Multiple sequence alignment - TraesCS5A01G268200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G268200 chr5A 100.000 3387 0 0 1 3387 478994147 478990761 0.000000e+00 6255.0
1 TraesCS5A01G268200 chr5A 84.727 550 49 13 615 1141 479232690 479232153 5.890000e-143 518.0
2 TraesCS5A01G268200 chr5A 100.000 272 0 0 3703 3974 478990445 478990174 1.650000e-138 503.0
3 TraesCS5A01G268200 chr5A 75.000 724 147 31 1962 2671 479047435 479048138 1.790000e-78 303.0
4 TraesCS5A01G268200 chr5A 91.964 112 9 0 1028 1139 479046980 479047091 1.480000e-34 158.0
5 TraesCS5A01G268200 chr5A 88.785 107 12 0 1033 1139 479204970 479204864 8.960000e-27 132.0
6 TraesCS5A01G268200 chr5B 92.192 1524 78 20 1773 3271 454403880 454402373 0.000000e+00 2117.0
7 TraesCS5A01G268200 chr5B 93.311 1196 65 9 2193 3380 454491533 454490345 0.000000e+00 1751.0
8 TraesCS5A01G268200 chr5B 92.456 623 37 6 591 1206 454407580 454406961 0.000000e+00 881.0
9 TraesCS5A01G268200 chr5B 94.165 497 24 2 1651 2145 454492143 454491650 0.000000e+00 752.0
10 TraesCS5A01G268200 chr5B 88.368 619 30 12 593 1206 454492765 454492184 0.000000e+00 706.0
11 TraesCS5A01G268200 chr5B 94.253 261 15 0 3714 3974 454490271 454490011 2.220000e-107 399.0
12 TraesCS5A01G268200 chr5B 75.527 711 134 34 1961 2662 454476882 454477561 2.980000e-81 313.0
13 TraesCS5A01G268200 chr5B 74.898 733 142 31 1961 2671 454636954 454637666 3.000000e-76 296.0
14 TraesCS5A01G268200 chr5B 90.909 165 12 1 3813 3974 454376224 454376060 6.690000e-53 219.0
15 TraesCS5A01G268200 chr5B 94.203 138 8 0 1640 1777 454406933 454406796 1.120000e-50 211.0
16 TraesCS5A01G268200 chr5B 75.499 351 67 14 2241 2581 454654236 454653895 1.910000e-33 154.0
17 TraesCS5A01G268200 chr5B 86.087 115 15 1 1036 1149 75018717 75018831 5.390000e-24 122.0
18 TraesCS5A01G268200 chr5B 89.474 95 10 0 1036 1130 455147778 455147684 1.940000e-23 121.0
19 TraesCS5A01G268200 chr5B 83.000 100 14 3 3233 3331 685613746 685613649 1.970000e-13 87.9
20 TraesCS5A01G268200 chr5D 82.708 1440 168 52 1665 3069 378898946 378897553 0.000000e+00 1205.0
21 TraesCS5A01G268200 chr5D 92.432 621 33 5 614 1233 378899667 378899060 0.000000e+00 874.0
22 TraesCS5A01G268200 chr5D 73.653 1336 273 63 1670 2967 378956811 378958105 1.010000e-120 444.0
23 TraesCS5A01G268200 chr5D 77.922 462 69 25 2234 2678 378996970 378996525 1.420000e-64 257.0
24 TraesCS5A01G268200 chr5D 87.619 105 13 0 1037 1141 379220072 379219968 5.390000e-24 122.0
25 TraesCS5A01G268200 chr5D 100.000 28 0 0 560 587 378907790 378907763 7.000000e-03 52.8
26 TraesCS5A01G268200 chr6A 99.286 560 4 0 1 560 410561404 410560845 0.000000e+00 1013.0
27 TraesCS5A01G268200 chr6A 98.750 560 7 0 1 560 580329635 580330194 0.000000e+00 996.0
28 TraesCS5A01G268200 chrUn 99.107 560 5 0 1 560 332173087 332172528 0.000000e+00 1007.0
29 TraesCS5A01G268200 chr7A 99.107 560 5 0 1 560 101408270 101407711 0.000000e+00 1007.0
30 TraesCS5A01G268200 chr7A 80.808 99 12 6 3829 3925 603332504 603332597 1.980000e-08 71.3
31 TraesCS5A01G268200 chr4A 99.107 560 5 0 1 560 740820352 740819793 0.000000e+00 1007.0
32 TraesCS5A01G268200 chr2B 98.929 560 6 0 1 560 28240436 28240995 0.000000e+00 1002.0
33 TraesCS5A01G268200 chr2B 98.752 561 7 0 1 561 246066460 246065900 0.000000e+00 998.0
34 TraesCS5A01G268200 chr6B 98.584 565 7 1 1 565 604747371 604746808 0.000000e+00 998.0
35 TraesCS5A01G268200 chr6B 82.796 93 14 2 3235 3326 643834215 643834124 9.150000e-12 82.4
36 TraesCS5A01G268200 chr7D 89.483 561 56 3 1 561 573395070 573394513 0.000000e+00 706.0
37 TraesCS5A01G268200 chr7D 86.420 81 9 2 3239 3318 410123814 410123735 1.970000e-13 87.9
38 TraesCS5A01G268200 chr7D 94.872 39 2 0 3779 3817 523057783 523057821 1.190000e-05 62.1
39 TraesCS5A01G268200 chr1A 89.474 95 10 0 1036 1130 586720496 586720402 1.940000e-23 121.0
40 TraesCS5A01G268200 chr1A 81.818 77 13 1 3254 3329 22485770 22485846 3.320000e-06 63.9
41 TraesCS5A01G268200 chr2D 82.278 79 14 0 3254 3332 599921194 599921116 7.130000e-08 69.4
42 TraesCS5A01G268200 chr3D 81.176 85 15 1 3233 3316 598624127 598624043 2.560000e-07 67.6
43 TraesCS5A01G268200 chr1D 82.192 73 12 1 3254 3326 461742149 461742220 1.190000e-05 62.1
44 TraesCS5A01G268200 chr2A 82.609 69 8 3 3263 3331 151264648 151264584 1.540000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G268200 chr5A 478990174 478994147 3973 True 3379.000000 6255 100.000000 1 3974 2 chr5A.!!$R3 3973
1 TraesCS5A01G268200 chr5A 479232153 479232690 537 True 518.000000 518 84.727000 615 1141 1 chr5A.!!$R2 526
2 TraesCS5A01G268200 chr5A 479046980 479048138 1158 False 230.500000 303 83.482000 1028 2671 2 chr5A.!!$F1 1643
3 TraesCS5A01G268200 chr5B 454402373 454407580 5207 True 1069.666667 2117 92.950333 591 3271 3 chr5B.!!$R5 2680
4 TraesCS5A01G268200 chr5B 454490011 454492765 2754 True 902.000000 1751 92.524250 593 3974 4 chr5B.!!$R6 3381
5 TraesCS5A01G268200 chr5B 454476882 454477561 679 False 313.000000 313 75.527000 1961 2662 1 chr5B.!!$F2 701
6 TraesCS5A01G268200 chr5B 454636954 454637666 712 False 296.000000 296 74.898000 1961 2671 1 chr5B.!!$F3 710
7 TraesCS5A01G268200 chr5D 378897553 378899667 2114 True 1039.500000 1205 87.570000 614 3069 2 chr5D.!!$R4 2455
8 TraesCS5A01G268200 chr5D 378956811 378958105 1294 False 444.000000 444 73.653000 1670 2967 1 chr5D.!!$F1 1297
9 TraesCS5A01G268200 chr6A 410560845 410561404 559 True 1013.000000 1013 99.286000 1 560 1 chr6A.!!$R1 559
10 TraesCS5A01G268200 chr6A 580329635 580330194 559 False 996.000000 996 98.750000 1 560 1 chr6A.!!$F1 559
11 TraesCS5A01G268200 chrUn 332172528 332173087 559 True 1007.000000 1007 99.107000 1 560 1 chrUn.!!$R1 559
12 TraesCS5A01G268200 chr7A 101407711 101408270 559 True 1007.000000 1007 99.107000 1 560 1 chr7A.!!$R1 559
13 TraesCS5A01G268200 chr4A 740819793 740820352 559 True 1007.000000 1007 99.107000 1 560 1 chr4A.!!$R1 559
14 TraesCS5A01G268200 chr2B 28240436 28240995 559 False 1002.000000 1002 98.929000 1 560 1 chr2B.!!$F1 559
15 TraesCS5A01G268200 chr2B 246065900 246066460 560 True 998.000000 998 98.752000 1 561 1 chr2B.!!$R1 560
16 TraesCS5A01G268200 chr6B 604746808 604747371 563 True 998.000000 998 98.584000 1 565 1 chr6B.!!$R1 564
17 TraesCS5A01G268200 chr7D 573394513 573395070 557 True 706.000000 706 89.483000 1 561 1 chr7D.!!$R2 560

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.250381 GCTCTCTGGGCATCATGAGG 60.250 60.0 2.22 2.22 0.0 3.86 F
1248 1281 0.033405 TTCCTCTACCACCTCCTCCG 60.033 60.0 0.00 0.00 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1350 1383 0.107456 GGATCCACGGTGATCATGCT 59.893 55.0 10.28 0.0 42.41 3.79 R
3029 6110 0.036952 AGACGCTGGATTGGTGTGAG 60.037 55.0 0.00 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.250381 GCTCTCTGGGCATCATGAGG 60.250 60.000 2.22 2.22 0.00 3.86
125 126 2.316586 GGGGGATTCCTCCTTGGCA 61.317 63.158 14.98 0.00 41.74 4.92
330 331 4.450757 CACGTGTTGGAGATAACATGACAA 59.549 41.667 7.58 0.00 45.82 3.18
561 562 2.604855 CGCACGGGCATTCTACTAGTAG 60.605 54.545 21.87 21.87 41.24 2.57
562 563 2.361438 GCACGGGCATTCTACTAGTAGT 59.639 50.000 25.58 8.14 40.72 2.73
563 564 3.795826 GCACGGGCATTCTACTAGTAGTG 60.796 52.174 25.58 19.28 40.72 2.74
564 565 3.380637 CACGGGCATTCTACTAGTAGTGT 59.619 47.826 25.58 14.69 34.84 3.55
565 566 4.577693 CACGGGCATTCTACTAGTAGTGTA 59.422 45.833 25.58 14.68 34.84 2.90
566 567 5.241064 CACGGGCATTCTACTAGTAGTGTAT 59.759 44.000 25.58 16.00 34.84 2.29
567 568 6.429078 CACGGGCATTCTACTAGTAGTGTATA 59.571 42.308 25.58 6.94 34.84 1.47
568 569 6.429385 ACGGGCATTCTACTAGTAGTGTATAC 59.571 42.308 25.58 14.32 34.84 1.47
569 570 6.654161 CGGGCATTCTACTAGTAGTGTATACT 59.346 42.308 25.58 0.00 40.99 2.12
570 571 7.361031 CGGGCATTCTACTAGTAGTGTATACTG 60.361 44.444 25.58 13.44 37.78 2.74
571 572 7.447853 GGGCATTCTACTAGTAGTGTATACTGT 59.552 40.741 25.58 0.00 37.78 3.55
572 573 8.291032 GGCATTCTACTAGTAGTGTATACTGTG 58.709 40.741 25.58 14.04 37.78 3.66
573 574 7.804129 GCATTCTACTAGTAGTGTATACTGTGC 59.196 40.741 25.58 18.18 37.78 4.57
574 575 7.798596 TTCTACTAGTAGTGTATACTGTGCC 57.201 40.000 25.58 0.00 37.78 5.01
575 576 5.987953 TCTACTAGTAGTGTATACTGTGCCG 59.012 44.000 25.58 0.00 37.78 5.69
576 577 4.774124 ACTAGTAGTGTATACTGTGCCGA 58.226 43.478 0.85 0.00 37.78 5.54
577 578 4.574013 ACTAGTAGTGTATACTGTGCCGAC 59.426 45.833 0.85 0.00 37.78 4.79
578 579 3.349927 AGTAGTGTATACTGTGCCGACA 58.650 45.455 1.82 0.00 37.78 4.35
579 580 3.760151 AGTAGTGTATACTGTGCCGACAA 59.240 43.478 1.82 0.00 37.78 3.18
580 581 3.671008 AGTGTATACTGTGCCGACAAA 57.329 42.857 4.17 0.00 35.34 2.83
581 582 3.997762 AGTGTATACTGTGCCGACAAAA 58.002 40.909 4.17 0.00 35.34 2.44
582 583 3.994392 AGTGTATACTGTGCCGACAAAAG 59.006 43.478 4.17 0.00 35.34 2.27
583 584 3.991773 GTGTATACTGTGCCGACAAAAGA 59.008 43.478 4.17 0.00 0.00 2.52
584 585 4.630069 GTGTATACTGTGCCGACAAAAGAT 59.370 41.667 4.17 0.00 0.00 2.40
585 586 5.808540 GTGTATACTGTGCCGACAAAAGATA 59.191 40.000 4.17 0.00 0.00 1.98
586 587 5.808540 TGTATACTGTGCCGACAAAAGATAC 59.191 40.000 4.17 0.00 0.00 2.24
587 588 3.120321 ACTGTGCCGACAAAAGATACA 57.880 42.857 0.00 0.00 0.00 2.29
588 589 3.472652 ACTGTGCCGACAAAAGATACAA 58.527 40.909 0.00 0.00 0.00 2.41
589 590 3.880490 ACTGTGCCGACAAAAGATACAAA 59.120 39.130 0.00 0.00 0.00 2.83
610 611 2.947118 TAGTGCCGGCGCGATAACTG 62.947 60.000 32.68 0.00 38.08 3.16
659 660 2.342956 GCAAAGCGATCAAGTTGCG 58.657 52.632 8.07 0.00 42.42 4.85
748 749 8.942338 TTTGCGTATCAGAAACTATAATCAGT 57.058 30.769 0.00 0.00 0.00 3.41
827 844 1.454276 CAAACGCTGATTCGTACGTGT 59.546 47.619 16.05 4.95 42.46 4.49
828 845 1.057636 AACGCTGATTCGTACGTGTG 58.942 50.000 16.05 10.26 42.46 3.82
886 904 3.650950 GGCTGCTTCCCTGACCCA 61.651 66.667 0.00 0.00 0.00 4.51
967 993 1.290203 CTCTGTGGTGTGTGTGTGTC 58.710 55.000 0.00 0.00 0.00 3.67
968 994 0.610687 TCTGTGGTGTGTGTGTGTCA 59.389 50.000 0.00 0.00 0.00 3.58
1017 1046 1.371183 CATGGTCGGGCGTATGGAT 59.629 57.895 0.00 0.00 0.00 3.41
1023 1052 2.032681 GGGCGTATGGATGGAGCC 59.967 66.667 0.00 0.00 46.51 4.70
1026 1055 0.886490 GGCGTATGGATGGAGCCAAG 60.886 60.000 0.00 0.00 46.48 3.61
1212 1245 4.208686 GGTCTCGGCTCGGCGAAT 62.209 66.667 12.13 0.00 0.00 3.34
1234 1267 4.097361 GGCCACCCCGACTTCCTC 62.097 72.222 0.00 0.00 0.00 3.71
1235 1268 3.003763 GCCACCCCGACTTCCTCT 61.004 66.667 0.00 0.00 0.00 3.69
1236 1269 1.684734 GCCACCCCGACTTCCTCTA 60.685 63.158 0.00 0.00 0.00 2.43
1238 1271 1.328430 CCACCCCGACTTCCTCTACC 61.328 65.000 0.00 0.00 0.00 3.18
1239 1272 0.613853 CACCCCGACTTCCTCTACCA 60.614 60.000 0.00 0.00 0.00 3.25
1240 1273 0.614134 ACCCCGACTTCCTCTACCAC 60.614 60.000 0.00 0.00 0.00 4.16
1241 1274 1.328430 CCCCGACTTCCTCTACCACC 61.328 65.000 0.00 0.00 0.00 4.61
1242 1275 0.324460 CCCGACTTCCTCTACCACCT 60.324 60.000 0.00 0.00 0.00 4.00
1243 1276 1.104630 CCGACTTCCTCTACCACCTC 58.895 60.000 0.00 0.00 0.00 3.85
1244 1277 1.104630 CGACTTCCTCTACCACCTCC 58.895 60.000 0.00 0.00 0.00 4.30
1245 1278 1.341187 CGACTTCCTCTACCACCTCCT 60.341 57.143 0.00 0.00 0.00 3.69
1247 1280 1.007359 ACTTCCTCTACCACCTCCTCC 59.993 57.143 0.00 0.00 0.00 4.30
1248 1281 0.033405 TTCCTCTACCACCTCCTCCG 60.033 60.000 0.00 0.00 0.00 4.63
1249 1282 2.128507 CCTCTACCACCTCCTCCGC 61.129 68.421 0.00 0.00 0.00 5.54
1250 1283 2.439701 TCTACCACCTCCTCCGCG 60.440 66.667 0.00 0.00 0.00 6.46
1276 1309 4.803426 CACCGAGCCTGCTCCGAC 62.803 72.222 13.23 0.00 39.77 4.79
1287 1320 2.760385 CTCCGACCCCACCCTCTC 60.760 72.222 0.00 0.00 0.00 3.20
1288 1321 4.393778 TCCGACCCCACCCTCTCC 62.394 72.222 0.00 0.00 0.00 3.71
1289 1322 4.715130 CCGACCCCACCCTCTCCA 62.715 72.222 0.00 0.00 0.00 3.86
1290 1323 3.077556 CGACCCCACCCTCTCCAG 61.078 72.222 0.00 0.00 0.00 3.86
1291 1324 2.450243 GACCCCACCCTCTCCAGA 59.550 66.667 0.00 0.00 0.00 3.86
1292 1325 1.003573 GACCCCACCCTCTCCAGAT 59.996 63.158 0.00 0.00 0.00 2.90
1293 1326 0.621862 GACCCCACCCTCTCCAGATT 60.622 60.000 0.00 0.00 0.00 2.40
1294 1327 0.178831 ACCCCACCCTCTCCAGATTT 60.179 55.000 0.00 0.00 0.00 2.17
1295 1328 1.002857 CCCCACCCTCTCCAGATTTT 58.997 55.000 0.00 0.00 0.00 1.82
1296 1329 1.359130 CCCCACCCTCTCCAGATTTTT 59.641 52.381 0.00 0.00 0.00 1.94
1297 1330 2.621668 CCCCACCCTCTCCAGATTTTTC 60.622 54.545 0.00 0.00 0.00 2.29
1298 1331 2.621668 CCCACCCTCTCCAGATTTTTCC 60.622 54.545 0.00 0.00 0.00 3.13
1299 1332 2.310052 CCACCCTCTCCAGATTTTTCCT 59.690 50.000 0.00 0.00 0.00 3.36
1300 1333 3.245407 CCACCCTCTCCAGATTTTTCCTT 60.245 47.826 0.00 0.00 0.00 3.36
1301 1334 4.013050 CACCCTCTCCAGATTTTTCCTTC 58.987 47.826 0.00 0.00 0.00 3.46
1302 1335 3.919554 ACCCTCTCCAGATTTTTCCTTCT 59.080 43.478 0.00 0.00 0.00 2.85
1303 1336 4.355287 ACCCTCTCCAGATTTTTCCTTCTT 59.645 41.667 0.00 0.00 0.00 2.52
1304 1337 5.162936 ACCCTCTCCAGATTTTTCCTTCTTT 60.163 40.000 0.00 0.00 0.00 2.52
1305 1338 5.184671 CCCTCTCCAGATTTTTCCTTCTTTG 59.815 44.000 0.00 0.00 0.00 2.77
1306 1339 6.006449 CCTCTCCAGATTTTTCCTTCTTTGA 58.994 40.000 0.00 0.00 0.00 2.69
1307 1340 6.491403 CCTCTCCAGATTTTTCCTTCTTTGAA 59.509 38.462 0.00 0.00 0.00 2.69
1308 1341 7.178097 CCTCTCCAGATTTTTCCTTCTTTGAAT 59.822 37.037 0.00 0.00 0.00 2.57
1309 1342 7.889469 TCTCCAGATTTTTCCTTCTTTGAATG 58.111 34.615 0.00 0.00 0.00 2.67
1310 1343 6.996509 TCCAGATTTTTCCTTCTTTGAATGG 58.003 36.000 0.00 0.00 0.00 3.16
1311 1344 6.014327 TCCAGATTTTTCCTTCTTTGAATGGG 60.014 38.462 0.00 0.00 0.00 4.00
1312 1345 6.014327 CCAGATTTTTCCTTCTTTGAATGGGA 60.014 38.462 0.00 0.00 0.00 4.37
1313 1346 6.870439 CAGATTTTTCCTTCTTTGAATGGGAC 59.130 38.462 0.00 0.00 0.00 4.46
1326 1359 3.993382 TGGGACACAAGTCGGTTAC 57.007 52.632 0.00 0.00 45.92 2.50
1327 1360 1.121378 TGGGACACAAGTCGGTTACA 58.879 50.000 0.00 0.00 45.92 2.41
1328 1361 1.695242 TGGGACACAAGTCGGTTACAT 59.305 47.619 0.00 0.00 45.92 2.29
1329 1362 2.289195 TGGGACACAAGTCGGTTACATC 60.289 50.000 0.00 0.00 45.92 3.06
1330 1363 1.990563 GGACACAAGTCGGTTACATCG 59.009 52.381 0.00 0.00 45.92 3.84
1331 1364 1.990563 GACACAAGTCGGTTACATCGG 59.009 52.381 0.00 0.00 34.60 4.18
1332 1365 1.342174 ACACAAGTCGGTTACATCGGT 59.658 47.619 0.00 0.00 0.00 4.69
1333 1366 1.990563 CACAAGTCGGTTACATCGGTC 59.009 52.381 0.00 0.00 0.00 4.79
1334 1367 1.614903 ACAAGTCGGTTACATCGGTCA 59.385 47.619 0.00 0.00 0.00 4.02
1335 1368 2.036217 ACAAGTCGGTTACATCGGTCAA 59.964 45.455 0.00 0.00 0.00 3.18
1336 1369 2.649331 AGTCGGTTACATCGGTCAAG 57.351 50.000 0.00 0.00 0.00 3.02
1337 1370 1.203994 AGTCGGTTACATCGGTCAAGG 59.796 52.381 0.00 0.00 0.00 3.61
1338 1371 1.067354 GTCGGTTACATCGGTCAAGGT 60.067 52.381 0.00 0.00 0.00 3.50
1339 1372 1.067425 TCGGTTACATCGGTCAAGGTG 60.067 52.381 0.00 0.00 0.00 4.00
1340 1373 1.337447 CGGTTACATCGGTCAAGGTGT 60.337 52.381 0.00 0.00 0.00 4.16
1341 1374 2.344025 GGTTACATCGGTCAAGGTGTC 58.656 52.381 0.00 0.00 0.00 3.67
1342 1375 2.289195 GGTTACATCGGTCAAGGTGTCA 60.289 50.000 0.00 0.00 0.00 3.58
1343 1376 3.596214 GTTACATCGGTCAAGGTGTCAT 58.404 45.455 0.00 0.00 0.00 3.06
1344 1377 2.386661 ACATCGGTCAAGGTGTCATC 57.613 50.000 0.00 0.00 0.00 2.92
1345 1378 1.902508 ACATCGGTCAAGGTGTCATCT 59.097 47.619 0.00 0.00 0.00 2.90
1346 1379 3.096852 ACATCGGTCAAGGTGTCATCTA 58.903 45.455 0.00 0.00 0.00 1.98
1347 1380 3.119101 ACATCGGTCAAGGTGTCATCTAC 60.119 47.826 0.00 0.00 0.00 2.59
1348 1381 2.521126 TCGGTCAAGGTGTCATCTACA 58.479 47.619 0.00 0.00 35.06 2.74
1349 1382 3.096852 TCGGTCAAGGTGTCATCTACAT 58.903 45.455 0.00 0.00 41.10 2.29
1350 1383 4.274978 TCGGTCAAGGTGTCATCTACATA 58.725 43.478 0.00 0.00 41.10 2.29
1351 1384 4.338400 TCGGTCAAGGTGTCATCTACATAG 59.662 45.833 0.00 0.00 41.10 2.23
1352 1385 4.372656 GGTCAAGGTGTCATCTACATAGC 58.627 47.826 0.00 0.00 41.10 2.97
1353 1386 4.141937 GGTCAAGGTGTCATCTACATAGCA 60.142 45.833 0.00 0.00 41.10 3.49
1354 1387 5.453903 GGTCAAGGTGTCATCTACATAGCAT 60.454 44.000 0.00 0.00 41.10 3.79
1355 1388 5.464722 GTCAAGGTGTCATCTACATAGCATG 59.535 44.000 0.00 0.00 41.10 4.06
1356 1389 5.363580 TCAAGGTGTCATCTACATAGCATGA 59.636 40.000 0.00 0.00 41.10 3.07
1357 1390 6.042437 TCAAGGTGTCATCTACATAGCATGAT 59.958 38.462 0.00 0.00 41.10 2.45
1358 1391 6.035368 AGGTGTCATCTACATAGCATGATC 57.965 41.667 0.00 0.00 41.10 2.92
1359 1392 5.541484 AGGTGTCATCTACATAGCATGATCA 59.459 40.000 0.00 0.00 41.10 2.92
1360 1393 5.636965 GGTGTCATCTACATAGCATGATCAC 59.363 44.000 0.00 14.85 41.10 3.06
1361 1394 5.636965 GTGTCATCTACATAGCATGATCACC 59.363 44.000 0.00 0.00 41.10 4.02
1362 1395 4.861462 GTCATCTACATAGCATGATCACCG 59.139 45.833 0.00 0.00 0.00 4.94
1363 1396 4.524328 TCATCTACATAGCATGATCACCGT 59.476 41.667 0.00 0.00 0.00 4.83
1364 1397 4.243007 TCTACATAGCATGATCACCGTG 57.757 45.455 0.00 0.00 34.90 4.94
1365 1398 2.245159 ACATAGCATGATCACCGTGG 57.755 50.000 0.00 0.00 32.41 4.94
1366 1399 1.762370 ACATAGCATGATCACCGTGGA 59.238 47.619 0.00 0.00 32.41 4.02
1367 1400 2.369860 ACATAGCATGATCACCGTGGAT 59.630 45.455 0.00 0.00 32.41 3.41
1368 1401 2.820059 TAGCATGATCACCGTGGATC 57.180 50.000 0.00 6.61 43.19 3.36
1369 1402 0.107456 AGCATGATCACCGTGGATCC 59.893 55.000 4.20 4.20 42.41 3.36
1370 1403 0.179048 GCATGATCACCGTGGATCCA 60.179 55.000 11.44 11.44 42.41 3.41
1371 1404 1.875009 CATGATCACCGTGGATCCAG 58.125 55.000 16.81 7.12 42.41 3.86
1372 1405 1.413812 CATGATCACCGTGGATCCAGA 59.586 52.381 16.81 9.49 42.41 3.86
1373 1406 1.793414 TGATCACCGTGGATCCAGAT 58.207 50.000 16.81 14.36 42.41 2.90
1374 1407 2.118679 TGATCACCGTGGATCCAGATT 58.881 47.619 16.81 0.00 42.41 2.40
1375 1408 2.103094 TGATCACCGTGGATCCAGATTC 59.897 50.000 16.81 1.77 42.41 2.52
1376 1409 0.830648 TCACCGTGGATCCAGATTCC 59.169 55.000 16.81 1.33 0.00 3.01
1377 1410 0.530650 CACCGTGGATCCAGATTCCG 60.531 60.000 16.81 14.69 0.00 4.30
1378 1411 1.069765 CCGTGGATCCAGATTCCGG 59.930 63.158 22.02 22.02 0.00 5.14
1379 1412 1.686325 CCGTGGATCCAGATTCCGGT 61.686 60.000 25.27 0.00 30.45 5.28
1380 1413 0.178068 CGTGGATCCAGATTCCGGTT 59.822 55.000 16.81 0.00 0.00 4.44
1381 1414 1.806623 CGTGGATCCAGATTCCGGTTC 60.807 57.143 16.81 0.00 0.00 3.62
1382 1415 0.837272 TGGATCCAGATTCCGGTTCC 59.163 55.000 11.44 8.55 41.18 3.62
1383 1416 0.108774 GGATCCAGATTCCGGTTCCC 59.891 60.000 6.95 0.00 36.69 3.97
1384 1417 0.108774 GATCCAGATTCCGGTTCCCC 59.891 60.000 0.00 0.00 0.00 4.81
1394 1427 3.998156 GGTTCCCCGGAAAAGCTC 58.002 61.111 0.73 0.00 35.75 4.09
1395 1428 2.038837 GGTTCCCCGGAAAAGCTCG 61.039 63.158 0.73 0.00 35.75 5.03
1396 1429 1.004200 GTTCCCCGGAAAAGCTCGA 60.004 57.895 0.73 0.00 35.75 4.04
1397 1430 0.392595 GTTCCCCGGAAAAGCTCGAT 60.393 55.000 0.73 0.00 35.75 3.59
1398 1431 0.107848 TTCCCCGGAAAAGCTCGATC 60.108 55.000 0.73 0.00 0.00 3.69
1399 1432 0.976073 TCCCCGGAAAAGCTCGATCT 60.976 55.000 0.73 0.00 0.00 2.75
1400 1433 0.107654 CCCCGGAAAAGCTCGATCTT 60.108 55.000 0.73 0.00 0.00 2.40
1401 1434 1.291132 CCCGGAAAAGCTCGATCTTC 58.709 55.000 0.73 0.00 0.00 2.87
1402 1435 1.134670 CCCGGAAAAGCTCGATCTTCT 60.135 52.381 0.73 0.00 0.00 2.85
1403 1436 2.100916 CCCGGAAAAGCTCGATCTTCTA 59.899 50.000 0.73 0.00 0.00 2.10
1404 1437 3.117046 CCGGAAAAGCTCGATCTTCTAC 58.883 50.000 1.35 0.00 0.00 2.59
1405 1438 3.181485 CCGGAAAAGCTCGATCTTCTACT 60.181 47.826 1.35 0.00 0.00 2.57
1406 1439 3.794028 CGGAAAAGCTCGATCTTCTACTG 59.206 47.826 1.35 0.00 0.00 2.74
1407 1440 4.675671 CGGAAAAGCTCGATCTTCTACTGT 60.676 45.833 1.35 0.00 0.00 3.55
1408 1441 5.172205 GGAAAAGCTCGATCTTCTACTGTT 58.828 41.667 1.35 0.00 0.00 3.16
1409 1442 5.062809 GGAAAAGCTCGATCTTCTACTGTTG 59.937 44.000 1.35 0.00 0.00 3.33
1410 1443 4.792521 AAGCTCGATCTTCTACTGTTGT 57.207 40.909 0.00 0.00 0.00 3.32
1411 1444 4.792521 AGCTCGATCTTCTACTGTTGTT 57.207 40.909 0.00 0.00 0.00 2.83
1412 1445 5.899120 AGCTCGATCTTCTACTGTTGTTA 57.101 39.130 0.00 0.00 0.00 2.41
1413 1446 5.885881 AGCTCGATCTTCTACTGTTGTTAG 58.114 41.667 0.00 0.00 0.00 2.34
1414 1447 5.416326 AGCTCGATCTTCTACTGTTGTTAGT 59.584 40.000 0.00 0.00 34.71 2.24
1415 1448 6.071840 AGCTCGATCTTCTACTGTTGTTAGTT 60.072 38.462 0.00 0.00 32.19 2.24
1416 1449 6.034044 GCTCGATCTTCTACTGTTGTTAGTTG 59.966 42.308 0.00 0.00 32.19 3.16
1417 1450 6.978338 TCGATCTTCTACTGTTGTTAGTTGT 58.022 36.000 0.00 0.00 32.19 3.32
1418 1451 7.431249 TCGATCTTCTACTGTTGTTAGTTGTT 58.569 34.615 0.00 0.00 32.19 2.83
1419 1452 8.570488 TCGATCTTCTACTGTTGTTAGTTGTTA 58.430 33.333 0.00 0.00 32.19 2.41
1420 1453 8.636843 CGATCTTCTACTGTTGTTAGTTGTTAC 58.363 37.037 0.00 0.00 32.19 2.50
1421 1454 8.828688 ATCTTCTACTGTTGTTAGTTGTTACC 57.171 34.615 0.00 0.00 32.19 2.85
1422 1455 8.015185 TCTTCTACTGTTGTTAGTTGTTACCT 57.985 34.615 0.00 0.00 32.19 3.08
1423 1456 7.924412 TCTTCTACTGTTGTTAGTTGTTACCTG 59.076 37.037 0.00 0.00 32.19 4.00
1424 1457 7.116075 TCTACTGTTGTTAGTTGTTACCTGT 57.884 36.000 0.00 0.00 32.19 4.00
1425 1458 7.558604 TCTACTGTTGTTAGTTGTTACCTGTT 58.441 34.615 0.00 0.00 32.19 3.16
1426 1459 6.673154 ACTGTTGTTAGTTGTTACCTGTTC 57.327 37.500 0.00 0.00 0.00 3.18
1427 1460 6.412214 ACTGTTGTTAGTTGTTACCTGTTCT 58.588 36.000 0.00 0.00 0.00 3.01
1428 1461 6.537660 ACTGTTGTTAGTTGTTACCTGTTCTC 59.462 38.462 0.00 0.00 0.00 2.87
1429 1462 6.646267 TGTTGTTAGTTGTTACCTGTTCTCT 58.354 36.000 0.00 0.00 0.00 3.10
1430 1463 6.537301 TGTTGTTAGTTGTTACCTGTTCTCTG 59.463 38.462 0.00 0.00 0.00 3.35
1431 1464 5.607477 TGTTAGTTGTTACCTGTTCTCTGG 58.393 41.667 0.00 0.00 38.41 3.86
1432 1465 3.771577 AGTTGTTACCTGTTCTCTGGG 57.228 47.619 0.00 0.00 37.05 4.45
1433 1466 2.372172 AGTTGTTACCTGTTCTCTGGGG 59.628 50.000 0.00 0.00 37.05 4.96
1434 1467 2.105993 GTTGTTACCTGTTCTCTGGGGT 59.894 50.000 0.00 0.00 37.05 4.95
1435 1468 2.414612 TGTTACCTGTTCTCTGGGGTT 58.585 47.619 0.00 0.00 37.05 4.11
1436 1469 3.589641 TGTTACCTGTTCTCTGGGGTTA 58.410 45.455 0.00 0.00 37.05 2.85
1437 1470 4.172807 TGTTACCTGTTCTCTGGGGTTAT 58.827 43.478 0.00 0.00 37.05 1.89
1438 1471 4.224370 TGTTACCTGTTCTCTGGGGTTATC 59.776 45.833 0.00 0.00 37.05 1.75
1439 1472 3.207044 ACCTGTTCTCTGGGGTTATCT 57.793 47.619 0.00 0.00 37.05 1.98
1440 1473 2.840651 ACCTGTTCTCTGGGGTTATCTG 59.159 50.000 0.00 0.00 37.05 2.90
1441 1474 2.171448 CCTGTTCTCTGGGGTTATCTGG 59.829 54.545 0.00 0.00 0.00 3.86
1442 1475 3.107601 CTGTTCTCTGGGGTTATCTGGA 58.892 50.000 0.00 0.00 0.00 3.86
1443 1476 2.838202 TGTTCTCTGGGGTTATCTGGAC 59.162 50.000 0.00 0.00 0.00 4.02
1444 1477 1.776662 TCTCTGGGGTTATCTGGACG 58.223 55.000 0.00 0.00 0.00 4.79
1445 1478 1.006758 TCTCTGGGGTTATCTGGACGT 59.993 52.381 0.00 0.00 0.00 4.34
1446 1479 1.409427 CTCTGGGGTTATCTGGACGTC 59.591 57.143 7.13 7.13 0.00 4.34
1447 1480 1.006758 TCTGGGGTTATCTGGACGTCT 59.993 52.381 16.46 0.00 0.00 4.18
1448 1481 1.137086 CTGGGGTTATCTGGACGTCTG 59.863 57.143 16.46 9.04 0.00 3.51
1449 1482 0.464452 GGGGTTATCTGGACGTCTGG 59.536 60.000 16.46 8.64 0.00 3.86
1450 1483 0.179081 GGGTTATCTGGACGTCTGGC 60.179 60.000 16.46 0.00 0.00 4.85
1451 1484 0.824759 GGTTATCTGGACGTCTGGCT 59.175 55.000 16.46 2.95 0.00 4.75
1452 1485 1.471676 GGTTATCTGGACGTCTGGCTG 60.472 57.143 16.46 3.26 0.00 4.85
1453 1486 1.476891 GTTATCTGGACGTCTGGCTGA 59.523 52.381 16.46 8.76 0.00 4.26
1454 1487 2.073252 TATCTGGACGTCTGGCTGAT 57.927 50.000 16.46 14.91 0.00 2.90
1455 1488 0.463204 ATCTGGACGTCTGGCTGATG 59.537 55.000 16.46 11.55 37.69 3.07
1456 1489 0.611896 TCTGGACGTCTGGCTGATGA 60.612 55.000 16.46 0.08 35.71 2.92
1457 1490 0.247460 CTGGACGTCTGGCTGATGAA 59.753 55.000 16.46 4.85 35.71 2.57
1458 1491 0.247460 TGGACGTCTGGCTGATGAAG 59.753 55.000 16.46 4.52 35.71 3.02
1459 1492 0.247736 GGACGTCTGGCTGATGAAGT 59.752 55.000 16.46 7.38 35.71 3.01
1460 1493 1.476891 GGACGTCTGGCTGATGAAGTA 59.523 52.381 16.46 0.00 35.71 2.24
1461 1494 2.480416 GGACGTCTGGCTGATGAAGTAG 60.480 54.545 16.46 0.00 35.71 2.57
1462 1495 1.134965 ACGTCTGGCTGATGAAGTAGC 60.135 52.381 18.94 0.00 39.17 3.58
1463 1496 1.565305 GTCTGGCTGATGAAGTAGCG 58.435 55.000 0.00 0.00 40.78 4.26
1464 1497 1.134965 GTCTGGCTGATGAAGTAGCGT 60.135 52.381 0.00 0.00 40.78 5.07
1465 1498 1.134995 TCTGGCTGATGAAGTAGCGTG 60.135 52.381 0.00 0.00 40.78 5.34
1466 1499 0.108186 TGGCTGATGAAGTAGCGTGG 60.108 55.000 0.00 0.00 40.78 4.94
1467 1500 0.811616 GGCTGATGAAGTAGCGTGGG 60.812 60.000 0.00 0.00 40.78 4.61
1468 1501 0.175760 GCTGATGAAGTAGCGTGGGA 59.824 55.000 0.00 0.00 0.00 4.37
1469 1502 1.202580 GCTGATGAAGTAGCGTGGGAT 60.203 52.381 0.00 0.00 0.00 3.85
1470 1503 2.748605 CTGATGAAGTAGCGTGGGATC 58.251 52.381 0.00 0.00 0.00 3.36
1471 1504 2.363680 CTGATGAAGTAGCGTGGGATCT 59.636 50.000 0.00 0.00 0.00 2.75
1472 1505 2.101415 TGATGAAGTAGCGTGGGATCTG 59.899 50.000 0.00 0.00 0.00 2.90
1473 1506 0.824109 TGAAGTAGCGTGGGATCTGG 59.176 55.000 0.00 0.00 0.00 3.86
1474 1507 0.824759 GAAGTAGCGTGGGATCTGGT 59.175 55.000 0.00 0.00 0.00 4.00
1475 1508 0.537188 AAGTAGCGTGGGATCTGGTG 59.463 55.000 0.00 0.00 0.00 4.17
1476 1509 0.614979 AGTAGCGTGGGATCTGGTGT 60.615 55.000 0.00 0.00 0.00 4.16
1477 1510 0.249398 GTAGCGTGGGATCTGGTGTT 59.751 55.000 0.00 0.00 0.00 3.32
1478 1511 0.535335 TAGCGTGGGATCTGGTGTTC 59.465 55.000 0.00 0.00 0.00 3.18
1479 1512 1.745489 GCGTGGGATCTGGTGTTCC 60.745 63.158 0.00 0.00 0.00 3.62
1480 1513 1.983224 CGTGGGATCTGGTGTTCCT 59.017 57.895 0.00 0.00 33.63 3.36
1481 1514 0.391661 CGTGGGATCTGGTGTTCCTG 60.392 60.000 0.00 0.00 33.63 3.86
1482 1515 0.693049 GTGGGATCTGGTGTTCCTGT 59.307 55.000 0.00 0.00 33.63 4.00
1483 1516 1.073923 GTGGGATCTGGTGTTCCTGTT 59.926 52.381 0.00 0.00 33.63 3.16
1484 1517 1.780309 TGGGATCTGGTGTTCCTGTTT 59.220 47.619 0.00 0.00 33.63 2.83
1485 1518 2.983192 TGGGATCTGGTGTTCCTGTTTA 59.017 45.455 0.00 0.00 33.63 2.01
1486 1519 3.396276 TGGGATCTGGTGTTCCTGTTTAA 59.604 43.478 0.00 0.00 33.63 1.52
1487 1520 4.010349 GGGATCTGGTGTTCCTGTTTAAG 58.990 47.826 0.00 0.00 33.63 1.85
1488 1521 3.440522 GGATCTGGTGTTCCTGTTTAAGC 59.559 47.826 0.00 0.00 34.80 3.09
1489 1522 3.857157 TCTGGTGTTCCTGTTTAAGCT 57.143 42.857 0.00 0.00 34.80 3.74
1490 1523 4.967084 TCTGGTGTTCCTGTTTAAGCTA 57.033 40.909 0.00 0.00 34.80 3.32
1491 1524 4.638304 TCTGGTGTTCCTGTTTAAGCTAC 58.362 43.478 0.00 0.00 34.80 3.58
1492 1525 4.347000 TCTGGTGTTCCTGTTTAAGCTACT 59.653 41.667 0.00 0.00 34.80 2.57
1493 1526 5.043737 TGGTGTTCCTGTTTAAGCTACTT 57.956 39.130 0.00 0.00 34.23 2.24
1494 1527 4.819630 TGGTGTTCCTGTTTAAGCTACTTG 59.180 41.667 0.00 0.00 34.23 3.16
1495 1528 4.320275 GGTGTTCCTGTTTAAGCTACTTGC 60.320 45.833 0.00 0.00 43.29 4.01
1514 1547 4.322080 TGCGCTGATATACTTTGTAGCT 57.678 40.909 9.73 0.00 0.00 3.32
1515 1548 4.299155 TGCGCTGATATACTTTGTAGCTC 58.701 43.478 9.73 0.00 0.00 4.09
1522 1555 7.436430 TGATATACTTTGTAGCTCTAGACCG 57.564 40.000 0.00 0.00 0.00 4.79
1525 1558 4.175787 ACTTTGTAGCTCTAGACCGTTG 57.824 45.455 0.00 0.00 0.00 4.10
1540 1573 1.021390 CGTTGGATCAGTGCACCCTC 61.021 60.000 14.63 7.78 0.00 4.30
1541 1574 1.021390 GTTGGATCAGTGCACCCTCG 61.021 60.000 14.63 0.00 0.00 4.63
1542 1575 1.191489 TTGGATCAGTGCACCCTCGA 61.191 55.000 14.63 5.75 0.00 4.04
1543 1576 0.977627 TGGATCAGTGCACCCTCGAT 60.978 55.000 14.63 10.66 0.00 3.59
1544 1577 0.249657 GGATCAGTGCACCCTCGATC 60.250 60.000 14.63 18.12 33.30 3.69
1559 1592 3.181507 CCTCGATCGATGCACAAAACAAT 60.182 43.478 19.78 0.00 0.00 2.71
1568 1601 5.747675 CGATGCACAAAACAATTGGCATATA 59.252 36.000 14.86 0.00 41.58 0.86
1569 1602 6.291743 CGATGCACAAAACAATTGGCATATAC 60.292 38.462 14.86 5.39 41.58 1.47
1570 1603 4.861462 TGCACAAAACAATTGGCATATACG 59.139 37.500 10.83 0.00 0.00 3.06
1571 1604 4.259770 GCACAAAACAATTGGCATATACGC 60.260 41.667 10.83 0.00 0.00 4.42
1586 1619 2.045340 CGCCCTCCGTCCCAAAAT 60.045 61.111 0.00 0.00 0.00 1.82
1587 1620 1.222387 CGCCCTCCGTCCCAAAATA 59.778 57.895 0.00 0.00 0.00 1.40
1588 1621 0.393267 CGCCCTCCGTCCCAAAATAA 60.393 55.000 0.00 0.00 0.00 1.40
1589 1622 1.389555 GCCCTCCGTCCCAAAATAAG 58.610 55.000 0.00 0.00 0.00 1.73
1590 1623 1.340697 GCCCTCCGTCCCAAAATAAGT 60.341 52.381 0.00 0.00 0.00 2.24
1591 1624 2.882643 GCCCTCCGTCCCAAAATAAGTT 60.883 50.000 0.00 0.00 0.00 2.66
1592 1625 2.752903 CCCTCCGTCCCAAAATAAGTTG 59.247 50.000 0.00 0.00 0.00 3.16
1593 1626 2.163613 CCTCCGTCCCAAAATAAGTTGC 59.836 50.000 0.00 0.00 0.00 4.17
1594 1627 2.817258 CTCCGTCCCAAAATAAGTTGCA 59.183 45.455 0.00 0.00 0.00 4.08
1595 1628 2.554893 TCCGTCCCAAAATAAGTTGCAC 59.445 45.455 0.00 0.00 0.00 4.57
1596 1629 2.556622 CCGTCCCAAAATAAGTTGCACT 59.443 45.455 0.00 0.00 0.00 4.40
1597 1630 3.754323 CCGTCCCAAAATAAGTTGCACTA 59.246 43.478 0.00 0.00 0.00 2.74
1598 1631 4.216687 CCGTCCCAAAATAAGTTGCACTAA 59.783 41.667 0.00 0.00 0.00 2.24
1599 1632 5.278561 CCGTCCCAAAATAAGTTGCACTAAA 60.279 40.000 0.00 0.00 0.00 1.85
1600 1633 6.386654 CGTCCCAAAATAAGTTGCACTAAAT 58.613 36.000 0.00 0.00 0.00 1.40
1601 1634 6.307800 CGTCCCAAAATAAGTTGCACTAAATG 59.692 38.462 0.00 0.00 0.00 2.32
1602 1635 6.589907 GTCCCAAAATAAGTTGCACTAAATGG 59.410 38.462 0.00 0.00 0.00 3.16
1603 1636 5.874261 CCCAAAATAAGTTGCACTAAATGGG 59.126 40.000 0.00 0.00 0.00 4.00
1604 1637 6.295575 CCCAAAATAAGTTGCACTAAATGGGA 60.296 38.462 9.27 0.00 0.00 4.37
1605 1638 6.589907 CCAAAATAAGTTGCACTAAATGGGAC 59.410 38.462 0.00 0.00 0.00 4.46
1620 1653 3.449746 TGGGACACTTATTTTGGGAGG 57.550 47.619 0.00 0.00 0.00 4.30
1621 1654 2.042433 TGGGACACTTATTTTGGGAGGG 59.958 50.000 0.00 0.00 0.00 4.30
1622 1655 2.623239 GGGACACTTATTTTGGGAGGGG 60.623 54.545 0.00 0.00 0.00 4.79
1623 1656 2.623239 GGACACTTATTTTGGGAGGGGG 60.623 54.545 0.00 0.00 0.00 5.40
1624 1657 2.042569 GACACTTATTTTGGGAGGGGGT 59.957 50.000 0.00 0.00 0.00 4.95
1625 1658 3.267551 GACACTTATTTTGGGAGGGGGTA 59.732 47.826 0.00 0.00 0.00 3.69
1626 1659 3.268595 ACACTTATTTTGGGAGGGGGTAG 59.731 47.826 0.00 0.00 0.00 3.18
1627 1660 3.268595 CACTTATTTTGGGAGGGGGTAGT 59.731 47.826 0.00 0.00 0.00 2.73
1628 1661 4.475747 CACTTATTTTGGGAGGGGGTAGTA 59.524 45.833 0.00 0.00 0.00 1.82
1629 1662 5.133830 CACTTATTTTGGGAGGGGGTAGTAT 59.866 44.000 0.00 0.00 0.00 2.12
1630 1663 6.330778 CACTTATTTTGGGAGGGGGTAGTATA 59.669 42.308 0.00 0.00 0.00 1.47
1631 1664 7.018249 CACTTATTTTGGGAGGGGGTAGTATAT 59.982 40.741 0.00 0.00 0.00 0.86
1632 1665 8.250932 ACTTATTTTGGGAGGGGGTAGTATATA 58.749 37.037 0.00 0.00 0.00 0.86
1880 4838 3.963622 GCACTTCGCAGATCTTGTG 57.036 52.632 0.00 0.00 41.79 3.33
1918 4876 8.440059 TCGTCATTTACATTACAACTGAACATC 58.560 33.333 0.00 0.00 0.00 3.06
1941 4900 6.447162 TCAGACTAAGTATTCATGCCATACG 58.553 40.000 8.45 0.00 33.07 3.06
1983 4944 0.179134 GTCCTGCTGCTACTGGTACG 60.179 60.000 0.00 0.00 0.00 3.67
2103 5064 5.180117 CACCGACAAGATCAAAGATGAAAGT 59.820 40.000 0.00 0.00 39.49 2.66
2349 5388 2.446994 TGGTGTTCGGTCCCCTGT 60.447 61.111 0.00 0.00 0.00 4.00
2521 5579 1.144936 CCGGATGAGGGACAAGCTC 59.855 63.158 0.00 0.00 0.00 4.09
2542 5600 2.799502 CACATCGTCGACGTGCGT 60.800 61.111 34.40 25.74 41.80 5.24
2705 5774 0.250081 CGCAGGCCTCTTTATCCTCC 60.250 60.000 0.00 0.00 0.00 4.30
2706 5775 1.135960 GCAGGCCTCTTTATCCTCCT 58.864 55.000 0.00 0.00 0.00 3.69
2740 5811 0.396139 GAATGCTGAAGCCCATCCCA 60.396 55.000 0.00 0.00 41.18 4.37
2741 5812 0.263765 AATGCTGAAGCCCATCCCAT 59.736 50.000 0.00 0.00 41.18 4.00
2742 5813 0.178970 ATGCTGAAGCCCATCCCATC 60.179 55.000 0.00 0.00 41.18 3.51
2749 5820 3.105248 CCCATCCCATCCCCAGCA 61.105 66.667 0.00 0.00 0.00 4.41
2799 5871 1.005097 TGCAGGGAAAGCATCAGTGAT 59.995 47.619 0.00 0.00 37.02 3.06
2814 5886 1.671166 TGATATGGATCACCCGGCG 59.329 57.895 0.00 0.00 37.15 6.46
2902 5974 2.258591 GCGTCGAGTTCTGCCAGA 59.741 61.111 0.00 0.00 0.00 3.86
2929 6001 1.002087 GGTTTCTGGACGATGTGGAGT 59.998 52.381 0.00 0.00 0.00 3.85
2936 6011 4.838152 CGATGTGGAGTGGGCGGG 62.838 72.222 0.00 0.00 0.00 6.13
2983 6058 6.076981 ACAACAAGATTTAGGTTCAGCAAG 57.923 37.500 0.00 0.00 0.00 4.01
2984 6059 5.827797 ACAACAAGATTTAGGTTCAGCAAGA 59.172 36.000 0.00 0.00 0.00 3.02
3029 6110 1.258982 CAATCGTATCTTGCAGTCGGC 59.741 52.381 0.00 0.00 45.13 5.54
3032 6113 0.179137 CGTATCTTGCAGTCGGCTCA 60.179 55.000 0.00 0.00 45.15 4.26
3113 6194 9.315363 AGTAATAAGGTCTCCCTCATTATAGTG 57.685 37.037 0.00 0.00 41.56 2.74
3121 6202 7.829706 GGTCTCCCTCATTATAGTGAAAAGTTT 59.170 37.037 0.00 0.00 0.00 2.66
3145 6226 4.963373 TCCCTGTCGAAATCAAGTGTTTA 58.037 39.130 0.00 0.00 0.00 2.01
3187 6269 5.939883 ACCAAACGACATCCATATCCATATG 59.060 40.000 0.00 0.00 39.80 1.78
3225 6308 5.304686 TCCCAACAACAGCCCTATAATAG 57.695 43.478 0.00 0.00 0.00 1.73
3258 6342 7.287696 TCCTAACTATGCAGAGATCAATGTGTA 59.712 37.037 16.75 0.00 0.00 2.90
3261 6345 7.725818 ACTATGCAGAGATCAATGTGTAATG 57.274 36.000 16.75 0.00 0.00 1.90
3277 6361 6.836953 TGTGTAATGATTGTGTTTGTATCCG 58.163 36.000 0.00 0.00 0.00 4.18
3284 6368 4.418013 TTGTGTTTGTATCCGCTTGATG 57.582 40.909 0.00 0.00 34.76 3.07
3293 6377 4.398988 TGTATCCGCTTGATGCTTCATTTT 59.601 37.500 2.75 0.00 37.04 1.82
3294 6378 5.588246 TGTATCCGCTTGATGCTTCATTTTA 59.412 36.000 2.75 0.00 37.04 1.52
3319 6403 8.776376 AAGCTAATTAAATTCACCATTTGTGG 57.224 30.769 0.00 0.00 45.48 4.17
3321 6405 7.180051 AGCTAATTAAATTCACCATTTGTGGGA 59.820 33.333 0.00 0.00 45.48 4.37
3363 6447 7.780008 AAAAGTTGTTAGTTTGTTATTGGGC 57.220 32.000 0.00 0.00 0.00 5.36
3747 6839 7.346695 CAAATTCGATCAAACATGCAAACTTT 58.653 30.769 0.00 0.00 0.00 2.66
3777 6869 9.199982 CTTAGTTCGGATACAAACTTGAAGTTA 57.800 33.333 11.43 0.00 37.47 2.24
3848 6940 0.793617 TCCTCCTCCTTCACCTCCTT 59.206 55.000 0.00 0.00 0.00 3.36
3866 6958 4.258543 TCCTTATTCATCGTGTTGTTCCC 58.741 43.478 0.00 0.00 0.00 3.97
3867 6959 4.019681 TCCTTATTCATCGTGTTGTTCCCT 60.020 41.667 0.00 0.00 0.00 4.20
3895 6987 1.478510 AGAACTCATACTCCACCTGCG 59.521 52.381 0.00 0.00 0.00 5.18
3897 6989 1.257750 ACTCATACTCCACCTGCGCA 61.258 55.000 10.98 10.98 0.00 6.09
3922 7014 1.717113 GCGTATTTTTCACCGCAAACC 59.283 47.619 0.00 0.00 45.12 3.27
3962 7054 3.247442 CCAATGACTAACGTCGCACTAA 58.753 45.455 0.00 0.00 43.21 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.044946 GGGGTGAGACATGTGCCC 60.045 66.667 1.15 9.39 38.61 5.36
125 126 2.919602 ACACCATACTTCCCCATGAACT 59.080 45.455 0.00 0.00 0.00 3.01
330 331 8.306761 GGAAGAAATGTGGTTGTCTGAATTATT 58.693 33.333 0.00 0.00 0.00 1.40
561 562 3.991773 TCTTTTGTCGGCACAGTATACAC 59.008 43.478 5.50 0.00 32.71 2.90
562 563 4.260139 TCTTTTGTCGGCACAGTATACA 57.740 40.909 5.50 0.00 32.71 2.29
563 564 5.808540 TGTATCTTTTGTCGGCACAGTATAC 59.191 40.000 0.00 0.00 32.71 1.47
564 565 5.968254 TGTATCTTTTGTCGGCACAGTATA 58.032 37.500 0.00 0.00 32.71 1.47
565 566 4.827692 TGTATCTTTTGTCGGCACAGTAT 58.172 39.130 0.00 0.00 32.71 2.12
566 567 4.260139 TGTATCTTTTGTCGGCACAGTA 57.740 40.909 0.00 0.00 32.71 2.74
567 568 3.120321 TGTATCTTTTGTCGGCACAGT 57.880 42.857 0.00 0.00 32.71 3.55
568 569 4.481930 TTTGTATCTTTTGTCGGCACAG 57.518 40.909 0.00 0.00 32.71 3.66
569 570 4.902443 TTTTGTATCTTTTGTCGGCACA 57.098 36.364 0.00 0.00 0.00 4.57
570 571 6.523201 CACTATTTTGTATCTTTTGTCGGCAC 59.477 38.462 0.00 0.00 0.00 5.01
571 572 6.607689 CACTATTTTGTATCTTTTGTCGGCA 58.392 36.000 0.00 0.00 0.00 5.69
572 573 5.511729 GCACTATTTTGTATCTTTTGTCGGC 59.488 40.000 0.00 0.00 0.00 5.54
573 574 6.027749 GGCACTATTTTGTATCTTTTGTCGG 58.972 40.000 0.00 0.00 0.00 4.79
574 575 5.732647 CGGCACTATTTTGTATCTTTTGTCG 59.267 40.000 0.00 0.00 0.00 4.35
575 576 6.027749 CCGGCACTATTTTGTATCTTTTGTC 58.972 40.000 0.00 0.00 0.00 3.18
576 577 5.621329 GCCGGCACTATTTTGTATCTTTTGT 60.621 40.000 24.80 0.00 0.00 2.83
577 578 4.798387 GCCGGCACTATTTTGTATCTTTTG 59.202 41.667 24.80 0.00 0.00 2.44
578 579 4.438200 CGCCGGCACTATTTTGTATCTTTT 60.438 41.667 28.98 0.00 0.00 2.27
579 580 3.064820 CGCCGGCACTATTTTGTATCTTT 59.935 43.478 28.98 0.00 0.00 2.52
580 581 2.612212 CGCCGGCACTATTTTGTATCTT 59.388 45.455 28.98 0.00 0.00 2.40
581 582 2.210116 CGCCGGCACTATTTTGTATCT 58.790 47.619 28.98 0.00 0.00 1.98
582 583 1.333791 GCGCCGGCACTATTTTGTATC 60.334 52.381 28.98 0.00 39.62 2.24
583 584 0.661020 GCGCCGGCACTATTTTGTAT 59.339 50.000 28.98 0.00 39.62 2.29
584 585 1.697772 CGCGCCGGCACTATTTTGTA 61.698 55.000 28.98 0.00 39.92 2.41
585 586 2.874751 GCGCCGGCACTATTTTGT 59.125 55.556 28.98 0.00 39.62 2.83
586 587 2.047151 ATCGCGCCGGCACTATTTTG 62.047 55.000 28.98 8.44 39.92 2.44
587 588 0.531090 TATCGCGCCGGCACTATTTT 60.531 50.000 28.98 6.33 39.92 1.82
588 589 0.531090 TTATCGCGCCGGCACTATTT 60.531 50.000 28.98 8.06 39.92 1.40
589 590 1.068417 TTATCGCGCCGGCACTATT 59.932 52.632 28.98 9.23 39.92 1.73
610 611 0.857935 GCACAGATCGACATGCTAGC 59.142 55.000 8.10 8.10 35.16 3.42
744 745 1.068588 CTGGAACTCACGTGGAACTGA 59.931 52.381 17.00 0.00 31.75 3.41
748 749 1.967779 TGATCTGGAACTCACGTGGAA 59.032 47.619 17.00 0.00 0.00 3.53
827 844 0.829333 AAATTTGCAGGGCACACACA 59.171 45.000 0.00 0.00 38.71 3.72
828 845 1.501169 GAAATTTGCAGGGCACACAC 58.499 50.000 0.00 0.00 38.71 3.82
886 904 2.359531 GGAGTGCTCAACGATAGCTACT 59.640 50.000 0.00 9.92 40.73 2.57
949 975 0.610687 TGACACACACACACCACAGA 59.389 50.000 0.00 0.00 0.00 3.41
967 993 2.740055 GCTCCGCTCCACACACTG 60.740 66.667 0.00 0.00 0.00 3.66
968 994 4.008933 GGCTCCGCTCCACACACT 62.009 66.667 0.00 0.00 0.00 3.55
1017 1046 2.610859 GTCTCCCCCTTGGCTCCA 60.611 66.667 0.00 0.00 0.00 3.86
1023 1052 2.347490 CACACCGTCTCCCCCTTG 59.653 66.667 0.00 0.00 0.00 3.61
1222 1255 1.328430 GGTGGTAGAGGAAGTCGGGG 61.328 65.000 0.00 0.00 0.00 5.73
1230 1263 1.613610 CGGAGGAGGTGGTAGAGGA 59.386 63.158 0.00 0.00 0.00 3.71
1233 1266 2.439701 CGCGGAGGAGGTGGTAGA 60.440 66.667 0.00 0.00 0.00 2.59
1234 1267 4.208686 GCGCGGAGGAGGTGGTAG 62.209 72.222 8.83 0.00 0.00 3.18
1259 1292 4.803426 GTCGGAGCAGGCTCGGTG 62.803 72.222 22.78 12.67 43.59 4.94
1270 1303 2.760385 GAGAGGGTGGGGTCGGAG 60.760 72.222 0.00 0.00 0.00 4.63
1271 1304 4.393778 GGAGAGGGTGGGGTCGGA 62.394 72.222 0.00 0.00 0.00 4.55
1272 1305 4.715130 TGGAGAGGGTGGGGTCGG 62.715 72.222 0.00 0.00 0.00 4.79
1273 1306 2.880629 ATCTGGAGAGGGTGGGGTCG 62.881 65.000 0.00 0.00 0.00 4.79
1274 1307 0.621862 AATCTGGAGAGGGTGGGGTC 60.622 60.000 0.00 0.00 0.00 4.46
1275 1308 0.178831 AAATCTGGAGAGGGTGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
1276 1309 1.002857 AAAATCTGGAGAGGGTGGGG 58.997 55.000 0.00 0.00 0.00 4.96
1277 1310 2.621668 GGAAAAATCTGGAGAGGGTGGG 60.622 54.545 0.00 0.00 0.00 4.61
1278 1311 2.310052 AGGAAAAATCTGGAGAGGGTGG 59.690 50.000 0.00 0.00 0.00 4.61
1279 1312 3.728385 AGGAAAAATCTGGAGAGGGTG 57.272 47.619 0.00 0.00 0.00 4.61
1280 1313 3.919554 AGAAGGAAAAATCTGGAGAGGGT 59.080 43.478 0.00 0.00 0.00 4.34
1281 1314 4.582973 AGAAGGAAAAATCTGGAGAGGG 57.417 45.455 0.00 0.00 0.00 4.30
1282 1315 6.006449 TCAAAGAAGGAAAAATCTGGAGAGG 58.994 40.000 0.00 0.00 0.00 3.69
1283 1316 7.516198 TTCAAAGAAGGAAAAATCTGGAGAG 57.484 36.000 0.00 0.00 0.00 3.20
1284 1317 7.039504 CCATTCAAAGAAGGAAAAATCTGGAGA 60.040 37.037 0.00 0.00 0.00 3.71
1285 1318 7.095270 CCATTCAAAGAAGGAAAAATCTGGAG 58.905 38.462 0.00 0.00 0.00 3.86
1286 1319 6.014327 CCCATTCAAAGAAGGAAAAATCTGGA 60.014 38.462 0.00 0.00 0.00 3.86
1287 1320 6.014327 TCCCATTCAAAGAAGGAAAAATCTGG 60.014 38.462 0.00 0.00 0.00 3.86
1288 1321 6.870439 GTCCCATTCAAAGAAGGAAAAATCTG 59.130 38.462 0.00 0.00 0.00 2.90
1289 1322 6.554605 TGTCCCATTCAAAGAAGGAAAAATCT 59.445 34.615 0.00 0.00 0.00 2.40
1290 1323 6.646653 GTGTCCCATTCAAAGAAGGAAAAATC 59.353 38.462 0.00 0.00 0.00 2.17
1291 1324 6.099557 TGTGTCCCATTCAAAGAAGGAAAAAT 59.900 34.615 0.00 0.00 0.00 1.82
1292 1325 5.423610 TGTGTCCCATTCAAAGAAGGAAAAA 59.576 36.000 0.00 0.00 0.00 1.94
1293 1326 4.959210 TGTGTCCCATTCAAAGAAGGAAAA 59.041 37.500 0.00 0.00 0.00 2.29
1294 1327 4.541705 TGTGTCCCATTCAAAGAAGGAAA 58.458 39.130 0.00 0.00 0.00 3.13
1295 1328 4.177537 TGTGTCCCATTCAAAGAAGGAA 57.822 40.909 0.00 0.00 0.00 3.36
1296 1329 3.874383 TGTGTCCCATTCAAAGAAGGA 57.126 42.857 0.00 0.00 0.00 3.36
1297 1330 3.891366 ACTTGTGTCCCATTCAAAGAAGG 59.109 43.478 0.00 0.00 0.00 3.46
1298 1331 4.319766 CGACTTGTGTCCCATTCAAAGAAG 60.320 45.833 0.00 0.00 39.94 2.85
1299 1332 3.563808 CGACTTGTGTCCCATTCAAAGAA 59.436 43.478 0.00 0.00 39.94 2.52
1300 1333 3.138304 CGACTTGTGTCCCATTCAAAGA 58.862 45.455 0.00 0.00 39.94 2.52
1301 1334 2.226437 CCGACTTGTGTCCCATTCAAAG 59.774 50.000 0.00 0.00 39.94 2.77
1302 1335 2.226330 CCGACTTGTGTCCCATTCAAA 58.774 47.619 0.00 0.00 39.94 2.69
1303 1336 1.142060 ACCGACTTGTGTCCCATTCAA 59.858 47.619 0.00 0.00 39.94 2.69
1304 1337 0.762418 ACCGACTTGTGTCCCATTCA 59.238 50.000 0.00 0.00 39.94 2.57
1305 1338 1.892209 AACCGACTTGTGTCCCATTC 58.108 50.000 0.00 0.00 39.94 2.67
1306 1339 2.105134 TGTAACCGACTTGTGTCCCATT 59.895 45.455 0.00 0.00 39.94 3.16
1307 1340 1.695242 TGTAACCGACTTGTGTCCCAT 59.305 47.619 0.00 0.00 39.94 4.00
1308 1341 1.121378 TGTAACCGACTTGTGTCCCA 58.879 50.000 0.00 0.00 39.94 4.37
1309 1342 2.344025 GATGTAACCGACTTGTGTCCC 58.656 52.381 0.00 0.00 39.94 4.46
1310 1343 1.990563 CGATGTAACCGACTTGTGTCC 59.009 52.381 0.00 0.00 39.94 4.02
1311 1344 1.990563 CCGATGTAACCGACTTGTGTC 59.009 52.381 0.00 0.00 39.70 3.67
1312 1345 1.342174 ACCGATGTAACCGACTTGTGT 59.658 47.619 0.00 0.00 0.00 3.72
1313 1346 1.990563 GACCGATGTAACCGACTTGTG 59.009 52.381 0.00 0.00 0.00 3.33
1314 1347 1.614903 TGACCGATGTAACCGACTTGT 59.385 47.619 0.00 0.00 0.00 3.16
1315 1348 2.357327 TGACCGATGTAACCGACTTG 57.643 50.000 0.00 0.00 0.00 3.16
1316 1349 2.353406 CCTTGACCGATGTAACCGACTT 60.353 50.000 0.00 0.00 0.00 3.01
1317 1350 1.203994 CCTTGACCGATGTAACCGACT 59.796 52.381 0.00 0.00 0.00 4.18
1318 1351 1.067354 ACCTTGACCGATGTAACCGAC 60.067 52.381 0.00 0.00 0.00 4.79
1319 1352 1.067425 CACCTTGACCGATGTAACCGA 60.067 52.381 0.00 0.00 0.00 4.69
1320 1353 1.337447 ACACCTTGACCGATGTAACCG 60.337 52.381 0.00 0.00 0.00 4.44
1321 1354 2.289195 TGACACCTTGACCGATGTAACC 60.289 50.000 0.00 0.00 0.00 2.85
1322 1355 3.034721 TGACACCTTGACCGATGTAAC 57.965 47.619 0.00 0.00 0.00 2.50
1323 1356 3.513912 AGATGACACCTTGACCGATGTAA 59.486 43.478 0.00 0.00 0.00 2.41
1324 1357 3.096852 AGATGACACCTTGACCGATGTA 58.903 45.455 0.00 0.00 0.00 2.29
1325 1358 1.902508 AGATGACACCTTGACCGATGT 59.097 47.619 0.00 0.00 0.00 3.06
1326 1359 2.680312 AGATGACACCTTGACCGATG 57.320 50.000 0.00 0.00 0.00 3.84
1327 1360 3.096852 TGTAGATGACACCTTGACCGAT 58.903 45.455 0.00 0.00 31.20 4.18
1328 1361 2.521126 TGTAGATGACACCTTGACCGA 58.479 47.619 0.00 0.00 31.20 4.69
1329 1362 3.526931 ATGTAGATGACACCTTGACCG 57.473 47.619 0.00 0.00 42.17 4.79
1330 1363 4.141937 TGCTATGTAGATGACACCTTGACC 60.142 45.833 0.00 0.00 42.17 4.02
1331 1364 5.011090 TGCTATGTAGATGACACCTTGAC 57.989 43.478 0.00 0.00 42.17 3.18
1332 1365 5.363580 TCATGCTATGTAGATGACACCTTGA 59.636 40.000 0.00 0.00 42.17 3.02
1333 1366 5.604565 TCATGCTATGTAGATGACACCTTG 58.395 41.667 0.00 0.00 42.17 3.61
1334 1367 5.876651 TCATGCTATGTAGATGACACCTT 57.123 39.130 0.00 0.00 42.17 3.50
1335 1368 5.541484 TGATCATGCTATGTAGATGACACCT 59.459 40.000 0.00 0.00 42.17 4.00
1336 1369 5.636965 GTGATCATGCTATGTAGATGACACC 59.363 44.000 0.00 0.00 42.17 4.16
1337 1370 5.636965 GGTGATCATGCTATGTAGATGACAC 59.363 44.000 0.00 0.00 42.17 3.67
1338 1371 5.565439 CGGTGATCATGCTATGTAGATGACA 60.565 44.000 0.00 0.00 43.97 3.58
1339 1372 4.861462 CGGTGATCATGCTATGTAGATGAC 59.139 45.833 0.00 0.00 0.00 3.06
1340 1373 4.524328 ACGGTGATCATGCTATGTAGATGA 59.476 41.667 0.00 0.00 0.00 2.92
1341 1374 4.624452 CACGGTGATCATGCTATGTAGATG 59.376 45.833 0.74 0.00 0.00 2.90
1342 1375 4.322273 CCACGGTGATCATGCTATGTAGAT 60.322 45.833 10.28 0.00 0.00 1.98
1343 1376 3.005791 CCACGGTGATCATGCTATGTAGA 59.994 47.826 10.28 0.00 0.00 2.59
1344 1377 3.005791 TCCACGGTGATCATGCTATGTAG 59.994 47.826 10.28 0.00 0.00 2.74
1345 1378 2.962421 TCCACGGTGATCATGCTATGTA 59.038 45.455 10.28 0.00 0.00 2.29
1346 1379 1.762370 TCCACGGTGATCATGCTATGT 59.238 47.619 10.28 0.00 0.00 2.29
1347 1380 2.531522 TCCACGGTGATCATGCTATG 57.468 50.000 10.28 0.00 0.00 2.23
1348 1381 2.027745 GGATCCACGGTGATCATGCTAT 60.028 50.000 10.28 0.00 42.41 2.97
1349 1382 1.344438 GGATCCACGGTGATCATGCTA 59.656 52.381 10.28 0.00 42.41 3.49
1350 1383 0.107456 GGATCCACGGTGATCATGCT 59.893 55.000 10.28 0.00 42.41 3.79
1351 1384 0.179048 TGGATCCACGGTGATCATGC 60.179 55.000 11.44 4.67 42.41 4.06
1352 1385 1.413812 TCTGGATCCACGGTGATCATG 59.586 52.381 11.44 0.00 42.41 3.07
1353 1386 1.793414 TCTGGATCCACGGTGATCAT 58.207 50.000 11.44 0.00 42.41 2.45
1354 1387 1.793414 ATCTGGATCCACGGTGATCA 58.207 50.000 11.44 0.00 42.41 2.92
1355 1388 2.548920 GGAATCTGGATCCACGGTGATC 60.549 54.545 11.44 10.29 40.37 2.92
1356 1389 1.417890 GGAATCTGGATCCACGGTGAT 59.582 52.381 11.44 9.43 36.92 3.06
1357 1390 0.830648 GGAATCTGGATCCACGGTGA 59.169 55.000 11.44 7.16 36.92 4.02
1358 1391 0.530650 CGGAATCTGGATCCACGGTG 60.531 60.000 11.44 0.56 36.74 4.94
1359 1392 1.686325 CCGGAATCTGGATCCACGGT 61.686 60.000 25.27 10.90 36.74 4.83
1360 1393 1.069765 CCGGAATCTGGATCCACGG 59.930 63.158 22.02 22.02 36.74 4.94
1361 1394 0.178068 AACCGGAATCTGGATCCACG 59.822 55.000 16.23 12.57 36.74 4.94
1362 1395 1.475213 GGAACCGGAATCTGGATCCAC 60.475 57.143 26.74 0.07 45.27 4.02
1363 1396 0.837272 GGAACCGGAATCTGGATCCA 59.163 55.000 26.74 15.27 45.27 3.41
1364 1397 0.108774 GGGAACCGGAATCTGGATCC 59.891 60.000 24.55 24.55 45.22 3.36
1365 1398 3.708013 GGGAACCGGAATCTGGATC 57.292 57.895 16.23 12.62 40.86 3.36
1378 1411 0.392595 ATCGAGCTTTTCCGGGGAAC 60.393 55.000 0.00 0.00 33.41 3.62
1379 1412 0.107848 GATCGAGCTTTTCCGGGGAA 60.108 55.000 0.00 0.00 0.00 3.97
1380 1413 0.976073 AGATCGAGCTTTTCCGGGGA 60.976 55.000 0.00 0.00 0.00 4.81
1381 1414 0.107654 AAGATCGAGCTTTTCCGGGG 60.108 55.000 10.76 0.00 0.00 5.73
1382 1415 1.134670 AGAAGATCGAGCTTTTCCGGG 60.135 52.381 18.25 0.00 0.00 5.73
1383 1416 2.301577 AGAAGATCGAGCTTTTCCGG 57.698 50.000 18.25 0.00 0.00 5.14
1384 1417 3.794028 CAGTAGAAGATCGAGCTTTTCCG 59.206 47.826 18.25 2.13 0.00 4.30
1385 1418 4.749976 ACAGTAGAAGATCGAGCTTTTCC 58.250 43.478 18.25 2.57 0.00 3.13
1386 1419 5.635700 ACAACAGTAGAAGATCGAGCTTTTC 59.364 40.000 18.25 5.77 0.00 2.29
1387 1420 5.542779 ACAACAGTAGAAGATCGAGCTTTT 58.457 37.500 18.25 14.62 0.00 2.27
1388 1421 5.140747 ACAACAGTAGAAGATCGAGCTTT 57.859 39.130 18.25 9.96 0.00 3.51
1389 1422 4.792521 ACAACAGTAGAAGATCGAGCTT 57.207 40.909 17.16 17.16 0.00 3.74
1390 1423 4.792521 AACAACAGTAGAAGATCGAGCT 57.207 40.909 0.00 0.00 0.00 4.09
1391 1424 5.642686 ACTAACAACAGTAGAAGATCGAGC 58.357 41.667 0.00 0.00 0.00 5.03
1392 1425 7.085116 ACAACTAACAACAGTAGAAGATCGAG 58.915 38.462 0.00 0.00 0.00 4.04
1393 1426 6.978338 ACAACTAACAACAGTAGAAGATCGA 58.022 36.000 0.00 0.00 0.00 3.59
1394 1427 7.639162 AACAACTAACAACAGTAGAAGATCG 57.361 36.000 0.00 0.00 0.00 3.69
1395 1428 8.923683 GGTAACAACTAACAACAGTAGAAGATC 58.076 37.037 0.00 0.00 0.00 2.75
1396 1429 8.648693 AGGTAACAACTAACAACAGTAGAAGAT 58.351 33.333 0.00 0.00 41.41 2.40
1397 1430 7.924412 CAGGTAACAACTAACAACAGTAGAAGA 59.076 37.037 0.00 0.00 41.41 2.87
1398 1431 7.709613 ACAGGTAACAACTAACAACAGTAGAAG 59.290 37.037 0.00 0.00 41.41 2.85
1399 1432 7.558604 ACAGGTAACAACTAACAACAGTAGAA 58.441 34.615 0.00 0.00 41.41 2.10
1400 1433 7.116075 ACAGGTAACAACTAACAACAGTAGA 57.884 36.000 0.00 0.00 41.41 2.59
1401 1434 7.709613 AGAACAGGTAACAACTAACAACAGTAG 59.290 37.037 0.00 0.00 41.41 2.57
1402 1435 7.558604 AGAACAGGTAACAACTAACAACAGTA 58.441 34.615 0.00 0.00 41.41 2.74
1403 1436 6.412214 AGAACAGGTAACAACTAACAACAGT 58.588 36.000 0.00 0.00 41.41 3.55
1404 1437 6.761714 AGAGAACAGGTAACAACTAACAACAG 59.238 38.462 0.00 0.00 41.41 3.16
1405 1438 6.537301 CAGAGAACAGGTAACAACTAACAACA 59.463 38.462 0.00 0.00 41.41 3.33
1406 1439 6.018180 CCAGAGAACAGGTAACAACTAACAAC 60.018 42.308 0.00 0.00 41.41 3.32
1407 1440 6.053005 CCAGAGAACAGGTAACAACTAACAA 58.947 40.000 0.00 0.00 41.41 2.83
1408 1441 5.454187 CCCAGAGAACAGGTAACAACTAACA 60.454 44.000 0.00 0.00 41.41 2.41
1409 1442 4.995487 CCCAGAGAACAGGTAACAACTAAC 59.005 45.833 0.00 0.00 41.41 2.34
1410 1443 4.041198 CCCCAGAGAACAGGTAACAACTAA 59.959 45.833 0.00 0.00 41.41 2.24
1411 1444 3.581332 CCCCAGAGAACAGGTAACAACTA 59.419 47.826 0.00 0.00 41.41 2.24
1412 1445 2.372172 CCCCAGAGAACAGGTAACAACT 59.628 50.000 0.00 0.00 41.41 3.16
1413 1446 2.105993 ACCCCAGAGAACAGGTAACAAC 59.894 50.000 0.00 0.00 41.41 3.32
1414 1447 2.414612 ACCCCAGAGAACAGGTAACAA 58.585 47.619 0.00 0.00 41.41 2.83
1415 1448 2.112279 ACCCCAGAGAACAGGTAACA 57.888 50.000 0.00 0.00 41.41 2.41
1416 1449 4.470304 AGATAACCCCAGAGAACAGGTAAC 59.530 45.833 0.00 0.00 30.63 2.50
1417 1450 4.469945 CAGATAACCCCAGAGAACAGGTAA 59.530 45.833 0.00 0.00 30.63 2.85
1418 1451 4.030913 CAGATAACCCCAGAGAACAGGTA 58.969 47.826 0.00 0.00 30.63 3.08
1419 1452 2.840651 CAGATAACCCCAGAGAACAGGT 59.159 50.000 0.00 0.00 0.00 4.00
1420 1453 2.171448 CCAGATAACCCCAGAGAACAGG 59.829 54.545 0.00 0.00 0.00 4.00
1421 1454 3.107601 TCCAGATAACCCCAGAGAACAG 58.892 50.000 0.00 0.00 0.00 3.16
1422 1455 2.838202 GTCCAGATAACCCCAGAGAACA 59.162 50.000 0.00 0.00 0.00 3.18
1423 1456 2.159085 CGTCCAGATAACCCCAGAGAAC 60.159 54.545 0.00 0.00 0.00 3.01
1424 1457 2.108168 CGTCCAGATAACCCCAGAGAA 58.892 52.381 0.00 0.00 0.00 2.87
1425 1458 1.006758 ACGTCCAGATAACCCCAGAGA 59.993 52.381 0.00 0.00 0.00 3.10
1426 1459 1.409427 GACGTCCAGATAACCCCAGAG 59.591 57.143 3.51 0.00 0.00 3.35
1427 1460 1.006758 AGACGTCCAGATAACCCCAGA 59.993 52.381 13.01 0.00 0.00 3.86
1428 1461 1.137086 CAGACGTCCAGATAACCCCAG 59.863 57.143 13.01 0.00 0.00 4.45
1429 1462 1.191535 CAGACGTCCAGATAACCCCA 58.808 55.000 13.01 0.00 0.00 4.96
1430 1463 0.464452 CCAGACGTCCAGATAACCCC 59.536 60.000 13.01 0.00 0.00 4.95
1431 1464 0.179081 GCCAGACGTCCAGATAACCC 60.179 60.000 13.01 0.00 0.00 4.11
1432 1465 0.824759 AGCCAGACGTCCAGATAACC 59.175 55.000 13.01 0.00 0.00 2.85
1433 1466 1.476891 TCAGCCAGACGTCCAGATAAC 59.523 52.381 13.01 0.00 0.00 1.89
1434 1467 1.847328 TCAGCCAGACGTCCAGATAA 58.153 50.000 13.01 0.00 0.00 1.75
1435 1468 1.683385 CATCAGCCAGACGTCCAGATA 59.317 52.381 13.01 0.00 0.00 1.98
1436 1469 0.463204 CATCAGCCAGACGTCCAGAT 59.537 55.000 13.01 6.00 0.00 2.90
1437 1470 0.611896 TCATCAGCCAGACGTCCAGA 60.612 55.000 13.01 3.72 0.00 3.86
1438 1471 0.247460 TTCATCAGCCAGACGTCCAG 59.753 55.000 13.01 4.86 0.00 3.86
1439 1472 0.247460 CTTCATCAGCCAGACGTCCA 59.753 55.000 13.01 0.00 0.00 4.02
1440 1473 0.247736 ACTTCATCAGCCAGACGTCC 59.752 55.000 13.01 0.00 0.00 4.79
1441 1474 2.803451 CTACTTCATCAGCCAGACGTC 58.197 52.381 7.70 7.70 0.00 4.34
1442 1475 1.134965 GCTACTTCATCAGCCAGACGT 60.135 52.381 0.00 0.00 0.00 4.34
1443 1476 1.565305 GCTACTTCATCAGCCAGACG 58.435 55.000 0.00 0.00 0.00 4.18
1444 1477 1.134965 ACGCTACTTCATCAGCCAGAC 60.135 52.381 0.00 0.00 34.15 3.51
1445 1478 1.134995 CACGCTACTTCATCAGCCAGA 60.135 52.381 0.00 0.00 34.15 3.86
1446 1479 1.284657 CACGCTACTTCATCAGCCAG 58.715 55.000 0.00 0.00 34.15 4.85
1447 1480 0.108186 CCACGCTACTTCATCAGCCA 60.108 55.000 0.00 0.00 34.15 4.75
1448 1481 0.811616 CCCACGCTACTTCATCAGCC 60.812 60.000 0.00 0.00 34.15 4.85
1449 1482 0.175760 TCCCACGCTACTTCATCAGC 59.824 55.000 0.00 0.00 0.00 4.26
1450 1483 2.363680 AGATCCCACGCTACTTCATCAG 59.636 50.000 0.00 0.00 0.00 2.90
1451 1484 2.101415 CAGATCCCACGCTACTTCATCA 59.899 50.000 0.00 0.00 0.00 3.07
1452 1485 2.546795 CCAGATCCCACGCTACTTCATC 60.547 54.545 0.00 0.00 0.00 2.92
1453 1486 1.414181 CCAGATCCCACGCTACTTCAT 59.586 52.381 0.00 0.00 0.00 2.57
1454 1487 0.824109 CCAGATCCCACGCTACTTCA 59.176 55.000 0.00 0.00 0.00 3.02
1455 1488 0.824759 ACCAGATCCCACGCTACTTC 59.175 55.000 0.00 0.00 0.00 3.01
1456 1489 0.537188 CACCAGATCCCACGCTACTT 59.463 55.000 0.00 0.00 0.00 2.24
1457 1490 0.614979 ACACCAGATCCCACGCTACT 60.615 55.000 0.00 0.00 0.00 2.57
1458 1491 0.249398 AACACCAGATCCCACGCTAC 59.751 55.000 0.00 0.00 0.00 3.58
1459 1492 0.535335 GAACACCAGATCCCACGCTA 59.465 55.000 0.00 0.00 0.00 4.26
1460 1493 1.296715 GAACACCAGATCCCACGCT 59.703 57.895 0.00 0.00 0.00 5.07
1461 1494 1.745489 GGAACACCAGATCCCACGC 60.745 63.158 0.00 0.00 30.86 5.34
1462 1495 0.391661 CAGGAACACCAGATCCCACG 60.392 60.000 0.00 0.00 37.41 4.94
1463 1496 0.693049 ACAGGAACACCAGATCCCAC 59.307 55.000 0.00 0.00 37.41 4.61
1464 1497 1.444933 AACAGGAACACCAGATCCCA 58.555 50.000 0.00 0.00 37.41 4.37
1465 1498 2.586648 AAACAGGAACACCAGATCCC 57.413 50.000 0.00 0.00 37.41 3.85
1466 1499 3.440522 GCTTAAACAGGAACACCAGATCC 59.559 47.826 0.00 0.00 36.99 3.36
1467 1500 4.327680 AGCTTAAACAGGAACACCAGATC 58.672 43.478 0.00 0.00 0.00 2.75
1468 1501 4.373156 AGCTTAAACAGGAACACCAGAT 57.627 40.909 0.00 0.00 0.00 2.90
1469 1502 3.857157 AGCTTAAACAGGAACACCAGA 57.143 42.857 0.00 0.00 0.00 3.86
1470 1503 4.642429 AGTAGCTTAAACAGGAACACCAG 58.358 43.478 0.00 0.00 0.00 4.00
1471 1504 4.699925 AGTAGCTTAAACAGGAACACCA 57.300 40.909 0.00 0.00 0.00 4.17
1472 1505 4.320275 GCAAGTAGCTTAAACAGGAACACC 60.320 45.833 0.00 0.00 41.15 4.16
1473 1506 4.610680 CGCAAGTAGCTTAAACAGGAACAC 60.611 45.833 0.00 0.00 42.61 3.32
1474 1507 3.496884 CGCAAGTAGCTTAAACAGGAACA 59.503 43.478 0.00 0.00 42.61 3.18
1475 1508 3.667166 GCGCAAGTAGCTTAAACAGGAAC 60.667 47.826 0.30 0.00 42.61 3.62
1476 1509 2.482721 GCGCAAGTAGCTTAAACAGGAA 59.517 45.455 0.30 0.00 42.61 3.36
1477 1510 2.073816 GCGCAAGTAGCTTAAACAGGA 58.926 47.619 0.30 0.00 42.61 3.86
1478 1511 2.076863 AGCGCAAGTAGCTTAAACAGG 58.923 47.619 11.47 0.00 43.24 4.00
1479 1512 2.736721 TCAGCGCAAGTAGCTTAAACAG 59.263 45.455 11.47 0.00 44.06 3.16
1480 1513 2.761559 TCAGCGCAAGTAGCTTAAACA 58.238 42.857 11.47 0.00 44.06 2.83
1481 1514 5.659048 ATATCAGCGCAAGTAGCTTAAAC 57.341 39.130 11.47 0.00 44.06 2.01
1482 1515 6.513180 AGTATATCAGCGCAAGTAGCTTAAA 58.487 36.000 11.47 0.00 44.06 1.52
1483 1516 6.085555 AGTATATCAGCGCAAGTAGCTTAA 57.914 37.500 11.47 0.00 44.06 1.85
1484 1517 5.707242 AGTATATCAGCGCAAGTAGCTTA 57.293 39.130 11.47 0.00 44.06 3.09
1485 1518 4.592485 AGTATATCAGCGCAAGTAGCTT 57.408 40.909 11.47 0.00 44.06 3.74
1487 1520 4.508124 ACAAAGTATATCAGCGCAAGTAGC 59.492 41.667 11.47 0.00 41.68 3.58
1488 1521 6.129062 GCTACAAAGTATATCAGCGCAAGTAG 60.129 42.308 11.47 4.00 41.68 2.57
1489 1522 5.690409 GCTACAAAGTATATCAGCGCAAGTA 59.310 40.000 11.47 0.00 41.68 2.24
1490 1523 4.508124 GCTACAAAGTATATCAGCGCAAGT 59.492 41.667 11.47 0.00 41.68 3.16
1491 1524 4.747108 AGCTACAAAGTATATCAGCGCAAG 59.253 41.667 11.47 0.72 34.26 4.01
1492 1525 4.693283 AGCTACAAAGTATATCAGCGCAA 58.307 39.130 11.47 0.00 34.26 4.85
1493 1526 4.038042 AGAGCTACAAAGTATATCAGCGCA 59.962 41.667 11.47 0.00 34.26 6.09
1494 1527 4.551388 AGAGCTACAAAGTATATCAGCGC 58.449 43.478 0.00 0.00 34.26 5.92
1495 1528 7.018826 GTCTAGAGCTACAAAGTATATCAGCG 58.981 42.308 0.00 0.00 34.26 5.18
1496 1529 7.309920 GGTCTAGAGCTACAAAGTATATCAGC 58.690 42.308 14.73 0.00 0.00 4.26
1497 1530 7.173562 ACGGTCTAGAGCTACAAAGTATATCAG 59.826 40.741 19.17 1.23 0.00 2.90
1498 1531 6.996879 ACGGTCTAGAGCTACAAAGTATATCA 59.003 38.462 19.17 0.00 0.00 2.15
1499 1532 7.437793 ACGGTCTAGAGCTACAAAGTATATC 57.562 40.000 19.17 0.00 0.00 1.63
1500 1533 7.255520 CCAACGGTCTAGAGCTACAAAGTATAT 60.256 40.741 19.17 0.00 0.00 0.86
1501 1534 6.039047 CCAACGGTCTAGAGCTACAAAGTATA 59.961 42.308 19.17 0.00 0.00 1.47
1502 1535 5.163540 CCAACGGTCTAGAGCTACAAAGTAT 60.164 44.000 19.17 0.00 0.00 2.12
1503 1536 4.157289 CCAACGGTCTAGAGCTACAAAGTA 59.843 45.833 19.17 0.00 0.00 2.24
1504 1537 3.056749 CCAACGGTCTAGAGCTACAAAGT 60.057 47.826 19.17 6.26 0.00 2.66
1505 1538 3.192844 TCCAACGGTCTAGAGCTACAAAG 59.807 47.826 19.17 5.64 0.00 2.77
1506 1539 3.159472 TCCAACGGTCTAGAGCTACAAA 58.841 45.455 19.17 0.34 0.00 2.83
1514 1547 1.476891 GCACTGATCCAACGGTCTAGA 59.523 52.381 0.00 0.00 0.00 2.43
1515 1548 1.204704 TGCACTGATCCAACGGTCTAG 59.795 52.381 0.00 0.00 0.00 2.43
1522 1555 1.021390 CGAGGGTGCACTGATCCAAC 61.021 60.000 17.98 6.86 0.00 3.77
1525 1558 0.249657 GATCGAGGGTGCACTGATCC 60.250 60.000 17.98 9.38 31.46 3.36
1540 1573 3.301379 CCAATTGTTTTGTGCATCGATCG 59.699 43.478 9.36 9.36 0.00 3.69
1541 1574 3.061161 GCCAATTGTTTTGTGCATCGATC 59.939 43.478 4.43 0.00 0.00 3.69
1542 1575 2.995258 GCCAATTGTTTTGTGCATCGAT 59.005 40.909 4.43 0.00 0.00 3.59
1543 1576 2.223900 TGCCAATTGTTTTGTGCATCGA 60.224 40.909 4.43 0.00 0.00 3.59
1544 1577 2.133553 TGCCAATTGTTTTGTGCATCG 58.866 42.857 4.43 0.00 0.00 3.84
1568 1601 1.555477 TATTTTGGGACGGAGGGCGT 61.555 55.000 0.00 0.00 0.00 5.68
1569 1602 0.393267 TTATTTTGGGACGGAGGGCG 60.393 55.000 0.00 0.00 0.00 6.13
1570 1603 1.340697 ACTTATTTTGGGACGGAGGGC 60.341 52.381 0.00 0.00 0.00 5.19
1571 1604 2.752903 CAACTTATTTTGGGACGGAGGG 59.247 50.000 0.00 0.00 0.00 4.30
1572 1605 2.163613 GCAACTTATTTTGGGACGGAGG 59.836 50.000 0.00 0.00 0.00 4.30
1573 1606 2.817258 TGCAACTTATTTTGGGACGGAG 59.183 45.455 0.00 0.00 0.00 4.63
1574 1607 2.554893 GTGCAACTTATTTTGGGACGGA 59.445 45.455 0.00 0.00 0.00 4.69
1575 1608 2.941428 GTGCAACTTATTTTGGGACGG 58.059 47.619 0.00 0.00 0.00 4.79
1589 1622 5.897377 ATAAGTGTCCCATTTAGTGCAAC 57.103 39.130 0.00 0.00 0.00 4.17
1590 1623 6.909550 AAATAAGTGTCCCATTTAGTGCAA 57.090 33.333 0.00 0.00 0.00 4.08
1591 1624 6.295011 CCAAAATAAGTGTCCCATTTAGTGCA 60.295 38.462 0.00 0.00 0.00 4.57
1592 1625 6.099341 CCAAAATAAGTGTCCCATTTAGTGC 58.901 40.000 0.00 0.00 0.00 4.40
1593 1626 6.435904 TCCCAAAATAAGTGTCCCATTTAGTG 59.564 38.462 0.00 0.00 0.00 2.74
1594 1627 6.557568 TCCCAAAATAAGTGTCCCATTTAGT 58.442 36.000 0.00 0.00 0.00 2.24
1595 1628 6.096846 CCTCCCAAAATAAGTGTCCCATTTAG 59.903 42.308 0.00 0.00 0.00 1.85
1596 1629 5.955355 CCTCCCAAAATAAGTGTCCCATTTA 59.045 40.000 0.00 0.00 0.00 1.40
1597 1630 4.777366 CCTCCCAAAATAAGTGTCCCATTT 59.223 41.667 0.00 0.00 0.00 2.32
1598 1631 4.352893 CCTCCCAAAATAAGTGTCCCATT 58.647 43.478 0.00 0.00 0.00 3.16
1599 1632 3.309848 CCCTCCCAAAATAAGTGTCCCAT 60.310 47.826 0.00 0.00 0.00 4.00
1600 1633 2.042433 CCCTCCCAAAATAAGTGTCCCA 59.958 50.000 0.00 0.00 0.00 4.37
1601 1634 2.623239 CCCCTCCCAAAATAAGTGTCCC 60.623 54.545 0.00 0.00 0.00 4.46
1602 1635 2.623239 CCCCCTCCCAAAATAAGTGTCC 60.623 54.545 0.00 0.00 0.00 4.02
1603 1636 2.042569 ACCCCCTCCCAAAATAAGTGTC 59.957 50.000 0.00 0.00 0.00 3.67
1604 1637 2.078611 ACCCCCTCCCAAAATAAGTGT 58.921 47.619 0.00 0.00 0.00 3.55
1605 1638 2.919772 ACCCCCTCCCAAAATAAGTG 57.080 50.000 0.00 0.00 0.00 3.16
1606 1639 3.548967 ACTACCCCCTCCCAAAATAAGT 58.451 45.455 0.00 0.00 0.00 2.24
1607 1640 5.924769 ATACTACCCCCTCCCAAAATAAG 57.075 43.478 0.00 0.00 0.00 1.73
1610 1643 9.829367 AATATATATACTACCCCCTCCCAAAAT 57.171 33.333 0.00 0.00 0.00 1.82
1612 1645 9.962835 CTAATATATATACTACCCCCTCCCAAA 57.037 37.037 0.00 0.00 0.00 3.28
1613 1646 9.099823 ACTAATATATATACTACCCCCTCCCAA 57.900 37.037 0.00 0.00 0.00 4.12
1614 1647 8.678621 ACTAATATATATACTACCCCCTCCCA 57.321 38.462 0.00 0.00 0.00 4.37
1895 4853 9.500785 TCTGATGTTCAGTTGTAATGTAAATGA 57.499 29.630 4.56 0.00 44.58 2.57
1896 4854 9.546909 GTCTGATGTTCAGTTGTAATGTAAATG 57.453 33.333 4.56 0.00 44.58 2.32
1897 4855 9.507329 AGTCTGATGTTCAGTTGTAATGTAAAT 57.493 29.630 4.56 0.00 44.58 1.40
1918 4876 6.216569 ACGTATGGCATGAATACTTAGTCTG 58.783 40.000 10.98 3.44 0.00 3.51
1941 4900 4.439563 CCCAAAACTTCAACCTGTGTGTAC 60.440 45.833 0.00 0.00 0.00 2.90
1983 4944 1.474143 GCAGCCTCCAGTACATTCCTC 60.474 57.143 0.00 0.00 0.00 3.71
2103 5064 4.520874 CAGAACTCTCTGTCTGACCAACTA 59.479 45.833 5.17 0.00 43.64 2.24
2164 5181 4.112634 ACAAGATTTGGTGCTTCCCTAA 57.887 40.909 0.00 0.00 34.77 2.69
2349 5388 2.829206 CGTTCACCGTTGGCTGCAA 61.829 57.895 0.50 0.00 0.00 4.08
2521 5579 2.126463 ACGTCGACGATGTGCCAG 60.126 61.111 41.52 12.23 43.02 4.85
2749 5820 4.339247 CCAAAGTGAATGAAGTCAACCAGT 59.661 41.667 0.00 0.00 0.00 4.00
2754 5825 4.998671 TTGCCAAAGTGAATGAAGTCAA 57.001 36.364 0.00 0.00 0.00 3.18
2799 5871 3.936203 GGCGCCGGGTGATCCATA 61.936 66.667 12.58 0.00 34.36 2.74
2814 5886 1.875963 CTTGTCGGTGGTCATTGGC 59.124 57.895 0.00 0.00 0.00 4.52
2817 5889 0.396435 TCAGCTTGTCGGTGGTCATT 59.604 50.000 0.00 0.00 41.41 2.57
2902 5974 2.434774 GTCCAGAAACCCGGCCTT 59.565 61.111 0.00 0.00 0.00 4.35
2936 6011 3.140814 GAGGGAAACGGCATGGCC 61.141 66.667 14.46 0.00 46.75 5.36
2983 6058 2.159170 ACTTGTGCCTAATCTCTCGCTC 60.159 50.000 0.00 0.00 0.00 5.03
2984 6059 1.827969 ACTTGTGCCTAATCTCTCGCT 59.172 47.619 0.00 0.00 0.00 4.93
3029 6110 0.036952 AGACGCTGGATTGGTGTGAG 60.037 55.000 0.00 0.00 0.00 3.51
3032 6113 0.396435 TTGAGACGCTGGATTGGTGT 59.604 50.000 0.00 0.00 0.00 4.16
3113 6194 6.270064 TGATTTCGACAGGGAAAAACTTTTC 58.730 36.000 6.40 6.40 44.38 2.29
3121 6202 3.815809 ACACTTGATTTCGACAGGGAAA 58.184 40.909 0.00 0.00 39.96 3.13
3124 6205 5.631026 CATAAACACTTGATTTCGACAGGG 58.369 41.667 0.00 0.00 0.00 4.45
3187 6269 2.378038 TGGGATGCTCTAAAATGCACC 58.622 47.619 0.00 0.00 42.26 5.01
3225 6308 5.605534 TCTCTGCATAGTTAGGAAATGCTC 58.394 41.667 7.89 0.00 44.96 4.26
3258 6342 5.182950 TCAAGCGGATACAAACACAATCATT 59.817 36.000 0.00 0.00 0.00 2.57
3261 6345 4.678509 TCAAGCGGATACAAACACAATC 57.321 40.909 0.00 0.00 0.00 2.67
3310 6394 6.054941 GCCCTATTATTTTTCCCACAAATGG 58.945 40.000 0.00 0.00 46.81 3.16
3312 6396 6.352651 GGTGCCCTATTATTTTTCCCACAAAT 60.353 38.462 0.00 0.00 0.00 2.32
3319 6403 7.165485 ACTTTTTGGTGCCCTATTATTTTTCC 58.835 34.615 0.00 0.00 0.00 3.13
3321 6405 7.996066 ACAACTTTTTGGTGCCCTATTATTTTT 59.004 29.630 0.00 0.00 36.69 1.94
3343 6427 4.986034 GGTGCCCAATAACAAACTAACAAC 59.014 41.667 0.00 0.00 0.00 3.32
3344 6428 4.649674 TGGTGCCCAATAACAAACTAACAA 59.350 37.500 0.00 0.00 0.00 2.83
3346 6430 4.857509 TGGTGCCCAATAACAAACTAAC 57.142 40.909 0.00 0.00 0.00 2.34
3349 6433 4.762289 TTTTGGTGCCCAATAACAAACT 57.238 36.364 7.39 0.00 43.55 2.66
3722 6814 6.456447 AGTTTGCATGTTTGATCGAATTTG 57.544 33.333 0.00 1.53 0.00 2.32
3723 6815 7.481275 AAAGTTTGCATGTTTGATCGAATTT 57.519 28.000 0.00 0.00 0.00 1.82
3747 6839 9.545105 TTCAAGTTTGTATCCGAACTAAGTTTA 57.455 29.630 0.00 0.00 43.22 2.01
3768 6860 6.401474 CCGACATTGACTGTGATAACTTCAAG 60.401 42.308 4.67 0.00 38.54 3.02
3771 6863 5.168569 TCCGACATTGACTGTGATAACTTC 58.831 41.667 0.00 0.00 38.54 3.01
3777 6869 1.406069 GGCTCCGACATTGACTGTGAT 60.406 52.381 0.00 0.00 38.54 3.06
3804 6896 0.388649 AGCACGTGAATGAGGACGAC 60.389 55.000 22.23 0.00 38.94 4.34
3848 6940 4.545208 TCAGGGAACAACACGATGAATA 57.455 40.909 0.00 0.00 0.00 1.75
3866 6958 3.551863 GGAGTATGAGTTCTCGGCATCAG 60.552 52.174 0.00 0.00 0.00 2.90
3867 6959 2.362397 GGAGTATGAGTTCTCGGCATCA 59.638 50.000 0.00 0.00 0.00 3.07
3895 6987 2.324860 GGTGAAAAATACGCACCTTGC 58.675 47.619 0.00 0.00 46.56 4.01
3920 7012 2.422519 GGATGAGGTTGCATGATGAGGT 60.423 50.000 0.00 0.00 0.00 3.85
3922 7014 2.228059 GGGATGAGGTTGCATGATGAG 58.772 52.381 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.