Multiple sequence alignment - TraesCS5A01G265300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G265300 chr5A 100.000 7325 0 0 1 7325 476998711 477006035 0.000000e+00 13527.0
1 TraesCS5A01G265300 chr5D 98.070 3212 38 5 3233 6443 375989343 375992531 0.000000e+00 5566.0
2 TraesCS5A01G265300 chr5D 97.820 2294 41 6 949 3236 375987008 375989298 0.000000e+00 3951.0
3 TraesCS5A01G265300 chr5D 96.451 648 20 3 6641 7287 375993072 375993717 0.000000e+00 1066.0
4 TraesCS5A01G265300 chr5D 93.243 148 9 1 6499 6646 430152889 430152743 4.450000e-52 217.0
5 TraesCS5A01G265300 chr5D 97.561 41 1 0 7285 7325 375993794 375993834 3.670000e-08 71.3
6 TraesCS5A01G265300 chr5B 97.959 3086 47 9 3368 6450 448888057 448891129 0.000000e+00 5336.0
7 TraesCS5A01G265300 chr5B 97.521 2299 43 8 949 3236 448885128 448887423 0.000000e+00 3917.0
8 TraesCS5A01G265300 chr5B 91.461 527 36 9 6651 7172 448891919 448892441 0.000000e+00 715.0
9 TraesCS5A01G265300 chr5B 99.281 139 1 0 3233 3371 448887468 448887606 1.220000e-62 252.0
10 TraesCS5A01G265300 chr2A 93.343 2088 107 18 4357 6439 718462838 718464898 0.000000e+00 3057.0
11 TraesCS5A01G265300 chr2A 94.659 1554 73 8 1685 3233 718460002 718461550 0.000000e+00 2401.0
12 TraesCS5A01G265300 chr2A 90.385 1144 75 20 3233 4356 718461598 718462726 0.000000e+00 1471.0
13 TraesCS5A01G265300 chr2A 89.822 786 42 15 949 1703 718458602 718459380 0.000000e+00 974.0
14 TraesCS5A01G265300 chr2A 90.953 619 50 3 2174 2786 702075819 702075201 0.000000e+00 828.0
15 TraesCS5A01G265300 chr2A 91.480 223 18 1 1142 1364 17370462 17370241 9.230000e-79 305.0
16 TraesCS5A01G265300 chr2A 91.724 145 12 0 6498 6642 701916 702060 1.250000e-47 202.0
17 TraesCS5A01G265300 chr2A 100.000 55 0 0 6653 6707 718465435 718465489 1.300000e-17 102.0
18 TraesCS5A01G265300 chr2D 92.510 2096 142 12 4357 6443 584273475 584275564 0.000000e+00 2987.0
19 TraesCS5A01G265300 chr2D 90.901 1132 75 17 3233 4356 584272252 584273363 0.000000e+00 1495.0
20 TraesCS5A01G265300 chr2D 94.323 916 43 7 2328 3236 584271294 584272207 0.000000e+00 1395.0
21 TraesCS5A01G265300 chr2D 94.127 647 36 2 1685 2330 584265455 584266100 0.000000e+00 983.0
22 TraesCS5A01G265300 chr2D 86.458 576 36 14 1163 1703 584264419 584264987 1.760000e-165 593.0
23 TraesCS5A01G265300 chr2D 80.909 770 121 24 1 750 610110060 610110823 1.060000e-162 584.0
24 TraesCS5A01G265300 chr2D 92.373 354 22 5 6905 7254 584276229 584276581 3.950000e-137 499.0
25 TraesCS5A01G265300 chr2D 82.514 366 35 13 6750 7105 31671624 31671278 2.000000e-75 294.0
26 TraesCS5A01G265300 chr2D 90.411 219 16 4 6641 6858 584276024 584276238 4.330000e-72 283.0
27 TraesCS5A01G265300 chr2D 85.955 178 18 6 757 927 536590576 536590753 4.510000e-42 183.0
28 TraesCS5A01G265300 chr2B 93.991 932 46 8 5278 6207 703702650 703703573 0.000000e+00 1402.0
29 TraesCS5A01G265300 chr2B 90.794 869 53 17 3233 4084 703700672 703701530 0.000000e+00 1136.0
30 TraesCS5A01G265300 chr2B 91.540 792 58 8 4357 5143 703701865 703702652 0.000000e+00 1083.0
31 TraesCS5A01G265300 chr2B 92.857 644 44 2 1685 2327 703689281 703689923 0.000000e+00 933.0
32 TraesCS5A01G265300 chr2B 92.897 535 28 7 2710 3236 703700095 703700627 0.000000e+00 769.0
33 TraesCS5A01G265300 chr2B 92.157 510 34 4 949 1454 703666201 703666708 0.000000e+00 715.0
34 TraesCS5A01G265300 chr2B 94.817 328 13 2 2328 2651 703699691 703700018 6.560000e-140 508.0
35 TraesCS5A01G265300 chr2B 94.863 292 12 2 6155 6446 703703676 703703964 3.120000e-123 453.0
36 TraesCS5A01G265300 chr2B 83.213 417 53 14 6701 7106 51733636 51733226 4.180000e-97 366.0
37 TraesCS5A01G265300 chr2B 81.473 421 46 14 6701 7105 132849475 132849071 4.270000e-82 316.0
38 TraesCS5A01G265300 chr2B 87.288 236 20 6 4121 4356 703701528 703701753 2.030000e-65 261.0
39 TraesCS5A01G265300 chr2B 90.000 140 14 0 6503 6642 641175540 641175401 1.620000e-41 182.0
40 TraesCS5A01G265300 chr2B 79.371 286 27 12 1446 1706 703688536 703688814 9.770000e-39 172.0
41 TraesCS5A01G265300 chr4A 91.599 619 46 3 2174 2786 524283134 524283752 0.000000e+00 850.0
42 TraesCS5A01G265300 chr4A 84.865 185 21 6 750 927 436020441 436020625 5.840000e-41 180.0
43 TraesCS5A01G265300 chr6D 85.789 760 93 13 1 748 412198368 412197612 0.000000e+00 791.0
44 TraesCS5A01G265300 chr6D 83.901 764 105 17 1 752 368058633 368059390 0.000000e+00 713.0
45 TraesCS5A01G265300 chr6D 86.628 172 16 6 763 927 309809022 309809193 4.510000e-42 183.0
46 TraesCS5A01G265300 chr3D 83.267 759 115 12 1 750 552622616 552621861 0.000000e+00 688.0
47 TraesCS5A01G265300 chr3D 80.884 769 123 22 1 750 109745502 109746265 1.060000e-162 584.0
48 TraesCS5A01G265300 chr3D 95.205 146 7 0 6503 6648 16203752 16203607 1.590000e-56 231.0
49 TraesCS5A01G265300 chr6A 82.337 753 121 12 1 746 6017849 6018596 1.720000e-180 643.0
50 TraesCS5A01G265300 chr6A 94.631 149 8 0 6496 6644 81184853 81185001 1.590000e-56 231.0
51 TraesCS5A01G265300 chr1D 82.292 768 111 23 1 748 16337572 16338334 6.200000e-180 641.0
52 TraesCS5A01G265300 chr1D 81.641 768 115 23 1 748 16347760 16348521 1.350000e-171 614.0
53 TraesCS5A01G265300 chr1D 84.476 496 60 5 4934 5413 374479973 374480467 2.390000e-129 473.0
54 TraesCS5A01G265300 chr1D 86.441 236 22 4 4708 4943 374479142 374479367 4.390000e-62 250.0
55 TraesCS5A01G265300 chr1D 87.135 171 15 6 764 927 204434835 204435005 3.490000e-43 187.0
56 TraesCS5A01G265300 chr1D 91.139 79 6 1 1190 1268 475432700 475432623 1.010000e-18 106.0
57 TraesCS5A01G265300 chrUn 81.641 768 115 23 1 748 305007127 305007888 1.350000e-171 614.0
58 TraesCS5A01G265300 chr1B 81.906 724 89 19 4715 5413 499543739 499544445 2.290000e-159 573.0
59 TraesCS5A01G265300 chr1B 93.571 140 9 0 6503 6642 491757586 491757447 7.450000e-50 209.0
60 TraesCS5A01G265300 chr1B 85.393 178 19 6 757 927 206683255 206683432 2.100000e-40 178.0
61 TraesCS5A01G265300 chr3A 96.124 129 5 0 6514 6642 230999202 230999074 2.070000e-50 211.0
62 TraesCS5A01G265300 chr3A 90.850 153 14 0 6498 6650 663440688 663440536 9.630000e-49 206.0
63 TraesCS5A01G265300 chr7B 89.865 148 15 0 6501 6648 698510722 698510869 2.700000e-44 191.0
64 TraesCS5A01G265300 chr7A 85.876 177 18 6 757 927 329988927 329989102 1.620000e-41 182.0
65 TraesCS5A01G265300 chr7D 85.475 179 17 8 757 927 196901065 196901242 2.100000e-40 178.0
66 TraesCS5A01G265300 chr6B 85.393 178 18 7 757 927 363754115 363753939 2.100000e-40 178.0
67 TraesCS5A01G265300 chr4D 85.393 178 19 6 757 927 185353596 185353773 2.100000e-40 178.0
68 TraesCS5A01G265300 chr1A 90.099 101 7 1 4700 4797 474234171 474234271 2.150000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G265300 chr5A 476998711 477006035 7324 False 13527.000000 13527 100.000000 1 7325 1 chr5A.!!$F1 7324
1 TraesCS5A01G265300 chr5D 375987008 375993834 6826 False 2663.575000 5566 97.475500 949 7325 4 chr5D.!!$F1 6376
2 TraesCS5A01G265300 chr5B 448885128 448892441 7313 False 2555.000000 5336 96.555500 949 7172 4 chr5B.!!$F1 6223
3 TraesCS5A01G265300 chr2A 718458602 718465489 6887 False 1601.000000 3057 93.641800 949 6707 5 chr2A.!!$F2 5758
4 TraesCS5A01G265300 chr2A 702075201 702075819 618 True 828.000000 828 90.953000 2174 2786 1 chr2A.!!$R2 612
5 TraesCS5A01G265300 chr2D 584271294 584276581 5287 False 1331.800000 2987 92.103600 2328 7254 5 chr2D.!!$F4 4926
6 TraesCS5A01G265300 chr2D 584264419 584266100 1681 False 788.000000 983 90.292500 1163 2330 2 chr2D.!!$F3 1167
7 TraesCS5A01G265300 chr2D 610110060 610110823 763 False 584.000000 584 80.909000 1 750 1 chr2D.!!$F2 749
8 TraesCS5A01G265300 chr2B 703699691 703703964 4273 False 801.714286 1402 92.312857 2328 6446 7 chr2B.!!$F3 4118
9 TraesCS5A01G265300 chr2B 703666201 703666708 507 False 715.000000 715 92.157000 949 1454 1 chr2B.!!$F1 505
10 TraesCS5A01G265300 chr2B 703688536 703689923 1387 False 552.500000 933 86.114000 1446 2327 2 chr2B.!!$F2 881
11 TraesCS5A01G265300 chr4A 524283134 524283752 618 False 850.000000 850 91.599000 2174 2786 1 chr4A.!!$F2 612
12 TraesCS5A01G265300 chr6D 412197612 412198368 756 True 791.000000 791 85.789000 1 748 1 chr6D.!!$R1 747
13 TraesCS5A01G265300 chr6D 368058633 368059390 757 False 713.000000 713 83.901000 1 752 1 chr6D.!!$F2 751
14 TraesCS5A01G265300 chr3D 552621861 552622616 755 True 688.000000 688 83.267000 1 750 1 chr3D.!!$R2 749
15 TraesCS5A01G265300 chr3D 109745502 109746265 763 False 584.000000 584 80.884000 1 750 1 chr3D.!!$F1 749
16 TraesCS5A01G265300 chr6A 6017849 6018596 747 False 643.000000 643 82.337000 1 746 1 chr6A.!!$F1 745
17 TraesCS5A01G265300 chr1D 16337572 16338334 762 False 641.000000 641 82.292000 1 748 1 chr1D.!!$F1 747
18 TraesCS5A01G265300 chr1D 16347760 16348521 761 False 614.000000 614 81.641000 1 748 1 chr1D.!!$F2 747
19 TraesCS5A01G265300 chr1D 374479142 374480467 1325 False 361.500000 473 85.458500 4708 5413 2 chr1D.!!$F4 705
20 TraesCS5A01G265300 chrUn 305007127 305007888 761 False 614.000000 614 81.641000 1 748 1 chrUn.!!$F1 747
21 TraesCS5A01G265300 chr1B 499543739 499544445 706 False 573.000000 573 81.906000 4715 5413 1 chr1B.!!$F2 698

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
931 944 0.030235 GGCAACCAAAACCTCGTGAC 59.970 55.000 0.00 0.0 0.00 3.67 F
932 945 0.736053 GCAACCAAAACCTCGTGACA 59.264 50.000 0.00 0.0 0.00 3.58 F
933 946 1.533129 GCAACCAAAACCTCGTGACAC 60.533 52.381 0.00 0.0 0.00 3.67 F
2040 2802 1.680735 TGCGGAGTTCAGTTTTGCAAT 59.319 42.857 0.00 0.0 0.00 3.56 F
2548 3323 4.038642 TGTTGGTTGCTTCCCATCTAAAAC 59.961 41.667 0.00 0.0 0.00 2.43 F
3502 4853 1.586541 GTTGCTTTAGGTGGCTGGC 59.413 57.895 0.00 0.0 0.00 4.85 F
4307 5683 3.936564 ACTTTGCTCTTCTCTGACATCC 58.063 45.455 0.00 0.0 0.00 3.51 F
5865 8013 0.385348 CACGCGCAAAAGCACATACA 60.385 50.000 5.73 0.0 36.85 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2368 3134 0.746563 CTCTCGACTCTTCCTCGCCT 60.747 60.000 0.00 0.0 0.00 5.52 R
2761 3601 6.817641 AGACAGAATGCATTAGAAGAGACAAG 59.182 38.462 12.97 0.0 42.53 3.16 R
2981 3823 3.483808 TGGTGACAATGACACAGCTTA 57.516 42.857 16.57 0.0 39.65 3.09 R
3502 4853 4.201851 CCATTGGATGAAAACTAGCTCACG 60.202 45.833 0.00 0.0 0.00 4.35 R
4307 5683 2.564771 TGCACAGAAGTCTGAAACTGG 58.435 47.619 15.15 0.0 46.59 4.00 R
5317 7462 1.338020 CGCTGCCCTTTGATTTATCCC 59.662 52.381 0.00 0.0 0.00 3.85 R
6093 8245 5.098211 GCAGAAGAAAACATTACAGCATCC 58.902 41.667 0.00 0.0 0.00 3.51 R
7241 10260 0.106149 GGTGGCATTAGTCCTACCGG 59.894 60.000 0.00 0.0 0.00 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 4.664677 GTGCAGTGGAGCGTCGGT 62.665 66.667 0.00 0.00 37.31 4.69
86 87 1.136147 CGTCGGTGAAGTAGTCGGG 59.864 63.158 0.00 0.00 0.00 5.14
174 176 1.701545 CTCGCCGCGGCTTTTCATTA 61.702 55.000 43.60 19.14 39.32 1.90
180 182 0.446222 GCGGCTTTTCATTACTCGCA 59.554 50.000 0.00 0.00 41.10 5.10
196 198 4.399395 CAAGCAGGCTGGCGAGGA 62.399 66.667 17.64 0.00 39.27 3.71
259 261 2.964310 GCTTCCTCCTCCAGCAGCA 61.964 63.158 0.00 0.00 33.45 4.41
261 263 1.537397 TTCCTCCTCCAGCAGCACT 60.537 57.895 0.00 0.00 0.00 4.40
262 264 1.130054 TTCCTCCTCCAGCAGCACTT 61.130 55.000 0.00 0.00 0.00 3.16
382 394 2.345991 CGGGAAACTCGCCCAGAA 59.654 61.111 0.00 0.00 46.36 3.02
396 408 0.838122 CCAGAAGGTGGTGGAGAGGT 60.838 60.000 0.00 0.00 42.17 3.85
431 444 1.189524 TTCTCTCTTTTCCGGCGGGA 61.190 55.000 27.98 16.80 41.83 5.14
453 466 0.186630 TGGCCTATCTAGCGGTGGTA 59.813 55.000 3.32 0.00 0.00 3.25
516 529 3.805497 GGGGGTGGGGGACGAATC 61.805 72.222 0.00 0.00 0.00 2.52
517 530 2.691252 GGGGTGGGGGACGAATCT 60.691 66.667 0.00 0.00 0.00 2.40
518 531 2.590092 GGGTGGGGGACGAATCTG 59.410 66.667 0.00 0.00 0.00 2.90
519 532 2.590092 GGTGGGGGACGAATCTGG 59.410 66.667 0.00 0.00 0.00 3.86
520 533 1.993391 GGTGGGGGACGAATCTGGA 60.993 63.158 0.00 0.00 0.00 3.86
521 534 1.559065 GGTGGGGGACGAATCTGGAA 61.559 60.000 0.00 0.00 0.00 3.53
522 535 0.107654 GTGGGGGACGAATCTGGAAG 60.108 60.000 0.00 0.00 0.00 3.46
535 548 3.795688 TCTGGAAGATTGCCTTGACTT 57.204 42.857 0.00 0.00 38.67 3.01
536 549 4.104383 TCTGGAAGATTGCCTTGACTTT 57.896 40.909 0.00 0.00 38.67 2.66
537 550 4.473444 TCTGGAAGATTGCCTTGACTTTT 58.527 39.130 0.00 0.00 38.67 2.27
538 551 4.520492 TCTGGAAGATTGCCTTGACTTTTC 59.480 41.667 0.00 0.00 38.67 2.29
539 552 3.253188 TGGAAGATTGCCTTGACTTTTCG 59.747 43.478 0.00 0.00 34.68 3.46
540 553 3.253432 GGAAGATTGCCTTGACTTTTCGT 59.747 43.478 0.00 0.00 34.68 3.85
541 554 4.467735 GAAGATTGCCTTGACTTTTCGTC 58.532 43.478 0.00 0.00 43.14 4.20
542 555 3.744660 AGATTGCCTTGACTTTTCGTCT 58.255 40.909 0.00 0.00 43.25 4.18
543 556 3.499918 AGATTGCCTTGACTTTTCGTCTG 59.500 43.478 0.00 0.00 43.25 3.51
544 557 2.613026 TGCCTTGACTTTTCGTCTGA 57.387 45.000 0.00 0.00 43.25 3.27
545 558 2.210116 TGCCTTGACTTTTCGTCTGAC 58.790 47.619 0.00 0.00 43.25 3.51
546 559 2.210116 GCCTTGACTTTTCGTCTGACA 58.790 47.619 8.73 0.00 43.25 3.58
547 560 2.612212 GCCTTGACTTTTCGTCTGACAA 59.388 45.455 8.73 0.00 43.25 3.18
548 561 3.251004 GCCTTGACTTTTCGTCTGACAAT 59.749 43.478 8.73 0.00 43.25 2.71
549 562 4.776743 CCTTGACTTTTCGTCTGACAATG 58.223 43.478 8.73 1.08 43.25 2.82
550 563 4.273480 CCTTGACTTTTCGTCTGACAATGT 59.727 41.667 8.73 4.16 43.25 2.71
551 564 4.794248 TGACTTTTCGTCTGACAATGTG 57.206 40.909 8.73 0.00 43.25 3.21
552 565 3.559655 TGACTTTTCGTCTGACAATGTGG 59.440 43.478 8.73 0.00 43.25 4.17
553 566 2.290641 ACTTTTCGTCTGACAATGTGGC 59.709 45.455 8.73 0.00 0.00 5.01
554 567 1.234821 TTTCGTCTGACAATGTGGCC 58.765 50.000 8.73 0.00 0.00 5.36
555 568 0.605319 TTCGTCTGACAATGTGGCCC 60.605 55.000 8.73 0.00 0.00 5.80
556 569 1.302431 CGTCTGACAATGTGGCCCA 60.302 57.895 8.73 0.00 0.00 5.36
557 570 1.577328 CGTCTGACAATGTGGCCCAC 61.577 60.000 7.01 7.01 34.56 4.61
558 571 1.302431 TCTGACAATGTGGCCCACG 60.302 57.895 9.78 0.00 37.14 4.94
559 572 2.981560 CTGACAATGTGGCCCACGC 61.982 63.158 9.78 0.00 37.14 5.34
560 573 2.983030 GACAATGTGGCCCACGCA 60.983 61.111 9.78 0.00 44.94 5.24
565 578 4.972733 TGTGGCCCACGCATGCTT 62.973 61.111 17.13 2.67 37.14 3.91
566 579 3.683937 GTGGCCCACGCATGCTTT 61.684 61.111 17.13 0.00 36.38 3.51
567 580 2.916703 TGGCCCACGCATGCTTTT 60.917 55.556 17.13 0.00 36.38 2.27
568 581 2.343387 GGCCCACGCATGCTTTTT 59.657 55.556 17.13 0.00 36.38 1.94
569 582 1.737735 GGCCCACGCATGCTTTTTC 60.738 57.895 17.13 1.89 36.38 2.29
570 583 1.737735 GCCCACGCATGCTTTTTCC 60.738 57.895 17.13 0.00 34.03 3.13
571 584 1.966762 CCCACGCATGCTTTTTCCT 59.033 52.632 17.13 0.00 0.00 3.36
572 585 0.318120 CCCACGCATGCTTTTTCCTT 59.682 50.000 17.13 0.00 0.00 3.36
573 586 1.669795 CCCACGCATGCTTTTTCCTTC 60.670 52.381 17.13 0.00 0.00 3.46
574 587 1.669795 CCACGCATGCTTTTTCCTTCC 60.670 52.381 17.13 0.00 0.00 3.46
575 588 0.603065 ACGCATGCTTTTTCCTTCCC 59.397 50.000 17.13 0.00 0.00 3.97
576 589 0.890683 CGCATGCTTTTTCCTTCCCT 59.109 50.000 17.13 0.00 0.00 4.20
577 590 2.091541 CGCATGCTTTTTCCTTCCCTA 58.908 47.619 17.13 0.00 0.00 3.53
578 591 2.098117 CGCATGCTTTTTCCTTCCCTAG 59.902 50.000 17.13 0.00 0.00 3.02
579 592 3.356290 GCATGCTTTTTCCTTCCCTAGA 58.644 45.455 11.37 0.00 0.00 2.43
580 593 3.379688 GCATGCTTTTTCCTTCCCTAGAG 59.620 47.826 11.37 0.00 0.00 2.43
581 594 3.073274 TGCTTTTTCCTTCCCTAGAGC 57.927 47.619 0.00 0.00 0.00 4.09
582 595 2.290960 TGCTTTTTCCTTCCCTAGAGCC 60.291 50.000 0.00 0.00 0.00 4.70
583 596 2.946341 GCTTTTTCCTTCCCTAGAGCCC 60.946 54.545 0.00 0.00 0.00 5.19
584 597 1.296002 TTTTCCTTCCCTAGAGCCCC 58.704 55.000 0.00 0.00 0.00 5.80
585 598 0.623617 TTTCCTTCCCTAGAGCCCCC 60.624 60.000 0.00 0.00 0.00 5.40
586 599 2.844839 CCTTCCCTAGAGCCCCCG 60.845 72.222 0.00 0.00 0.00 5.73
587 600 2.282446 CTTCCCTAGAGCCCCCGA 59.718 66.667 0.00 0.00 0.00 5.14
588 601 1.834822 CTTCCCTAGAGCCCCCGAG 60.835 68.421 0.00 0.00 0.00 4.63
589 602 4.541648 TCCCTAGAGCCCCCGAGC 62.542 72.222 0.00 0.00 0.00 5.03
609 622 3.717294 CCCCTAGTGCGCTGGGTT 61.717 66.667 25.91 0.00 41.28 4.11
610 623 2.125106 CCCTAGTGCGCTGGGTTC 60.125 66.667 25.91 0.00 41.28 3.62
611 624 2.509336 CCTAGTGCGCTGGGTTCG 60.509 66.667 20.81 0.00 38.42 3.95
612 625 2.509336 CTAGTGCGCTGGGTTCGG 60.509 66.667 10.80 0.00 0.00 4.30
613 626 3.296709 CTAGTGCGCTGGGTTCGGT 62.297 63.158 10.80 0.00 0.00 4.69
614 627 3.291101 TAGTGCGCTGGGTTCGGTC 62.291 63.158 10.80 0.00 0.00 4.79
615 628 4.681978 GTGCGCTGGGTTCGGTCT 62.682 66.667 9.73 0.00 0.00 3.85
616 629 4.680237 TGCGCTGGGTTCGGTCTG 62.680 66.667 9.73 0.00 0.00 3.51
618 631 4.760047 CGCTGGGTTCGGTCTGGG 62.760 72.222 0.00 0.00 0.00 4.45
619 632 3.319198 GCTGGGTTCGGTCTGGGA 61.319 66.667 0.00 0.00 0.00 4.37
620 633 2.670148 GCTGGGTTCGGTCTGGGAT 61.670 63.158 0.00 0.00 0.00 3.85
621 634 1.522569 CTGGGTTCGGTCTGGGATC 59.477 63.158 0.00 0.00 0.00 3.36
622 635 2.298158 CTGGGTTCGGTCTGGGATCG 62.298 65.000 0.00 0.00 37.53 3.69
623 636 2.202892 GGTTCGGTCTGGGATCGC 60.203 66.667 2.14 2.14 35.99 4.58
624 637 2.577059 GTTCGGTCTGGGATCGCA 59.423 61.111 12.41 12.41 35.99 5.10
625 638 1.144057 GTTCGGTCTGGGATCGCAT 59.856 57.895 13.45 0.00 35.99 4.73
626 639 1.143838 TTCGGTCTGGGATCGCATG 59.856 57.895 13.45 7.77 35.99 4.06
627 640 2.280389 CGGTCTGGGATCGCATGG 60.280 66.667 13.45 2.74 26.80 3.66
628 641 2.592861 GGTCTGGGATCGCATGGC 60.593 66.667 13.45 8.82 0.00 4.40
629 642 2.592861 GTCTGGGATCGCATGGCC 60.593 66.667 13.45 0.00 0.00 5.36
630 643 3.877450 TCTGGGATCGCATGGCCC 61.877 66.667 13.45 0.00 42.38 5.80
631 644 4.962836 CTGGGATCGCATGGCCCC 62.963 72.222 13.45 0.00 41.31 5.80
633 646 4.521292 GGGATCGCATGGCCCCAA 62.521 66.667 0.00 0.00 38.69 4.12
634 647 2.441901 GGATCGCATGGCCCCAAA 60.442 61.111 0.00 0.00 0.00 3.28
635 648 2.057408 GGATCGCATGGCCCCAAAA 61.057 57.895 0.00 0.00 0.00 2.44
636 649 1.141665 GATCGCATGGCCCCAAAAC 59.858 57.895 0.00 0.00 0.00 2.43
637 650 2.612219 GATCGCATGGCCCCAAAACG 62.612 60.000 0.00 0.00 0.00 3.60
638 651 4.433877 CGCATGGCCCCAAAACGG 62.434 66.667 0.00 0.00 0.00 4.44
657 670 2.100216 CCGAGCCGGCAAATTTCG 59.900 61.111 31.54 26.97 41.17 3.46
663 676 2.867472 CGGCAAATTTCGGCGTCT 59.133 55.556 20.40 0.00 46.26 4.18
664 677 1.209127 CGGCAAATTTCGGCGTCTT 59.791 52.632 20.40 0.00 46.26 3.01
665 678 0.444651 CGGCAAATTTCGGCGTCTTA 59.555 50.000 20.40 0.00 46.26 2.10
666 679 1.789054 CGGCAAATTTCGGCGTCTTAC 60.789 52.381 20.40 0.00 46.26 2.34
667 680 1.520368 GCAAATTTCGGCGTCTTACG 58.480 50.000 6.85 0.00 45.88 3.18
668 681 1.789054 GCAAATTTCGGCGTCTTACGG 60.789 52.381 6.85 0.00 42.82 4.02
669 682 1.727880 CAAATTTCGGCGTCTTACGGA 59.272 47.619 6.85 0.00 42.82 4.69
670 683 1.353076 AATTTCGGCGTCTTACGGAC 58.647 50.000 6.85 0.00 42.82 4.79
677 690 4.053067 GTCTTACGGACGCGACTG 57.947 61.111 15.93 15.84 35.07 3.51
678 691 1.513586 GTCTTACGGACGCGACTGG 60.514 63.158 20.88 10.02 35.07 4.00
679 692 2.202570 CTTACGGACGCGACTGGG 60.203 66.667 20.88 7.48 0.00 4.45
680 693 2.985282 TTACGGACGCGACTGGGT 60.985 61.111 20.88 12.64 45.02 4.51
681 694 2.482296 CTTACGGACGCGACTGGGTT 62.482 60.000 20.88 3.47 41.99 4.11
682 695 2.086251 TTACGGACGCGACTGGGTTT 62.086 55.000 20.88 3.12 41.99 3.27
683 696 2.086251 TACGGACGCGACTGGGTTTT 62.086 55.000 20.88 2.75 41.99 2.43
684 697 2.248835 CGGACGCGACTGGGTTTTT 61.249 57.895 15.93 0.00 41.99 1.94
740 753 4.740822 GTTGGGGCGTGGCTGGAT 62.741 66.667 0.00 0.00 0.00 3.41
741 754 3.012119 TTGGGGCGTGGCTGGATA 61.012 61.111 0.00 0.00 0.00 2.59
742 755 2.382770 TTGGGGCGTGGCTGGATAT 61.383 57.895 0.00 0.00 0.00 1.63
743 756 2.281761 GGGGCGTGGCTGGATATG 60.282 66.667 0.00 0.00 0.00 1.78
744 757 2.980233 GGGCGTGGCTGGATATGC 60.980 66.667 0.00 0.00 0.00 3.14
745 758 2.111878 GGCGTGGCTGGATATGCT 59.888 61.111 0.00 0.00 0.00 3.79
746 759 1.963338 GGCGTGGCTGGATATGCTC 60.963 63.158 0.00 0.00 0.00 4.26
747 760 1.070445 GCGTGGCTGGATATGCTCT 59.930 57.895 0.00 0.00 0.00 4.09
748 761 0.533755 GCGTGGCTGGATATGCTCTT 60.534 55.000 0.00 0.00 0.00 2.85
749 762 1.270305 GCGTGGCTGGATATGCTCTTA 60.270 52.381 0.00 0.00 0.00 2.10
750 763 2.408050 CGTGGCTGGATATGCTCTTAC 58.592 52.381 0.00 0.00 0.00 2.34
751 764 2.036475 CGTGGCTGGATATGCTCTTACT 59.964 50.000 0.00 0.00 0.00 2.24
752 765 3.255888 CGTGGCTGGATATGCTCTTACTA 59.744 47.826 0.00 0.00 0.00 1.82
753 766 4.617067 CGTGGCTGGATATGCTCTTACTAG 60.617 50.000 0.00 0.00 0.00 2.57
754 767 4.282195 GTGGCTGGATATGCTCTTACTAGT 59.718 45.833 0.00 0.00 0.00 2.57
755 768 5.477291 GTGGCTGGATATGCTCTTACTAGTA 59.523 44.000 0.00 0.00 0.00 1.82
756 769 5.712446 TGGCTGGATATGCTCTTACTAGTAG 59.288 44.000 2.23 0.00 0.00 2.57
757 770 5.126384 GGCTGGATATGCTCTTACTAGTAGG 59.874 48.000 5.68 5.68 0.00 3.18
758 771 5.126384 GCTGGATATGCTCTTACTAGTAGGG 59.874 48.000 11.73 5.58 0.00 3.53
759 772 6.215515 TGGATATGCTCTTACTAGTAGGGT 57.784 41.667 11.73 0.23 0.00 4.34
760 773 6.621394 TGGATATGCTCTTACTAGTAGGGTT 58.379 40.000 11.73 0.00 0.00 4.11
761 774 7.073854 TGGATATGCTCTTACTAGTAGGGTTT 58.926 38.462 11.73 0.00 0.00 3.27
762 775 7.567622 TGGATATGCTCTTACTAGTAGGGTTTT 59.432 37.037 11.73 0.00 0.00 2.43
763 776 9.086758 GGATATGCTCTTACTAGTAGGGTTTTA 57.913 37.037 11.73 1.46 0.00 1.52
765 778 6.786967 TGCTCTTACTAGTAGGGTTTTAGG 57.213 41.667 11.73 0.00 0.00 2.69
766 779 5.659971 TGCTCTTACTAGTAGGGTTTTAGGG 59.340 44.000 11.73 2.06 0.00 3.53
767 780 5.660417 GCTCTTACTAGTAGGGTTTTAGGGT 59.340 44.000 11.73 0.00 0.00 4.34
768 781 6.406737 GCTCTTACTAGTAGGGTTTTAGGGTG 60.407 46.154 11.73 0.00 0.00 4.61
769 782 6.565036 TCTTACTAGTAGGGTTTTAGGGTGT 58.435 40.000 11.73 0.00 0.00 4.16
770 783 6.438425 TCTTACTAGTAGGGTTTTAGGGTGTG 59.562 42.308 11.73 0.00 0.00 3.82
771 784 4.496540 ACTAGTAGGGTTTTAGGGTGTGT 58.503 43.478 1.45 0.00 0.00 3.72
772 785 4.909695 ACTAGTAGGGTTTTAGGGTGTGTT 59.090 41.667 1.45 0.00 0.00 3.32
773 786 4.801521 AGTAGGGTTTTAGGGTGTGTTT 57.198 40.909 0.00 0.00 0.00 2.83
774 787 4.466827 AGTAGGGTTTTAGGGTGTGTTTG 58.533 43.478 0.00 0.00 0.00 2.93
775 788 2.673258 AGGGTTTTAGGGTGTGTTTGG 58.327 47.619 0.00 0.00 0.00 3.28
776 789 2.245287 AGGGTTTTAGGGTGTGTTTGGA 59.755 45.455 0.00 0.00 0.00 3.53
777 790 3.116900 AGGGTTTTAGGGTGTGTTTGGAT 60.117 43.478 0.00 0.00 0.00 3.41
778 791 3.644265 GGGTTTTAGGGTGTGTTTGGATT 59.356 43.478 0.00 0.00 0.00 3.01
779 792 4.502431 GGGTTTTAGGGTGTGTTTGGATTG 60.502 45.833 0.00 0.00 0.00 2.67
780 793 4.100344 GGTTTTAGGGTGTGTTTGGATTGT 59.900 41.667 0.00 0.00 0.00 2.71
781 794 4.927978 TTTAGGGTGTGTTTGGATTGTG 57.072 40.909 0.00 0.00 0.00 3.33
782 795 1.703411 AGGGTGTGTTTGGATTGTGG 58.297 50.000 0.00 0.00 0.00 4.17
783 796 0.033366 GGGTGTGTTTGGATTGTGGC 59.967 55.000 0.00 0.00 0.00 5.01
784 797 0.033366 GGTGTGTTTGGATTGTGGCC 59.967 55.000 0.00 0.00 0.00 5.36
785 798 0.749649 GTGTGTTTGGATTGTGGCCA 59.250 50.000 0.00 0.00 0.00 5.36
786 799 1.137872 GTGTGTTTGGATTGTGGCCAA 59.862 47.619 7.24 0.00 43.31 4.52
791 804 1.786937 TTGGATTGTGGCCAAAGTGT 58.213 45.000 7.24 0.00 42.13 3.55
792 805 2.666272 TGGATTGTGGCCAAAGTGTA 57.334 45.000 7.24 0.00 33.44 2.90
793 806 3.168035 TGGATTGTGGCCAAAGTGTAT 57.832 42.857 7.24 0.00 33.44 2.29
794 807 3.505386 TGGATTGTGGCCAAAGTGTATT 58.495 40.909 7.24 0.00 33.44 1.89
795 808 3.900601 TGGATTGTGGCCAAAGTGTATTT 59.099 39.130 7.24 0.00 33.44 1.40
796 809 4.346418 TGGATTGTGGCCAAAGTGTATTTT 59.654 37.500 7.24 0.00 33.44 1.82
797 810 5.540337 TGGATTGTGGCCAAAGTGTATTTTA 59.460 36.000 7.24 0.00 33.44 1.52
798 811 6.212388 TGGATTGTGGCCAAAGTGTATTTTAT 59.788 34.615 7.24 0.00 33.44 1.40
799 812 6.756542 GGATTGTGGCCAAAGTGTATTTTATC 59.243 38.462 7.24 0.00 33.44 1.75
800 813 6.656632 TTGTGGCCAAAGTGTATTTTATCA 57.343 33.333 7.24 0.00 0.00 2.15
801 814 6.656632 TGTGGCCAAAGTGTATTTTATCAA 57.343 33.333 7.24 0.00 0.00 2.57
802 815 7.055667 TGTGGCCAAAGTGTATTTTATCAAA 57.944 32.000 7.24 0.00 0.00 2.69
803 816 7.500992 TGTGGCCAAAGTGTATTTTATCAAAA 58.499 30.769 7.24 0.00 34.41 2.44
804 817 8.153550 TGTGGCCAAAGTGTATTTTATCAAAAT 58.846 29.630 7.24 2.73 43.19 1.82
805 818 8.998377 GTGGCCAAAGTGTATTTTATCAAAATT 58.002 29.630 7.24 0.00 41.16 1.82
806 819 9.566432 TGGCCAAAGTGTATTTTATCAAAATTT 57.434 25.926 0.61 0.00 41.16 1.82
826 839 9.492973 AAAATTTTGGTCATGACTTAAGATTGG 57.507 29.630 24.50 0.00 0.00 3.16
827 840 7.781324 ATTTTGGTCATGACTTAAGATTGGT 57.219 32.000 24.50 0.24 0.00 3.67
828 841 6.817765 TTTGGTCATGACTTAAGATTGGTC 57.182 37.500 24.50 4.75 0.00 4.02
829 842 5.762179 TGGTCATGACTTAAGATTGGTCT 57.238 39.130 24.50 0.00 35.82 3.85
830 843 6.126863 TGGTCATGACTTAAGATTGGTCTT 57.873 37.500 24.50 0.00 46.22 3.01
831 844 6.542821 TGGTCATGACTTAAGATTGGTCTTT 58.457 36.000 24.50 0.00 41.92 2.52
832 845 6.430925 TGGTCATGACTTAAGATTGGTCTTTG 59.569 38.462 24.50 0.21 41.92 2.77
833 846 6.431234 GGTCATGACTTAAGATTGGTCTTTGT 59.569 38.462 24.50 0.00 41.92 2.83
834 847 7.040409 GGTCATGACTTAAGATTGGTCTTTGTT 60.040 37.037 24.50 0.00 41.92 2.83
835 848 8.352942 GTCATGACTTAAGATTGGTCTTTGTTT 58.647 33.333 18.83 0.00 41.92 2.83
836 849 8.352201 TCATGACTTAAGATTGGTCTTTGTTTG 58.648 33.333 10.09 1.13 41.92 2.93
837 850 7.873719 TGACTTAAGATTGGTCTTTGTTTGA 57.126 32.000 10.09 0.00 41.92 2.69
838 851 8.287439 TGACTTAAGATTGGTCTTTGTTTGAA 57.713 30.769 10.09 0.00 41.92 2.69
839 852 8.912988 TGACTTAAGATTGGTCTTTGTTTGAAT 58.087 29.630 10.09 0.00 41.92 2.57
840 853 9.185192 GACTTAAGATTGGTCTTTGTTTGAATG 57.815 33.333 10.09 0.00 41.92 2.67
841 854 8.143835 ACTTAAGATTGGTCTTTGTTTGAATGG 58.856 33.333 10.09 0.00 41.92 3.16
842 855 6.484364 AAGATTGGTCTTTGTTTGAATGGT 57.516 33.333 0.00 0.00 41.92 3.55
843 856 6.484364 AGATTGGTCTTTGTTTGAATGGTT 57.516 33.333 0.00 0.00 0.00 3.67
844 857 6.282930 AGATTGGTCTTTGTTTGAATGGTTG 58.717 36.000 0.00 0.00 0.00 3.77
845 858 5.413309 TTGGTCTTTGTTTGAATGGTTGT 57.587 34.783 0.00 0.00 0.00 3.32
846 859 5.004922 TGGTCTTTGTTTGAATGGTTGTC 57.995 39.130 0.00 0.00 0.00 3.18
847 860 4.464244 TGGTCTTTGTTTGAATGGTTGTCA 59.536 37.500 0.00 0.00 0.00 3.58
848 861 5.047021 TGGTCTTTGTTTGAATGGTTGTCAA 60.047 36.000 0.00 0.00 33.21 3.18
849 862 6.048509 GGTCTTTGTTTGAATGGTTGTCAAT 58.951 36.000 0.00 0.00 35.03 2.57
850 863 6.538381 GGTCTTTGTTTGAATGGTTGTCAATT 59.462 34.615 0.00 0.00 35.03 2.32
851 864 7.065683 GGTCTTTGTTTGAATGGTTGTCAATTT 59.934 33.333 0.00 0.00 35.03 1.82
852 865 8.450180 GTCTTTGTTTGAATGGTTGTCAATTTT 58.550 29.630 0.00 0.00 35.03 1.82
853 866 9.007901 TCTTTGTTTGAATGGTTGTCAATTTTT 57.992 25.926 0.00 0.00 35.03 1.94
877 890 9.456147 TTTTAGCATGTTAATAAACTCTAGCCA 57.544 29.630 2.62 0.00 36.51 4.75
878 891 9.456147 TTTAGCATGTTAATAAACTCTAGCCAA 57.544 29.630 2.62 0.00 36.51 4.52
879 892 9.627123 TTAGCATGTTAATAAACTCTAGCCAAT 57.373 29.630 0.00 0.00 36.51 3.16
880 893 8.525290 AGCATGTTAATAAACTCTAGCCAATT 57.475 30.769 0.00 0.00 36.51 2.32
881 894 8.624776 AGCATGTTAATAAACTCTAGCCAATTC 58.375 33.333 0.00 0.00 36.51 2.17
882 895 8.405531 GCATGTTAATAAACTCTAGCCAATTCA 58.594 33.333 0.00 0.00 36.51 2.57
908 921 7.769272 TTTTTCTGACAATGTTGACCAAATC 57.231 32.000 0.00 0.00 0.00 2.17
909 922 6.462552 TTTCTGACAATGTTGACCAAATCA 57.537 33.333 0.00 0.00 34.65 2.57
910 923 6.653526 TTCTGACAATGTTGACCAAATCAT 57.346 33.333 0.00 0.00 37.11 2.45
911 924 6.016213 TCTGACAATGTTGACCAAATCATG 57.984 37.500 0.00 0.00 37.11 3.07
930 943 2.410466 GGCAACCAAAACCTCGTGA 58.590 52.632 0.00 0.00 0.00 4.35
931 944 0.030235 GGCAACCAAAACCTCGTGAC 59.970 55.000 0.00 0.00 0.00 3.67
932 945 0.736053 GCAACCAAAACCTCGTGACA 59.264 50.000 0.00 0.00 0.00 3.58
933 946 1.533129 GCAACCAAAACCTCGTGACAC 60.533 52.381 0.00 0.00 0.00 3.67
934 947 1.740585 CAACCAAAACCTCGTGACACA 59.259 47.619 6.37 0.00 0.00 3.72
935 948 2.116827 ACCAAAACCTCGTGACACAA 57.883 45.000 6.37 0.00 0.00 3.33
936 949 2.438411 ACCAAAACCTCGTGACACAAA 58.562 42.857 6.37 0.00 0.00 2.83
937 950 2.162809 ACCAAAACCTCGTGACACAAAC 59.837 45.455 6.37 0.00 0.00 2.93
938 951 2.478879 CCAAAACCTCGTGACACAAACC 60.479 50.000 6.37 0.00 0.00 3.27
939 952 2.116827 AAACCTCGTGACACAAACCA 57.883 45.000 6.37 0.00 0.00 3.67
940 953 2.116827 AACCTCGTGACACAAACCAA 57.883 45.000 6.37 0.00 0.00 3.67
941 954 2.116827 ACCTCGTGACACAAACCAAA 57.883 45.000 6.37 0.00 0.00 3.28
942 955 1.741145 ACCTCGTGACACAAACCAAAC 59.259 47.619 6.37 0.00 0.00 2.93
943 956 1.740585 CCTCGTGACACAAACCAAACA 59.259 47.619 6.37 0.00 0.00 2.83
944 957 2.477189 CCTCGTGACACAAACCAAACAC 60.477 50.000 6.37 0.00 0.00 3.32
945 958 2.152016 TCGTGACACAAACCAAACACA 58.848 42.857 6.37 0.00 0.00 3.72
946 959 2.095668 TCGTGACACAAACCAAACACAC 60.096 45.455 6.37 0.00 0.00 3.82
947 960 2.601804 GTGACACAAACCAAACACACC 58.398 47.619 0.00 0.00 0.00 4.16
1251 1275 2.997897 AAGGAGCTCGGCGACCTT 60.998 61.111 20.68 20.68 41.83 3.50
1480 1563 4.591321 ATTGGTGGGCAAGAAGAGATAA 57.409 40.909 0.00 0.00 0.00 1.75
1592 1679 5.647658 TCTGCTAGTACATTGGGAAAATGTG 59.352 40.000 12.72 0.00 40.70 3.21
1593 1680 5.321102 TGCTAGTACATTGGGAAAATGTGT 58.679 37.500 12.72 4.24 40.70 3.72
1594 1681 6.477253 TGCTAGTACATTGGGAAAATGTGTA 58.523 36.000 12.72 5.02 40.70 2.90
1595 1682 6.373216 TGCTAGTACATTGGGAAAATGTGTAC 59.627 38.462 12.72 7.04 43.22 2.90
1598 1685 5.944007 AGTACATTGGGAAAATGTGTACCTC 59.056 40.000 12.72 0.00 43.67 3.85
1618 1729 6.974965 ACCTCTTTCAGTTTTGCTTCTTATG 58.025 36.000 0.00 0.00 0.00 1.90
1717 2478 9.987272 CAGGAATTCATTCATACTGATACTACA 57.013 33.333 7.93 0.00 38.53 2.74
1731 2492 5.063204 TGATACTACAGTAATGCAATGGCC 58.937 41.667 0.00 0.00 34.85 5.36
1791 2552 4.196971 ACTTTGACCTGAACTGTAACCAC 58.803 43.478 0.00 0.00 0.00 4.16
1934 2695 4.021925 GGCCTCTGGGTCGCAGTT 62.022 66.667 15.83 0.00 34.45 3.16
2040 2802 1.680735 TGCGGAGTTCAGTTTTGCAAT 59.319 42.857 0.00 0.00 0.00 3.56
2368 3134 8.634335 TCATCTGATTATTTCCTGTTTGTCAA 57.366 30.769 0.00 0.00 0.00 3.18
2548 3323 4.038642 TGTTGGTTGCTTCCCATCTAAAAC 59.961 41.667 0.00 0.00 0.00 2.43
2717 3495 5.867903 ACAAGGTGATTTGGATGTTTTGA 57.132 34.783 0.00 0.00 32.32 2.69
3465 4811 8.788325 ACAAGGGTGTAATTATTAGAAGTGTC 57.212 34.615 0.00 0.00 35.72 3.67
3502 4853 1.586541 GTTGCTTTAGGTGGCTGGC 59.413 57.895 0.00 0.00 0.00 4.85
3830 5197 4.342665 ACTTAACTGAGAGTATGCCTAGCC 59.657 45.833 0.00 0.00 0.00 3.93
3880 5247 8.427902 AGTTCTATTCTATGCTGATATGGTCA 57.572 34.615 0.00 0.00 35.05 4.02
3881 5248 9.044646 AGTTCTATTCTATGCTGATATGGTCAT 57.955 33.333 0.00 0.00 35.97 3.06
4307 5683 3.936564 ACTTTGCTCTTCTCTGACATCC 58.063 45.455 0.00 0.00 0.00 3.51
4620 6118 4.965200 AGAATGCCCAGGAAGATACTAC 57.035 45.455 0.00 0.00 0.00 2.73
4666 6164 7.550906 ACTTCCTTTGATTCTTCCTCTAAATCG 59.449 37.037 0.00 0.00 33.13 3.34
4848 6346 9.181061 TGTTTCACTTAGCTAAACCTACTTTTT 57.819 29.630 7.74 0.00 33.21 1.94
5268 7412 4.831674 TGAAGATGAGGAGCTCAATGAA 57.168 40.909 17.19 0.00 44.04 2.57
5317 7462 2.304180 AGGTTGAAGACAGTGATGAGGG 59.696 50.000 0.00 0.00 0.00 4.30
5841 7989 9.860393 ATCTATATAAACTATTCTTCCCCACCT 57.140 33.333 0.00 0.00 0.00 4.00
5865 8013 0.385348 CACGCGCAAAAGCACATACA 60.385 50.000 5.73 0.00 36.85 2.29
5874 8022 4.539870 CAAAAGCACATACACTTGACCTG 58.460 43.478 0.00 0.00 0.00 4.00
6093 8245 3.436704 GGTGGCATTCCATATACGACATG 59.563 47.826 0.00 0.00 45.62 3.21
6116 8268 5.098211 GGATGCTGTAATGTTTTCTTCTGC 58.902 41.667 0.00 0.00 0.00 4.26
6119 8271 3.058224 GCTGTAATGTTTTCTTCTGCGGT 60.058 43.478 0.00 0.00 0.00 5.68
6333 8643 2.670939 GCCTGGAAATAATGAGGGCTT 58.329 47.619 0.00 0.00 35.73 4.35
6484 9498 4.577283 TGTGATGAACGACGAGGATGTATA 59.423 41.667 0.00 0.00 0.00 1.47
6485 9499 5.240844 TGTGATGAACGACGAGGATGTATAT 59.759 40.000 0.00 0.00 0.00 0.86
6503 9517 9.921637 GATGTATATGGGAAGAAAGAGACTAAG 57.078 37.037 0.00 0.00 0.00 2.18
6504 9518 8.251383 TGTATATGGGAAGAAAGAGACTAAGG 57.749 38.462 0.00 0.00 0.00 2.69
6506 9520 3.182152 TGGGAAGAAAGAGACTAAGGGG 58.818 50.000 0.00 0.00 0.00 4.79
6507 9521 2.506231 GGGAAGAAAGAGACTAAGGGGG 59.494 54.545 0.00 0.00 0.00 5.40
6509 9523 3.055021 GGAAGAAAGAGACTAAGGGGGTG 60.055 52.174 0.00 0.00 0.00 4.61
6510 9524 3.277416 AGAAAGAGACTAAGGGGGTGT 57.723 47.619 0.00 0.00 0.00 4.16
6512 9526 3.981375 AGAAAGAGACTAAGGGGGTGTTT 59.019 43.478 0.00 0.00 0.00 2.83
6516 9530 2.576648 GAGACTAAGGGGGTGTTTGGAT 59.423 50.000 0.00 0.00 0.00 3.41
6518 9532 3.010250 AGACTAAGGGGGTGTTTGGATTC 59.990 47.826 0.00 0.00 0.00 2.52
6520 9534 0.116342 AAGGGGGTGTTTGGATTCCC 59.884 55.000 0.00 0.00 39.22 3.97
6521 9535 0.780090 AGGGGGTGTTTGGATTCCCT 60.780 55.000 0.00 0.00 39.74 4.20
6522 9536 0.324368 GGGGGTGTTTGGATTCCCTC 60.324 60.000 0.00 0.00 39.80 4.30
6574 9588 1.379527 GCTGCGGGCTAAAATAGTGT 58.620 50.000 0.00 0.00 38.06 3.55
6575 9589 2.557317 GCTGCGGGCTAAAATAGTGTA 58.443 47.619 0.00 0.00 38.06 2.90
6577 9591 3.793559 CTGCGGGCTAAAATAGTGTAGT 58.206 45.455 0.00 0.00 0.00 2.73
6578 9592 4.189231 CTGCGGGCTAAAATAGTGTAGTT 58.811 43.478 0.00 0.00 0.00 2.24
6580 9594 3.311596 GCGGGCTAAAATAGTGTAGTTGG 59.688 47.826 0.00 0.00 0.00 3.77
6581 9595 4.761975 CGGGCTAAAATAGTGTAGTTGGA 58.238 43.478 0.00 0.00 0.00 3.53
6582 9596 5.180271 CGGGCTAAAATAGTGTAGTTGGAA 58.820 41.667 0.00 0.00 0.00 3.53
6583 9597 5.644636 CGGGCTAAAATAGTGTAGTTGGAAA 59.355 40.000 0.00 0.00 0.00 3.13
6584 9598 6.183360 CGGGCTAAAATAGTGTAGTTGGAAAG 60.183 42.308 0.00 0.00 0.00 2.62
6585 9599 6.657966 GGGCTAAAATAGTGTAGTTGGAAAGT 59.342 38.462 0.00 0.00 0.00 2.66
6586 9600 7.825761 GGGCTAAAATAGTGTAGTTGGAAAGTA 59.174 37.037 0.00 0.00 0.00 2.24
6587 9601 8.880750 GGCTAAAATAGTGTAGTTGGAAAGTAG 58.119 37.037 0.00 0.00 31.17 2.57
6588 9602 8.880750 GCTAAAATAGTGTAGTTGGAAAGTAGG 58.119 37.037 0.00 0.00 31.17 3.18
6589 9603 7.683437 AAAATAGTGTAGTTGGAAAGTAGGC 57.317 36.000 0.00 0.00 31.17 3.93
6590 9604 6.368779 AATAGTGTAGTTGGAAAGTAGGCA 57.631 37.500 0.00 0.00 31.17 4.75
6591 9605 4.004196 AGTGTAGTTGGAAAGTAGGCAC 57.996 45.455 0.00 0.00 31.17 5.01
6592 9606 3.646637 AGTGTAGTTGGAAAGTAGGCACT 59.353 43.478 0.00 0.00 46.37 4.40
6593 9607 3.995048 GTGTAGTTGGAAAGTAGGCACTC 59.005 47.826 0.00 0.00 41.75 3.51
6594 9608 2.861147 AGTTGGAAAGTAGGCACTCC 57.139 50.000 0.00 0.00 41.75 3.85
6595 9609 1.002087 AGTTGGAAAGTAGGCACTCCG 59.998 52.381 0.00 0.00 41.75 4.63
6596 9610 0.321298 TTGGAAAGTAGGCACTCCGC 60.321 55.000 0.00 0.00 41.75 5.54
6597 9611 1.295423 GGAAAGTAGGCACTCCGCA 59.705 57.895 0.00 0.00 45.17 5.69
6598 9612 0.741221 GGAAAGTAGGCACTCCGCAG 60.741 60.000 0.00 0.00 45.17 5.18
6599 9613 0.246635 GAAAGTAGGCACTCCGCAGA 59.753 55.000 0.00 0.00 45.17 4.26
6600 9614 0.905357 AAAGTAGGCACTCCGCAGAT 59.095 50.000 0.00 0.00 45.17 2.90
6601 9615 0.461961 AAGTAGGCACTCCGCAGATC 59.538 55.000 0.00 0.00 45.17 2.75
6602 9616 1.068250 GTAGGCACTCCGCAGATCC 59.932 63.158 0.00 0.00 45.17 3.36
6603 9617 1.075970 TAGGCACTCCGCAGATCCT 60.076 57.895 0.00 0.00 45.17 3.24
6604 9618 1.395045 TAGGCACTCCGCAGATCCTG 61.395 60.000 2.21 0.00 45.17 3.86
6605 9619 2.581354 GCACTCCGCAGATCCTGT 59.419 61.111 0.00 0.00 41.79 4.00
6606 9620 1.676678 GGCACTCCGCAGATCCTGTA 61.677 60.000 0.00 0.00 45.17 2.74
6607 9621 0.175760 GCACTCCGCAGATCCTGTAA 59.824 55.000 0.00 0.00 41.79 2.41
6608 9622 1.202580 GCACTCCGCAGATCCTGTAAT 60.203 52.381 0.00 0.00 41.79 1.89
6609 9623 2.743183 GCACTCCGCAGATCCTGTAATT 60.743 50.000 0.00 0.00 41.79 1.40
6610 9624 3.126831 CACTCCGCAGATCCTGTAATTC 58.873 50.000 0.00 0.00 33.43 2.17
6611 9625 3.034635 ACTCCGCAGATCCTGTAATTCT 58.965 45.455 0.00 0.00 33.43 2.40
6612 9626 3.181471 ACTCCGCAGATCCTGTAATTCTG 60.181 47.826 0.00 0.00 39.87 3.02
6616 9630 3.459232 CAGATCCTGTAATTCTGCGGA 57.541 47.619 0.00 0.00 31.35 5.54
6617 9631 3.388308 CAGATCCTGTAATTCTGCGGAG 58.612 50.000 0.00 0.00 31.35 4.63
6637 9651 2.266055 GGTGGAGAGCCGAACAGG 59.734 66.667 0.00 0.00 44.97 4.00
6859 9875 4.446371 GAGGAATCACATTCGTGGAAGAT 58.554 43.478 0.00 0.00 43.79 2.40
7115 10134 1.003233 GGGGACTTCCATTGAGTTCGT 59.997 52.381 0.00 0.00 37.91 3.85
7208 10227 4.775780 TCCTTTAGGATCGACAGGAAAGAA 59.224 41.667 11.34 0.00 39.78 2.52
7241 10260 1.657181 CAACCACCGCGCTTCAAAC 60.657 57.895 5.56 0.00 0.00 2.93
7257 10276 2.093341 TCAAACCGGTAGGACTAATGCC 60.093 50.000 8.00 0.00 41.02 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 1.005097 TGCTCTACCCCGACTACTTCA 59.995 52.381 0.00 0.00 0.00 3.02
104 105 1.004745 AGAACCGGCATTGTCTGGAAT 59.995 47.619 0.00 2.44 36.35 3.01
113 114 1.686052 TGAAAGCAAAGAACCGGCATT 59.314 42.857 0.00 0.00 0.00 3.56
180 182 4.400961 GTCCTCGCCAGCCTGCTT 62.401 66.667 0.00 0.00 0.00 3.91
196 198 0.179100 CATCTCATGGTTCTCGCCGT 60.179 55.000 0.00 0.00 0.00 5.68
204 206 2.356535 GGACAAGGAGCATCTCATGGTT 60.357 50.000 0.00 0.00 41.77 3.67
259 261 3.816524 CGAGGAGGCGCTCGAAGT 61.817 66.667 10.91 0.00 44.85 3.01
261 263 3.812019 GACGAGGAGGCGCTCGAA 61.812 66.667 21.54 0.00 44.85 3.71
382 394 2.529744 GGCAACCTCTCCACCACCT 61.530 63.158 0.00 0.00 0.00 4.00
396 408 2.517402 AAGGTTTCACCGCGGCAA 60.517 55.556 28.58 16.31 44.90 4.52
431 444 1.072331 CCACCGCTAGATAGGCCATTT 59.928 52.381 5.01 0.00 0.00 2.32
503 516 0.107654 CTTCCAGATTCGTCCCCCAC 60.108 60.000 0.00 0.00 0.00 4.61
504 517 0.252513 TCTTCCAGATTCGTCCCCCA 60.253 55.000 0.00 0.00 0.00 4.96
505 518 1.132500 ATCTTCCAGATTCGTCCCCC 58.868 55.000 0.00 0.00 28.69 5.40
506 519 2.565841 CAATCTTCCAGATTCGTCCCC 58.434 52.381 0.00 0.00 42.67 4.81
507 520 1.943340 GCAATCTTCCAGATTCGTCCC 59.057 52.381 0.00 0.00 42.67 4.46
508 521 1.943340 GGCAATCTTCCAGATTCGTCC 59.057 52.381 0.00 0.00 42.67 4.79
509 522 2.911484 AGGCAATCTTCCAGATTCGTC 58.089 47.619 0.00 0.00 42.67 4.20
510 523 3.012518 CAAGGCAATCTTCCAGATTCGT 58.987 45.455 0.00 0.00 42.67 3.85
511 524 3.064545 GTCAAGGCAATCTTCCAGATTCG 59.935 47.826 0.00 0.00 42.67 3.34
512 525 4.268359 AGTCAAGGCAATCTTCCAGATTC 58.732 43.478 0.00 0.00 42.67 2.52
513 526 4.313020 AGTCAAGGCAATCTTCCAGATT 57.687 40.909 0.00 0.00 45.23 2.40
514 527 4.313020 AAGTCAAGGCAATCTTCCAGAT 57.687 40.909 0.00 0.00 36.28 2.90
515 528 3.795688 AAGTCAAGGCAATCTTCCAGA 57.204 42.857 0.00 0.00 32.41 3.86
516 529 4.614535 CGAAAAGTCAAGGCAATCTTCCAG 60.615 45.833 0.00 0.00 32.41 3.86
517 530 3.253188 CGAAAAGTCAAGGCAATCTTCCA 59.747 43.478 0.00 0.00 32.41 3.53
518 531 3.253432 ACGAAAAGTCAAGGCAATCTTCC 59.747 43.478 0.00 0.00 32.41 3.46
519 532 4.489679 ACGAAAAGTCAAGGCAATCTTC 57.510 40.909 0.00 0.00 32.41 2.87
532 545 2.290641 GCCACATTGTCAGACGAAAAGT 59.709 45.455 0.00 0.00 0.00 2.66
533 546 2.350772 GGCCACATTGTCAGACGAAAAG 60.351 50.000 0.00 0.00 0.00 2.27
534 547 1.606668 GGCCACATTGTCAGACGAAAA 59.393 47.619 0.00 0.00 0.00 2.29
535 548 1.234821 GGCCACATTGTCAGACGAAA 58.765 50.000 0.00 0.00 0.00 3.46
536 549 0.605319 GGGCCACATTGTCAGACGAA 60.605 55.000 4.39 0.00 0.00 3.85
537 550 1.003839 GGGCCACATTGTCAGACGA 60.004 57.895 4.39 0.00 0.00 4.20
538 551 1.302431 TGGGCCACATTGTCAGACG 60.302 57.895 0.00 0.00 0.00 4.18
539 552 1.577328 CGTGGGCCACATTGTCAGAC 61.577 60.000 34.11 5.41 33.40 3.51
540 553 1.302431 CGTGGGCCACATTGTCAGA 60.302 57.895 34.11 0.00 33.40 3.27
541 554 2.981560 GCGTGGGCCACATTGTCAG 61.982 63.158 34.11 17.99 33.40 3.51
542 555 2.983030 GCGTGGGCCACATTGTCA 60.983 61.111 34.11 0.00 33.40 3.58
543 556 2.342650 ATGCGTGGGCCACATTGTC 61.343 57.895 34.11 17.73 38.85 3.18
544 557 2.283101 ATGCGTGGGCCACATTGT 60.283 55.556 34.11 15.31 38.85 2.71
545 558 2.182284 CATGCGTGGGCCACATTG 59.818 61.111 34.11 23.21 38.85 2.82
546 559 3.762247 GCATGCGTGGGCCACATT 61.762 61.111 34.11 16.47 38.85 2.71
547 560 4.746309 AGCATGCGTGGGCCACAT 62.746 61.111 34.11 19.64 38.85 3.21
548 561 4.972733 AAGCATGCGTGGGCCACA 62.973 61.111 34.11 18.16 38.85 4.17
549 562 2.713927 AAAAAGCATGCGTGGGCCAC 62.714 55.000 26.95 26.95 38.85 5.01
550 563 2.433231 GAAAAAGCATGCGTGGGCCA 62.433 55.000 13.01 0.00 38.85 5.36
551 564 1.737735 GAAAAAGCATGCGTGGGCC 60.738 57.895 13.01 0.00 38.85 5.80
552 565 1.737735 GGAAAAAGCATGCGTGGGC 60.738 57.895 13.01 3.17 40.52 5.36
553 566 0.318120 AAGGAAAAAGCATGCGTGGG 59.682 50.000 13.01 0.00 0.00 4.61
554 567 1.669795 GGAAGGAAAAAGCATGCGTGG 60.670 52.381 13.01 0.00 0.00 4.94
555 568 1.669795 GGGAAGGAAAAAGCATGCGTG 60.670 52.381 13.01 0.09 0.00 5.34
556 569 0.603065 GGGAAGGAAAAAGCATGCGT 59.397 50.000 13.01 6.07 0.00 5.24
557 570 0.890683 AGGGAAGGAAAAAGCATGCG 59.109 50.000 13.01 0.00 0.00 4.73
558 571 3.356290 TCTAGGGAAGGAAAAAGCATGC 58.644 45.455 10.51 10.51 0.00 4.06
559 572 3.379688 GCTCTAGGGAAGGAAAAAGCATG 59.620 47.826 0.00 0.00 0.00 4.06
560 573 3.625853 GCTCTAGGGAAGGAAAAAGCAT 58.374 45.455 0.00 0.00 0.00 3.79
561 574 2.290960 GGCTCTAGGGAAGGAAAAAGCA 60.291 50.000 0.00 0.00 0.00 3.91
562 575 2.370349 GGCTCTAGGGAAGGAAAAAGC 58.630 52.381 0.00 0.00 0.00 3.51
563 576 2.357257 GGGGCTCTAGGGAAGGAAAAAG 60.357 54.545 0.00 0.00 0.00 2.27
564 577 1.639108 GGGGCTCTAGGGAAGGAAAAA 59.361 52.381 0.00 0.00 0.00 1.94
565 578 1.296002 GGGGCTCTAGGGAAGGAAAA 58.704 55.000 0.00 0.00 0.00 2.29
566 579 0.623617 GGGGGCTCTAGGGAAGGAAA 60.624 60.000 0.00 0.00 0.00 3.13
567 580 1.004361 GGGGGCTCTAGGGAAGGAA 59.996 63.158 0.00 0.00 0.00 3.36
568 581 2.703430 GGGGGCTCTAGGGAAGGA 59.297 66.667 0.00 0.00 0.00 3.36
569 582 2.844839 CGGGGGCTCTAGGGAAGG 60.845 72.222 0.00 0.00 0.00 3.46
570 583 1.834822 CTCGGGGGCTCTAGGGAAG 60.835 68.421 0.00 0.00 0.00 3.46
571 584 2.282446 CTCGGGGGCTCTAGGGAA 59.718 66.667 0.00 0.00 0.00 3.97
572 585 4.541648 GCTCGGGGGCTCTAGGGA 62.542 72.222 0.00 0.00 0.00 4.20
594 607 2.509336 CGAACCCAGCGCACTAGG 60.509 66.667 11.47 6.84 0.00 3.02
595 608 2.509336 CCGAACCCAGCGCACTAG 60.509 66.667 11.47 0.00 0.00 2.57
596 609 3.291101 GACCGAACCCAGCGCACTA 62.291 63.158 11.47 0.00 0.00 2.74
597 610 4.681978 GACCGAACCCAGCGCACT 62.682 66.667 11.47 0.00 0.00 4.40
598 611 4.681978 AGACCGAACCCAGCGCAC 62.682 66.667 11.47 0.00 0.00 5.34
599 612 4.680237 CAGACCGAACCCAGCGCA 62.680 66.667 11.47 0.00 0.00 6.09
601 614 4.760047 CCCAGACCGAACCCAGCG 62.760 72.222 0.00 0.00 0.00 5.18
602 615 2.595009 GATCCCAGACCGAACCCAGC 62.595 65.000 0.00 0.00 0.00 4.85
603 616 1.522569 GATCCCAGACCGAACCCAG 59.477 63.158 0.00 0.00 0.00 4.45
604 617 2.355986 CGATCCCAGACCGAACCCA 61.356 63.158 0.00 0.00 0.00 4.51
605 618 2.499685 CGATCCCAGACCGAACCC 59.500 66.667 0.00 0.00 0.00 4.11
606 619 2.202892 GCGATCCCAGACCGAACC 60.203 66.667 0.00 0.00 0.00 3.62
607 620 1.144057 ATGCGATCCCAGACCGAAC 59.856 57.895 0.00 0.00 0.00 3.95
608 621 1.143838 CATGCGATCCCAGACCGAA 59.856 57.895 0.00 0.00 0.00 4.30
609 622 2.796193 CCATGCGATCCCAGACCGA 61.796 63.158 0.00 0.00 0.00 4.69
610 623 2.280389 CCATGCGATCCCAGACCG 60.280 66.667 0.00 0.00 0.00 4.79
611 624 2.592861 GCCATGCGATCCCAGACC 60.593 66.667 0.00 0.00 0.00 3.85
612 625 2.592861 GGCCATGCGATCCCAGAC 60.593 66.667 0.00 0.00 0.00 3.51
613 626 3.877450 GGGCCATGCGATCCCAGA 61.877 66.667 4.39 0.00 39.82 3.86
614 627 4.962836 GGGGCCATGCGATCCCAG 62.963 72.222 4.39 0.00 41.85 4.45
616 629 4.521292 TTGGGGCCATGCGATCCC 62.521 66.667 4.39 0.00 39.81 3.85
617 630 2.057408 TTTTGGGGCCATGCGATCC 61.057 57.895 4.39 0.00 0.00 3.36
618 631 1.141665 GTTTTGGGGCCATGCGATC 59.858 57.895 4.39 0.00 0.00 3.69
619 632 2.709883 CGTTTTGGGGCCATGCGAT 61.710 57.895 4.39 0.00 0.00 4.58
620 633 3.369400 CGTTTTGGGGCCATGCGA 61.369 61.111 4.39 0.00 0.00 5.10
621 634 4.433877 CCGTTTTGGGGCCATGCG 62.434 66.667 4.39 1.87 0.00 4.73
641 654 2.100216 CCGAAATTTGCCGGCTCG 59.900 61.111 29.70 26.24 39.22 5.03
646 659 0.444651 TAAGACGCCGAAATTTGCCG 59.555 50.000 0.00 0.00 0.00 5.69
647 660 1.789054 CGTAAGACGCCGAAATTTGCC 60.789 52.381 0.00 0.00 43.02 4.52
648 661 1.520368 CGTAAGACGCCGAAATTTGC 58.480 50.000 0.00 0.00 43.02 3.68
649 662 1.727880 TCCGTAAGACGCCGAAATTTG 59.272 47.619 0.00 0.00 40.91 2.32
650 663 1.728425 GTCCGTAAGACGCCGAAATTT 59.272 47.619 0.00 0.00 40.91 1.82
651 664 1.353076 GTCCGTAAGACGCCGAAATT 58.647 50.000 0.00 0.00 40.91 1.82
652 665 3.040409 GTCCGTAAGACGCCGAAAT 57.960 52.632 0.00 0.00 40.91 2.17
653 666 4.557942 GTCCGTAAGACGCCGAAA 57.442 55.556 0.00 0.00 40.91 3.46
660 673 1.513586 CCAGTCGCGTCCGTAAGAC 60.514 63.158 5.77 0.00 42.54 3.01
661 674 2.693762 CCCAGTCGCGTCCGTAAGA 61.694 63.158 5.77 0.00 43.02 2.10
662 675 2.202570 CCCAGTCGCGTCCGTAAG 60.203 66.667 5.77 0.00 35.54 2.34
663 676 2.086251 AAACCCAGTCGCGTCCGTAA 62.086 55.000 5.77 0.00 35.54 3.18
664 677 2.086251 AAAACCCAGTCGCGTCCGTA 62.086 55.000 5.77 0.00 35.54 4.02
665 678 2.928642 AAAAACCCAGTCGCGTCCGT 62.929 55.000 5.77 0.00 35.54 4.69
666 679 2.248835 AAAAACCCAGTCGCGTCCG 61.249 57.895 5.77 0.00 0.00 4.79
667 680 3.740513 AAAAACCCAGTCGCGTCC 58.259 55.556 5.77 0.00 0.00 4.79
702 715 2.033602 CCTCCGGGGCGACTTTTT 59.966 61.111 0.00 0.00 0.00 1.94
723 736 2.624674 ATATCCAGCCACGCCCCAAC 62.625 60.000 0.00 0.00 0.00 3.77
724 737 2.382770 ATATCCAGCCACGCCCCAA 61.383 57.895 0.00 0.00 0.00 4.12
725 738 2.772191 ATATCCAGCCACGCCCCA 60.772 61.111 0.00 0.00 0.00 4.96
726 739 2.281761 CATATCCAGCCACGCCCC 60.282 66.667 0.00 0.00 0.00 5.80
727 740 2.980233 GCATATCCAGCCACGCCC 60.980 66.667 0.00 0.00 0.00 6.13
728 741 1.963338 GAGCATATCCAGCCACGCC 60.963 63.158 0.00 0.00 0.00 5.68
729 742 0.533755 AAGAGCATATCCAGCCACGC 60.534 55.000 0.00 0.00 0.00 5.34
730 743 2.036475 AGTAAGAGCATATCCAGCCACG 59.964 50.000 0.00 0.00 0.00 4.94
731 744 3.760580 AGTAAGAGCATATCCAGCCAC 57.239 47.619 0.00 0.00 0.00 5.01
732 745 4.483950 ACTAGTAAGAGCATATCCAGCCA 58.516 43.478 0.00 0.00 0.00 4.75
733 746 5.126384 CCTACTAGTAAGAGCATATCCAGCC 59.874 48.000 3.76 0.00 0.00 4.85
734 747 5.126384 CCCTACTAGTAAGAGCATATCCAGC 59.874 48.000 3.76 0.00 0.00 4.85
735 748 6.249951 ACCCTACTAGTAAGAGCATATCCAG 58.750 44.000 3.76 0.00 0.00 3.86
736 749 6.215515 ACCCTACTAGTAAGAGCATATCCA 57.784 41.667 3.76 0.00 0.00 3.41
737 750 7.541916 AAACCCTACTAGTAAGAGCATATCC 57.458 40.000 3.76 0.00 0.00 2.59
739 752 9.091220 CCTAAAACCCTACTAGTAAGAGCATAT 57.909 37.037 3.76 0.00 0.00 1.78
740 753 7.508296 CCCTAAAACCCTACTAGTAAGAGCATA 59.492 40.741 3.76 0.00 0.00 3.14
741 754 6.326843 CCCTAAAACCCTACTAGTAAGAGCAT 59.673 42.308 3.76 0.00 0.00 3.79
742 755 5.659971 CCCTAAAACCCTACTAGTAAGAGCA 59.340 44.000 3.76 0.00 0.00 4.26
743 756 5.660417 ACCCTAAAACCCTACTAGTAAGAGC 59.340 44.000 3.76 0.00 0.00 4.09
744 757 6.666980 ACACCCTAAAACCCTACTAGTAAGAG 59.333 42.308 3.76 0.00 0.00 2.85
745 758 6.438425 CACACCCTAAAACCCTACTAGTAAGA 59.562 42.308 3.76 0.00 0.00 2.10
746 759 6.212187 ACACACCCTAAAACCCTACTAGTAAG 59.788 42.308 3.76 0.00 0.00 2.34
747 760 6.084060 ACACACCCTAAAACCCTACTAGTAA 58.916 40.000 3.76 0.00 0.00 2.24
748 761 5.654370 ACACACCCTAAAACCCTACTAGTA 58.346 41.667 1.89 1.89 0.00 1.82
749 762 4.496540 ACACACCCTAAAACCCTACTAGT 58.503 43.478 0.00 0.00 0.00 2.57
750 763 5.494390 AACACACCCTAAAACCCTACTAG 57.506 43.478 0.00 0.00 0.00 2.57
751 764 5.456474 CCAAACACACCCTAAAACCCTACTA 60.456 44.000 0.00 0.00 0.00 1.82
752 765 4.466827 CAAACACACCCTAAAACCCTACT 58.533 43.478 0.00 0.00 0.00 2.57
753 766 3.570975 CCAAACACACCCTAAAACCCTAC 59.429 47.826 0.00 0.00 0.00 3.18
754 767 3.462579 TCCAAACACACCCTAAAACCCTA 59.537 43.478 0.00 0.00 0.00 3.53
755 768 2.245287 TCCAAACACACCCTAAAACCCT 59.755 45.455 0.00 0.00 0.00 4.34
756 769 2.668625 TCCAAACACACCCTAAAACCC 58.331 47.619 0.00 0.00 0.00 4.11
757 770 4.100344 ACAATCCAAACACACCCTAAAACC 59.900 41.667 0.00 0.00 0.00 3.27
758 771 5.047188 CACAATCCAAACACACCCTAAAAC 58.953 41.667 0.00 0.00 0.00 2.43
759 772 4.100189 CCACAATCCAAACACACCCTAAAA 59.900 41.667 0.00 0.00 0.00 1.52
760 773 3.639094 CCACAATCCAAACACACCCTAAA 59.361 43.478 0.00 0.00 0.00 1.85
761 774 3.226777 CCACAATCCAAACACACCCTAA 58.773 45.455 0.00 0.00 0.00 2.69
762 775 2.870175 CCACAATCCAAACACACCCTA 58.130 47.619 0.00 0.00 0.00 3.53
763 776 1.703411 CCACAATCCAAACACACCCT 58.297 50.000 0.00 0.00 0.00 4.34
764 777 0.033366 GCCACAATCCAAACACACCC 59.967 55.000 0.00 0.00 0.00 4.61
765 778 0.033366 GGCCACAATCCAAACACACC 59.967 55.000 0.00 0.00 0.00 4.16
766 779 0.749649 TGGCCACAATCCAAACACAC 59.250 50.000 0.00 0.00 0.00 3.82
767 780 1.489481 TTGGCCACAATCCAAACACA 58.511 45.000 3.88 0.00 40.35 3.72
768 781 2.158971 ACTTTGGCCACAATCCAAACAC 60.159 45.455 3.88 0.00 45.60 3.32
769 782 2.114616 ACTTTGGCCACAATCCAAACA 58.885 42.857 3.88 0.00 45.60 2.83
770 783 2.158971 ACACTTTGGCCACAATCCAAAC 60.159 45.455 3.88 0.00 45.60 2.93
772 785 1.786937 ACACTTTGGCCACAATCCAA 58.213 45.000 3.88 0.00 41.47 3.53
773 786 2.666272 TACACTTTGGCCACAATCCA 57.334 45.000 3.88 0.00 36.29 3.41
774 787 4.535526 AAATACACTTTGGCCACAATCC 57.464 40.909 3.88 0.00 36.29 3.01
775 788 7.319646 TGATAAAATACACTTTGGCCACAATC 58.680 34.615 3.88 0.00 36.29 2.67
776 789 7.238486 TGATAAAATACACTTTGGCCACAAT 57.762 32.000 3.88 0.00 36.29 2.71
777 790 6.656632 TGATAAAATACACTTTGGCCACAA 57.343 33.333 3.88 2.15 34.07 3.33
778 791 6.656632 TTGATAAAATACACTTTGGCCACA 57.343 33.333 3.88 0.00 0.00 4.17
779 792 7.954788 TTTTGATAAAATACACTTTGGCCAC 57.045 32.000 3.88 0.00 0.00 5.01
780 793 9.566432 AAATTTTGATAAAATACACTTTGGCCA 57.434 25.926 0.00 0.00 40.05 5.36
800 813 9.492973 CCAATCTTAAGTCATGACCAAAATTTT 57.507 29.630 22.21 10.46 0.00 1.82
801 814 8.650490 ACCAATCTTAAGTCATGACCAAAATTT 58.350 29.630 22.21 11.15 0.00 1.82
802 815 8.193953 ACCAATCTTAAGTCATGACCAAAATT 57.806 30.769 22.21 11.92 0.00 1.82
803 816 7.671398 AGACCAATCTTAAGTCATGACCAAAAT 59.329 33.333 22.21 6.52 32.82 1.82
804 817 7.004086 AGACCAATCTTAAGTCATGACCAAAA 58.996 34.615 22.21 12.61 32.82 2.44
805 818 6.542821 AGACCAATCTTAAGTCATGACCAAA 58.457 36.000 22.21 14.97 32.82 3.28
806 819 6.126863 AGACCAATCTTAAGTCATGACCAA 57.873 37.500 22.21 15.00 32.82 3.67
807 820 5.762179 AGACCAATCTTAAGTCATGACCA 57.238 39.130 22.21 7.94 32.82 4.02
808 821 6.431234 ACAAAGACCAATCTTAAGTCATGACC 59.569 38.462 22.21 4.75 44.82 4.02
809 822 7.440523 ACAAAGACCAATCTTAAGTCATGAC 57.559 36.000 18.47 18.47 44.82 3.06
810 823 8.352201 CAAACAAAGACCAATCTTAAGTCATGA 58.648 33.333 1.63 0.00 44.82 3.07
811 824 8.352201 TCAAACAAAGACCAATCTTAAGTCATG 58.648 33.333 1.63 0.66 44.82 3.07
812 825 8.463930 TCAAACAAAGACCAATCTTAAGTCAT 57.536 30.769 1.63 0.00 44.82 3.06
813 826 7.873719 TCAAACAAAGACCAATCTTAAGTCA 57.126 32.000 1.63 0.00 44.82 3.41
814 827 9.185192 CATTCAAACAAAGACCAATCTTAAGTC 57.815 33.333 1.63 0.00 44.82 3.01
815 828 8.143835 CCATTCAAACAAAGACCAATCTTAAGT 58.856 33.333 1.63 0.00 44.82 2.24
816 829 8.143835 ACCATTCAAACAAAGACCAATCTTAAG 58.856 33.333 0.00 0.00 44.82 1.85
817 830 8.017418 ACCATTCAAACAAAGACCAATCTTAA 57.983 30.769 0.00 0.00 44.82 1.85
818 831 7.595819 ACCATTCAAACAAAGACCAATCTTA 57.404 32.000 0.00 0.00 44.82 2.10
820 833 6.127083 ACAACCATTCAAACAAAGACCAATCT 60.127 34.615 0.00 0.00 36.42 2.40
821 834 6.048509 ACAACCATTCAAACAAAGACCAATC 58.951 36.000 0.00 0.00 0.00 2.67
822 835 5.988287 ACAACCATTCAAACAAAGACCAAT 58.012 33.333 0.00 0.00 0.00 3.16
823 836 5.047021 TGACAACCATTCAAACAAAGACCAA 60.047 36.000 0.00 0.00 0.00 3.67
824 837 4.464244 TGACAACCATTCAAACAAAGACCA 59.536 37.500 0.00 0.00 0.00 4.02
825 838 5.004922 TGACAACCATTCAAACAAAGACC 57.995 39.130 0.00 0.00 0.00 3.85
826 839 7.538303 AATTGACAACCATTCAAACAAAGAC 57.462 32.000 0.00 0.00 36.57 3.01
827 840 8.558973 AAAATTGACAACCATTCAAACAAAGA 57.441 26.923 0.00 0.00 36.57 2.52
851 864 9.456147 TGGCTAGAGTTTATTAACATGCTAAAA 57.544 29.630 0.00 0.00 36.70 1.52
852 865 9.456147 TTGGCTAGAGTTTATTAACATGCTAAA 57.544 29.630 0.00 0.00 36.70 1.85
853 866 9.627123 ATTGGCTAGAGTTTATTAACATGCTAA 57.373 29.630 0.00 0.00 36.70 3.09
854 867 9.627123 AATTGGCTAGAGTTTATTAACATGCTA 57.373 29.630 0.00 0.00 36.70 3.49
855 868 8.525290 AATTGGCTAGAGTTTATTAACATGCT 57.475 30.769 0.00 0.00 36.70 3.79
856 869 8.405531 TGAATTGGCTAGAGTTTATTAACATGC 58.594 33.333 0.00 0.00 36.70 4.06
884 897 7.326454 TGATTTGGTCAACATTGTCAGAAAAA 58.674 30.769 0.00 0.00 32.78 1.94
885 898 6.871844 TGATTTGGTCAACATTGTCAGAAAA 58.128 32.000 0.00 0.00 32.78 2.29
886 899 6.462552 TGATTTGGTCAACATTGTCAGAAA 57.537 33.333 0.00 0.00 32.78 2.52
887 900 6.448852 CATGATTTGGTCAACATTGTCAGAA 58.551 36.000 0.00 0.00 40.97 3.02
888 901 5.047872 CCATGATTTGGTCAACATTGTCAGA 60.048 40.000 0.00 0.00 40.97 3.27
889 902 5.165676 CCATGATTTGGTCAACATTGTCAG 58.834 41.667 0.00 0.00 40.97 3.51
890 903 4.021280 CCCATGATTTGGTCAACATTGTCA 60.021 41.667 0.00 0.00 44.83 3.58
891 904 4.497300 CCCATGATTTGGTCAACATTGTC 58.503 43.478 0.00 0.00 44.83 3.18
892 905 3.306919 GCCCATGATTTGGTCAACATTGT 60.307 43.478 0.00 0.00 44.83 2.71
893 906 3.264104 GCCCATGATTTGGTCAACATTG 58.736 45.455 0.00 0.00 44.83 2.82
894 907 2.905085 TGCCCATGATTTGGTCAACATT 59.095 40.909 0.00 0.00 44.83 2.71
895 908 2.538222 TGCCCATGATTTGGTCAACAT 58.462 42.857 0.00 0.00 44.83 2.71
896 909 2.006805 TGCCCATGATTTGGTCAACA 57.993 45.000 0.00 0.00 44.83 3.33
898 911 1.622811 GGTTGCCCATGATTTGGTCAA 59.377 47.619 0.00 0.00 40.95 3.18
899 912 1.265236 GGTTGCCCATGATTTGGTCA 58.735 50.000 0.00 0.00 44.83 4.02
900 913 1.265236 TGGTTGCCCATGATTTGGTC 58.735 50.000 0.00 0.00 44.83 4.02
901 914 1.727062 TTGGTTGCCCATGATTTGGT 58.273 45.000 0.00 0.00 44.83 3.67
902 915 2.813172 GTTTTGGTTGCCCATGATTTGG 59.187 45.455 0.00 0.00 46.00 3.28
903 916 2.813172 GGTTTTGGTTGCCCATGATTTG 59.187 45.455 0.00 0.00 41.49 2.32
904 917 2.710471 AGGTTTTGGTTGCCCATGATTT 59.290 40.909 0.00 0.00 41.49 2.17
905 918 2.302733 GAGGTTTTGGTTGCCCATGATT 59.697 45.455 0.00 0.00 41.49 2.57
906 919 1.901833 GAGGTTTTGGTTGCCCATGAT 59.098 47.619 0.00 0.00 41.49 2.45
907 920 1.337118 GAGGTTTTGGTTGCCCATGA 58.663 50.000 0.00 0.00 41.49 3.07
908 921 0.038343 CGAGGTTTTGGTTGCCCATG 60.038 55.000 0.00 0.00 41.49 3.66
909 922 0.469144 ACGAGGTTTTGGTTGCCCAT 60.469 50.000 0.00 0.00 41.49 4.00
910 923 1.076632 ACGAGGTTTTGGTTGCCCA 60.077 52.632 0.00 0.00 39.65 5.36
911 924 1.104577 TCACGAGGTTTTGGTTGCCC 61.105 55.000 0.00 0.00 0.00 5.36
912 925 0.030235 GTCACGAGGTTTTGGTTGCC 59.970 55.000 0.00 0.00 0.00 4.52
913 926 0.736053 TGTCACGAGGTTTTGGTTGC 59.264 50.000 0.00 0.00 0.00 4.17
914 927 1.740585 TGTGTCACGAGGTTTTGGTTG 59.259 47.619 0.00 0.00 0.00 3.77
915 928 2.116827 TGTGTCACGAGGTTTTGGTT 57.883 45.000 0.00 0.00 0.00 3.67
916 929 2.116827 TTGTGTCACGAGGTTTTGGT 57.883 45.000 0.00 0.00 0.00 3.67
917 930 2.478879 GGTTTGTGTCACGAGGTTTTGG 60.479 50.000 0.00 0.00 0.00 3.28
918 931 2.162608 TGGTTTGTGTCACGAGGTTTTG 59.837 45.455 0.00 0.00 0.00 2.44
919 932 2.438411 TGGTTTGTGTCACGAGGTTTT 58.562 42.857 0.00 0.00 0.00 2.43
920 933 2.116827 TGGTTTGTGTCACGAGGTTT 57.883 45.000 0.00 0.00 0.00 3.27
921 934 2.116827 TTGGTTTGTGTCACGAGGTT 57.883 45.000 0.00 0.00 0.00 3.50
922 935 1.741145 GTTTGGTTTGTGTCACGAGGT 59.259 47.619 0.00 0.00 0.00 3.85
923 936 1.740585 TGTTTGGTTTGTGTCACGAGG 59.259 47.619 0.00 0.00 0.00 4.63
924 937 2.160615 TGTGTTTGGTTTGTGTCACGAG 59.839 45.455 0.00 0.00 0.00 4.18
925 938 2.095668 GTGTGTTTGGTTTGTGTCACGA 60.096 45.455 0.00 0.00 0.00 4.35
926 939 2.246789 GTGTGTTTGGTTTGTGTCACG 58.753 47.619 0.00 0.00 0.00 4.35
927 940 2.230266 AGGTGTGTTTGGTTTGTGTCAC 59.770 45.455 0.00 0.00 0.00 3.67
928 941 2.520069 AGGTGTGTTTGGTTTGTGTCA 58.480 42.857 0.00 0.00 0.00 3.58
929 942 3.586100 AAGGTGTGTTTGGTTTGTGTC 57.414 42.857 0.00 0.00 0.00 3.67
930 943 4.337145 TCTAAGGTGTGTTTGGTTTGTGT 58.663 39.130 0.00 0.00 0.00 3.72
931 944 4.733523 GCTCTAAGGTGTGTTTGGTTTGTG 60.734 45.833 0.00 0.00 0.00 3.33
932 945 3.380320 GCTCTAAGGTGTGTTTGGTTTGT 59.620 43.478 0.00 0.00 0.00 2.83
933 946 3.548014 CGCTCTAAGGTGTGTTTGGTTTG 60.548 47.826 0.00 0.00 0.00 2.93
934 947 2.616842 CGCTCTAAGGTGTGTTTGGTTT 59.383 45.455 0.00 0.00 0.00 3.27
935 948 2.218603 CGCTCTAAGGTGTGTTTGGTT 58.781 47.619 0.00 0.00 0.00 3.67
936 949 1.140252 ACGCTCTAAGGTGTGTTTGGT 59.860 47.619 0.00 0.00 0.00 3.67
937 950 1.798813 GACGCTCTAAGGTGTGTTTGG 59.201 52.381 0.00 0.00 31.14 3.28
938 951 1.798813 GGACGCTCTAAGGTGTGTTTG 59.201 52.381 0.00 0.00 31.14 2.93
939 952 1.414919 TGGACGCTCTAAGGTGTGTTT 59.585 47.619 0.00 0.00 31.14 2.83
940 953 1.045407 TGGACGCTCTAAGGTGTGTT 58.955 50.000 0.00 0.00 31.14 3.32
941 954 1.204941 GATGGACGCTCTAAGGTGTGT 59.795 52.381 0.00 0.00 33.23 3.72
942 955 1.471676 GGATGGACGCTCTAAGGTGTG 60.472 57.143 0.00 0.00 0.00 3.82
943 956 0.824759 GGATGGACGCTCTAAGGTGT 59.175 55.000 0.00 0.00 0.00 4.16
944 957 0.105039 GGGATGGACGCTCTAAGGTG 59.895 60.000 0.00 0.00 0.00 4.00
945 958 1.049289 GGGGATGGACGCTCTAAGGT 61.049 60.000 0.00 0.00 0.00 3.50
946 959 1.749033 GGGGATGGACGCTCTAAGG 59.251 63.158 0.00 0.00 0.00 2.69
947 960 1.364171 CGGGGATGGACGCTCTAAG 59.636 63.158 0.00 0.00 0.00 2.18
1383 1459 2.159043 CCGATTGACCAGCAGTATGAGT 60.159 50.000 0.00 0.00 39.69 3.41
1480 1563 8.677148 AACAATAATTCGTACCAATAGCTCAT 57.323 30.769 0.00 0.00 0.00 2.90
1592 1679 6.378710 AAGAAGCAAAACTGAAAGAGGTAC 57.621 37.500 0.00 0.00 37.43 3.34
1593 1680 7.936847 TCATAAGAAGCAAAACTGAAAGAGGTA 59.063 33.333 0.00 0.00 37.43 3.08
1594 1681 6.772716 TCATAAGAAGCAAAACTGAAAGAGGT 59.227 34.615 0.00 0.00 37.43 3.85
1595 1682 7.080724 GTCATAAGAAGCAAAACTGAAAGAGG 58.919 38.462 0.00 0.00 37.43 3.69
1598 1685 6.638468 GTGGTCATAAGAAGCAAAACTGAAAG 59.362 38.462 0.00 0.00 42.29 2.62
1717 2478 0.740737 GCTTCGGCCATTGCATTACT 59.259 50.000 2.24 0.00 40.13 2.24
1731 2492 6.030548 TGAGATGATTTATCCTAGGCTTCG 57.969 41.667 2.96 0.00 36.40 3.79
2023 2785 8.677300 TGATATAAGATTGCAAAACTGAACTCC 58.323 33.333 1.71 0.00 0.00 3.85
2295 3058 4.394920 GCTTACCAGCTACAATGTTAAGCA 59.605 41.667 16.04 0.00 43.51 3.91
2368 3134 0.746563 CTCTCGACTCTTCCTCGCCT 60.747 60.000 0.00 0.00 0.00 5.52
2761 3601 6.817641 AGACAGAATGCATTAGAAGAGACAAG 59.182 38.462 12.97 0.00 42.53 3.16
2981 3823 3.483808 TGGTGACAATGACACAGCTTA 57.516 42.857 16.57 0.00 39.65 3.09
3381 4726 5.082059 CGATCTTGCTGTACACAATTCAAC 58.918 41.667 10.10 3.20 0.00 3.18
3465 4811 6.458210 AGCAACCTATTTTTGGTTTCAGATG 58.542 36.000 0.00 0.00 44.54 2.90
3502 4853 4.201851 CCATTGGATGAAAACTAGCTCACG 60.202 45.833 0.00 0.00 0.00 4.35
3830 5197 4.378046 GCAATTTTTCAAAGGCTGATGCAG 60.378 41.667 0.00 0.00 41.91 4.41
3880 5247 8.971073 GCATTGCATAAGGGTAAAGGAATATAT 58.029 33.333 3.15 0.00 0.00 0.86
3881 5248 7.947332 TGCATTGCATAAGGGTAAAGGAATATA 59.053 33.333 7.38 0.00 31.71 0.86
4035 5411 8.460629 GCAAAAGAAACAAATTAATTTCGTTGC 58.539 29.630 23.91 23.91 44.23 4.17
4307 5683 2.564771 TGCACAGAAGTCTGAAACTGG 58.435 47.619 15.15 0.00 46.59 4.00
4620 6118 6.427242 GGAAGTTAAGTGAGTAAAGGAACCAG 59.573 42.308 0.00 0.00 0.00 4.00
4666 6164 4.289238 AGATCCTCATTCATCATCTGCC 57.711 45.455 0.00 0.00 0.00 4.85
5268 7412 4.952957 TCCGAGTCTTCATTCTCTGAATCT 59.047 41.667 0.00 0.00 42.87 2.40
5317 7462 1.338020 CGCTGCCCTTTGATTTATCCC 59.662 52.381 0.00 0.00 0.00 3.85
5865 8013 9.899661 TGCATAAATAGTTTATACAGGTCAAGT 57.100 29.630 0.00 0.00 34.22 3.16
5874 8022 7.170998 ACGTGAGCCTGCATAAATAGTTTATAC 59.829 37.037 0.00 0.00 34.22 1.47
6093 8245 5.098211 GCAGAAGAAAACATTACAGCATCC 58.902 41.667 0.00 0.00 0.00 3.51
6484 9498 3.783082 CCCCTTAGTCTCTTTCTTCCCAT 59.217 47.826 0.00 0.00 0.00 4.00
6485 9499 3.182152 CCCCTTAGTCTCTTTCTTCCCA 58.818 50.000 0.00 0.00 0.00 4.37
6503 9517 0.324368 GAGGGAATCCAAACACCCCC 60.324 60.000 0.09 0.00 42.97 5.40
6504 9518 3.283020 GAGGGAATCCAAACACCCC 57.717 57.895 0.09 0.00 42.97 4.95
6555 9569 1.379527 ACACTATTTTAGCCCGCAGC 58.620 50.000 0.00 0.00 44.25 5.25
6556 9570 3.793559 ACTACACTATTTTAGCCCGCAG 58.206 45.455 0.00 0.00 0.00 5.18
6557 9571 3.899052 ACTACACTATTTTAGCCCGCA 57.101 42.857 0.00 0.00 0.00 5.69
6558 9572 3.311596 CCAACTACACTATTTTAGCCCGC 59.688 47.826 0.00 0.00 0.00 6.13
6559 9573 4.761975 TCCAACTACACTATTTTAGCCCG 58.238 43.478 0.00 0.00 0.00 6.13
6560 9574 6.657966 ACTTTCCAACTACACTATTTTAGCCC 59.342 38.462 0.00 0.00 0.00 5.19
6561 9575 7.683437 ACTTTCCAACTACACTATTTTAGCC 57.317 36.000 0.00 0.00 0.00 3.93
6562 9576 8.880750 CCTACTTTCCAACTACACTATTTTAGC 58.119 37.037 0.00 0.00 0.00 3.09
6563 9577 8.880750 GCCTACTTTCCAACTACACTATTTTAG 58.119 37.037 0.00 0.00 0.00 1.85
6564 9578 8.377034 TGCCTACTTTCCAACTACACTATTTTA 58.623 33.333 0.00 0.00 0.00 1.52
6565 9579 7.174426 GTGCCTACTTTCCAACTACACTATTTT 59.826 37.037 0.00 0.00 0.00 1.82
6567 9581 6.013639 AGTGCCTACTTTCCAACTACACTATT 60.014 38.462 0.00 0.00 34.30 1.73
6568 9582 5.484290 AGTGCCTACTTTCCAACTACACTAT 59.516 40.000 0.00 0.00 34.30 2.12
6570 9584 3.646637 AGTGCCTACTTTCCAACTACACT 59.353 43.478 0.00 0.00 31.66 3.55
6571 9585 3.995048 GAGTGCCTACTTTCCAACTACAC 59.005 47.826 0.00 0.00 37.25 2.90
6572 9586 3.007614 GGAGTGCCTACTTTCCAACTACA 59.992 47.826 0.00 0.00 37.25 2.74
6574 9588 2.232941 CGGAGTGCCTACTTTCCAACTA 59.767 50.000 0.00 0.00 37.25 2.24
6575 9589 1.002087 CGGAGTGCCTACTTTCCAACT 59.998 52.381 0.00 0.00 37.25 3.16
6577 9591 0.321298 GCGGAGTGCCTACTTTCCAA 60.321 55.000 0.00 0.00 37.25 3.53
6578 9592 1.295423 GCGGAGTGCCTACTTTCCA 59.705 57.895 0.00 0.00 37.25 3.53
6580 9594 0.246635 TCTGCGGAGTGCCTACTTTC 59.753 55.000 3.10 0.00 45.60 2.62
6581 9595 0.905357 ATCTGCGGAGTGCCTACTTT 59.095 50.000 3.10 0.00 45.60 2.66
6582 9596 0.461961 GATCTGCGGAGTGCCTACTT 59.538 55.000 3.10 0.00 45.60 2.24
6583 9597 1.395826 GGATCTGCGGAGTGCCTACT 61.396 60.000 3.10 0.00 45.60 2.57
6584 9598 1.068250 GGATCTGCGGAGTGCCTAC 59.932 63.158 3.10 0.00 45.60 3.18
6585 9599 1.075970 AGGATCTGCGGAGTGCCTA 60.076 57.895 16.01 0.00 45.60 3.93
6586 9600 2.364842 AGGATCTGCGGAGTGCCT 60.365 61.111 12.87 12.87 45.60 4.75
6587 9601 1.676678 TACAGGATCTGCGGAGTGCC 61.677 60.000 3.10 6.77 45.60 5.01
6588 9602 0.175760 TTACAGGATCTGCGGAGTGC 59.824 55.000 3.10 0.00 46.70 4.40
6589 9603 2.898729 ATTACAGGATCTGCGGAGTG 57.101 50.000 3.10 0.93 34.37 3.51
6590 9604 3.034635 AGAATTACAGGATCTGCGGAGT 58.965 45.455 3.10 0.00 34.37 3.85
6591 9605 3.388308 CAGAATTACAGGATCTGCGGAG 58.612 50.000 0.00 0.00 34.72 4.63
6592 9606 3.459232 CAGAATTACAGGATCTGCGGA 57.541 47.619 0.00 0.00 34.72 5.54
6596 9610 3.388308 CTCCGCAGAATTACAGGATCTG 58.612 50.000 0.00 0.00 42.70 2.90
6597 9611 2.224161 GCTCCGCAGAATTACAGGATCT 60.224 50.000 0.00 0.00 0.00 2.75
6598 9612 2.139118 GCTCCGCAGAATTACAGGATC 58.861 52.381 0.00 0.00 0.00 3.36
6599 9613 1.202698 GGCTCCGCAGAATTACAGGAT 60.203 52.381 0.00 0.00 0.00 3.24
6600 9614 0.178068 GGCTCCGCAGAATTACAGGA 59.822 55.000 0.00 0.00 0.00 3.86
6601 9615 1.154205 CGGCTCCGCAGAATTACAGG 61.154 60.000 0.00 0.00 0.00 4.00
6602 9616 1.154205 CCGGCTCCGCAGAATTACAG 61.154 60.000 2.18 0.00 38.24 2.74
6603 9617 1.153449 CCGGCTCCGCAGAATTACA 60.153 57.895 2.18 0.00 38.24 2.41
6604 9618 1.153429 ACCGGCTCCGCAGAATTAC 60.153 57.895 0.00 0.00 38.24 1.89
6605 9619 1.153449 CACCGGCTCCGCAGAATTA 60.153 57.895 0.00 0.00 38.24 1.40
6606 9620 2.436646 CACCGGCTCCGCAGAATT 60.437 61.111 0.00 0.00 38.24 2.17
6607 9621 4.473520 CCACCGGCTCCGCAGAAT 62.474 66.667 0.00 0.00 38.24 2.40
6620 9634 2.266055 CCTGTTCGGCTCTCCACC 59.734 66.667 0.00 0.00 0.00 4.61
6628 9642 6.218295 CTAAACATTTAGGGCCTGTTCGGC 62.218 50.000 18.53 0.00 43.33 5.54
6629 9643 1.834188 AACATTTAGGGCCTGTTCGG 58.166 50.000 18.53 4.35 0.00 4.30
6630 9644 4.007659 ACTAAACATTTAGGGCCTGTTCG 58.992 43.478 18.53 9.70 43.38 3.95
6631 9645 6.178324 ACTACTAAACATTTAGGGCCTGTTC 58.822 40.000 18.53 0.00 43.38 3.18
6632 9646 6.135819 ACTACTAAACATTTAGGGCCTGTT 57.864 37.500 18.53 9.91 43.38 3.16
6633 9647 5.774102 ACTACTAAACATTTAGGGCCTGT 57.226 39.130 18.53 2.67 43.38 4.00
6634 9648 6.099269 TCCTACTACTAAACATTTAGGGCCTG 59.901 42.308 18.53 1.87 43.38 4.85
6635 9649 6.207532 TCCTACTACTAAACATTTAGGGCCT 58.792 40.000 12.58 12.58 43.38 5.19
6636 9650 6.490241 TCCTACTACTAAACATTTAGGGCC 57.510 41.667 14.34 0.00 43.38 5.80
6637 9651 8.045507 AGTTTCCTACTACTAAACATTTAGGGC 58.954 37.037 14.34 0.00 43.38 5.19
6638 9652 9.955102 AAGTTTCCTACTACTAAACATTTAGGG 57.045 33.333 14.34 9.56 39.32 3.53
7105 10124 2.814336 GGAGAAAAGCCACGAACTCAAT 59.186 45.455 0.00 0.00 0.00 2.57
7115 10134 1.673767 AGATGGGAGGAGAAAAGCCA 58.326 50.000 0.00 0.00 0.00 4.75
7208 10227 0.324645 GGTTGGCCATGGGAGTGATT 60.325 55.000 15.13 0.00 34.09 2.57
7241 10260 0.106149 GGTGGCATTAGTCCTACCGG 59.894 60.000 0.00 0.00 0.00 5.28
7257 10276 4.394712 GTCCCCTGCGAGTGGGTG 62.395 72.222 6.98 0.38 43.09 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.