Multiple sequence alignment - TraesCS5A01G269300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G269300 chr5A 100.000 5884 0 0 1 5884 480171711 480177594 0.000000e+00 10866.0
1 TraesCS5A01G269300 chr5A 83.246 382 46 12 400 776 480141243 480141611 9.450000e-88 335.0
2 TraesCS5A01G269300 chr5A 77.544 285 51 10 2454 2735 106732679 106732405 6.100000e-35 159.0
3 TraesCS5A01G269300 chr5A 84.800 125 12 4 653 776 480128609 480128727 1.040000e-22 119.0
4 TraesCS5A01G269300 chr5D 89.849 3842 248 61 326 4108 379571853 379575611 0.000000e+00 4804.0
5 TraesCS5A01G269300 chr5D 88.566 1583 75 40 4112 5631 379575724 379577263 0.000000e+00 1823.0
6 TraesCS5A01G269300 chr5D 92.378 328 19 2 1 323 424889993 424889667 4.150000e-126 462.0
7 TraesCS5A01G269300 chr5D 85.275 455 49 9 326 776 379563446 379563886 2.500000e-123 453.0
8 TraesCS5A01G269300 chr5D 84.835 455 51 10 326 776 379561659 379562099 5.410000e-120 442.0
9 TraesCS5A01G269300 chr5D 82.051 468 49 16 326 776 379567362 379567811 3.350000e-97 366.0
10 TraesCS5A01G269300 chr5D 81.935 465 55 18 326 776 379569570 379570019 3.350000e-97 366.0
11 TraesCS5A01G269300 chr5D 81.505 465 44 23 5369 5792 379580423 379580886 1.570000e-90 344.0
12 TraesCS5A01G269300 chr5D 93.130 131 8 1 5627 5757 379577996 379578125 2.160000e-44 191.0
13 TraesCS5A01G269300 chr5B 89.055 2074 126 42 338 2366 455505344 455507361 0.000000e+00 2479.0
14 TraesCS5A01G269300 chr5B 91.825 1370 53 23 2946 4261 455508152 455509516 0.000000e+00 1855.0
15 TraesCS5A01G269300 chr5B 86.815 1570 97 48 4270 5792 455509560 455511066 0.000000e+00 1652.0
16 TraesCS5A01G269300 chr5B 88.795 473 41 4 2480 2948 455507380 455507844 2.380000e-158 569.0
17 TraesCS5A01G269300 chr5B 80.059 341 46 13 444 776 455499552 455499878 3.550000e-57 233.0
18 TraesCS5A01G269300 chr5B 84.375 96 10 2 681 776 455497395 455497485 8.120000e-14 89.8
19 TraesCS5A01G269300 chr5B 94.231 52 3 0 725 776 455503270 455503321 4.890000e-11 80.5
20 TraesCS5A01G269300 chr7D 83.412 844 122 12 1074 1917 217997269 217998094 0.000000e+00 767.0
21 TraesCS5A01G269300 chr7D 85.876 177 25 0 2105 2281 217998388 217998564 7.780000e-44 189.0
22 TraesCS5A01G269300 chr7D 94.643 56 2 1 2656 2710 13379874 13379929 1.050000e-12 86.1
23 TraesCS5A01G269300 chr7B 83.255 848 116 15 1074 1917 181686175 181685350 0.000000e+00 756.0
24 TraesCS5A01G269300 chr7B 85.632 174 25 0 2108 2281 181685066 181684893 3.620000e-42 183.0
25 TraesCS5A01G269300 chr7A 82.898 842 126 13 1076 1917 230862763 230863586 0.000000e+00 741.0
26 TraesCS5A01G269300 chr7A 92.683 328 20 3 1 327 512767888 512767564 2.480000e-128 470.0
27 TraesCS5A01G269300 chr7A 93.146 321 18 2 1 320 11789881 11790198 8.930000e-128 468.0
28 TraesCS5A01G269300 chr7A 92.683 328 19 1 1 323 712428954 712428627 8.930000e-128 468.0
29 TraesCS5A01G269300 chr7A 85.876 177 25 0 2105 2281 230863870 230864046 7.780000e-44 189.0
30 TraesCS5A01G269300 chr2A 93.808 323 20 0 1 323 2533445 2533123 2.460000e-133 486.0
31 TraesCS5A01G269300 chr3A 93.252 326 16 2 1 320 613350283 613350608 5.340000e-130 475.0
32 TraesCS5A01G269300 chr3A 93.252 326 16 2 1 320 613364653 613364978 5.340000e-130 475.0
33 TraesCS5A01G269300 chr3A 100.000 29 0 0 2546 2574 111566332 111566360 3.000000e-03 54.7
34 TraesCS5A01G269300 chr6B 92.923 325 17 5 1 320 16073989 16074312 8.930000e-128 468.0
35 TraesCS5A01G269300 chr6B 92.049 327 24 2 1 326 95755572 95755897 5.370000e-125 459.0
36 TraesCS5A01G269300 chr3D 86.364 88 8 4 2654 2737 86908504 86908591 6.280000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G269300 chr5A 480171711 480177594 5883 False 10866.000000 10866 100.000000 1 5884 1 chr5A.!!$F3 5883
1 TraesCS5A01G269300 chr5D 379561659 379580886 19227 False 1098.625000 4804 85.893250 326 5792 8 chr5D.!!$F1 5466
2 TraesCS5A01G269300 chr5B 455497395 455511066 13671 False 994.042857 2479 87.879286 338 5792 7 chr5B.!!$F1 5454
3 TraesCS5A01G269300 chr7D 217997269 217998564 1295 False 478.000000 767 84.644000 1074 2281 2 chr7D.!!$F2 1207
4 TraesCS5A01G269300 chr7B 181684893 181686175 1282 True 469.500000 756 84.443500 1074 2281 2 chr7B.!!$R1 1207
5 TraesCS5A01G269300 chr7A 230862763 230864046 1283 False 465.000000 741 84.387000 1076 2281 2 chr7A.!!$F2 1205

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
80 81 0.103937 CTCTGTCCTCGGCTCAATCC 59.896 60.0 0.00 0.00 0.00 3.01 F
391 2495 0.108377 AACGCGTCTACATGCATCCA 60.108 50.0 14.44 0.00 33.65 3.41 F
513 10212 0.250038 CACATATCTGGACGCCTGGG 60.250 60.0 0.00 0.00 0.00 4.45 F
1464 13496 0.974383 AGATCGTTTCCCAGGTCGTT 59.026 50.0 0.00 0.00 0.00 3.85 F
2499 14671 0.468029 CAGGCAGGGTGGAACAAACT 60.468 55.0 0.00 0.00 44.16 2.66 F
2821 14999 0.322816 TGCAGGATCCAACTTGCCTC 60.323 55.0 15.82 0.00 41.15 4.70 F
4023 16560 0.764890 TCAGACCCTGGTCCTTTGTG 59.235 55.0 12.66 4.64 45.59 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1990 14033 1.236628 ACACAAGAGACGTCGTAGCT 58.763 50.000 10.46 3.73 0.00 3.32 R
2106 14274 2.278330 CCCCTGCAGCCTTCCAAAC 61.278 63.158 8.66 0.00 0.00 2.93 R
2459 14631 0.577269 GGGAATGATCGTTTCGCTCG 59.423 55.000 14.34 0.00 34.30 5.03 R
2802 14980 0.322816 GAGGCAAGTTGGATCCTGCA 60.323 55.000 21.42 0.86 0.00 4.41 R
3313 15817 0.519519 TACTGTGCAAAATTCGGCGG 59.480 50.000 7.21 0.00 0.00 6.13 R
4224 16870 0.666913 CAAGCCCTATGCATGACAGC 59.333 55.000 10.16 7.08 41.13 4.40 R
5165 17903 0.107643 TGTGCGGGACAACATCAAGA 59.892 50.000 0.00 0.00 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.986477 AATTAATGACTCTTCAATTTTTCCCG 57.014 30.769 0.00 0.00 34.61 5.14
32 33 7.753309 TTAATGACTCTTCAATTTTTCCCGA 57.247 32.000 0.00 0.00 34.61 5.14
34 35 5.432885 TGACTCTTCAATTTTTCCCGAAC 57.567 39.130 0.00 0.00 0.00 3.95
35 36 4.884744 TGACTCTTCAATTTTTCCCGAACA 59.115 37.500 0.00 0.00 0.00 3.18
36 37 5.008613 TGACTCTTCAATTTTTCCCGAACAG 59.991 40.000 0.00 0.00 0.00 3.16
37 38 4.229876 CTCTTCAATTTTTCCCGAACAGC 58.770 43.478 0.00 0.00 0.00 4.40
39 40 4.098654 TCTTCAATTTTTCCCGAACAGCAA 59.901 37.500 0.00 0.00 0.00 3.91
41 42 4.759782 TCAATTTTTCCCGAACAGCAAAA 58.240 34.783 0.00 0.00 0.00 2.44
45 46 7.659390 TCAATTTTTCCCGAACAGCAAAAATAT 59.341 29.630 0.00 0.00 37.42 1.28
47 48 8.702163 ATTTTTCCCGAACAGCAAAAATATAG 57.298 30.769 0.00 0.00 36.91 1.31
51 52 5.941058 TCCCGAACAGCAAAAATATAGACAA 59.059 36.000 0.00 0.00 0.00 3.18
52 53 6.027749 CCCGAACAGCAAAAATATAGACAAC 58.972 40.000 0.00 0.00 0.00 3.32
53 54 5.732647 CCGAACAGCAAAAATATAGACAACG 59.267 40.000 0.00 0.00 0.00 4.10
54 55 6.304126 CGAACAGCAAAAATATAGACAACGT 58.696 36.000 0.00 0.00 0.00 3.99
55 56 6.246332 CGAACAGCAAAAATATAGACAACGTG 59.754 38.462 0.00 0.00 0.00 4.49
56 57 5.390613 ACAGCAAAAATATAGACAACGTGC 58.609 37.500 0.00 0.00 0.00 5.34
57 58 5.049060 ACAGCAAAAATATAGACAACGTGCA 60.049 36.000 0.00 0.00 31.95 4.57
58 59 6.029607 CAGCAAAAATATAGACAACGTGCAT 58.970 36.000 0.00 0.00 31.95 3.96
59 60 7.148323 ACAGCAAAAATATAGACAACGTGCATA 60.148 33.333 0.00 0.00 31.95 3.14
60 61 7.374228 CAGCAAAAATATAGACAACGTGCATAG 59.626 37.037 0.00 0.00 31.95 2.23
62 63 7.409697 CAAAAATATAGACAACGTGCATAGCT 58.590 34.615 0.00 0.00 0.00 3.32
63 64 6.771188 AAATATAGACAACGTGCATAGCTC 57.229 37.500 0.00 0.00 0.00 4.09
64 65 5.713792 ATATAGACAACGTGCATAGCTCT 57.286 39.130 0.00 0.00 0.00 4.09
66 67 1.273606 AGACAACGTGCATAGCTCTGT 59.726 47.619 0.00 0.00 0.00 3.41
67 68 1.656095 GACAACGTGCATAGCTCTGTC 59.344 52.381 0.00 0.00 0.00 3.51
71 72 0.593518 CGTGCATAGCTCTGTCCTCG 60.594 60.000 0.00 0.00 0.00 4.63
73 74 1.300542 GCATAGCTCTGTCCTCGGC 60.301 63.158 0.00 0.00 0.00 5.54
74 75 1.743321 GCATAGCTCTGTCCTCGGCT 61.743 60.000 0.00 0.00 38.62 5.52
75 76 0.313672 CATAGCTCTGTCCTCGGCTC 59.686 60.000 0.00 0.00 36.40 4.70
78 79 0.975040 AGCTCTGTCCTCGGCTCAAT 60.975 55.000 0.00 0.00 0.00 2.57
79 80 0.529555 GCTCTGTCCTCGGCTCAATC 60.530 60.000 0.00 0.00 0.00 2.67
80 81 0.103937 CTCTGTCCTCGGCTCAATCC 59.896 60.000 0.00 0.00 0.00 3.01
82 83 2.107141 GTCCTCGGCTCAATCCCG 59.893 66.667 0.00 0.00 46.88 5.14
85 86 2.125147 CTCGGCTCAATCCCGCAA 60.125 61.111 0.00 0.00 45.19 4.85
86 87 2.435938 TCGGCTCAATCCCGCAAC 60.436 61.111 0.00 0.00 45.19 4.17
87 88 3.508840 CGGCTCAATCCCGCAACC 61.509 66.667 0.00 0.00 39.22 3.77
89 90 3.508840 GCTCAATCCCGCAACCCG 61.509 66.667 0.00 0.00 0.00 5.28
90 91 3.508840 CTCAATCCCGCAACCCGC 61.509 66.667 0.00 0.00 35.03 6.13
119 120 3.591835 GCGAGCGAGGAGGAGGAG 61.592 72.222 0.00 0.00 0.00 3.69
120 121 3.591835 CGAGCGAGGAGGAGGAGC 61.592 72.222 0.00 0.00 0.00 4.70
121 122 3.591835 GAGCGAGGAGGAGGAGCG 61.592 72.222 0.00 0.00 0.00 5.03
134 135 4.477975 GAGCGCGCGTGTAGGTCT 62.478 66.667 32.35 17.82 0.00 3.85
135 136 3.966026 GAGCGCGCGTGTAGGTCTT 62.966 63.158 32.35 3.04 0.00 3.01
136 137 3.542742 GCGCGCGTGTAGGTCTTC 61.543 66.667 32.35 6.30 0.00 2.87
137 138 2.178521 CGCGCGTGTAGGTCTTCT 59.821 61.111 24.19 0.00 0.00 2.85
138 139 1.868251 CGCGCGTGTAGGTCTTCTC 60.868 63.158 24.19 0.00 0.00 2.87
139 140 1.507174 GCGCGTGTAGGTCTTCTCT 59.493 57.895 8.43 0.00 0.00 3.10
140 141 0.109226 GCGCGTGTAGGTCTTCTCTT 60.109 55.000 8.43 0.00 0.00 2.85
141 142 1.897641 CGCGTGTAGGTCTTCTCTTC 58.102 55.000 0.00 0.00 0.00 2.87
142 143 1.469308 CGCGTGTAGGTCTTCTCTTCT 59.531 52.381 0.00 0.00 0.00 2.85
143 144 2.476519 CGCGTGTAGGTCTTCTCTTCTC 60.477 54.545 0.00 0.00 0.00 2.87
144 145 2.488545 GCGTGTAGGTCTTCTCTTCTCA 59.511 50.000 0.00 0.00 0.00 3.27
145 146 3.129638 GCGTGTAGGTCTTCTCTTCTCAT 59.870 47.826 0.00 0.00 0.00 2.90
146 147 4.667262 CGTGTAGGTCTTCTCTTCTCATG 58.333 47.826 0.00 0.00 0.00 3.07
147 148 4.429108 GTGTAGGTCTTCTCTTCTCATGC 58.571 47.826 0.00 0.00 0.00 4.06
148 149 4.159506 GTGTAGGTCTTCTCTTCTCATGCT 59.840 45.833 0.00 0.00 0.00 3.79
149 150 4.400884 TGTAGGTCTTCTCTTCTCATGCTC 59.599 45.833 0.00 0.00 0.00 4.26
150 151 3.439154 AGGTCTTCTCTTCTCATGCTCA 58.561 45.455 0.00 0.00 0.00 4.26
151 152 4.032310 AGGTCTTCTCTTCTCATGCTCAT 58.968 43.478 0.00 0.00 0.00 2.90
152 153 5.207354 AGGTCTTCTCTTCTCATGCTCATA 58.793 41.667 0.00 0.00 0.00 2.15
153 154 5.068987 AGGTCTTCTCTTCTCATGCTCATAC 59.931 44.000 0.00 0.00 0.00 2.39
155 156 6.336566 GTCTTCTCTTCTCATGCTCATACAA 58.663 40.000 0.00 0.00 0.00 2.41
156 157 6.476380 GTCTTCTCTTCTCATGCTCATACAAG 59.524 42.308 0.00 0.00 0.00 3.16
157 158 5.929058 TCTCTTCTCATGCTCATACAAGT 57.071 39.130 0.00 0.00 0.00 3.16
158 159 5.658468 TCTCTTCTCATGCTCATACAAGTG 58.342 41.667 0.00 0.00 0.00 3.16
159 160 4.763073 TCTTCTCATGCTCATACAAGTGG 58.237 43.478 0.00 0.00 0.00 4.00
161 162 5.422012 TCTTCTCATGCTCATACAAGTGGTA 59.578 40.000 0.00 0.00 36.16 3.25
162 163 5.268118 TCTCATGCTCATACAAGTGGTAG 57.732 43.478 0.00 0.00 34.92 3.18
163 164 4.956075 TCTCATGCTCATACAAGTGGTAGA 59.044 41.667 0.00 0.00 34.92 2.59
164 165 5.422012 TCTCATGCTCATACAAGTGGTAGAA 59.578 40.000 0.00 0.00 34.92 2.10
165 166 5.664457 TCATGCTCATACAAGTGGTAGAAG 58.336 41.667 0.00 0.00 34.92 2.85
167 168 5.330455 TGCTCATACAAGTGGTAGAAGAG 57.670 43.478 0.00 0.00 34.92 2.85
168 169 4.116238 GCTCATACAAGTGGTAGAAGAGC 58.884 47.826 11.55 11.55 42.60 4.09
169 170 4.142049 GCTCATACAAGTGGTAGAAGAGCT 60.142 45.833 16.53 0.00 44.01 4.09
170 171 5.584253 TCATACAAGTGGTAGAAGAGCTC 57.416 43.478 5.27 5.27 34.92 4.09
171 172 5.016831 TCATACAAGTGGTAGAAGAGCTCA 58.983 41.667 17.77 0.00 34.92 4.26
173 174 2.300437 ACAAGTGGTAGAAGAGCTCACC 59.700 50.000 17.77 14.97 0.00 4.02
174 175 2.564947 CAAGTGGTAGAAGAGCTCACCT 59.435 50.000 17.77 14.23 32.04 4.00
175 176 2.896039 AGTGGTAGAAGAGCTCACCTT 58.104 47.619 17.77 0.63 32.04 3.50
176 177 4.048970 AGTGGTAGAAGAGCTCACCTTA 57.951 45.455 17.77 0.00 32.04 2.69
177 178 4.615513 AGTGGTAGAAGAGCTCACCTTAT 58.384 43.478 17.77 1.27 32.04 1.73
178 179 5.767670 AGTGGTAGAAGAGCTCACCTTATA 58.232 41.667 17.77 0.21 32.04 0.98
179 180 6.195700 AGTGGTAGAAGAGCTCACCTTATAA 58.804 40.000 17.77 0.00 32.04 0.98
180 181 6.668283 AGTGGTAGAAGAGCTCACCTTATAAA 59.332 38.462 17.77 0.00 32.04 1.40
182 183 6.895756 TGGTAGAAGAGCTCACCTTATAAAGA 59.104 38.462 17.77 0.00 32.04 2.52
183 184 7.068839 TGGTAGAAGAGCTCACCTTATAAAGAG 59.931 40.741 17.77 5.36 32.04 2.85
184 185 6.478512 AGAAGAGCTCACCTTATAAAGAGG 57.521 41.667 17.77 0.62 40.24 3.69
194 195 5.735766 ACCTTATAAAGAGGTGCAACTCTC 58.264 41.667 33.62 18.20 46.70 3.20
196 197 6.045955 CCTTATAAAGAGGTGCAACTCTCTC 58.954 44.000 33.62 7.77 46.70 3.20
197 198 6.127196 CCTTATAAAGAGGTGCAACTCTCTCT 60.127 42.308 33.62 22.29 46.70 3.10
198 199 3.676291 AAAGAGGTGCAACTCTCTCTC 57.324 47.619 33.62 6.52 46.70 3.20
199 200 2.300956 AGAGGTGCAACTCTCTCTCA 57.699 50.000 28.85 0.00 44.23 3.27
200 201 2.603021 AGAGGTGCAACTCTCTCTCAA 58.397 47.619 28.85 0.00 44.23 3.02
201 202 2.298729 AGAGGTGCAACTCTCTCTCAAC 59.701 50.000 28.85 0.14 44.23 3.18
202 203 2.298729 GAGGTGCAACTCTCTCTCAACT 59.701 50.000 24.80 0.00 36.74 3.16
203 204 2.703007 AGGTGCAACTCTCTCTCAACTT 59.297 45.455 0.00 0.00 36.74 2.66
204 205 3.135530 AGGTGCAACTCTCTCTCAACTTT 59.864 43.478 0.00 0.00 36.74 2.66
205 206 3.496507 GGTGCAACTCTCTCTCAACTTTC 59.503 47.826 0.00 0.00 36.74 2.62
207 208 2.734079 GCAACTCTCTCTCAACTTTCGG 59.266 50.000 0.00 0.00 0.00 4.30
208 209 3.321497 CAACTCTCTCTCAACTTTCGGG 58.679 50.000 0.00 0.00 0.00 5.14
211 212 1.618837 TCTCTCTCAACTTTCGGGGTG 59.381 52.381 0.00 0.00 0.00 4.61
212 213 0.685097 TCTCTCAACTTTCGGGGTGG 59.315 55.000 0.00 0.00 0.00 4.61
213 214 0.321653 CTCTCAACTTTCGGGGTGGG 60.322 60.000 0.00 0.00 0.00 4.61
215 216 0.605589 CTCAACTTTCGGGGTGGGAC 60.606 60.000 0.00 0.00 0.00 4.46
216 217 1.057851 TCAACTTTCGGGGTGGGACT 61.058 55.000 0.00 0.00 0.00 3.85
217 218 0.688487 CAACTTTCGGGGTGGGACTA 59.312 55.000 0.00 0.00 0.00 2.59
219 220 0.981943 ACTTTCGGGGTGGGACTAAG 59.018 55.000 0.00 0.00 0.00 2.18
220 221 0.981943 CTTTCGGGGTGGGACTAAGT 59.018 55.000 0.00 0.00 0.00 2.24
222 223 1.437397 TTCGGGGTGGGACTAAGTTT 58.563 50.000 0.00 0.00 0.00 2.66
223 224 1.437397 TCGGGGTGGGACTAAGTTTT 58.563 50.000 0.00 0.00 0.00 2.43
224 225 2.618794 TCGGGGTGGGACTAAGTTTTA 58.381 47.619 0.00 0.00 0.00 1.52
228 229 3.586174 GGGGTGGGACTAAGTTTTAGTCT 59.414 47.826 21.63 0.00 42.54 3.24
235 236 7.664758 TGGGACTAAGTTTTAGTCTCACTAAC 58.335 38.462 21.59 8.30 46.65 2.34
236 237 7.508296 TGGGACTAAGTTTTAGTCTCACTAACT 59.492 37.037 21.59 0.00 46.65 2.24
238 239 8.028354 GGACTAAGTTTTAGTCTCACTAACTCC 58.972 40.741 21.63 5.17 40.12 3.85
240 241 8.358895 ACTAAGTTTTAGTCTCACTAACTCCAC 58.641 37.037 0.00 0.00 40.12 4.02
241 242 6.980416 AGTTTTAGTCTCACTAACTCCACT 57.020 37.500 0.00 0.00 40.12 4.00
242 243 6.983984 AGTTTTAGTCTCACTAACTCCACTC 58.016 40.000 0.00 0.00 40.12 3.51
243 244 6.550108 AGTTTTAGTCTCACTAACTCCACTCA 59.450 38.462 0.00 0.00 40.12 3.41
245 246 8.521176 GTTTTAGTCTCACTAACTCCACTCATA 58.479 37.037 0.00 0.00 40.12 2.15
246 247 8.824756 TTTAGTCTCACTAACTCCACTCATAT 57.175 34.615 0.00 0.00 40.12 1.78
248 249 6.191315 AGTCTCACTAACTCCACTCATATGT 58.809 40.000 1.90 0.00 0.00 2.29
250 251 5.952347 TCTCACTAACTCCACTCATATGTGT 59.048 40.000 4.59 4.59 36.30 3.72
251 252 5.965922 TCACTAACTCCACTCATATGTGTG 58.034 41.667 24.52 24.52 38.75 3.82
252 253 4.568359 CACTAACTCCACTCATATGTGTGC 59.432 45.833 25.59 0.00 37.99 4.57
253 254 3.701205 AACTCCACTCATATGTGTGCA 57.299 42.857 25.59 14.98 37.99 4.57
255 256 3.538591 ACTCCACTCATATGTGTGCATG 58.461 45.455 25.59 19.68 37.99 4.06
256 257 3.198417 ACTCCACTCATATGTGTGCATGA 59.802 43.478 25.59 18.27 37.99 3.07
257 258 4.193865 CTCCACTCATATGTGTGCATGAA 58.806 43.478 25.59 11.38 37.99 2.57
258 259 4.784177 TCCACTCATATGTGTGCATGAAT 58.216 39.130 25.59 0.00 37.99 2.57
259 260 5.195185 TCCACTCATATGTGTGCATGAATT 58.805 37.500 25.59 0.00 37.99 2.17
260 261 5.066764 TCCACTCATATGTGTGCATGAATTG 59.933 40.000 25.59 13.49 37.99 2.32
261 262 5.278604 CACTCATATGTGTGCATGAATTGG 58.721 41.667 21.28 0.00 36.58 3.16
262 263 4.202080 ACTCATATGTGTGCATGAATTGGC 60.202 41.667 9.55 0.00 36.58 4.52
263 264 3.068448 TCATATGTGTGCATGAATTGGCC 59.932 43.478 1.90 0.00 36.58 5.36
264 265 1.268066 ATGTGTGCATGAATTGGCCA 58.732 45.000 0.00 0.00 33.37 5.36
265 266 1.046204 TGTGTGCATGAATTGGCCAA 58.954 45.000 23.00 23.00 0.00 4.52
266 267 1.001068 TGTGTGCATGAATTGGCCAAG 59.999 47.619 24.94 10.87 0.00 3.61
268 269 1.546923 TGTGCATGAATTGGCCAAGAG 59.453 47.619 24.94 12.06 0.00 2.85
269 270 1.820519 GTGCATGAATTGGCCAAGAGA 59.179 47.619 24.94 9.91 0.00 3.10
270 271 2.231964 GTGCATGAATTGGCCAAGAGAA 59.768 45.455 24.94 9.76 0.00 2.87
271 272 3.101437 TGCATGAATTGGCCAAGAGAAT 58.899 40.909 24.94 11.67 0.00 2.40
272 273 3.516300 TGCATGAATTGGCCAAGAGAATT 59.484 39.130 24.94 12.82 0.00 2.17
273 274 4.020039 TGCATGAATTGGCCAAGAGAATTT 60.020 37.500 24.94 12.03 0.00 1.82
274 275 4.569564 GCATGAATTGGCCAAGAGAATTTC 59.430 41.667 24.94 20.23 0.00 2.17
275 276 5.726397 CATGAATTGGCCAAGAGAATTTCA 58.274 37.500 24.70 24.70 0.00 2.69
276 277 5.395682 TGAATTGGCCAAGAGAATTTCAG 57.604 39.130 24.94 0.00 0.00 3.02
277 278 5.078949 TGAATTGGCCAAGAGAATTTCAGA 58.921 37.500 24.94 3.96 0.00 3.27
278 279 5.539574 TGAATTGGCCAAGAGAATTTCAGAA 59.460 36.000 24.94 3.26 0.00 3.02
279 280 6.211986 TGAATTGGCCAAGAGAATTTCAGAAT 59.788 34.615 24.94 0.00 0.00 2.40
281 282 6.423776 TTGGCCAAGAGAATTTCAGAATTT 57.576 33.333 16.05 0.00 35.65 1.82
282 283 6.423776 TGGCCAAGAGAATTTCAGAATTTT 57.576 33.333 0.61 0.00 35.65 1.82
284 285 7.605449 TGGCCAAGAGAATTTCAGAATTTTAG 58.395 34.615 0.61 0.00 35.65 1.85
285 286 7.233348 TGGCCAAGAGAATTTCAGAATTTTAGT 59.767 33.333 0.61 0.00 35.65 2.24
288 289 9.415544 CCAAGAGAATTTCAGAATTTTAGTTGG 57.584 33.333 0.00 9.41 35.65 3.77
291 292 7.452813 AGAGAATTTCAGAATTTTAGTTGGGCT 59.547 33.333 0.00 0.00 35.65 5.19
293 294 8.432013 AGAATTTCAGAATTTTAGTTGGGCTTT 58.568 29.630 0.00 0.00 35.65 3.51
295 296 5.467035 TCAGAATTTTAGTTGGGCTTTGG 57.533 39.130 0.00 0.00 0.00 3.28
297 298 3.007940 AGAATTTTAGTTGGGCTTTGGGC 59.992 43.478 0.00 0.00 40.90 5.36
314 315 2.212327 GCCAGAGGCCTACTAGCAA 58.788 57.895 4.42 0.00 44.06 3.91
315 316 0.541863 GCCAGAGGCCTACTAGCAAA 59.458 55.000 4.42 0.00 44.06 3.68
318 319 3.891049 CCAGAGGCCTACTAGCAAAATT 58.109 45.455 4.42 0.00 0.00 1.82
320 321 4.384647 CCAGAGGCCTACTAGCAAAATTCT 60.385 45.833 4.42 0.00 0.00 2.40
321 322 5.163301 CCAGAGGCCTACTAGCAAAATTCTA 60.163 44.000 4.42 0.00 0.00 2.10
322 323 6.349300 CAGAGGCCTACTAGCAAAATTCTAA 58.651 40.000 4.42 0.00 0.00 2.10
324 325 6.824196 AGAGGCCTACTAGCAAAATTCTAAAC 59.176 38.462 4.42 0.00 0.00 2.01
325 326 6.481643 AGGCCTACTAGCAAAATTCTAAACA 58.518 36.000 1.29 0.00 0.00 2.83
326 327 7.119387 AGGCCTACTAGCAAAATTCTAAACAT 58.881 34.615 1.29 0.00 0.00 2.71
327 328 7.615757 AGGCCTACTAGCAAAATTCTAAACATT 59.384 33.333 1.29 0.00 0.00 2.71
328 329 8.251026 GGCCTACTAGCAAAATTCTAAACATTT 58.749 33.333 0.00 0.00 0.00 2.32
371 2475 7.968956 ACTTATACGAGTGAACAGACACATAAG 59.031 37.037 0.00 0.00 42.45 1.73
385 2489 3.857665 ACACATAAGAACGCGTCTACATG 59.142 43.478 14.44 16.30 34.56 3.21
391 2495 0.108377 AACGCGTCTACATGCATCCA 60.108 50.000 14.44 0.00 33.65 3.41
398 2502 3.201290 GTCTACATGCATCCAACTCAGG 58.799 50.000 0.00 0.00 0.00 3.86
437 2541 9.425248 AGCATCTTATAATTTGAAATGAAGGGA 57.575 29.630 0.00 0.00 0.00 4.20
438 2542 9.468532 GCATCTTATAATTTGAAATGAAGGGAC 57.531 33.333 0.00 0.00 0.00 4.46
439 2543 9.669353 CATCTTATAATTTGAAATGAAGGGACG 57.331 33.333 0.00 0.00 0.00 4.79
440 2544 7.703328 TCTTATAATTTGAAATGAAGGGACGC 58.297 34.615 0.00 0.00 0.00 5.19
452 2559 1.411041 AGGGACGCCTACACTAATCC 58.589 55.000 0.00 0.00 0.00 3.01
460 2567 5.844004 ACGCCTACACTAATCCAAAGATAG 58.156 41.667 0.00 0.00 30.42 2.08
465 2572 9.343539 GCCTACACTAATCCAAAGATAGAAAAT 57.656 33.333 0.00 0.00 30.42 1.82
475 2582 1.672881 AGATAGAAAATGCAGCACCGC 59.327 47.619 0.00 0.00 0.00 5.68
511 10210 0.882042 GCCACATATCTGGACGCCTG 60.882 60.000 0.44 0.00 32.30 4.85
513 10212 0.250038 CACATATCTGGACGCCTGGG 60.250 60.000 0.00 0.00 0.00 4.45
544 12523 3.020984 AGAAAGAAGCTCTCTAGGGACG 58.979 50.000 0.00 0.00 32.46 4.79
696 12675 4.980903 GCAGCGGCCAAACACACG 62.981 66.667 2.24 0.00 0.00 4.49
704 12683 3.276091 CAAACACACGGCAGCGGA 61.276 61.111 7.02 0.00 0.00 5.54
729 12708 1.889170 CTGGAAGCAGAAAGGAAACCC 59.111 52.381 0.00 0.00 0.00 4.11
747 12726 2.300437 ACCCAAGAGAAAAGAGACGAGG 59.700 50.000 0.00 0.00 0.00 4.63
935 12939 1.378514 TTTCCCCAATCTCGCAGCC 60.379 57.895 0.00 0.00 0.00 4.85
1464 13496 0.974383 AGATCGTTTCCCAGGTCGTT 59.026 50.000 0.00 0.00 0.00 3.85
1488 13520 1.109609 GGAAGATCCCCTCGTACGTT 58.890 55.000 16.05 0.00 0.00 3.99
1635 13667 4.819761 TGCTGCGAGATGCCCGTC 62.820 66.667 0.00 0.00 45.60 4.79
1925 13957 7.563924 TGTGGTCTTTAGCAGGTATAATAGACT 59.436 37.037 0.00 0.00 32.75 3.24
1937 13980 8.688151 CAGGTATAATAGACTAGATTAGTGCCC 58.312 40.741 0.00 0.00 39.59 5.36
1940 13983 9.257428 GTATAATAGACTAGATTAGTGCCCCTT 57.743 37.037 0.00 0.00 39.59 3.95
1943 13986 8.562949 AATAGACTAGATTAGTGCCCCTTTTA 57.437 34.615 0.00 0.00 39.59 1.52
1950 13993 4.919774 TTAGTGCCCCTTTTATCTGTCA 57.080 40.909 0.00 0.00 0.00 3.58
1952 13995 6.569127 TTAGTGCCCCTTTTATCTGTCATA 57.431 37.500 0.00 0.00 0.00 2.15
1990 14033 3.424302 GCTCGCACGACAAATGTCATTAA 60.424 43.478 13.51 0.00 44.99 1.40
1999 14042 5.450376 ACAAATGTCATTAAGCTACGACG 57.550 39.130 0.00 0.00 0.00 5.12
2001 14044 5.061808 ACAAATGTCATTAAGCTACGACGTC 59.938 40.000 2.43 5.18 0.00 4.34
2031 14074 5.412904 TGTTTGACGATATGTTTATGTGCCA 59.587 36.000 0.00 0.00 0.00 4.92
2106 14274 1.136252 CGTTTGTGCAGATCAACGAGG 60.136 52.381 13.80 0.00 0.00 4.63
2334 14502 4.183865 TGCTTTCTTCGATCGTGAATGAT 58.816 39.130 26.22 0.00 0.00 2.45
2351 14519 7.224557 CGTGAATGATGTTGTACCATTGATAGA 59.775 37.037 0.00 0.00 31.40 1.98
2352 14520 9.060347 GTGAATGATGTTGTACCATTGATAGAT 57.940 33.333 0.00 0.00 31.40 1.98
2353 14521 9.631257 TGAATGATGTTGTACCATTGATAGATT 57.369 29.630 0.00 0.00 31.40 2.40
2406 14577 5.011125 TGGCTAGTTATGACTTATCAGAGCC 59.989 44.000 16.24 16.24 39.61 4.70
2429 14600 6.033966 CCTTCTAATAATTTTGGACGCCAAC 58.966 40.000 10.30 0.00 43.82 3.77
2440 14611 3.117589 ACGCCAACATACGTCTGAC 57.882 52.632 8.06 0.00 38.28 3.51
2473 14645 0.527113 TAACCCGAGCGAAACGATCA 59.473 50.000 9.79 0.00 42.67 2.92
2499 14671 0.468029 CAGGCAGGGTGGAACAAACT 60.468 55.000 0.00 0.00 44.16 2.66
2502 14674 2.091555 AGGCAGGGTGGAACAAACTAAA 60.092 45.455 0.00 0.00 44.16 1.85
2503 14675 2.696187 GGCAGGGTGGAACAAACTAAAA 59.304 45.455 0.00 0.00 44.16 1.52
2505 14677 4.368315 GCAGGGTGGAACAAACTAAAAAG 58.632 43.478 0.00 0.00 44.16 2.27
2510 14682 5.163632 GGGTGGAACAAACTAAAAAGTTCGA 60.164 40.000 0.00 0.00 44.16 3.71
2515 14687 5.412526 ACAAACTAAAAAGTTCGATCGCA 57.587 34.783 11.09 0.00 0.00 5.10
2520 14692 6.969669 ACTAAAAAGTTCGATCGCAAAAAG 57.030 33.333 11.09 2.93 0.00 2.27
2553 14728 5.988310 TCCATTGAATGCTTCAGAATTGT 57.012 34.783 0.00 0.00 41.38 2.71
2594 14769 1.579429 CCGTGCTGTTGTAAAGGGC 59.421 57.895 0.00 0.00 0.00 5.19
2607 14783 0.971386 AAAGGGCTTGCCATGTTCTG 59.029 50.000 14.04 0.00 0.00 3.02
2612 14788 1.068055 GGCTTGCCATGTTCTGAAGTG 60.068 52.381 6.79 0.00 0.00 3.16
2621 14797 5.535333 CCATGTTCTGAAGTGAAAATTGCT 58.465 37.500 0.00 0.00 0.00 3.91
2638 14814 9.525409 GAAAATTGCTATGCTCAGAAATATTGT 57.475 29.630 0.00 0.00 0.00 2.71
2648 14824 6.127925 TGCTCAGAAATATTGTCATGTTGACC 60.128 38.462 5.27 0.00 46.40 4.02
2669 14845 2.223572 CGAAGGAAATTGCCATGCTACC 60.224 50.000 4.92 0.00 0.00 3.18
2674 14850 3.385755 GGAAATTGCCATGCTACCTCAAT 59.614 43.478 0.00 0.00 0.00 2.57
2712 14889 5.726980 TGCCATGCTCTAAAAACTGAAAT 57.273 34.783 0.00 0.00 0.00 2.17
2721 14898 5.708948 TCTAAAAACTGAAATTGCCATCCG 58.291 37.500 0.00 0.00 0.00 4.18
2802 14980 4.134563 AGCGAACACTTTAGGATTTGTGT 58.865 39.130 0.00 0.00 44.27 3.72
2815 14993 2.363306 TTTGTGTGCAGGATCCAACT 57.637 45.000 15.82 0.00 0.00 3.16
2821 14999 0.322816 TGCAGGATCCAACTTGCCTC 60.323 55.000 15.82 0.00 41.15 4.70
2846 15024 3.001736 GGCGTTAGCTCTGATTGCTTAAG 59.998 47.826 0.00 0.00 44.37 1.85
3025 15518 9.722056 GCATGATAGATGTTTAAGGTGTTTTAG 57.278 33.333 0.00 0.00 0.00 1.85
3172 15676 1.268625 GTTGGGCTACCTTTTTGTCCG 59.731 52.381 0.00 0.00 37.76 4.79
3313 15817 4.935205 TGTCATGACACAAGTAATACCAGC 59.065 41.667 24.56 0.00 36.21 4.85
3360 15864 5.301805 TCATAGAGCGATGTTCCAATCTGTA 59.698 40.000 0.00 0.00 0.00 2.74
3445 15970 4.600692 ATGCACCGTATTCATAGCAGTA 57.399 40.909 0.00 0.00 35.26 2.74
3497 16023 7.088589 TCTAGCTTTTTCACATATCTTTGGC 57.911 36.000 0.00 0.00 0.00 4.52
3597 16123 0.834687 TTGAGGGGCGTGGTAAGTCT 60.835 55.000 0.00 0.00 0.00 3.24
3606 16132 1.263217 CGTGGTAAGTCTGTGGTTTGC 59.737 52.381 0.00 0.00 0.00 3.68
3627 16153 3.648009 CGAGGCAATAATCAGAGAGGAC 58.352 50.000 0.00 0.00 0.00 3.85
3678 16204 2.552743 TCAGTCACTCGTCGAGTTGAAT 59.447 45.455 24.94 19.86 41.37 2.57
3910 16436 8.624701 ACGAAGCAATATTTTTCTTCATGATG 57.375 30.769 16.07 0.00 35.82 3.07
3964 16501 7.543947 TGACATATGTTGATTGTCAGTCATC 57.456 36.000 10.30 0.00 43.44 2.92
3985 16522 4.528920 TCCCCTTATTTTGTTATCCACGG 58.471 43.478 0.00 0.00 0.00 4.94
3994 16531 6.825944 TTTTGTTATCCACGGATTGATGAA 57.174 33.333 3.41 0.00 36.17 2.57
4014 16551 1.691196 TTTTGCACTTCAGACCCTGG 58.309 50.000 0.00 0.00 31.51 4.45
4023 16560 0.764890 TCAGACCCTGGTCCTTTGTG 59.235 55.000 12.66 4.64 45.59 3.33
4062 16599 6.644248 TTCAATCAATTAGATGGCATCCTG 57.356 37.500 23.33 15.16 36.96 3.86
4063 16600 5.698104 TCAATCAATTAGATGGCATCCTGT 58.302 37.500 23.33 8.36 36.96 4.00
4160 16806 5.485353 TCCCACCCATTTAATTGCAAACATA 59.515 36.000 1.71 0.00 0.00 2.29
4163 16809 7.440856 CCCACCCATTTAATTGCAAACATATAC 59.559 37.037 1.71 0.00 0.00 1.47
4166 16812 9.545105 ACCCATTTAATTGCAAACATATACATG 57.455 29.630 1.71 0.00 38.21 3.21
4224 16870 8.953313 AGGTTACCTGGAGATTTTAAAATAACG 58.047 33.333 13.34 1.91 29.57 3.18
4283 16964 4.452114 GCACGATATAGATGGCATGTTCAA 59.548 41.667 3.81 0.00 0.00 2.69
4411 17104 2.748461 TTCCTTTCGTTTGCTGTTCG 57.252 45.000 0.00 0.00 0.00 3.95
4413 17106 0.660300 CCTTTCGTTTGCTGTTCGCC 60.660 55.000 0.00 0.00 38.05 5.54
4415 17108 0.736053 TTTCGTTTGCTGTTCGCCTT 59.264 45.000 0.00 0.00 38.05 4.35
4459 17161 3.461773 GCTCAGGCTAGACCGGCA 61.462 66.667 0.00 0.00 46.52 5.69
4525 17227 6.521162 TGCTATTATTGTCGAGAAAGGCATA 58.479 36.000 0.00 0.00 0.00 3.14
4793 17501 4.828925 GCTGGCGAGCTGTCCCTC 62.829 72.222 14.13 0.00 42.52 4.30
4829 17537 2.362369 CGGCCATCTGGTCCAGAGT 61.362 63.158 25.50 11.94 44.08 3.24
4955 17676 6.397831 CGAAATGTTCGCCGGATATATAAA 57.602 37.500 5.05 0.00 46.97 1.40
4956 17677 7.000575 CGAAATGTTCGCCGGATATATAAAT 57.999 36.000 5.05 0.00 46.97 1.40
4986 17708 1.374758 CTTCGTGGGAGTGGACAGC 60.375 63.158 0.00 0.00 0.00 4.40
4996 17718 4.330056 TGGACAGCCAAGGAAGGA 57.670 55.556 0.00 0.00 42.49 3.36
5067 17805 0.320946 GAAACCCCGTCGGATGAACA 60.321 55.000 14.39 0.00 34.64 3.18
5160 17898 2.044353 ACCCTGGATGTGGCCTATTTTT 59.956 45.455 3.32 0.00 0.00 1.94
5161 17899 3.270960 ACCCTGGATGTGGCCTATTTTTA 59.729 43.478 3.32 0.00 0.00 1.52
5165 17903 6.126796 CCCTGGATGTGGCCTATTTTTATTTT 60.127 38.462 3.32 0.00 0.00 1.82
5166 17904 6.986231 CCTGGATGTGGCCTATTTTTATTTTC 59.014 38.462 3.32 0.00 0.00 2.29
5233 17975 2.612972 GCCCGTCTTGAATCTTCTGACA 60.613 50.000 13.04 0.00 33.97 3.58
5247 17989 4.331717 TCTTCTGACACCTTCGTTGTTTTC 59.668 41.667 0.00 0.00 0.00 2.29
5267 18009 3.602483 TCGTCCAAAGCTTACATTACCC 58.398 45.455 0.00 0.00 0.00 3.69
5279 18025 5.106277 GCTTACATTACCCTGTTTCTGTTCC 60.106 44.000 0.00 0.00 0.00 3.62
5280 18026 4.724279 ACATTACCCTGTTTCTGTTCCT 57.276 40.909 0.00 0.00 0.00 3.36
5281 18027 5.061721 ACATTACCCTGTTTCTGTTCCTT 57.938 39.130 0.00 0.00 0.00 3.36
5282 18028 5.454966 ACATTACCCTGTTTCTGTTCCTTT 58.545 37.500 0.00 0.00 0.00 3.11
5283 18029 5.535030 ACATTACCCTGTTTCTGTTCCTTTC 59.465 40.000 0.00 0.00 0.00 2.62
5284 18030 3.953542 ACCCTGTTTCTGTTCCTTTCT 57.046 42.857 0.00 0.00 0.00 2.52
5285 18031 3.555966 ACCCTGTTTCTGTTCCTTTCTG 58.444 45.455 0.00 0.00 0.00 3.02
5286 18032 3.053619 ACCCTGTTTCTGTTCCTTTCTGT 60.054 43.478 0.00 0.00 0.00 3.41
5287 18033 3.954258 CCCTGTTTCTGTTCCTTTCTGTT 59.046 43.478 0.00 0.00 0.00 3.16
5288 18034 5.130350 CCCTGTTTCTGTTCCTTTCTGTTA 58.870 41.667 0.00 0.00 0.00 2.41
5289 18035 5.008712 CCCTGTTTCTGTTCCTTTCTGTTAC 59.991 44.000 0.00 0.00 0.00 2.50
5290 18036 5.823045 CCTGTTTCTGTTCCTTTCTGTTACT 59.177 40.000 0.00 0.00 0.00 2.24
5291 18037 6.238484 CCTGTTTCTGTTCCTTTCTGTTACTG 60.238 42.308 0.00 0.00 0.00 2.74
5292 18038 5.065988 TGTTTCTGTTCCTTTCTGTTACTGC 59.934 40.000 0.00 0.00 0.00 4.40
5295 18041 3.740115 TGTTCCTTTCTGTTACTGCCTC 58.260 45.455 0.00 0.00 0.00 4.70
5311 18057 1.065126 GCCTCCAGGAATGCTTGTAGT 60.065 52.381 0.00 0.00 37.39 2.73
5312 18058 2.170607 GCCTCCAGGAATGCTTGTAGTA 59.829 50.000 0.00 0.00 37.39 1.82
5313 18059 3.742640 GCCTCCAGGAATGCTTGTAGTAG 60.743 52.174 0.00 0.00 37.39 2.57
5356 18102 7.169308 TCAGTTTCGTCTGTTTGATCTTTCTAC 59.831 37.037 0.00 0.00 36.85 2.59
5478 18224 2.743126 TCTTCGTGACCGTGTTTGTTTT 59.257 40.909 0.00 0.00 35.01 2.43
5480 18226 1.397692 TCGTGACCGTGTTTGTTTTCC 59.602 47.619 0.00 0.00 35.01 3.13
5529 18275 1.233285 GCAGAGTCCCAGCTGTTGTG 61.233 60.000 13.81 5.38 34.66 3.33
5537 18283 1.382522 CCAGCTGTTGTGTGTTCTGT 58.617 50.000 13.81 0.00 0.00 3.41
5631 18385 2.772287 ACTTGACACTCTTGGCTTAGC 58.228 47.619 0.00 0.00 0.00 3.09
5688 19179 4.108501 TCCAAGGAGGAGCACGTATATA 57.891 45.455 0.00 0.00 43.07 0.86
5692 19183 5.223382 CAAGGAGGAGCACGTATATACTTG 58.777 45.833 13.59 13.59 0.00 3.16
5700 19191 5.902681 AGCACGTATATACTTGAGCAGAAA 58.097 37.500 20.32 0.00 0.00 2.52
5701 19192 5.980116 AGCACGTATATACTTGAGCAGAAAG 59.020 40.000 20.32 0.10 0.00 2.62
5702 19193 5.977725 GCACGTATATACTTGAGCAGAAAGA 59.022 40.000 20.32 0.00 0.00 2.52
5705 19196 6.153067 CGTATATACTTGAGCAGAAAGAGGG 58.847 44.000 11.05 0.00 0.00 4.30
5706 19197 6.239064 CGTATATACTTGAGCAGAAAGAGGGT 60.239 42.308 11.05 0.00 0.00 4.34
5707 19198 7.040617 CGTATATACTTGAGCAGAAAGAGGGTA 60.041 40.741 11.05 0.00 0.00 3.69
5708 19199 3.686916 ACTTGAGCAGAAAGAGGGTAC 57.313 47.619 0.66 0.00 0.00 3.34
5709 19200 2.972713 ACTTGAGCAGAAAGAGGGTACA 59.027 45.455 0.00 0.00 0.00 2.90
5710 19201 3.244249 ACTTGAGCAGAAAGAGGGTACAC 60.244 47.826 0.00 0.00 0.00 2.90
5711 19202 1.272490 TGAGCAGAAAGAGGGTACACG 59.728 52.381 0.00 0.00 0.00 4.49
5754 19307 0.668706 CAGACTCCTCACACCGCAAG 60.669 60.000 0.00 0.00 0.00 4.01
5775 19328 3.564644 AGTCATCTATTCGTCCGGTACAG 59.435 47.826 0.00 0.00 0.00 2.74
5803 19356 2.835895 GGGCCCGTGTGTTTGGTT 60.836 61.111 5.69 0.00 0.00 3.67
5805 19358 2.122167 GGCCCGTGTGTTTGGTTGA 61.122 57.895 0.00 0.00 0.00 3.18
5806 19359 1.668101 GGCCCGTGTGTTTGGTTGAA 61.668 55.000 0.00 0.00 0.00 2.69
5808 19361 1.099689 CCCGTGTGTTTGGTTGAAGT 58.900 50.000 0.00 0.00 0.00 3.01
5810 19363 1.740585 CCGTGTGTTTGGTTGAAGTCA 59.259 47.619 0.00 0.00 0.00 3.41
5811 19364 2.357637 CCGTGTGTTTGGTTGAAGTCAT 59.642 45.455 0.00 0.00 0.00 3.06
5812 19365 3.362295 CGTGTGTTTGGTTGAAGTCATG 58.638 45.455 0.00 0.00 0.00 3.07
5814 19367 3.380004 GTGTGTTTGGTTGAAGTCATGGA 59.620 43.478 0.00 0.00 0.00 3.41
5818 19371 4.141367 TGTTTGGTTGAAGTCATGGACCTA 60.141 41.667 0.00 0.00 32.18 3.08
5820 19373 4.220693 TGGTTGAAGTCATGGACCTATG 57.779 45.455 0.00 0.00 32.18 2.23
5829 19396 4.564110 GGACCTATGGCCGGGCAC 62.564 72.222 35.30 20.03 0.00 5.01
5847 19414 2.635714 CACCCCAAACCGGTCTTATAC 58.364 52.381 8.04 0.00 0.00 1.47
5848 19415 2.027007 CACCCCAAACCGGTCTTATACA 60.027 50.000 8.04 0.00 0.00 2.29
5850 19417 3.118149 ACCCCAAACCGGTCTTATACATC 60.118 47.826 8.04 0.00 0.00 3.06
5870 19437 4.101448 GTCGGGCTGCCTGGTCAT 62.101 66.667 26.46 0.00 0.00 3.06
5871 19438 4.100084 TCGGGCTGCCTGGTCATG 62.100 66.667 26.46 4.80 0.00 3.07
5872 19439 4.415150 CGGGCTGCCTGGTCATGT 62.415 66.667 20.04 0.00 0.00 3.21
5873 19440 2.036256 GGGCTGCCTGGTCATGTT 59.964 61.111 19.68 0.00 0.00 2.71
5874 19441 1.607467 GGGCTGCCTGGTCATGTTT 60.607 57.895 19.68 0.00 0.00 2.83
5875 19442 1.187567 GGGCTGCCTGGTCATGTTTT 61.188 55.000 19.68 0.00 0.00 2.43
5876 19443 0.681175 GGCTGCCTGGTCATGTTTTT 59.319 50.000 12.43 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 8.802267 TCGGGAAAAATTGAAGAGTCATTAATT 58.198 29.630 0.00 0.00 32.48 1.40
9 10 7.229707 TGTTCGGGAAAAATTGAAGAGTCATTA 59.770 33.333 0.00 0.00 32.48 1.90
10 11 6.040391 TGTTCGGGAAAAATTGAAGAGTCATT 59.960 34.615 0.00 0.00 32.48 2.57
12 13 4.884744 TGTTCGGGAAAAATTGAAGAGTCA 59.115 37.500 0.00 0.00 0.00 3.41
13 14 5.432885 TGTTCGGGAAAAATTGAAGAGTC 57.567 39.130 0.00 0.00 0.00 3.36
15 16 4.229876 GCTGTTCGGGAAAAATTGAAGAG 58.770 43.478 0.00 0.00 35.51 2.85
16 17 3.634448 TGCTGTTCGGGAAAAATTGAAGA 59.366 39.130 0.00 0.00 0.00 2.87
18 19 4.392921 TTGCTGTTCGGGAAAAATTGAA 57.607 36.364 0.00 0.00 0.00 2.69
20 21 5.476752 TTTTTGCTGTTCGGGAAAAATTG 57.523 34.783 15.91 0.00 39.98 2.32
21 22 7.977789 ATATTTTTGCTGTTCGGGAAAAATT 57.022 28.000 27.78 18.32 46.86 1.82
24 25 7.040340 TGTCTATATTTTTGCTGTTCGGGAAAA 60.040 33.333 6.89 6.89 35.38 2.29
25 26 6.431543 TGTCTATATTTTTGCTGTTCGGGAAA 59.568 34.615 0.00 0.00 0.00 3.13
26 27 5.941058 TGTCTATATTTTTGCTGTTCGGGAA 59.059 36.000 0.00 0.00 0.00 3.97
27 28 5.492895 TGTCTATATTTTTGCTGTTCGGGA 58.507 37.500 0.00 0.00 0.00 5.14
28 29 5.811399 TGTCTATATTTTTGCTGTTCGGG 57.189 39.130 0.00 0.00 0.00 5.14
29 30 5.732647 CGTTGTCTATATTTTTGCTGTTCGG 59.267 40.000 0.00 0.00 0.00 4.30
30 31 6.246332 CACGTTGTCTATATTTTTGCTGTTCG 59.754 38.462 0.00 0.00 0.00 3.95
31 32 6.032460 GCACGTTGTCTATATTTTTGCTGTTC 59.968 38.462 0.00 0.00 0.00 3.18
32 33 5.856455 GCACGTTGTCTATATTTTTGCTGTT 59.144 36.000 0.00 0.00 0.00 3.16
34 35 5.389778 TGCACGTTGTCTATATTTTTGCTG 58.610 37.500 0.00 0.00 0.00 4.41
35 36 5.621197 TGCACGTTGTCTATATTTTTGCT 57.379 34.783 0.00 0.00 0.00 3.91
36 37 6.140737 GCTATGCACGTTGTCTATATTTTTGC 59.859 38.462 0.00 0.00 0.00 3.68
37 38 7.409697 AGCTATGCACGTTGTCTATATTTTTG 58.590 34.615 0.00 0.00 0.00 2.44
39 40 6.986817 AGAGCTATGCACGTTGTCTATATTTT 59.013 34.615 0.00 0.00 0.00 1.82
41 42 5.923114 CAGAGCTATGCACGTTGTCTATATT 59.077 40.000 0.00 0.00 0.00 1.28
45 46 2.492088 ACAGAGCTATGCACGTTGTCTA 59.508 45.455 8.60 0.00 0.00 2.59
47 48 1.656095 GACAGAGCTATGCACGTTGTC 59.344 52.381 8.60 0.00 0.00 3.18
51 52 0.457851 GAGGACAGAGCTATGCACGT 59.542 55.000 8.60 4.69 0.00 4.49
52 53 0.593518 CGAGGACAGAGCTATGCACG 60.594 60.000 8.60 5.54 0.00 5.34
53 54 0.249238 CCGAGGACAGAGCTATGCAC 60.249 60.000 8.60 1.13 0.00 4.57
54 55 2.021068 GCCGAGGACAGAGCTATGCA 62.021 60.000 8.60 0.00 0.00 3.96
55 56 1.300542 GCCGAGGACAGAGCTATGC 60.301 63.158 8.60 1.04 0.00 3.14
56 57 0.313672 GAGCCGAGGACAGAGCTATG 59.686 60.000 6.84 6.84 35.23 2.23
57 58 0.106469 TGAGCCGAGGACAGAGCTAT 60.106 55.000 0.00 0.00 35.23 2.97
58 59 0.323451 TTGAGCCGAGGACAGAGCTA 60.323 55.000 0.00 0.00 35.23 3.32
59 60 0.975040 ATTGAGCCGAGGACAGAGCT 60.975 55.000 0.00 0.00 38.56 4.09
60 61 0.529555 GATTGAGCCGAGGACAGAGC 60.530 60.000 0.00 0.00 0.00 4.09
62 63 1.330655 GGGATTGAGCCGAGGACAGA 61.331 60.000 0.00 0.00 0.00 3.41
63 64 1.144936 GGGATTGAGCCGAGGACAG 59.855 63.158 0.00 0.00 0.00 3.51
64 65 2.721167 CGGGATTGAGCCGAGGACA 61.721 63.158 0.00 0.00 0.00 4.02
66 67 3.849951 GCGGGATTGAGCCGAGGA 61.850 66.667 0.00 0.00 0.00 3.71
67 68 3.680620 TTGCGGGATTGAGCCGAGG 62.681 63.158 0.00 0.00 0.00 4.63
71 72 3.140814 GGGTTGCGGGATTGAGCC 61.141 66.667 0.00 0.00 0.00 4.70
73 74 3.508840 GCGGGTTGCGGGATTGAG 61.509 66.667 0.00 0.00 0.00 3.02
102 103 3.591835 CTCCTCCTCCTCGCTCGC 61.592 72.222 0.00 0.00 0.00 5.03
103 104 3.591835 GCTCCTCCTCCTCGCTCG 61.592 72.222 0.00 0.00 0.00 5.03
104 105 3.591835 CGCTCCTCCTCCTCGCTC 61.592 72.222 0.00 0.00 0.00 5.03
117 118 3.966026 AAGACCTACACGCGCGCTC 62.966 63.158 32.58 17.73 0.00 5.03
118 119 3.966026 GAAGACCTACACGCGCGCT 62.966 63.158 32.58 18.29 0.00 5.92
119 120 3.542742 GAAGACCTACACGCGCGC 61.543 66.667 32.58 23.91 0.00 6.86
120 121 1.868251 GAGAAGACCTACACGCGCG 60.868 63.158 30.96 30.96 0.00 6.86
121 122 0.109226 AAGAGAAGACCTACACGCGC 60.109 55.000 5.73 0.00 0.00 6.86
123 124 2.488545 TGAGAAGAGAAGACCTACACGC 59.511 50.000 0.00 0.00 0.00 5.34
125 126 4.159506 AGCATGAGAAGAGAAGACCTACAC 59.840 45.833 0.00 0.00 0.00 2.90
126 127 4.348486 AGCATGAGAAGAGAAGACCTACA 58.652 43.478 0.00 0.00 0.00 2.74
127 128 4.400884 TGAGCATGAGAAGAGAAGACCTAC 59.599 45.833 0.00 0.00 0.00 3.18
129 130 3.439154 TGAGCATGAGAAGAGAAGACCT 58.561 45.455 0.00 0.00 0.00 3.85
130 131 3.883830 TGAGCATGAGAAGAGAAGACC 57.116 47.619 0.00 0.00 0.00 3.85
131 132 5.900425 TGTATGAGCATGAGAAGAGAAGAC 58.100 41.667 0.00 0.00 0.00 3.01
132 133 6.154192 ACTTGTATGAGCATGAGAAGAGAAGA 59.846 38.462 0.00 0.00 0.00 2.87
133 134 6.256104 CACTTGTATGAGCATGAGAAGAGAAG 59.744 42.308 0.00 0.00 0.00 2.85
134 135 6.104665 CACTTGTATGAGCATGAGAAGAGAA 58.895 40.000 0.00 0.00 0.00 2.87
135 136 5.394993 CCACTTGTATGAGCATGAGAAGAGA 60.395 44.000 0.00 0.00 0.00 3.10
136 137 4.809958 CCACTTGTATGAGCATGAGAAGAG 59.190 45.833 0.00 0.00 0.00 2.85
137 138 4.223700 ACCACTTGTATGAGCATGAGAAGA 59.776 41.667 0.00 0.00 0.00 2.87
138 139 4.511527 ACCACTTGTATGAGCATGAGAAG 58.488 43.478 0.00 0.00 0.00 2.85
139 140 4.558226 ACCACTTGTATGAGCATGAGAA 57.442 40.909 0.00 0.00 0.00 2.87
140 141 4.956075 TCTACCACTTGTATGAGCATGAGA 59.044 41.667 0.00 0.00 0.00 3.27
141 142 5.268118 TCTACCACTTGTATGAGCATGAG 57.732 43.478 0.00 0.00 0.00 2.90
142 143 5.422012 TCTTCTACCACTTGTATGAGCATGA 59.578 40.000 0.00 0.00 0.00 3.07
143 144 5.664457 TCTTCTACCACTTGTATGAGCATG 58.336 41.667 0.00 0.00 0.00 4.06
144 145 5.683509 GCTCTTCTACCACTTGTATGAGCAT 60.684 44.000 0.00 0.00 41.54 3.79
145 146 4.382040 GCTCTTCTACCACTTGTATGAGCA 60.382 45.833 0.00 0.00 41.54 4.26
146 147 4.116238 GCTCTTCTACCACTTGTATGAGC 58.884 47.826 0.00 0.00 38.61 4.26
147 148 5.126222 TGAGCTCTTCTACCACTTGTATGAG 59.874 44.000 16.19 0.00 0.00 2.90
148 149 5.016831 TGAGCTCTTCTACCACTTGTATGA 58.983 41.667 16.19 0.00 0.00 2.15
149 150 5.105752 GTGAGCTCTTCTACCACTTGTATG 58.894 45.833 16.19 0.00 0.00 2.39
150 151 4.160626 GGTGAGCTCTTCTACCACTTGTAT 59.839 45.833 16.19 0.00 33.42 2.29
151 152 3.510360 GGTGAGCTCTTCTACCACTTGTA 59.490 47.826 16.19 0.00 33.42 2.41
152 153 2.300437 GGTGAGCTCTTCTACCACTTGT 59.700 50.000 16.19 0.00 33.42 3.16
153 154 2.564947 AGGTGAGCTCTTCTACCACTTG 59.435 50.000 19.88 0.00 35.66 3.16
155 156 2.614134 AGGTGAGCTCTTCTACCACT 57.386 50.000 19.88 1.18 35.66 4.00
156 157 6.466885 TTATAAGGTGAGCTCTTCTACCAC 57.533 41.667 19.88 7.23 35.66 4.16
157 158 6.895756 TCTTTATAAGGTGAGCTCTTCTACCA 59.104 38.462 19.88 4.08 35.66 3.25
158 159 7.349412 TCTTTATAAGGTGAGCTCTTCTACC 57.651 40.000 16.19 13.86 0.00 3.18
159 160 7.068962 ACCTCTTTATAAGGTGAGCTCTTCTAC 59.931 40.741 16.19 4.19 45.50 2.59
161 162 5.961421 ACCTCTTTATAAGGTGAGCTCTTCT 59.039 40.000 16.19 9.33 45.50 2.85
162 163 6.228616 ACCTCTTTATAAGGTGAGCTCTTC 57.771 41.667 16.19 8.05 45.50 2.87
173 174 6.872920 AGAGAGAGTTGCACCTCTTTATAAG 58.127 40.000 15.62 0.00 41.85 1.73
174 175 6.437477 TGAGAGAGAGTTGCACCTCTTTATAA 59.563 38.462 15.62 0.00 41.85 0.98
175 176 5.952347 TGAGAGAGAGTTGCACCTCTTTATA 59.048 40.000 15.62 0.00 41.85 0.98
176 177 4.774726 TGAGAGAGAGTTGCACCTCTTTAT 59.225 41.667 15.62 6.95 41.85 1.40
177 178 4.152647 TGAGAGAGAGTTGCACCTCTTTA 58.847 43.478 15.62 0.00 41.85 1.85
178 179 2.968574 TGAGAGAGAGTTGCACCTCTTT 59.031 45.455 15.62 9.81 41.85 2.52
179 180 2.603021 TGAGAGAGAGTTGCACCTCTT 58.397 47.619 15.62 5.53 41.85 2.85
180 181 2.298729 GTTGAGAGAGAGTTGCACCTCT 59.701 50.000 14.36 14.36 44.44 3.69
182 183 2.324541 AGTTGAGAGAGAGTTGCACCT 58.675 47.619 0.00 0.00 0.00 4.00
183 184 2.829741 AGTTGAGAGAGAGTTGCACC 57.170 50.000 0.00 0.00 0.00 5.01
184 185 3.183373 CGAAAGTTGAGAGAGAGTTGCAC 59.817 47.826 0.00 0.00 0.00 4.57
185 186 3.384668 CGAAAGTTGAGAGAGAGTTGCA 58.615 45.455 0.00 0.00 0.00 4.08
186 187 2.734079 CCGAAAGTTGAGAGAGAGTTGC 59.266 50.000 0.00 0.00 0.00 4.17
188 189 2.300437 CCCCGAAAGTTGAGAGAGAGTT 59.700 50.000 0.00 0.00 0.00 3.01
190 191 1.896465 ACCCCGAAAGTTGAGAGAGAG 59.104 52.381 0.00 0.00 0.00 3.20
191 192 1.618837 CACCCCGAAAGTTGAGAGAGA 59.381 52.381 0.00 0.00 0.00 3.10
192 193 1.338200 CCACCCCGAAAGTTGAGAGAG 60.338 57.143 0.00 0.00 0.00 3.20
194 195 0.321653 CCCACCCCGAAAGTTGAGAG 60.322 60.000 0.00 0.00 0.00 3.20
196 197 0.605589 GTCCCACCCCGAAAGTTGAG 60.606 60.000 0.00 0.00 0.00 3.02
197 198 1.057851 AGTCCCACCCCGAAAGTTGA 61.058 55.000 0.00 0.00 0.00 3.18
198 199 0.688487 TAGTCCCACCCCGAAAGTTG 59.312 55.000 0.00 0.00 0.00 3.16
199 200 1.350019 CTTAGTCCCACCCCGAAAGTT 59.650 52.381 0.00 0.00 0.00 2.66
200 201 0.981943 CTTAGTCCCACCCCGAAAGT 59.018 55.000 0.00 0.00 0.00 2.66
201 202 0.981943 ACTTAGTCCCACCCCGAAAG 59.018 55.000 0.00 0.00 0.00 2.62
202 203 1.437397 AACTTAGTCCCACCCCGAAA 58.563 50.000 0.00 0.00 0.00 3.46
203 204 1.437397 AAACTTAGTCCCACCCCGAA 58.563 50.000 0.00 0.00 0.00 4.30
204 205 1.437397 AAAACTTAGTCCCACCCCGA 58.563 50.000 0.00 0.00 0.00 5.14
205 206 2.303890 ACTAAAACTTAGTCCCACCCCG 59.696 50.000 0.00 0.00 0.00 5.73
207 208 4.285260 TGAGACTAAAACTTAGTCCCACCC 59.715 45.833 18.50 7.69 43.61 4.61
208 209 5.236282 GTGAGACTAAAACTTAGTCCCACC 58.764 45.833 21.44 10.25 43.22 4.61
211 212 7.894708 AGTTAGTGAGACTAAAACTTAGTCCC 58.105 38.462 18.50 10.77 41.80 4.46
212 213 8.028354 GGAGTTAGTGAGACTAAAACTTAGTCC 58.972 40.741 18.50 12.55 41.80 3.85
213 214 8.574737 TGGAGTTAGTGAGACTAAAACTTAGTC 58.425 37.037 15.64 15.64 41.80 2.59
215 216 8.578151 AGTGGAGTTAGTGAGACTAAAACTTAG 58.422 37.037 0.00 0.00 41.80 2.18
216 217 8.474710 AGTGGAGTTAGTGAGACTAAAACTTA 57.525 34.615 0.00 0.00 41.80 2.24
217 218 7.069578 TGAGTGGAGTTAGTGAGACTAAAACTT 59.930 37.037 0.00 0.00 41.80 2.66
219 220 6.746120 TGAGTGGAGTTAGTGAGACTAAAAC 58.254 40.000 0.00 0.00 41.80 2.43
220 221 6.971726 TGAGTGGAGTTAGTGAGACTAAAA 57.028 37.500 0.00 0.00 41.80 1.52
222 223 7.834681 ACATATGAGTGGAGTTAGTGAGACTAA 59.165 37.037 10.38 0.00 38.28 2.24
223 224 7.283354 CACATATGAGTGGAGTTAGTGAGACTA 59.717 40.741 10.38 0.00 35.88 2.59
224 225 6.096141 CACATATGAGTGGAGTTAGTGAGACT 59.904 42.308 10.38 0.00 35.88 3.24
228 229 5.624509 GCACACATATGAGTGGAGTTAGTGA 60.625 44.000 27.51 0.00 43.72 3.41
230 231 4.222810 TGCACACATATGAGTGGAGTTAGT 59.777 41.667 27.51 2.66 43.72 2.24
231 232 4.758688 TGCACACATATGAGTGGAGTTAG 58.241 43.478 27.51 7.55 43.72 2.34
232 233 4.817318 TGCACACATATGAGTGGAGTTA 57.183 40.909 27.51 1.43 43.72 2.24
233 234 3.701205 TGCACACATATGAGTGGAGTT 57.299 42.857 27.51 0.00 43.72 3.01
235 236 3.800531 TCATGCACACATATGAGTGGAG 58.199 45.455 27.51 19.81 43.72 3.86
236 237 3.910568 TCATGCACACATATGAGTGGA 57.089 42.857 27.51 26.23 43.72 4.02
238 239 5.278604 CCAATTCATGCACACATATGAGTG 58.721 41.667 23.99 23.99 44.93 3.51
240 241 4.295870 GCCAATTCATGCACACATATGAG 58.704 43.478 10.38 3.79 35.01 2.90
241 242 3.068448 GGCCAATTCATGCACACATATGA 59.932 43.478 10.38 0.00 33.67 2.15
242 243 3.181474 TGGCCAATTCATGCACACATATG 60.181 43.478 0.61 0.00 33.67 1.78
243 244 3.032459 TGGCCAATTCATGCACACATAT 58.968 40.909 0.61 0.00 33.67 1.78
245 246 1.268066 TGGCCAATTCATGCACACAT 58.732 45.000 0.61 0.00 36.79 3.21
246 247 1.001068 CTTGGCCAATTCATGCACACA 59.999 47.619 20.85 0.00 0.00 3.72
248 249 1.546923 CTCTTGGCCAATTCATGCACA 59.453 47.619 20.85 0.00 0.00 4.57
250 251 2.219080 TCTCTTGGCCAATTCATGCA 57.781 45.000 20.85 0.00 0.00 3.96
251 252 3.814005 ATTCTCTTGGCCAATTCATGC 57.186 42.857 20.85 0.00 0.00 4.06
252 253 5.726397 TGAAATTCTCTTGGCCAATTCATG 58.274 37.500 20.85 7.02 0.00 3.07
253 254 5.718130 TCTGAAATTCTCTTGGCCAATTCAT 59.282 36.000 23.43 10.84 0.00 2.57
255 256 5.649782 TCTGAAATTCTCTTGGCCAATTC 57.350 39.130 20.85 18.39 0.00 2.17
256 257 6.616237 ATTCTGAAATTCTCTTGGCCAATT 57.384 33.333 20.85 9.27 0.00 2.32
257 258 6.616237 AATTCTGAAATTCTCTTGGCCAAT 57.384 33.333 20.85 0.88 28.70 3.16
258 259 6.423776 AAATTCTGAAATTCTCTTGGCCAA 57.576 33.333 19.25 19.25 33.93 4.52
259 260 6.423776 AAAATTCTGAAATTCTCTTGGCCA 57.576 33.333 0.00 0.00 33.93 5.36
260 261 7.606349 ACTAAAATTCTGAAATTCTCTTGGCC 58.394 34.615 0.00 0.00 33.93 5.36
261 262 8.919661 CAACTAAAATTCTGAAATTCTCTTGGC 58.080 33.333 0.00 0.00 33.93 4.52
262 263 9.415544 CCAACTAAAATTCTGAAATTCTCTTGG 57.584 33.333 0.00 1.19 33.93 3.61
263 264 9.415544 CCCAACTAAAATTCTGAAATTCTCTTG 57.584 33.333 0.00 0.00 33.93 3.02
264 265 8.090831 GCCCAACTAAAATTCTGAAATTCTCTT 58.909 33.333 0.00 0.00 33.93 2.85
265 266 7.452813 AGCCCAACTAAAATTCTGAAATTCTCT 59.547 33.333 0.00 0.00 33.93 3.10
266 267 7.606349 AGCCCAACTAAAATTCTGAAATTCTC 58.394 34.615 0.00 0.00 33.93 2.87
268 269 8.498358 CAAAGCCCAACTAAAATTCTGAAATTC 58.502 33.333 0.00 0.00 33.93 2.17
269 270 7.445096 CCAAAGCCCAACTAAAATTCTGAAATT 59.555 33.333 0.00 0.00 36.64 1.82
270 271 6.936335 CCAAAGCCCAACTAAAATTCTGAAAT 59.064 34.615 0.00 0.00 0.00 2.17
271 272 6.287525 CCAAAGCCCAACTAAAATTCTGAAA 58.712 36.000 0.00 0.00 0.00 2.69
272 273 5.221621 CCCAAAGCCCAACTAAAATTCTGAA 60.222 40.000 0.00 0.00 0.00 3.02
273 274 4.283212 CCCAAAGCCCAACTAAAATTCTGA 59.717 41.667 0.00 0.00 0.00 3.27
274 275 4.568956 CCCAAAGCCCAACTAAAATTCTG 58.431 43.478 0.00 0.00 0.00 3.02
275 276 3.007940 GCCCAAAGCCCAACTAAAATTCT 59.992 43.478 0.00 0.00 34.35 2.40
276 277 3.334691 GCCCAAAGCCCAACTAAAATTC 58.665 45.455 0.00 0.00 34.35 2.17
277 278 3.417069 GCCCAAAGCCCAACTAAAATT 57.583 42.857 0.00 0.00 34.35 1.82
297 298 3.567478 ATTTTGCTAGTAGGCCTCTGG 57.433 47.619 9.68 9.94 0.00 3.86
300 301 6.598064 TGTTTAGAATTTTGCTAGTAGGCCTC 59.402 38.462 9.68 0.21 0.00 4.70
332 333 7.881751 TCACTCGTATAAGTATGTATAGCCAGT 59.118 37.037 0.00 0.00 0.00 4.00
333 334 8.265165 TCACTCGTATAAGTATGTATAGCCAG 57.735 38.462 0.00 0.00 0.00 4.85
336 337 9.544314 CTGTTCACTCGTATAAGTATGTATAGC 57.456 37.037 0.00 0.00 0.00 2.97
340 341 8.393366 GTGTCTGTTCACTCGTATAAGTATGTA 58.607 37.037 0.00 0.00 35.68 2.29
341 342 7.094506 TGTGTCTGTTCACTCGTATAAGTATGT 60.095 37.037 0.00 0.00 38.90 2.29
350 2454 5.952526 TCTTATGTGTCTGTTCACTCGTA 57.047 39.130 0.00 0.00 38.90 3.43
371 2475 0.577269 GGATGCATGTAGACGCGTTC 59.423 55.000 15.53 6.92 0.00 3.95
412 2516 9.468532 GTCCCTTCATTTCAAATTATAAGATGC 57.531 33.333 0.00 0.00 0.00 3.91
425 2529 1.626321 TGTAGGCGTCCCTTCATTTCA 59.374 47.619 0.00 0.00 42.87 2.69
436 2540 4.119442 TCTTTGGATTAGTGTAGGCGTC 57.881 45.455 0.00 0.00 0.00 5.19
437 2541 4.755266 ATCTTTGGATTAGTGTAGGCGT 57.245 40.909 0.00 0.00 0.00 5.68
438 2542 6.085555 TCTATCTTTGGATTAGTGTAGGCG 57.914 41.667 0.00 0.00 33.71 5.52
439 2543 8.732746 TTTTCTATCTTTGGATTAGTGTAGGC 57.267 34.615 0.00 0.00 33.71 3.93
452 2559 4.100529 CGGTGCTGCATTTTCTATCTTTG 58.899 43.478 5.27 0.00 0.00 2.77
475 2582 2.923020 GTGGCATTTTAAACGCTGGATG 59.077 45.455 8.31 0.95 0.00 3.51
481 2588 4.739716 CCAGATATGTGGCATTTTAAACGC 59.260 41.667 5.87 0.97 0.00 4.84
482 2589 5.971202 GTCCAGATATGTGGCATTTTAAACG 59.029 40.000 14.09 0.00 37.53 3.60
511 10210 3.315470 AGCTTCTTTCTCGTTCAAAACCC 59.685 43.478 0.00 0.00 0.00 4.11
513 10212 5.235401 AGAGAGCTTCTTTCTCGTTCAAAAC 59.765 40.000 0.00 0.00 44.53 2.43
641 12620 2.388121 GTACGTGGTATGGCATCGTAC 58.612 52.381 24.32 24.32 45.55 3.67
677 12656 3.143515 TGTGTTTGGCCGCTGCAA 61.144 55.556 1.55 0.00 40.13 4.08
678 12657 3.898509 GTGTGTTTGGCCGCTGCA 61.899 61.111 1.55 0.00 40.13 4.41
687 12666 3.240606 CTCCGCTGCCGTGTGTTTG 62.241 63.158 0.00 0.00 0.00 2.93
688 12667 2.972505 CTCCGCTGCCGTGTGTTT 60.973 61.111 0.00 0.00 0.00 2.83
696 12675 3.240134 TTCCAGTGACTCCGCTGCC 62.240 63.158 0.00 0.00 46.65 4.85
704 12683 2.050144 TCCTTTCTGCTTCCAGTGACT 58.950 47.619 0.00 0.00 40.09 3.41
729 12708 3.944055 TCCCTCGTCTCTTTTCTCTTG 57.056 47.619 0.00 0.00 0.00 3.02
771 12750 1.132817 AGGGTGTCTCTTGTAGTGGGT 60.133 52.381 0.00 0.00 0.00 4.51
776 12755 0.250513 GCCCAGGGTGTCTCTTGTAG 59.749 60.000 7.55 0.00 0.00 2.74
777 12756 1.198759 GGCCCAGGGTGTCTCTTGTA 61.199 60.000 7.55 0.00 0.00 2.41
886 12890 1.802365 GCCGGGCGGTTTAATATACTG 59.198 52.381 1.81 0.00 37.65 2.74
910 12914 2.748605 CGAGATTGGGGAAAGATCGAG 58.251 52.381 0.00 0.00 33.62 4.04
911 12915 1.202533 GCGAGATTGGGGAAAGATCGA 60.203 52.381 0.00 0.00 33.62 3.59
917 12921 1.378514 GGCTGCGAGATTGGGGAAA 60.379 57.895 0.00 0.00 0.00 3.13
1482 13514 2.978489 CAACTTCGTCTCCAGAACGTAC 59.022 50.000 0.00 0.00 0.00 3.67
1488 13520 1.671742 GCCCAACTTCGTCTCCAGA 59.328 57.895 0.00 0.00 0.00 3.86
1845 13877 4.218578 CTCATGAGCTCGGCGGCT 62.219 66.667 20.09 20.09 46.11 5.52
1925 13957 6.385759 TGACAGATAAAAGGGGCACTAATCTA 59.614 38.462 8.39 0.00 0.00 1.98
1937 13980 6.064060 TGGGCTGAATATGACAGATAAAAGG 58.936 40.000 12.47 0.00 37.54 3.11
1940 13983 5.474532 GCATGGGCTGAATATGACAGATAAA 59.525 40.000 12.47 0.00 37.54 1.40
1943 13986 3.418995 GCATGGGCTGAATATGACAGAT 58.581 45.455 12.47 0.00 37.54 2.90
1968 14011 4.725758 GACATTTGTCGTGCGAGC 57.274 55.556 0.00 0.00 35.12 5.03
1990 14033 1.236628 ACACAAGAGACGTCGTAGCT 58.763 50.000 10.46 3.73 0.00 3.32
1999 14042 6.467723 AACATATCGTCAAACACAAGAGAC 57.532 37.500 0.00 0.00 0.00 3.36
2001 14044 8.443160 ACATAAACATATCGTCAAACACAAGAG 58.557 33.333 0.00 0.00 0.00 2.85
2031 14074 5.947566 TGATTTGATTGATGGACAGTGATGT 59.052 36.000 0.00 0.00 0.00 3.06
2106 14274 2.278330 CCCCTGCAGCCTTCCAAAC 61.278 63.158 8.66 0.00 0.00 2.93
2235 14403 4.841813 ATCAGGGAAATCCTCCTCTAGA 57.158 45.455 0.00 0.00 46.12 2.43
2380 14551 6.406692 TCTGATAAGTCATAACTAGCCACC 57.593 41.667 0.00 0.00 33.48 4.61
2406 14577 6.616947 TGTTGGCGTCCAAAATTATTAGAAG 58.383 36.000 12.01 0.00 45.73 2.85
2440 14611 1.218316 GGTTACCCCTGAGCTGACG 59.782 63.158 0.00 0.00 0.00 4.35
2459 14631 0.577269 GGGAATGATCGTTTCGCTCG 59.423 55.000 14.34 0.00 34.30 5.03
2468 14640 1.228063 CTGCCTGGGGGAATGATCG 60.228 63.158 0.00 0.00 33.58 3.69
2495 14667 7.698970 TCTTTTTGCGATCGAACTTTTTAGTTT 59.301 29.630 21.57 0.00 31.35 2.66
2499 14671 7.972623 TTTCTTTTTGCGATCGAACTTTTTA 57.027 28.000 21.57 0.00 0.00 1.52
2502 14674 6.879188 TTTTTCTTTTTGCGATCGAACTTT 57.121 29.167 21.57 0.00 0.00 2.66
2553 14728 5.576384 GGCAATTTTATCTGTTTTCGCATGA 59.424 36.000 0.00 0.00 0.00 3.07
2594 14769 4.572985 TTTCACTTCAGAACATGGCAAG 57.427 40.909 0.00 0.00 0.00 4.01
2607 14783 6.187125 TCTGAGCATAGCAATTTTCACTTC 57.813 37.500 0.00 0.00 0.00 3.01
2612 14788 9.525409 ACAATATTTCTGAGCATAGCAATTTTC 57.475 29.630 0.00 0.00 0.00 2.29
2621 14797 8.615211 GTCAACATGACAATATTTCTGAGCATA 58.385 33.333 0.00 0.00 46.22 3.14
2638 14814 3.057596 GCAATTTCCTTCGGTCAACATGA 60.058 43.478 0.00 0.00 0.00 3.07
2648 14824 2.223572 GGTAGCATGGCAATTTCCTTCG 60.224 50.000 0.00 0.00 0.00 3.79
2654 14830 3.133362 CCATTGAGGTAGCATGGCAATTT 59.867 43.478 0.00 0.00 0.00 1.82
2669 14845 5.106830 GGCAATTTTCAGCTTTTCCATTGAG 60.107 40.000 6.59 0.00 0.00 3.02
2674 14850 3.834489 TGGCAATTTTCAGCTTTTCCA 57.166 38.095 0.00 0.00 0.00 3.53
2712 14889 1.173043 GAACACATTCCGGATGGCAA 58.827 50.000 4.15 0.00 40.21 4.52
2721 14898 3.121778 GCAAAAATGAGCGAACACATTCC 59.878 43.478 0.00 0.00 36.26 3.01
2772 14949 2.933878 AAAGTGTTCGCTCCCACGCA 62.934 55.000 0.00 0.00 36.69 5.24
2775 14952 1.001633 TCCTAAAGTGTTCGCTCCCAC 59.998 52.381 0.00 0.00 0.00 4.61
2802 14980 0.322816 GAGGCAAGTTGGATCCTGCA 60.323 55.000 21.42 0.86 0.00 4.41
2821 14999 1.293924 CAATCAGAGCTAACGCCCTG 58.706 55.000 0.00 0.00 42.72 4.45
2835 15013 3.994392 GAGGTCACGTTCTTAAGCAATCA 59.006 43.478 0.00 0.00 0.00 2.57
2846 15024 5.706916 TGTTATAGAACTGAGGTCACGTTC 58.293 41.667 0.00 11.36 36.45 3.95
2894 15073 9.872684 ATTCTTTGATACCATCATCTAACCATT 57.127 29.630 0.00 0.00 39.39 3.16
3172 15676 0.814812 GGCAGCAAGCTGGAGAGATC 60.815 60.000 22.20 4.83 43.77 2.75
3296 15800 1.664151 GCGGCTGGTATTACTTGTGTC 59.336 52.381 0.00 0.00 0.00 3.67
3313 15817 0.519519 TACTGTGCAAAATTCGGCGG 59.480 50.000 7.21 0.00 0.00 6.13
3396 15900 6.067263 GGTGTTAATCAGCAACAACTGTAA 57.933 37.500 0.00 0.00 39.89 2.41
3606 16132 3.648009 GTCCTCTCTGATTATTGCCTCG 58.352 50.000 0.00 0.00 0.00 4.63
3678 16204 2.507484 CCAGCAAGGTTCTTGATCACA 58.493 47.619 11.35 0.00 0.00 3.58
3936 16462 8.040132 TGACTGACAATCAACATATGTCACATA 58.960 33.333 9.23 0.00 46.11 2.29
3937 16463 6.880529 TGACTGACAATCAACATATGTCACAT 59.119 34.615 9.23 0.00 46.11 3.21
3938 16464 6.229733 TGACTGACAATCAACATATGTCACA 58.770 36.000 9.23 0.00 46.11 3.58
3939 16465 6.726258 TGACTGACAATCAACATATGTCAC 57.274 37.500 9.23 0.00 46.11 3.67
3941 16467 6.017605 GGGATGACTGACAATCAACATATGTC 60.018 42.308 9.23 0.00 42.90 3.06
3942 16468 5.824624 GGGATGACTGACAATCAACATATGT 59.175 40.000 1.41 1.41 0.00 2.29
3943 16469 5.240183 GGGGATGACTGACAATCAACATATG 59.760 44.000 0.00 0.00 0.00 1.78
3944 16470 5.133322 AGGGGATGACTGACAATCAACATAT 59.867 40.000 0.00 0.00 0.00 1.78
3958 16495 6.833933 GTGGATAACAAAATAAGGGGATGACT 59.166 38.462 0.00 0.00 0.00 3.41
3961 16498 5.009610 CCGTGGATAACAAAATAAGGGGATG 59.990 44.000 0.00 0.00 0.00 3.51
3964 16501 4.528920 TCCGTGGATAACAAAATAAGGGG 58.471 43.478 0.00 0.00 0.00 4.79
3985 16522 6.309737 GGTCTGAAGTGCAAAATTCATCAATC 59.690 38.462 9.84 0.00 35.04 2.67
3994 16531 2.242043 CCAGGGTCTGAAGTGCAAAAT 58.758 47.619 0.00 0.00 32.44 1.82
4014 16551 5.712152 ATCAATGGTTCTTCACAAAGGAC 57.288 39.130 0.00 0.00 39.91 3.85
4098 16635 6.676990 ACAGCATGATAGATGATACCAAGA 57.323 37.500 0.00 0.00 39.69 3.02
4108 16645 9.833917 CATTATAGGATCAACAGCATGATAGAT 57.166 33.333 0.00 0.00 40.08 1.98
4109 16646 8.262933 CCATTATAGGATCAACAGCATGATAGA 58.737 37.037 0.00 0.00 40.08 1.98
4224 16870 0.666913 CAAGCCCTATGCATGACAGC 59.333 55.000 10.16 7.08 41.13 4.40
4247 16893 5.979517 TCTATATCGTGCTTCATGACAACAG 59.020 40.000 0.00 0.00 31.87 3.16
4283 16964 7.693969 ATTCTAAAGAACAAGCAAGCATAGT 57.306 32.000 0.00 0.00 36.80 2.12
4326 17012 9.176460 CCACAAAGGAATAATAAAATTGGCATT 57.824 29.630 0.00 0.00 41.22 3.56
4327 17013 7.774625 CCCACAAAGGAATAATAAAATTGGCAT 59.225 33.333 0.00 0.00 41.22 4.40
4343 17030 3.486383 GAGAACAATGTCCCACAAAGGA 58.514 45.455 0.00 0.00 41.22 3.36
4411 17104 2.415512 ACGAAAACAATAGCGAGAAGGC 59.584 45.455 0.00 0.00 0.00 4.35
4413 17106 4.903638 TGACGAAAACAATAGCGAGAAG 57.096 40.909 0.00 0.00 0.00 2.85
4415 17108 4.490743 TGATGACGAAAACAATAGCGAGA 58.509 39.130 0.00 0.00 0.00 4.04
4449 17151 3.802948 AACAGATAACTGCCGGTCTAG 57.197 47.619 1.90 1.76 46.95 2.43
4486 17188 4.640805 AATAGCAAACACGACGTTACAG 57.359 40.909 0.00 0.00 36.59 2.74
4525 17227 3.476552 CCAATTATGTACAGGGCGATGT 58.523 45.455 0.33 0.00 37.19 3.06
4615 17323 4.082274 TGCATTTCGATCATCACAACAC 57.918 40.909 0.00 0.00 0.00 3.32
4829 17537 5.882000 CCTGGATCTGTTGTATTTCATGTGA 59.118 40.000 0.00 0.00 0.00 3.58
4917 17631 4.692228 ACATTTCGTTTTGTCCATTTGCT 58.308 34.783 0.00 0.00 0.00 3.91
4986 17708 4.790765 GGAATCAACTTTCCTTCCTTGG 57.209 45.455 0.00 0.00 41.69 3.61
4996 17718 2.582052 TCCACGCAAGGAATCAACTTT 58.418 42.857 0.00 0.00 46.39 2.66
5011 17749 0.528901 CATTGCCATGCCATTCCACG 60.529 55.000 0.00 0.00 0.00 4.94
5056 17794 2.480419 CCAGACAAACTGTTCATCCGAC 59.520 50.000 0.00 0.00 44.40 4.79
5067 17805 2.248248 TGACCGATCTCCAGACAAACT 58.752 47.619 0.00 0.00 0.00 2.66
5148 17886 9.435688 AACATCAAGAAAATAAAAATAGGCCAC 57.564 29.630 5.01 0.00 0.00 5.01
5160 17898 4.075682 TGCGGGACAACATCAAGAAAATA 58.924 39.130 0.00 0.00 0.00 1.40
5161 17899 2.890311 TGCGGGACAACATCAAGAAAAT 59.110 40.909 0.00 0.00 0.00 1.82
5165 17903 0.107643 TGTGCGGGACAACATCAAGA 59.892 50.000 0.00 0.00 0.00 3.02
5166 17904 0.518636 CTGTGCGGGACAACATCAAG 59.481 55.000 3.39 0.00 32.80 3.02
5233 17975 2.027003 TGGACGAAAACAACGAAGGT 57.973 45.000 0.00 0.00 34.70 3.50
5247 17989 3.374058 CAGGGTAATGTAAGCTTTGGACG 59.626 47.826 3.20 0.00 0.00 4.79
5267 18009 6.719365 CAGTAACAGAAAGGAACAGAAACAG 58.281 40.000 0.00 0.00 0.00 3.16
5279 18025 2.303022 TCCTGGAGGCAGTAACAGAAAG 59.697 50.000 0.00 0.00 32.86 2.62
5280 18026 2.334977 TCCTGGAGGCAGTAACAGAAA 58.665 47.619 0.00 0.00 32.86 2.52
5281 18027 2.024176 TCCTGGAGGCAGTAACAGAA 57.976 50.000 0.00 0.00 32.86 3.02
5282 18028 2.024176 TTCCTGGAGGCAGTAACAGA 57.976 50.000 0.00 0.00 32.86 3.41
5283 18029 2.636830 CATTCCTGGAGGCAGTAACAG 58.363 52.381 0.00 0.00 34.44 3.16
5284 18030 1.340017 GCATTCCTGGAGGCAGTAACA 60.340 52.381 15.09 0.00 34.44 2.41
5285 18031 1.065126 AGCATTCCTGGAGGCAGTAAC 60.065 52.381 20.13 0.00 34.44 2.50
5286 18032 1.289160 AGCATTCCTGGAGGCAGTAA 58.711 50.000 20.13 0.00 34.44 2.24
5287 18033 1.065199 CAAGCATTCCTGGAGGCAGTA 60.065 52.381 20.13 0.00 34.44 2.74
5288 18034 0.323178 CAAGCATTCCTGGAGGCAGT 60.323 55.000 20.13 8.39 34.44 4.40
5289 18035 0.323178 ACAAGCATTCCTGGAGGCAG 60.323 55.000 20.13 15.19 34.44 4.85
5290 18036 0.991146 TACAAGCATTCCTGGAGGCA 59.009 50.000 20.13 0.00 34.44 4.75
5291 18037 1.065126 ACTACAAGCATTCCTGGAGGC 60.065 52.381 12.85 12.85 34.44 4.70
5292 18038 3.452627 ACTACTACAAGCATTCCTGGAGG 59.547 47.826 0.00 0.00 0.00 4.30
5295 18041 5.730550 TGTTACTACTACAAGCATTCCTGG 58.269 41.667 0.00 0.00 0.00 4.45
5356 18102 1.000896 CCAAGGGCAACAGGTAGGG 60.001 63.158 0.00 0.00 39.74 3.53
5403 18149 4.701171 GGGTAAAATTATCACGGACCACAA 59.299 41.667 0.00 0.00 0.00 3.33
5529 18275 9.856488 TTCTTAACATATACTCTGACAGAACAC 57.144 33.333 6.61 0.00 0.00 3.32
5564 18312 0.824595 TGAGTGCTGCCATGCTTGTT 60.825 50.000 0.00 0.00 0.00 2.83
5606 18360 6.594159 GCTAAGCCAAGAGTGTCAAGTATTTA 59.406 38.462 0.00 0.00 0.00 1.40
5609 18363 4.020218 TGCTAAGCCAAGAGTGTCAAGTAT 60.020 41.667 0.00 0.00 0.00 2.12
5610 18364 3.323691 TGCTAAGCCAAGAGTGTCAAGTA 59.676 43.478 0.00 0.00 0.00 2.24
5611 18365 2.104792 TGCTAAGCCAAGAGTGTCAAGT 59.895 45.455 0.00 0.00 0.00 3.16
5614 18368 1.694150 ACTGCTAAGCCAAGAGTGTCA 59.306 47.619 0.00 0.00 0.00 3.58
5631 18385 1.973281 ATGGCTTTGGTGGCGACTG 60.973 57.895 0.00 0.00 35.06 3.51
5672 19163 4.616373 GCTCAAGTATATACGTGCTCCTCC 60.616 50.000 20.15 4.89 35.98 4.30
5673 19164 4.023107 TGCTCAAGTATATACGTGCTCCTC 60.023 45.833 20.15 9.79 35.98 3.71
5688 19179 2.972713 TGTACCCTCTTTCTGCTCAAGT 59.027 45.455 0.00 0.00 0.00 3.16
5692 19183 1.404315 CCGTGTACCCTCTTTCTGCTC 60.404 57.143 0.00 0.00 0.00 4.26
5700 19191 2.490165 CGATCACCGTGTACCCTCT 58.510 57.895 0.00 0.00 0.00 3.69
5710 19201 0.999406 GACCACAATCACGATCACCG 59.001 55.000 0.00 0.00 45.44 4.94
5711 19202 1.732259 GTGACCACAATCACGATCACC 59.268 52.381 0.00 0.00 39.69 4.02
5754 19307 3.852572 GCTGTACCGGACGAATAGATGAC 60.853 52.174 9.46 0.00 0.00 3.06
5788 19341 0.248866 CTTCAACCAAACACACGGGC 60.249 55.000 0.00 0.00 0.00 6.13
5792 19345 3.380004 TCCATGACTTCAACCAAACACAC 59.620 43.478 0.00 0.00 0.00 3.82
5793 19346 3.380004 GTCCATGACTTCAACCAAACACA 59.620 43.478 0.00 0.00 0.00 3.72
5795 19348 2.955660 GGTCCATGACTTCAACCAAACA 59.044 45.455 0.00 0.00 32.47 2.83
5796 19349 3.222603 AGGTCCATGACTTCAACCAAAC 58.777 45.455 0.00 0.00 32.47 2.93
5798 19351 4.567537 CCATAGGTCCATGACTTCAACCAA 60.568 45.833 0.00 0.00 32.47 3.67
5801 19354 2.945668 GCCATAGGTCCATGACTTCAAC 59.054 50.000 0.00 0.00 32.47 3.18
5802 19355 2.092429 GGCCATAGGTCCATGACTTCAA 60.092 50.000 0.00 0.00 32.47 2.69
5803 19356 1.490490 GGCCATAGGTCCATGACTTCA 59.510 52.381 0.00 0.00 32.47 3.02
5805 19358 0.469917 CGGCCATAGGTCCATGACTT 59.530 55.000 2.24 0.00 32.47 3.01
5806 19359 1.410850 CCGGCCATAGGTCCATGACT 61.411 60.000 2.24 0.00 32.47 3.41
5808 19361 2.146724 CCCGGCCATAGGTCCATGA 61.147 63.158 2.24 0.00 0.00 3.07
5810 19363 3.570212 GCCCGGCCATAGGTCCAT 61.570 66.667 2.24 0.00 0.00 3.41
5812 19365 4.564110 GTGCCCGGCCATAGGTCC 62.564 72.222 7.03 0.00 0.00 4.46
5829 19396 3.473625 GATGTATAAGACCGGTTTGGGG 58.526 50.000 9.42 0.00 44.64 4.96
5831 19398 3.128349 CGGATGTATAAGACCGGTTTGG 58.872 50.000 9.42 0.00 46.41 3.28
5837 19404 1.068748 CCGACCGGATGTATAAGACCG 60.069 57.143 9.46 0.00 44.16 4.79
5838 19405 1.271656 CCCGACCGGATGTATAAGACC 59.728 57.143 9.46 0.00 37.50 3.85
5840 19407 0.963962 GCCCGACCGGATGTATAAGA 59.036 55.000 9.46 0.00 37.50 2.10
5853 19420 4.101448 ATGACCAGGCAGCCCGAC 62.101 66.667 8.22 0.00 35.76 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.