00 3.18
5113 6558 5.355350 GTGGCTGCTAATCTGTTTATCTGTT 59.645 40.000 0.00 0.00 0.00 3.16
5114 6559 4.878397 GTGGCTGCTAATCTGTTTATCTGT 59.122 41.667 0.00 0.00 0.00 3.41
5115 6560 4.877823 TGTGGCTGCTAATCTGTTTATCTG 59.122 41.667 0.00 0.00 0.00 2.90
5116 6561 5.102953 TGTGGCTGCTAATCTGTTTATCT 57.897 39.130 0.00 0.00 0.00 1.98
5117 6562 5.818136 TTGTGGCTGCTAATCTGTTTATC 57.182 39.130 0.00 0.00 0.00 1.75
5118 6563 6.588719 TTTTGTGGCTGCTAATCTGTTTAT 57.411 33.333 0.00 0.00 0.00 1.40
5119 6564 6.015519 ACATTTTGTGGCTGCTAATCTGTTTA 60.016 34.615 0.00 0.00 0.00 2.01
5120 6565 4.935352 TTTTGTGGCTGCTAATCTGTTT 57.065 36.364 0.00 0.00 0.00 2.83
5121 6566 4.281688 ACATTTTGTGGCTGCTAATCTGTT 59.718 37.500 0.00 0.00 0.00 3.16
5122 6567 3.828451 ACATTTTGTGGCTGCTAATCTGT 59.172 39.130 0.00 0.00 0.00 3.41
5123 6568 4.445452 ACATTTTGTGGCTGCTAATCTG 57.555 40.909 0.00 0.00 0.00 2.90
5124 6569 5.500234 TCTACATTTTGTGGCTGCTAATCT 58.500 37.500 0.00 0.00 0.00 2.40
5125 6570 5.355350 ACTCTACATTTTGTGGCTGCTAATC 59.645 40.000 0.00 0.00 0.00 1.75
5126 6571 5.256474 ACTCTACATTTTGTGGCTGCTAAT 58.744 37.500 0.00 0.00 0.00 1.73
5127 6572 4.651778 ACTCTACATTTTGTGGCTGCTAA 58.348 39.130 0.00 0.00 0.00 3.09
5128 6573 4.286297 ACTCTACATTTTGTGGCTGCTA 57.714 40.909 0.00 0.00 0.00 3.49
5129 6574 3.146104 ACTCTACATTTTGTGGCTGCT 57.854 42.857 0.00 0.00 0.00 4.24
5130 6575 3.923017 AACTCTACATTTTGTGGCTGC 57.077 42.857 0.00 0.00 0.00 5.25
5131 6576 5.940192 TGTAACTCTACATTTTGTGGCTG 57.060 39.130 0.00 0.00 32.93 4.85
5132 6577 7.620880 TCTATGTAACTCTACATTTTGTGGCT 58.379 34.615 3.29 0.00 44.77 4.75
5133 6578 7.764443 TCTCTATGTAACTCTACATTTTGTGGC 59.236 37.037 3.29 0.00 44.77 5.01
5134 6579 9.653287 TTCTCTATGTAACTCTACATTTTGTGG 57.347 33.333 3.29 0.00 44.77 4.17
5151 6596 8.887717 CACTGCTTAGCTTAAATTTCTCTATGT 58.112 33.333 5.60 0.00 0.00 2.29
5152 6597 8.341173 CCACTGCTTAGCTTAAATTTCTCTATG 58.659 37.037 5.60 0.00 0.00 2.23
5153 6598 8.049721 ACCACTGCTTAGCTTAAATTTCTCTAT 58.950 33.333 5.60 0.00 0.00 1.98
5154 6599 7.394816 ACCACTGCTTAGCTTAAATTTCTCTA 58.605 34.615 5.60 0.00 0.00 2.43
5155 6600 6.241645 ACCACTGCTTAGCTTAAATTTCTCT 58.758 36.000 5.60 0.00 0.00 3.10
5156 6601 6.502136 ACCACTGCTTAGCTTAAATTTCTC 57.498 37.500 5.60 0.00 0.00 2.87
5157 6602 7.996098 TTACCACTGCTTAGCTTAAATTTCT 57.004 32.000 5.60 0.00 0.00 2.52
5161 6606 9.681062 TCTTAATTACCACTGCTTAGCTTAAAT 57.319 29.630 5.60 0.00 0.00 1.40
5162 6607 9.681062 ATCTTAATTACCACTGCTTAGCTTAAA 57.319 29.630 5.60 0.00 0.00 1.52
5163 6608 9.326413 GATCTTAATTACCACTGCTTAGCTTAA 57.674 33.333 5.60 0.00 0.00 1.85
5164 6609 7.931948 GGATCTTAATTACCACTGCTTAGCTTA 59.068 37.037 5.60 0.00 0.00 3.09
5167 6612 5.470437 GGGATCTTAATTACCACTGCTTAGC 59.530 44.000 0.00 0.00 0.00 3.09
5169 6614 5.454187 CGGGGATCTTAATTACCACTGCTTA 60.454 44.000 0.00 0.00 0.00 3.09
5173 6618 3.139077 GCGGGGATCTTAATTACCACTG 58.861 50.000 0.00 0.00 0.00 3.66
5176 6621 1.071071 CCGCGGGGATCTTAATTACCA 59.929 52.381 20.10 0.00 34.06 3.25
5177 6622 1.804601 CCGCGGGGATCTTAATTACC 58.195 55.000 20.10 0.00 34.06 2.85
5189 6634 0.179001 ATCCTTATTTTCCCGCGGGG 60.179 55.000 42.36 24.62 46.11 5.73
5190 6635 0.951558 CATCCTTATTTTCCCGCGGG 59.048 55.000 39.13 39.13 0.00 6.13
5191 6636 1.602377 GACATCCTTATTTTCCCGCGG 59.398 52.381 21.04 21.04 0.00 6.46
5193 6638 2.879026 GGAGACATCCTTATTTTCCCGC 59.121 50.000 0.00 0.00 42.94 6.13
5205 6650 2.381911 TGGGTAACGTAGGAGACATCC 58.618 52.381 0.00 0.00 42.05 3.51
5206 6651 4.369182 CAATGGGTAACGTAGGAGACATC 58.631 47.826 0.00 0.00 37.60 3.06
5208 6653 2.498481 CCAATGGGTAACGTAGGAGACA 59.502 50.000 0.00 0.00 37.60 3.41
5209 6654 2.762327 TCCAATGGGTAACGTAGGAGAC 59.238 50.000 0.00 0.00 34.93 3.36
5210 6655 3.104519 TCCAATGGGTAACGTAGGAGA 57.895 47.619 0.00 0.00 34.93 3.71
5211 6656 3.899052 TTCCAATGGGTAACGTAGGAG 57.101 47.619 0.00 0.00 34.93 3.69
5212 6657 4.519213 CAATTCCAATGGGTAACGTAGGA 58.481 43.478 0.00 0.00 34.93 2.94
5213 6658 3.066203 GCAATTCCAATGGGTAACGTAGG 59.934 47.826 0.00 0.00 34.93 3.18
5214 6659 3.692101 TGCAATTCCAATGGGTAACGTAG 59.308 43.478 0.00 0.00 34.93 3.51
5215 6660 3.440872 GTGCAATTCCAATGGGTAACGTA 59.559 43.478 0.00 0.00 34.93 3.57
5216 6661 2.230266 GTGCAATTCCAATGGGTAACGT 59.770 45.455 0.00 0.00 34.93 3.99
5217 6662 2.416701 GGTGCAATTCCAATGGGTAACG 60.417 50.000 0.00 0.00 34.93 3.18
5218 6663 2.093711 GGGTGCAATTCCAATGGGTAAC 60.094 50.000 0.00 0.00 34.93 2.50
5219 6664 2.183679 GGGTGCAATTCCAATGGGTAA 58.816 47.619 0.00 0.00 34.93 2.85
5220 6665 1.077828 TGGGTGCAATTCCAATGGGTA 59.922 47.619 0.00 0.00 34.93 3.69
5221 6666 0.178909 TGGGTGCAATTCCAATGGGT 60.179 50.000 0.00 0.00 34.93 4.51
5222 6667 0.982704 TTGGGTGCAATTCCAATGGG 59.017 50.000 11.85 0.00 38.04 4.00
5223 6668 2.855209 TTTGGGTGCAATTCCAATGG 57.145 45.000 15.32 0.00 41.96 3.16
5224 6669 3.677190 ACATTTGGGTGCAATTCCAATG 58.323 40.909 15.32 15.88 41.96 2.82
5225 6670 4.073549 CAACATTTGGGTGCAATTCCAAT 58.926 39.130 15.32 6.22 41.96 3.16
5226 6671 3.474600 CAACATTTGGGTGCAATTCCAA 58.525 40.909 11.85 11.85 40.85 3.53
5227 6672 3.123157 CAACATTTGGGTGCAATTCCA 57.877 42.857 0.00 0.00 0.00 3.53
5228 6673 4.806964 AATCCAACATTTGGGTGCAATTCC 60.807 41.667 5.12 0.00 45.46 3.01
5229 6674 4.325972 AATCCAACATTTGGGTGCAATTC 58.674 39.130 5.12 0.00 45.46 2.17
5230 6675 4.370094 AATCCAACATTTGGGTGCAATT 57.630 36.364 5.12 0.00 45.46 2.32
5231 6676 5.430007 CATAATCCAACATTTGGGTGCAAT 58.570 37.500 5.12 0.00 45.46 3.56
5232 6677 4.323333 CCATAATCCAACATTTGGGTGCAA 60.323 41.667 5.12 0.00 45.46 4.08
5233 6678 3.197333 CCATAATCCAACATTTGGGTGCA 59.803 43.478 5.12 0.00 45.46 4.57
5234 6679 3.450457 TCCATAATCCAACATTTGGGTGC 59.550 43.478 5.12 0.00 45.46 5.01
5235 6680 5.874897 ATCCATAATCCAACATTTGGGTG 57.125 39.130 5.12 0.76 45.46 4.61
5241 6686 8.362639 GCAATTCTGTATCCATAATCCAACATT 58.637 33.333 0.00 0.00 0.00 2.71
5242 6687 7.308770 CGCAATTCTGTATCCATAATCCAACAT 60.309 37.037 0.00 0.00 0.00 2.71
5243 6688 6.017192 CGCAATTCTGTATCCATAATCCAACA 60.017 38.462 0.00 0.00 0.00 3.33
5244 6689 6.204688 TCGCAATTCTGTATCCATAATCCAAC 59.795 38.462 0.00 0.00 0.00 3.77
5245 6690 6.295249 TCGCAATTCTGTATCCATAATCCAA 58.705 36.000 0.00 0.00 0.00 3.53
5246 6691 5.863965 TCGCAATTCTGTATCCATAATCCA 58.136 37.500 0.00 0.00 0.00 3.41
5247 6692 6.650807 TCTTCGCAATTCTGTATCCATAATCC 59.349 38.462 0.00 0.00 0.00 3.01
5248 6693 7.600375 TCTCTTCGCAATTCTGTATCCATAATC 59.400 37.037 0.00 0.00 0.00 1.75
5249 6694 7.445121 TCTCTTCGCAATTCTGTATCCATAAT 58.555 34.615 0.00 0.00 0.00 1.28
5250 6695 6.816136 TCTCTTCGCAATTCTGTATCCATAA 58.184 36.000 0.00 0.00 0.00 1.90
5251 6696 6.265422 TCTCTCTTCGCAATTCTGTATCCATA 59.735 38.462 0.00 0.00 0.00 2.74
5252 6697 5.069648 TCTCTCTTCGCAATTCTGTATCCAT 59.930 40.000 0.00 0.00 0.00 3.41
5253 6698 4.402474 TCTCTCTTCGCAATTCTGTATCCA 59.598 41.667 0.00 0.00 0.00 3.41
5254 6699 4.938080 TCTCTCTTCGCAATTCTGTATCC 58.062 43.478 0.00 0.00 0.00 2.59
5255 6700 5.826586 TCTCTCTCTTCGCAATTCTGTATC 58.173 41.667 0.00 0.00 0.00 2.24
5256 6701 5.592282 TCTCTCTCTCTTCGCAATTCTGTAT 59.408 40.000 0.00 0.00 0.00 2.29
5257 6702 4.944317 TCTCTCTCTCTTCGCAATTCTGTA 59.056 41.667 0.00 0.00 0.00 2.74
5258 6703 3.761218 TCTCTCTCTCTTCGCAATTCTGT 59.239 43.478 0.00 0.00 0.00 3.41
5259 6704 4.096231 TCTCTCTCTCTCTTCGCAATTCTG 59.904 45.833 0.00 0.00 0.00 3.02
5260 6705 4.269183 TCTCTCTCTCTCTTCGCAATTCT 58.731 43.478 0.00 0.00 0.00 2.40
5261 6706 4.335315 TCTCTCTCTCTCTCTTCGCAATTC 59.665 45.833 0.00 0.00 0.00 2.17
5262 6707 4.269183 TCTCTCTCTCTCTCTTCGCAATT 58.731 43.478 0.00 0.00 0.00 2.32
5263 6708 3.879295 CTCTCTCTCTCTCTCTTCGCAAT 59.121 47.826 0.00 0.00 0.00 3.56
5264 6709 3.055458 TCTCTCTCTCTCTCTCTTCGCAA 60.055 47.826 0.00 0.00 0.00 4.85
5265 6710 2.499693 TCTCTCTCTCTCTCTCTTCGCA 59.500 50.000 0.00 0.00 0.00 5.10
5266 6711 3.126831 CTCTCTCTCTCTCTCTCTTCGC 58.873 54.545 0.00 0.00 0.00 4.70
5267 6712 4.339530 TCTCTCTCTCTCTCTCTCTCTTCG 59.660 50.000 0.00 0.00 0.00 3.79
5268 6713 5.596361 TCTCTCTCTCTCTCTCTCTCTCTTC 59.404 48.000 0.00 0.00 0.00 2.87
5269 6714 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
5270 6715 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
5271 6716 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
5272 6717 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
5273 6718 3.551863 CGCTCTCTCTCTCTCTCTCTCTC 60.552 56.522 0.00 0.00 0.00 3.20
5274 6719 2.363680 CGCTCTCTCTCTCTCTCTCTCT 59.636 54.545 0.00 0.00 0.00 3.10
5275 6720 2.748605 CGCTCTCTCTCTCTCTCTCTC 58.251 57.143 0.00 0.00 0.00 3.20
5276 6721 1.202580 GCGCTCTCTCTCTCTCTCTCT 60.203 57.143 0.00 0.00 0.00 3.10
5277 6722 1.202580 AGCGCTCTCTCTCTCTCTCTC 60.203 57.143 2.64 0.00 0.00 3.20
5278 6723 0.833287 AGCGCTCTCTCTCTCTCTCT 59.167 55.000 2.64 0.00 0.00 3.10
5279 6724 1.221414 GAGCGCTCTCTCTCTCTCTC 58.779 60.000 29.88 0.00 36.42 3.20
5280 6725 0.530650 CGAGCGCTCTCTCTCTCTCT 60.531 60.000 32.88 0.00 37.19 3.10
5281 6726 1.498865 CCGAGCGCTCTCTCTCTCTC 61.499 65.000 32.88 5.86 37.19 3.20
5282 6727 1.523711 CCGAGCGCTCTCTCTCTCT 60.524 63.158 32.88 0.00 37.19 3.10
5283 6728 3.022287 CCGAGCGCTCTCTCTCTC 58.978 66.667 32.88 7.41 37.19 3.20
5284 6729 3.209097 GCCGAGCGCTCTCTCTCT 61.209 66.667 32.88 0.00 37.19 3.10
5293 6738 4.742201 TCTTGACCAGCCGAGCGC 62.742 66.667 0.00 0.00 37.98 5.92
5294 6739 2.048222 TTCTTGACCAGCCGAGCG 60.048 61.111 0.00 0.00 0.00 5.03
5295 6740 1.743252 CCTTCTTGACCAGCCGAGC 60.743 63.158 0.00 0.00 0.00 5.03
5296 6741 1.743252 GCCTTCTTGACCAGCCGAG 60.743 63.158 0.00 0.00 0.00 4.63
5297 6742 2.347490 GCCTTCTTGACCAGCCGA 59.653 61.111 0.00 0.00 0.00 5.54
5298 6743 2.032528 TGCCTTCTTGACCAGCCG 59.967 61.111 0.00 0.00 0.00 5.52
5299 6744 0.610232 ATGTGCCTTCTTGACCAGCC 60.610 55.000 0.00 0.00 0.00 4.85
5300 6745 1.200948 GAATGTGCCTTCTTGACCAGC 59.799 52.381 0.00 0.00 0.00 4.85
5301 6746 2.787994 AGAATGTGCCTTCTTGACCAG 58.212 47.619 0.00 0.00 31.38 4.00
5316 6761 2.159184 TGCGCCTTCTCTCTGTAGAATG 60.159 50.000 4.18 0.00 35.04 2.67
5325 6770 1.446966 GTGGAGTGCGCCTTCTCTC 60.447 63.158 18.63 12.28 0.00 3.20
5326 6771 2.164865 CTGTGGAGTGCGCCTTCTCT 62.165 60.000 18.63 5.40 0.00 3.10
5338 6783 2.419297 GCAGGGAACATACTCTGTGGAG 60.419 54.545 0.00 0.00 44.62 3.86
5341 6786 2.350522 GTGCAGGGAACATACTCTGTG 58.649 52.381 0.00 0.00 40.18 3.66
5348 6795 0.541392 AGATGCGTGCAGGGAACATA 59.459 50.000 4.28 0.00 0.00 2.29
5356 6803 3.200593 GCCTGGAGATGCGTGCAG 61.201 66.667 0.00 0.00 35.73 4.41
5376 6823 0.536460 TCCTTTCAGCGGTCCAAACC 60.536 55.000 0.00 0.00 42.66 3.27
5377 6824 1.266989 CTTCCTTTCAGCGGTCCAAAC 59.733 52.381 0.00 0.00 0.00 2.93
5394 6841 2.982470 CAGCTCGCCATTTTGTTTCTTC 59.018 45.455 0.00 0.00 0.00 2.87
5396 6843 2.227388 CTCAGCTCGCCATTTTGTTTCT 59.773 45.455 0.00 0.00 0.00 2.52
5397 6844 2.589014 CTCAGCTCGCCATTTTGTTTC 58.411 47.619 0.00 0.00 0.00 2.78
5405 6852 2.019984 GATTTTTCCTCAGCTCGCCAT 58.980 47.619 0.00 0.00 0.00 4.40
5406 6853 1.003580 AGATTTTTCCTCAGCTCGCCA 59.996 47.619 0.00 0.00 0.00 5.69
5407 6854 1.668237 GAGATTTTTCCTCAGCTCGCC 59.332 52.381 0.00 0.00 0.00 5.54
5408 6855 2.351111 CAGAGATTTTTCCTCAGCTCGC 59.649 50.000 0.00 0.00 33.25 5.03
5409 6856 3.854666 TCAGAGATTTTTCCTCAGCTCG 58.145 45.455 0.00 0.00 33.25 5.03
5411 6858 5.495926 TCTTCAGAGATTTTTCCTCAGCT 57.504 39.130 0.00 0.00 33.25 4.24
5439 6888 1.705186 GGGGATAGGCCAGCAGATTTA 59.295 52.381 5.01 0.00 38.95 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.