Multiple sequence alignment - TraesCS5A01G263700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G263700 chr5A 100.000 3983 0 0 1 3983 476434047 476438029 0.000000e+00 7356.0
1 TraesCS5A01G263700 chr5A 100.000 1923 0 0 4396 6318 476438442 476440364 0.000000e+00 3552.0
2 TraesCS5A01G263700 chr5A 77.832 1033 163 44 1994 2996 476457000 476457996 4.250000e-161 579.0
3 TraesCS5A01G263700 chr5A 81.524 617 63 29 943 1532 476454432 476455024 1.600000e-125 460.0
4 TraesCS5A01G263700 chr5A 88.252 349 29 5 1010 1347 476460813 476461160 2.120000e-109 407.0
5 TraesCS5A01G263700 chr5A 79.032 496 81 11 2242 2736 476463285 476463758 1.020000e-82 318.0
6 TraesCS5A01G263700 chr5A 83.832 334 49 5 5670 6003 476459330 476459658 4.760000e-81 313.0
7 TraesCS5A01G263700 chr5A 78.906 256 35 13 2753 2999 476465306 476465551 8.480000e-34 156.0
8 TraesCS5A01G263700 chr5A 77.698 278 29 16 6070 6315 476459877 476460153 8.540000e-29 139.0
9 TraesCS5A01G263700 chr5D 90.424 2193 143 32 818 2999 375063514 375065650 0.000000e+00 2824.0
10 TraesCS5A01G263700 chr5D 93.840 1737 87 13 4595 6318 375065699 375067428 0.000000e+00 2597.0
11 TraesCS5A01G263700 chr5D 78.057 916 150 35 2105 2996 375071124 375072012 1.210000e-146 531.0
12 TraesCS5A01G263700 chr5D 85.634 355 33 9 1010 1347 375069746 375070099 2.170000e-94 357.0
13 TraesCS5A01G263700 chr5D 77.458 590 97 22 2152 2736 375184236 375184794 2.840000e-83 320.0
14 TraesCS5A01G263700 chr5D 77.458 590 96 23 2152 2736 375166398 375166955 1.020000e-82 318.0
15 TraesCS5A01G263700 chr5D 83.533 334 50 5 5670 6003 375073347 375073675 2.210000e-79 307.0
16 TraesCS5A01G263700 chr5D 84.921 252 30 6 6070 6315 375073894 375074143 1.360000e-61 248.0
17 TraesCS5A01G263700 chr5D 79.784 371 41 16 1082 1421 375144287 375144654 8.190000e-59 239.0
18 TraesCS5A01G263700 chr5B 94.997 1739 67 12 4595 6318 447580321 447582054 0.000000e+00 2712.0
19 TraesCS5A01G263700 chr5B 92.962 1094 47 6 1906 2999 447579210 447580273 0.000000e+00 1567.0
20 TraesCS5A01G263700 chr5B 87.440 621 55 12 959 1570 447578225 447578831 0.000000e+00 693.0
21 TraesCS5A01G263700 chr5B 79.086 1028 153 44 1995 2996 447600825 447601816 0.000000e+00 651.0
22 TraesCS5A01G263700 chr5B 86.648 352 28 8 1010 1347 447791414 447791760 7.740000e-99 372.0
23 TraesCS5A01G263700 chr5B 93.033 244 16 1 1635 1878 447578862 447579104 7.790000e-94 355.0
24 TraesCS5A01G263700 chr5B 78.261 598 95 22 2144 2736 447794033 447794600 1.010000e-92 351.0
25 TraesCS5A01G263700 chr5B 84.659 352 39 7 1010 1347 447599353 447599703 2.820000e-88 337.0
26 TraesCS5A01G263700 chr5B 83.832 334 50 3 5670 6003 447603360 447603689 1.320000e-81 315.0
27 TraesCS5A01G263700 chr5B 87.251 251 26 4 6070 6315 447603870 447604119 1.340000e-71 281.0
28 TraesCS5A01G263700 chr5B 84.390 205 29 2 6072 6274 447831554 447831757 1.390000e-46 198.0
29 TraesCS5A01G263700 chr5B 83.234 167 23 2 2835 2996 447829152 447829318 1.420000e-31 148.0
30 TraesCS5A01G263700 chr2B 97.780 991 12 2 2998 3981 667256037 667257024 0.000000e+00 1700.0
31 TraesCS5A01G263700 chr2B 97.273 990 20 1 3001 3983 52411535 52410546 0.000000e+00 1672.0
32 TraesCS5A01G263700 chr2B 89.831 59 4 1 1568 1624 106147793 106147851 2.440000e-09 75.0
33 TraesCS5A01G263700 chr6B 97.368 988 19 1 2998 3978 699983002 699983989 0.000000e+00 1674.0
34 TraesCS5A01G263700 chr3B 97.551 980 19 2 2996 3975 750467670 750466696 0.000000e+00 1672.0
35 TraesCS5A01G263700 chr3B 97.983 942 12 1 2999 3933 829033344 829032403 0.000000e+00 1628.0
36 TraesCS5A01G263700 chr3B 93.238 562 33 5 1 558 747209216 747208656 0.000000e+00 822.0
37 TraesCS5A01G263700 chr3B 92.883 562 35 5 1 558 747152091 747151531 0.000000e+00 811.0
38 TraesCS5A01G263700 chr1A 96.797 999 22 3 2994 3983 16866497 16865500 0.000000e+00 1659.0
39 TraesCS5A01G263700 chr1A 95.918 49 2 0 1567 1615 131963588 131963636 5.250000e-11 80.5
40 TraesCS5A01G263700 chr4B 96.787 996 25 1 2995 3983 3705037 3706032 0.000000e+00 1655.0
41 TraesCS5A01G263700 chr4B 92.864 995 62 7 2997 3983 68661660 68660667 0.000000e+00 1435.0
42 TraesCS5A01G263700 chrUn 97.128 975 21 1 3016 3983 35476266 35477240 0.000000e+00 1639.0
43 TraesCS5A01G263700 chr1B 91.374 997 73 10 2998 3983 564736627 564735633 0.000000e+00 1352.0
44 TraesCS5A01G263700 chr1B 93.393 560 31 5 1 556 327339821 327340378 0.000000e+00 824.0
45 TraesCS5A01G263700 chr1B 85.484 124 18 0 1195 1318 641529032 641529155 5.140000e-26 130.0
46 TraesCS5A01G263700 chr1B 97.826 46 0 1 1568 1612 466926243 466926198 1.890000e-10 78.7
47 TraesCS5A01G263700 chr7D 89.091 990 78 13 3002 3983 102728590 102729557 0.000000e+00 1203.0
48 TraesCS5A01G263700 chr7D 94.614 557 26 4 3 555 213444021 213443465 0.000000e+00 859.0
49 TraesCS5A01G263700 chr7D 93.560 559 32 4 1 555 421832108 421832666 0.000000e+00 830.0
50 TraesCS5A01G263700 chr7D 94.000 50 2 1 1559 1608 164195901 164195949 2.440000e-09 75.0
51 TraesCS5A01G263700 chr7B 88.900 991 82 10 3001 3983 746159315 746158345 0.000000e+00 1195.0
52 TraesCS5A01G263700 chr7B 84.127 126 18 2 1194 1318 19888218 19888342 3.090000e-23 121.0
53 TraesCS5A01G263700 chr7B 94.231 52 2 1 1562 1612 107127393 107127444 1.890000e-10 78.7
54 TraesCS5A01G263700 chr4D 93.907 558 28 6 1 554 308568134 308567579 0.000000e+00 837.0
55 TraesCS5A01G263700 chr4D 92.895 563 35 5 1 558 227579872 227580434 0.000000e+00 813.0
56 TraesCS5A01G263700 chr4D 97.872 47 0 1 1567 1612 307492997 307493043 5.250000e-11 80.5
57 TraesCS5A01G263700 chr3A 93.190 558 34 4 1 554 51281816 51282373 0.000000e+00 817.0
58 TraesCS5A01G263700 chr3A 96.000 50 1 1 1563 1612 45603265 45603313 5.250000e-11 80.5
59 TraesCS5A01G263700 chr7A 93.011 558 35 4 1 554 721930113 721930670 0.000000e+00 811.0
60 TraesCS5A01G263700 chr2D 88.583 254 20 6 3738 3983 620905545 620905797 3.700000e-77 300.0
61 TraesCS5A01G263700 chr2D 89.655 145 8 5 3846 3983 72650041 72650185 1.810000e-40 178.0
62 TraesCS5A01G263700 chr6D 100.000 45 0 0 1568 1612 245567973 245567929 4.060000e-12 84.2
63 TraesCS5A01G263700 chr6D 97.826 46 1 0 1567 1612 353812347 353812302 5.250000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G263700 chr5A 476434047 476440364 6317 False 5454.000000 7356 100.000000 1 6318 2 chr5A.!!$F1 6317
1 TraesCS5A01G263700 chr5A 476454432 476465551 11119 False 338.857143 579 81.010857 943 6315 7 chr5A.!!$F2 5372
2 TraesCS5A01G263700 chr5D 375063514 375074143 10629 False 1144.000000 2824 86.068167 818 6318 6 chr5D.!!$F4 5500
3 TraesCS5A01G263700 chr5D 375184236 375184794 558 False 320.000000 320 77.458000 2152 2736 1 chr5D.!!$F3 584
4 TraesCS5A01G263700 chr5D 375166398 375166955 557 False 318.000000 318 77.458000 2152 2736 1 chr5D.!!$F2 584
5 TraesCS5A01G263700 chr5B 447578225 447582054 3829 False 1331.750000 2712 92.108000 959 6318 4 chr5B.!!$F1 5359
6 TraesCS5A01G263700 chr5B 447599353 447604119 4766 False 396.000000 651 83.707000 1010 6315 4 chr5B.!!$F2 5305
7 TraesCS5A01G263700 chr5B 447791414 447794600 3186 False 361.500000 372 82.454500 1010 2736 2 chr5B.!!$F3 1726
8 TraesCS5A01G263700 chr2B 667256037 667257024 987 False 1700.000000 1700 97.780000 2998 3981 1 chr2B.!!$F2 983
9 TraesCS5A01G263700 chr2B 52410546 52411535 989 True 1672.000000 1672 97.273000 3001 3983 1 chr2B.!!$R1 982
10 TraesCS5A01G263700 chr6B 699983002 699983989 987 False 1674.000000 1674 97.368000 2998 3978 1 chr6B.!!$F1 980
11 TraesCS5A01G263700 chr3B 750466696 750467670 974 True 1672.000000 1672 97.551000 2996 3975 1 chr3B.!!$R3 979
12 TraesCS5A01G263700 chr3B 829032403 829033344 941 True 1628.000000 1628 97.983000 2999 3933 1 chr3B.!!$R4 934
13 TraesCS5A01G263700 chr3B 747208656 747209216 560 True 822.000000 822 93.238000 1 558 1 chr3B.!!$R2 557
14 TraesCS5A01G263700 chr3B 747151531 747152091 560 True 811.000000 811 92.883000 1 558 1 chr3B.!!$R1 557
15 TraesCS5A01G263700 chr1A 16865500 16866497 997 True 1659.000000 1659 96.797000 2994 3983 1 chr1A.!!$R1 989
16 TraesCS5A01G263700 chr4B 3705037 3706032 995 False 1655.000000 1655 96.787000 2995 3983 1 chr4B.!!$F1 988
17 TraesCS5A01G263700 chr4B 68660667 68661660 993 True 1435.000000 1435 92.864000 2997 3983 1 chr4B.!!$R1 986
18 TraesCS5A01G263700 chrUn 35476266 35477240 974 False 1639.000000 1639 97.128000 3016 3983 1 chrUn.!!$F1 967
19 TraesCS5A01G263700 chr1B 564735633 564736627 994 True 1352.000000 1352 91.374000 2998 3983 1 chr1B.!!$R2 985
20 TraesCS5A01G263700 chr1B 327339821 327340378 557 False 824.000000 824 93.393000 1 556 1 chr1B.!!$F1 555
21 TraesCS5A01G263700 chr7D 102728590 102729557 967 False 1203.000000 1203 89.091000 3002 3983 1 chr7D.!!$F1 981
22 TraesCS5A01G263700 chr7D 213443465 213444021 556 True 859.000000 859 94.614000 3 555 1 chr7D.!!$R1 552
23 TraesCS5A01G263700 chr7D 421832108 421832666 558 False 830.000000 830 93.560000 1 555 1 chr7D.!!$F3 554
24 TraesCS5A01G263700 chr7B 746158345 746159315 970 True 1195.000000 1195 88.900000 3001 3983 1 chr7B.!!$R1 982
25 TraesCS5A01G263700 chr4D 308567579 308568134 555 True 837.000000 837 93.907000 1 554 1 chr4D.!!$R1 553
26 TraesCS5A01G263700 chr4D 227579872 227580434 562 False 813.000000 813 92.895000 1 558 1 chr4D.!!$F1 557
27 TraesCS5A01G263700 chr3A 51281816 51282373 557 False 817.000000 817 93.190000 1 554 1 chr3A.!!$F2 553
28 TraesCS5A01G263700 chr7A 721930113 721930670 557 False 811.000000 811 93.011000 1 554 1 chr7A.!!$F1 553

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
624 628 0.038251 CGGTGTGACTAGCAGCAAGA 60.038 55.000 0.00 0.00 34.37 3.02 F
669 673 0.170339 GAAAAAGGATCCAACGGCCG 59.830 55.000 26.86 26.86 0.00 6.13 F
723 727 0.175073 CCTAGCGTCCGCCTAAACTT 59.825 55.000 8.23 0.00 43.17 2.66 F
2484 5664 0.096454 CTCGTACGCTCGTGATGTCA 59.904 55.000 11.24 0.00 0.00 3.58 F
2744 5925 1.344065 TTCGCAAGGTAGGTCTGGAA 58.656 50.000 0.00 0.00 38.47 3.53 F
3679 6875 2.609610 TGGGCCCGTAAAGCTCCT 60.610 61.111 19.37 0.00 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1978 5061 0.318022 TGCATTTGTGCGTCTTGCTG 60.318 50.000 0.0 0.0 46.63 4.41 R
2247 5427 1.860641 TTTCATAGGACCTGCGGAGA 58.139 50.000 5.1 0.0 0.00 3.71 R
2713 5894 1.535649 CCTTGCGAAATGTGTTGTGCA 60.536 47.619 0.0 0.0 0.00 4.57 R
3285 6481 1.437772 CCTCTCGCCTCGTCGTGTAT 61.438 60.000 0.0 0.0 0.00 2.29 R
4537 7752 0.400670 ACAGAAGGATAGGAGGGGGC 60.401 60.000 0.0 0.0 0.00 5.80 R
5617 9292 0.404426 AAAGGTTAGGGTGGTGCTCC 59.596 55.000 0.0 0.0 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
251 253 2.502130 TGACCCTATACGCAATTGTCCA 59.498 45.455 7.40 0.00 0.00 4.02
384 388 5.923684 GGGTTTTTAAGTTTCGATCAATGCA 59.076 36.000 0.00 0.00 0.00 3.96
541 545 3.902162 TTCCGTCCGTTTCCGCTCG 62.902 63.158 0.00 0.00 0.00 5.03
546 550 1.665599 TCCGTTTCCGCTCGGTTTC 60.666 57.895 8.28 0.00 45.88 2.78
547 551 1.957186 CCGTTTCCGCTCGGTTTCA 60.957 57.895 8.28 0.00 41.58 2.69
548 552 1.296056 CCGTTTCCGCTCGGTTTCAT 61.296 55.000 8.28 0.00 41.58 2.57
549 553 0.094730 CGTTTCCGCTCGGTTTCATC 59.905 55.000 8.28 0.00 36.47 2.92
550 554 0.446616 GTTTCCGCTCGGTTTCATCC 59.553 55.000 8.28 0.00 36.47 3.51
551 555 0.675522 TTTCCGCTCGGTTTCATCCC 60.676 55.000 8.28 0.00 36.47 3.85
552 556 1.550130 TTCCGCTCGGTTTCATCCCT 61.550 55.000 8.28 0.00 36.47 4.20
553 557 0.685131 TCCGCTCGGTTTCATCCCTA 60.685 55.000 8.28 0.00 36.47 3.53
554 558 0.529992 CCGCTCGGTTTCATCCCTAC 60.530 60.000 0.00 0.00 0.00 3.18
555 559 0.460311 CGCTCGGTTTCATCCCTACT 59.540 55.000 0.00 0.00 0.00 2.57
556 560 1.802880 CGCTCGGTTTCATCCCTACTG 60.803 57.143 0.00 0.00 0.00 2.74
557 561 1.941325 CTCGGTTTCATCCCTACTGC 58.059 55.000 0.00 0.00 0.00 4.40
558 562 0.539986 TCGGTTTCATCCCTACTGCC 59.460 55.000 0.00 0.00 0.00 4.85
559 563 0.541863 CGGTTTCATCCCTACTGCCT 59.458 55.000 0.00 0.00 0.00 4.75
560 564 1.743772 CGGTTTCATCCCTACTGCCTG 60.744 57.143 0.00 0.00 0.00 4.85
561 565 1.282157 GGTTTCATCCCTACTGCCTGT 59.718 52.381 0.00 0.00 0.00 4.00
562 566 2.359900 GTTTCATCCCTACTGCCTGTG 58.640 52.381 0.00 0.00 0.00 3.66
563 567 0.911769 TTCATCCCTACTGCCTGTGG 59.088 55.000 0.00 0.00 0.00 4.17
601 605 1.499502 GCTCTTGCGTGCTTTCTCC 59.500 57.895 0.00 0.00 0.00 3.71
602 606 1.784062 CTCTTGCGTGCTTTCTCCG 59.216 57.895 0.00 0.00 0.00 4.63
603 607 0.946221 CTCTTGCGTGCTTTCTCCGT 60.946 55.000 0.00 0.00 0.00 4.69
604 608 1.205064 CTTGCGTGCTTTCTCCGTG 59.795 57.895 0.00 0.00 0.00 4.94
605 609 2.770587 CTTGCGTGCTTTCTCCGTGC 62.771 60.000 0.00 0.00 0.00 5.34
606 610 4.430423 GCGTGCTTTCTCCGTGCG 62.430 66.667 0.00 0.00 0.00 5.34
607 611 3.777925 CGTGCTTTCTCCGTGCGG 61.778 66.667 3.94 3.94 0.00 5.69
608 612 2.665185 GTGCTTTCTCCGTGCGGT 60.665 61.111 10.60 0.00 36.47 5.68
609 613 2.664851 TGCTTTCTCCGTGCGGTG 60.665 61.111 10.60 8.38 36.47 4.94
610 614 2.665185 GCTTTCTCCGTGCGGTGT 60.665 61.111 10.60 0.00 36.47 4.16
611 615 2.954753 GCTTTCTCCGTGCGGTGTG 61.955 63.158 10.60 3.12 36.47 3.82
612 616 1.300620 CTTTCTCCGTGCGGTGTGA 60.301 57.895 10.60 5.30 36.47 3.58
613 617 1.557443 CTTTCTCCGTGCGGTGTGAC 61.557 60.000 10.60 0.00 36.47 3.67
614 618 2.023414 TTTCTCCGTGCGGTGTGACT 62.023 55.000 10.60 0.00 36.47 3.41
615 619 1.174078 TTCTCCGTGCGGTGTGACTA 61.174 55.000 10.60 0.00 36.47 2.59
616 620 1.154016 CTCCGTGCGGTGTGACTAG 60.154 63.158 10.60 0.00 36.47 2.57
617 621 2.809601 CCGTGCGGTGTGACTAGC 60.810 66.667 1.93 0.00 0.00 3.42
618 622 2.049526 CGTGCGGTGTGACTAGCA 60.050 61.111 0.00 0.00 37.26 3.49
619 623 2.088763 CGTGCGGTGTGACTAGCAG 61.089 63.158 1.07 0.00 40.53 4.24
620 624 2.048222 TGCGGTGTGACTAGCAGC 60.048 61.111 0.00 0.00 34.39 5.25
621 625 2.048222 GCGGTGTGACTAGCAGCA 60.048 61.111 0.00 0.00 34.37 4.41
622 626 1.667830 GCGGTGTGACTAGCAGCAA 60.668 57.895 0.00 0.00 34.37 3.91
623 627 1.630244 GCGGTGTGACTAGCAGCAAG 61.630 60.000 0.00 0.00 34.37 4.01
624 628 0.038251 CGGTGTGACTAGCAGCAAGA 60.038 55.000 0.00 0.00 34.37 3.02
625 629 1.719600 GGTGTGACTAGCAGCAAGAG 58.280 55.000 0.00 0.00 34.80 2.85
626 630 1.273606 GGTGTGACTAGCAGCAAGAGA 59.726 52.381 0.00 0.00 34.80 3.10
627 631 2.289072 GGTGTGACTAGCAGCAAGAGAA 60.289 50.000 0.00 0.00 34.80 2.87
628 632 3.393800 GTGTGACTAGCAGCAAGAGAAA 58.606 45.455 0.00 0.00 0.00 2.52
629 633 3.431572 GTGTGACTAGCAGCAAGAGAAAG 59.568 47.826 0.00 0.00 0.00 2.62
630 634 2.999355 GTGACTAGCAGCAAGAGAAAGG 59.001 50.000 0.00 0.00 0.00 3.11
631 635 2.027745 TGACTAGCAGCAAGAGAAAGGG 60.028 50.000 0.00 0.00 0.00 3.95
632 636 2.234908 GACTAGCAGCAAGAGAAAGGGA 59.765 50.000 0.00 0.00 0.00 4.20
633 637 2.639839 ACTAGCAGCAAGAGAAAGGGAA 59.360 45.455 0.00 0.00 0.00 3.97
634 638 2.197283 AGCAGCAAGAGAAAGGGAAG 57.803 50.000 0.00 0.00 0.00 3.46
635 639 1.701847 AGCAGCAAGAGAAAGGGAAGA 59.298 47.619 0.00 0.00 0.00 2.87
636 640 2.107204 AGCAGCAAGAGAAAGGGAAGAA 59.893 45.455 0.00 0.00 0.00 2.52
637 641 2.887152 GCAGCAAGAGAAAGGGAAGAAA 59.113 45.455 0.00 0.00 0.00 2.52
638 642 3.319122 GCAGCAAGAGAAAGGGAAGAAAA 59.681 43.478 0.00 0.00 0.00 2.29
639 643 4.021632 GCAGCAAGAGAAAGGGAAGAAAAT 60.022 41.667 0.00 0.00 0.00 1.82
640 644 5.467705 CAGCAAGAGAAAGGGAAGAAAATG 58.532 41.667 0.00 0.00 0.00 2.32
641 645 5.242393 CAGCAAGAGAAAGGGAAGAAAATGA 59.758 40.000 0.00 0.00 0.00 2.57
642 646 6.015282 AGCAAGAGAAAGGGAAGAAAATGAT 58.985 36.000 0.00 0.00 0.00 2.45
643 647 6.071503 AGCAAGAGAAAGGGAAGAAAATGATG 60.072 38.462 0.00 0.00 0.00 3.07
644 648 6.071728 GCAAGAGAAAGGGAAGAAAATGATGA 60.072 38.462 0.00 0.00 0.00 2.92
645 649 7.536855 CAAGAGAAAGGGAAGAAAATGATGAG 58.463 38.462 0.00 0.00 0.00 2.90
646 650 6.186234 AGAGAAAGGGAAGAAAATGATGAGG 58.814 40.000 0.00 0.00 0.00 3.86
647 651 5.896963 AGAAAGGGAAGAAAATGATGAGGT 58.103 37.500 0.00 0.00 0.00 3.85
648 652 5.713861 AGAAAGGGAAGAAAATGATGAGGTG 59.286 40.000 0.00 0.00 0.00 4.00
649 653 3.973425 AGGGAAGAAAATGATGAGGTGG 58.027 45.455 0.00 0.00 0.00 4.61
650 654 3.026694 GGGAAGAAAATGATGAGGTGGG 58.973 50.000 0.00 0.00 0.00 4.61
651 655 3.309121 GGGAAGAAAATGATGAGGTGGGA 60.309 47.826 0.00 0.00 0.00 4.37
652 656 4.344104 GGAAGAAAATGATGAGGTGGGAA 58.656 43.478 0.00 0.00 0.00 3.97
653 657 4.772100 GGAAGAAAATGATGAGGTGGGAAA 59.228 41.667 0.00 0.00 0.00 3.13
654 658 5.245977 GGAAGAAAATGATGAGGTGGGAAAA 59.754 40.000 0.00 0.00 0.00 2.29
655 659 6.239572 GGAAGAAAATGATGAGGTGGGAAAAA 60.240 38.462 0.00 0.00 0.00 1.94
656 660 6.350629 AGAAAATGATGAGGTGGGAAAAAG 57.649 37.500 0.00 0.00 0.00 2.27
657 661 5.246883 AGAAAATGATGAGGTGGGAAAAAGG 59.753 40.000 0.00 0.00 0.00 3.11
658 662 4.402616 AATGATGAGGTGGGAAAAAGGA 57.597 40.909 0.00 0.00 0.00 3.36
659 663 4.614967 ATGATGAGGTGGGAAAAAGGAT 57.385 40.909 0.00 0.00 0.00 3.24
660 664 3.968265 TGATGAGGTGGGAAAAAGGATC 58.032 45.455 0.00 0.00 0.00 3.36
661 665 2.899303 TGAGGTGGGAAAAAGGATCC 57.101 50.000 2.48 2.48 36.16 3.36
662 666 2.069775 TGAGGTGGGAAAAAGGATCCA 58.930 47.619 15.82 0.00 38.80 3.41
663 667 2.448961 TGAGGTGGGAAAAAGGATCCAA 59.551 45.455 15.82 0.00 38.80 3.53
664 668 2.826128 GAGGTGGGAAAAAGGATCCAAC 59.174 50.000 15.82 0.00 39.76 3.77
665 669 1.544246 GGTGGGAAAAAGGATCCAACG 59.456 52.381 15.82 0.00 41.16 4.10
666 670 1.544246 GTGGGAAAAAGGATCCAACGG 59.456 52.381 15.82 0.00 38.80 4.44
667 671 0.530744 GGGAAAAAGGATCCAACGGC 59.469 55.000 15.82 0.00 38.80 5.68
668 672 0.530744 GGAAAAAGGATCCAACGGCC 59.469 55.000 15.82 5.87 36.92 6.13
669 673 0.170339 GAAAAAGGATCCAACGGCCG 59.830 55.000 26.86 26.86 0.00 6.13
670 674 0.538746 AAAAAGGATCCAACGGCCGT 60.539 50.000 28.70 28.70 0.00 5.68
671 675 1.241315 AAAAGGATCCAACGGCCGTG 61.241 55.000 34.95 24.51 0.00 4.94
672 676 4.778143 AGGATCCAACGGCCGTGC 62.778 66.667 34.95 14.61 0.00 5.34
692 696 3.897819 GCGACTAGCCGAATTTTGG 57.102 52.632 1.37 0.00 40.81 3.28
693 697 0.377203 GCGACTAGCCGAATTTTGGG 59.623 55.000 1.37 0.00 40.81 4.12
694 698 1.734163 CGACTAGCCGAATTTTGGGT 58.266 50.000 11.97 11.97 40.94 4.51
695 699 1.664151 CGACTAGCCGAATTTTGGGTC 59.336 52.381 10.67 5.73 38.39 4.46
696 700 1.664151 GACTAGCCGAATTTTGGGTCG 59.336 52.381 10.67 7.65 38.39 4.79
697 701 1.276989 ACTAGCCGAATTTTGGGTCGA 59.723 47.619 10.67 0.00 39.64 4.20
698 702 1.664151 CTAGCCGAATTTTGGGTCGAC 59.336 52.381 10.67 7.13 39.64 4.20
699 703 0.958876 AGCCGAATTTTGGGTCGACC 60.959 55.000 27.04 27.04 39.64 4.79
700 704 1.791662 CCGAATTTTGGGTCGACCG 59.208 57.895 27.68 13.44 44.64 4.79
701 705 1.641123 CCGAATTTTGGGTCGACCGG 61.641 60.000 27.68 18.41 44.64 5.28
702 706 1.504900 GAATTTTGGGTCGACCGGC 59.495 57.895 27.68 15.75 44.64 6.13
703 707 2.248274 GAATTTTGGGTCGACCGGCG 62.248 60.000 27.68 6.66 44.64 6.46
720 724 2.497770 GCCTAGCGTCCGCCTAAA 59.502 61.111 8.23 0.00 43.17 1.85
721 725 1.881709 GCCTAGCGTCCGCCTAAAC 60.882 63.158 8.23 0.00 43.17 2.01
722 726 1.814527 CCTAGCGTCCGCCTAAACT 59.185 57.895 8.23 0.00 43.17 2.66
723 727 0.175073 CCTAGCGTCCGCCTAAACTT 59.825 55.000 8.23 0.00 43.17 2.66
724 728 1.405121 CCTAGCGTCCGCCTAAACTTT 60.405 52.381 8.23 0.00 43.17 2.66
725 729 1.925185 CTAGCGTCCGCCTAAACTTTC 59.075 52.381 8.23 0.00 43.17 2.62
726 730 0.320697 AGCGTCCGCCTAAACTTTCT 59.679 50.000 8.23 0.00 43.17 2.52
727 731 0.720027 GCGTCCGCCTAAACTTTCTC 59.280 55.000 0.00 0.00 34.56 2.87
728 732 0.989890 CGTCCGCCTAAACTTTCTCG 59.010 55.000 0.00 0.00 0.00 4.04
729 733 1.668047 CGTCCGCCTAAACTTTCTCGT 60.668 52.381 0.00 0.00 0.00 4.18
730 734 1.991264 GTCCGCCTAAACTTTCTCGTC 59.009 52.381 0.00 0.00 0.00 4.20
731 735 1.067354 TCCGCCTAAACTTTCTCGTCC 60.067 52.381 0.00 0.00 0.00 4.79
732 736 1.356938 CGCCTAAACTTTCTCGTCCC 58.643 55.000 0.00 0.00 0.00 4.46
733 737 1.356938 GCCTAAACTTTCTCGTCCCG 58.643 55.000 0.00 0.00 0.00 5.14
734 738 1.337541 GCCTAAACTTTCTCGTCCCGT 60.338 52.381 0.00 0.00 0.00 5.28
735 739 2.334838 CCTAAACTTTCTCGTCCCGTG 58.665 52.381 0.00 0.00 0.00 4.94
736 740 2.029649 CCTAAACTTTCTCGTCCCGTGA 60.030 50.000 0.00 0.00 0.00 4.35
737 741 1.861971 AAACTTTCTCGTCCCGTGAC 58.138 50.000 0.00 0.00 38.18 3.67
738 742 0.748450 AACTTTCTCGTCCCGTGACA 59.252 50.000 0.00 0.00 41.85 3.58
739 743 0.748450 ACTTTCTCGTCCCGTGACAA 59.252 50.000 0.00 0.00 41.85 3.18
740 744 1.269621 ACTTTCTCGTCCCGTGACAAG 60.270 52.381 0.00 0.00 41.85 3.16
741 745 0.599204 TTTCTCGTCCCGTGACAAGC 60.599 55.000 0.00 0.00 41.85 4.01
742 746 1.740332 TTCTCGTCCCGTGACAAGCA 61.740 55.000 0.00 0.00 41.85 3.91
743 747 2.022129 CTCGTCCCGTGACAAGCAC 61.022 63.158 0.00 0.00 41.85 4.40
753 757 3.234596 GTGACAAGCACACGTAACTTC 57.765 47.619 0.00 0.00 46.91 3.01
754 758 2.605818 GTGACAAGCACACGTAACTTCA 59.394 45.455 0.00 0.00 46.91 3.02
755 759 2.863740 TGACAAGCACACGTAACTTCAG 59.136 45.455 0.00 0.00 0.00 3.02
756 760 2.864343 GACAAGCACACGTAACTTCAGT 59.136 45.455 0.00 0.00 0.00 3.41
757 761 3.267483 ACAAGCACACGTAACTTCAGTT 58.733 40.909 0.00 0.00 41.73 3.16
758 762 3.063452 ACAAGCACACGTAACTTCAGTTG 59.937 43.478 2.26 0.00 38.90 3.16
759 763 2.210116 AGCACACGTAACTTCAGTTGG 58.790 47.619 2.26 0.00 38.90 3.77
760 764 1.937899 GCACACGTAACTTCAGTTGGT 59.062 47.619 2.26 0.00 38.90 3.67
761 765 2.033151 GCACACGTAACTTCAGTTGGTC 60.033 50.000 2.26 0.00 38.90 4.02
762 766 3.191669 CACACGTAACTTCAGTTGGTCA 58.808 45.455 2.26 0.00 38.90 4.02
763 767 3.000925 CACACGTAACTTCAGTTGGTCAC 59.999 47.826 2.26 0.00 38.90 3.67
764 768 3.191669 CACGTAACTTCAGTTGGTCACA 58.808 45.455 2.26 0.00 38.90 3.58
765 769 3.245284 CACGTAACTTCAGTTGGTCACAG 59.755 47.826 2.26 0.00 38.90 3.66
766 770 3.118884 ACGTAACTTCAGTTGGTCACAGT 60.119 43.478 2.26 0.00 38.90 3.55
767 771 4.098349 ACGTAACTTCAGTTGGTCACAGTA 59.902 41.667 2.26 0.00 38.90 2.74
768 772 5.221382 ACGTAACTTCAGTTGGTCACAGTAT 60.221 40.000 2.26 0.00 38.90 2.12
769 773 6.016024 ACGTAACTTCAGTTGGTCACAGTATA 60.016 38.462 2.26 0.00 38.90 1.47
770 774 6.864685 CGTAACTTCAGTTGGTCACAGTATAA 59.135 38.462 2.26 0.00 38.90 0.98
771 775 7.544566 CGTAACTTCAGTTGGTCACAGTATAAT 59.455 37.037 2.26 0.00 38.90 1.28
772 776 7.907214 AACTTCAGTTGGTCACAGTATAATC 57.093 36.000 0.00 0.00 36.80 1.75
773 777 7.004555 ACTTCAGTTGGTCACAGTATAATCA 57.995 36.000 0.00 0.00 0.00 2.57
774 778 7.624549 ACTTCAGTTGGTCACAGTATAATCAT 58.375 34.615 0.00 0.00 0.00 2.45
775 779 7.550551 ACTTCAGTTGGTCACAGTATAATCATG 59.449 37.037 0.00 0.00 0.00 3.07
776 780 6.348498 TCAGTTGGTCACAGTATAATCATGG 58.652 40.000 0.00 0.00 0.00 3.66
777 781 6.070251 TCAGTTGGTCACAGTATAATCATGGT 60.070 38.462 0.00 0.00 0.00 3.55
778 782 7.125053 TCAGTTGGTCACAGTATAATCATGGTA 59.875 37.037 0.00 0.00 0.00 3.25
779 783 7.439356 CAGTTGGTCACAGTATAATCATGGTAG 59.561 40.741 0.00 0.00 0.00 3.18
780 784 6.419484 TGGTCACAGTATAATCATGGTAGG 57.581 41.667 0.00 0.00 0.00 3.18
781 785 5.903010 TGGTCACAGTATAATCATGGTAGGT 59.097 40.000 0.00 0.00 0.00 3.08
782 786 7.070629 TGGTCACAGTATAATCATGGTAGGTA 58.929 38.462 0.00 0.00 0.00 3.08
783 787 7.565768 TGGTCACAGTATAATCATGGTAGGTAA 59.434 37.037 0.00 0.00 0.00 2.85
784 788 7.871463 GGTCACAGTATAATCATGGTAGGTAAC 59.129 40.741 0.00 0.00 0.00 2.50
793 797 1.519246 GGTAGGTAACCTGTCCGCC 59.481 63.158 0.00 0.00 45.75 6.13
794 798 0.974525 GGTAGGTAACCTGTCCGCCT 60.975 60.000 0.00 0.00 45.75 5.52
795 799 0.175073 GTAGGTAACCTGTCCGCCTG 59.825 60.000 0.00 0.00 34.61 4.85
796 800 0.251922 TAGGTAACCTGTCCGCCTGT 60.252 55.000 0.00 0.00 34.61 4.00
797 801 1.375523 GGTAACCTGTCCGCCTGTG 60.376 63.158 0.00 0.00 0.00 3.66
798 802 1.370064 GTAACCTGTCCGCCTGTGT 59.630 57.895 0.00 0.00 0.00 3.72
799 803 0.949105 GTAACCTGTCCGCCTGTGTG 60.949 60.000 0.00 0.00 0.00 3.82
800 804 1.116536 TAACCTGTCCGCCTGTGTGA 61.117 55.000 0.00 0.00 0.00 3.58
801 805 2.047844 CCTGTCCGCCTGTGTGAG 60.048 66.667 0.00 0.00 0.00 3.51
802 806 2.574018 CCTGTCCGCCTGTGTGAGA 61.574 63.158 0.00 0.00 0.00 3.27
803 807 1.080230 CTGTCCGCCTGTGTGAGAG 60.080 63.158 0.00 0.00 0.00 3.20
804 808 1.810606 CTGTCCGCCTGTGTGAGAGT 61.811 60.000 0.00 0.00 0.00 3.24
805 809 0.538746 TGTCCGCCTGTGTGAGAGTA 60.539 55.000 0.00 0.00 0.00 2.59
806 810 0.601558 GTCCGCCTGTGTGAGAGTAA 59.398 55.000 0.00 0.00 0.00 2.24
807 811 1.204941 GTCCGCCTGTGTGAGAGTAAT 59.795 52.381 0.00 0.00 0.00 1.89
808 812 1.476891 TCCGCCTGTGTGAGAGTAATC 59.523 52.381 0.00 0.00 0.00 1.75
809 813 1.204704 CCGCCTGTGTGAGAGTAATCA 59.795 52.381 0.00 0.00 0.00 2.57
810 814 2.534298 CGCCTGTGTGAGAGTAATCAG 58.466 52.381 0.00 0.00 0.00 2.90
811 815 2.275318 GCCTGTGTGAGAGTAATCAGC 58.725 52.381 0.00 0.00 0.00 4.26
812 816 2.354103 GCCTGTGTGAGAGTAATCAGCA 60.354 50.000 0.00 0.00 0.00 4.41
813 817 3.866066 GCCTGTGTGAGAGTAATCAGCAA 60.866 47.826 0.00 0.00 0.00 3.91
814 818 4.318332 CCTGTGTGAGAGTAATCAGCAAA 58.682 43.478 0.00 0.00 0.00 3.68
815 819 4.153117 CCTGTGTGAGAGTAATCAGCAAAC 59.847 45.833 0.00 0.00 0.00 2.93
816 820 4.702831 TGTGTGAGAGTAATCAGCAAACA 58.297 39.130 5.34 5.34 0.00 2.83
825 829 6.595716 AGAGTAATCAGCAAACAGTAATCACC 59.404 38.462 0.00 0.00 0.00 4.02
827 831 5.633830 AATCAGCAAACAGTAATCACCTG 57.366 39.130 0.00 0.00 36.01 4.00
832 836 2.489329 CAAACAGTAATCACCTGCCCTG 59.511 50.000 0.00 0.00 33.09 4.45
835 839 0.916358 AGTAATCACCTGCCCTGCCT 60.916 55.000 0.00 0.00 0.00 4.75
836 840 0.749454 GTAATCACCTGCCCTGCCTG 60.749 60.000 0.00 0.00 0.00 4.85
842 846 2.586792 CTGCCCTGCCTGTCCTAC 59.413 66.667 0.00 0.00 0.00 3.18
847 851 1.528824 CCTGCCTGTCCTACCATGG 59.471 63.158 11.19 11.19 0.00 3.66
862 866 2.578021 ACCATGGTAGCTGGAATCACTT 59.422 45.455 18.10 0.00 37.22 3.16
863 867 2.947652 CCATGGTAGCTGGAATCACTTG 59.052 50.000 2.57 0.00 35.70 3.16
901 905 4.286291 CCCACCTCCATAAGTTAGATACCC 59.714 50.000 0.00 0.00 0.00 3.69
902 906 4.905456 CCACCTCCATAAGTTAGATACCCA 59.095 45.833 0.00 0.00 0.00 4.51
909 913 7.935405 TCCATAAGTTAGATACCCAAAACCTT 58.065 34.615 0.00 0.00 0.00 3.50
910 914 8.395605 TCCATAAGTTAGATACCCAAAACCTTT 58.604 33.333 0.00 0.00 0.00 3.11
911 915 8.683615 CCATAAGTTAGATACCCAAAACCTTTC 58.316 37.037 0.00 0.00 0.00 2.62
913 917 9.816787 ATAAGTTAGATACCCAAAACCTTTCAA 57.183 29.630 0.00 0.00 0.00 2.69
914 918 8.721133 AAGTTAGATACCCAAAACCTTTCAAT 57.279 30.769 0.00 0.00 0.00 2.57
915 919 8.721133 AGTTAGATACCCAAAACCTTTCAATT 57.279 30.769 0.00 0.00 0.00 2.32
916 920 8.803235 AGTTAGATACCCAAAACCTTTCAATTC 58.197 33.333 0.00 0.00 0.00 2.17
917 921 6.267496 AGATACCCAAAACCTTTCAATTCG 57.733 37.500 0.00 0.00 0.00 3.34
918 922 3.744238 ACCCAAAACCTTTCAATTCGG 57.256 42.857 0.00 0.00 0.00 4.30
919 923 3.035363 ACCCAAAACCTTTCAATTCGGT 58.965 40.909 0.00 0.00 0.00 4.69
920 924 3.181470 ACCCAAAACCTTTCAATTCGGTG 60.181 43.478 0.00 0.00 0.00 4.94
921 925 3.181470 CCCAAAACCTTTCAATTCGGTGT 60.181 43.478 0.00 0.00 0.00 4.16
922 926 4.438148 CCAAAACCTTTCAATTCGGTGTT 58.562 39.130 0.00 0.00 0.00 3.32
923 927 4.269844 CCAAAACCTTTCAATTCGGTGTTG 59.730 41.667 0.00 0.00 42.86 3.33
924 928 3.726291 AACCTTTCAATTCGGTGTTGG 57.274 42.857 0.00 0.00 0.00 3.77
925 929 2.938838 ACCTTTCAATTCGGTGTTGGA 58.061 42.857 0.00 0.00 0.00 3.53
926 930 3.496331 ACCTTTCAATTCGGTGTTGGAT 58.504 40.909 0.00 0.00 0.00 3.41
927 931 3.895041 ACCTTTCAATTCGGTGTTGGATT 59.105 39.130 0.00 0.00 0.00 3.01
934 938 2.380084 TCGGTGTTGGATTCTACTGC 57.620 50.000 0.00 0.00 0.00 4.40
938 942 2.744202 GGTGTTGGATTCTACTGCACAG 59.256 50.000 0.00 0.00 0.00 3.66
939 943 3.557054 GGTGTTGGATTCTACTGCACAGA 60.557 47.826 4.31 0.00 0.00 3.41
992 997 0.899019 AGGGAAAGAGAGAAGCCGTC 59.101 55.000 0.00 0.00 0.00 4.79
1018 1023 1.478105 CCATGGGTAAAGCTTCCTTGC 59.522 52.381 2.85 0.00 0.00 4.01
1019 1024 1.478105 CATGGGTAAAGCTTCCTTGCC 59.522 52.381 0.00 0.00 0.00 4.52
1033 1050 2.154798 CTTGCCGTTCCCGAGTCTCA 62.155 60.000 0.00 0.00 35.63 3.27
1177 1206 1.172175 CCCTGCAAGCTTCCTTCTTC 58.828 55.000 0.00 0.00 0.00 2.87
1224 1256 3.450115 GTGGACGAGGAGACGGGG 61.450 72.222 0.00 0.00 37.61 5.73
1347 1379 1.420430 TCGAAGTTGGTGAGACCCTT 58.580 50.000 0.00 0.00 37.50 3.95
1348 1380 1.766496 TCGAAGTTGGTGAGACCCTTT 59.234 47.619 0.00 0.00 37.50 3.11
1349 1381 2.967201 TCGAAGTTGGTGAGACCCTTTA 59.033 45.455 0.00 0.00 37.50 1.85
1350 1382 3.581332 TCGAAGTTGGTGAGACCCTTTAT 59.419 43.478 0.00 0.00 37.50 1.40
1351 1383 3.933332 CGAAGTTGGTGAGACCCTTTATC 59.067 47.826 0.00 0.00 37.50 1.75
1352 1384 3.611766 AGTTGGTGAGACCCTTTATCG 57.388 47.619 0.00 0.00 37.50 2.92
1415 1467 2.050985 GCTGCCGTTGCTGTCAAC 60.051 61.111 0.00 5.31 46.85 3.18
1425 1477 4.252971 GTTGCTGTCAACTACTACTGGA 57.747 45.455 7.42 0.00 46.81 3.86
1426 1478 4.238514 GTTGCTGTCAACTACTACTGGAG 58.761 47.826 7.42 0.00 46.81 3.86
1512 1615 2.432146 AGCTGAGCAAATCATCGGAGTA 59.568 45.455 7.39 0.00 37.28 2.59
1532 1635 9.273016 CGGAGTATGAAAATATGTATCAGGTTT 57.727 33.333 0.00 0.00 0.00 3.27
1554 1823 1.880894 GCCTTTTAACGGGCCTGTC 59.119 57.895 20.00 0.00 42.30 3.51
1595 2915 7.318141 TCCCTCCGTAAATAAATATAAGAGCG 58.682 38.462 0.00 0.00 0.00 5.03
1675 3003 5.034852 TGATCAAACTCTCCACAAACTGA 57.965 39.130 0.00 0.00 0.00 3.41
1813 4463 7.361127 GGGTTGAGCTAAAACTAAAAAGAGAC 58.639 38.462 0.00 0.00 0.00 3.36
1818 4468 6.293698 AGCTAAAACTAAAAAGAGACGGGAA 58.706 36.000 0.00 0.00 0.00 3.97
1851 4501 0.179067 CAATTAGCGTAAGGGCCCGA 60.179 55.000 18.44 5.55 38.28 5.14
1883 4533 4.379813 GCAAACCTGATAATGTGGTGTCAG 60.380 45.833 0.00 0.00 38.20 3.51
1924 4761 5.462068 CGTAATTCATTATGCAGAGACCGAA 59.538 40.000 0.00 0.00 0.00 4.30
1978 5061 0.532640 CCAAGCCAACAAAGCAACCC 60.533 55.000 0.00 0.00 0.00 4.11
2036 5207 2.554032 AGACAGTGAAAGGCATTTTCCG 59.446 45.455 0.00 0.00 43.72 4.30
2099 5272 5.212194 TGCTGAAAACGAGCTTGTAATTTC 58.788 37.500 18.58 18.58 37.35 2.17
2216 5391 4.058817 GCCACCAGGTAGATCTTTATTCG 58.941 47.826 0.00 0.00 37.19 3.34
2219 5397 6.214399 CCACCAGGTAGATCTTTATTCGTAC 58.786 44.000 0.00 0.00 0.00 3.67
2281 5461 2.215907 TGAAATTTGTGTTGGCACCG 57.784 45.000 0.00 0.00 44.65 4.94
2306 5486 2.719531 TGGTAGTTTGCCACAGTTGA 57.280 45.000 0.00 0.00 0.00 3.18
2374 5554 0.526211 CGTTGATGACGTCCCTCTCA 59.474 55.000 14.12 8.01 46.49 3.27
2390 5570 3.626670 CCTCTCAACATCTCCATTCAAGC 59.373 47.826 0.00 0.00 0.00 4.01
2434 5614 3.844577 ATTTCAGACAGCAAGCATCAC 57.155 42.857 0.00 0.00 0.00 3.06
2444 5624 1.336240 GCAAGCATCACCTTGTTGGAC 60.336 52.381 4.13 0.00 43.17 4.02
2483 5663 0.372679 TCTCGTACGCTCGTGATGTC 59.627 55.000 11.24 0.00 0.00 3.06
2484 5664 0.096454 CTCGTACGCTCGTGATGTCA 59.904 55.000 11.24 0.00 0.00 3.58
2510 5690 6.610830 AGGTTATCACGATATTGGGGATTTT 58.389 36.000 0.00 0.00 0.00 1.82
2531 5711 4.944962 TTCCTTTTCTATGCATGTCGTG 57.055 40.909 10.16 0.00 0.00 4.35
2713 5894 6.189859 TGCTGGAAAGATGTCTCCAATTATT 58.810 36.000 0.00 0.00 41.20 1.40
2744 5925 1.344065 TTCGCAAGGTAGGTCTGGAA 58.656 50.000 0.00 0.00 38.47 3.53
2812 5993 5.934935 ATTCCAATTGCAGCAAAGAAAAG 57.065 34.783 12.97 0.00 0.00 2.27
3679 6875 2.609610 TGGGCCCGTAAAGCTCCT 60.610 61.111 19.37 0.00 0.00 3.69
4534 7749 4.222847 GAACCCTAGCCGCGGGAG 62.223 72.222 29.38 3.09 44.90 4.30
4548 7763 4.964241 GGAGCGGCCCCCTCCTAT 62.964 72.222 23.57 0.00 44.40 2.57
4549 7764 3.315140 GAGCGGCCCCCTCCTATC 61.315 72.222 0.00 0.00 0.00 2.08
4550 7765 4.964241 AGCGGCCCCCTCCTATCC 62.964 72.222 0.00 0.00 0.00 2.59
4551 7766 4.964241 GCGGCCCCCTCCTATCCT 62.964 72.222 0.00 0.00 0.00 3.24
4552 7767 2.122369 CGGCCCCCTCCTATCCTT 60.122 66.667 0.00 0.00 0.00 3.36
4553 7768 2.217745 CGGCCCCCTCCTATCCTTC 61.218 68.421 0.00 0.00 0.00 3.46
4554 7769 1.240428 GGCCCCCTCCTATCCTTCT 59.760 63.158 0.00 0.00 0.00 2.85
4555 7770 1.130678 GGCCCCCTCCTATCCTTCTG 61.131 65.000 0.00 0.00 0.00 3.02
4556 7771 0.400670 GCCCCCTCCTATCCTTCTGT 60.401 60.000 0.00 0.00 0.00 3.41
4557 7772 1.977202 GCCCCCTCCTATCCTTCTGTT 60.977 57.143 0.00 0.00 0.00 3.16
4558 7773 2.696158 GCCCCCTCCTATCCTTCTGTTA 60.696 54.545 0.00 0.00 0.00 2.41
4559 7774 3.243724 CCCCCTCCTATCCTTCTGTTAG 58.756 54.545 0.00 0.00 0.00 2.34
4560 7775 3.375430 CCCCCTCCTATCCTTCTGTTAGT 60.375 52.174 0.00 0.00 0.00 2.24
4561 7776 4.299485 CCCCTCCTATCCTTCTGTTAGTT 58.701 47.826 0.00 0.00 0.00 2.24
4562 7777 4.345547 CCCCTCCTATCCTTCTGTTAGTTC 59.654 50.000 0.00 0.00 0.00 3.01
4563 7778 4.345547 CCCTCCTATCCTTCTGTTAGTTCC 59.654 50.000 0.00 0.00 0.00 3.62
4564 7779 5.212745 CCTCCTATCCTTCTGTTAGTTCCT 58.787 45.833 0.00 0.00 0.00 3.36
4565 7780 5.663556 CCTCCTATCCTTCTGTTAGTTCCTT 59.336 44.000 0.00 0.00 0.00 3.36
4566 7781 6.183360 CCTCCTATCCTTCTGTTAGTTCCTTC 60.183 46.154 0.00 0.00 0.00 3.46
4567 7782 6.503944 TCCTATCCTTCTGTTAGTTCCTTCT 58.496 40.000 0.00 0.00 0.00 2.85
4568 7783 6.381420 TCCTATCCTTCTGTTAGTTCCTTCTG 59.619 42.308 0.00 0.00 0.00 3.02
4569 7784 6.155393 CCTATCCTTCTGTTAGTTCCTTCTGT 59.845 42.308 0.00 0.00 0.00 3.41
4570 7785 5.888982 TCCTTCTGTTAGTTCCTTCTGTT 57.111 39.130 0.00 0.00 0.00 3.16
4571 7786 5.855045 TCCTTCTGTTAGTTCCTTCTGTTC 58.145 41.667 0.00 0.00 0.00 3.18
4572 7787 5.365605 TCCTTCTGTTAGTTCCTTCTGTTCA 59.634 40.000 0.00 0.00 0.00 3.18
4573 7788 5.467063 CCTTCTGTTAGTTCCTTCTGTTCAC 59.533 44.000 0.00 0.00 0.00 3.18
4574 7789 5.871396 TCTGTTAGTTCCTTCTGTTCACT 57.129 39.130 0.00 0.00 0.00 3.41
4575 7790 5.601662 TCTGTTAGTTCCTTCTGTTCACTG 58.398 41.667 0.00 0.00 0.00 3.66
4576 7791 5.128827 TCTGTTAGTTCCTTCTGTTCACTGT 59.871 40.000 0.00 0.00 0.00 3.55
4577 7792 6.322969 TCTGTTAGTTCCTTCTGTTCACTGTA 59.677 38.462 0.00 0.00 0.00 2.74
4578 7793 6.880484 TGTTAGTTCCTTCTGTTCACTGTAA 58.120 36.000 0.00 0.00 0.00 2.41
4579 7794 6.984474 TGTTAGTTCCTTCTGTTCACTGTAAG 59.016 38.462 0.00 0.00 42.29 2.34
4580 7795 4.381411 AGTTCCTTCTGTTCACTGTAAGC 58.619 43.478 0.00 0.00 37.60 3.09
4581 7796 4.127171 GTTCCTTCTGTTCACTGTAAGCA 58.873 43.478 0.00 0.00 37.60 3.91
4582 7797 4.415881 TCCTTCTGTTCACTGTAAGCAA 57.584 40.909 0.00 0.00 37.60 3.91
4583 7798 4.973168 TCCTTCTGTTCACTGTAAGCAAT 58.027 39.130 0.00 0.00 37.60 3.56
4584 7799 4.756642 TCCTTCTGTTCACTGTAAGCAATG 59.243 41.667 0.00 0.00 37.60 2.82
4585 7800 4.756642 CCTTCTGTTCACTGTAAGCAATGA 59.243 41.667 0.00 0.00 37.60 2.57
4586 7801 5.239306 CCTTCTGTTCACTGTAAGCAATGAA 59.761 40.000 0.00 0.00 38.34 2.57
4587 7802 6.072286 CCTTCTGTTCACTGTAAGCAATGAAT 60.072 38.462 0.00 0.00 41.85 2.57
4588 7803 7.119699 CCTTCTGTTCACTGTAAGCAATGAATA 59.880 37.037 0.00 0.00 41.85 1.75
4589 7804 7.977789 TCTGTTCACTGTAAGCAATGAATAA 57.022 32.000 0.00 0.00 41.85 1.40
4590 7805 8.565896 TCTGTTCACTGTAAGCAATGAATAAT 57.434 30.769 0.00 0.00 41.85 1.28
4591 7806 9.665719 TCTGTTCACTGTAAGCAATGAATAATA 57.334 29.630 0.00 0.00 41.85 0.98
4592 7807 9.926751 CTGTTCACTGTAAGCAATGAATAATAG 57.073 33.333 0.00 0.00 41.85 1.73
4593 7808 9.448438 TGTTCACTGTAAGCAATGAATAATAGT 57.552 29.630 0.00 0.00 41.85 2.12
4618 7834 9.325198 GTGTGATGGTAATGAATAATAGTGTGA 57.675 33.333 0.00 0.00 0.00 3.58
4772 7995 6.752351 CCGATCAACTATATGAGGTAAATCCG 59.248 42.308 0.00 0.00 41.99 4.18
4843 8066 4.779696 TCCTTTTTCAAAGGCTGCAATTT 58.220 34.783 10.02 0.00 37.34 1.82
4844 8067 5.192176 TCCTTTTTCAAAGGCTGCAATTTT 58.808 33.333 10.02 0.00 37.34 1.82
5000 8225 9.931698 TGAGTATATTATATTGGTCCCTCGTAT 57.068 33.333 0.00 0.00 0.00 3.06
5173 8408 6.842676 AGTTATTCCCTAGGGTGATCATTTC 58.157 40.000 27.58 10.07 36.47 2.17
5290 8541 5.642063 CCTATGTAATATTTGGGCGAACGAT 59.358 40.000 0.00 0.00 0.00 3.73
5575 9250 9.046296 CAGACCCATAGAAGTAAATGATGTTAC 57.954 37.037 0.00 0.00 34.72 2.50
5582 9257 7.956420 AGAAGTAAATGATGTTACGTGACAA 57.044 32.000 17.64 2.02 38.71 3.18
5690 9399 3.096092 GCATCCATTTAGGGAACAACCA 58.904 45.455 0.00 0.00 41.12 3.67
5698 9407 4.618920 TTAGGGAACAACCAGAGAGTTC 57.381 45.455 0.00 0.00 40.58 3.01
5731 9440 4.307432 AGAAAAGTATCCCATACGCATCG 58.693 43.478 0.00 0.00 40.64 3.84
5814 9523 9.169592 GCTTGTGTTTAGGTGGAGTATTTATTA 57.830 33.333 0.00 0.00 0.00 0.98
6045 9754 8.181573 TCTGTTTACTTTGTTGACATTTCAGTC 58.818 33.333 0.00 0.00 38.99 3.51
6139 16562 4.691685 ACATTTGCGACAATAAAGGTACGA 59.308 37.500 0.00 0.00 30.13 3.43
6225 16680 9.250624 GTAACACTGCAATAATTGTTGGTTAAA 57.749 29.630 15.65 0.00 34.15 1.52
6228 16683 8.772705 ACACTGCAATAATTGTTGGTTAAATTG 58.227 29.630 15.65 2.82 0.00 2.32
6229 16684 7.745594 CACTGCAATAATTGTTGGTTAAATTGC 59.254 33.333 15.65 12.04 41.31 3.56
6232 16687 9.494271 TGCAATAATTGTTGGTTAAATTGCTTA 57.506 25.926 15.65 0.00 41.44 3.09
6274 16733 2.429610 TCCATAGAACACCGACCTAAGC 59.570 50.000 0.00 0.00 0.00 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.386350 CCGTTCCGTTTTTGTTTCTGTTTT 59.614 37.500 0.00 0.00 0.00 2.43
152 154 4.096382 GTGTCATTGTGTTCTCTTTGGTGT 59.904 41.667 0.00 0.00 0.00 4.16
446 450 4.887071 CAGAAACCCCGGAAATGAATATGA 59.113 41.667 0.73 0.00 0.00 2.15
541 545 1.282157 ACAGGCAGTAGGGATGAAACC 59.718 52.381 0.00 0.00 0.00 3.27
584 588 0.946221 ACGGAGAAAGCACGCAAGAG 60.946 55.000 0.00 0.00 43.62 2.85
585 589 1.069090 ACGGAGAAAGCACGCAAGA 59.931 52.632 0.00 0.00 43.62 3.02
587 591 2.892334 GCACGGAGAAAGCACGCAA 61.892 57.895 0.00 0.00 0.00 4.85
588 592 3.345808 GCACGGAGAAAGCACGCA 61.346 61.111 0.00 0.00 0.00 5.24
589 593 4.430423 CGCACGGAGAAAGCACGC 62.430 66.667 0.00 0.00 0.00 5.34
590 594 3.777925 CCGCACGGAGAAAGCACG 61.778 66.667 2.01 0.00 37.50 5.34
591 595 2.665185 ACCGCACGGAGAAAGCAC 60.665 61.111 17.40 0.00 38.96 4.40
592 596 2.664851 CACCGCACGGAGAAAGCA 60.665 61.111 17.40 0.00 38.96 3.91
593 597 2.665185 ACACCGCACGGAGAAAGC 60.665 61.111 17.40 0.00 38.96 3.51
594 598 1.300620 TCACACCGCACGGAGAAAG 60.301 57.895 17.40 4.29 38.96 2.62
595 599 1.593209 GTCACACCGCACGGAGAAA 60.593 57.895 17.40 0.00 38.96 2.52
596 600 1.174078 TAGTCACACCGCACGGAGAA 61.174 55.000 17.40 0.00 38.96 2.87
597 601 1.583495 CTAGTCACACCGCACGGAGA 61.583 60.000 17.40 7.75 38.96 3.71
598 602 1.154016 CTAGTCACACCGCACGGAG 60.154 63.158 17.40 10.85 38.96 4.63
599 603 2.959372 CTAGTCACACCGCACGGA 59.041 61.111 17.40 0.00 38.96 4.69
600 604 2.809601 GCTAGTCACACCGCACGG 60.810 66.667 7.71 7.71 42.03 4.94
601 605 2.049526 TGCTAGTCACACCGCACG 60.050 61.111 0.00 0.00 0.00 5.34
602 606 2.383527 GCTGCTAGTCACACCGCAC 61.384 63.158 0.00 0.00 0.00 5.34
603 607 2.048222 GCTGCTAGTCACACCGCA 60.048 61.111 0.00 0.00 0.00 5.69
604 608 1.630244 CTTGCTGCTAGTCACACCGC 61.630 60.000 0.00 0.00 0.00 5.68
605 609 0.038251 TCTTGCTGCTAGTCACACCG 60.038 55.000 10.72 0.00 0.00 4.94
606 610 1.273606 TCTCTTGCTGCTAGTCACACC 59.726 52.381 10.72 0.00 0.00 4.16
607 611 2.732412 TCTCTTGCTGCTAGTCACAC 57.268 50.000 10.72 0.00 0.00 3.82
608 612 3.555795 CCTTTCTCTTGCTGCTAGTCACA 60.556 47.826 10.72 0.00 0.00 3.58
609 613 2.999355 CCTTTCTCTTGCTGCTAGTCAC 59.001 50.000 10.72 0.00 0.00 3.67
610 614 2.027745 CCCTTTCTCTTGCTGCTAGTCA 60.028 50.000 10.72 0.00 0.00 3.41
611 615 2.234908 TCCCTTTCTCTTGCTGCTAGTC 59.765 50.000 10.72 0.00 0.00 2.59
612 616 2.260822 TCCCTTTCTCTTGCTGCTAGT 58.739 47.619 10.72 0.00 0.00 2.57
613 617 3.055530 TCTTCCCTTTCTCTTGCTGCTAG 60.056 47.826 4.67 4.67 0.00 3.42
614 618 2.906389 TCTTCCCTTTCTCTTGCTGCTA 59.094 45.455 0.00 0.00 0.00 3.49
615 619 1.701847 TCTTCCCTTTCTCTTGCTGCT 59.298 47.619 0.00 0.00 0.00 4.24
616 620 2.191128 TCTTCCCTTTCTCTTGCTGC 57.809 50.000 0.00 0.00 0.00 5.25
617 621 5.242393 TCATTTTCTTCCCTTTCTCTTGCTG 59.758 40.000 0.00 0.00 0.00 4.41
618 622 5.388654 TCATTTTCTTCCCTTTCTCTTGCT 58.611 37.500 0.00 0.00 0.00 3.91
619 623 5.712152 TCATTTTCTTCCCTTTCTCTTGC 57.288 39.130 0.00 0.00 0.00 4.01
620 624 7.362747 CCTCATCATTTTCTTCCCTTTCTCTTG 60.363 40.741 0.00 0.00 0.00 3.02
621 625 6.662663 CCTCATCATTTTCTTCCCTTTCTCTT 59.337 38.462 0.00 0.00 0.00 2.85
622 626 6.186234 CCTCATCATTTTCTTCCCTTTCTCT 58.814 40.000 0.00 0.00 0.00 3.10
623 627 5.948758 ACCTCATCATTTTCTTCCCTTTCTC 59.051 40.000 0.00 0.00 0.00 2.87
624 628 5.713861 CACCTCATCATTTTCTTCCCTTTCT 59.286 40.000 0.00 0.00 0.00 2.52
625 629 5.105595 CCACCTCATCATTTTCTTCCCTTTC 60.106 44.000 0.00 0.00 0.00 2.62
626 630 4.774200 CCACCTCATCATTTTCTTCCCTTT 59.226 41.667 0.00 0.00 0.00 3.11
627 631 4.347607 CCACCTCATCATTTTCTTCCCTT 58.652 43.478 0.00 0.00 0.00 3.95
628 632 3.309410 CCCACCTCATCATTTTCTTCCCT 60.309 47.826 0.00 0.00 0.00 4.20
629 633 3.026694 CCCACCTCATCATTTTCTTCCC 58.973 50.000 0.00 0.00 0.00 3.97
630 634 3.968265 TCCCACCTCATCATTTTCTTCC 58.032 45.455 0.00 0.00 0.00 3.46
631 635 5.982890 TTTCCCACCTCATCATTTTCTTC 57.017 39.130 0.00 0.00 0.00 2.87
632 636 6.239686 CCTTTTTCCCACCTCATCATTTTCTT 60.240 38.462 0.00 0.00 0.00 2.52
633 637 5.246883 CCTTTTTCCCACCTCATCATTTTCT 59.753 40.000 0.00 0.00 0.00 2.52
634 638 5.245977 TCCTTTTTCCCACCTCATCATTTTC 59.754 40.000 0.00 0.00 0.00 2.29
635 639 5.154418 TCCTTTTTCCCACCTCATCATTTT 58.846 37.500 0.00 0.00 0.00 1.82
636 640 4.750941 TCCTTTTTCCCACCTCATCATTT 58.249 39.130 0.00 0.00 0.00 2.32
637 641 4.402616 TCCTTTTTCCCACCTCATCATT 57.597 40.909 0.00 0.00 0.00 2.57
638 642 4.540715 GATCCTTTTTCCCACCTCATCAT 58.459 43.478 0.00 0.00 0.00 2.45
639 643 3.309121 GGATCCTTTTTCCCACCTCATCA 60.309 47.826 3.84 0.00 0.00 3.07
640 644 3.291584 GGATCCTTTTTCCCACCTCATC 58.708 50.000 3.84 0.00 0.00 2.92
641 645 2.654385 TGGATCCTTTTTCCCACCTCAT 59.346 45.455 14.23 0.00 31.87 2.90
642 646 2.069775 TGGATCCTTTTTCCCACCTCA 58.930 47.619 14.23 0.00 31.87 3.86
643 647 2.826128 GTTGGATCCTTTTTCCCACCTC 59.174 50.000 14.23 0.00 31.87 3.85
644 648 2.817839 CGTTGGATCCTTTTTCCCACCT 60.818 50.000 14.23 0.00 31.87 4.00
645 649 1.544246 CGTTGGATCCTTTTTCCCACC 59.456 52.381 14.23 0.00 31.87 4.61
646 650 1.544246 CCGTTGGATCCTTTTTCCCAC 59.456 52.381 14.23 0.00 31.87 4.61
647 651 1.917872 CCGTTGGATCCTTTTTCCCA 58.082 50.000 14.23 0.00 31.87 4.37
648 652 0.530744 GCCGTTGGATCCTTTTTCCC 59.469 55.000 14.23 0.00 31.87 3.97
649 653 0.530744 GGCCGTTGGATCCTTTTTCC 59.469 55.000 14.23 5.29 0.00 3.13
650 654 0.170339 CGGCCGTTGGATCCTTTTTC 59.830 55.000 19.50 0.00 0.00 2.29
651 655 0.538746 ACGGCCGTTGGATCCTTTTT 60.539 50.000 28.70 0.00 0.00 1.94
652 656 1.074248 ACGGCCGTTGGATCCTTTT 59.926 52.632 28.70 0.00 0.00 2.27
653 657 1.674322 CACGGCCGTTGGATCCTTT 60.674 57.895 32.11 0.00 0.00 3.11
654 658 2.046314 CACGGCCGTTGGATCCTT 60.046 61.111 32.11 0.00 0.00 3.36
655 659 4.778143 GCACGGCCGTTGGATCCT 62.778 66.667 32.11 0.00 0.00 3.24
674 678 0.377203 CCCAAAATTCGGCTAGTCGC 59.623 55.000 12.97 0.00 38.13 5.19
675 679 1.664151 GACCCAAAATTCGGCTAGTCG 59.336 52.381 11.33 11.33 0.00 4.18
676 680 1.664151 CGACCCAAAATTCGGCTAGTC 59.336 52.381 0.00 0.00 0.00 2.59
677 681 1.276989 TCGACCCAAAATTCGGCTAGT 59.723 47.619 0.00 0.00 35.89 2.57
678 682 1.664151 GTCGACCCAAAATTCGGCTAG 59.336 52.381 3.51 0.00 36.90 3.42
679 683 1.676615 GGTCGACCCAAAATTCGGCTA 60.677 52.381 24.75 0.00 39.79 3.93
680 684 0.958876 GGTCGACCCAAAATTCGGCT 60.959 55.000 24.75 0.00 39.79 5.52
681 685 1.504900 GGTCGACCCAAAATTCGGC 59.495 57.895 24.75 0.00 39.15 5.54
682 686 1.641123 CCGGTCGACCCAAAATTCGG 61.641 60.000 28.52 18.73 35.89 4.30
683 687 1.791662 CCGGTCGACCCAAAATTCG 59.208 57.895 28.52 13.73 36.55 3.34
684 688 1.504900 GCCGGTCGACCCAAAATTC 59.495 57.895 28.52 6.33 0.00 2.17
685 689 2.329614 CGCCGGTCGACCCAAAATT 61.330 57.895 28.52 0.00 41.67 1.82
686 690 2.744709 CGCCGGTCGACCCAAAAT 60.745 61.111 28.52 0.00 41.67 1.82
703 707 1.881709 GTTTAGGCGGACGCTAGGC 60.882 63.158 16.72 0.00 41.60 3.93
704 708 0.175073 AAGTTTAGGCGGACGCTAGG 59.825 55.000 16.72 0.00 41.60 3.02
705 709 1.925185 GAAAGTTTAGGCGGACGCTAG 59.075 52.381 16.72 0.00 41.60 3.42
706 710 1.547372 AGAAAGTTTAGGCGGACGCTA 59.453 47.619 16.72 4.42 41.60 4.26
707 711 0.320697 AGAAAGTTTAGGCGGACGCT 59.679 50.000 16.72 5.38 41.60 5.07
708 712 0.720027 GAGAAAGTTTAGGCGGACGC 59.280 55.000 8.39 8.39 41.06 5.19
709 713 0.989890 CGAGAAAGTTTAGGCGGACG 59.010 55.000 0.00 0.00 0.00 4.79
710 714 1.991264 GACGAGAAAGTTTAGGCGGAC 59.009 52.381 0.00 0.00 0.00 4.79
711 715 1.067354 GGACGAGAAAGTTTAGGCGGA 60.067 52.381 0.00 0.00 0.00 5.54
712 716 1.356938 GGACGAGAAAGTTTAGGCGG 58.643 55.000 0.00 0.00 0.00 6.13
713 717 1.356938 GGGACGAGAAAGTTTAGGCG 58.643 55.000 0.00 0.00 0.00 5.52
733 737 2.605818 TGAAGTTACGTGTGCTTGTCAC 59.394 45.455 0.00 0.00 45.82 3.67
734 738 2.863740 CTGAAGTTACGTGTGCTTGTCA 59.136 45.455 0.00 0.00 0.00 3.58
735 739 2.864343 ACTGAAGTTACGTGTGCTTGTC 59.136 45.455 0.00 0.00 0.00 3.18
736 740 2.901249 ACTGAAGTTACGTGTGCTTGT 58.099 42.857 0.00 0.00 0.00 3.16
737 741 3.546020 CCAACTGAAGTTACGTGTGCTTG 60.546 47.826 0.00 0.00 36.32 4.01
738 742 2.612212 CCAACTGAAGTTACGTGTGCTT 59.388 45.455 0.00 0.00 36.32 3.91
739 743 2.210116 CCAACTGAAGTTACGTGTGCT 58.790 47.619 0.00 0.00 36.32 4.40
740 744 1.937899 ACCAACTGAAGTTACGTGTGC 59.062 47.619 0.00 0.00 36.32 4.57
741 745 3.000925 GTGACCAACTGAAGTTACGTGTG 59.999 47.826 0.00 0.00 36.32 3.82
742 746 3.192466 GTGACCAACTGAAGTTACGTGT 58.808 45.455 0.00 0.00 36.32 4.49
743 747 3.191669 TGTGACCAACTGAAGTTACGTG 58.808 45.455 0.00 0.00 36.32 4.49
744 748 3.118884 ACTGTGACCAACTGAAGTTACGT 60.119 43.478 0.00 0.00 36.32 3.57
745 749 3.454375 ACTGTGACCAACTGAAGTTACG 58.546 45.455 0.00 0.00 36.32 3.18
746 750 8.773404 ATTATACTGTGACCAACTGAAGTTAC 57.227 34.615 0.00 0.00 36.32 2.50
747 751 8.590204 TGATTATACTGTGACCAACTGAAGTTA 58.410 33.333 0.00 0.00 36.32 2.24
748 752 7.450074 TGATTATACTGTGACCAACTGAAGTT 58.550 34.615 0.00 0.00 39.12 2.66
749 753 7.004555 TGATTATACTGTGACCAACTGAAGT 57.995 36.000 0.00 0.00 0.00 3.01
750 754 7.011763 CCATGATTATACTGTGACCAACTGAAG 59.988 40.741 0.00 0.00 0.00 3.02
751 755 6.823182 CCATGATTATACTGTGACCAACTGAA 59.177 38.462 0.00 0.00 0.00 3.02
752 756 6.070251 ACCATGATTATACTGTGACCAACTGA 60.070 38.462 0.00 0.00 0.00 3.41
753 757 6.115446 ACCATGATTATACTGTGACCAACTG 58.885 40.000 0.00 0.00 0.00 3.16
754 758 6.313519 ACCATGATTATACTGTGACCAACT 57.686 37.500 0.00 0.00 0.00 3.16
755 759 6.706270 CCTACCATGATTATACTGTGACCAAC 59.294 42.308 0.00 0.00 0.00 3.77
756 760 6.385759 ACCTACCATGATTATACTGTGACCAA 59.614 38.462 0.00 0.00 0.00 3.67
757 761 5.903010 ACCTACCATGATTATACTGTGACCA 59.097 40.000 0.00 0.00 0.00 4.02
758 762 6.420913 ACCTACCATGATTATACTGTGACC 57.579 41.667 0.00 0.00 0.00 4.02
759 763 7.871463 GGTTACCTACCATGATTATACTGTGAC 59.129 40.741 0.00 0.00 46.92 3.67
760 764 7.959175 GGTTACCTACCATGATTATACTGTGA 58.041 38.462 0.00 0.00 46.92 3.58
776 780 0.175073 CAGGCGGACAGGTTACCTAC 59.825 60.000 2.52 1.19 29.64 3.18
777 781 0.251922 ACAGGCGGACAGGTTACCTA 60.252 55.000 2.52 0.00 29.64 3.08
778 782 1.535687 ACAGGCGGACAGGTTACCT 60.536 57.895 0.00 0.00 0.00 3.08
779 783 1.375523 CACAGGCGGACAGGTTACC 60.376 63.158 0.00 0.00 0.00 2.85
780 784 0.949105 CACACAGGCGGACAGGTTAC 60.949 60.000 0.00 0.00 0.00 2.50
781 785 1.116536 TCACACAGGCGGACAGGTTA 61.117 55.000 0.00 0.00 0.00 2.85
782 786 2.111043 CACACAGGCGGACAGGTT 59.889 61.111 0.00 0.00 0.00 3.50
783 787 2.842462 TCACACAGGCGGACAGGT 60.842 61.111 0.00 0.00 0.00 4.00
784 788 2.047844 CTCACACAGGCGGACAGG 60.048 66.667 0.00 0.00 0.00 4.00
785 789 1.080230 CTCTCACACAGGCGGACAG 60.080 63.158 0.00 0.00 0.00 3.51
786 790 0.538746 TACTCTCACACAGGCGGACA 60.539 55.000 0.00 0.00 0.00 4.02
787 791 0.601558 TTACTCTCACACAGGCGGAC 59.398 55.000 0.00 0.00 0.00 4.79
788 792 1.476891 GATTACTCTCACACAGGCGGA 59.523 52.381 0.00 0.00 0.00 5.54
789 793 1.204704 TGATTACTCTCACACAGGCGG 59.795 52.381 0.00 0.00 0.00 6.13
790 794 2.534298 CTGATTACTCTCACACAGGCG 58.466 52.381 0.00 0.00 0.00 5.52
791 795 2.275318 GCTGATTACTCTCACACAGGC 58.725 52.381 0.00 0.00 0.00 4.85
792 796 3.599730 TGCTGATTACTCTCACACAGG 57.400 47.619 0.00 0.00 0.00 4.00
793 797 4.751600 TGTTTGCTGATTACTCTCACACAG 59.248 41.667 0.00 0.00 0.00 3.66
794 798 4.702831 TGTTTGCTGATTACTCTCACACA 58.297 39.130 0.00 0.00 0.00 3.72
795 799 4.752101 ACTGTTTGCTGATTACTCTCACAC 59.248 41.667 0.00 0.00 0.00 3.82
796 800 4.960938 ACTGTTTGCTGATTACTCTCACA 58.039 39.130 0.00 0.00 0.00 3.58
797 801 7.331934 TGATTACTGTTTGCTGATTACTCTCAC 59.668 37.037 0.00 0.00 0.00 3.51
798 802 7.331934 GTGATTACTGTTTGCTGATTACTCTCA 59.668 37.037 0.00 0.00 0.00 3.27
799 803 7.201565 GGTGATTACTGTTTGCTGATTACTCTC 60.202 40.741 0.00 0.00 0.00 3.20
800 804 6.595716 GGTGATTACTGTTTGCTGATTACTCT 59.404 38.462 0.00 0.00 0.00 3.24
801 805 6.595716 AGGTGATTACTGTTTGCTGATTACTC 59.404 38.462 0.00 0.00 0.00 2.59
802 806 6.372659 CAGGTGATTACTGTTTGCTGATTACT 59.627 38.462 0.00 0.00 0.00 2.24
803 807 6.546395 CAGGTGATTACTGTTTGCTGATTAC 58.454 40.000 0.00 0.00 0.00 1.89
804 808 5.123820 GCAGGTGATTACTGTTTGCTGATTA 59.876 40.000 0.00 0.00 38.22 1.75
805 809 4.082571 GCAGGTGATTACTGTTTGCTGATT 60.083 41.667 0.00 0.00 38.22 2.57
806 810 3.441572 GCAGGTGATTACTGTTTGCTGAT 59.558 43.478 0.00 0.00 38.22 2.90
807 811 2.813754 GCAGGTGATTACTGTTTGCTGA 59.186 45.455 0.00 0.00 38.22 4.26
808 812 2.095059 GGCAGGTGATTACTGTTTGCTG 60.095 50.000 0.00 0.00 38.22 4.41
809 813 2.162681 GGCAGGTGATTACTGTTTGCT 58.837 47.619 0.00 0.00 38.22 3.91
810 814 1.202348 GGGCAGGTGATTACTGTTTGC 59.798 52.381 0.00 0.00 38.22 3.68
811 815 2.489329 CAGGGCAGGTGATTACTGTTTG 59.511 50.000 0.00 0.00 38.22 2.93
812 816 2.795329 CAGGGCAGGTGATTACTGTTT 58.205 47.619 0.00 0.00 38.22 2.83
813 817 1.614317 GCAGGGCAGGTGATTACTGTT 60.614 52.381 0.00 0.00 38.22 3.16
814 818 0.035056 GCAGGGCAGGTGATTACTGT 60.035 55.000 0.00 0.00 38.22 3.55
815 819 0.749454 GGCAGGGCAGGTGATTACTG 60.749 60.000 0.00 0.00 38.95 2.74
816 820 0.916358 AGGCAGGGCAGGTGATTACT 60.916 55.000 0.00 0.00 0.00 2.24
825 829 2.586792 GTAGGACAGGCAGGGCAG 59.413 66.667 0.00 0.00 0.00 4.85
827 831 2.378634 ATGGTAGGACAGGCAGGGC 61.379 63.158 0.00 0.00 0.00 5.19
832 836 0.106894 GCTACCATGGTAGGACAGGC 59.893 60.000 40.07 27.64 45.87 4.85
835 839 1.007842 TCCAGCTACCATGGTAGGACA 59.992 52.381 40.07 17.54 45.87 4.02
836 840 1.789523 TCCAGCTACCATGGTAGGAC 58.210 55.000 40.07 28.91 45.87 3.85
842 846 2.947652 CAAGTGATTCCAGCTACCATGG 59.052 50.000 11.19 11.19 39.33 3.66
847 851 1.661112 GCGACAAGTGATTCCAGCTAC 59.339 52.381 0.00 0.00 0.00 3.58
862 866 0.684535 TGGGTCATCAGAAAGCGACA 59.315 50.000 0.00 0.00 0.00 4.35
863 867 1.079503 GTGGGTCATCAGAAAGCGAC 58.920 55.000 0.00 0.00 0.00 5.19
901 905 4.269844 CCAACACCGAATTGAAAGGTTTTG 59.730 41.667 5.93 5.93 42.29 2.44
902 906 4.160626 TCCAACACCGAATTGAAAGGTTTT 59.839 37.500 0.00 0.00 35.85 2.43
909 913 5.411361 CAGTAGAATCCAACACCGAATTGAA 59.589 40.000 0.00 0.00 0.00 2.69
910 914 4.935205 CAGTAGAATCCAACACCGAATTGA 59.065 41.667 0.00 0.00 0.00 2.57
911 915 4.437390 GCAGTAGAATCCAACACCGAATTG 60.437 45.833 0.00 0.00 0.00 2.32
913 917 3.270877 GCAGTAGAATCCAACACCGAAT 58.729 45.455 0.00 0.00 0.00 3.34
914 918 2.037902 TGCAGTAGAATCCAACACCGAA 59.962 45.455 0.00 0.00 0.00 4.30
915 919 1.621317 TGCAGTAGAATCCAACACCGA 59.379 47.619 0.00 0.00 0.00 4.69
916 920 1.732259 GTGCAGTAGAATCCAACACCG 59.268 52.381 0.00 0.00 0.00 4.94
917 921 2.744202 CTGTGCAGTAGAATCCAACACC 59.256 50.000 0.00 0.00 0.00 4.16
918 922 3.433615 GTCTGTGCAGTAGAATCCAACAC 59.566 47.826 2.37 0.00 0.00 3.32
919 923 3.664107 GTCTGTGCAGTAGAATCCAACA 58.336 45.455 2.37 0.00 0.00 3.33
920 924 2.668457 CGTCTGTGCAGTAGAATCCAAC 59.332 50.000 2.37 0.00 0.00 3.77
921 925 2.560981 TCGTCTGTGCAGTAGAATCCAA 59.439 45.455 2.37 0.00 0.00 3.53
922 926 2.167662 TCGTCTGTGCAGTAGAATCCA 58.832 47.619 2.37 0.00 0.00 3.41
923 927 2.924290 GTTCGTCTGTGCAGTAGAATCC 59.076 50.000 2.37 0.00 31.82 3.01
924 928 2.924290 GGTTCGTCTGTGCAGTAGAATC 59.076 50.000 2.37 9.53 31.82 2.52
925 929 2.353803 GGGTTCGTCTGTGCAGTAGAAT 60.354 50.000 2.37 0.00 31.82 2.40
926 930 1.000506 GGGTTCGTCTGTGCAGTAGAA 59.999 52.381 2.37 4.10 0.00 2.10
927 931 0.601558 GGGTTCGTCTGTGCAGTAGA 59.398 55.000 0.00 0.00 0.00 2.59
934 938 1.734477 CAGCTCGGGTTCGTCTGTG 60.734 63.158 0.00 0.00 35.32 3.66
938 942 2.543238 CCTTATACAGCTCGGGTTCGTC 60.543 54.545 0.00 0.00 37.69 4.20
939 943 1.407979 CCTTATACAGCTCGGGTTCGT 59.592 52.381 0.00 0.00 37.69 3.85
968 972 2.304470 GGCTTCTCTCTTTCCCTTGTCT 59.696 50.000 0.00 0.00 0.00 3.41
992 997 0.035439 AGCTTTACCCATGGTGTCCG 60.035 55.000 11.73 0.00 36.19 4.79
1033 1050 1.218316 GCAGAACGAGGGGAACGAT 59.782 57.895 0.00 0.00 34.70 3.73
1177 1206 0.110328 CTGCAGAAGCGCACTTGAAG 60.110 55.000 8.42 4.25 46.23 3.02
1224 1256 1.682740 AGTAGTAGAAGAGCTCCGCC 58.317 55.000 10.93 0.00 0.00 6.13
1269 1301 1.995626 CAGGATCAGGGGGTCCGTT 60.996 63.158 0.00 0.00 39.54 4.44
1279 1311 0.105593 CCCGTCATCCACAGGATCAG 59.894 60.000 0.00 0.00 40.98 2.90
1347 1379 3.031736 CAAGAGGAAGGGAGGACGATAA 58.968 50.000 0.00 0.00 0.00 1.75
1348 1380 2.024273 ACAAGAGGAAGGGAGGACGATA 60.024 50.000 0.00 0.00 0.00 2.92
1349 1381 1.273324 ACAAGAGGAAGGGAGGACGAT 60.273 52.381 0.00 0.00 0.00 3.73
1350 1382 0.114560 ACAAGAGGAAGGGAGGACGA 59.885 55.000 0.00 0.00 0.00 4.20
1351 1383 0.247736 CACAAGAGGAAGGGAGGACG 59.752 60.000 0.00 0.00 0.00 4.79
1352 1384 1.353091 ACACAAGAGGAAGGGAGGAC 58.647 55.000 0.00 0.00 0.00 3.85
1415 1467 7.717436 TCTGATTCTGATGTACTCCAGTAGTAG 59.283 40.741 12.52 8.90 41.42 2.57
1422 1474 8.311395 ACTTAATCTGATTCTGATGTACTCCA 57.689 34.615 6.10 0.00 0.00 3.86
1512 1615 7.920682 GGCGAAAAACCTGATACATATTTTCAT 59.079 33.333 0.00 0.00 36.87 2.57
1638 2966 2.771089 TGATCAGGTCAACTGCTCAAC 58.229 47.619 0.00 0.00 46.21 3.18
1764 4197 6.071672 CCCATGAGTAGATACTACCTGATGTG 60.072 46.154 0.00 0.00 36.50 3.21
1813 4463 5.835113 ATTGATACACCATTTTCTTCCCG 57.165 39.130 0.00 0.00 0.00 5.14
1818 4468 8.500753 TTACGCTAATTGATACACCATTTTCT 57.499 30.769 0.00 0.00 0.00 2.52
1851 4501 8.145767 CCACATTATCAGGTTTGCAAATGATAT 58.854 33.333 25.30 16.87 35.26 1.63
1883 4533 9.722056 ATGAATTACGCTTTTCATCTTGTAATC 57.278 29.630 2.48 0.00 37.93 1.75
1924 4761 9.487442 AAGAGTAAGAAGGACAAGAGAGATAAT 57.513 33.333 0.00 0.00 0.00 1.28
1978 5061 0.318022 TGCATTTGTGCGTCTTGCTG 60.318 50.000 0.00 0.00 46.63 4.41
2004 5175 6.096141 TGCCTTTCACTGTCTAAAACATGAAA 59.904 34.615 0.00 0.00 39.86 2.69
2235 5413 3.197766 ACCTGCGGAGAAAATATCACTGA 59.802 43.478 5.10 0.00 0.00 3.41
2247 5427 1.860641 TTTCATAGGACCTGCGGAGA 58.139 50.000 5.10 0.00 0.00 3.71
2281 5461 6.373216 TCAACTGTGGCAAACTACCATTATAC 59.627 38.462 0.00 0.00 39.95 1.47
2306 5486 6.339220 TGGACCATGAATAGGGATTATAGGT 58.661 40.000 0.00 0.00 0.00 3.08
2356 5536 2.288825 TGTTGAGAGGGACGTCATCAAC 60.289 50.000 29.07 29.07 46.25 3.18
2374 5554 3.159472 TGCTTGCTTGAATGGAGATGTT 58.841 40.909 0.00 0.00 0.00 2.71
2411 5591 4.986659 GTGATGCTTGCTGTCTGAAATTTT 59.013 37.500 0.00 0.00 0.00 1.82
2412 5592 4.553323 GTGATGCTTGCTGTCTGAAATTT 58.447 39.130 0.00 0.00 0.00 1.82
2434 5614 1.949525 CAACTGGTGAGTCCAACAAGG 59.050 52.381 0.00 0.00 46.59 3.61
2483 5663 5.373222 TCCCCAATATCGTGATAACCTTTG 58.627 41.667 0.00 0.00 0.00 2.77
2484 5664 5.640158 TCCCCAATATCGTGATAACCTTT 57.360 39.130 0.00 0.00 0.00 3.11
2510 5690 4.574892 TCACGACATGCATAGAAAAGGAA 58.425 39.130 0.00 0.00 0.00 3.36
2531 5711 7.214467 TGGTTTCACCTTGTTGAGAAATATC 57.786 36.000 0.00 0.00 39.58 1.63
2713 5894 1.535649 CCTTGCGAAATGTGTTGTGCA 60.536 47.619 0.00 0.00 0.00 4.57
2835 6016 8.981659 TGATTATTCACTACATATCCCGATGAT 58.018 33.333 0.00 0.00 37.49 2.45
2887 6076 4.283337 TGAGGCCATGATCAATCACAAAT 58.717 39.130 5.01 0.00 40.03 2.32
2888 6077 3.699413 TGAGGCCATGATCAATCACAAA 58.301 40.909 5.01 0.00 40.03 2.83
3285 6481 1.437772 CCTCTCGCCTCGTCGTGTAT 61.438 60.000 0.00 0.00 0.00 2.29
4532 7747 3.315140 GATAGGAGGGGGCCGCTC 61.315 72.222 35.50 35.50 41.74 5.03
4533 7748 4.964241 GGATAGGAGGGGGCCGCT 62.964 72.222 24.69 24.69 0.00 5.52
4534 7749 4.964241 AGGATAGGAGGGGGCCGC 62.964 72.222 13.58 13.58 0.00 6.53
4535 7750 2.122369 AAGGATAGGAGGGGGCCG 60.122 66.667 0.00 0.00 0.00 6.13
4536 7751 1.130678 CAGAAGGATAGGAGGGGGCC 61.131 65.000 0.00 0.00 0.00 5.80
4537 7752 0.400670 ACAGAAGGATAGGAGGGGGC 60.401 60.000 0.00 0.00 0.00 5.80
4538 7753 2.198334 AACAGAAGGATAGGAGGGGG 57.802 55.000 0.00 0.00 0.00 5.40
4539 7754 3.930035 ACTAACAGAAGGATAGGAGGGG 58.070 50.000 0.00 0.00 0.00 4.79
4540 7755 4.345547 GGAACTAACAGAAGGATAGGAGGG 59.654 50.000 0.00 0.00 0.00 4.30
4541 7756 5.212745 AGGAACTAACAGAAGGATAGGAGG 58.787 45.833 0.00 0.00 36.02 4.30
4542 7757 6.609616 AGAAGGAACTAACAGAAGGATAGGAG 59.390 42.308 0.00 0.00 38.49 3.69
4543 7758 6.381420 CAGAAGGAACTAACAGAAGGATAGGA 59.619 42.308 0.00 0.00 38.49 2.94
4544 7759 6.155393 ACAGAAGGAACTAACAGAAGGATAGG 59.845 42.308 0.00 0.00 38.49 2.57
4545 7760 7.176589 ACAGAAGGAACTAACAGAAGGATAG 57.823 40.000 0.00 0.00 38.49 2.08
4546 7761 7.234782 TGAACAGAAGGAACTAACAGAAGGATA 59.765 37.037 0.00 0.00 38.49 2.59
4547 7762 6.043243 TGAACAGAAGGAACTAACAGAAGGAT 59.957 38.462 0.00 0.00 38.49 3.24
4548 7763 5.365605 TGAACAGAAGGAACTAACAGAAGGA 59.634 40.000 0.00 0.00 38.49 3.36
4549 7764 5.467063 GTGAACAGAAGGAACTAACAGAAGG 59.533 44.000 0.00 0.00 38.49 3.46
4550 7765 6.201806 CAGTGAACAGAAGGAACTAACAGAAG 59.798 42.308 0.00 0.00 38.49 2.85
4551 7766 6.049149 CAGTGAACAGAAGGAACTAACAGAA 58.951 40.000 0.00 0.00 38.49 3.02
4552 7767 5.128827 ACAGTGAACAGAAGGAACTAACAGA 59.871 40.000 0.00 0.00 38.49 3.41
4553 7768 5.360591 ACAGTGAACAGAAGGAACTAACAG 58.639 41.667 0.00 0.00 38.49 3.16
4554 7769 5.353394 ACAGTGAACAGAAGGAACTAACA 57.647 39.130 0.00 0.00 38.49 2.41
4555 7770 6.073711 GCTTACAGTGAACAGAAGGAACTAAC 60.074 42.308 0.00 0.00 38.49 2.34
4556 7771 5.989777 GCTTACAGTGAACAGAAGGAACTAA 59.010 40.000 0.00 0.00 38.49 2.24
4557 7772 5.069914 TGCTTACAGTGAACAGAAGGAACTA 59.930 40.000 0.00 0.00 38.49 2.24
4558 7773 8.858048 CATTGCTTACAGTGAACAGAAGGAACT 61.858 40.741 0.00 0.00 36.30 3.01
4559 7774 4.127171 TGCTTACAGTGAACAGAAGGAAC 58.873 43.478 0.00 0.00 0.00 3.62
4560 7775 4.415881 TGCTTACAGTGAACAGAAGGAA 57.584 40.909 0.00 0.00 0.00 3.36
4561 7776 4.415881 TTGCTTACAGTGAACAGAAGGA 57.584 40.909 0.00 0.00 0.00 3.36
4562 7777 4.756642 TCATTGCTTACAGTGAACAGAAGG 59.243 41.667 0.00 0.00 39.34 3.46
4563 7778 5.929697 TCATTGCTTACAGTGAACAGAAG 57.070 39.130 0.00 0.00 39.34 2.85
4570 7785 8.882736 CACACTATTATTCATTGCTTACAGTGA 58.117 33.333 0.00 0.00 40.41 3.41
4571 7786 8.882736 TCACACTATTATTCATTGCTTACAGTG 58.117 33.333 0.00 0.00 36.58 3.66
4572 7787 9.618890 ATCACACTATTATTCATTGCTTACAGT 57.381 29.630 0.00 0.00 0.00 3.55
4573 7788 9.874215 CATCACACTATTATTCATTGCTTACAG 57.126 33.333 0.00 0.00 0.00 2.74
4574 7789 8.839343 CCATCACACTATTATTCATTGCTTACA 58.161 33.333 0.00 0.00 0.00 2.41
4575 7790 8.840321 ACCATCACACTATTATTCATTGCTTAC 58.160 33.333 0.00 0.00 0.00 2.34
4576 7791 8.978874 ACCATCACACTATTATTCATTGCTTA 57.021 30.769 0.00 0.00 0.00 3.09
4577 7792 7.886629 ACCATCACACTATTATTCATTGCTT 57.113 32.000 0.00 0.00 0.00 3.91
4578 7793 8.978874 TTACCATCACACTATTATTCATTGCT 57.021 30.769 0.00 0.00 0.00 3.91
4579 7794 9.616634 CATTACCATCACACTATTATTCATTGC 57.383 33.333 0.00 0.00 0.00 3.56
4591 7806 9.330063 CACACTATTATTCATTACCATCACACT 57.670 33.333 0.00 0.00 0.00 3.55
4592 7807 9.325198 TCACACTATTATTCATTACCATCACAC 57.675 33.333 0.00 0.00 0.00 3.82
4593 7808 9.898152 TTCACACTATTATTCATTACCATCACA 57.102 29.630 0.00 0.00 0.00 3.58
4618 7834 6.872920 TGAACATAGCAAAGAACAAAAGGTT 58.127 32.000 0.00 0.00 44.10 3.50
4772 7995 2.033801 ACTTATGGATGCGCTTGAATGC 59.966 45.455 9.73 0.00 0.00 3.56
4779 8002 1.019673 CTGCAACTTATGGATGCGCT 58.980 50.000 9.73 0.00 42.91 5.92
4780 8003 0.734889 ACTGCAACTTATGGATGCGC 59.265 50.000 0.00 0.00 42.91 6.09
4820 8043 3.902881 TTGCAGCCTTTGAAAAAGGAA 57.097 38.095 20.39 5.05 39.81 3.36
4821 8044 4.420522 AATTGCAGCCTTTGAAAAAGGA 57.579 36.364 20.39 1.88 39.81 3.36
4996 8221 4.032900 AGACACGAGCTGCAATTAAATACG 59.967 41.667 1.02 0.00 0.00 3.06
5000 8225 3.398406 TCAGACACGAGCTGCAATTAAA 58.602 40.909 1.02 0.00 33.45 1.52
5290 8541 2.451490 AGAGCTTCTCTCGTGGAATCA 58.549 47.619 0.00 0.00 46.44 2.57
5405 8658 9.829507 AATCAAATATCTCATATGCTAGCTACC 57.170 33.333 17.23 0.00 0.00 3.18
5575 9250 5.924475 ACTAGAAACTCCAATTTGTCACG 57.076 39.130 0.00 0.00 0.00 4.35
5617 9292 0.404426 AAAGGTTAGGGTGGTGCTCC 59.596 55.000 0.00 0.00 0.00 4.70
5653 9333 5.327616 TGGATGCATTGTTTCAGTAATGG 57.672 39.130 0.00 0.00 35.40 3.16
5690 9399 7.882271 ACTTTTCTTGCATCTTATGAACTCTCT 59.118 33.333 0.00 0.00 0.00 3.10
5698 9407 7.572523 TGGGATACTTTTCTTGCATCTTATG 57.427 36.000 0.00 0.00 0.00 1.90
5814 9523 9.920946 AATCAGTACATGTAAAATACCAAGGAT 57.079 29.630 7.25 0.00 0.00 3.24
5834 9543 4.201910 CGTGTTGACCAAGTTTCAATCAGT 60.202 41.667 0.00 0.00 35.47 3.41
5990 9699 3.502123 TGTTTACTTTACCCTGCAGCT 57.498 42.857 8.66 0.00 0.00 4.24
6045 9754 4.638421 TGTGTTCCTTGTCAAGTAACCAAG 59.362 41.667 15.95 0.00 36.26 3.61
6175 16625 5.704515 CAGTTTCTTCTGTCCAATCATGTCT 59.295 40.000 0.00 0.00 0.00 3.41
6228 16683 2.418083 GCCACCACCCTGCATAAGC 61.418 63.158 0.00 0.00 42.57 3.09
6229 16684 1.754234 GGCCACCACCCTGCATAAG 60.754 63.158 0.00 0.00 0.00 1.73
6274 16733 3.319755 GTTGAACCATGGCAAGACATTG 58.680 45.455 13.04 0.00 39.57 2.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.