Multiple sequence alignment - TraesCS5A01G269500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G269500 chr5A 100.000 7427 0 0 1 7427 480282748 480290174 0.000000e+00 13716.0
1 TraesCS5A01G269500 chr5A 97.368 38 1 0 7018 7055 169798678 169798641 1.730000e-06 65.8
2 TraesCS5A01G269500 chr5D 92.840 4204 172 45 2645 6790 379790865 379794997 0.000000e+00 5976.0
3 TraesCS5A01G269500 chr5D 92.317 2538 120 42 111 2616 379788372 379790866 0.000000e+00 3537.0
4 TraesCS5A01G269500 chr5D 93.443 366 15 4 6745 7107 379794998 379795357 1.100000e-147 534.0
5 TraesCS5A01G269500 chr5D 89.130 92 10 0 1 92 379788290 379788381 1.690000e-21 115.0
6 TraesCS5A01G269500 chr5D 90.909 44 4 0 46 89 379788070 379788113 8.050000e-05 60.2
7 TraesCS5A01G269500 chr5B 94.042 3105 139 7 1983 5042 455734379 455737482 0.000000e+00 4667.0
8 TraesCS5A01G269500 chr5B 92.757 1988 100 28 111 2083 455732419 455734377 0.000000e+00 2833.0
9 TraesCS5A01G269500 chr5B 93.460 1835 83 17 5292 7107 455737773 455739589 0.000000e+00 2689.0
10 TraesCS5A01G269500 chr5B 95.652 92 4 0 5104 5195 455737630 455737721 1.670000e-31 148.0
11 TraesCS5A01G269500 chr5B 100.000 36 0 0 7017 7052 407043863 407043828 4.810000e-07 67.6
12 TraesCS5A01G269500 chr5B 80.000 90 18 0 3 92 455732339 455732428 4.810000e-07 67.6
13 TraesCS5A01G269500 chr7B 80.769 416 71 9 4140 4549 691177986 691178398 4.320000e-82 316.0
14 TraesCS5A01G269500 chr7B 92.398 171 11 2 7259 7427 484273570 484273740 7.440000e-60 243.0
15 TraesCS5A01G269500 chr7A 96.364 165 5 1 7264 7427 289172647 289172483 3.420000e-68 270.0
16 TraesCS5A01G269500 chr7A 96.226 106 4 0 7103 7208 645026165 645026060 2.750000e-39 174.0
17 TraesCS5A01G269500 chr7A 96.970 33 1 0 5690 5722 688883714 688883746 1.000000e-03 56.5
18 TraesCS5A01G269500 chr7A 100.000 28 0 0 5695 5722 688883725 688883752 1.300000e-02 52.8
19 TraesCS5A01G269500 chrUn 92.982 171 10 2 7259 7427 95231871 95231701 1.600000e-61 248.0
20 TraesCS5A01G269500 chr7D 93.023 172 8 4 7259 7427 596066853 596066683 1.600000e-61 248.0
21 TraesCS5A01G269500 chr7D 92.398 171 11 2 7259 7427 3184014 3183844 7.440000e-60 243.0
22 TraesCS5A01G269500 chr1D 92.398 171 11 2 7259 7427 136948196 136948366 7.440000e-60 243.0
23 TraesCS5A01G269500 chr1D 92.353 170 12 1 7259 7427 406667782 406667613 2.680000e-59 241.0
24 TraesCS5A01G269500 chr3A 91.228 171 13 2 7259 7427 562893853 562894023 1.610000e-56 231.0
25 TraesCS5A01G269500 chr3A 75.102 245 43 11 4056 4297 679479131 679478902 1.710000e-16 99.0
26 TraesCS5A01G269500 chr2B 90.643 171 14 2 7259 7427 707963209 707963039 7.500000e-55 226.0
27 TraesCS5A01G269500 chr2B 96.226 106 4 0 7103 7208 100347297 100347402 2.750000e-39 174.0
28 TraesCS5A01G269500 chr3B 96.330 109 4 0 7100 7208 173555325 173555433 5.920000e-41 180.0
29 TraesCS5A01G269500 chr3B 91.736 121 10 0 7096 7216 239889824 239889944 1.280000e-37 169.0
30 TraesCS5A01G269500 chr6B 95.413 109 5 0 7100 7208 149018650 149018758 2.750000e-39 174.0
31 TraesCS5A01G269500 chr1A 96.226 106 4 0 7103 7208 168552713 168552608 2.750000e-39 174.0
32 TraesCS5A01G269500 chr1A 93.860 114 7 0 7095 7208 119717411 119717298 9.910000e-39 172.0
33 TraesCS5A01G269500 chr2D 95.370 108 5 0 7101 7208 71577051 71576944 9.910000e-39 172.0
34 TraesCS5A01G269500 chr4B 93.805 113 7 0 7103 7215 171811927 171811815 3.560000e-38 171.0
35 TraesCS5A01G269500 chr3D 76.543 243 43 8 4056 4297 542800631 542800402 3.640000e-23 121.0
36 TraesCS5A01G269500 chr2A 100.000 28 0 0 5693 5720 42318847 42318874 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G269500 chr5A 480282748 480290174 7426 False 13716.00 13716 100.0000 1 7427 1 chr5A.!!$F1 7426
1 TraesCS5A01G269500 chr5D 379788070 379795357 7287 False 2044.44 5976 91.7278 1 7107 5 chr5D.!!$F1 7106
2 TraesCS5A01G269500 chr5B 455732339 455739589 7250 False 2080.92 4667 91.1822 3 7107 5 chr5B.!!$F1 7104


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 455 0.923358 ACCACCTCCTCACAAAACCA 59.077 50.000 0.0 0.0 0.00 3.67 F
1449 1772 0.534412 CTGGAGAGCTTGATGGTCGT 59.466 55.000 0.0 0.0 46.86 4.34 F
2610 3035 0.255890 AGGACGCACATTTAGCCCAT 59.744 50.000 0.0 0.0 0.00 4.00 F
3082 3537 0.834687 AGTTACACCCTCTTCCGCCA 60.835 55.000 0.0 0.0 0.00 5.69 F
3130 3585 0.877071 AGCTGGTGATGTTTCGCAAG 59.123 50.000 0.0 0.0 36.62 4.01 F
4895 5395 1.285078 GGTAAATCAGACAGCCCCCTT 59.715 52.381 0.0 0.0 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1861 2184 0.329261 CTCCCATCCTGCTCAACCAA 59.671 55.0 0.00 0.00 0.00 3.67 R
2632 3057 0.179045 AACTGCTCGTGCTTTCCAGT 60.179 50.0 11.19 2.38 40.48 4.00 R
4550 5007 0.038526 CTCGTAGGCCTGTTGACGTT 60.039 55.0 21.84 0.00 36.69 3.99 R
4958 5458 0.312102 GTTGACCAGCTCAAGCAACC 59.688 55.0 4.59 0.00 45.16 3.77 R
4959 5459 1.312815 AGTTGACCAGCTCAAGCAAC 58.687 50.0 4.59 9.17 45.16 4.17 R
6549 7164 0.538584 CATGTCTAGCCAGAGCACCA 59.461 55.0 0.00 0.00 43.56 4.17 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 356 1.150827 GCGCTTAACCAACGGTAGTT 58.849 50.000 0.00 0.00 42.15 2.24
93 357 1.127397 GCGCTTAACCAACGGTAGTTC 59.873 52.381 0.00 0.00 38.79 3.01
94 358 2.680577 CGCTTAACCAACGGTAGTTCT 58.319 47.619 0.00 0.00 38.79 3.01
95 359 3.062042 CGCTTAACCAACGGTAGTTCTT 58.938 45.455 0.00 0.00 38.79 2.52
97 361 4.609783 CGCTTAACCAACGGTAGTTCTTTG 60.610 45.833 0.00 0.00 38.79 2.77
98 362 4.779987 CTTAACCAACGGTAGTTCTTTGC 58.220 43.478 0.00 0.00 38.79 3.68
99 363 2.335316 ACCAACGGTAGTTCTTTGCA 57.665 45.000 0.00 0.00 38.79 4.08
100 364 2.645802 ACCAACGGTAGTTCTTTGCAA 58.354 42.857 0.00 0.00 38.79 4.08
101 365 3.018149 ACCAACGGTAGTTCTTTGCAAA 58.982 40.909 12.14 12.14 38.79 3.68
102 366 3.444388 ACCAACGGTAGTTCTTTGCAAAA 59.556 39.130 13.84 1.75 38.79 2.44
103 367 4.082136 ACCAACGGTAGTTCTTTGCAAAAA 60.082 37.500 13.84 7.86 38.79 1.94
126 390 4.921470 AACAACAACAGTAATCGGATCG 57.079 40.909 0.00 0.00 0.00 3.69
188 455 0.923358 ACCACCTCCTCACAAAACCA 59.077 50.000 0.00 0.00 0.00 3.67
192 459 3.497763 CCACCTCCTCACAAAACCATACA 60.498 47.826 0.00 0.00 0.00 2.29
193 460 3.502211 CACCTCCTCACAAAACCATACAC 59.498 47.826 0.00 0.00 0.00 2.90
201 468 3.888930 CACAAAACCATACACCTCCTTGT 59.111 43.478 0.00 0.00 0.00 3.16
204 471 6.882140 CACAAAACCATACACCTCCTTGTATA 59.118 38.462 0.00 0.00 40.11 1.47
205 472 6.882678 ACAAAACCATACACCTCCTTGTATAC 59.117 38.462 0.00 0.00 40.11 1.47
256 528 4.455877 GCAACACAATTACAAGTAGGCTCT 59.544 41.667 0.00 0.00 0.00 4.09
300 573 5.692115 TCACATTTATGCAAGGAGACCTA 57.308 39.130 0.00 0.00 31.13 3.08
301 574 6.252599 TCACATTTATGCAAGGAGACCTAT 57.747 37.500 0.00 0.00 31.13 2.57
315 588 2.494870 AGACCTATCCGCAAGTTTACGT 59.505 45.455 0.00 0.00 0.00 3.57
316 589 3.696051 AGACCTATCCGCAAGTTTACGTA 59.304 43.478 0.00 0.00 0.00 3.57
527 836 3.292656 CGCAGGAAGAGAGGCAGA 58.707 61.111 0.00 0.00 0.00 4.26
528 837 1.141449 CGCAGGAAGAGAGGCAGAG 59.859 63.158 0.00 0.00 0.00 3.35
529 838 1.521616 GCAGGAAGAGAGGCAGAGG 59.478 63.158 0.00 0.00 0.00 3.69
530 839 1.264045 GCAGGAAGAGAGGCAGAGGT 61.264 60.000 0.00 0.00 0.00 3.85
531 840 1.962402 GCAGGAAGAGAGGCAGAGGTA 60.962 57.143 0.00 0.00 0.00 3.08
532 841 2.031120 CAGGAAGAGAGGCAGAGGTAG 58.969 57.143 0.00 0.00 0.00 3.18
533 842 1.926665 AGGAAGAGAGGCAGAGGTAGA 59.073 52.381 0.00 0.00 0.00 2.59
534 843 2.091885 AGGAAGAGAGGCAGAGGTAGAG 60.092 54.545 0.00 0.00 0.00 2.43
535 844 2.092103 GGAAGAGAGGCAGAGGTAGAGA 60.092 54.545 0.00 0.00 0.00 3.10
536 845 3.214328 GAAGAGAGGCAGAGGTAGAGAG 58.786 54.545 0.00 0.00 0.00 3.20
537 846 2.487775 AGAGAGGCAGAGGTAGAGAGA 58.512 52.381 0.00 0.00 0.00 3.10
538 847 2.439507 AGAGAGGCAGAGGTAGAGAGAG 59.560 54.545 0.00 0.00 0.00 3.20
561 870 1.029408 TCTGAGCAGGAGAGTCGAGC 61.029 60.000 0.00 0.00 0.00 5.03
594 913 2.131067 ACGCCAAAACCCAACCCAG 61.131 57.895 0.00 0.00 0.00 4.45
595 914 1.830408 CGCCAAAACCCAACCCAGA 60.830 57.895 0.00 0.00 0.00 3.86
596 915 1.805428 CGCCAAAACCCAACCCAGAG 61.805 60.000 0.00 0.00 0.00 3.35
597 916 2.049435 CCAAAACCCAACCCAGAGC 58.951 57.895 0.00 0.00 0.00 4.09
598 917 1.659794 CAAAACCCAACCCAGAGCG 59.340 57.895 0.00 0.00 0.00 5.03
599 918 2.200337 AAAACCCAACCCAGAGCGC 61.200 57.895 0.00 0.00 0.00 5.92
600 919 2.920076 AAAACCCAACCCAGAGCGCA 62.920 55.000 11.47 0.00 0.00 6.09
601 920 4.643387 ACCCAACCCAGAGCGCAC 62.643 66.667 11.47 2.25 0.00 5.34
602 921 4.641645 CCCAACCCAGAGCGCACA 62.642 66.667 11.47 0.00 0.00 4.57
606 925 2.186826 AACCCAGAGCGCACAACAC 61.187 57.895 11.47 0.00 0.00 3.32
670 989 1.787057 GACAGATCCGTCTCGCCGAT 61.787 60.000 1.61 0.00 32.92 4.18
719 1038 2.693896 ATATCGCTCGTCCCGTCCCT 62.694 60.000 0.00 0.00 0.00 4.20
841 1163 5.078153 TCTGTTTCGTTTTCGTCAATCTG 57.922 39.130 0.00 0.00 44.46 2.90
843 1165 4.583426 TGTTTCGTTTTCGTCAATCTGTG 58.417 39.130 0.00 0.00 44.46 3.66
851 1173 0.936600 CGTCAATCTGTGTGTGTGCA 59.063 50.000 0.00 0.00 0.00 4.57
857 1179 2.547299 TCTGTGTGTGTGCATGATGA 57.453 45.000 0.00 0.00 0.00 2.92
1286 1609 3.338250 TGGGGAATTGGCCGCTCT 61.338 61.111 0.00 0.00 41.16 4.09
1403 1726 2.283145 AGCCACAATTCTGAAGCTGT 57.717 45.000 0.90 1.96 34.56 4.40
1404 1727 2.157738 AGCCACAATTCTGAAGCTGTC 58.842 47.619 5.26 0.00 34.56 3.51
1406 1729 2.787994 CCACAATTCTGAAGCTGTCCT 58.212 47.619 5.26 0.00 0.00 3.85
1448 1771 0.809241 GCTGGAGAGCTTGATGGTCG 60.809 60.000 0.00 0.00 46.86 4.79
1449 1772 0.534412 CTGGAGAGCTTGATGGTCGT 59.466 55.000 0.00 0.00 46.86 4.34
1545 1868 4.574013 GTGCTTAATGTCAAGGATGGAGAG 59.426 45.833 0.00 0.00 0.00 3.20
1638 1961 4.383552 GCAGAGTCCAGTGGTTCAGATAAT 60.384 45.833 9.54 0.00 0.00 1.28
1663 1986 2.038426 CCCACACATGTTGAGTCTGGTA 59.962 50.000 0.00 0.00 0.00 3.25
1671 1994 4.431416 TGTTGAGTCTGGTACCATTGTT 57.569 40.909 16.75 1.26 0.00 2.83
1673 1996 4.819630 TGTTGAGTCTGGTACCATTGTTTC 59.180 41.667 16.75 9.67 0.00 2.78
1744 2067 2.435805 GAGATCATGGAGCCAGGTACAA 59.564 50.000 0.73 0.00 0.00 2.41
1846 2169 1.927487 TGAGGGCAAACATGAGCATT 58.073 45.000 0.00 0.00 0.00 3.56
1861 2184 1.805869 GCATTCTGCAGTCACAGAGT 58.194 50.000 14.67 0.00 46.85 3.24
1866 2189 1.486310 TCTGCAGTCACAGAGTTGGTT 59.514 47.619 14.67 0.00 41.72 3.67
1901 2224 1.250154 AACGGGCATGACCATGTTGG 61.250 55.000 20.22 1.75 45.02 3.77
1981 2304 1.071605 GCAAGTAGAAGCACTGACGG 58.928 55.000 0.00 0.00 0.00 4.79
2030 2455 3.746045 TTGTGAAGCGACTTCTAAGGT 57.254 42.857 16.76 0.00 40.73 3.50
2067 2492 3.124686 GTTGCAAACGGGCTTGGA 58.875 55.556 0.00 0.00 36.92 3.53
2122 2547 1.178276 TGAGGGAGAGAGCGAAGTTC 58.822 55.000 0.00 0.00 38.31 3.01
2145 2570 1.134220 TCTGGTGTGGTTGAAGTGGAC 60.134 52.381 0.00 0.00 0.00 4.02
2148 2573 1.658994 GTGTGGTTGAAGTGGACGAA 58.341 50.000 0.00 0.00 0.00 3.85
2196 2621 2.238942 TGCATGATGGTCATACGGTC 57.761 50.000 0.00 0.00 34.28 4.79
2232 2657 0.472471 ACGAGGAAGCAAAACCTCCA 59.528 50.000 0.00 0.00 46.87 3.86
2345 2770 4.081752 GGATGATGTCTCTTCTGTCACACT 60.082 45.833 0.00 0.00 0.00 3.55
2366 2791 7.439356 CACACTTCAGTCAGTAAATTCAGAAGA 59.561 37.037 0.00 0.00 36.15 2.87
2370 2795 7.487822 TCAGTCAGTAAATTCAGAAGATCCT 57.512 36.000 0.00 0.00 0.00 3.24
2529 2954 2.289945 GGCATCTGAAGACAGGAGTGTT 60.290 50.000 0.00 0.00 43.60 3.32
2533 2958 2.365617 TCTGAAGACAGGAGTGTTCCAC 59.634 50.000 3.52 0.00 44.86 4.02
2610 3035 0.255890 AGGACGCACATTTAGCCCAT 59.744 50.000 0.00 0.00 0.00 4.00
2614 3039 3.304659 GGACGCACATTTAGCCCATAATG 60.305 47.826 0.00 0.00 37.67 1.90
2615 3040 3.550820 ACGCACATTTAGCCCATAATGA 58.449 40.909 0.00 0.00 36.03 2.57
2616 3041 3.315191 ACGCACATTTAGCCCATAATGAC 59.685 43.478 0.00 0.00 36.03 3.06
2617 3042 3.565482 CGCACATTTAGCCCATAATGACT 59.435 43.478 0.00 0.00 36.03 3.41
2618 3043 4.754618 CGCACATTTAGCCCATAATGACTA 59.245 41.667 0.00 0.00 36.03 2.59
2619 3044 5.412594 CGCACATTTAGCCCATAATGACTAT 59.587 40.000 0.00 0.00 36.03 2.12
2620 3045 6.072508 CGCACATTTAGCCCATAATGACTATT 60.073 38.462 0.00 0.00 36.03 1.73
2621 3046 7.308435 GCACATTTAGCCCATAATGACTATTC 58.692 38.462 0.00 0.00 36.03 1.75
2622 3047 7.175641 GCACATTTAGCCCATAATGACTATTCT 59.824 37.037 0.00 0.00 36.03 2.40
2623 3048 9.071276 CACATTTAGCCCATAATGACTATTCTT 57.929 33.333 0.00 0.00 36.03 2.52
2624 3049 9.289782 ACATTTAGCCCATAATGACTATTCTTC 57.710 33.333 0.00 0.00 36.03 2.87
2625 3050 9.512588 CATTTAGCCCATAATGACTATTCTTCT 57.487 33.333 0.00 0.00 34.44 2.85
2626 3051 8.908786 TTTAGCCCATAATGACTATTCTTCTG 57.091 34.615 0.00 0.00 0.00 3.02
2627 3052 6.753913 AGCCCATAATGACTATTCTTCTGA 57.246 37.500 0.00 0.00 0.00 3.27
2628 3053 7.141758 AGCCCATAATGACTATTCTTCTGAA 57.858 36.000 0.00 0.00 36.54 3.02
2629 3054 6.995091 AGCCCATAATGACTATTCTTCTGAAC 59.005 38.462 0.00 0.00 34.71 3.18
2630 3055 6.767902 GCCCATAATGACTATTCTTCTGAACA 59.232 38.462 0.00 0.00 34.71 3.18
2631 3056 7.041508 GCCCATAATGACTATTCTTCTGAACAG 60.042 40.741 0.00 0.00 34.71 3.16
2632 3057 8.206867 CCCATAATGACTATTCTTCTGAACAGA 58.793 37.037 0.00 0.00 34.71 3.41
2633 3058 9.039870 CCATAATGACTATTCTTCTGAACAGAC 57.960 37.037 3.88 0.00 37.14 3.51
2634 3059 9.814899 CATAATGACTATTCTTCTGAACAGACT 57.185 33.333 3.88 0.00 37.14 3.24
2635 3060 9.814899 ATAATGACTATTCTTCTGAACAGACTG 57.185 33.333 0.00 0.00 37.14 3.51
2636 3061 6.030548 TGACTATTCTTCTGAACAGACTGG 57.969 41.667 7.51 0.00 37.14 4.00
2637 3062 5.775195 TGACTATTCTTCTGAACAGACTGGA 59.225 40.000 7.51 1.57 37.14 3.86
2638 3063 6.267699 TGACTATTCTTCTGAACAGACTGGAA 59.732 38.462 7.51 9.39 37.14 3.53
2639 3064 7.067496 ACTATTCTTCTGAACAGACTGGAAA 57.933 36.000 7.51 0.00 37.14 3.13
2640 3065 7.158021 ACTATTCTTCTGAACAGACTGGAAAG 58.842 38.462 7.51 1.02 37.14 2.62
2641 3066 3.733337 TCTTCTGAACAGACTGGAAAGC 58.267 45.455 7.51 0.00 37.14 3.51
2642 3067 3.134623 TCTTCTGAACAGACTGGAAAGCA 59.865 43.478 7.51 0.00 37.14 3.91
2643 3068 2.838736 TCTGAACAGACTGGAAAGCAC 58.161 47.619 7.51 0.00 31.41 4.40
2704 3159 5.733091 GCTGTTAAAAGTGACAATGCTGTGA 60.733 40.000 0.00 0.00 35.30 3.58
2706 3161 6.804677 TGTTAAAAGTGACAATGCTGTGATT 58.195 32.000 0.00 0.00 35.30 2.57
2745 3200 5.511386 AAGAGATGGAGGTTGTTGAAGAT 57.489 39.130 0.00 0.00 0.00 2.40
2750 3205 3.897239 TGGAGGTTGTTGAAGATGTTGT 58.103 40.909 0.00 0.00 0.00 3.32
2807 3262 2.827921 AGCCAAGGTCCATTGATTTCAC 59.172 45.455 0.00 0.00 31.55 3.18
2814 3269 7.069085 CCAAGGTCCATTGATTTCACTGATAAT 59.931 37.037 0.00 0.00 31.55 1.28
2815 3270 7.578310 AGGTCCATTGATTTCACTGATAATG 57.422 36.000 0.00 0.00 0.00 1.90
2874 3329 2.005451 CATGTACAAGCAGAGGAGTGC 58.995 52.381 0.00 0.00 44.35 4.40
2899 3354 7.040892 GCAATTCTGATGAAATATCTAGCACCA 60.041 37.037 0.00 0.00 35.63 4.17
2905 3360 5.675684 TGAAATATCTAGCACCACTGTCA 57.324 39.130 0.00 0.00 0.00 3.58
2984 3439 6.208402 GCTGAACTCAGATATGATACAGGAGA 59.792 42.308 10.95 0.00 46.59 3.71
3032 3487 1.881973 TGAAGGTGAAGCTGTTGCATC 59.118 47.619 0.00 0.00 42.74 3.91
3068 3523 7.659652 AAGCTTCTGTTGTAGATGAAGTTAC 57.340 36.000 0.00 0.00 38.41 2.50
3078 3533 4.828072 AGATGAAGTTACACCCTCTTCC 57.172 45.455 0.00 0.00 37.39 3.46
3082 3537 0.834687 AGTTACACCCTCTTCCGCCA 60.835 55.000 0.00 0.00 0.00 5.69
3106 3561 4.008330 AGGAAGTGAATCTGATGTTGCTG 58.992 43.478 0.00 0.00 0.00 4.41
3107 3562 3.128242 GGAAGTGAATCTGATGTTGCTGG 59.872 47.826 0.00 0.00 0.00 4.85
3130 3585 0.877071 AGCTGGTGATGTTTCGCAAG 59.123 50.000 0.00 0.00 36.62 4.01
3183 3638 4.144297 GCCAATCTAATAATGACCAGCCA 58.856 43.478 0.00 0.00 0.00 4.75
3234 3689 5.182950 TGAAGAGCTAGTTTCTCTGACTGAG 59.817 44.000 3.04 3.04 40.51 3.35
3260 3715 1.533625 TGCCTGCCAGTTGTTACATC 58.466 50.000 0.00 0.00 0.00 3.06
3288 3743 2.388310 GAGTTAAGGCTCCTCACACC 57.612 55.000 0.00 0.00 0.00 4.16
3300 3755 2.279851 CACACCGACAAGGCGACA 60.280 61.111 0.00 0.00 46.52 4.35
3302 3757 2.738521 CACCGACAAGGCGACAGG 60.739 66.667 0.00 0.00 46.52 4.00
3396 3851 3.438360 CAAATCTTTGGAAGGTATGCGC 58.562 45.455 0.00 0.00 34.59 6.09
3404 3859 6.600032 TCTTTGGAAGGTATGCGCTATTTTTA 59.400 34.615 9.73 0.00 0.00 1.52
3416 3871 6.674066 TGCGCTATTTTTATTTGGCTATACC 58.326 36.000 9.73 0.00 39.84 2.73
3417 3872 6.488683 TGCGCTATTTTTATTTGGCTATACCT 59.511 34.615 9.73 0.00 40.22 3.08
3418 3873 7.013846 TGCGCTATTTTTATTTGGCTATACCTT 59.986 33.333 9.73 0.00 40.22 3.50
3461 3916 1.981256 TTCTCCTTGAAGTTGGTGCC 58.019 50.000 0.00 0.00 0.00 5.01
3536 3992 4.647564 AGTGGAACCTTCATCTGTTGAT 57.352 40.909 0.00 0.00 37.80 2.57
3635 4091 1.891919 GTCGCCTGTTGAACAGCCA 60.892 57.895 19.45 2.63 44.63 4.75
3641 4097 1.605710 CCTGTTGAACAGCCAGTTGAG 59.394 52.381 19.45 0.00 44.63 3.02
3676 4132 6.662755 ACAAGGGAAATATACAGCTCATGAA 58.337 36.000 0.00 0.00 0.00 2.57
3736 4192 1.442526 GGCGATGATGTCTGGGCAAG 61.443 60.000 0.00 0.00 0.00 4.01
3758 4214 3.437049 GGGTACAAGATGCTCAAGTTCAC 59.563 47.826 0.00 0.00 0.00 3.18
3861 4317 2.041216 TCCCCTTTTCCTTCCTTAGCAC 59.959 50.000 0.00 0.00 0.00 4.40
3873 4329 3.650139 TCCTTAGCACGTTTCTGACTTC 58.350 45.455 0.00 0.00 0.00 3.01
3925 4381 6.605995 TGATGAGTATCGGGAAAAGTTAGAGA 59.394 38.462 0.00 0.00 38.61 3.10
3944 4400 2.365617 AGACAGCACGGAAAGAAGAGAA 59.634 45.455 0.00 0.00 0.00 2.87
3956 4412 4.799564 AAGAAGAGAATGAAGCGAGAGT 57.200 40.909 0.00 0.00 0.00 3.24
3966 4422 1.580845 AAGCGAGAGTTGCACATGCC 61.581 55.000 0.49 0.00 41.18 4.40
3984 4440 1.406887 GCCGGCAAGAGGAATGTTCTA 60.407 52.381 24.80 0.00 0.00 2.10
4055 4511 8.912988 AGTTGAAGAAATTGATGAGTTGGTAAA 58.087 29.630 0.00 0.00 0.00 2.01
4311 4767 4.219288 AGTGAAGCATTCCATCAAAAGGAC 59.781 41.667 0.00 0.00 46.93 3.85
4349 4805 8.197439 GCAACATAAGGTATTTTCTTAAGCCAT 58.803 33.333 0.00 0.00 31.49 4.40
4350 4806 9.520204 CAACATAAGGTATTTTCTTAAGCCATG 57.480 33.333 0.00 0.00 31.49 3.66
4369 4825 4.386652 CCATGCCTTGTTCTTTTCAATTCG 59.613 41.667 0.00 0.00 0.00 3.34
4370 4826 3.380142 TGCCTTGTTCTTTTCAATTCGC 58.620 40.909 0.00 0.00 0.00 4.70
4412 4869 6.948886 ACTGACCTATGTTGTCTTCTCTAGAA 59.051 38.462 0.00 0.00 33.81 2.10
4446 4903 8.648557 AGGAAGCAGATTTACTTTTCAAAAAC 57.351 30.769 0.00 0.00 0.00 2.43
4550 5007 3.156293 ACTTGTATGCTGCCAATGAACA 58.844 40.909 0.00 0.00 0.00 3.18
4608 5065 1.681076 GGAACCGGGCAAGAAGGTA 59.319 57.895 6.32 0.00 37.26 3.08
4646 5114 6.856895 AGGCTTTCTGTAGTGCAATATTTTC 58.143 36.000 0.00 0.00 0.00 2.29
4668 5136 9.809096 TTTTCATGCTAAATAAACAAGTCAACA 57.191 25.926 0.00 0.00 0.00 3.33
4669 5137 9.979578 TTTCATGCTAAATAAACAAGTCAACAT 57.020 25.926 0.00 0.00 0.00 2.71
4705 5205 6.639563 TGTGCTAGTGACTAATAATGCAGAA 58.360 36.000 4.04 0.00 0.00 3.02
4733 5233 4.883083 TCTGTAGTGTTTCTGGTTAGCTG 58.117 43.478 0.00 0.00 0.00 4.24
4773 5273 4.404394 TCCTTGTCTATATCTTTGGCACGA 59.596 41.667 0.00 0.00 0.00 4.35
4809 5309 3.576982 TCTTCATGTACAAGAAGGACCGT 59.423 43.478 30.34 0.00 41.16 4.83
4845 5345 4.511527 AGCTCTTATCAAGTGGTGACATG 58.488 43.478 0.00 0.00 46.14 3.21
4895 5395 1.285078 GGTAAATCAGACAGCCCCCTT 59.715 52.381 0.00 0.00 0.00 3.95
4913 5413 6.711194 GCCCCCTTTCTGTTATTATCTTAGTC 59.289 42.308 0.00 0.00 0.00 2.59
4955 5455 3.467374 TTTGGCCTTGGTTTTGATGTC 57.533 42.857 3.32 0.00 0.00 3.06
4958 5458 1.200020 GGCCTTGGTTTTGATGTCTCG 59.800 52.381 0.00 0.00 0.00 4.04
4959 5459 1.200020 GCCTTGGTTTTGATGTCTCGG 59.800 52.381 0.00 0.00 0.00 4.63
4983 5483 3.077359 GCTTGAGCTGGTCAACTTACAT 58.923 45.455 17.52 0.00 40.45 2.29
5028 5528 6.878923 CCAACAGAACAGATACAATCCACTAA 59.121 38.462 0.00 0.00 0.00 2.24
5042 5542 8.086851 ACAATCCACTAACATTTGCAATTTTC 57.913 30.769 0.00 0.00 0.00 2.29
5043 5543 7.933033 ACAATCCACTAACATTTGCAATTTTCT 59.067 29.630 0.00 0.00 0.00 2.52
5044 5544 8.776470 CAATCCACTAACATTTGCAATTTTCTT 58.224 29.630 0.00 0.00 0.00 2.52
5045 5545 8.907222 ATCCACTAACATTTGCAATTTTCTTT 57.093 26.923 0.00 0.00 0.00 2.52
5074 5574 1.219646 CAAAACATGGGTTGCAGTGC 58.780 50.000 8.58 8.58 37.30 4.40
5075 5575 1.122227 AAAACATGGGTTGCAGTGCT 58.878 45.000 17.60 0.00 37.30 4.40
5088 5686 5.934625 GGTTGCAGTGCTAGTGCTATAATAT 59.065 40.000 17.60 0.00 44.61 1.28
5123 5731 4.035112 ACGGGTTATGATCTACCTTTGGA 58.965 43.478 10.63 0.00 34.75 3.53
5195 5803 3.829601 CCCTCCTATGACTGATCAGTACC 59.170 52.174 27.95 16.95 42.66 3.34
5196 5804 4.474394 CCTCCTATGACTGATCAGTACCA 58.526 47.826 27.95 21.85 42.66 3.25
5197 5805 4.895889 CCTCCTATGACTGATCAGTACCAA 59.104 45.833 27.95 14.30 42.66 3.67
5198 5806 5.221342 CCTCCTATGACTGATCAGTACCAAC 60.221 48.000 27.95 15.51 42.66 3.77
5199 5807 5.269189 TCCTATGACTGATCAGTACCAACA 58.731 41.667 27.95 20.44 42.66 3.33
5200 5808 5.899547 TCCTATGACTGATCAGTACCAACAT 59.100 40.000 27.95 24.96 42.66 2.71
5201 5809 6.040955 TCCTATGACTGATCAGTACCAACATC 59.959 42.308 27.95 13.39 42.66 3.06
5202 5810 4.471904 TGACTGATCAGTACCAACATCC 57.528 45.455 27.95 12.70 42.66 3.51
5203 5811 4.096681 TGACTGATCAGTACCAACATCCT 58.903 43.478 27.95 0.71 42.66 3.24
5204 5812 4.160439 TGACTGATCAGTACCAACATCCTC 59.840 45.833 27.95 11.50 42.66 3.71
5205 5813 4.096681 ACTGATCAGTACCAACATCCTCA 58.903 43.478 26.87 0.00 40.43 3.86
5206 5814 4.718774 ACTGATCAGTACCAACATCCTCAT 59.281 41.667 26.87 0.00 40.43 2.90
5207 5815 5.190528 ACTGATCAGTACCAACATCCTCATT 59.809 40.000 26.87 0.00 40.43 2.57
5208 5816 6.384015 ACTGATCAGTACCAACATCCTCATTA 59.616 38.462 26.87 0.00 40.43 1.90
5209 5817 6.582636 TGATCAGTACCAACATCCTCATTAC 58.417 40.000 0.00 0.00 0.00 1.89
5210 5818 6.384015 TGATCAGTACCAACATCCTCATTACT 59.616 38.462 0.00 0.00 0.00 2.24
5211 5819 6.222038 TCAGTACCAACATCCTCATTACTC 57.778 41.667 0.00 0.00 0.00 2.59
5212 5820 5.719563 TCAGTACCAACATCCTCATTACTCA 59.280 40.000 0.00 0.00 0.00 3.41
5213 5821 6.384015 TCAGTACCAACATCCTCATTACTCAT 59.616 38.462 0.00 0.00 0.00 2.90
5214 5822 7.050377 CAGTACCAACATCCTCATTACTCATT 58.950 38.462 0.00 0.00 0.00 2.57
5215 5823 7.554118 CAGTACCAACATCCTCATTACTCATTT 59.446 37.037 0.00 0.00 0.00 2.32
5216 5824 7.770897 AGTACCAACATCCTCATTACTCATTTC 59.229 37.037 0.00 0.00 0.00 2.17
5217 5825 6.725364 ACCAACATCCTCATTACTCATTTCT 58.275 36.000 0.00 0.00 0.00 2.52
5218 5826 7.177878 ACCAACATCCTCATTACTCATTTCTT 58.822 34.615 0.00 0.00 0.00 2.52
5219 5827 8.328758 ACCAACATCCTCATTACTCATTTCTTA 58.671 33.333 0.00 0.00 0.00 2.10
5220 5828 9.347240 CCAACATCCTCATTACTCATTTCTTAT 57.653 33.333 0.00 0.00 0.00 1.73
5222 5830 8.388484 ACATCCTCATTACTCATTTCTTATGC 57.612 34.615 0.00 0.00 0.00 3.14
5223 5831 8.216423 ACATCCTCATTACTCATTTCTTATGCT 58.784 33.333 0.00 0.00 0.00 3.79
5224 5832 8.719648 CATCCTCATTACTCATTTCTTATGCTC 58.280 37.037 0.00 0.00 0.00 4.26
5225 5833 8.027524 TCCTCATTACTCATTTCTTATGCTCT 57.972 34.615 0.00 0.00 0.00 4.09
5226 5834 8.489489 TCCTCATTACTCATTTCTTATGCTCTT 58.511 33.333 0.00 0.00 0.00 2.85
5408 6021 6.714810 TGTATGTTGAAGCAAACCAGATTAGT 59.285 34.615 0.00 0.00 0.00 2.24
5540 6153 1.134175 ACTGTTTCAAGCCCAAACGTG 59.866 47.619 0.00 0.00 36.66 4.49
5553 6166 2.035321 CCAAACGTGCCCATTACAACTT 59.965 45.455 0.00 0.00 0.00 2.66
5554 6167 3.305110 CAAACGTGCCCATTACAACTTC 58.695 45.455 0.00 0.00 0.00 3.01
5558 6171 2.416547 CGTGCCCATTACAACTTCAGAG 59.583 50.000 0.00 0.00 0.00 3.35
5612 6225 4.100344 GTCCCTGTAGAAGAGGATTCCTTC 59.900 50.000 6.68 1.26 40.10 3.46
5636 6249 2.242708 TGTTTTACCACCAACCCAGACT 59.757 45.455 0.00 0.00 0.00 3.24
5648 6261 0.835941 CCCAGACTCATAAGCAGGCT 59.164 55.000 0.00 0.00 0.00 4.58
5676 6289 0.250727 GGCAGCTGGTAGTGGTTCAA 60.251 55.000 17.12 0.00 0.00 2.69
5738 6351 5.105146 AGCTCCAGAAGTGGTAGATGTAAAG 60.105 44.000 0.00 0.00 45.28 1.85
5909 6522 3.008923 AGGAGGCTGAGGAAAGAAAGAAG 59.991 47.826 0.00 0.00 0.00 2.85
5921 6534 5.532779 GGAAAGAAAGAAGAAGAAGGCAGAA 59.467 40.000 0.00 0.00 0.00 3.02
5951 6564 0.467290 AAAGGGCGGAGTTCAAAGCA 60.467 50.000 0.00 0.00 0.00 3.91
6020 6634 4.194640 TGCCTTCATGTTAGAGCTCATTC 58.805 43.478 17.77 5.82 0.00 2.67
6028 6642 5.745312 TGTTAGAGCTCATTCCTTCTTGA 57.255 39.130 17.77 0.00 0.00 3.02
6031 6645 8.027524 TGTTAGAGCTCATTCCTTCTTGATAT 57.972 34.615 17.77 0.00 0.00 1.63
6034 6648 7.854166 AGAGCTCATTCCTTCTTGATATACT 57.146 36.000 17.77 0.00 0.00 2.12
6035 6649 7.669427 AGAGCTCATTCCTTCTTGATATACTG 58.331 38.462 17.77 0.00 0.00 2.74
6082 6697 9.976511 ATTAATTCTCATCCTATTGCAAACATG 57.023 29.630 1.71 3.66 0.00 3.21
6131 6746 1.600636 TTGGCACTACACCAGCAGC 60.601 57.895 0.00 0.00 38.73 5.25
6135 6750 1.580845 GCACTACACCAGCAGCCTTG 61.581 60.000 0.00 0.00 0.00 3.61
6136 6751 0.035317 CACTACACCAGCAGCCTTGA 59.965 55.000 0.00 0.00 0.00 3.02
6193 6808 2.159393 GCAGACACTGAAAGCAACACAA 60.159 45.455 2.81 0.00 37.60 3.33
6198 6813 3.696051 ACACTGAAAGCAACACAACTGAT 59.304 39.130 0.00 0.00 37.60 2.90
6208 6823 7.182817 AGCAACACAACTGATAATACTAGGA 57.817 36.000 0.00 0.00 0.00 2.94
6549 7164 3.603158 AGTTGTTTTGCGGGAAACTTT 57.397 38.095 10.28 0.00 39.62 2.66
6598 7213 3.840890 TTATGTTTGAACCGTGGATGC 57.159 42.857 0.00 0.00 0.00 3.91
6737 7352 8.415950 TTTATTTTGGACATATGTCTTGTGGT 57.584 30.769 29.87 16.64 44.20 4.16
6765 7385 7.338196 TGGTGGTTATGGTTATCTGTTGTTATG 59.662 37.037 0.00 0.00 0.00 1.90
6811 7479 4.269183 TCATGTTCAGTTGGTGTTCACTT 58.731 39.130 2.98 0.00 0.00 3.16
6837 7505 0.328926 TGCTGGAATCACATGCTCCA 59.671 50.000 0.00 0.00 36.89 3.86
6840 7508 1.337071 CTGGAATCACATGCTCCATGC 59.663 52.381 5.19 0.00 44.80 4.06
6881 7549 4.526970 TGGAGATTGGAAATAAGGTGAGC 58.473 43.478 0.00 0.00 0.00 4.26
6889 7557 3.696548 GGAAATAAGGTGAGCTTCCCTTG 59.303 47.826 21.83 0.00 41.16 3.61
7102 7782 2.170397 CAGGGCCAAAAGGTTCTTTTGT 59.830 45.455 23.18 9.16 37.62 2.83
7107 7787 4.500887 GGCCAAAAGGTTCTTTTGTACTCC 60.501 45.833 23.18 16.75 37.62 3.85
7108 7788 4.500887 GCCAAAAGGTTCTTTTGTACTCCC 60.501 45.833 23.18 8.02 37.62 4.30
7109 7789 4.893524 CCAAAAGGTTCTTTTGTACTCCCT 59.106 41.667 23.18 0.00 37.62 4.20
7110 7790 5.362717 CCAAAAGGTTCTTTTGTACTCCCTT 59.637 40.000 23.18 0.00 37.62 3.95
7111 7791 6.461092 CCAAAAGGTTCTTTTGTACTCCCTTC 60.461 42.308 23.18 0.00 37.62 3.46
7112 7792 4.004196 AGGTTCTTTTGTACTCCCTTCG 57.996 45.455 0.00 0.00 0.00 3.79
7113 7793 3.390311 AGGTTCTTTTGTACTCCCTTCGT 59.610 43.478 0.00 0.00 0.00 3.85
7114 7794 4.132336 GGTTCTTTTGTACTCCCTTCGTT 58.868 43.478 0.00 0.00 0.00 3.85
7115 7795 4.212847 GGTTCTTTTGTACTCCCTTCGTTC 59.787 45.833 0.00 0.00 0.00 3.95
7116 7796 3.645884 TCTTTTGTACTCCCTTCGTTCG 58.354 45.455 0.00 0.00 0.00 3.95
7117 7797 2.443887 TTTGTACTCCCTTCGTTCGG 57.556 50.000 0.00 0.00 0.00 4.30
7118 7798 1.619654 TTGTACTCCCTTCGTTCGGA 58.380 50.000 0.00 0.00 0.00 4.55
7119 7799 1.619654 TGTACTCCCTTCGTTCGGAA 58.380 50.000 0.00 0.00 0.00 4.30
7120 7800 2.173519 TGTACTCCCTTCGTTCGGAAT 58.826 47.619 0.00 0.00 33.26 3.01
7121 7801 2.564062 TGTACTCCCTTCGTTCGGAATT 59.436 45.455 0.00 0.00 33.26 2.17
7122 7802 3.763360 TGTACTCCCTTCGTTCGGAATTA 59.237 43.478 0.00 0.00 33.26 1.40
7123 7803 3.242549 ACTCCCTTCGTTCGGAATTAC 57.757 47.619 0.00 0.00 33.26 1.89
7124 7804 2.830321 ACTCCCTTCGTTCGGAATTACT 59.170 45.455 0.00 0.00 33.26 2.24
7125 7805 3.260128 ACTCCCTTCGTTCGGAATTACTT 59.740 43.478 0.00 0.00 33.26 2.24
7126 7806 3.592059 TCCCTTCGTTCGGAATTACTTG 58.408 45.455 0.00 0.00 33.26 3.16
7127 7807 3.007182 TCCCTTCGTTCGGAATTACTTGT 59.993 43.478 0.00 0.00 33.26 3.16
7128 7808 3.370061 CCCTTCGTTCGGAATTACTTGTC 59.630 47.826 0.00 0.00 33.26 3.18
7129 7809 4.243270 CCTTCGTTCGGAATTACTTGTCT 58.757 43.478 0.00 0.00 33.26 3.41
7130 7810 4.326548 CCTTCGTTCGGAATTACTTGTCTC 59.673 45.833 0.00 0.00 33.26 3.36
7131 7811 3.495193 TCGTTCGGAATTACTTGTCTCG 58.505 45.455 0.00 0.00 0.00 4.04
7132 7812 3.189080 TCGTTCGGAATTACTTGTCTCGA 59.811 43.478 0.00 0.00 0.00 4.04
7133 7813 3.916172 CGTTCGGAATTACTTGTCTCGAA 59.084 43.478 0.00 0.00 33.66 3.71
7134 7814 4.383649 CGTTCGGAATTACTTGTCTCGAAA 59.616 41.667 0.00 0.00 37.00 3.46
7135 7815 5.107760 CGTTCGGAATTACTTGTCTCGAAAA 60.108 40.000 0.00 0.00 37.00 2.29
7136 7816 6.400727 CGTTCGGAATTACTTGTCTCGAAAAT 60.401 38.462 0.00 0.00 37.00 1.82
7137 7817 6.403333 TCGGAATTACTTGTCTCGAAAATG 57.597 37.500 0.00 0.00 0.00 2.32
7138 7818 5.929992 TCGGAATTACTTGTCTCGAAAATGT 59.070 36.000 0.00 0.00 0.00 2.71
7139 7819 7.092079 TCGGAATTACTTGTCTCGAAAATGTA 58.908 34.615 0.00 0.00 0.00 2.29
7140 7820 7.762615 TCGGAATTACTTGTCTCGAAAATGTAT 59.237 33.333 0.00 0.00 0.00 2.29
7141 7821 7.846107 CGGAATTACTTGTCTCGAAAATGTATG 59.154 37.037 0.00 0.00 0.00 2.39
7142 7822 8.665685 GGAATTACTTGTCTCGAAAATGTATGT 58.334 33.333 0.00 0.00 0.00 2.29
7181 7861 9.664332 AATATGTCTAGATACATCCATTTCTGC 57.336 33.333 0.00 0.00 40.52 4.26
7182 7862 5.532557 TGTCTAGATACATCCATTTCTGCG 58.467 41.667 0.00 0.00 0.00 5.18
7183 7863 5.301805 TGTCTAGATACATCCATTTCTGCGA 59.698 40.000 0.00 0.00 0.00 5.10
7184 7864 5.631512 GTCTAGATACATCCATTTCTGCGAC 59.368 44.000 0.00 0.00 0.00 5.19
7185 7865 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
7186 7866 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
7187 7867 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
7188 7868 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
7189 7869 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
7190 7870 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
7191 7871 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
7192 7872 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
7193 7873 5.957842 TCCATTTCTGCGACAAGTAATTT 57.042 34.783 0.00 0.00 0.00 1.82
7194 7874 5.938322 TCCATTTCTGCGACAAGTAATTTC 58.062 37.500 0.00 0.00 0.00 2.17
7195 7875 4.788100 CCATTTCTGCGACAAGTAATTTCG 59.212 41.667 0.00 4.05 35.82 3.46
7196 7876 5.390461 CCATTTCTGCGACAAGTAATTTCGA 60.390 40.000 10.25 0.00 34.62 3.71
7197 7877 5.660629 TTTCTGCGACAAGTAATTTCGAA 57.339 34.783 0.00 0.00 34.62 3.71
7198 7878 4.640805 TCTGCGACAAGTAATTTCGAAC 57.359 40.909 0.00 0.00 34.62 3.95
7199 7879 3.120616 TCTGCGACAAGTAATTTCGAACG 59.879 43.478 0.00 0.00 34.62 3.95
7200 7880 2.156117 TGCGACAAGTAATTTCGAACGG 59.844 45.455 0.00 0.00 34.62 4.44
7201 7881 2.409378 GCGACAAGTAATTTCGAACGGA 59.591 45.455 0.00 0.00 34.62 4.69
7202 7882 3.481467 GCGACAAGTAATTTCGAACGGAG 60.481 47.826 0.00 0.00 34.62 4.63
7203 7883 3.060363 CGACAAGTAATTTCGAACGGAGG 59.940 47.826 0.00 0.00 34.62 4.30
7204 7884 3.332034 ACAAGTAATTTCGAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
7205 7885 3.007182 ACAAGTAATTTCGAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
7206 7886 3.521947 AGTAATTTCGAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
7207 7887 2.830321 AGTAATTTCGAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
7208 7888 2.853235 AATTTCGAACGGAGGGAGTT 57.147 45.000 0.00 0.00 34.07 3.01
7209 7889 2.381725 ATTTCGAACGGAGGGAGTTC 57.618 50.000 0.00 0.00 43.16 3.01
7210 7890 1.335145 TTTCGAACGGAGGGAGTTCT 58.665 50.000 0.00 0.00 44.08 3.01
7211 7891 0.886563 TTCGAACGGAGGGAGTTCTC 59.113 55.000 0.00 0.00 44.08 2.87
7212 7892 0.251033 TCGAACGGAGGGAGTTCTCA 60.251 55.000 7.37 0.00 44.08 3.27
7213 7893 0.601558 CGAACGGAGGGAGTTCTCAA 59.398 55.000 7.37 0.00 44.08 3.02
7214 7894 1.204941 CGAACGGAGGGAGTTCTCAAT 59.795 52.381 7.37 0.00 44.08 2.57
7215 7895 2.426024 CGAACGGAGGGAGTTCTCAATA 59.574 50.000 7.37 0.00 44.08 1.90
7216 7896 3.489398 CGAACGGAGGGAGTTCTCAATAG 60.489 52.174 7.37 0.00 44.08 1.73
7217 7897 2.389715 ACGGAGGGAGTTCTCAATAGG 58.610 52.381 2.24 0.00 35.58 2.57
7218 7898 1.689273 CGGAGGGAGTTCTCAATAGGG 59.311 57.143 2.24 0.00 35.58 3.53
7219 7899 2.765502 GGAGGGAGTTCTCAATAGGGT 58.234 52.381 2.24 0.00 35.58 4.34
7220 7900 3.690438 CGGAGGGAGTTCTCAATAGGGTA 60.690 52.174 2.24 0.00 35.58 3.69
7221 7901 4.494591 GGAGGGAGTTCTCAATAGGGTAT 58.505 47.826 2.24 0.00 35.58 2.73
7222 7902 4.908481 GGAGGGAGTTCTCAATAGGGTATT 59.092 45.833 2.24 0.00 35.58 1.89
7223 7903 5.369993 GGAGGGAGTTCTCAATAGGGTATTT 59.630 44.000 2.24 0.00 35.58 1.40
7224 7904 6.557633 GGAGGGAGTTCTCAATAGGGTATTTA 59.442 42.308 2.24 0.00 35.58 1.40
7225 7905 7.256368 GGAGGGAGTTCTCAATAGGGTATTTAG 60.256 44.444 2.24 0.00 35.58 1.85
7226 7906 6.559157 AGGGAGTTCTCAATAGGGTATTTAGG 59.441 42.308 2.24 0.00 0.00 2.69
7227 7907 6.557633 GGGAGTTCTCAATAGGGTATTTAGGA 59.442 42.308 2.24 0.00 0.00 2.94
7228 7908 7.256368 GGGAGTTCTCAATAGGGTATTTAGGAG 60.256 44.444 2.24 0.00 0.00 3.69
7229 7909 7.509659 GGAGTTCTCAATAGGGTATTTAGGAGA 59.490 40.741 2.24 0.00 0.00 3.71
7230 7910 8.485578 AGTTCTCAATAGGGTATTTAGGAGAG 57.514 38.462 0.00 0.00 30.96 3.20
7231 7911 8.068733 AGTTCTCAATAGGGTATTTAGGAGAGT 58.931 37.037 0.00 0.00 30.96 3.24
7232 7912 7.841282 TCTCAATAGGGTATTTAGGAGAGTG 57.159 40.000 0.00 0.00 0.00 3.51
7233 7913 7.592736 TCTCAATAGGGTATTTAGGAGAGTGA 58.407 38.462 0.00 0.00 0.00 3.41
7234 7914 7.506261 TCTCAATAGGGTATTTAGGAGAGTGAC 59.494 40.741 0.00 0.00 0.00 3.67
7235 7915 6.264744 TCAATAGGGTATTTAGGAGAGTGACG 59.735 42.308 0.00 0.00 0.00 4.35
7236 7916 3.297736 AGGGTATTTAGGAGAGTGACGG 58.702 50.000 0.00 0.00 0.00 4.79
7237 7917 2.364647 GGGTATTTAGGAGAGTGACGGG 59.635 54.545 0.00 0.00 0.00 5.28
7238 7918 2.364647 GGTATTTAGGAGAGTGACGGGG 59.635 54.545 0.00 0.00 0.00 5.73
7239 7919 2.544844 ATTTAGGAGAGTGACGGGGA 57.455 50.000 0.00 0.00 0.00 4.81
7240 7920 1.848652 TTTAGGAGAGTGACGGGGAG 58.151 55.000 0.00 0.00 0.00 4.30
7241 7921 0.997363 TTAGGAGAGTGACGGGGAGA 59.003 55.000 0.00 0.00 0.00 3.71
7242 7922 0.547075 TAGGAGAGTGACGGGGAGAG 59.453 60.000 0.00 0.00 0.00 3.20
7243 7923 2.419739 GGAGAGTGACGGGGAGAGC 61.420 68.421 0.00 0.00 0.00 4.09
7244 7924 2.363147 AGAGTGACGGGGAGAGCC 60.363 66.667 0.00 0.00 0.00 4.70
7245 7925 2.680352 GAGTGACGGGGAGAGCCA 60.680 66.667 0.00 0.00 35.15 4.75
7246 7926 2.681778 AGTGACGGGGAGAGCCAG 60.682 66.667 0.00 0.00 35.15 4.85
7247 7927 3.775654 GTGACGGGGAGAGCCAGG 61.776 72.222 0.00 0.00 35.15 4.45
7248 7928 3.992641 TGACGGGGAGAGCCAGGA 61.993 66.667 0.00 0.00 35.15 3.86
7249 7929 2.683933 GACGGGGAGAGCCAGGAA 60.684 66.667 0.00 0.00 35.15 3.36
7250 7930 3.003763 ACGGGGAGAGCCAGGAAC 61.004 66.667 0.00 0.00 35.15 3.62
7251 7931 4.148825 CGGGGAGAGCCAGGAACG 62.149 72.222 0.00 0.00 35.15 3.95
7252 7932 4.475135 GGGGAGAGCCAGGAACGC 62.475 72.222 0.00 0.00 35.15 4.84
7253 7933 4.821589 GGGAGAGCCAGGAACGCG 62.822 72.222 3.53 3.53 35.15 6.01
7255 7935 4.742201 GAGAGCCAGGAACGCGCA 62.742 66.667 5.73 0.00 0.00 6.09
7256 7936 4.749310 AGAGCCAGGAACGCGCAG 62.749 66.667 5.73 2.42 0.00 5.18
7298 7978 4.493747 CGAGGCGACGGGAGGAAC 62.494 72.222 0.00 0.00 0.00 3.62
7299 7979 4.144703 GAGGCGACGGGAGGAACC 62.145 72.222 0.00 0.00 38.08 3.62
7308 7988 4.893601 GGAGGAACCCTAGCGCGC 62.894 72.222 26.66 26.66 31.76 6.86
7309 7989 3.839432 GAGGAACCCTAGCGCGCT 61.839 66.667 38.01 38.01 31.76 5.92
7310 7990 4.148825 AGGAACCCTAGCGCGCTG 62.149 66.667 41.85 29.32 28.47 5.18
7324 8004 3.435186 GCTGCCGCCAACTCCTTC 61.435 66.667 0.00 0.00 0.00 3.46
7325 8005 2.747855 CTGCCGCCAACTCCTTCC 60.748 66.667 0.00 0.00 0.00 3.46
7326 8006 4.344865 TGCCGCCAACTCCTTCCC 62.345 66.667 0.00 0.00 0.00 3.97
7328 8008 3.646715 CCGCCAACTCCTTCCCCA 61.647 66.667 0.00 0.00 0.00 4.96
7329 8009 2.359975 CGCCAACTCCTTCCCCAC 60.360 66.667 0.00 0.00 0.00 4.61
7330 8010 2.035783 GCCAACTCCTTCCCCACC 59.964 66.667 0.00 0.00 0.00 4.61
7331 8011 2.763902 CCAACTCCTTCCCCACCC 59.236 66.667 0.00 0.00 0.00 4.61
7332 8012 2.763902 CAACTCCTTCCCCACCCC 59.236 66.667 0.00 0.00 0.00 4.95
7333 8013 1.852626 CAACTCCTTCCCCACCCCT 60.853 63.158 0.00 0.00 0.00 4.79
7334 8014 1.541620 AACTCCTTCCCCACCCCTC 60.542 63.158 0.00 0.00 0.00 4.30
7335 8015 2.692741 CTCCTTCCCCACCCCTCC 60.693 72.222 0.00 0.00 0.00 4.30
7336 8016 3.216371 TCCTTCCCCACCCCTCCT 61.216 66.667 0.00 0.00 0.00 3.69
7337 8017 2.692741 CCTTCCCCACCCCTCCTC 60.693 72.222 0.00 0.00 0.00 3.71
7338 8018 2.692741 CTTCCCCACCCCTCCTCC 60.693 72.222 0.00 0.00 0.00 4.30
7339 8019 3.216371 TTCCCCACCCCTCCTCCT 61.216 66.667 0.00 0.00 0.00 3.69
7340 8020 3.268647 TTCCCCACCCCTCCTCCTC 62.269 68.421 0.00 0.00 0.00 3.71
7341 8021 4.825679 CCCCACCCCTCCTCCTCC 62.826 77.778 0.00 0.00 0.00 4.30
7342 8022 4.825679 CCCACCCCTCCTCCTCCC 62.826 77.778 0.00 0.00 0.00 4.30
7343 8023 3.700350 CCACCCCTCCTCCTCCCT 61.700 72.222 0.00 0.00 0.00 4.20
7344 8024 2.041405 CACCCCTCCTCCTCCCTC 60.041 72.222 0.00 0.00 0.00 4.30
7345 8025 3.756783 ACCCCTCCTCCTCCCTCG 61.757 72.222 0.00 0.00 0.00 4.63
7347 8027 4.150454 CCCTCCTCCTCCCTCGCT 62.150 72.222 0.00 0.00 0.00 4.93
7348 8028 2.837291 CCTCCTCCTCCCTCGCTG 60.837 72.222 0.00 0.00 0.00 5.18
7349 8029 3.535962 CTCCTCCTCCCTCGCTGC 61.536 72.222 0.00 0.00 0.00 5.25
7414 8094 2.835895 GAGGCCTCCTCGTCTCCC 60.836 72.222 23.19 0.00 41.08 4.30
7415 8095 4.467107 AGGCCTCCTCGTCTCCCC 62.467 72.222 0.00 0.00 0.00 4.81
7416 8096 4.467107 GGCCTCCTCGTCTCCCCT 62.467 72.222 0.00 0.00 0.00 4.79
7417 8097 2.835895 GCCTCCTCGTCTCCCCTC 60.836 72.222 0.00 0.00 0.00 4.30
7418 8098 2.123640 CCTCCTCGTCTCCCCTCC 60.124 72.222 0.00 0.00 0.00 4.30
7419 8099 2.123640 CTCCTCGTCTCCCCTCCC 60.124 72.222 0.00 0.00 0.00 4.30
7420 8100 2.944954 TCCTCGTCTCCCCTCCCA 60.945 66.667 0.00 0.00 0.00 4.37
7421 8101 2.443016 CCTCGTCTCCCCTCCCAG 60.443 72.222 0.00 0.00 0.00 4.45
7422 8102 3.151022 CTCGTCTCCCCTCCCAGC 61.151 72.222 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.333619 ACGTGTTTTTGCGCTTCTCAT 59.666 42.857 9.73 0.00 0.00 2.90
4 5 1.807242 GCCACGTGTTTTTGCGCTTC 61.807 55.000 15.65 0.00 0.00 3.86
5 6 1.876263 GCCACGTGTTTTTGCGCTT 60.876 52.632 15.65 0.00 0.00 4.68
6 7 2.278531 GCCACGTGTTTTTGCGCT 60.279 55.556 15.65 0.00 0.00 5.92
10 11 2.656973 GCCCGCCACGTGTTTTTG 60.657 61.111 15.65 0.00 0.00 2.44
11 12 4.258932 CGCCCGCCACGTGTTTTT 62.259 61.111 15.65 0.00 0.00 1.94
31 295 3.371097 TTAAGCTCGGGAGGCAGCG 62.371 63.158 0.00 0.00 40.84 5.18
34 298 1.614241 GGTCTTAAGCTCGGGAGGCA 61.614 60.000 0.00 0.00 0.00 4.75
38 302 1.262640 GGTGGGTCTTAAGCTCGGGA 61.263 60.000 0.00 0.00 0.00 5.14
40 304 1.153628 CGGTGGGTCTTAAGCTCGG 60.154 63.158 0.00 0.00 0.00 4.63
44 308 0.175073 ATCGACGGTGGGTCTTAAGC 59.825 55.000 0.00 0.00 43.79 3.09
47 311 0.533491 CCAATCGACGGTGGGTCTTA 59.467 55.000 9.82 0.00 43.79 2.10
102 366 6.140110 CGATCCGATTACTGTTGTTGTTTTT 58.860 36.000 0.00 0.00 0.00 1.94
103 367 5.237779 ACGATCCGATTACTGTTGTTGTTTT 59.762 36.000 0.00 0.00 0.00 2.43
104 368 4.753107 ACGATCCGATTACTGTTGTTGTTT 59.247 37.500 0.00 0.00 0.00 2.83
105 369 4.312443 ACGATCCGATTACTGTTGTTGTT 58.688 39.130 0.00 0.00 0.00 2.83
106 370 3.921677 ACGATCCGATTACTGTTGTTGT 58.078 40.909 0.00 0.00 0.00 3.32
107 371 4.921470 AACGATCCGATTACTGTTGTTG 57.079 40.909 0.00 0.00 0.00 3.33
108 372 5.934935 AAAACGATCCGATTACTGTTGTT 57.065 34.783 0.00 0.00 0.00 2.83
109 373 5.934935 AAAAACGATCCGATTACTGTTGT 57.065 34.783 0.00 0.00 0.00 3.32
188 455 3.646637 GCAGGGTATACAAGGAGGTGTAT 59.353 47.826 5.01 3.56 44.84 2.29
192 459 1.274184 TGGCAGGGTATACAAGGAGGT 60.274 52.381 5.01 0.00 0.00 3.85
193 460 1.507140 TGGCAGGGTATACAAGGAGG 58.493 55.000 5.01 0.00 0.00 4.30
201 468 3.048600 AGAGCAAAGATGGCAGGGTATA 58.951 45.455 0.00 0.00 0.00 1.47
204 471 1.065126 GTAGAGCAAAGATGGCAGGGT 60.065 52.381 0.00 0.00 0.00 4.34
205 472 1.673168 GTAGAGCAAAGATGGCAGGG 58.327 55.000 0.00 0.00 0.00 4.45
256 528 6.148811 GTGAAATCCTTGAGGTGTATTTCGAA 59.851 38.462 13.56 0.00 38.09 3.71
300 573 2.756760 TCCTCTACGTAAACTTGCGGAT 59.243 45.455 4.98 0.00 40.65 4.18
301 574 2.095059 GTCCTCTACGTAAACTTGCGGA 60.095 50.000 4.98 0.00 40.65 5.54
369 642 1.882623 GGAAACAAACTCTGGCCTCTG 59.117 52.381 3.32 0.00 0.00 3.35
370 643 1.494721 TGGAAACAAACTCTGGCCTCT 59.505 47.619 3.32 0.00 37.44 3.69
419 693 2.252260 CGCCAACAAACTGCCTCG 59.748 61.111 0.00 0.00 0.00 4.63
523 832 4.067896 CAGATCTCTCTCTCTACCTCTGC 58.932 52.174 0.00 0.00 0.00 4.26
524 833 5.545588 CTCAGATCTCTCTCTCTACCTCTG 58.454 50.000 0.00 0.00 0.00 3.35
525 834 4.040952 GCTCAGATCTCTCTCTCTACCTCT 59.959 50.000 0.00 0.00 0.00 3.69
526 835 4.202357 TGCTCAGATCTCTCTCTCTACCTC 60.202 50.000 0.00 0.00 0.00 3.85
527 836 3.716353 TGCTCAGATCTCTCTCTCTACCT 59.284 47.826 0.00 0.00 0.00 3.08
528 837 4.067896 CTGCTCAGATCTCTCTCTCTACC 58.932 52.174 0.00 0.00 0.00 3.18
529 838 4.067896 CCTGCTCAGATCTCTCTCTCTAC 58.932 52.174 0.00 0.00 0.00 2.59
530 839 3.973305 TCCTGCTCAGATCTCTCTCTCTA 59.027 47.826 0.00 0.00 0.00 2.43
531 840 2.779430 TCCTGCTCAGATCTCTCTCTCT 59.221 50.000 0.00 0.00 0.00 3.10
532 841 3.144506 CTCCTGCTCAGATCTCTCTCTC 58.855 54.545 0.00 0.00 0.00 3.20
533 842 2.779430 TCTCCTGCTCAGATCTCTCTCT 59.221 50.000 0.00 0.00 0.00 3.10
534 843 3.144506 CTCTCCTGCTCAGATCTCTCTC 58.855 54.545 0.00 0.00 0.00 3.20
535 844 2.511218 ACTCTCCTGCTCAGATCTCTCT 59.489 50.000 0.00 0.00 0.00 3.10
536 845 2.880890 GACTCTCCTGCTCAGATCTCTC 59.119 54.545 0.00 0.00 0.00 3.20
537 846 2.746142 CGACTCTCCTGCTCAGATCTCT 60.746 54.545 0.00 0.00 0.00 3.10
538 847 1.603802 CGACTCTCCTGCTCAGATCTC 59.396 57.143 0.00 0.00 0.00 2.75
561 870 1.226746 GGCGTGATTTATTCCGAGGG 58.773 55.000 0.00 0.00 0.00 4.30
594 913 0.179176 TGTGTTTGTGTTGTGCGCTC 60.179 50.000 9.73 5.51 0.00 5.03
595 914 0.455972 GTGTGTTTGTGTTGTGCGCT 60.456 50.000 9.73 0.00 0.00 5.92
596 915 0.730834 TGTGTGTTTGTGTTGTGCGC 60.731 50.000 0.00 0.00 0.00 6.09
597 916 1.135831 TCTGTGTGTTTGTGTTGTGCG 60.136 47.619 0.00 0.00 0.00 5.34
598 917 2.627863 TCTGTGTGTTTGTGTTGTGC 57.372 45.000 0.00 0.00 0.00 4.57
599 918 2.908009 CGTTCTGTGTGTTTGTGTTGTG 59.092 45.455 0.00 0.00 0.00 3.33
600 919 2.095466 CCGTTCTGTGTGTTTGTGTTGT 60.095 45.455 0.00 0.00 0.00 3.32
601 920 2.160615 TCCGTTCTGTGTGTTTGTGTTG 59.839 45.455 0.00 0.00 0.00 3.33
602 921 2.418628 CTCCGTTCTGTGTGTTTGTGTT 59.581 45.455 0.00 0.00 0.00 3.32
606 925 0.307760 GCCTCCGTTCTGTGTGTTTG 59.692 55.000 0.00 0.00 0.00 2.93
636 955 2.179517 GTCTGTGGCCGTCTCTCG 59.820 66.667 0.00 0.00 39.52 4.04
642 961 2.982130 GGATCTGTCTGTGGCCGT 59.018 61.111 0.00 0.00 0.00 5.68
643 962 2.202797 CGGATCTGTCTGTGGCCG 60.203 66.667 0.00 0.00 0.00 6.13
644 963 1.153549 GACGGATCTGTCTGTGGCC 60.154 63.158 24.73 0.00 43.95 5.36
645 964 4.504132 GACGGATCTGTCTGTGGC 57.496 61.111 24.73 0.30 43.95 5.01
651 970 1.787057 ATCGGCGAGACGGATCTGTC 61.787 60.000 24.65 24.65 33.30 3.51
689 1008 2.579787 GCGATATCGATCCGGGCG 60.580 66.667 28.63 6.44 43.02 6.13
690 1009 2.885861 AGCGATATCGATCCGGGC 59.114 61.111 28.63 8.77 43.02 6.13
841 1163 0.169672 GCCTCATCATGCACACACAC 59.830 55.000 0.00 0.00 0.00 3.82
843 1165 0.679002 AGGCCTCATCATGCACACAC 60.679 55.000 0.00 0.00 0.00 3.82
851 1173 0.179073 CGAAACCGAGGCCTCATCAT 60.179 55.000 31.67 15.18 0.00 2.45
857 1179 4.699522 GGCACGAAACCGAGGCCT 62.700 66.667 3.86 3.86 42.80 5.19
947 1270 1.302033 ACGCCAGAGCCAGAAACAG 60.302 57.895 0.00 0.00 34.57 3.16
1196 1519 1.841103 GGCAGATCCTCCTCCTCCC 60.841 68.421 0.00 0.00 0.00 4.30
1261 1584 4.418328 CAATTCCCCACCGGCGGA 62.418 66.667 35.78 9.55 0.00 5.54
1336 1659 0.469331 TCAACCTCAGACTCCACCGT 60.469 55.000 0.00 0.00 0.00 4.83
1448 1771 4.214119 TCTTAAGTTCTGTTGCTGCATCAC 59.786 41.667 9.22 3.47 0.00 3.06
1449 1772 4.388485 TCTTAAGTTCTGTTGCTGCATCA 58.612 39.130 12.40 12.40 0.00 3.07
1652 1975 4.062293 CGAAACAATGGTACCAGACTCAA 58.938 43.478 21.41 0.00 0.00 3.02
1663 1986 2.289694 CCTCAGACTCCGAAACAATGGT 60.290 50.000 0.00 0.00 0.00 3.55
1671 1994 1.228894 ACTGCCCTCAGACTCCGAA 60.229 57.895 0.00 0.00 42.95 4.30
1673 1996 2.575993 CACTGCCCTCAGACTCCG 59.424 66.667 0.00 0.00 42.95 4.63
1744 2067 2.260822 CCCCGAGATACCTGATCCATT 58.739 52.381 0.00 0.00 34.80 3.16
1801 2124 2.094026 CGTGAATCACAGGATCAGTGGA 60.094 50.000 14.24 5.38 37.58 4.02
1846 2169 1.123077 ACCAACTCTGTGACTGCAGA 58.877 50.000 23.35 0.00 42.56 4.26
1861 2184 0.329261 CTCCCATCCTGCTCAACCAA 59.671 55.000 0.00 0.00 0.00 3.67
1866 2189 1.300963 GTTGCTCCCATCCTGCTCA 59.699 57.895 0.00 0.00 0.00 4.26
1901 2224 0.384669 GCCAGAATCAGCAATCTGCC 59.615 55.000 0.00 0.00 46.52 4.85
1981 2304 2.698855 TCCAATACTTCAGGCTCAGC 57.301 50.000 0.00 0.00 0.00 4.26
2030 2455 5.611374 CAACAACTTCCTCTTCTGAAGGTA 58.389 41.667 16.83 0.00 42.79 3.08
2067 2492 0.892358 CAGCAGTGTCCTTGGCACAT 60.892 55.000 13.60 1.38 41.04 3.21
2122 2547 0.474184 ACTTCAACCACACCAGAGGG 59.526 55.000 0.00 0.00 41.29 4.30
2145 2570 4.401519 TCACCATCCTTTCCTACTACTTCG 59.598 45.833 0.00 0.00 0.00 3.79
2148 2573 4.290942 CCTCACCATCCTTTCCTACTACT 58.709 47.826 0.00 0.00 0.00 2.57
2196 2621 0.458543 CGTCAGATGAGGGGACAACG 60.459 60.000 0.00 0.00 0.00 4.10
2232 2657 3.160269 CTCATTTGTTCCCTCCTTTGCT 58.840 45.455 0.00 0.00 0.00 3.91
2244 2669 1.551883 GCAGGAATGGCCTCATTTGTT 59.448 47.619 3.32 0.00 46.97 2.83
2316 2741 6.211384 TGACAGAAGAGACATCATCCTTAACA 59.789 38.462 0.00 0.00 0.00 2.41
2345 2770 7.821359 CAGGATCTTCTGAATTTACTGACTGAA 59.179 37.037 6.22 0.00 36.93 3.02
2366 2791 3.245264 CCCCTTAGGTTCAACAACAGGAT 60.245 47.826 0.00 0.00 33.70 3.24
2370 2795 2.136863 TCCCCCTTAGGTTCAACAACA 58.863 47.619 0.00 0.00 33.70 3.33
2432 2857 2.507484 CCTTCACATCAGAAACTGCCA 58.493 47.619 0.00 0.00 0.00 4.92
2433 2858 1.200948 GCCTTCACATCAGAAACTGCC 59.799 52.381 0.00 0.00 0.00 4.85
2495 2920 2.762887 TCAGATGCCGACTTGAGATCTT 59.237 45.455 0.00 0.00 0.00 2.40
2533 2958 1.061131 GTCGGACGAATTCACATGCAG 59.939 52.381 6.22 0.00 0.00 4.41
2540 2965 2.139917 CAACTTGGTCGGACGAATTCA 58.860 47.619 6.04 0.00 0.00 2.57
2610 3035 8.253810 CCAGTCTGTTCAGAAGAATAGTCATTA 58.746 37.037 3.99 0.00 41.92 1.90
2614 3039 6.274157 TCCAGTCTGTTCAGAAGAATAGTC 57.726 41.667 3.99 0.00 41.92 2.59
2615 3040 6.672266 TTCCAGTCTGTTCAGAAGAATAGT 57.328 37.500 3.99 0.00 41.92 2.12
2616 3041 6.091986 GCTTTCCAGTCTGTTCAGAAGAATAG 59.908 42.308 3.99 8.89 42.42 1.73
2617 3042 5.934625 GCTTTCCAGTCTGTTCAGAAGAATA 59.065 40.000 3.99 0.00 35.92 1.75
2618 3043 4.759183 GCTTTCCAGTCTGTTCAGAAGAAT 59.241 41.667 3.99 0.00 35.92 2.40
2619 3044 4.130118 GCTTTCCAGTCTGTTCAGAAGAA 58.870 43.478 3.99 5.79 0.00 2.52
2620 3045 3.134623 TGCTTTCCAGTCTGTTCAGAAGA 59.865 43.478 3.99 0.16 0.00 2.87
2621 3046 3.249559 GTGCTTTCCAGTCTGTTCAGAAG 59.750 47.826 3.99 1.10 0.00 2.85
2622 3047 3.206150 GTGCTTTCCAGTCTGTTCAGAA 58.794 45.455 3.99 0.00 0.00 3.02
2623 3048 2.803133 CGTGCTTTCCAGTCTGTTCAGA 60.803 50.000 0.00 0.00 0.00 3.27
2624 3049 1.528586 CGTGCTTTCCAGTCTGTTCAG 59.471 52.381 0.00 0.00 0.00 3.02
2625 3050 1.138069 TCGTGCTTTCCAGTCTGTTCA 59.862 47.619 0.00 0.00 0.00 3.18
2626 3051 1.795286 CTCGTGCTTTCCAGTCTGTTC 59.205 52.381 0.00 0.00 0.00 3.18
2627 3052 1.871080 CTCGTGCTTTCCAGTCTGTT 58.129 50.000 0.00 0.00 0.00 3.16
2628 3053 0.601311 GCTCGTGCTTTCCAGTCTGT 60.601 55.000 1.41 0.00 36.03 3.41
2629 3054 0.601046 TGCTCGTGCTTTCCAGTCTG 60.601 55.000 11.19 0.00 40.48 3.51
2630 3055 0.320247 CTGCTCGTGCTTTCCAGTCT 60.320 55.000 11.19 0.00 40.48 3.24
2631 3056 0.601311 ACTGCTCGTGCTTTCCAGTC 60.601 55.000 11.19 0.00 40.48 3.51
2632 3057 0.179045 AACTGCTCGTGCTTTCCAGT 60.179 50.000 11.19 2.38 40.48 4.00
2633 3058 0.236711 CAACTGCTCGTGCTTTCCAG 59.763 55.000 11.19 1.73 40.48 3.86
2634 3059 1.165907 CCAACTGCTCGTGCTTTCCA 61.166 55.000 11.19 0.00 40.48 3.53
2635 3060 0.884704 TCCAACTGCTCGTGCTTTCC 60.885 55.000 11.19 0.00 40.48 3.13
2636 3061 0.944386 TTCCAACTGCTCGTGCTTTC 59.056 50.000 11.19 0.00 40.48 2.62
2637 3062 1.609208 ATTCCAACTGCTCGTGCTTT 58.391 45.000 11.19 1.25 40.48 3.51
2638 3063 1.609208 AATTCCAACTGCTCGTGCTT 58.391 45.000 11.19 0.00 40.48 3.91
2639 3064 2.076863 GTAATTCCAACTGCTCGTGCT 58.923 47.619 11.19 0.00 40.48 4.40
2640 3065 1.130561 GGTAATTCCAACTGCTCGTGC 59.869 52.381 1.71 1.71 36.52 5.34
2641 3066 2.416547 CAGGTAATTCCAACTGCTCGTG 59.583 50.000 0.00 0.00 39.02 4.35
2642 3067 2.615493 CCAGGTAATTCCAACTGCTCGT 60.615 50.000 0.00 0.00 39.02 4.18
2643 3068 2.009774 CCAGGTAATTCCAACTGCTCG 58.990 52.381 0.00 0.00 39.02 5.03
2684 3139 7.036996 TCAATCACAGCATTGTCACTTTTAA 57.963 32.000 0.00 0.00 34.62 1.52
2704 3159 3.330701 TCTTTACCTGGTTCTGCCTCAAT 59.669 43.478 3.84 0.00 38.35 2.57
2706 3161 2.303022 CTCTTTACCTGGTTCTGCCTCA 59.697 50.000 3.84 0.00 38.35 3.86
2745 3200 2.027314 GCCGCATGCAACACAACA 59.973 55.556 19.57 0.00 40.77 3.33
2807 3262 5.924254 TCCGGCTTTACGTAATCATTATCAG 59.076 40.000 9.18 2.01 0.00 2.90
2814 3269 4.338964 TCAGTATCCGGCTTTACGTAATCA 59.661 41.667 9.18 0.00 0.00 2.57
2815 3270 4.863491 TCAGTATCCGGCTTTACGTAATC 58.137 43.478 9.18 4.31 0.00 1.75
2826 3281 2.280628 CTTTCCAACTCAGTATCCGGC 58.719 52.381 0.00 0.00 0.00 6.13
2874 3329 8.288208 GTGGTGCTAGATATTTCATCAGAATTG 58.712 37.037 0.00 0.00 32.89 2.32
2899 3354 7.624549 ACACCAGATATAACTTCATTGACAGT 58.375 34.615 0.00 0.00 0.00 3.55
2939 3394 2.138320 CGTCATCTGTCACAGCAGTTT 58.862 47.619 0.00 0.00 37.70 2.66
2984 3439 4.634883 CAGCAGTTTCACTAAGAGATGCAT 59.365 41.667 0.00 0.00 34.87 3.96
2997 3452 3.316029 CACCTTCATCAACAGCAGTTTCA 59.684 43.478 0.00 0.00 35.28 2.69
3013 3468 1.135859 CGATGCAACAGCTTCACCTTC 60.136 52.381 0.00 0.00 33.42 3.46
3032 3487 7.295952 ACAACAGAAGCTTTATTATCAGTCG 57.704 36.000 0.00 0.00 0.00 4.18
3068 3523 2.046892 CTGTGGCGGAAGAGGGTG 60.047 66.667 0.00 0.00 0.00 4.61
3078 3533 1.081892 CAGATTCACTTCCTGTGGCG 58.918 55.000 0.00 0.00 46.20 5.69
3082 3537 3.755378 GCAACATCAGATTCACTTCCTGT 59.245 43.478 0.00 0.00 0.00 4.00
3106 3561 1.197721 CGAAACATCACCAGCTTCACC 59.802 52.381 0.00 0.00 0.00 4.02
3107 3562 1.400242 GCGAAACATCACCAGCTTCAC 60.400 52.381 0.00 0.00 0.00 3.18
3130 3585 3.627577 ACCAAATCACATGATTCGCCTAC 59.372 43.478 7.55 0.00 43.41 3.18
3142 3597 4.148079 TGGCAATCTGTAACCAAATCACA 58.852 39.130 0.00 0.00 0.00 3.58
3183 3638 3.668447 AGTTGATGCGTCAAGAATGTCT 58.332 40.909 21.55 11.02 44.58 3.41
3234 3689 1.098050 CAACTGGCAGGCAAGGATAC 58.902 55.000 20.34 0.00 0.00 2.24
3260 3715 2.827652 GAGCCTTAACTCCAGATTCCG 58.172 52.381 0.00 0.00 0.00 4.30
3285 3740 2.738521 CCTGTCGCCTTGTCGGTG 60.739 66.667 0.00 0.00 44.95 4.94
3288 3743 3.414700 GTGCCTGTCGCCTTGTCG 61.415 66.667 0.00 0.00 36.24 4.35
3300 3755 1.135915 GATGTCTCATCTGACGTGCCT 59.864 52.381 0.00 0.00 39.64 4.75
3302 3757 1.134995 TGGATGTCTCATCTGACGTGC 60.135 52.381 0.00 0.00 42.24 5.34
3456 3911 4.393680 TCACAAACAACTATATTCGGCACC 59.606 41.667 0.00 0.00 0.00 5.01
3536 3992 3.581437 TTCCACTGGAACTACCCCA 57.419 52.632 6.39 0.00 36.71 4.96
3557 4013 4.034742 TGTGCATGTTCATCATCATTCTCG 59.965 41.667 0.00 0.00 34.09 4.04
3635 4091 3.494048 CCTTGTCACTCTCAAGCTCAACT 60.494 47.826 0.00 0.00 40.35 3.16
3641 4097 2.550830 TTCCCTTGTCACTCTCAAGC 57.449 50.000 0.00 0.00 40.35 4.01
3676 4132 2.146342 CGATGAAGAACTTGTGTGGCT 58.854 47.619 0.00 0.00 0.00 4.75
3736 4192 3.437049 GTGAACTTGAGCATCTTGTACCC 59.563 47.826 0.00 0.00 34.92 3.69
3758 4214 1.440893 CTGAGTCAGGCGATCCAGG 59.559 63.158 12.67 0.00 33.74 4.45
3925 4381 2.910688 TTCTCTTCTTTCCGTGCTGT 57.089 45.000 0.00 0.00 0.00 4.40
3944 4400 1.736126 CATGTGCAACTCTCGCTTCAT 59.264 47.619 0.00 0.00 38.04 2.57
3956 4412 2.596923 TCTTGCCGGCATGTGCAA 60.597 55.556 33.70 17.85 44.64 4.08
3966 4422 3.526931 TCTAGAACATTCCTCTTGCCG 57.473 47.619 0.00 0.00 0.00 5.69
3984 4440 1.250328 TCGTTGACCGTACACCATCT 58.750 50.000 0.00 0.00 37.94 2.90
4002 4458 4.789012 TGCTTGATTCAACTTCCCAATC 57.211 40.909 0.00 0.00 0.00 2.67
4055 4511 6.306987 AGGTCAATACACCAGAACAGAATTT 58.693 36.000 0.00 0.00 39.16 1.82
4064 4520 6.877668 TGGTAATAAGGTCAATACACCAGA 57.122 37.500 0.00 0.00 39.16 3.86
4102 4558 7.412853 AGATGACAGATCAAAAATCGCAATAC 58.587 34.615 0.00 0.00 38.69 1.89
4182 4638 7.855545 TCTCTTCTTTCAAAGAAATTGTCTCG 58.144 34.615 13.61 0.25 46.13 4.04
4185 4641 9.794685 AGTTTCTCTTCTTTCAAAGAAATTGTC 57.205 29.630 13.61 3.96 46.13 3.18
4233 4689 1.332195 GCTTCCTTTGGGCTTTCAGT 58.668 50.000 0.00 0.00 0.00 3.41
4311 4767 4.400251 ACCTTATGTTGCTCATGAATGTGG 59.600 41.667 0.00 0.00 37.91 4.17
4349 4805 3.181482 TGCGAATTGAAAAGAACAAGGCA 60.181 39.130 0.00 0.00 33.26 4.75
4350 4806 3.380142 TGCGAATTGAAAAGAACAAGGC 58.620 40.909 0.00 0.00 0.00 4.35
4385 4841 8.275758 TCTAGAGAAGACAACATAGGTCAGTAT 58.724 37.037 0.00 0.00 37.74 2.12
4400 4857 9.150348 CTTCCTTCTTCAAATTCTAGAGAAGAC 57.850 37.037 17.34 0.00 44.23 3.01
4402 4859 7.605691 TGCTTCCTTCTTCAAATTCTAGAGAAG 59.394 37.037 11.45 11.45 37.48 2.85
4412 4869 8.414629 AAGTAAATCTGCTTCCTTCTTCAAAT 57.585 30.769 0.00 0.00 0.00 2.32
4491 4948 2.168106 GAGAGCAGCTCTTTCATCCTCA 59.832 50.000 26.11 0.00 41.35 3.86
4550 5007 0.038526 CTCGTAGGCCTGTTGACGTT 60.039 55.000 21.84 0.00 36.69 3.99
4608 5065 4.759183 CAGAAAGCCTACAAGAAGCTTCTT 59.241 41.667 31.56 31.56 45.77 2.52
4662 5130 9.239002 CTAGCACAGTAGTATTTCTATGTTGAC 57.761 37.037 0.00 0.00 0.00 3.18
4663 5131 8.967918 ACTAGCACAGTAGTATTTCTATGTTGA 58.032 33.333 0.00 0.00 34.98 3.18
4664 5132 9.025020 CACTAGCACAGTAGTATTTCTATGTTG 57.975 37.037 0.00 0.00 34.98 3.33
4665 5133 8.967918 TCACTAGCACAGTAGTATTTCTATGTT 58.032 33.333 0.00 0.00 34.98 2.71
4667 5135 8.625651 AGTCACTAGCACAGTAGTATTTCTATG 58.374 37.037 0.00 0.00 34.98 2.23
4668 5136 8.754991 AGTCACTAGCACAGTAGTATTTCTAT 57.245 34.615 0.00 0.00 34.98 1.98
4669 5137 9.676861 TTAGTCACTAGCACAGTAGTATTTCTA 57.323 33.333 0.00 0.00 34.98 2.10
4705 5205 7.982354 GCTAACCAGAAACACTACAGAATAGAT 59.018 37.037 0.00 0.00 0.00 1.98
4719 5219 6.260271 AGTTTCTTACACAGCTAACCAGAAAC 59.740 38.462 19.98 19.98 44.60 2.78
4733 5233 7.931275 AGACAAGGATTTTCAGTTTCTTACAC 58.069 34.615 0.00 0.00 0.00 2.90
4773 5273 7.497595 TGTACATGAAGAAGTACTTGTTCTGT 58.502 34.615 33.04 31.42 41.65 3.41
4845 5345 9.778741 TTATTACAATATGACTGAAGTCCATCC 57.221 33.333 7.96 0.00 44.15 3.51
4888 5388 6.602278 ACTAAGATAATAACAGAAAGGGGGC 58.398 40.000 0.00 0.00 0.00 5.80
4913 5413 5.885230 ATATCCATCGTACCAAATGCATG 57.115 39.130 0.00 0.00 0.00 4.06
4926 5426 2.586425 ACCAAGGCCAAATATCCATCG 58.414 47.619 5.01 0.00 0.00 3.84
4955 5455 1.294659 GACCAGCTCAAGCAACCGAG 61.295 60.000 4.59 0.00 45.16 4.63
4958 5458 0.312102 GTTGACCAGCTCAAGCAACC 59.688 55.000 4.59 0.00 45.16 3.77
4959 5459 1.312815 AGTTGACCAGCTCAAGCAAC 58.687 50.000 4.59 9.17 45.16 4.17
5042 5542 7.687941 ACCCATGTTTTGTACAGAGATAAAG 57.312 36.000 0.00 0.00 40.83 1.85
5043 5543 7.523052 GCAACCCATGTTTTGTACAGAGATAAA 60.523 37.037 0.00 0.00 40.83 1.40
5044 5544 6.072175 GCAACCCATGTTTTGTACAGAGATAA 60.072 38.462 0.00 0.00 40.83 1.75
5045 5545 5.414454 GCAACCCATGTTTTGTACAGAGATA 59.586 40.000 0.00 0.00 40.83 1.98
5096 5694 7.256048 CCAAAGGTAGATCATAACCCGTACATA 60.256 40.741 7.96 0.00 36.34 2.29
5123 5731 8.653036 AGTACTTAGTTGTAGGAACTTCTCAT 57.347 34.615 0.00 0.00 41.75 2.90
5165 5773 7.713518 TGATCAGTCATAGGAGGGACTATAAT 58.286 38.462 0.00 0.00 42.22 1.28
5167 5775 6.275855 ACTGATCAGTCATAGGAGGGACTATA 59.724 42.308 22.89 0.00 42.22 1.31
5196 5804 8.844244 GCATAAGAAATGAGTAATGAGGATGTT 58.156 33.333 0.00 0.00 0.00 2.71
5197 5805 8.216423 AGCATAAGAAATGAGTAATGAGGATGT 58.784 33.333 0.00 0.00 0.00 3.06
5198 5806 8.618702 AGCATAAGAAATGAGTAATGAGGATG 57.381 34.615 0.00 0.00 0.00 3.51
5199 5807 8.658619 AGAGCATAAGAAATGAGTAATGAGGAT 58.341 33.333 0.00 0.00 0.00 3.24
5200 5808 8.027524 AGAGCATAAGAAATGAGTAATGAGGA 57.972 34.615 0.00 0.00 0.00 3.71
5201 5809 8.674263 AAGAGCATAAGAAATGAGTAATGAGG 57.326 34.615 0.00 0.00 0.00 3.86
5314 5927 5.529430 TCAACCTGAAAGCGAAAGAACATTA 59.471 36.000 0.00 0.00 0.00 1.90
5317 5930 3.275143 TCAACCTGAAAGCGAAAGAACA 58.725 40.909 0.00 0.00 0.00 3.18
5324 5937 0.472471 AACCCTCAACCTGAAAGCGA 59.528 50.000 0.00 0.00 0.00 4.93
5326 5939 4.321974 CCATAAAACCCTCAACCTGAAAGC 60.322 45.833 0.00 0.00 0.00 3.51
5540 6153 1.745653 GCCTCTGAAGTTGTAATGGGC 59.254 52.381 0.00 0.00 0.00 5.36
5553 6166 0.473755 TTTTCAGGTGCTGCCTCTGA 59.526 50.000 15.00 15.00 46.96 3.27
5554 6167 0.879765 CTTTTCAGGTGCTGCCTCTG 59.120 55.000 11.50 11.50 46.96 3.35
5558 6171 1.807142 GTAGACTTTTCAGGTGCTGCC 59.193 52.381 0.00 0.00 37.58 4.85
5612 6225 1.334160 GGGTTGGTGGTAAAACAGGG 58.666 55.000 0.00 0.00 0.00 4.45
5636 6249 4.016444 CCTTTGGTTTAGCCTGCTTATGA 58.984 43.478 0.00 0.00 38.35 2.15
5648 6261 2.107552 ACTACCAGCTGCCTTTGGTTTA 59.892 45.455 15.97 0.50 45.16 2.01
5676 6289 3.817931 GCTGGGGTTATTTCTTTCTGGGT 60.818 47.826 0.00 0.00 0.00 4.51
5716 6329 5.112686 GCTTTACATCTACCACTTCTGGAG 58.887 45.833 0.00 0.00 40.55 3.86
5717 6330 4.530553 TGCTTTACATCTACCACTTCTGGA 59.469 41.667 0.00 0.00 40.55 3.86
5718 6331 4.832248 TGCTTTACATCTACCACTTCTGG 58.168 43.478 0.00 0.00 44.26 3.86
5719 6332 5.724328 TCTGCTTTACATCTACCACTTCTG 58.276 41.667 0.00 0.00 0.00 3.02
5720 6333 6.552445 ATCTGCTTTACATCTACCACTTCT 57.448 37.500 0.00 0.00 0.00 2.85
5721 6334 6.818644 TCAATCTGCTTTACATCTACCACTTC 59.181 38.462 0.00 0.00 0.00 3.01
5738 6351 4.240888 GAGCCTTTTCCTTTTCAATCTGC 58.759 43.478 0.00 0.00 0.00 4.26
5864 6477 2.610433 GCTTTGGCTATTTGCTCCAAC 58.390 47.619 0.00 0.00 39.36 3.77
5891 6504 4.646572 TCTTCTTCTTTCTTTCCTCAGCC 58.353 43.478 0.00 0.00 0.00 4.85
5909 6522 2.487372 CTGAGCCTTTTCTGCCTTCTTC 59.513 50.000 0.00 0.00 0.00 2.87
5921 6534 1.303643 CGCCCTTTCCTGAGCCTTT 60.304 57.895 0.00 0.00 0.00 3.11
5951 6564 0.610174 TCATCTCAGCTTCCTTGCGT 59.390 50.000 0.00 0.00 38.13 5.24
5996 6609 2.093288 TGAGCTCTAACATGAAGGCAGG 60.093 50.000 16.19 0.00 0.00 4.85
6020 6634 5.070446 TGGGCAGTACAGTATATCAAGAAGG 59.930 44.000 0.00 0.00 0.00 3.46
6028 6642 4.224147 TGTTGTGTGGGCAGTACAGTATAT 59.776 41.667 0.00 0.00 0.00 0.86
6031 6645 1.763545 TGTTGTGTGGGCAGTACAGTA 59.236 47.619 0.00 0.00 0.00 2.74
6034 6648 2.130272 TTTGTTGTGTGGGCAGTACA 57.870 45.000 0.00 0.00 0.00 2.90
6035 6649 3.726291 AATTTGTTGTGTGGGCAGTAC 57.274 42.857 0.00 0.00 0.00 2.73
6082 6697 4.036144 AGACTTCTTTGCTTTCTTCTGCAC 59.964 41.667 0.00 0.00 39.05 4.57
6131 6746 1.294659 GCTCTCGCCACTTGTCAAGG 61.295 60.000 16.85 2.08 0.00 3.61
6135 6750 0.601311 AGTTGCTCTCGCCACTTGTC 60.601 55.000 0.00 0.00 38.86 3.18
6136 6751 0.601311 GAGTTGCTCTCGCCACTTGT 60.601 55.000 0.00 0.00 41.68 3.16
6169 6784 1.002033 GTTGCTTTCAGTGTCTGCTGG 60.002 52.381 0.00 0.00 37.12 4.85
6468 7083 4.202441 GGCTGTGGATGAAGAATATGTGT 58.798 43.478 0.00 0.00 0.00 3.72
6549 7164 0.538584 CATGTCTAGCCAGAGCACCA 59.461 55.000 0.00 0.00 43.56 4.17
6580 7195 1.541147 CAGCATCCACGGTTCAAACAT 59.459 47.619 0.00 0.00 0.00 2.71
6598 7213 9.886132 ATGAGGTAAATAGGTACAGTAAAACAG 57.114 33.333 0.00 0.00 0.00 3.16
6737 7352 5.013704 ACAACAGATAACCATAACCACCAGA 59.986 40.000 0.00 0.00 0.00 3.86
6765 7385 6.677781 TGCAGTAATATAAAACACAGAGGC 57.322 37.500 0.00 0.00 0.00 4.70
6811 7479 4.463539 AGCATGTGATTCCAGCAAAATGTA 59.536 37.500 0.00 0.00 0.00 2.29
6837 7505 0.839946 ATGGTTTCTCCGGCTAGCAT 59.160 50.000 18.24 0.00 39.52 3.79
6840 7508 2.487934 CATGATGGTTTCTCCGGCTAG 58.512 52.381 0.00 0.00 39.52 3.42
6881 7549 7.554476 GGCCTATATATAAAAGAGCAAGGGAAG 59.446 40.741 0.00 0.00 0.00 3.46
7058 7738 1.743772 CGGTTGGCAGGGATAAGTCTG 60.744 57.143 0.00 0.00 0.00 3.51
7102 7782 4.019174 AGTAATTCCGAACGAAGGGAGTA 58.981 43.478 0.00 0.00 32.78 2.59
7107 7787 4.243270 AGACAAGTAATTCCGAACGAAGG 58.757 43.478 0.00 0.00 32.78 3.46
7108 7788 4.030306 CGAGACAAGTAATTCCGAACGAAG 59.970 45.833 0.00 0.00 32.78 3.79
7109 7789 3.916172 CGAGACAAGTAATTCCGAACGAA 59.084 43.478 0.00 0.00 34.14 3.85
7110 7790 3.189080 TCGAGACAAGTAATTCCGAACGA 59.811 43.478 0.00 0.00 0.00 3.85
7111 7791 3.495193 TCGAGACAAGTAATTCCGAACG 58.505 45.455 0.00 0.00 0.00 3.95
7112 7792 5.834239 TTTCGAGACAAGTAATTCCGAAC 57.166 39.130 0.00 0.00 34.86 3.95
7113 7793 6.425721 ACATTTTCGAGACAAGTAATTCCGAA 59.574 34.615 0.00 0.00 33.57 4.30
7114 7794 5.929992 ACATTTTCGAGACAAGTAATTCCGA 59.070 36.000 0.00 0.00 0.00 4.55
7115 7795 6.165659 ACATTTTCGAGACAAGTAATTCCG 57.834 37.500 0.00 0.00 0.00 4.30
7116 7796 8.665685 ACATACATTTTCGAGACAAGTAATTCC 58.334 33.333 0.00 0.00 0.00 3.01
7155 7835 9.664332 GCAGAAATGGATGTATCTAGACATATT 57.336 33.333 0.00 0.00 40.18 1.28
7156 7836 7.978414 CGCAGAAATGGATGTATCTAGACATAT 59.022 37.037 0.00 0.00 40.18 1.78
7157 7837 7.176690 TCGCAGAAATGGATGTATCTAGACATA 59.823 37.037 0.00 0.00 40.18 2.29
7158 7838 6.015095 TCGCAGAAATGGATGTATCTAGACAT 60.015 38.462 0.00 0.00 42.82 3.06
7159 7839 5.301805 TCGCAGAAATGGATGTATCTAGACA 59.698 40.000 0.00 0.00 0.00 3.41
7160 7840 5.631512 GTCGCAGAAATGGATGTATCTAGAC 59.368 44.000 0.00 0.00 39.69 2.59
7161 7841 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
7162 7842 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
7163 7843 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
7164 7844 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
7165 7845 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
7166 7846 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
7167 7847 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
7168 7848 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
7169 7849 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
7170 7850 6.515272 AAATTACTTGTCGCAGAAATGGAT 57.485 33.333 0.00 0.00 39.69 3.41
7171 7851 5.390461 CGAAATTACTTGTCGCAGAAATGGA 60.390 40.000 0.00 0.00 39.69 3.41
7172 7852 4.788100 CGAAATTACTTGTCGCAGAAATGG 59.212 41.667 0.00 0.00 39.69 3.16
7173 7853 5.617609 TCGAAATTACTTGTCGCAGAAATG 58.382 37.500 0.00 0.00 39.69 2.32
7174 7854 5.856126 TCGAAATTACTTGTCGCAGAAAT 57.144 34.783 0.00 0.00 39.69 2.17
7175 7855 5.437263 GTTCGAAATTACTTGTCGCAGAAA 58.563 37.500 0.00 0.00 39.69 2.52
7176 7856 4.375606 CGTTCGAAATTACTTGTCGCAGAA 60.376 41.667 0.00 0.00 39.69 3.02
7177 7857 3.120616 CGTTCGAAATTACTTGTCGCAGA 59.879 43.478 0.00 0.00 34.80 4.26
7178 7858 3.395671 CGTTCGAAATTACTTGTCGCAG 58.604 45.455 0.00 0.00 34.80 5.18
7179 7859 2.156117 CCGTTCGAAATTACTTGTCGCA 59.844 45.455 0.00 0.00 34.80 5.10
7180 7860 2.409378 TCCGTTCGAAATTACTTGTCGC 59.591 45.455 0.00 0.00 34.80 5.19
7181 7861 3.060363 CCTCCGTTCGAAATTACTTGTCG 59.940 47.826 0.00 0.00 36.12 4.35
7182 7862 3.370061 CCCTCCGTTCGAAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
7183 7863 3.007182 TCCCTCCGTTCGAAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
7184 7864 3.592059 TCCCTCCGTTCGAAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
7185 7865 3.260128 ACTCCCTCCGTTCGAAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
7186 7866 2.830321 ACTCCCTCCGTTCGAAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
7187 7867 3.242549 ACTCCCTCCGTTCGAAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
7188 7868 3.512724 AGAACTCCCTCCGTTCGAAATTA 59.487 43.478 0.00 0.00 44.08 1.40
7189 7869 2.302157 AGAACTCCCTCCGTTCGAAATT 59.698 45.455 0.00 0.00 44.08 1.82
7190 7870 1.900486 AGAACTCCCTCCGTTCGAAAT 59.100 47.619 0.00 0.00 44.08 2.17
7191 7871 1.271656 GAGAACTCCCTCCGTTCGAAA 59.728 52.381 0.00 0.00 44.08 3.46
7192 7872 0.886563 GAGAACTCCCTCCGTTCGAA 59.113 55.000 0.00 0.00 44.08 3.71
7193 7873 0.251033 TGAGAACTCCCTCCGTTCGA 60.251 55.000 0.00 0.00 44.08 3.71
7194 7874 0.601558 TTGAGAACTCCCTCCGTTCG 59.398 55.000 0.00 0.00 44.08 3.95
7195 7875 3.181474 CCTATTGAGAACTCCCTCCGTTC 60.181 52.174 0.00 0.00 40.72 3.95
7196 7876 2.766828 CCTATTGAGAACTCCCTCCGTT 59.233 50.000 0.00 0.00 32.32 4.44
7197 7877 2.389715 CCTATTGAGAACTCCCTCCGT 58.610 52.381 0.00 0.00 32.32 4.69
7198 7878 1.689273 CCCTATTGAGAACTCCCTCCG 59.311 57.143 0.00 0.00 32.32 4.63
7199 7879 2.765502 ACCCTATTGAGAACTCCCTCC 58.234 52.381 0.00 0.00 32.32 4.30
7200 7880 6.502074 AAATACCCTATTGAGAACTCCCTC 57.498 41.667 0.00 0.00 0.00 4.30
7201 7881 6.559157 CCTAAATACCCTATTGAGAACTCCCT 59.441 42.308 0.00 0.00 29.49 4.20
7202 7882 6.557633 TCCTAAATACCCTATTGAGAACTCCC 59.442 42.308 0.00 0.00 29.49 4.30
7203 7883 7.509659 TCTCCTAAATACCCTATTGAGAACTCC 59.490 40.741 0.00 0.00 29.49 3.85
7204 7884 8.480133 TCTCCTAAATACCCTATTGAGAACTC 57.520 38.462 0.00 0.00 29.49 3.01
7205 7885 8.068733 ACTCTCCTAAATACCCTATTGAGAACT 58.931 37.037 0.00 0.00 29.49 3.01
7206 7886 8.145122 CACTCTCCTAAATACCCTATTGAGAAC 58.855 40.741 0.00 0.00 29.49 3.01
7207 7887 8.065627 TCACTCTCCTAAATACCCTATTGAGAA 58.934 37.037 0.00 0.00 29.49 2.87
7208 7888 7.506261 GTCACTCTCCTAAATACCCTATTGAGA 59.494 40.741 0.00 0.00 29.49 3.27
7209 7889 7.522399 CGTCACTCTCCTAAATACCCTATTGAG 60.522 44.444 0.00 0.00 0.00 3.02
7210 7890 6.264744 CGTCACTCTCCTAAATACCCTATTGA 59.735 42.308 0.00 0.00 0.00 2.57
7211 7891 6.448006 CGTCACTCTCCTAAATACCCTATTG 58.552 44.000 0.00 0.00 0.00 1.90
7212 7892 5.539193 CCGTCACTCTCCTAAATACCCTATT 59.461 44.000 0.00 0.00 0.00 1.73
7213 7893 5.078256 CCGTCACTCTCCTAAATACCCTAT 58.922 45.833 0.00 0.00 0.00 2.57
7214 7894 4.467769 CCGTCACTCTCCTAAATACCCTA 58.532 47.826 0.00 0.00 0.00 3.53
7215 7895 3.297736 CCGTCACTCTCCTAAATACCCT 58.702 50.000 0.00 0.00 0.00 4.34
7216 7896 2.364647 CCCGTCACTCTCCTAAATACCC 59.635 54.545 0.00 0.00 0.00 3.69
7217 7897 2.364647 CCCCGTCACTCTCCTAAATACC 59.635 54.545 0.00 0.00 0.00 2.73
7218 7898 3.294214 TCCCCGTCACTCTCCTAAATAC 58.706 50.000 0.00 0.00 0.00 1.89
7219 7899 3.203710 TCTCCCCGTCACTCTCCTAAATA 59.796 47.826 0.00 0.00 0.00 1.40
7220 7900 2.024273 TCTCCCCGTCACTCTCCTAAAT 60.024 50.000 0.00 0.00 0.00 1.40
7221 7901 1.356738 TCTCCCCGTCACTCTCCTAAA 59.643 52.381 0.00 0.00 0.00 1.85
7222 7902 0.997363 TCTCCCCGTCACTCTCCTAA 59.003 55.000 0.00 0.00 0.00 2.69
7223 7903 0.547075 CTCTCCCCGTCACTCTCCTA 59.453 60.000 0.00 0.00 0.00 2.94
7224 7904 1.304952 CTCTCCCCGTCACTCTCCT 59.695 63.158 0.00 0.00 0.00 3.69
7225 7905 2.419739 GCTCTCCCCGTCACTCTCC 61.420 68.421 0.00 0.00 0.00 3.71
7226 7906 2.419739 GGCTCTCCCCGTCACTCTC 61.420 68.421 0.00 0.00 0.00 3.20
7227 7907 2.363147 GGCTCTCCCCGTCACTCT 60.363 66.667 0.00 0.00 0.00 3.24
7228 7908 2.680352 TGGCTCTCCCCGTCACTC 60.680 66.667 0.00 0.00 0.00 3.51
7229 7909 2.681778 CTGGCTCTCCCCGTCACT 60.682 66.667 0.00 0.00 0.00 3.41
7230 7910 3.775654 CCTGGCTCTCCCCGTCAC 61.776 72.222 0.00 0.00 0.00 3.67
7231 7911 3.539593 TTCCTGGCTCTCCCCGTCA 62.540 63.158 0.00 0.00 0.00 4.35
7232 7912 2.683933 TTCCTGGCTCTCCCCGTC 60.684 66.667 0.00 0.00 0.00 4.79
7233 7913 3.003763 GTTCCTGGCTCTCCCCGT 61.004 66.667 0.00 0.00 0.00 5.28
7234 7914 4.148825 CGTTCCTGGCTCTCCCCG 62.149 72.222 0.00 0.00 0.00 5.73
7235 7915 4.475135 GCGTTCCTGGCTCTCCCC 62.475 72.222 0.00 0.00 0.00 4.81
7236 7916 4.821589 CGCGTTCCTGGCTCTCCC 62.822 72.222 0.00 0.00 0.00 4.30
7238 7918 4.742201 TGCGCGTTCCTGGCTCTC 62.742 66.667 8.43 0.00 0.00 3.20
7239 7919 4.749310 CTGCGCGTTCCTGGCTCT 62.749 66.667 8.43 0.00 0.00 4.09
7281 7961 4.493747 GTTCCTCCCGTCGCCTCG 62.494 72.222 0.00 0.00 0.00 4.63
7282 7962 4.144703 GGTTCCTCCCGTCGCCTC 62.145 72.222 0.00 0.00 0.00 4.70
7291 7971 4.893601 GCGCGCTAGGGTTCCTCC 62.894 72.222 26.67 0.00 34.61 4.30
7292 7972 3.839432 AGCGCGCTAGGGTTCCTC 61.839 66.667 35.79 0.00 34.61 3.71
7293 7973 4.148825 CAGCGCGCTAGGGTTCCT 62.149 66.667 36.02 5.36 37.71 3.36
7307 7987 3.435186 GAAGGAGTTGGCGGCAGC 61.435 66.667 18.25 18.25 44.18 5.25
7308 7988 2.747855 GGAAGGAGTTGGCGGCAG 60.748 66.667 12.87 0.00 0.00 4.85
7309 7989 4.344865 GGGAAGGAGTTGGCGGCA 62.345 66.667 7.97 7.97 0.00 5.69
7311 7991 3.646715 TGGGGAAGGAGTTGGCGG 61.647 66.667 0.00 0.00 0.00 6.13
7312 7992 2.359975 GTGGGGAAGGAGTTGGCG 60.360 66.667 0.00 0.00 0.00 5.69
7313 7993 2.035783 GGTGGGGAAGGAGTTGGC 59.964 66.667 0.00 0.00 0.00 4.52
7314 7994 2.763902 GGGTGGGGAAGGAGTTGG 59.236 66.667 0.00 0.00 0.00 3.77
7315 7995 1.852626 AGGGGTGGGGAAGGAGTTG 60.853 63.158 0.00 0.00 0.00 3.16
7316 7996 1.541620 GAGGGGTGGGGAAGGAGTT 60.542 63.158 0.00 0.00 0.00 3.01
7317 7997 2.125225 GAGGGGTGGGGAAGGAGT 59.875 66.667 0.00 0.00 0.00 3.85
7318 7998 2.692741 GGAGGGGTGGGGAAGGAG 60.693 72.222 0.00 0.00 0.00 3.69
7319 7999 3.216371 AGGAGGGGTGGGGAAGGA 61.216 66.667 0.00 0.00 0.00 3.36
7320 8000 2.692741 GAGGAGGGGTGGGGAAGG 60.693 72.222 0.00 0.00 0.00 3.46
7321 8001 2.692741 GGAGGAGGGGTGGGGAAG 60.693 72.222 0.00 0.00 0.00 3.46
7322 8002 3.216371 AGGAGGAGGGGTGGGGAA 61.216 66.667 0.00 0.00 0.00 3.97
7323 8003 3.695825 GAGGAGGAGGGGTGGGGA 61.696 72.222 0.00 0.00 0.00 4.81
7324 8004 4.825679 GGAGGAGGAGGGGTGGGG 62.826 77.778 0.00 0.00 0.00 4.96
7325 8005 4.825679 GGGAGGAGGAGGGGTGGG 62.826 77.778 0.00 0.00 0.00 4.61
7326 8006 3.700350 AGGGAGGAGGAGGGGTGG 61.700 72.222 0.00 0.00 0.00 4.61
7327 8007 2.041405 GAGGGAGGAGGAGGGGTG 60.041 72.222 0.00 0.00 0.00 4.61
7328 8008 3.756783 CGAGGGAGGAGGAGGGGT 61.757 72.222 0.00 0.00 0.00 4.95
7330 8010 4.150454 AGCGAGGGAGGAGGAGGG 62.150 72.222 0.00 0.00 0.00 4.30
7331 8011 2.837291 CAGCGAGGGAGGAGGAGG 60.837 72.222 0.00 0.00 0.00 4.30
7332 8012 3.535962 GCAGCGAGGGAGGAGGAG 61.536 72.222 0.00 0.00 0.00 3.69
7397 8077 2.835895 GGGAGACGAGGAGGCCTC 60.836 72.222 25.59 25.59 46.44 4.70
7398 8078 4.467107 GGGGAGACGAGGAGGCCT 62.467 72.222 3.86 3.86 36.03 5.19
7399 8079 4.467107 AGGGGAGACGAGGAGGCC 62.467 72.222 0.00 0.00 0.00 5.19
7400 8080 2.835895 GAGGGGAGACGAGGAGGC 60.836 72.222 0.00 0.00 0.00 4.70
7401 8081 2.123640 GGAGGGGAGACGAGGAGG 60.124 72.222 0.00 0.00 0.00 4.30
7402 8082 2.123640 GGGAGGGGAGACGAGGAG 60.124 72.222 0.00 0.00 0.00 3.69
7403 8083 2.944954 TGGGAGGGGAGACGAGGA 60.945 66.667 0.00 0.00 0.00 3.71
7404 8084 2.443016 CTGGGAGGGGAGACGAGG 60.443 72.222 0.00 0.00 0.00 4.63
7405 8085 3.151022 GCTGGGAGGGGAGACGAG 61.151 72.222 0.00 0.00 0.00 4.18



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.