Multiple sequence alignment - TraesCS5A01G265100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G265100 chr5A 100.000 4690 0 0 1 4690 476891369 476896058 0.000000e+00 8661.0
1 TraesCS5A01G265100 chr5B 92.932 2971 143 36 1764 4690 448658226 448661173 0.000000e+00 4261.0
2 TraesCS5A01G265100 chr5B 86.331 1112 73 44 414 1479 448656822 448657900 0.000000e+00 1138.0
3 TraesCS5A01G265100 chr5B 82.237 304 13 13 1469 1764 448657922 448658192 1.700000e-54 224.0
4 TraesCS5A01G265100 chr5D 91.385 2484 137 37 2257 4690 375799260 375801716 0.000000e+00 3330.0
5 TraesCS5A01G265100 chr5D 90.539 761 35 14 1012 1764 375798016 375798747 0.000000e+00 972.0
6 TraesCS5A01G265100 chr5D 88.658 529 42 10 870 1384 331897915 331898439 3.080000e-176 628.0
7 TraesCS5A01G265100 chr5D 92.643 367 19 7 1764 2123 375798780 375799145 5.380000e-144 521.0
8 TraesCS5A01G265100 chr5D 82.036 334 10 15 627 935 375797188 375797496 6.070000e-59 239.0
9 TraesCS5A01G265100 chr5D 94.118 136 8 0 4555 4690 459225132 459224997 1.710000e-49 207.0
10 TraesCS5A01G265100 chr5D 82.305 243 15 9 405 623 375796909 375797147 8.010000e-43 185.0
11 TraesCS5A01G265100 chr5D 96.875 64 2 0 3703 3766 496943315 496943378 1.780000e-19 108.0
12 TraesCS5A01G265100 chr2B 88.454 485 38 8 870 1340 683165097 683165577 1.890000e-158 569.0
13 TraesCS5A01G265100 chr2B 98.438 64 1 0 3703 3766 56928537 56928474 3.840000e-21 113.0
14 TraesCS5A01G265100 chr2B 98.438 64 1 0 3703 3766 787156154 787156091 3.840000e-21 113.0
15 TraesCS5A01G265100 chr7B 88.747 471 42 8 870 1340 545988059 545988518 2.450000e-157 566.0
16 TraesCS5A01G265100 chr7B 94.048 84 3 2 4555 4638 647452024 647452105 4.930000e-25 126.0
17 TraesCS5A01G265100 chr3A 87.835 485 41 7 870 1340 615931789 615932269 1.910000e-153 553.0
18 TraesCS5A01G265100 chr7D 86.304 533 22 23 870 1384 57790398 57789899 2.480000e-147 532.0
19 TraesCS5A01G265100 chr7D 80.396 505 92 6 4169 4668 212808630 212809132 1.230000e-100 377.0
20 TraesCS5A01G265100 chr4D 82.617 512 43 23 870 1340 95179001 95178495 1.210000e-110 411.0
21 TraesCS5A01G265100 chr4D 93.056 72 4 1 3695 3766 446104218 446104148 2.310000e-18 104.0
22 TraesCS5A01G265100 chr4D 91.892 37 3 0 156 192 123425776 123425740 8.000000e-03 52.8
23 TraesCS5A01G265100 chr4D 96.774 31 1 0 153 183 241232784 241232814 8.000000e-03 52.8
24 TraesCS5A01G265100 chr4D 96.774 31 1 0 153 183 241295611 241295641 8.000000e-03 52.8
25 TraesCS5A01G265100 chrUn 98.438 64 1 0 3703 3766 16376044 16375981 3.840000e-21 113.0
26 TraesCS5A01G265100 chrUn 97.015 67 2 0 3702 3768 101160636 101160702 3.840000e-21 113.0
27 TraesCS5A01G265100 chrUn 96.774 31 1 0 153 183 86507942 86507972 8.000000e-03 52.8
28 TraesCS5A01G265100 chrUn 96.774 31 1 0 153 183 260201667 260201697 8.000000e-03 52.8
29 TraesCS5A01G265100 chrUn 96.774 31 1 0 153 183 270907162 270907192 8.000000e-03 52.8
30 TraesCS5A01G265100 chrUn 96.774 31 1 0 153 183 282362626 282362656 8.000000e-03 52.8
31 TraesCS5A01G265100 chr2D 100.000 60 0 0 3703 3762 352792705 352792646 1.380000e-20 111.0
32 TraesCS5A01G265100 chr4A 86.275 51 7 0 153 203 67574616 67574666 6.560000e-04 56.5
33 TraesCS5A01G265100 chr6D 91.892 37 3 0 156 192 236377198 236377162 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G265100 chr5A 476891369 476896058 4689 False 8661.000000 8661 100.000000 1 4690 1 chr5A.!!$F1 4689
1 TraesCS5A01G265100 chr5B 448656822 448661173 4351 False 1874.333333 4261 87.166667 414 4690 3 chr5B.!!$F1 4276
2 TraesCS5A01G265100 chr5D 375796909 375801716 4807 False 1049.400000 3330 87.781600 405 4690 5 chr5D.!!$F3 4285
3 TraesCS5A01G265100 chr5D 331897915 331898439 524 False 628.000000 628 88.658000 870 1384 1 chr5D.!!$F1 514
4 TraesCS5A01G265100 chr7D 212808630 212809132 502 False 377.000000 377 80.396000 4169 4668 1 chr7D.!!$F1 499
5 TraesCS5A01G265100 chr4D 95178495 95179001 506 True 411.000000 411 82.617000 870 1340 1 chr4D.!!$R1 470

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
198 199 0.034089 GGATCCACAAGGGTTGAGGG 60.034 60.0 6.95 0.77 41.13 4.30 F
199 200 0.034089 GATCCACAAGGGTTGAGGGG 60.034 60.0 3.68 0.00 41.13 4.79 F
816 884 0.106894 GCCAAGGGAAGGGATACGAG 59.893 60.0 0.00 0.00 37.60 4.18 F
817 885 0.106894 CCAAGGGAAGGGATACGAGC 59.893 60.0 0.00 0.00 37.60 5.03 F
2712 3435 0.036671 TCTACTCGTCGCAGGACTCA 60.037 55.0 0.00 0.00 41.16 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1941 2584 0.234625 TTGACACGTTTCAGCGATGC 59.765 50.000 4.36 0.00 35.59 3.91 R
1969 2612 0.392998 CCACCACCTACACAGATGGC 60.393 60.000 0.00 0.00 35.49 4.40 R
2712 3435 0.031111 TGAACTCGATGGGGATCCCT 60.031 55.000 30.08 11.98 45.70 4.20 R
2771 3494 8.004585 AGTACGAAAATTCTGAAGTTAAGACG 57.995 34.615 3.30 9.70 0.00 4.18 R
3794 4553 0.805322 CAGCGCTGCCTAGAGAACTG 60.805 60.000 26.68 0.00 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.772687 GAACTCCGGTTCGCCCCC 62.773 72.222 0.00 0.00 41.70 5.40
24 25 4.468689 CTCCGGTTCGCCCCCTTC 62.469 72.222 0.00 0.00 0.00 3.46
28 29 4.735358 GGTTCGCCCCCTTCCACC 62.735 72.222 0.00 0.00 0.00 4.61
29 30 4.735358 GTTCGCCCCCTTCCACCC 62.735 72.222 0.00 0.00 0.00 4.61
35 36 4.693915 CCCCTTCCACCCCTCCCA 62.694 72.222 0.00 0.00 0.00 4.37
36 37 2.534272 CCCTTCCACCCCTCCCAA 60.534 66.667 0.00 0.00 0.00 4.12
37 38 2.763902 CCTTCCACCCCTCCCAAC 59.236 66.667 0.00 0.00 0.00 3.77
38 39 2.351276 CTTCCACCCCTCCCAACG 59.649 66.667 0.00 0.00 0.00 4.10
39 40 3.253838 TTCCACCCCTCCCAACGG 61.254 66.667 0.00 0.00 0.00 4.44
42 43 3.006728 CACCCCTCCCAACGGCTA 61.007 66.667 0.00 0.00 0.00 3.93
43 44 3.007323 ACCCCTCCCAACGGCTAC 61.007 66.667 0.00 0.00 0.00 3.58
44 45 3.793888 CCCCTCCCAACGGCTACC 61.794 72.222 0.00 0.00 0.00 3.18
45 46 2.687566 CCCTCCCAACGGCTACCT 60.688 66.667 0.00 0.00 0.00 3.08
46 47 1.382146 CCCTCCCAACGGCTACCTA 60.382 63.158 0.00 0.00 0.00 3.08
47 48 0.979187 CCCTCCCAACGGCTACCTAA 60.979 60.000 0.00 0.00 0.00 2.69
48 49 0.464452 CCTCCCAACGGCTACCTAAG 59.536 60.000 0.00 0.00 0.00 2.18
49 50 0.464452 CTCCCAACGGCTACCTAAGG 59.536 60.000 0.00 0.00 0.00 2.69
50 51 0.979187 TCCCAACGGCTACCTAAGGG 60.979 60.000 0.00 0.00 38.88 3.95
51 52 1.525442 CCAACGGCTACCTAAGGGG 59.475 63.158 0.00 0.00 41.89 4.79
52 53 1.525442 CAACGGCTACCTAAGGGGG 59.475 63.158 0.00 0.00 40.03 5.40
53 54 2.372890 AACGGCTACCTAAGGGGGC 61.373 63.158 0.00 0.00 40.03 5.80
54 55 2.446036 CGGCTACCTAAGGGGGCT 60.446 66.667 7.92 0.00 40.03 5.19
55 56 2.508751 CGGCTACCTAAGGGGGCTC 61.509 68.421 7.92 0.00 40.03 4.70
56 57 2.148052 GGCTACCTAAGGGGGCTCC 61.148 68.421 0.00 0.00 40.03 4.70
57 58 2.508751 GCTACCTAAGGGGGCTCCG 61.509 68.421 0.00 0.00 41.52 4.63
58 59 1.232216 CTACCTAAGGGGGCTCCGA 59.768 63.158 0.00 0.00 41.52 4.55
59 60 0.178929 CTACCTAAGGGGGCTCCGAT 60.179 60.000 0.00 0.00 41.52 4.18
60 61 0.266753 TACCTAAGGGGGCTCCGATT 59.733 55.000 0.00 0.00 41.52 3.34
61 62 1.054978 ACCTAAGGGGGCTCCGATTC 61.055 60.000 0.00 0.00 41.52 2.52
62 63 1.054406 CCTAAGGGGGCTCCGATTCA 61.054 60.000 0.00 0.00 41.52 2.57
63 64 0.837272 CTAAGGGGGCTCCGATTCAA 59.163 55.000 0.00 0.00 41.52 2.69
64 65 0.544697 TAAGGGGGCTCCGATTCAAC 59.455 55.000 0.00 0.00 41.52 3.18
65 66 2.124278 GGGGGCTCCGATTCAACC 60.124 66.667 0.00 0.00 0.00 3.77
66 67 2.124278 GGGGCTCCGATTCAACCC 60.124 66.667 0.00 0.00 40.05 4.11
67 68 2.124278 GGGCTCCGATTCAACCCC 60.124 66.667 0.00 0.00 34.23 4.95
68 69 2.680370 GGGCTCCGATTCAACCCCT 61.680 63.158 0.00 0.00 34.23 4.79
69 70 1.303282 GGCTCCGATTCAACCCCTT 59.697 57.895 0.00 0.00 0.00 3.95
70 71 0.748367 GGCTCCGATTCAACCCCTTC 60.748 60.000 0.00 0.00 0.00 3.46
71 72 0.748367 GCTCCGATTCAACCCCTTCC 60.748 60.000 0.00 0.00 0.00 3.46
72 73 0.618458 CTCCGATTCAACCCCTTCCA 59.382 55.000 0.00 0.00 0.00 3.53
73 74 0.326927 TCCGATTCAACCCCTTCCAC 59.673 55.000 0.00 0.00 0.00 4.02
74 75 0.679960 CCGATTCAACCCCTTCCACC 60.680 60.000 0.00 0.00 0.00 4.61
75 76 0.679960 CGATTCAACCCCTTCCACCC 60.680 60.000 0.00 0.00 0.00 4.61
76 77 0.324368 GATTCAACCCCTTCCACCCC 60.324 60.000 0.00 0.00 0.00 4.95
77 78 0.780090 ATTCAACCCCTTCCACCCCT 60.780 55.000 0.00 0.00 0.00 4.79
78 79 1.432023 TTCAACCCCTTCCACCCCTC 61.432 60.000 0.00 0.00 0.00 4.30
79 80 2.534533 AACCCCTTCCACCCCTCC 60.535 66.667 0.00 0.00 0.00 4.30
80 81 4.695791 ACCCCTTCCACCCCTCCC 62.696 72.222 0.00 0.00 0.00 4.30
88 89 3.006728 CACCCCTCCCGGCAACTA 61.007 66.667 0.00 0.00 0.00 2.24
89 90 2.687566 ACCCCTCCCGGCAACTAG 60.688 66.667 0.00 0.00 0.00 2.57
90 91 3.480133 CCCCTCCCGGCAACTAGG 61.480 72.222 0.00 0.00 0.00 3.02
91 92 2.365105 CCCTCCCGGCAACTAGGA 60.365 66.667 0.00 0.00 35.58 2.94
92 93 2.732619 CCCTCCCGGCAACTAGGAC 61.733 68.421 0.00 0.00 33.54 3.85
93 94 1.686110 CCTCCCGGCAACTAGGACT 60.686 63.158 0.00 0.00 33.54 3.85
94 95 1.677637 CCTCCCGGCAACTAGGACTC 61.678 65.000 0.00 0.00 33.54 3.36
95 96 0.970937 CTCCCGGCAACTAGGACTCA 60.971 60.000 0.00 0.00 33.54 3.41
96 97 0.325296 TCCCGGCAACTAGGACTCAT 60.325 55.000 0.00 0.00 32.25 2.90
97 98 0.105039 CCCGGCAACTAGGACTCATC 59.895 60.000 0.00 0.00 0.00 2.92
98 99 1.115467 CCGGCAACTAGGACTCATCT 58.885 55.000 0.00 0.00 0.00 2.90
99 100 1.067821 CCGGCAACTAGGACTCATCTC 59.932 57.143 0.00 0.00 0.00 2.75
100 101 1.268794 CGGCAACTAGGACTCATCTCG 60.269 57.143 0.00 0.00 0.00 4.04
101 102 2.025155 GGCAACTAGGACTCATCTCGA 58.975 52.381 0.00 0.00 0.00 4.04
102 103 2.625790 GGCAACTAGGACTCATCTCGAT 59.374 50.000 0.00 0.00 0.00 3.59
103 104 3.305064 GGCAACTAGGACTCATCTCGATC 60.305 52.174 0.00 0.00 0.00 3.69
104 105 3.316588 GCAACTAGGACTCATCTCGATCA 59.683 47.826 0.00 0.00 0.00 2.92
105 106 4.791411 GCAACTAGGACTCATCTCGATCAC 60.791 50.000 0.00 0.00 0.00 3.06
106 107 4.157849 ACTAGGACTCATCTCGATCACA 57.842 45.455 0.00 0.00 0.00 3.58
107 108 4.527944 ACTAGGACTCATCTCGATCACAA 58.472 43.478 0.00 0.00 0.00 3.33
108 109 4.578516 ACTAGGACTCATCTCGATCACAAG 59.421 45.833 0.00 0.00 0.00 3.16
109 110 2.692557 AGGACTCATCTCGATCACAAGG 59.307 50.000 0.00 0.00 0.00 3.61
110 111 2.690497 GGACTCATCTCGATCACAAGGA 59.310 50.000 0.00 0.00 0.00 3.36
111 112 3.243367 GGACTCATCTCGATCACAAGGAG 60.243 52.174 0.00 0.00 0.00 3.69
112 113 3.625853 ACTCATCTCGATCACAAGGAGA 58.374 45.455 6.82 3.89 40.75 3.71
113 114 4.214310 ACTCATCTCGATCACAAGGAGAT 58.786 43.478 4.71 4.71 45.76 2.75
117 118 4.377839 TCTCGATCACAAGGAGATGTTC 57.622 45.455 0.00 0.00 32.19 3.18
118 119 3.763897 TCTCGATCACAAGGAGATGTTCA 59.236 43.478 0.00 0.00 32.19 3.18
119 120 3.849911 TCGATCACAAGGAGATGTTCAC 58.150 45.455 0.00 0.00 0.00 3.18
120 121 2.932614 CGATCACAAGGAGATGTTCACC 59.067 50.000 0.00 0.00 0.00 4.02
121 122 3.617288 CGATCACAAGGAGATGTTCACCA 60.617 47.826 0.00 0.00 28.86 4.17
122 123 4.521146 GATCACAAGGAGATGTTCACCAT 58.479 43.478 0.00 0.00 36.13 3.55
123 124 3.678289 TCACAAGGAGATGTTCACCATG 58.322 45.455 0.00 0.00 33.18 3.66
124 125 3.327464 TCACAAGGAGATGTTCACCATGA 59.673 43.478 0.00 0.00 31.76 3.07
125 126 3.688185 CACAAGGAGATGTTCACCATGAG 59.312 47.826 0.00 0.00 31.76 2.90
126 127 3.276857 CAAGGAGATGTTCACCATGAGG 58.723 50.000 0.00 0.00 42.21 3.86
127 128 1.842562 AGGAGATGTTCACCATGAGGG 59.157 52.381 0.00 0.00 44.81 4.30
128 129 1.839994 GGAGATGTTCACCATGAGGGA 59.160 52.381 0.00 0.00 41.15 4.20
129 130 2.158842 GGAGATGTTCACCATGAGGGAG 60.159 54.545 0.00 0.00 41.15 4.30
130 131 2.503356 GAGATGTTCACCATGAGGGAGT 59.497 50.000 0.00 0.00 41.15 3.85
131 132 2.238144 AGATGTTCACCATGAGGGAGTG 59.762 50.000 0.00 0.00 41.15 3.51
132 133 0.692476 TGTTCACCATGAGGGAGTGG 59.308 55.000 0.00 0.00 41.15 4.00
133 134 0.035056 GTTCACCATGAGGGAGTGGG 60.035 60.000 0.00 0.00 39.86 4.61
134 135 1.207488 TTCACCATGAGGGAGTGGGG 61.207 60.000 0.00 0.00 40.36 4.96
135 136 1.925455 CACCATGAGGGAGTGGGGT 60.925 63.158 0.00 0.00 39.86 4.95
136 137 0.620410 CACCATGAGGGAGTGGGGTA 60.620 60.000 0.00 0.00 39.86 3.69
137 138 0.346932 ACCATGAGGGAGTGGGGTAT 59.653 55.000 0.00 0.00 39.86 2.73
138 139 1.275002 ACCATGAGGGAGTGGGGTATT 60.275 52.381 0.00 0.00 39.86 1.89
139 140 1.852965 CCATGAGGGAGTGGGGTATTT 59.147 52.381 0.00 0.00 40.01 1.40
140 141 2.244769 CCATGAGGGAGTGGGGTATTTT 59.755 50.000 0.00 0.00 40.01 1.82
141 142 3.461831 CCATGAGGGAGTGGGGTATTTTA 59.538 47.826 0.00 0.00 40.01 1.52
142 143 4.079443 CCATGAGGGAGTGGGGTATTTTAA 60.079 45.833 0.00 0.00 40.01 1.52
143 144 5.400189 CCATGAGGGAGTGGGGTATTTTAAT 60.400 44.000 0.00 0.00 40.01 1.40
144 145 5.806955 TGAGGGAGTGGGGTATTTTAATT 57.193 39.130 0.00 0.00 0.00 1.40
145 146 5.762279 TGAGGGAGTGGGGTATTTTAATTC 58.238 41.667 0.00 0.00 0.00 2.17
146 147 5.494706 TGAGGGAGTGGGGTATTTTAATTCT 59.505 40.000 0.00 0.00 0.00 2.40
147 148 6.011096 TGAGGGAGTGGGGTATTTTAATTCTT 60.011 38.462 0.00 0.00 0.00 2.52
148 149 6.811574 AGGGAGTGGGGTATTTTAATTCTTT 58.188 36.000 0.00 0.00 0.00 2.52
149 150 6.667848 AGGGAGTGGGGTATTTTAATTCTTTG 59.332 38.462 0.00 0.00 0.00 2.77
150 151 6.338146 GGAGTGGGGTATTTTAATTCTTTGC 58.662 40.000 0.00 0.00 0.00 3.68
151 152 5.961272 AGTGGGGTATTTTAATTCTTTGCG 58.039 37.500 0.00 0.00 0.00 4.85
152 153 5.479027 AGTGGGGTATTTTAATTCTTTGCGT 59.521 36.000 0.00 0.00 0.00 5.24
153 154 6.014925 AGTGGGGTATTTTAATTCTTTGCGTT 60.015 34.615 0.00 0.00 0.00 4.84
154 155 6.309494 GTGGGGTATTTTAATTCTTTGCGTTC 59.691 38.462 0.00 0.00 0.00 3.95
155 156 6.209788 TGGGGTATTTTAATTCTTTGCGTTCT 59.790 34.615 0.00 0.00 0.00 3.01
156 157 7.094631 GGGGTATTTTAATTCTTTGCGTTCTT 58.905 34.615 0.00 0.00 0.00 2.52
157 158 7.601130 GGGGTATTTTAATTCTTTGCGTTCTTT 59.399 33.333 0.00 0.00 0.00 2.52
158 159 8.432359 GGGTATTTTAATTCTTTGCGTTCTTTG 58.568 33.333 0.00 0.00 0.00 2.77
159 160 7.949962 GGTATTTTAATTCTTTGCGTTCTTTGC 59.050 33.333 0.00 0.00 0.00 3.68
160 161 5.553692 TTTAATTCTTTGCGTTCTTTGCG 57.446 34.783 0.00 0.00 34.24 4.85
161 162 2.050477 ATTCTTTGCGTTCTTTGCGG 57.950 45.000 0.00 0.00 34.24 5.69
162 163 0.593773 TTCTTTGCGTTCTTTGCGGC 60.594 50.000 0.00 0.00 34.24 6.53
163 164 1.299014 CTTTGCGTTCTTTGCGGCA 60.299 52.632 0.00 0.00 34.24 5.69
164 165 0.664166 CTTTGCGTTCTTTGCGGCAT 60.664 50.000 2.28 0.00 34.24 4.40
165 166 0.938637 TTTGCGTTCTTTGCGGCATG 60.939 50.000 2.28 0.00 34.24 4.06
166 167 3.174573 GCGTTCTTTGCGGCATGC 61.175 61.111 9.90 9.90 46.70 4.06
167 168 2.562912 CGTTCTTTGCGGCATGCT 59.437 55.556 18.92 0.00 46.63 3.79
168 169 1.512734 CGTTCTTTGCGGCATGCTC 60.513 57.895 18.92 10.47 46.63 4.26
169 170 1.878775 GTTCTTTGCGGCATGCTCT 59.121 52.632 18.92 0.00 46.63 4.09
170 171 0.179179 GTTCTTTGCGGCATGCTCTC 60.179 55.000 18.92 7.50 46.63 3.20
171 172 0.321919 TTCTTTGCGGCATGCTCTCT 60.322 50.000 18.92 0.00 46.63 3.10
172 173 1.022982 TCTTTGCGGCATGCTCTCTG 61.023 55.000 18.92 3.97 46.63 3.35
173 174 1.003476 TTTGCGGCATGCTCTCTGA 60.003 52.632 18.92 0.00 46.63 3.27
174 175 0.393402 TTTGCGGCATGCTCTCTGAT 60.393 50.000 18.92 0.00 46.63 2.90
175 176 0.393402 TTGCGGCATGCTCTCTGATT 60.393 50.000 18.92 0.00 46.63 2.57
176 177 0.393402 TGCGGCATGCTCTCTGATTT 60.393 50.000 18.92 0.00 46.63 2.17
177 178 1.134431 TGCGGCATGCTCTCTGATTTA 60.134 47.619 18.92 0.00 46.63 1.40
178 179 1.262683 GCGGCATGCTCTCTGATTTAC 59.737 52.381 18.92 0.00 41.73 2.01
179 180 1.524355 CGGCATGCTCTCTGATTTACG 59.476 52.381 18.92 3.82 0.00 3.18
180 181 1.869767 GGCATGCTCTCTGATTTACGG 59.130 52.381 18.92 0.00 0.00 4.02
181 182 2.483714 GGCATGCTCTCTGATTTACGGA 60.484 50.000 18.92 0.00 0.00 4.69
182 183 3.397482 GCATGCTCTCTGATTTACGGAT 58.603 45.455 11.37 0.00 33.03 4.18
183 184 3.431572 GCATGCTCTCTGATTTACGGATC 59.568 47.826 11.37 0.00 33.03 3.36
184 185 3.735237 TGCTCTCTGATTTACGGATCC 57.265 47.619 0.00 0.00 33.03 3.36
185 186 3.031013 TGCTCTCTGATTTACGGATCCA 58.969 45.455 13.41 0.00 33.03 3.41
186 187 3.181475 TGCTCTCTGATTTACGGATCCAC 60.181 47.826 13.41 0.00 33.03 4.02
187 188 3.181475 GCTCTCTGATTTACGGATCCACA 60.181 47.826 13.41 0.00 33.03 4.17
188 189 4.680708 GCTCTCTGATTTACGGATCCACAA 60.681 45.833 13.41 1.34 33.03 3.33
189 190 5.011090 TCTCTGATTTACGGATCCACAAG 57.989 43.478 13.41 0.00 33.03 3.16
190 191 4.122776 CTCTGATTTACGGATCCACAAGG 58.877 47.826 13.41 0.00 33.03 3.61
191 192 3.118408 TCTGATTTACGGATCCACAAGGG 60.118 47.826 13.41 0.00 34.83 3.95
192 193 2.574369 TGATTTACGGATCCACAAGGGT 59.426 45.455 13.41 2.59 38.11 4.34
193 194 3.009695 TGATTTACGGATCCACAAGGGTT 59.990 43.478 13.41 0.00 38.11 4.11
194 195 2.483014 TTACGGATCCACAAGGGTTG 57.517 50.000 13.41 0.00 38.11 3.77
195 196 1.646912 TACGGATCCACAAGGGTTGA 58.353 50.000 13.41 0.00 38.11 3.18
196 197 0.324943 ACGGATCCACAAGGGTTGAG 59.675 55.000 13.41 0.00 38.11 3.02
197 198 0.392998 CGGATCCACAAGGGTTGAGG 60.393 60.000 13.41 0.00 42.00 3.86
198 199 0.034089 GGATCCACAAGGGTTGAGGG 60.034 60.000 6.95 0.77 41.13 4.30
199 200 0.034089 GATCCACAAGGGTTGAGGGG 60.034 60.000 3.68 0.00 41.13 4.79
200 201 2.155197 ATCCACAAGGGTTGAGGGGC 62.155 60.000 3.68 0.00 41.13 5.80
201 202 2.520458 CACAAGGGTTGAGGGGCA 59.480 61.111 0.00 0.00 0.00 5.36
202 203 1.152567 CACAAGGGTTGAGGGGCAA 60.153 57.895 0.00 0.00 0.00 4.52
203 204 0.758685 CACAAGGGTTGAGGGGCAAA 60.759 55.000 0.00 0.00 38.44 3.68
204 205 0.190815 ACAAGGGTTGAGGGGCAAAT 59.809 50.000 0.00 0.00 38.44 2.32
205 206 0.897621 CAAGGGTTGAGGGGCAAATC 59.102 55.000 0.00 0.00 38.44 2.17
206 207 0.252239 AAGGGTTGAGGGGCAAATCC 60.252 55.000 0.00 0.00 38.44 3.01
207 208 1.078347 GGGTTGAGGGGCAAATCCA 59.922 57.895 0.00 0.00 38.44 3.41
208 209 0.325577 GGGTTGAGGGGCAAATCCAT 60.326 55.000 0.00 0.00 38.44 3.41
209 210 1.571955 GGTTGAGGGGCAAATCCATT 58.428 50.000 0.00 0.00 38.44 3.16
210 211 2.625617 GGGTTGAGGGGCAAATCCATTA 60.626 50.000 0.00 0.00 38.44 1.90
211 212 2.430694 GGTTGAGGGGCAAATCCATTAC 59.569 50.000 0.00 0.00 38.44 1.89
212 213 3.365472 GTTGAGGGGCAAATCCATTACT 58.635 45.455 0.00 0.00 38.44 2.24
213 214 4.532834 GTTGAGGGGCAAATCCATTACTA 58.467 43.478 0.00 0.00 38.44 1.82
214 215 4.164843 TGAGGGGCAAATCCATTACTAC 57.835 45.455 0.00 0.00 36.21 2.73
215 216 3.139077 GAGGGGCAAATCCATTACTACG 58.861 50.000 0.00 0.00 36.21 3.51
216 217 1.607148 GGGGCAAATCCATTACTACGC 59.393 52.381 0.00 0.00 36.21 4.42
217 218 1.263217 GGGCAAATCCATTACTACGCG 59.737 52.381 3.53 3.53 36.21 6.01
218 219 1.937899 GGCAAATCCATTACTACGCGT 59.062 47.619 19.17 19.17 34.01 6.01
219 220 2.286184 GGCAAATCCATTACTACGCGTG 60.286 50.000 24.59 14.48 34.01 5.34
220 221 2.849502 GCAAATCCATTACTACGCGTGC 60.850 50.000 24.59 7.97 0.00 5.34
221 222 1.205657 AATCCATTACTACGCGTGCG 58.794 50.000 24.59 15.43 46.03 5.34
254 255 8.863872 TTCAGAATTTCCTAGAACCTAAAAGG 57.136 34.615 0.00 0.00 42.49 3.11
291 292 8.902040 ATTTTTCTTCAATAATCGAGCTCAAC 57.098 30.769 15.40 0.00 0.00 3.18
292 293 7.672983 TTTTCTTCAATAATCGAGCTCAACT 57.327 32.000 15.40 0.00 0.00 3.16
293 294 8.771920 TTTTCTTCAATAATCGAGCTCAACTA 57.228 30.769 15.40 1.22 0.00 2.24
294 295 7.993821 TTCTTCAATAATCGAGCTCAACTAG 57.006 36.000 15.40 0.00 0.00 2.57
305 306 1.668419 CTCAACTAGCAATTCCGGGG 58.332 55.000 0.00 0.00 0.00 5.73
306 307 1.209504 CTCAACTAGCAATTCCGGGGA 59.790 52.381 0.00 0.00 0.00 4.81
307 308 1.631388 TCAACTAGCAATTCCGGGGAA 59.369 47.619 0.00 2.05 38.59 3.97
308 309 2.241176 TCAACTAGCAATTCCGGGGAAT 59.759 45.455 7.13 7.13 45.67 3.01
323 324 8.700439 TTCCGGGGAATTTTATCCTTATTTAG 57.300 34.615 0.00 0.00 39.57 1.85
324 325 8.048016 TCCGGGGAATTTTATCCTTATTTAGA 57.952 34.615 0.00 0.00 39.57 2.10
325 326 7.940688 TCCGGGGAATTTTATCCTTATTTAGAC 59.059 37.037 0.00 0.00 39.57 2.59
326 327 7.942894 CCGGGGAATTTTATCCTTATTTAGACT 59.057 37.037 0.00 0.00 39.57 3.24
327 328 9.350951 CGGGGAATTTTATCCTTATTTAGACTT 57.649 33.333 0.00 0.00 39.57 3.01
334 335 8.780846 TTTATCCTTATTTAGACTTTGTGCGA 57.219 30.769 0.00 0.00 0.00 5.10
335 336 6.910536 ATCCTTATTTAGACTTTGTGCGAG 57.089 37.500 0.00 0.00 0.00 5.03
336 337 4.630069 TCCTTATTTAGACTTTGTGCGAGC 59.370 41.667 0.00 0.00 0.00 5.03
337 338 4.391830 CCTTATTTAGACTTTGTGCGAGCA 59.608 41.667 0.00 0.00 0.00 4.26
338 339 5.065218 CCTTATTTAGACTTTGTGCGAGCAT 59.935 40.000 0.00 0.00 0.00 3.79
339 340 3.811722 TTTAGACTTTGTGCGAGCATG 57.188 42.857 0.00 0.00 0.00 4.06
340 341 2.455674 TAGACTTTGTGCGAGCATGT 57.544 45.000 0.00 0.00 0.00 3.21
341 342 0.870393 AGACTTTGTGCGAGCATGTG 59.130 50.000 0.00 0.00 0.00 3.21
342 343 0.727122 GACTTTGTGCGAGCATGTGC 60.727 55.000 0.00 0.00 42.49 4.57
353 354 3.077339 GCATGTGCGTTTCTGTGAC 57.923 52.632 0.00 0.00 0.00 3.67
354 355 0.722469 GCATGTGCGTTTCTGTGACG 60.722 55.000 0.00 0.00 43.04 4.35
355 356 0.581529 CATGTGCGTTTCTGTGACGT 59.418 50.000 0.00 0.00 42.22 4.34
356 357 0.581529 ATGTGCGTTTCTGTGACGTG 59.418 50.000 0.00 0.00 42.22 4.49
357 358 0.738063 TGTGCGTTTCTGTGACGTGT 60.738 50.000 0.00 0.00 42.22 4.49
358 359 0.315059 GTGCGTTTCTGTGACGTGTG 60.315 55.000 0.00 0.00 42.22 3.82
359 360 0.738063 TGCGTTTCTGTGACGTGTGT 60.738 50.000 0.00 0.00 42.22 3.72
360 361 0.315059 GCGTTTCTGTGACGTGTGTG 60.315 55.000 0.00 0.00 42.22 3.82
361 362 0.996462 CGTTTCTGTGACGTGTGTGT 59.004 50.000 0.00 0.00 35.88 3.72
362 363 1.006391 CGTTTCTGTGACGTGTGTGTC 60.006 52.381 0.00 0.00 39.37 3.67
363 364 2.268298 GTTTCTGTGACGTGTGTGTCT 58.732 47.619 0.00 0.00 39.64 3.41
364 365 3.441163 GTTTCTGTGACGTGTGTGTCTA 58.559 45.455 0.00 0.00 39.64 2.59
365 366 2.768833 TCTGTGACGTGTGTGTCTAC 57.231 50.000 0.00 0.00 39.64 2.59
366 367 1.003223 TCTGTGACGTGTGTGTCTACG 60.003 52.381 0.00 0.00 45.19 3.51
367 368 0.593008 TGTGACGTGTGTGTCTACGC 60.593 55.000 0.00 0.00 43.63 4.42
368 369 1.008194 TGACGTGTGTGTCTACGCC 60.008 57.895 0.00 0.00 43.63 5.68
369 370 2.050714 ACGTGTGTGTCTACGCCG 60.051 61.111 0.00 0.00 43.63 6.46
370 371 2.253154 CGTGTGTGTCTACGCCGA 59.747 61.111 0.00 0.00 36.48 5.54
371 372 1.154093 CGTGTGTGTCTACGCCGAT 60.154 57.895 0.00 0.00 36.48 4.18
372 373 1.132199 CGTGTGTGTCTACGCCGATC 61.132 60.000 0.00 0.00 36.48 3.69
373 374 1.132199 GTGTGTGTCTACGCCGATCG 61.132 60.000 8.51 8.51 45.38 3.69
374 375 1.585521 GTGTGTCTACGCCGATCGG 60.586 63.158 30.03 30.03 43.86 4.18
375 376 2.025727 GTGTCTACGCCGATCGGG 59.974 66.667 33.98 25.13 43.86 5.14
395 396 3.643978 GCGCGGCATGAGATGGTC 61.644 66.667 8.83 0.00 0.00 4.02
396 397 2.969238 CGCGGCATGAGATGGTCC 60.969 66.667 0.00 0.00 0.00 4.46
397 398 2.592861 GCGGCATGAGATGGTCCC 60.593 66.667 0.00 0.00 0.00 4.46
398 399 2.910360 CGGCATGAGATGGTCCCA 59.090 61.111 0.00 0.00 0.00 4.37
399 400 1.227764 CGGCATGAGATGGTCCCAG 60.228 63.158 0.00 0.00 0.00 4.45
400 401 1.527844 GGCATGAGATGGTCCCAGC 60.528 63.158 0.00 0.00 0.00 4.85
401 402 1.225426 GCATGAGATGGTCCCAGCA 59.775 57.895 4.17 0.00 34.38 4.41
402 403 0.818445 GCATGAGATGGTCCCAGCAG 60.818 60.000 4.17 0.00 34.38 4.24
403 404 0.835276 CATGAGATGGTCCCAGCAGA 59.165 55.000 4.17 0.00 34.38 4.26
404 405 0.835941 ATGAGATGGTCCCAGCAGAC 59.164 55.000 4.17 0.00 34.38 3.51
405 406 0.545071 TGAGATGGTCCCAGCAGACA 60.545 55.000 4.17 0.00 38.59 3.41
406 407 0.107945 GAGATGGTCCCAGCAGACAC 60.108 60.000 4.17 0.00 38.59 3.67
407 408 1.448540 GATGGTCCCAGCAGACACG 60.449 63.158 0.00 0.00 38.59 4.49
408 409 2.859273 GATGGTCCCAGCAGACACGG 62.859 65.000 0.00 0.00 38.59 4.94
410 411 4.314440 GTCCCAGCAGACACGGCA 62.314 66.667 0.00 0.00 36.73 5.69
411 412 4.314440 TCCCAGCAGACACGGCAC 62.314 66.667 0.00 0.00 0.00 5.01
412 413 4.624364 CCCAGCAGACACGGCACA 62.624 66.667 0.00 0.00 0.00 4.57
413 414 3.046087 CCAGCAGACACGGCACAG 61.046 66.667 0.00 0.00 0.00 3.66
414 415 3.720193 CAGCAGACACGGCACAGC 61.720 66.667 0.00 0.00 0.00 4.40
415 416 4.240103 AGCAGACACGGCACAGCA 62.240 61.111 0.00 0.00 0.00 4.41
416 417 4.017877 GCAGACACGGCACAGCAC 62.018 66.667 0.00 0.00 0.00 4.40
417 418 2.280389 CAGACACGGCACAGCACT 60.280 61.111 0.00 0.00 0.00 4.40
427 428 2.049433 ACAGCACTGTACGGCGAC 60.049 61.111 16.62 8.31 42.90 5.19
441 442 4.379143 CGACGTGACGAGCGACCA 62.379 66.667 13.70 0.00 35.09 4.02
442 443 2.502080 GACGTGACGAGCGACCAG 60.502 66.667 13.70 0.00 0.00 4.00
443 444 2.962827 GACGTGACGAGCGACCAGA 61.963 63.158 13.70 0.00 0.00 3.86
444 445 2.202362 CGTGACGAGCGACCAGAG 60.202 66.667 0.00 0.00 0.00 3.35
445 446 2.677979 CGTGACGAGCGACCAGAGA 61.678 63.158 0.00 0.00 0.00 3.10
446 447 1.135731 GTGACGAGCGACCAGAGAG 59.864 63.158 0.00 0.00 0.00 3.20
713 779 2.434359 GTACACACTGCCGGCTCC 60.434 66.667 29.70 0.00 0.00 4.70
806 874 3.646715 CGTCCTGGGCCAAGGGAA 61.647 66.667 27.04 4.62 37.96 3.97
807 875 2.356667 GTCCTGGGCCAAGGGAAG 59.643 66.667 27.04 0.00 37.96 3.46
808 876 2.941025 TCCTGGGCCAAGGGAAGG 60.941 66.667 27.04 11.49 37.96 3.46
811 879 2.204448 TGGGCCAAGGGAAGGGAT 60.204 61.111 2.13 0.00 0.00 3.85
812 880 0.993509 CTGGGCCAAGGGAAGGGATA 60.994 60.000 8.04 0.00 0.00 2.59
813 881 1.286305 TGGGCCAAGGGAAGGGATAC 61.286 60.000 2.13 0.00 0.00 2.24
814 882 1.148498 GGCCAAGGGAAGGGATACG 59.852 63.158 0.00 0.00 37.60 3.06
815 883 1.342672 GGCCAAGGGAAGGGATACGA 61.343 60.000 0.00 0.00 37.60 3.43
816 884 0.106894 GCCAAGGGAAGGGATACGAG 59.893 60.000 0.00 0.00 37.60 4.18
817 885 0.106894 CCAAGGGAAGGGATACGAGC 59.893 60.000 0.00 0.00 37.60 5.03
818 886 0.249489 CAAGGGAAGGGATACGAGCG 60.249 60.000 0.00 0.00 37.60 5.03
819 887 2.029221 GGGAAGGGATACGAGCGC 59.971 66.667 0.00 0.00 37.60 5.92
867 938 2.284699 CCGTCCCCCTCTCCTTGT 60.285 66.667 0.00 0.00 0.00 3.16
868 939 2.660064 CCGTCCCCCTCTCCTTGTG 61.660 68.421 0.00 0.00 0.00 3.33
874 965 0.615850 CCCCTCTCCTTGTGGAAGAC 59.384 60.000 0.00 0.00 42.66 3.01
1017 1551 1.383664 CATGGAGCAGGAGGAGGGA 60.384 63.158 0.00 0.00 0.00 4.20
1413 1974 1.255667 GCCTCGTCCTCCAAGGTACA 61.256 60.000 0.00 0.00 36.53 2.90
1421 1982 4.677250 CGTCCTCCAAGGTACATACTCAAC 60.677 50.000 0.00 0.00 36.53 3.18
1424 1985 4.440250 CCTCCAAGGTACATACTCAACTCG 60.440 50.000 0.00 0.00 0.00 4.18
1433 1998 7.014711 AGGTACATACTCAACTCGATCAATCAT 59.985 37.037 0.00 0.00 0.00 2.45
1441 2006 2.623416 ACTCGATCAATCATACAGCCGA 59.377 45.455 0.00 0.00 0.00 5.54
1452 2017 2.145397 TACAGCCGACTCTTCCTGAT 57.855 50.000 0.00 0.00 0.00 2.90
1515 2111 6.442112 CGAGATTTGACAGTGATATCTGCTA 58.558 40.000 3.98 0.00 38.84 3.49
1554 2154 5.973565 GGATAATTTTGCTGTCAATTCTCGG 59.026 40.000 0.00 0.00 31.33 4.63
1557 2157 0.874390 TTGCTGTCAATTCTCGGTGC 59.126 50.000 0.00 0.00 0.00 5.01
1558 2158 0.955428 TGCTGTCAATTCTCGGTGCC 60.955 55.000 0.00 0.00 0.00 5.01
1567 2167 0.599204 TTCTCGGTGCCTGAAACGTC 60.599 55.000 0.00 0.00 0.00 4.34
1584 2184 1.788886 CGTCTGCGTGTGATGATATGG 59.211 52.381 0.00 0.00 0.00 2.74
1585 2185 2.138320 GTCTGCGTGTGATGATATGGG 58.862 52.381 0.00 0.00 0.00 4.00
1586 2186 2.038659 TCTGCGTGTGATGATATGGGA 58.961 47.619 0.00 0.00 0.00 4.37
1587 2187 2.138320 CTGCGTGTGATGATATGGGAC 58.862 52.381 0.00 0.00 0.00 4.46
1661 2264 6.206395 AGTATCAGCCAGATAGATTCGATG 57.794 41.667 0.00 0.00 39.82 3.84
1711 2318 3.561725 GCATTGCCTATGTGTTCTACTCC 59.438 47.826 0.00 0.00 36.57 3.85
1715 2322 2.810650 CCTATGTGTTCTACTCCACGC 58.189 52.381 0.00 0.00 34.28 5.34
1802 2444 8.323140 GGCAAATTTCTTCATTTCATATTCACG 58.677 33.333 0.00 0.00 0.00 4.35
1896 2538 6.447162 AGCTACATAAACAGAAAACAAAGGC 58.553 36.000 0.00 0.00 0.00 4.35
1908 2551 0.746659 ACAAAGGCAGCAAAGTGGAC 59.253 50.000 0.00 0.00 0.00 4.02
1926 2569 7.784470 AGTGGACTGAGAAGATAGTAAAGTT 57.216 36.000 0.00 0.00 0.00 2.66
1931 2574 7.310485 GGACTGAGAAGATAGTAAAGTTGGGAA 60.310 40.741 0.00 0.00 0.00 3.97
1940 2583 4.476297 AGTAAAGTTGGGAAAACGGGAAT 58.524 39.130 0.00 0.00 0.00 3.01
1941 2584 3.744238 AAAGTTGGGAAAACGGGAATG 57.256 42.857 0.00 0.00 0.00 2.67
1969 2612 4.290155 CTGAAACGTGTCAAGGAAATTGG 58.710 43.478 10.22 0.00 39.54 3.16
2043 2690 3.269310 CGTTTCACTCGTTTTCTTGTCG 58.731 45.455 0.00 0.00 0.00 4.35
2095 2754 1.954146 CGACGTGGTGGTCCTTGTG 60.954 63.158 0.00 0.00 33.30 3.33
2160 2824 0.249868 TCTGTCCTTCGCTGTTGGTG 60.250 55.000 0.00 0.00 0.00 4.17
2186 2850 2.615912 GCTGCTCCATGATTGTCTTACC 59.384 50.000 0.00 0.00 0.00 2.85
2249 2923 6.144078 AGTTCCGCAAACAAAAAGTCTATT 57.856 33.333 2.21 0.00 40.56 1.73
2252 2926 8.357402 AGTTCCGCAAACAAAAAGTCTATTTAT 58.643 29.630 2.21 0.00 40.56 1.40
2276 2950 8.836268 ATACGTTGTTGTTTACTAATTCTCCA 57.164 30.769 0.00 0.00 0.00 3.86
2334 3052 4.501400 GCGAAATCATCCCTTATTTTGGGG 60.501 45.833 0.00 0.00 44.67 4.96
2383 3101 3.574284 TTTGGTTCATGCTTCCATTCG 57.426 42.857 4.66 0.00 0.00 3.34
2402 3124 6.183360 CCATTCGTAATTGACATTTTGCACAG 60.183 38.462 0.00 0.00 0.00 3.66
2419 3141 8.856153 TTTGCACAGAGTATAAAAATGTAGGA 57.144 30.769 0.00 0.00 0.00 2.94
2420 3142 8.492673 TTGCACAGAGTATAAAAATGTAGGAG 57.507 34.615 0.00 0.00 0.00 3.69
2421 3143 7.620880 TGCACAGAGTATAAAAATGTAGGAGT 58.379 34.615 0.00 0.00 0.00 3.85
2422 3144 8.755028 TGCACAGAGTATAAAAATGTAGGAGTA 58.245 33.333 0.00 0.00 0.00 2.59
2439 3161 8.768397 TGTAGGAGTATTATTGTGATGACCTTT 58.232 33.333 0.00 0.00 0.00 3.11
2490 3213 2.435372 TGACAAAAGGCACAAGAGGT 57.565 45.000 0.00 0.00 0.00 3.85
2499 3222 2.037772 AGGCACAAGAGGTACAAGAGTG 59.962 50.000 0.00 0.00 0.00 3.51
2712 3435 0.036671 TCTACTCGTCGCAGGACTCA 60.037 55.000 0.00 0.00 41.16 3.41
2771 3494 3.265791 CTCTTCTCACCAAGGTGCATAC 58.734 50.000 14.35 0.00 45.04 2.39
2777 3500 2.563620 TCACCAAGGTGCATACGTCTTA 59.436 45.455 14.35 0.00 45.04 2.10
2787 3510 5.581085 GGTGCATACGTCTTAACTTCAGAAT 59.419 40.000 0.00 0.00 0.00 2.40
2842 3566 3.569701 AGTTGGTTTGCACCTGACAATAG 59.430 43.478 0.00 0.00 44.61 1.73
2844 3568 2.162681 GGTTTGCACCTGACAATAGCT 58.837 47.619 0.00 0.00 40.44 3.32
2848 3572 3.251479 TGCACCTGACAATAGCTAGTG 57.749 47.619 19.13 19.13 0.00 2.74
3000 3724 3.956199 TCTACGGTTTCGAGGATTACCAT 59.044 43.478 0.00 0.00 40.11 3.55
3015 3739 2.998097 CATGGGGTGGACATCGGT 59.002 61.111 0.00 0.00 0.00 4.69
3075 3799 1.070758 GGAGAAATGCCGCTGGAGATA 59.929 52.381 0.00 0.00 0.00 1.98
3167 3891 5.008217 TGCCACTGTACACAATACAGAAAAC 59.992 40.000 18.47 7.36 45.69 2.43
3219 3955 3.756933 TCTAACCTACCGTGCAACTTT 57.243 42.857 0.00 0.00 31.75 2.66
3226 3962 3.794564 CCTACCGTGCAACTTTTGTTTTC 59.205 43.478 0.00 0.00 41.35 2.29
3317 4053 4.435970 TCAGGGCTCCGCGACCTA 62.436 66.667 8.23 0.00 32.22 3.08
3347 4083 1.504359 CGAAAGTGGCGTCCAAACTA 58.496 50.000 0.00 0.00 34.18 2.24
3410 4146 1.219124 GATCTCCAGTTCAGGCGCA 59.781 57.895 10.83 0.00 0.00 6.09
3545 4281 0.244178 AGAGCGTCGTTCTTTCTCCC 59.756 55.000 5.70 0.00 0.00 4.30
3554 4290 2.668279 CGTTCTTTCTCCCAAAATGCCG 60.668 50.000 0.00 0.00 0.00 5.69
3566 4302 3.545124 AATGCCGTTCCCGCTGTCA 62.545 57.895 0.00 0.00 0.00 3.58
3653 4389 3.001939 ACTTTGTGTTGGATTCGTCGTTC 59.998 43.478 0.00 0.00 0.00 3.95
3703 4439 2.290577 GGGTGTGATCTCAGCTTTCCTT 60.291 50.000 22.14 0.00 36.29 3.36
3706 4442 4.279420 GGTGTGATCTCAGCTTTCCTTTTT 59.721 41.667 17.39 0.00 33.69 1.94
3762 4498 8.210868 TGAAGCATCAAGTGGATACAAACACG 62.211 42.308 0.00 0.00 40.19 4.49
3770 4506 3.208747 GGATACAAACACGATGGGGAT 57.791 47.619 0.00 0.00 0.00 3.85
3771 4507 3.139077 GGATACAAACACGATGGGGATC 58.861 50.000 0.00 0.00 0.00 3.36
3772 4508 3.181454 GGATACAAACACGATGGGGATCT 60.181 47.826 0.00 0.00 0.00 2.75
3773 4509 2.403252 ACAAACACGATGGGGATCTC 57.597 50.000 0.00 0.00 0.00 2.75
3809 4568 1.479709 TCTCCAGTTCTCTAGGCAGC 58.520 55.000 0.00 0.00 0.00 5.25
3849 4608 6.970043 CCTAGAGAAGTAGTGTTCAGATTTCG 59.030 42.308 0.00 0.00 0.00 3.46
3890 4649 3.853355 AGTAATCAGGGGAGATTGCTG 57.147 47.619 6.51 0.00 45.28 4.41
3891 4650 3.387962 AGTAATCAGGGGAGATTGCTGA 58.612 45.455 6.51 0.00 45.28 4.26
3892 4651 3.390639 AGTAATCAGGGGAGATTGCTGAG 59.609 47.826 6.51 0.00 45.28 3.35
3893 4652 1.890552 ATCAGGGGAGATTGCTGAGT 58.109 50.000 0.00 0.00 0.00 3.41
3958 4725 3.911868 TGTTCAGCATGGCATAAACAAC 58.088 40.909 0.00 2.30 36.16 3.32
3966 4733 2.156098 TGGCATAAACAACGGAGGAAC 58.844 47.619 0.00 0.00 0.00 3.62
4030 4797 7.571428 GCCTACTCTGAATTTACTGACAAACAC 60.571 40.741 0.00 0.00 0.00 3.32
4139 4906 9.102757 ACATAATGAACATGACAGACAGTTATC 57.897 33.333 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 4.735358 GGTGGAAGGGGGCGAACC 62.735 72.222 0.00 0.00 39.11 3.62
12 13 4.735358 GGGTGGAAGGGGGCGAAC 62.735 72.222 0.00 0.00 0.00 3.95
18 19 4.693915 TGGGAGGGGTGGAAGGGG 62.694 72.222 0.00 0.00 0.00 4.79
19 20 2.534272 TTGGGAGGGGTGGAAGGG 60.534 66.667 0.00 0.00 0.00 3.95
20 21 2.763902 GTTGGGAGGGGTGGAAGG 59.236 66.667 0.00 0.00 0.00 3.46
21 22 2.351276 CGTTGGGAGGGGTGGAAG 59.649 66.667 0.00 0.00 0.00 3.46
22 23 3.253838 CCGTTGGGAGGGGTGGAA 61.254 66.667 0.00 0.00 34.06 3.53
25 26 3.006728 TAGCCGTTGGGAGGGGTG 61.007 66.667 0.58 0.00 41.30 4.61
26 27 3.007323 GTAGCCGTTGGGAGGGGT 61.007 66.667 0.00 0.00 43.40 4.95
27 28 2.884179 TAGGTAGCCGTTGGGAGGGG 62.884 65.000 0.00 0.00 34.06 4.79
28 29 0.979187 TTAGGTAGCCGTTGGGAGGG 60.979 60.000 0.00 0.00 34.06 4.30
29 30 0.464452 CTTAGGTAGCCGTTGGGAGG 59.536 60.000 0.00 0.00 34.06 4.30
30 31 0.464452 CCTTAGGTAGCCGTTGGGAG 59.536 60.000 0.00 0.00 34.06 4.30
31 32 0.979187 CCCTTAGGTAGCCGTTGGGA 60.979 60.000 0.00 0.00 34.61 4.37
32 33 1.525442 CCCTTAGGTAGCCGTTGGG 59.475 63.158 0.00 0.00 0.00 4.12
33 34 1.525442 CCCCTTAGGTAGCCGTTGG 59.475 63.158 0.00 0.00 0.00 3.77
34 35 1.525442 CCCCCTTAGGTAGCCGTTG 59.475 63.158 0.00 0.00 0.00 4.10
35 36 2.372890 GCCCCCTTAGGTAGCCGTT 61.373 63.158 0.00 0.00 0.00 4.44
36 37 2.767073 GCCCCCTTAGGTAGCCGT 60.767 66.667 0.00 0.00 0.00 5.68
37 38 2.446036 AGCCCCCTTAGGTAGCCG 60.446 66.667 6.20 0.00 32.17 5.52
38 39 2.148052 GGAGCCCCCTTAGGTAGCC 61.148 68.421 6.20 0.00 32.17 3.93
39 40 2.508751 CGGAGCCCCCTTAGGTAGC 61.509 68.421 0.00 0.00 0.00 3.58
40 41 0.178929 ATCGGAGCCCCCTTAGGTAG 60.179 60.000 0.00 0.00 0.00 3.18
41 42 0.266753 AATCGGAGCCCCCTTAGGTA 59.733 55.000 0.00 0.00 0.00 3.08
42 43 1.004361 AATCGGAGCCCCCTTAGGT 59.996 57.895 0.00 0.00 0.00 3.08
43 44 1.054406 TGAATCGGAGCCCCCTTAGG 61.054 60.000 0.00 0.00 0.00 2.69
44 45 0.837272 TTGAATCGGAGCCCCCTTAG 59.163 55.000 0.00 0.00 0.00 2.18
45 46 0.544697 GTTGAATCGGAGCCCCCTTA 59.455 55.000 0.00 0.00 0.00 2.69
46 47 1.303282 GTTGAATCGGAGCCCCCTT 59.697 57.895 0.00 0.00 0.00 3.95
47 48 2.680370 GGTTGAATCGGAGCCCCCT 61.680 63.158 0.00 0.00 0.00 4.79
48 49 2.124278 GGTTGAATCGGAGCCCCC 60.124 66.667 0.00 0.00 0.00 5.40
49 50 2.124278 GGGTTGAATCGGAGCCCC 60.124 66.667 0.00 0.00 33.40 5.80
50 51 2.124278 GGGGTTGAATCGGAGCCC 60.124 66.667 7.74 7.74 45.42 5.19
51 52 0.748367 GAAGGGGTTGAATCGGAGCC 60.748 60.000 0.00 0.00 0.00 4.70
52 53 0.748367 GGAAGGGGTTGAATCGGAGC 60.748 60.000 0.00 0.00 0.00 4.70
53 54 0.618458 TGGAAGGGGTTGAATCGGAG 59.382 55.000 0.00 0.00 0.00 4.63
54 55 0.326927 GTGGAAGGGGTTGAATCGGA 59.673 55.000 0.00 0.00 0.00 4.55
55 56 0.679960 GGTGGAAGGGGTTGAATCGG 60.680 60.000 0.00 0.00 0.00 4.18
56 57 0.679960 GGGTGGAAGGGGTTGAATCG 60.680 60.000 0.00 0.00 0.00 3.34
57 58 0.324368 GGGGTGGAAGGGGTTGAATC 60.324 60.000 0.00 0.00 0.00 2.52
58 59 0.780090 AGGGGTGGAAGGGGTTGAAT 60.780 55.000 0.00 0.00 0.00 2.57
59 60 1.388217 AGGGGTGGAAGGGGTTGAA 60.388 57.895 0.00 0.00 0.00 2.69
60 61 1.850755 GAGGGGTGGAAGGGGTTGA 60.851 63.158 0.00 0.00 0.00 3.18
61 62 2.763902 GAGGGGTGGAAGGGGTTG 59.236 66.667 0.00 0.00 0.00 3.77
62 63 2.534533 GGAGGGGTGGAAGGGGTT 60.535 66.667 0.00 0.00 0.00 4.11
63 64 4.695791 GGGAGGGGTGGAAGGGGT 62.696 72.222 0.00 0.00 0.00 4.95
76 77 0.970937 TGAGTCCTAGTTGCCGGGAG 60.971 60.000 2.18 0.00 0.00 4.30
77 78 0.325296 ATGAGTCCTAGTTGCCGGGA 60.325 55.000 2.18 0.00 0.00 5.14
78 79 0.105039 GATGAGTCCTAGTTGCCGGG 59.895 60.000 2.18 0.00 0.00 5.73
79 80 1.067821 GAGATGAGTCCTAGTTGCCGG 59.932 57.143 0.00 0.00 0.00 6.13
80 81 1.268794 CGAGATGAGTCCTAGTTGCCG 60.269 57.143 0.00 0.00 0.00 5.69
81 82 2.025155 TCGAGATGAGTCCTAGTTGCC 58.975 52.381 0.00 0.00 0.00 4.52
82 83 3.316588 TGATCGAGATGAGTCCTAGTTGC 59.683 47.826 0.00 0.00 0.00 4.17
83 84 4.336713 TGTGATCGAGATGAGTCCTAGTTG 59.663 45.833 0.00 0.00 0.00 3.16
84 85 4.527944 TGTGATCGAGATGAGTCCTAGTT 58.472 43.478 0.00 0.00 0.00 2.24
85 86 4.157849 TGTGATCGAGATGAGTCCTAGT 57.842 45.455 0.00 0.00 0.00 2.57
86 87 4.023279 CCTTGTGATCGAGATGAGTCCTAG 60.023 50.000 0.00 0.00 0.00 3.02
87 88 3.885901 CCTTGTGATCGAGATGAGTCCTA 59.114 47.826 0.00 0.00 0.00 2.94
88 89 2.692557 CCTTGTGATCGAGATGAGTCCT 59.307 50.000 0.00 0.00 0.00 3.85
89 90 2.690497 TCCTTGTGATCGAGATGAGTCC 59.310 50.000 0.00 0.00 0.00 3.85
90 91 3.629855 TCTCCTTGTGATCGAGATGAGTC 59.370 47.826 0.00 0.00 0.00 3.36
91 92 3.625853 TCTCCTTGTGATCGAGATGAGT 58.374 45.455 0.00 0.00 0.00 3.41
92 93 4.852134 ATCTCCTTGTGATCGAGATGAG 57.148 45.455 8.68 3.03 40.89 2.90
95 96 4.403752 TGAACATCTCCTTGTGATCGAGAT 59.596 41.667 4.71 4.71 42.70 2.75
96 97 3.763897 TGAACATCTCCTTGTGATCGAGA 59.236 43.478 0.00 0.53 37.08 4.04
97 98 3.862267 GTGAACATCTCCTTGTGATCGAG 59.138 47.826 0.00 0.00 0.00 4.04
98 99 3.368427 GGTGAACATCTCCTTGTGATCGA 60.368 47.826 0.00 0.00 0.00 3.59
99 100 2.932614 GGTGAACATCTCCTTGTGATCG 59.067 50.000 0.00 0.00 0.00 3.69
100 101 3.942829 TGGTGAACATCTCCTTGTGATC 58.057 45.455 0.77 0.00 31.62 2.92
101 102 4.019051 TCATGGTGAACATCTCCTTGTGAT 60.019 41.667 11.64 0.00 37.84 3.06
102 103 3.327464 TCATGGTGAACATCTCCTTGTGA 59.673 43.478 11.64 6.18 37.84 3.58
103 104 3.678289 TCATGGTGAACATCTCCTTGTG 58.322 45.455 11.64 4.55 37.84 3.33
104 105 3.307975 CCTCATGGTGAACATCTCCTTGT 60.308 47.826 11.64 0.00 37.84 3.16
105 106 3.276857 CCTCATGGTGAACATCTCCTTG 58.723 50.000 0.00 7.60 37.84 3.61
106 107 2.240667 CCCTCATGGTGAACATCTCCTT 59.759 50.000 0.00 0.00 37.84 3.36
107 108 1.842562 CCCTCATGGTGAACATCTCCT 59.157 52.381 0.00 0.00 37.84 3.69
108 109 1.839994 TCCCTCATGGTGAACATCTCC 59.160 52.381 0.00 0.00 37.84 3.71
109 110 2.503356 ACTCCCTCATGGTGAACATCTC 59.497 50.000 0.00 0.00 37.84 2.75
110 111 2.238144 CACTCCCTCATGGTGAACATCT 59.762 50.000 0.00 0.00 37.84 2.90
111 112 2.636830 CACTCCCTCATGGTGAACATC 58.363 52.381 0.00 0.00 37.84 3.06
112 113 1.283029 CCACTCCCTCATGGTGAACAT 59.717 52.381 0.00 0.00 41.57 2.71
113 114 0.692476 CCACTCCCTCATGGTGAACA 59.308 55.000 0.00 0.00 33.32 3.18
114 115 0.035056 CCCACTCCCTCATGGTGAAC 60.035 60.000 0.00 0.00 33.80 3.18
115 116 1.207488 CCCCACTCCCTCATGGTGAA 61.207 60.000 0.00 0.00 33.80 3.18
116 117 1.616327 CCCCACTCCCTCATGGTGA 60.616 63.158 0.00 0.00 33.80 4.02
117 118 0.620410 TACCCCACTCCCTCATGGTG 60.620 60.000 0.00 0.00 33.80 4.17
118 119 0.346932 ATACCCCACTCCCTCATGGT 59.653 55.000 0.00 0.00 33.80 3.55
119 120 1.522900 AATACCCCACTCCCTCATGG 58.477 55.000 0.00 0.00 35.59 3.66
120 121 3.669939 AAAATACCCCACTCCCTCATG 57.330 47.619 0.00 0.00 0.00 3.07
121 122 6.162241 AGAATTAAAATACCCCACTCCCTCAT 59.838 38.462 0.00 0.00 0.00 2.90
122 123 5.494706 AGAATTAAAATACCCCACTCCCTCA 59.505 40.000 0.00 0.00 0.00 3.86
123 124 6.014771 AGAATTAAAATACCCCACTCCCTC 57.985 41.667 0.00 0.00 0.00 4.30
124 125 6.417503 AAGAATTAAAATACCCCACTCCCT 57.582 37.500 0.00 0.00 0.00 4.20
125 126 6.629515 GCAAAGAATTAAAATACCCCACTCCC 60.630 42.308 0.00 0.00 0.00 4.30
126 127 6.338146 GCAAAGAATTAAAATACCCCACTCC 58.662 40.000 0.00 0.00 0.00 3.85
127 128 6.033966 CGCAAAGAATTAAAATACCCCACTC 58.966 40.000 0.00 0.00 0.00 3.51
128 129 5.479027 ACGCAAAGAATTAAAATACCCCACT 59.521 36.000 0.00 0.00 0.00 4.00
129 130 5.716094 ACGCAAAGAATTAAAATACCCCAC 58.284 37.500 0.00 0.00 0.00 4.61
130 131 5.986501 ACGCAAAGAATTAAAATACCCCA 57.013 34.783 0.00 0.00 0.00 4.96
131 132 6.627243 AGAACGCAAAGAATTAAAATACCCC 58.373 36.000 0.00 0.00 0.00 4.95
132 133 8.432359 CAAAGAACGCAAAGAATTAAAATACCC 58.568 33.333 0.00 0.00 0.00 3.69
133 134 7.949962 GCAAAGAACGCAAAGAATTAAAATACC 59.050 33.333 0.00 0.00 0.00 2.73
134 135 7.678428 CGCAAAGAACGCAAAGAATTAAAATAC 59.322 33.333 0.00 0.00 0.00 1.89
135 136 7.148885 CCGCAAAGAACGCAAAGAATTAAAATA 60.149 33.333 0.00 0.00 0.00 1.40
136 137 6.346518 CCGCAAAGAACGCAAAGAATTAAAAT 60.347 34.615 0.00 0.00 0.00 1.82
137 138 5.051374 CCGCAAAGAACGCAAAGAATTAAAA 60.051 36.000 0.00 0.00 0.00 1.52
138 139 4.442733 CCGCAAAGAACGCAAAGAATTAAA 59.557 37.500 0.00 0.00 0.00 1.52
139 140 3.978217 CCGCAAAGAACGCAAAGAATTAA 59.022 39.130 0.00 0.00 0.00 1.40
140 141 3.560503 CCGCAAAGAACGCAAAGAATTA 58.439 40.909 0.00 0.00 0.00 1.40
141 142 2.393764 CCGCAAAGAACGCAAAGAATT 58.606 42.857 0.00 0.00 0.00 2.17
142 143 1.930371 GCCGCAAAGAACGCAAAGAAT 60.930 47.619 0.00 0.00 0.00 2.40
143 144 0.593773 GCCGCAAAGAACGCAAAGAA 60.594 50.000 0.00 0.00 0.00 2.52
144 145 1.008995 GCCGCAAAGAACGCAAAGA 60.009 52.632 0.00 0.00 0.00 2.52
145 146 0.664166 ATGCCGCAAAGAACGCAAAG 60.664 50.000 0.00 0.00 0.00 2.77
146 147 0.938637 CATGCCGCAAAGAACGCAAA 60.939 50.000 0.00 0.00 0.00 3.68
147 148 1.371512 CATGCCGCAAAGAACGCAA 60.372 52.632 0.00 0.00 0.00 4.85
148 149 2.254951 CATGCCGCAAAGAACGCA 59.745 55.556 0.00 0.00 0.00 5.24
149 150 3.174573 GCATGCCGCAAAGAACGC 61.175 61.111 6.36 0.00 41.79 4.84
150 151 1.512734 GAGCATGCCGCAAAGAACG 60.513 57.895 15.66 0.00 46.13 3.95
151 152 0.179179 GAGAGCATGCCGCAAAGAAC 60.179 55.000 15.66 0.00 46.13 3.01
152 153 0.321919 AGAGAGCATGCCGCAAAGAA 60.322 50.000 15.66 0.00 46.13 2.52
153 154 1.022982 CAGAGAGCATGCCGCAAAGA 61.023 55.000 15.66 0.00 46.13 2.52
154 155 1.022982 TCAGAGAGCATGCCGCAAAG 61.023 55.000 15.66 0.33 46.13 2.77
155 156 0.393402 ATCAGAGAGCATGCCGCAAA 60.393 50.000 15.66 0.00 46.13 3.68
156 157 0.393402 AATCAGAGAGCATGCCGCAA 60.393 50.000 15.66 1.22 46.13 4.85
157 158 0.393402 AAATCAGAGAGCATGCCGCA 60.393 50.000 15.66 0.00 46.13 5.69
158 159 1.262683 GTAAATCAGAGAGCATGCCGC 59.737 52.381 15.66 7.10 42.91 6.53
159 160 1.524355 CGTAAATCAGAGAGCATGCCG 59.476 52.381 15.66 1.80 0.00 5.69
160 161 1.869767 CCGTAAATCAGAGAGCATGCC 59.130 52.381 15.66 6.03 0.00 4.40
161 162 2.826428 TCCGTAAATCAGAGAGCATGC 58.174 47.619 10.51 10.51 0.00 4.06
162 163 3.993081 GGATCCGTAAATCAGAGAGCATG 59.007 47.826 0.00 0.00 0.00 4.06
163 164 3.643320 TGGATCCGTAAATCAGAGAGCAT 59.357 43.478 7.39 0.00 0.00 3.79
164 165 3.031013 TGGATCCGTAAATCAGAGAGCA 58.969 45.455 7.39 0.00 0.00 4.26
165 166 3.181475 TGTGGATCCGTAAATCAGAGAGC 60.181 47.826 7.39 0.00 0.00 4.09
166 167 4.655762 TGTGGATCCGTAAATCAGAGAG 57.344 45.455 7.39 0.00 0.00 3.20
167 168 4.141937 CCTTGTGGATCCGTAAATCAGAGA 60.142 45.833 7.39 0.00 34.57 3.10
168 169 4.122776 CCTTGTGGATCCGTAAATCAGAG 58.877 47.826 7.39 0.00 34.57 3.35
169 170 3.118408 CCCTTGTGGATCCGTAAATCAGA 60.118 47.826 7.39 0.00 35.39 3.27
170 171 3.206150 CCCTTGTGGATCCGTAAATCAG 58.794 50.000 7.39 0.00 35.39 2.90
171 172 2.574369 ACCCTTGTGGATCCGTAAATCA 59.426 45.455 7.39 0.00 38.00 2.57
172 173 3.277142 ACCCTTGTGGATCCGTAAATC 57.723 47.619 7.39 0.00 38.00 2.17
173 174 3.009695 TCAACCCTTGTGGATCCGTAAAT 59.990 43.478 7.39 0.00 38.00 1.40
174 175 2.372504 TCAACCCTTGTGGATCCGTAAA 59.627 45.455 7.39 0.23 38.00 2.01
175 176 1.979308 TCAACCCTTGTGGATCCGTAA 59.021 47.619 7.39 3.77 38.00 3.18
176 177 1.553248 CTCAACCCTTGTGGATCCGTA 59.447 52.381 7.39 0.00 38.00 4.02
177 178 0.324943 CTCAACCCTTGTGGATCCGT 59.675 55.000 7.39 0.00 38.00 4.69
178 179 0.392998 CCTCAACCCTTGTGGATCCG 60.393 60.000 7.39 0.00 44.91 4.18
179 180 0.034089 CCCTCAACCCTTGTGGATCC 60.034 60.000 4.20 4.20 44.91 3.36
180 181 0.034089 CCCCTCAACCCTTGTGGATC 60.034 60.000 4.92 0.00 44.91 3.36
181 182 2.087248 CCCCTCAACCCTTGTGGAT 58.913 57.895 4.92 0.00 44.91 3.41
182 183 2.840753 GCCCCTCAACCCTTGTGGA 61.841 63.158 4.92 0.00 44.91 4.02
183 184 2.283173 GCCCCTCAACCCTTGTGG 60.283 66.667 0.00 0.00 42.47 4.17
184 185 0.758685 TTTGCCCCTCAACCCTTGTG 60.759 55.000 0.00 0.00 33.73 3.33
185 186 0.190815 ATTTGCCCCTCAACCCTTGT 59.809 50.000 0.00 0.00 33.73 3.16
186 187 0.897621 GATTTGCCCCTCAACCCTTG 59.102 55.000 0.00 0.00 33.73 3.61
187 188 0.252239 GGATTTGCCCCTCAACCCTT 60.252 55.000 0.00 0.00 33.73 3.95
188 189 1.388133 GGATTTGCCCCTCAACCCT 59.612 57.895 0.00 0.00 33.73 4.34
189 190 0.325577 ATGGATTTGCCCCTCAACCC 60.326 55.000 0.00 0.00 33.73 4.11
190 191 1.571955 AATGGATTTGCCCCTCAACC 58.428 50.000 0.00 0.00 33.73 3.77
191 192 3.365472 AGTAATGGATTTGCCCCTCAAC 58.635 45.455 0.00 0.00 33.73 3.18
192 193 3.756082 AGTAATGGATTTGCCCCTCAA 57.244 42.857 0.00 0.00 34.97 3.02
193 194 3.433031 CGTAGTAATGGATTTGCCCCTCA 60.433 47.826 0.00 0.00 34.97 3.86
194 195 3.139077 CGTAGTAATGGATTTGCCCCTC 58.861 50.000 0.00 0.00 34.97 4.30
195 196 2.748465 GCGTAGTAATGGATTTGCCCCT 60.748 50.000 0.00 0.00 34.97 4.79
196 197 1.607148 GCGTAGTAATGGATTTGCCCC 59.393 52.381 0.00 0.00 34.97 5.80
197 198 1.263217 CGCGTAGTAATGGATTTGCCC 59.737 52.381 0.00 0.00 34.97 5.36
198 199 1.937899 ACGCGTAGTAATGGATTTGCC 59.062 47.619 11.67 0.00 37.10 4.52
199 200 2.849502 GCACGCGTAGTAATGGATTTGC 60.850 50.000 13.44 1.89 0.00 3.68
200 201 2.596575 CGCACGCGTAGTAATGGATTTG 60.597 50.000 13.44 0.00 34.35 2.32
201 202 1.591158 CGCACGCGTAGTAATGGATTT 59.409 47.619 13.44 0.00 34.35 2.17
202 203 1.205657 CGCACGCGTAGTAATGGATT 58.794 50.000 13.44 0.00 34.35 3.01
203 204 2.881441 CGCACGCGTAGTAATGGAT 58.119 52.632 13.44 0.00 34.35 3.41
204 205 4.388007 CGCACGCGTAGTAATGGA 57.612 55.556 13.44 0.00 34.35 3.41
228 229 9.297037 CCTTTTAGGTTCTAGGAAATTCTGAAA 57.703 33.333 0.00 0.00 0.00 2.69
229 230 8.863872 CCTTTTAGGTTCTAGGAAATTCTGAA 57.136 34.615 0.00 0.00 0.00 3.02
265 266 9.988350 GTTGAGCTCGATTATTGAAGAAAAATA 57.012 29.630 7.00 0.00 0.00 1.40
266 267 8.734386 AGTTGAGCTCGATTATTGAAGAAAAAT 58.266 29.630 7.00 0.00 0.00 1.82
267 268 8.099364 AGTTGAGCTCGATTATTGAAGAAAAA 57.901 30.769 7.00 0.00 0.00 1.94
268 269 7.672983 AGTTGAGCTCGATTATTGAAGAAAA 57.327 32.000 7.00 0.00 0.00 2.29
269 270 8.412608 CTAGTTGAGCTCGATTATTGAAGAAA 57.587 34.615 7.00 0.00 0.00 2.52
270 271 7.993821 CTAGTTGAGCTCGATTATTGAAGAA 57.006 36.000 7.00 0.00 0.00 2.52
286 287 1.209504 TCCCCGGAATTGCTAGTTGAG 59.790 52.381 0.73 0.00 0.00 3.02
287 288 1.281419 TCCCCGGAATTGCTAGTTGA 58.719 50.000 0.73 0.00 0.00 3.18
288 289 2.122783 TTCCCCGGAATTGCTAGTTG 57.877 50.000 0.73 0.00 0.00 3.16
297 298 9.309224 CTAAATAAGGATAAAATTCCCCGGAAT 57.691 33.333 0.73 2.98 45.67 3.01
298 299 8.504409 TCTAAATAAGGATAAAATTCCCCGGAA 58.496 33.333 0.73 0.00 36.35 4.30
299 300 7.940688 GTCTAAATAAGGATAAAATTCCCCGGA 59.059 37.037 0.73 0.00 36.35 5.14
300 301 7.942894 AGTCTAAATAAGGATAAAATTCCCCGG 59.057 37.037 0.00 0.00 36.35 5.73
301 302 8.919777 AGTCTAAATAAGGATAAAATTCCCCG 57.080 34.615 0.00 0.00 36.35 5.73
308 309 9.221933 TCGCACAAAGTCTAAATAAGGATAAAA 57.778 29.630 0.00 0.00 0.00 1.52
309 310 8.780846 TCGCACAAAGTCTAAATAAGGATAAA 57.219 30.769 0.00 0.00 0.00 1.40
310 311 7.011109 GCTCGCACAAAGTCTAAATAAGGATAA 59.989 37.037 0.00 0.00 0.00 1.75
311 312 6.479001 GCTCGCACAAAGTCTAAATAAGGATA 59.521 38.462 0.00 0.00 0.00 2.59
312 313 5.294552 GCTCGCACAAAGTCTAAATAAGGAT 59.705 40.000 0.00 0.00 0.00 3.24
313 314 4.630069 GCTCGCACAAAGTCTAAATAAGGA 59.370 41.667 0.00 0.00 0.00 3.36
314 315 4.391830 TGCTCGCACAAAGTCTAAATAAGG 59.608 41.667 0.00 0.00 0.00 2.69
315 316 5.530519 TGCTCGCACAAAGTCTAAATAAG 57.469 39.130 0.00 0.00 0.00 1.73
316 317 5.411361 ACATGCTCGCACAAAGTCTAAATAA 59.589 36.000 0.00 0.00 0.00 1.40
317 318 4.935205 ACATGCTCGCACAAAGTCTAAATA 59.065 37.500 0.00 0.00 0.00 1.40
318 319 3.753272 ACATGCTCGCACAAAGTCTAAAT 59.247 39.130 0.00 0.00 0.00 1.40
319 320 3.058983 CACATGCTCGCACAAAGTCTAAA 60.059 43.478 0.00 0.00 0.00 1.85
320 321 2.480037 CACATGCTCGCACAAAGTCTAA 59.520 45.455 0.00 0.00 0.00 2.10
321 322 2.068519 CACATGCTCGCACAAAGTCTA 58.931 47.619 0.00 0.00 0.00 2.59
322 323 0.870393 CACATGCTCGCACAAAGTCT 59.130 50.000 0.00 0.00 0.00 3.24
323 324 0.727122 GCACATGCTCGCACAAAGTC 60.727 55.000 0.00 0.00 38.21 3.01
324 325 1.283793 GCACATGCTCGCACAAAGT 59.716 52.632 0.00 0.00 38.21 2.66
325 326 1.794785 CGCACATGCTCGCACAAAG 60.795 57.895 1.82 0.00 39.32 2.77
326 327 2.057654 AACGCACATGCTCGCACAAA 62.058 50.000 1.82 0.00 39.32 2.83
327 328 2.057654 AAACGCACATGCTCGCACAA 62.058 50.000 1.82 0.00 39.32 3.33
328 329 2.442561 GAAACGCACATGCTCGCACA 62.443 55.000 1.82 0.00 39.32 4.57
329 330 1.793613 GAAACGCACATGCTCGCAC 60.794 57.895 1.82 0.00 39.32 5.34
330 331 1.960763 AGAAACGCACATGCTCGCA 60.961 52.632 1.82 0.00 39.32 5.10
331 332 1.510623 CAGAAACGCACATGCTCGC 60.511 57.895 1.82 0.13 39.32 5.03
332 333 0.451628 CACAGAAACGCACATGCTCG 60.452 55.000 1.82 5.76 39.32 5.03
333 334 0.867746 TCACAGAAACGCACATGCTC 59.132 50.000 1.82 0.00 39.32 4.26
334 335 0.588252 GTCACAGAAACGCACATGCT 59.412 50.000 1.82 0.00 39.32 3.79
335 336 0.722469 CGTCACAGAAACGCACATGC 60.722 55.000 0.00 0.00 32.84 4.06
336 337 0.581529 ACGTCACAGAAACGCACATG 59.418 50.000 0.00 0.00 43.76 3.21
337 338 0.581529 CACGTCACAGAAACGCACAT 59.418 50.000 0.00 0.00 43.76 3.21
338 339 0.738063 ACACGTCACAGAAACGCACA 60.738 50.000 0.00 0.00 43.76 4.57
339 340 0.315059 CACACGTCACAGAAACGCAC 60.315 55.000 0.00 0.00 43.76 5.34
340 341 0.738063 ACACACGTCACAGAAACGCA 60.738 50.000 0.00 0.00 43.76 5.24
341 342 0.315059 CACACACGTCACAGAAACGC 60.315 55.000 0.00 0.00 43.76 4.84
342 343 0.996462 ACACACACGTCACAGAAACG 59.004 50.000 0.00 0.00 45.37 3.60
343 344 2.268298 AGACACACACGTCACAGAAAC 58.732 47.619 0.00 0.00 38.43 2.78
344 345 2.665649 AGACACACACGTCACAGAAA 57.334 45.000 0.00 0.00 38.43 2.52
345 346 2.540157 CGTAGACACACACGTCACAGAA 60.540 50.000 0.00 0.00 38.43 3.02
346 347 1.003223 CGTAGACACACACGTCACAGA 60.003 52.381 0.00 0.00 38.43 3.41
347 348 1.395670 CGTAGACACACACGTCACAG 58.604 55.000 0.00 0.00 38.43 3.66
348 349 0.593008 GCGTAGACACACACGTCACA 60.593 55.000 0.00 0.00 40.25 3.58
349 350 1.273455 GGCGTAGACACACACGTCAC 61.273 60.000 0.00 0.00 42.15 3.67
350 351 1.008194 GGCGTAGACACACACGTCA 60.008 57.895 0.00 0.00 42.15 4.35
351 352 2.078914 CGGCGTAGACACACACGTC 61.079 63.158 0.00 0.00 40.25 4.34
352 353 1.859427 ATCGGCGTAGACACACACGT 61.859 55.000 6.85 0.00 40.25 4.49
353 354 1.132199 GATCGGCGTAGACACACACG 61.132 60.000 6.85 0.00 41.04 4.49
354 355 1.132199 CGATCGGCGTAGACACACAC 61.132 60.000 7.38 0.00 27.25 3.82
355 356 1.135939 CGATCGGCGTAGACACACA 59.864 57.895 7.38 0.00 27.25 3.72
356 357 1.585521 CCGATCGGCGTAGACACAC 60.586 63.158 23.37 0.00 38.67 3.82
357 358 2.767445 CCCGATCGGCGTAGACACA 61.767 63.158 29.12 0.00 38.67 3.72
358 359 2.025727 CCCGATCGGCGTAGACAC 59.974 66.667 29.12 0.00 38.67 3.67
378 379 3.643978 GACCATCTCATGCCGCGC 61.644 66.667 0.00 0.00 0.00 6.86
379 380 2.969238 GGACCATCTCATGCCGCG 60.969 66.667 0.00 0.00 0.00 6.46
380 381 2.592861 GGGACCATCTCATGCCGC 60.593 66.667 0.00 0.00 0.00 6.53
381 382 1.227764 CTGGGACCATCTCATGCCG 60.228 63.158 0.00 0.00 0.00 5.69
382 383 1.527844 GCTGGGACCATCTCATGCC 60.528 63.158 0.00 0.00 0.00 4.40
383 384 0.818445 CTGCTGGGACCATCTCATGC 60.818 60.000 0.00 0.00 0.00 4.06
384 385 0.835276 TCTGCTGGGACCATCTCATG 59.165 55.000 0.00 0.00 0.00 3.07
385 386 0.835941 GTCTGCTGGGACCATCTCAT 59.164 55.000 0.00 0.00 0.00 2.90
386 387 0.545071 TGTCTGCTGGGACCATCTCA 60.545 55.000 0.00 0.00 35.54 3.27
387 388 0.107945 GTGTCTGCTGGGACCATCTC 60.108 60.000 0.00 0.00 35.54 2.75
388 389 1.892819 CGTGTCTGCTGGGACCATCT 61.893 60.000 0.00 0.00 35.54 2.90
389 390 1.448540 CGTGTCTGCTGGGACCATC 60.449 63.158 0.00 0.00 35.54 3.51
390 391 2.665000 CGTGTCTGCTGGGACCAT 59.335 61.111 0.00 0.00 35.54 3.55
391 392 3.625897 CCGTGTCTGCTGGGACCA 61.626 66.667 0.00 0.00 35.54 4.02
393 394 4.314440 TGCCGTGTCTGCTGGGAC 62.314 66.667 0.00 0.00 36.81 4.46
394 395 4.314440 GTGCCGTGTCTGCTGGGA 62.314 66.667 0.00 0.00 0.00 4.37
395 396 4.624364 TGTGCCGTGTCTGCTGGG 62.624 66.667 0.00 0.00 0.00 4.45
396 397 3.046087 CTGTGCCGTGTCTGCTGG 61.046 66.667 0.00 0.00 0.00 4.85
397 398 3.720193 GCTGTGCCGTGTCTGCTG 61.720 66.667 0.00 0.00 0.00 4.41
398 399 4.240103 TGCTGTGCCGTGTCTGCT 62.240 61.111 0.00 0.00 0.00 4.24
399 400 4.017877 GTGCTGTGCCGTGTCTGC 62.018 66.667 0.00 0.00 0.00 4.26
400 401 2.280389 AGTGCTGTGCCGTGTCTG 60.280 61.111 0.00 0.00 0.00 3.51
401 402 1.744320 TACAGTGCTGTGCCGTGTCT 61.744 55.000 14.44 0.00 44.63 3.41
402 403 1.300620 TACAGTGCTGTGCCGTGTC 60.301 57.895 14.44 0.00 44.63 3.67
403 404 1.594293 GTACAGTGCTGTGCCGTGT 60.594 57.895 14.44 0.00 44.63 4.49
404 405 2.657757 CGTACAGTGCTGTGCCGTG 61.658 63.158 14.44 0.00 44.63 4.94
405 406 2.355837 CGTACAGTGCTGTGCCGT 60.356 61.111 14.44 0.00 44.63 5.68
406 407 3.112075 CCGTACAGTGCTGTGCCG 61.112 66.667 14.44 14.66 44.63 5.69
407 408 3.423154 GCCGTACAGTGCTGTGCC 61.423 66.667 14.44 4.78 44.63 5.01
408 409 3.777925 CGCCGTACAGTGCTGTGC 61.778 66.667 14.44 12.04 44.63 4.57
409 410 2.049526 TCGCCGTACAGTGCTGTG 60.050 61.111 14.44 0.03 44.63 3.66
410 411 2.049433 GTCGCCGTACAGTGCTGT 60.049 61.111 9.90 9.90 46.87 4.40
411 412 3.172575 CGTCGCCGTACAGTGCTG 61.173 66.667 0.00 0.00 0.00 4.41
427 428 2.202362 CTCTGGTCGCTCGTCACG 60.202 66.667 0.00 0.00 0.00 4.35
435 436 2.124693 CCCTCTCCTCTCTGGTCGC 61.125 68.421 0.00 0.00 37.07 5.19
441 442 1.022903 ATTGGGTCCCTCTCCTCTCT 58.977 55.000 10.00 0.00 0.00 3.10
442 443 1.419381 GATTGGGTCCCTCTCCTCTC 58.581 60.000 10.00 0.00 0.00 3.20
443 444 0.030603 GGATTGGGTCCCTCTCCTCT 60.031 60.000 17.70 0.00 41.50 3.69
444 445 1.403687 CGGATTGGGTCCCTCTCCTC 61.404 65.000 20.75 7.25 44.77 3.71
445 446 1.383248 CGGATTGGGTCCCTCTCCT 60.383 63.158 20.75 0.00 44.77 3.69
446 447 2.444256 CCGGATTGGGTCCCTCTCC 61.444 68.421 10.00 13.62 44.77 3.71
505 516 3.186047 CGCCTCGTTGGGTTAGCG 61.186 66.667 0.00 0.00 37.39 4.26
625 654 4.016706 GTGGGGTGACGGGGTGAG 62.017 72.222 0.00 0.00 0.00 3.51
689 755 1.580942 GGCAGTGTGTACGTCCGTA 59.419 57.895 0.00 0.00 0.00 4.02
690 756 2.337532 GGCAGTGTGTACGTCCGT 59.662 61.111 0.00 0.00 0.00 4.69
691 757 2.803670 CGGCAGTGTGTACGTCCG 60.804 66.667 0.00 0.00 39.08 4.79
692 758 2.431942 CCGGCAGTGTGTACGTCC 60.432 66.667 0.00 0.00 0.00 4.79
693 759 3.110178 GCCGGCAGTGTGTACGTC 61.110 66.667 24.80 0.00 0.00 4.34
796 864 1.148498 CGTATCCCTTCCCTTGGCC 59.852 63.158 0.00 0.00 0.00 5.36
806 874 3.967335 GCTCGCGCTCGTATCCCT 61.967 66.667 5.56 0.00 36.96 4.20
817 885 4.335584 GATCTCCTCCGGCTCGCG 62.336 72.222 0.00 0.00 0.00 5.87
818 886 4.335584 CGATCTCCTCCGGCTCGC 62.336 72.222 0.00 0.00 0.00 5.03
819 887 2.592001 TCGATCTCCTCCGGCTCG 60.592 66.667 0.00 0.00 0.00 5.03
855 926 0.615850 GTCTTCCACAAGGAGAGGGG 59.384 60.000 0.00 0.00 46.74 4.79
858 929 0.615850 GGGGTCTTCCACAAGGAGAG 59.384 60.000 0.00 0.00 46.74 3.20
861 932 2.221299 CGGGGGTCTTCCACAAGGA 61.221 63.158 0.00 0.00 39.52 3.36
974 1065 2.359975 GGTTCCCCAGAAGCGGTG 60.360 66.667 0.00 0.00 40.41 4.94
1413 1974 6.865726 GCTGTATGATTGATCGAGTTGAGTAT 59.134 38.462 0.00 0.00 0.00 2.12
1421 1982 2.983136 GTCGGCTGTATGATTGATCGAG 59.017 50.000 0.00 0.00 0.00 4.04
1424 1985 4.250116 AGAGTCGGCTGTATGATTGATC 57.750 45.455 0.00 0.00 0.00 2.92
1433 1998 2.025155 GATCAGGAAGAGTCGGCTGTA 58.975 52.381 0.00 0.00 0.00 2.74
1441 2006 2.476199 CTCTTGGGGATCAGGAAGAGT 58.524 52.381 14.37 0.00 37.65 3.24
1452 2017 4.285790 AGGGGTGGCTCTTGGGGA 62.286 66.667 0.00 0.00 0.00 4.81
1493 2089 7.069208 TCAGTAGCAGATATCACTGTCAAATCT 59.931 37.037 16.35 0.00 39.50 2.40
1515 2111 9.807649 GCAAAATTATCCAGTTCATAATTCAGT 57.192 29.630 0.00 0.00 36.03 3.41
1554 2154 2.551270 CGCAGACGTTTCAGGCAC 59.449 61.111 0.00 0.00 33.53 5.01
1567 2167 2.138320 GTCCCATATCATCACACGCAG 58.862 52.381 0.00 0.00 0.00 5.18
1574 2174 8.536340 TGAAATTGAAATGTCCCATATCATCA 57.464 30.769 0.00 0.00 0.00 3.07
1576 2176 8.543293 ACTGAAATTGAAATGTCCCATATCAT 57.457 30.769 0.00 0.00 0.00 2.45
1577 2177 7.959658 ACTGAAATTGAAATGTCCCATATCA 57.040 32.000 0.00 0.00 0.00 2.15
1583 2183 7.542130 GTGTTCATACTGAAATTGAAATGTCCC 59.458 37.037 0.00 0.00 38.22 4.46
1584 2184 8.299570 AGTGTTCATACTGAAATTGAAATGTCC 58.700 33.333 0.00 0.00 38.22 4.02
1615 2215 8.712228 ACTCCTCCATGTTTTCTAAAGATTTT 57.288 30.769 0.00 0.00 0.00 1.82
1616 2216 9.981460 ATACTCCTCCATGTTTTCTAAAGATTT 57.019 29.630 0.00 0.00 0.00 2.17
1617 2217 9.620259 GATACTCCTCCATGTTTTCTAAAGATT 57.380 33.333 0.00 0.00 0.00 2.40
1618 2218 8.772250 TGATACTCCTCCATGTTTTCTAAAGAT 58.228 33.333 0.00 0.00 0.00 2.40
1619 2219 8.146053 TGATACTCCTCCATGTTTTCTAAAGA 57.854 34.615 0.00 0.00 0.00 2.52
1620 2220 7.011857 GCTGATACTCCTCCATGTTTTCTAAAG 59.988 40.741 0.00 0.00 0.00 1.85
1621 2221 6.823689 GCTGATACTCCTCCATGTTTTCTAAA 59.176 38.462 0.00 0.00 0.00 1.85
1622 2222 6.349300 GCTGATACTCCTCCATGTTTTCTAA 58.651 40.000 0.00 0.00 0.00 2.10
1623 2223 5.163301 GGCTGATACTCCTCCATGTTTTCTA 60.163 44.000 0.00 0.00 0.00 2.10
1633 2236 4.040936 TCTATCTGGCTGATACTCCTCC 57.959 50.000 9.72 0.00 36.65 4.30
1661 2264 0.968405 TGAAATGAAAGCCAGCCCAC 59.032 50.000 0.00 0.00 0.00 4.61
1715 2322 1.334869 AGCTTGTCTTTTCGCAACTGG 59.665 47.619 0.00 0.00 0.00 4.00
1773 2414 8.638685 AATATGAAATGAAGAAATTTGCCTCG 57.361 30.769 0.00 0.00 29.89 4.63
1774 2415 9.590451 TGAATATGAAATGAAGAAATTTGCCTC 57.410 29.630 0.00 0.00 29.89 4.70
1776 2417 8.323140 CGTGAATATGAAATGAAGAAATTTGCC 58.677 33.333 0.00 0.00 29.89 4.52
1781 2422 7.065803 ACGGACGTGAATATGAAATGAAGAAAT 59.934 33.333 0.00 0.00 0.00 2.17
1802 2444 4.693566 TCATAACATTGTGGAAGAACGGAC 59.306 41.667 0.00 0.00 0.00 4.79
1896 2538 3.117491 TCTTCTCAGTCCACTTTGCTG 57.883 47.619 0.00 0.00 0.00 4.41
1908 2551 8.722394 GTTTTCCCAACTTTACTATCTTCTCAG 58.278 37.037 0.00 0.00 0.00 3.35
1926 2569 1.181786 GATGCATTCCCGTTTTCCCA 58.818 50.000 0.00 0.00 0.00 4.37
1931 2574 0.676466 TCAGCGATGCATTCCCGTTT 60.676 50.000 0.00 0.00 0.00 3.60
1940 2583 0.878086 TGACACGTTTCAGCGATGCA 60.878 50.000 0.00 0.00 35.59 3.96
1941 2584 0.234625 TTGACACGTTTCAGCGATGC 59.765 50.000 4.36 0.00 35.59 3.91
1969 2612 0.392998 CCACCACCTACACAGATGGC 60.393 60.000 0.00 0.00 35.49 4.40
2053 2709 0.924090 GAGTCGACCATGACGCATTC 59.076 55.000 13.01 0.00 43.70 2.67
2058 2714 1.618861 GTCAAGAGTCGACCATGACG 58.381 55.000 22.23 0.00 43.70 4.35
2095 2754 3.773117 CCACAAACGATGGCTGTTC 57.227 52.632 0.00 0.00 0.00 3.18
2160 2824 2.089980 ACAATCATGGAGCAGCACTTC 58.910 47.619 0.00 0.00 0.00 3.01
2165 2829 2.615912 GGTAAGACAATCATGGAGCAGC 59.384 50.000 0.00 0.00 0.00 5.25
2208 2872 6.469275 GCGGAACTTCTAAATTGATGTTAAGC 59.531 38.462 0.00 0.00 35.43 3.09
2218 2884 7.547722 ACTTTTTGTTTGCGGAACTTCTAAATT 59.452 29.630 0.00 0.00 39.08 1.82
2221 2887 5.956642 ACTTTTTGTTTGCGGAACTTCTAA 58.043 33.333 0.00 0.00 39.08 2.10
2252 2926 8.659925 TTGGAGAATTAGTAAACAACAACGTA 57.340 30.769 0.00 0.00 0.00 3.57
2273 2947 6.015180 AGCTAGAAATTGCAAGAACAATTGGA 60.015 34.615 10.83 0.00 46.80 3.53
2274 2948 6.090358 CAGCTAGAAATTGCAAGAACAATTGG 59.910 38.462 10.83 0.00 46.80 3.16
2334 3052 2.919229 CAGAAGCAATGCCAACGAATTC 59.081 45.455 0.00 0.00 0.00 2.17
2340 3058 2.099756 GGTATCCAGAAGCAATGCCAAC 59.900 50.000 0.00 0.00 0.00 3.77
2490 3213 1.153647 CGCCGATGCCACTCTTGTA 60.154 57.895 0.00 0.00 0.00 2.41
2577 3300 4.988598 CTGGAGTTGGGCGTGCGT 62.989 66.667 0.00 0.00 0.00 5.24
2712 3435 0.031111 TGAACTCGATGGGGATCCCT 60.031 55.000 30.08 11.98 45.70 4.20
2771 3494 8.004585 AGTACGAAAATTCTGAAGTTAAGACG 57.995 34.615 3.30 9.70 0.00 4.18
2842 3566 4.092091 CGATCAAACTGAACCTTCACTAGC 59.908 45.833 0.00 0.00 32.90 3.42
2844 3568 4.282449 TCCGATCAAACTGAACCTTCACTA 59.718 41.667 0.00 0.00 32.90 2.74
2848 3572 5.292101 CACTATCCGATCAAACTGAACCTTC 59.708 44.000 0.00 0.00 0.00 3.46
2925 3649 1.372997 CGACCCGGAGTTGACAGTG 60.373 63.158 0.73 0.00 30.42 3.66
3000 3724 2.528127 ACACCGATGTCCACCCCA 60.528 61.111 0.00 0.00 31.55 4.96
3075 3799 1.131638 TGTCACCTTCCTGAAGCTGT 58.868 50.000 1.25 0.00 37.11 4.40
3084 3808 0.250513 CTAGCCTGGTGTCACCTTCC 59.749 60.000 22.56 10.31 39.58 3.46
3167 3891 2.300152 TGAAAGCTGGAGTAGTGACTGG 59.700 50.000 0.00 0.00 35.45 4.00
3219 3955 5.423610 TGAAACCCTGGATGAAAGAAAACAA 59.576 36.000 0.00 0.00 0.00 2.83
3226 3962 5.500234 TGTAGATGAAACCCTGGATGAAAG 58.500 41.667 0.00 0.00 0.00 2.62
3314 4050 1.014352 CTTTCGCCCGGTTGAATAGG 58.986 55.000 0.00 0.00 0.00 2.57
3317 4053 1.241315 CCACTTTCGCCCGGTTGAAT 61.241 55.000 0.00 0.00 0.00 2.57
3347 4083 4.040047 TGGACACCCTTGATATGATCAGT 58.960 43.478 0.09 0.00 40.94 3.41
3410 4146 1.300697 GGTGTCGAAGCAACGGACT 60.301 57.895 0.00 0.00 0.00 3.85
3554 4290 3.050275 GGCAGTGACAGCGGGAAC 61.050 66.667 0.00 0.00 0.00 3.62
3566 4302 4.463043 GGTACCTGAGGAGGCAGT 57.537 61.111 4.99 0.00 44.33 4.40
3653 4389 1.372251 CGGAGAATCATCGAGCCGG 60.372 63.158 0.00 0.00 36.59 6.13
3703 4439 9.026121 TCAATAAAATCCACCCTTTATCGAAAA 57.974 29.630 0.00 0.00 29.50 2.29
3706 4442 7.343357 AGTCAATAAAATCCACCCTTTATCGA 58.657 34.615 0.00 0.00 29.50 3.59
3762 4498 2.014010 AGCTGAGAGAGATCCCCATC 57.986 55.000 0.00 0.00 0.00 3.51
3766 4502 2.102925 CAGGAAAGCTGAGAGAGATCCC 59.897 54.545 0.00 0.00 0.00 3.85
3770 4506 4.352009 AGAATCAGGAAAGCTGAGAGAGA 58.648 43.478 0.00 0.00 34.04 3.10
3771 4507 4.441913 GGAGAATCAGGAAAGCTGAGAGAG 60.442 50.000 0.00 0.00 36.25 3.20
3772 4508 3.450457 GGAGAATCAGGAAAGCTGAGAGA 59.550 47.826 0.00 0.00 36.25 3.10
3773 4509 3.197333 TGGAGAATCAGGAAAGCTGAGAG 59.803 47.826 0.00 0.00 36.25 3.20
3794 4553 0.805322 CAGCGCTGCCTAGAGAACTG 60.805 60.000 26.68 0.00 0.00 3.16
3809 4568 3.119459 TCTCTAGGACAAACTAAGCAGCG 60.119 47.826 0.00 0.00 0.00 5.18
3890 4649 6.915544 TGATGTTCAGATGCTATGAAACTC 57.084 37.500 1.26 2.90 38.34 3.01
3891 4650 6.827251 ACATGATGTTCAGATGCTATGAAACT 59.173 34.615 0.00 0.00 38.34 2.66
3892 4651 7.024340 ACATGATGTTCAGATGCTATGAAAC 57.976 36.000 0.00 0.00 38.34 2.78
3893 4652 7.121611 ACAACATGATGTTCAGATGCTATGAAA 59.878 33.333 8.03 0.00 38.77 2.69
3958 4725 8.314751 AGGAAATGAGTAATATATGTTCCTCCG 58.685 37.037 2.97 0.00 39.48 4.63
3966 4733 8.438513 CGAGCACAAGGAAATGAGTAATATATG 58.561 37.037 0.00 0.00 0.00 1.78
3988 4755 2.486966 GCAATTGAGCACCCGAGC 59.513 61.111 10.34 0.00 0.00 5.03
4139 4906 3.214328 ACAAAACAGCAAGACCAGTAGG 58.786 45.455 0.00 0.00 42.21 3.18
4150 4917 1.748493 GGTCCTCACAACAAAACAGCA 59.252 47.619 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.