Multiple sequence alignment - TraesCS5A01G262300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G262300 chr5A 100.000 3867 0 0 1 3867 475615536 475619402 0.000000e+00 7142.0
1 TraesCS5A01G262300 chr5A 81.933 238 24 9 966 1188 400400696 400400463 2.370000e-42 183.0
2 TraesCS5A01G262300 chr5D 91.133 1094 71 15 1347 2435 373770662 373771734 0.000000e+00 1459.0
3 TraesCS5A01G262300 chr5D 92.419 554 23 5 550 1099 373768598 373769136 0.000000e+00 773.0
4 TraesCS5A01G262300 chr5D 88.698 407 40 4 2749 3153 373772153 373772555 3.470000e-135 492.0
5 TraesCS5A01G262300 chr5D 90.704 355 26 6 158 509 373767917 373768267 2.100000e-127 466.0
6 TraesCS5A01G262300 chr5D 84.848 429 31 18 3150 3545 373772602 373773029 6.020000e-108 401.0
7 TraesCS5A01G262300 chr5D 90.221 317 15 2 2434 2749 373771824 373772125 2.160000e-107 399.0
8 TraesCS5A01G262300 chr5D 91.064 235 11 5 1089 1319 373770436 373770664 3.750000e-80 309.0
9 TraesCS5A01G262300 chr5D 95.312 64 3 0 3604 3667 373773027 373773090 6.840000e-18 102.0
10 TraesCS5A01G262300 chr2B 88.152 709 76 7 1718 2426 772026385 772027085 0.000000e+00 837.0
11 TraesCS5A01G262300 chr2B 90.798 163 9 1 976 1132 772023760 772023922 3.030000e-51 213.0
12 TraesCS5A01G262300 chr2D 87.588 709 81 5 1718 2424 629208743 629208040 0.000000e+00 815.0
13 TraesCS5A01G262300 chr2D 81.503 173 29 3 1632 1802 629210474 629210303 5.210000e-29 139.0
14 TraesCS5A01G262300 chr2A 87.326 718 76 10 1723 2435 758929201 758928494 0.000000e+00 808.0
15 TraesCS5A01G262300 chr2A 76.962 599 85 35 2434 3023 758928405 758927851 3.780000e-75 292.0
16 TraesCS5A01G262300 chr2A 85.477 241 22 6 1005 1233 758931322 758931083 4.990000e-59 239.0
17 TraesCS5A01G262300 chr2A 84.653 202 17 7 966 1155 59042533 59042732 5.100000e-44 189.0
18 TraesCS5A01G262300 chr3D 81.724 290 40 9 2435 2712 500473310 500473598 3.010000e-56 230.0
19 TraesCS5A01G262300 chr3D 75.436 574 81 35 2434 2966 500460767 500461321 1.400000e-54 224.0
20 TraesCS5A01G262300 chr7A 83.962 212 19 8 975 1174 4725111 4724903 5.100000e-44 189.0
21 TraesCS5A01G262300 chr3B 83.410 217 22 8 969 1174 798018541 798018328 5.100000e-44 189.0
22 TraesCS5A01G262300 chr3B 86.667 135 17 1 2434 2568 661725749 661725882 8.660000e-32 148.0
23 TraesCS5A01G262300 chr5B 82.589 224 24 6 969 1180 631327146 631326926 2.370000e-42 183.0
24 TraesCS5A01G262300 chr5B 81.567 217 25 8 970 1174 616122386 616122173 8.600000e-37 165.0
25 TraesCS5A01G262300 chr7B 74.118 255 46 15 234 481 136880202 136879961 1.910000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G262300 chr5A 475615536 475619402 3866 False 7142.000000 7142 100.000000 1 3867 1 chr5A.!!$F1 3866
1 TraesCS5A01G262300 chr5D 373767917 373773090 5173 False 550.125000 1459 90.549875 158 3667 8 chr5D.!!$F1 3509
2 TraesCS5A01G262300 chr2B 772023760 772027085 3325 False 525.000000 837 89.475000 976 2426 2 chr2B.!!$F1 1450
3 TraesCS5A01G262300 chr2D 629208040 629210474 2434 True 477.000000 815 84.545500 1632 2424 2 chr2D.!!$R1 792
4 TraesCS5A01G262300 chr2A 758927851 758931322 3471 True 446.333333 808 83.255000 1005 3023 3 chr2A.!!$R1 2018
5 TraesCS5A01G262300 chr3D 500460767 500461321 554 False 224.000000 224 75.436000 2434 2966 1 chr3D.!!$F1 532

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
954 1246 0.034477 CCAGGGGCGTTAACCAATCT 60.034 55.0 0.00 0.0 0.00 2.4 F
1319 2963 0.033504 GATCGCCCGGAGCTCATTAA 59.966 55.0 17.19 0.0 40.39 1.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2853 6660 0.033366 CCGCCATCATATGTCGACCA 59.967 55.0 14.12 0.58 0.0 4.02 R
2946 6761 0.038166 ACCACCATCGTCCATGCTTT 59.962 50.0 0.00 0.00 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.600164 TGGTTGTGCTGCCCAGAA 59.400 55.556 0.00 0.00 0.00 3.02
18 19 1.153524 TGGTTGTGCTGCCCAGAAT 59.846 52.632 0.00 0.00 0.00 2.40
19 20 0.895100 TGGTTGTGCTGCCCAGAATC 60.895 55.000 0.00 0.00 0.00 2.52
20 21 0.895100 GGTTGTGCTGCCCAGAATCA 60.895 55.000 0.00 0.00 28.75 2.57
21 22 1.180029 GTTGTGCTGCCCAGAATCAT 58.820 50.000 0.00 0.00 0.00 2.45
22 23 2.368439 GTTGTGCTGCCCAGAATCATA 58.632 47.619 0.00 0.00 0.00 2.15
23 24 2.754552 GTTGTGCTGCCCAGAATCATAA 59.245 45.455 0.00 0.00 0.00 1.90
24 25 3.084536 TGTGCTGCCCAGAATCATAAA 57.915 42.857 0.00 0.00 0.00 1.40
25 26 3.429492 TGTGCTGCCCAGAATCATAAAA 58.571 40.909 0.00 0.00 0.00 1.52
26 27 3.831333 TGTGCTGCCCAGAATCATAAAAA 59.169 39.130 0.00 0.00 0.00 1.94
27 28 4.082081 TGTGCTGCCCAGAATCATAAAAAG 60.082 41.667 0.00 0.00 0.00 2.27
28 29 4.158394 GTGCTGCCCAGAATCATAAAAAGA 59.842 41.667 0.00 0.00 0.00 2.52
29 30 4.158394 TGCTGCCCAGAATCATAAAAAGAC 59.842 41.667 0.00 0.00 0.00 3.01
30 31 4.400567 GCTGCCCAGAATCATAAAAAGACT 59.599 41.667 0.00 0.00 0.00 3.24
31 32 5.590259 GCTGCCCAGAATCATAAAAAGACTA 59.410 40.000 0.00 0.00 0.00 2.59
32 33 6.095440 GCTGCCCAGAATCATAAAAAGACTAA 59.905 38.462 0.00 0.00 0.00 2.24
33 34 7.201857 GCTGCCCAGAATCATAAAAAGACTAAT 60.202 37.037 0.00 0.00 0.00 1.73
34 35 9.342308 CTGCCCAGAATCATAAAAAGACTAATA 57.658 33.333 0.00 0.00 0.00 0.98
35 36 9.866655 TGCCCAGAATCATAAAAAGACTAATAT 57.133 29.630 0.00 0.00 0.00 1.28
48 49 8.502105 AAAAGACTAATATTTAGGAACACGGG 57.498 34.615 0.00 0.00 0.00 5.28
49 50 6.803366 AGACTAATATTTAGGAACACGGGT 57.197 37.500 0.00 0.00 0.00 5.28
50 51 7.902920 AGACTAATATTTAGGAACACGGGTA 57.097 36.000 0.00 0.00 0.00 3.69
51 52 7.949434 AGACTAATATTTAGGAACACGGGTAG 58.051 38.462 0.00 0.00 0.00 3.18
52 53 7.562821 AGACTAATATTTAGGAACACGGGTAGT 59.437 37.037 0.00 0.00 0.00 2.73
53 54 8.766994 ACTAATATTTAGGAACACGGGTAGTA 57.233 34.615 0.00 0.00 0.00 1.82
54 55 8.854117 ACTAATATTTAGGAACACGGGTAGTAG 58.146 37.037 0.00 0.00 0.00 2.57
55 56 3.874392 TTTAGGAACACGGGTAGTAGC 57.126 47.619 0.00 0.00 0.00 3.58
56 57 2.814805 TAGGAACACGGGTAGTAGCT 57.185 50.000 0.00 0.00 0.00 3.32
57 58 2.814805 AGGAACACGGGTAGTAGCTA 57.185 50.000 0.00 0.00 0.00 3.32
58 59 3.091633 AGGAACACGGGTAGTAGCTAA 57.908 47.619 0.00 0.00 0.00 3.09
59 60 3.639952 AGGAACACGGGTAGTAGCTAAT 58.360 45.455 0.00 0.00 0.00 1.73
60 61 4.796606 AGGAACACGGGTAGTAGCTAATA 58.203 43.478 0.00 0.00 0.00 0.98
61 62 5.392125 AGGAACACGGGTAGTAGCTAATAT 58.608 41.667 3.93 0.00 0.00 1.28
62 63 6.546484 AGGAACACGGGTAGTAGCTAATATA 58.454 40.000 3.93 0.00 0.00 0.86
63 64 7.180663 AGGAACACGGGTAGTAGCTAATATAT 58.819 38.462 3.93 0.00 0.00 0.86
64 65 7.673082 AGGAACACGGGTAGTAGCTAATATATT 59.327 37.037 3.93 2.97 0.00 1.28
65 66 8.309656 GGAACACGGGTAGTAGCTAATATATTT 58.690 37.037 3.93 0.00 0.00 1.40
66 67 9.702494 GAACACGGGTAGTAGCTAATATATTTT 57.298 33.333 3.93 0.00 0.00 1.82
90 91 9.921637 TTTTTCATGGAATACATTAAGACCAAC 57.078 29.630 0.00 0.00 37.84 3.77
91 92 8.642935 TTTCATGGAATACATTAAGACCAACA 57.357 30.769 0.00 0.00 37.84 3.33
92 93 7.624360 TCATGGAATACATTAAGACCAACAC 57.376 36.000 0.00 0.00 37.84 3.32
93 94 7.171653 TCATGGAATACATTAAGACCAACACA 58.828 34.615 0.00 0.00 37.84 3.72
94 95 7.667635 TCATGGAATACATTAAGACCAACACAA 59.332 33.333 0.00 0.00 37.84 3.33
95 96 8.469200 CATGGAATACATTAAGACCAACACAAT 58.531 33.333 0.00 0.00 37.84 2.71
96 97 8.415950 TGGAATACATTAAGACCAACACAATT 57.584 30.769 0.00 0.00 0.00 2.32
97 98 8.865090 TGGAATACATTAAGACCAACACAATTT 58.135 29.630 0.00 0.00 0.00 1.82
98 99 9.705290 GGAATACATTAAGACCAACACAATTTT 57.295 29.630 0.00 0.00 0.00 1.82
116 117 1.036707 TTTTTGGAGGTGGAAAGGCG 58.963 50.000 0.00 0.00 0.00 5.52
117 118 0.106419 TTTTGGAGGTGGAAAGGCGT 60.106 50.000 0.00 0.00 0.00 5.68
118 119 0.821711 TTTGGAGGTGGAAAGGCGTG 60.822 55.000 0.00 0.00 0.00 5.34
119 120 1.990160 TTGGAGGTGGAAAGGCGTGT 61.990 55.000 0.00 0.00 0.00 4.49
120 121 1.228154 GGAGGTGGAAAGGCGTGTT 60.228 57.895 0.00 0.00 0.00 3.32
121 122 1.235281 GGAGGTGGAAAGGCGTGTTC 61.235 60.000 0.00 0.00 0.00 3.18
122 123 0.534203 GAGGTGGAAAGGCGTGTTCA 60.534 55.000 1.98 0.00 0.00 3.18
123 124 0.535102 AGGTGGAAAGGCGTGTTCAG 60.535 55.000 1.98 0.00 0.00 3.02
124 125 0.534203 GGTGGAAAGGCGTGTTCAGA 60.534 55.000 1.98 0.00 0.00 3.27
125 126 0.586802 GTGGAAAGGCGTGTTCAGAC 59.413 55.000 1.98 0.00 0.00 3.51
126 127 0.534203 TGGAAAGGCGTGTTCAGACC 60.534 55.000 1.98 0.00 0.00 3.85
127 128 1.235281 GGAAAGGCGTGTTCAGACCC 61.235 60.000 1.98 0.00 0.00 4.46
128 129 1.228154 AAAGGCGTGTTCAGACCCC 60.228 57.895 0.00 0.00 0.00 4.95
129 130 2.692273 AAAGGCGTGTTCAGACCCCC 62.692 60.000 0.00 0.00 0.00 5.40
145 146 2.751436 CCCCCATGCCGAACACTG 60.751 66.667 0.00 0.00 0.00 3.66
146 147 3.443045 CCCCATGCCGAACACTGC 61.443 66.667 0.00 0.00 0.00 4.40
147 148 3.443045 CCCATGCCGAACACTGCC 61.443 66.667 0.00 0.00 0.00 4.85
148 149 3.443045 CCATGCCGAACACTGCCC 61.443 66.667 0.00 0.00 0.00 5.36
149 150 3.443045 CATGCCGAACACTGCCCC 61.443 66.667 0.00 0.00 0.00 5.80
150 151 3.650950 ATGCCGAACACTGCCCCT 61.651 61.111 0.00 0.00 0.00 4.79
151 152 3.628646 ATGCCGAACACTGCCCCTC 62.629 63.158 0.00 0.00 0.00 4.30
153 154 4.760047 CCGAACACTGCCCCTCCG 62.760 72.222 0.00 0.00 0.00 4.63
170 171 1.472662 CCGCCGAGGGGAATGTATCT 61.473 60.000 7.83 0.00 37.91 1.98
176 177 2.408565 GAGGGGAATGTATCTCACCCA 58.591 52.381 0.00 0.00 42.03 4.51
198 199 3.108288 TTGTGGTGCTACCGGTGCA 62.108 57.895 19.93 21.51 42.58 4.57
224 225 6.292919 CCGGATAGCTTAGCACAATTTAGAAC 60.293 42.308 7.07 0.00 0.00 3.01
227 228 8.624776 GGATAGCTTAGCACAATTTAGAACATT 58.375 33.333 7.07 0.00 0.00 2.71
263 264 5.901552 TCTAGCACATCGACATAACATCAA 58.098 37.500 0.00 0.00 0.00 2.57
328 329 9.453572 TTTTGCTTGAGATATAGAAATGTCAGT 57.546 29.630 0.00 0.00 31.53 3.41
352 353 7.972277 AGTTTTGACATCAATGTGATAATGCTC 59.028 33.333 0.00 0.00 41.95 4.26
353 354 7.634671 TTTGACATCAATGTGATAATGCTCT 57.365 32.000 0.00 0.00 41.95 4.09
395 396 9.946165 CTTATGTTATGTACTATTCTGTGTCGA 57.054 33.333 0.00 0.00 0.00 4.20
422 424 6.900568 TTTGTTATTTTTGTTCCTGTGCTG 57.099 33.333 0.00 0.00 0.00 4.41
440 442 9.859427 CCTGTGCTGAATTTTGAATCTAAATTA 57.141 29.630 13.61 0.00 35.83 1.40
505 507 8.702163 ATGCGGTAATTTTCCTTAGAATTTTG 57.298 30.769 0.00 0.00 0.00 2.44
523 535 2.851263 TGAAATGTGCTACGGGAGTT 57.149 45.000 0.00 0.00 43.33 3.01
532 770 2.094182 TGCTACGGGAGTTTGATGAGTC 60.094 50.000 0.00 0.00 43.33 3.36
536 774 2.196749 CGGGAGTTTGATGAGTCGATG 58.803 52.381 0.00 0.00 0.00 3.84
560 852 5.590530 AACTGCAAAGTGAAATTACACCA 57.409 34.783 0.00 0.00 41.12 4.17
593 885 4.431086 GCGAAATGAAAAATGAACGGTTCG 60.431 41.667 15.52 1.44 38.59 3.95
623 915 2.756283 AGCCGTTCCCTCTCCTCG 60.756 66.667 0.00 0.00 0.00 4.63
670 962 4.394712 CCTCCACGGCTCCACACC 62.395 72.222 0.00 0.00 0.00 4.16
744 1036 1.807981 CGCATCGCTTACCCGTGAA 60.808 57.895 0.00 0.00 0.00 3.18
845 1137 1.642037 CTCTCGGTCCGTCGTTGCTA 61.642 60.000 11.88 0.00 0.00 3.49
954 1246 0.034477 CCAGGGGCGTTAACCAATCT 60.034 55.000 0.00 0.00 0.00 2.40
958 1250 0.963355 GGGCGTTAACCAATCTGGCA 60.963 55.000 0.00 0.00 42.67 4.92
1169 2796 2.672908 CCCTGTTACCCGAACCCC 59.327 66.667 0.00 0.00 37.22 4.95
1236 2871 6.346096 GTTAGGACCTCTGCATGTTTACATA 58.654 40.000 0.00 0.00 34.26 2.29
1241 2876 7.499232 AGGACCTCTGCATGTTTACATAATTAC 59.501 37.037 0.00 0.00 34.26 1.89
1243 2878 8.752005 ACCTCTGCATGTTTACATAATTACAT 57.248 30.769 0.00 0.00 34.26 2.29
1271 2914 9.352784 CAATCTGAGAGGATAATATTTCTCGAC 57.647 37.037 9.32 7.71 39.08 4.20
1300 2944 4.553547 GCTTGGAATCAAATTCGAGATCGG 60.554 45.833 1.91 0.00 40.17 4.18
1301 2945 4.400529 TGGAATCAAATTCGAGATCGGA 57.599 40.909 1.91 0.00 40.17 4.55
1302 2946 4.960938 TGGAATCAAATTCGAGATCGGAT 58.039 39.130 1.91 0.00 39.70 4.18
1305 2949 2.394708 TCAAATTCGAGATCGGATCGC 58.605 47.619 12.08 11.62 36.37 4.58
1306 2950 1.457303 CAAATTCGAGATCGGATCGCC 59.543 52.381 14.79 9.13 36.37 5.54
1316 2960 3.620785 GGATCGCCCGGAGCTCAT 61.621 66.667 17.19 0.00 40.39 2.90
1317 2961 2.423446 GATCGCCCGGAGCTCATT 59.577 61.111 17.19 0.00 40.39 2.57
1318 2962 1.666011 GATCGCCCGGAGCTCATTA 59.334 57.895 17.19 0.00 40.39 1.90
1319 2963 0.033504 GATCGCCCGGAGCTCATTAA 59.966 55.000 17.19 0.00 40.39 1.40
1320 2964 0.249911 ATCGCCCGGAGCTCATTAAC 60.250 55.000 17.19 0.00 40.39 2.01
1321 2965 1.153449 CGCCCGGAGCTCATTAACA 60.153 57.895 17.19 0.00 40.39 2.41
1322 2966 0.532862 CGCCCGGAGCTCATTAACAT 60.533 55.000 17.19 0.00 40.39 2.71
1323 2967 1.270094 CGCCCGGAGCTCATTAACATA 60.270 52.381 17.19 0.00 40.39 2.29
1324 2968 2.612972 CGCCCGGAGCTCATTAACATAT 60.613 50.000 17.19 0.00 40.39 1.78
1325 2969 3.412386 GCCCGGAGCTCATTAACATATT 58.588 45.455 17.19 0.00 38.99 1.28
1326 2970 3.189287 GCCCGGAGCTCATTAACATATTG 59.811 47.826 17.19 0.00 38.99 1.90
1327 2971 3.189287 CCCGGAGCTCATTAACATATTGC 59.811 47.826 17.19 0.00 0.00 3.56
1328 2972 4.067896 CCGGAGCTCATTAACATATTGCT 58.932 43.478 17.19 0.00 0.00 3.91
1329 2973 4.516698 CCGGAGCTCATTAACATATTGCTT 59.483 41.667 17.19 0.00 0.00 3.91
1330 2974 5.446709 CGGAGCTCATTAACATATTGCTTG 58.553 41.667 17.19 0.00 0.00 4.01
1331 2975 5.218139 GGAGCTCATTAACATATTGCTTGC 58.782 41.667 17.19 0.00 0.00 4.01
1332 2976 5.009410 GGAGCTCATTAACATATTGCTTGCT 59.991 40.000 17.19 0.00 0.00 3.91
1333 2977 6.460676 GGAGCTCATTAACATATTGCTTGCTT 60.461 38.462 17.19 0.00 0.00 3.91
1334 2978 6.270815 AGCTCATTAACATATTGCTTGCTTG 58.729 36.000 0.00 0.00 0.00 4.01
1335 2979 5.051240 GCTCATTAACATATTGCTTGCTTGC 60.051 40.000 0.00 0.00 0.00 4.01
1336 2980 6.211587 TCATTAACATATTGCTTGCTTGCT 57.788 33.333 3.47 0.00 0.00 3.91
1337 2981 6.037726 TCATTAACATATTGCTTGCTTGCTG 58.962 36.000 3.47 0.00 0.00 4.41
1338 2982 2.953466 ACATATTGCTTGCTTGCTGG 57.047 45.000 3.47 0.00 0.00 4.85
1339 2983 2.173519 ACATATTGCTTGCTTGCTGGT 58.826 42.857 3.47 0.00 0.00 4.00
1340 2984 2.564062 ACATATTGCTTGCTTGCTGGTT 59.436 40.909 3.47 0.00 0.00 3.67
1341 2985 3.184541 CATATTGCTTGCTTGCTGGTTC 58.815 45.455 3.47 0.00 0.00 3.62
1342 2986 1.042229 ATTGCTTGCTTGCTGGTTCA 58.958 45.000 3.47 0.00 0.00 3.18
1343 2987 0.386476 TTGCTTGCTTGCTGGTTCAG 59.614 50.000 3.47 0.00 34.12 3.02
1344 2988 0.466007 TGCTTGCTTGCTGGTTCAGA 60.466 50.000 0.00 0.00 32.44 3.27
1345 2989 0.886563 GCTTGCTTGCTGGTTCAGAT 59.113 50.000 0.00 0.00 32.44 2.90
1352 2996 3.127721 GCTTGCTGGTTCAGATTTAGACC 59.872 47.826 0.00 0.00 32.44 3.85
1355 2999 4.326826 TGCTGGTTCAGATTTAGACCTTG 58.673 43.478 0.00 0.00 32.44 3.61
1356 3000 4.041567 TGCTGGTTCAGATTTAGACCTTGA 59.958 41.667 0.00 0.00 32.44 3.02
1377 3021 2.949142 TGCGTTCAAGCGTATTCTACA 58.051 42.857 0.00 0.00 40.67 2.74
1443 3114 8.832521 ACATGTAAAGAATACACGAAAGAAACA 58.167 29.630 0.00 0.00 0.00 2.83
1471 3289 7.130269 CACTAACCGGTTGAGAAAGTAAAAAG 58.870 38.462 30.08 15.81 0.00 2.27
1498 3320 7.026562 AGATGTCTATATTCTTGCTTCGATCG 58.973 38.462 9.36 9.36 0.00 3.69
1573 3401 9.738832 CTCATAGACTGATATATGAATGAGCTG 57.261 37.037 0.00 0.00 38.30 4.24
1585 3413 3.072330 TGAATGAGCTGTTACAGAACCCA 59.928 43.478 17.40 7.59 34.38 4.51
1590 3418 4.041075 TGAGCTGTTACAGAACCCATGTTA 59.959 41.667 17.40 0.00 33.97 2.41
1591 3419 5.179452 AGCTGTTACAGAACCCATGTTAT 57.821 39.130 17.40 0.00 33.97 1.89
1593 3421 6.010219 AGCTGTTACAGAACCCATGTTATTT 58.990 36.000 17.40 0.00 33.97 1.40
1594 3422 6.151144 AGCTGTTACAGAACCCATGTTATTTC 59.849 38.462 17.40 0.00 33.97 2.17
1595 3423 6.072175 GCTGTTACAGAACCCATGTTATTTCA 60.072 38.462 17.40 0.00 33.97 2.69
1596 3424 7.447374 TGTTACAGAACCCATGTTATTTCAG 57.553 36.000 0.00 0.00 33.97 3.02
1599 3427 3.763360 CAGAACCCATGTTATTTCAGCCA 59.237 43.478 0.00 0.00 33.97 4.75
1600 3428 4.220382 CAGAACCCATGTTATTTCAGCCAA 59.780 41.667 0.00 0.00 33.97 4.52
1645 4602 9.185192 CAAGTCTTTCTTAACAATCCAATTGTC 57.815 33.333 4.43 0.00 42.38 3.18
1664 4627 4.565022 TGTCGTGCATTTCACTAATCTGA 58.435 39.130 0.00 0.00 43.46 3.27
1683 4649 8.489990 AATCTGAGAGTAGACATTTCATTGTG 57.510 34.615 0.00 0.00 0.00 3.33
1705 4671 5.862323 GTGTTAGCTTTCGATGACTCTTACA 59.138 40.000 0.00 0.00 0.00 2.41
1719 4685 8.814038 ATGACTCTTACATAGGCTTCAATTTT 57.186 30.769 0.00 0.00 0.00 1.82
1872 5527 1.333636 ATGTGGAGAGCTTCGGGGAG 61.334 60.000 0.00 0.00 0.00 4.30
1962 5617 4.283212 CCCTCCTCTGATCAGAAGGTAATC 59.717 50.000 29.47 0.00 34.91 1.75
2067 5722 5.333798 GCTAAACAATTATATCGAGCGCCAA 60.334 40.000 2.29 0.00 0.00 4.52
2095 5750 0.741915 GGGCGGTTTTGTTGAAGTGA 59.258 50.000 0.00 0.00 0.00 3.41
2122 5777 2.093816 TCTGCTACAAGCTCACAGGATG 60.094 50.000 0.03 0.00 42.97 3.51
2152 5807 5.326069 AGTCTGTTACTGTGAGTAGGACAT 58.674 41.667 0.00 0.00 36.93 3.06
2325 5981 4.110036 TGACGACGATGAACTGATTGAT 57.890 40.909 0.00 0.00 0.00 2.57
2410 6066 5.454966 ACAAACCCTCTGACCTTGTTTAAT 58.545 37.500 0.00 0.00 0.00 1.40
2436 6092 6.489700 TCTTGTGAAGATGTTTAATTCAGGCA 59.510 34.615 0.00 0.00 33.83 4.75
2457 6204 1.595882 GCTGAGGCTGAGCAGAAGA 59.404 57.895 21.41 0.00 36.40 2.87
2523 6270 1.532868 CAGCTTGTGGCAGTGTAAGTC 59.467 52.381 0.00 0.00 44.79 3.01
2526 6273 2.554032 GCTTGTGGCAGTGTAAGTCAAT 59.446 45.455 0.00 0.00 41.35 2.57
2531 6279 6.701145 TGTGGCAGTGTAAGTCAATTTAAA 57.299 33.333 0.00 0.00 0.00 1.52
2533 6281 5.629435 GTGGCAGTGTAAGTCAATTTAAAGC 59.371 40.000 0.00 0.00 0.00 3.51
2563 6312 1.237285 GCAACGCCACTGGTGATTCT 61.237 55.000 15.85 0.00 36.58 2.40
2581 6330 3.162147 TCTCACTAGCCAACTGACTCT 57.838 47.619 0.00 0.00 0.00 3.24
2616 6388 9.364989 GACTGATTATATCTTACATTCCTCTGC 57.635 37.037 0.00 0.00 0.00 4.26
2622 6394 4.265904 TCTTACATTCCTCTGCGAAACA 57.734 40.909 0.00 0.00 0.00 2.83
2656 6432 4.690719 TTGGGCGATGCGTTCCGT 62.691 61.111 0.00 0.00 0.00 4.69
2731 6507 8.798975 AGGTAACCAATCTCTATTCCTCATTA 57.201 34.615 0.00 0.00 37.17 1.90
2759 6563 6.809196 ACTTGACTAGATTCATTCACGAAGAC 59.191 38.462 0.00 0.00 0.00 3.01
2774 6578 2.354704 CGAAGACAGCTTTGGGGTATGA 60.355 50.000 0.00 0.00 33.61 2.15
2776 6580 1.282157 AGACAGCTTTGGGGTATGACC 59.718 52.381 0.00 0.00 37.60 4.02
2784 6588 2.561209 TGGGGTATGACCTGAGCTTA 57.439 50.000 0.00 0.00 38.64 3.09
2830 6637 3.516615 CTCGTTTCTTCATCTCCAGGTC 58.483 50.000 0.00 0.00 0.00 3.85
2853 6660 4.399303 CACCTTGTCTGACAACTTCCTTTT 59.601 41.667 18.69 0.00 33.96 2.27
2856 6663 3.963129 TGTCTGACAACTTCCTTTTGGT 58.037 40.909 8.27 0.00 41.38 3.67
2905 6716 2.523015 GATGCGAAATGGCTTGTTCAG 58.477 47.619 0.00 0.00 0.00 3.02
2946 6761 7.881232 AGAAAGGAATCTACGTTTTTCATGGTA 59.119 33.333 0.00 0.00 0.00 3.25
2994 6810 2.380084 AGAAGATAACGCGCTTGGAA 57.620 45.000 5.73 0.00 0.00 3.53
2997 6813 1.299541 AGATAACGCGCTTGGAATGG 58.700 50.000 5.73 0.00 0.00 3.16
3005 6821 0.394352 CGCTTGGAATGGGGTAGCTT 60.394 55.000 0.00 0.00 0.00 3.74
3016 6832 1.835531 GGGGTAGCTTGTGTTAGCCTA 59.164 52.381 0.00 0.00 43.86 3.93
3060 6876 0.526524 GTTGAGGTGAGAGCGGATCG 60.527 60.000 0.00 0.00 0.00 3.69
3063 6879 1.377366 GAGGTGAGAGCGGATCGTGA 61.377 60.000 0.00 0.00 0.00 4.35
3069 6885 3.685214 GAGCGGATCGTGAGTGCGT 62.685 63.158 0.00 0.00 32.72 5.24
3073 6889 0.093026 CGGATCGTGAGTGCGTTTTC 59.907 55.000 0.00 0.00 0.00 2.29
3086 6902 2.739913 TGCGTTTTCTATTTGGGACGAG 59.260 45.455 0.00 0.00 32.73 4.18
3091 6907 6.324819 CGTTTTCTATTTGGGACGAGTACTA 58.675 40.000 0.00 0.00 32.73 1.82
3101 6917 5.195185 TGGGACGAGTACTATACATGTCAA 58.805 41.667 0.00 0.00 37.04 3.18
3102 6918 5.298527 TGGGACGAGTACTATACATGTCAAG 59.701 44.000 0.00 3.48 37.04 3.02
3124 6940 2.334971 TGCTGCAATGACGATGTTTG 57.665 45.000 0.00 0.00 0.00 2.93
3146 6962 8.826710 GTTTGCATATACTAGTAATCTTGCACA 58.173 33.333 21.82 16.63 38.45 4.57
3147 6963 7.946655 TGCATATACTAGTAATCTTGCACAC 57.053 36.000 19.78 1.88 34.24 3.82
3167 7033 7.021196 GCACACGCAATTCTATTAAAAGAGAA 58.979 34.615 2.54 2.54 38.11 2.87
3289 7155 9.926158 TCACAAATAGCATTACATTGAAATGTT 57.074 25.926 13.53 0.00 46.95 2.71
3366 7232 3.370104 ACATTGTGGGTTGTGAGGAAAA 58.630 40.909 0.00 0.00 0.00 2.29
3367 7233 3.384467 ACATTGTGGGTTGTGAGGAAAAG 59.616 43.478 0.00 0.00 0.00 2.27
3382 7248 3.068732 AGGAAAAGGAAACAAAGCAGAGC 59.931 43.478 0.00 0.00 0.00 4.09
3396 7262 4.342862 AGCAGAGCTTAGTCACTTGAAA 57.657 40.909 0.00 0.00 33.89 2.69
3399 7295 4.142730 GCAGAGCTTAGTCACTTGAAATGG 60.143 45.833 0.00 0.00 0.00 3.16
3403 7299 4.072131 GCTTAGTCACTTGAAATGGACCA 58.928 43.478 0.00 0.00 0.00 4.02
3413 7309 0.706433 AAATGGACCAGCACCAGGAT 59.294 50.000 0.00 0.00 40.89 3.24
3414 7310 0.257039 AATGGACCAGCACCAGGATC 59.743 55.000 0.00 0.00 40.89 3.36
3415 7311 0.915872 ATGGACCAGCACCAGGATCA 60.916 55.000 0.00 0.00 40.89 2.92
3416 7312 1.133181 TGGACCAGCACCAGGATCAA 61.133 55.000 0.00 0.00 33.22 2.57
3418 7314 1.457346 GACCAGCACCAGGATCAAAG 58.543 55.000 0.00 0.00 0.00 2.77
3419 7315 0.773644 ACCAGCACCAGGATCAAAGT 59.226 50.000 0.00 0.00 0.00 2.66
3426 7325 2.030540 CACCAGGATCAAAGTGCAAGTG 60.031 50.000 0.00 0.00 0.00 3.16
3430 7329 4.460382 CCAGGATCAAAGTGCAAGTGTTAT 59.540 41.667 0.00 0.00 0.00 1.89
3433 7332 5.769662 AGGATCAAAGTGCAAGTGTTATTGA 59.230 36.000 0.00 0.00 31.55 2.57
3452 7351 3.476552 TGAGAGGCACTAAAAGGTGTTG 58.523 45.455 0.00 0.00 41.55 3.33
3454 7353 3.477530 AGAGGCACTAAAAGGTGTTGTC 58.522 45.455 0.00 0.00 41.55 3.18
3460 7359 4.497507 GCACTAAAAGGTGTTGTCCAGTTC 60.498 45.833 0.00 0.00 39.21 3.01
3469 7368 2.940410 TGTTGTCCAGTTCGAAGGAAAC 59.060 45.455 7.65 13.08 35.29 2.78
3517 7416 2.487762 AGTTGTACATGAACATTGCGGG 59.512 45.455 0.00 0.00 0.00 6.13
3543 7442 3.399879 GTGTTAAACCAGCGCCATG 57.600 52.632 2.29 0.00 0.00 3.66
3544 7443 0.878416 GTGTTAAACCAGCGCCATGA 59.122 50.000 2.29 0.00 0.00 3.07
3545 7444 1.472480 GTGTTAAACCAGCGCCATGAT 59.528 47.619 2.29 0.00 0.00 2.45
3546 7445 2.680841 GTGTTAAACCAGCGCCATGATA 59.319 45.455 2.29 0.00 0.00 2.15
3547 7446 2.680841 TGTTAAACCAGCGCCATGATAC 59.319 45.455 2.29 0.00 0.00 2.24
3548 7447 1.961793 TAAACCAGCGCCATGATACC 58.038 50.000 2.29 0.00 0.00 2.73
3549 7448 0.034574 AAACCAGCGCCATGATACCA 60.035 50.000 2.29 0.00 0.00 3.25
3550 7449 0.034574 AACCAGCGCCATGATACCAA 60.035 50.000 2.29 0.00 0.00 3.67
3551 7450 0.034574 ACCAGCGCCATGATACCAAA 60.035 50.000 2.29 0.00 0.00 3.28
3552 7451 0.664761 CCAGCGCCATGATACCAAAG 59.335 55.000 2.29 0.00 0.00 2.77
3553 7452 1.382522 CAGCGCCATGATACCAAAGT 58.617 50.000 2.29 0.00 0.00 2.66
3554 7453 1.064505 CAGCGCCATGATACCAAAGTG 59.935 52.381 2.29 0.00 0.00 3.16
3555 7454 0.248621 GCGCCATGATACCAAAGTGC 60.249 55.000 0.00 0.00 0.00 4.40
3556 7455 0.381801 CGCCATGATACCAAAGTGCC 59.618 55.000 0.00 0.00 0.00 5.01
3557 7456 0.746659 GCCATGATACCAAAGTGCCC 59.253 55.000 0.00 0.00 0.00 5.36
3558 7457 1.402787 CCATGATACCAAAGTGCCCC 58.597 55.000 0.00 0.00 0.00 5.80
3559 7458 1.063717 CCATGATACCAAAGTGCCCCT 60.064 52.381 0.00 0.00 0.00 4.79
3560 7459 2.026641 CATGATACCAAAGTGCCCCTG 58.973 52.381 0.00 0.00 0.00 4.45
3561 7460 0.331278 TGATACCAAAGTGCCCCTGG 59.669 55.000 0.00 0.00 36.24 4.45
3562 7461 0.623723 GATACCAAAGTGCCCCTGGA 59.376 55.000 0.00 0.00 34.16 3.86
3563 7462 0.625849 ATACCAAAGTGCCCCTGGAG 59.374 55.000 0.00 0.00 34.16 3.86
3564 7463 0.770557 TACCAAAGTGCCCCTGGAGT 60.771 55.000 0.00 0.00 34.16 3.85
3565 7464 1.153756 CCAAAGTGCCCCTGGAGTT 59.846 57.895 0.00 0.00 31.38 3.01
3566 7465 1.181098 CCAAAGTGCCCCTGGAGTTG 61.181 60.000 0.00 0.00 31.38 3.16
3567 7466 0.468029 CAAAGTGCCCCTGGAGTTGT 60.468 55.000 0.00 0.00 0.00 3.32
3568 7467 1.145571 AAAGTGCCCCTGGAGTTGTA 58.854 50.000 0.00 0.00 0.00 2.41
3569 7468 1.372501 AAGTGCCCCTGGAGTTGTAT 58.627 50.000 0.00 0.00 0.00 2.29
3570 7469 0.912486 AGTGCCCCTGGAGTTGTATC 59.088 55.000 0.00 0.00 0.00 2.24
3571 7470 0.618458 GTGCCCCTGGAGTTGTATCA 59.382 55.000 0.00 0.00 0.00 2.15
3572 7471 1.212935 GTGCCCCTGGAGTTGTATCAT 59.787 52.381 0.00 0.00 0.00 2.45
3573 7472 2.438021 GTGCCCCTGGAGTTGTATCATA 59.562 50.000 0.00 0.00 0.00 2.15
3574 7473 2.438021 TGCCCCTGGAGTTGTATCATAC 59.562 50.000 0.00 0.00 0.00 2.39
3575 7474 2.706190 GCCCCTGGAGTTGTATCATACT 59.294 50.000 0.00 0.00 0.00 2.12
3576 7475 3.495100 GCCCCTGGAGTTGTATCATACTG 60.495 52.174 0.00 0.00 0.00 2.74
3577 7476 3.711704 CCCCTGGAGTTGTATCATACTGT 59.288 47.826 0.00 0.00 0.00 3.55
3578 7477 4.899457 CCCCTGGAGTTGTATCATACTGTA 59.101 45.833 0.00 0.00 0.00 2.74
3579 7478 5.544176 CCCCTGGAGTTGTATCATACTGTAT 59.456 44.000 0.00 0.00 0.00 2.29
3580 7479 6.043243 CCCCTGGAGTTGTATCATACTGTATT 59.957 42.308 0.00 0.00 0.00 1.89
3581 7480 7.420214 CCCCTGGAGTTGTATCATACTGTATTT 60.420 40.741 0.00 0.00 0.00 1.40
3582 7481 7.657761 CCCTGGAGTTGTATCATACTGTATTTC 59.342 40.741 0.00 0.00 0.00 2.17
3583 7482 8.204160 CCTGGAGTTGTATCATACTGTATTTCA 58.796 37.037 0.00 0.00 0.00 2.69
3584 7483 8.942338 TGGAGTTGTATCATACTGTATTTCAC 57.058 34.615 0.00 0.00 0.00 3.18
3585 7484 8.536175 TGGAGTTGTATCATACTGTATTTCACA 58.464 33.333 0.00 0.03 35.30 3.58
3586 7485 9.547753 GGAGTTGTATCATACTGTATTTCACAT 57.452 33.333 0.00 0.00 36.29 3.21
3602 7501 9.821662 GTATTTCACATACAAGTACTTTTCACC 57.178 33.333 5.07 0.00 0.00 4.02
3632 7531 0.779997 AGGGACTGCCAACCAGAAAT 59.220 50.000 0.00 0.00 44.64 2.17
3667 7566 8.682936 ATCAACTGGTCTTGGATTTCATATAC 57.317 34.615 0.00 0.00 0.00 1.47
3668 7567 6.761242 TCAACTGGTCTTGGATTTCATATACG 59.239 38.462 0.00 0.00 0.00 3.06
3669 7568 6.479972 ACTGGTCTTGGATTTCATATACGA 57.520 37.500 0.00 0.00 0.00 3.43
3670 7569 6.884832 ACTGGTCTTGGATTTCATATACGAA 58.115 36.000 0.00 0.00 0.00 3.85
3671 7570 7.335627 ACTGGTCTTGGATTTCATATACGAAA 58.664 34.615 0.00 0.00 39.13 3.46
3672 7571 7.993183 ACTGGTCTTGGATTTCATATACGAAAT 59.007 33.333 6.48 6.48 45.91 2.17
3673 7572 8.746052 TGGTCTTGGATTTCATATACGAAATT 57.254 30.769 8.09 0.00 43.86 1.82
3674 7573 8.620416 TGGTCTTGGATTTCATATACGAAATTG 58.380 33.333 8.09 1.31 43.86 2.32
3675 7574 7.591426 GGTCTTGGATTTCATATACGAAATTGC 59.409 37.037 8.09 0.00 43.86 3.56
3676 7575 8.345565 GTCTTGGATTTCATATACGAAATTGCT 58.654 33.333 8.09 0.00 43.86 3.91
3677 7576 8.559536 TCTTGGATTTCATATACGAAATTGCTC 58.440 33.333 8.09 0.00 43.86 4.26
3678 7577 8.450578 TTGGATTTCATATACGAAATTGCTCT 57.549 30.769 8.09 0.00 43.86 4.09
3679 7578 7.864686 TGGATTTCATATACGAAATTGCTCTG 58.135 34.615 8.09 0.00 43.86 3.35
3680 7579 6.798959 GGATTTCATATACGAAATTGCTCTGC 59.201 38.462 8.09 0.00 43.86 4.26
3681 7580 6.676237 TTTCATATACGAAATTGCTCTGCA 57.324 33.333 0.00 0.00 31.04 4.41
3682 7581 6.866010 TTCATATACGAAATTGCTCTGCAT 57.134 33.333 0.00 0.00 38.76 3.96
3683 7582 7.961325 TTCATATACGAAATTGCTCTGCATA 57.039 32.000 0.00 0.00 38.76 3.14
3684 7583 8.552083 TTCATATACGAAATTGCTCTGCATAT 57.448 30.769 0.00 0.00 38.76 1.78
3685 7584 7.967178 TCATATACGAAATTGCTCTGCATATG 58.033 34.615 0.00 0.00 38.76 1.78
3686 7585 7.818930 TCATATACGAAATTGCTCTGCATATGA 59.181 33.333 6.97 0.00 38.76 2.15
3687 7586 4.542662 ACGAAATTGCTCTGCATATGAC 57.457 40.909 6.97 0.00 38.76 3.06
3688 7587 4.194640 ACGAAATTGCTCTGCATATGACT 58.805 39.130 6.97 0.00 38.76 3.41
3689 7588 4.637534 ACGAAATTGCTCTGCATATGACTT 59.362 37.500 6.97 0.00 38.76 3.01
3690 7589 5.124457 ACGAAATTGCTCTGCATATGACTTT 59.876 36.000 6.97 0.00 38.76 2.66
3691 7590 6.316140 ACGAAATTGCTCTGCATATGACTTTA 59.684 34.615 6.97 0.00 38.76 1.85
3692 7591 7.148255 ACGAAATTGCTCTGCATATGACTTTAA 60.148 33.333 6.97 0.00 38.76 1.52
3693 7592 7.697710 CGAAATTGCTCTGCATATGACTTTAAA 59.302 33.333 6.97 0.00 38.76 1.52
3694 7593 9.525409 GAAATTGCTCTGCATATGACTTTAAAT 57.475 29.630 6.97 0.00 38.76 1.40
3699 7598 8.925700 TGCTCTGCATATGACTTTAAATATACG 58.074 33.333 6.97 0.00 31.71 3.06
3700 7599 9.140286 GCTCTGCATATGACTTTAAATATACGA 57.860 33.333 6.97 0.00 0.00 3.43
3704 7603 9.936759 TGCATATGACTTTAAATATACGATCCA 57.063 29.630 6.97 0.00 0.00 3.41
3715 7614 3.817787 CGATCCACGTCCGACCTA 58.182 61.111 0.00 0.00 37.22 3.08
3716 7615 1.647629 CGATCCACGTCCGACCTAG 59.352 63.158 0.00 0.00 37.22 3.02
3717 7616 1.094073 CGATCCACGTCCGACCTAGT 61.094 60.000 0.00 0.00 37.22 2.57
3718 7617 0.381089 GATCCACGTCCGACCTAGTG 59.619 60.000 0.00 0.00 0.00 2.74
3719 7618 0.034767 ATCCACGTCCGACCTAGTGA 60.035 55.000 6.61 0.00 36.79 3.41
3720 7619 0.034767 TCCACGTCCGACCTAGTGAT 60.035 55.000 6.61 0.00 36.79 3.06
3721 7620 0.381089 CCACGTCCGACCTAGTGATC 59.619 60.000 6.61 0.00 36.79 2.92
3722 7621 0.381089 CACGTCCGACCTAGTGATCC 59.619 60.000 0.00 0.00 36.79 3.36
3723 7622 0.750911 ACGTCCGACCTAGTGATCCC 60.751 60.000 0.00 0.00 0.00 3.85
3724 7623 0.750546 CGTCCGACCTAGTGATCCCA 60.751 60.000 0.00 0.00 0.00 4.37
3725 7624 0.745468 GTCCGACCTAGTGATCCCAC 59.255 60.000 0.00 0.00 43.50 4.61
3726 7625 0.396695 TCCGACCTAGTGATCCCACC 60.397 60.000 0.00 0.00 44.22 4.61
3727 7626 0.686441 CCGACCTAGTGATCCCACCA 60.686 60.000 0.00 0.00 44.22 4.17
3728 7627 1.414158 CGACCTAGTGATCCCACCAT 58.586 55.000 0.00 0.00 44.22 3.55
3729 7628 1.762957 CGACCTAGTGATCCCACCATT 59.237 52.381 0.00 0.00 44.22 3.16
3730 7629 2.483714 CGACCTAGTGATCCCACCATTG 60.484 54.545 0.00 0.00 44.22 2.82
3731 7630 1.212935 ACCTAGTGATCCCACCATTGC 59.787 52.381 0.00 0.00 44.22 3.56
3732 7631 1.477558 CCTAGTGATCCCACCATTGCC 60.478 57.143 0.00 0.00 44.22 4.52
3733 7632 1.212688 CTAGTGATCCCACCATTGCCA 59.787 52.381 0.00 0.00 44.22 4.92
3734 7633 0.632835 AGTGATCCCACCATTGCCAT 59.367 50.000 0.00 0.00 44.22 4.40
3735 7634 1.007479 AGTGATCCCACCATTGCCATT 59.993 47.619 0.00 0.00 44.22 3.16
3736 7635 1.137479 GTGATCCCACCATTGCCATTG 59.863 52.381 0.00 0.00 37.33 2.82
3737 7636 1.006878 TGATCCCACCATTGCCATTGA 59.993 47.619 0.00 0.00 0.00 2.57
3738 7637 2.322658 GATCCCACCATTGCCATTGAT 58.677 47.619 0.00 0.00 0.00 2.57
3739 7638 1.487300 TCCCACCATTGCCATTGATG 58.513 50.000 0.00 0.00 0.00 3.07
3740 7639 0.179067 CCCACCATTGCCATTGATGC 60.179 55.000 0.00 0.00 0.00 3.91
3741 7640 0.537653 CCACCATTGCCATTGATGCA 59.462 50.000 0.00 0.00 36.84 3.96
3742 7641 1.472552 CCACCATTGCCATTGATGCAG 60.473 52.381 0.00 0.00 40.35 4.41
3743 7642 1.478916 CACCATTGCCATTGATGCAGA 59.521 47.619 0.00 0.00 40.35 4.26
3744 7643 1.754803 ACCATTGCCATTGATGCAGAG 59.245 47.619 0.00 0.00 40.35 3.35
3745 7644 2.028876 CCATTGCCATTGATGCAGAGA 58.971 47.619 0.00 0.00 40.35 3.10
3746 7645 2.628178 CCATTGCCATTGATGCAGAGAT 59.372 45.455 0.00 0.00 40.35 2.75
3747 7646 3.069586 CCATTGCCATTGATGCAGAGATT 59.930 43.478 0.00 0.00 40.35 2.40
3748 7647 4.442893 CCATTGCCATTGATGCAGAGATTT 60.443 41.667 0.00 0.00 40.35 2.17
3749 7648 3.793797 TGCCATTGATGCAGAGATTTG 57.206 42.857 0.00 0.00 34.05 2.32
3750 7649 3.358118 TGCCATTGATGCAGAGATTTGA 58.642 40.909 0.00 0.00 34.05 2.69
3751 7650 3.958147 TGCCATTGATGCAGAGATTTGAT 59.042 39.130 0.00 0.00 34.05 2.57
3752 7651 4.037565 TGCCATTGATGCAGAGATTTGATC 59.962 41.667 0.00 0.00 34.05 2.92
3753 7652 4.037565 GCCATTGATGCAGAGATTTGATCA 59.962 41.667 0.00 0.00 0.00 2.92
3754 7653 5.763088 CCATTGATGCAGAGATTTGATCAG 58.237 41.667 0.00 0.00 0.00 2.90
3755 7654 5.531287 CCATTGATGCAGAGATTTGATCAGA 59.469 40.000 0.00 0.00 0.00 3.27
3756 7655 6.293680 CCATTGATGCAGAGATTTGATCAGAG 60.294 42.308 0.00 0.00 0.00 3.35
3757 7656 4.704965 TGATGCAGAGATTTGATCAGAGG 58.295 43.478 0.00 0.00 0.00 3.69
3758 7657 3.555527 TGCAGAGATTTGATCAGAGGG 57.444 47.619 0.00 0.00 0.00 4.30
3759 7658 2.842496 TGCAGAGATTTGATCAGAGGGT 59.158 45.455 0.00 0.00 0.00 4.34
3760 7659 3.204526 GCAGAGATTTGATCAGAGGGTG 58.795 50.000 0.00 0.00 0.00 4.61
3761 7660 3.118482 GCAGAGATTTGATCAGAGGGTGA 60.118 47.826 0.00 0.00 40.38 4.02
3762 7661 4.440880 CAGAGATTTGATCAGAGGGTGAC 58.559 47.826 0.00 0.00 38.28 3.67
3763 7662 4.161942 CAGAGATTTGATCAGAGGGTGACT 59.838 45.833 0.00 0.00 38.28 3.41
3764 7663 4.161942 AGAGATTTGATCAGAGGGTGACTG 59.838 45.833 0.00 0.00 38.28 3.51
3765 7664 4.099633 AGATTTGATCAGAGGGTGACTGA 58.900 43.478 0.00 0.00 46.17 3.41
3766 7665 3.969287 TTTGATCAGAGGGTGACTGAG 57.031 47.619 0.00 0.00 45.49 3.35
3767 7666 1.189752 TGATCAGAGGGTGACTGAGC 58.810 55.000 0.00 0.00 46.59 4.26
3768 7667 1.189752 GATCAGAGGGTGACTGAGCA 58.810 55.000 0.00 0.00 45.98 4.26
3769 7668 1.136695 GATCAGAGGGTGACTGAGCAG 59.863 57.143 0.00 0.00 45.98 4.24
3770 7669 0.178950 TCAGAGGGTGACTGAGCAGT 60.179 55.000 2.20 2.20 45.84 4.40
3771 7670 0.037512 CAGAGGGTGACTGAGCAGTG 60.038 60.000 8.03 0.00 42.66 3.66
3772 7671 0.470833 AGAGGGTGACTGAGCAGTGT 60.471 55.000 8.03 0.00 42.66 3.55
3773 7672 0.037790 GAGGGTGACTGAGCAGTGTC 60.038 60.000 8.03 1.00 42.66 3.67
3774 7673 1.373497 GGGTGACTGAGCAGTGTCG 60.373 63.158 8.03 0.00 42.66 4.35
3775 7674 1.364171 GGTGACTGAGCAGTGTCGT 59.636 57.895 8.03 0.00 42.66 4.34
3776 7675 0.596577 GGTGACTGAGCAGTGTCGTA 59.403 55.000 8.03 0.00 42.66 3.43
3777 7676 1.666311 GGTGACTGAGCAGTGTCGTAC 60.666 57.143 8.03 0.07 42.66 3.67
3778 7677 1.001706 GTGACTGAGCAGTGTCGTACA 60.002 52.381 8.03 0.00 42.66 2.90
3779 7678 1.679153 TGACTGAGCAGTGTCGTACAA 59.321 47.619 8.03 0.00 42.66 2.41
3780 7679 2.287608 TGACTGAGCAGTGTCGTACAAG 60.288 50.000 8.03 0.00 42.66 3.16
3781 7680 1.954382 ACTGAGCAGTGTCGTACAAGA 59.046 47.619 1.71 0.00 40.75 3.02
3782 7681 2.361119 ACTGAGCAGTGTCGTACAAGAA 59.639 45.455 1.71 0.00 40.75 2.52
3783 7682 3.005897 ACTGAGCAGTGTCGTACAAGAAT 59.994 43.478 1.71 0.00 40.75 2.40
3784 7683 3.990092 TGAGCAGTGTCGTACAAGAATT 58.010 40.909 0.00 0.00 0.00 2.17
3785 7684 3.987868 TGAGCAGTGTCGTACAAGAATTC 59.012 43.478 0.00 0.00 0.00 2.17
3786 7685 3.987868 GAGCAGTGTCGTACAAGAATTCA 59.012 43.478 8.44 0.00 0.00 2.57
3787 7686 4.569943 AGCAGTGTCGTACAAGAATTCAT 58.430 39.130 8.44 0.00 0.00 2.57
3788 7687 4.627467 AGCAGTGTCGTACAAGAATTCATC 59.373 41.667 8.44 0.00 0.00 2.92
3789 7688 4.490959 GCAGTGTCGTACAAGAATTCATCG 60.491 45.833 8.44 5.05 0.00 3.84
3790 7689 4.621460 CAGTGTCGTACAAGAATTCATCGT 59.379 41.667 8.44 4.07 0.00 3.73
3791 7690 5.798434 CAGTGTCGTACAAGAATTCATCGTA 59.202 40.000 8.44 3.09 0.00 3.43
3792 7691 5.798934 AGTGTCGTACAAGAATTCATCGTAC 59.201 40.000 8.44 13.48 0.00 3.67
3794 7693 4.085721 CGTACAAGAATTCATCGTACGC 57.914 45.455 26.78 9.08 45.82 4.42
3795 7694 3.789756 CGTACAAGAATTCATCGTACGCT 59.210 43.478 26.78 0.00 45.82 5.07
3796 7695 4.965762 CGTACAAGAATTCATCGTACGCTA 59.034 41.667 26.78 0.00 45.82 4.26
3797 7696 5.113678 CGTACAAGAATTCATCGTACGCTAG 59.886 44.000 26.78 12.22 45.82 3.42
3798 7697 3.797256 ACAAGAATTCATCGTACGCTAGC 59.203 43.478 11.24 4.06 0.00 3.42
3799 7698 3.710326 AGAATTCATCGTACGCTAGCA 57.290 42.857 16.45 0.00 0.00 3.49
3800 7699 3.372954 AGAATTCATCGTACGCTAGCAC 58.627 45.455 16.45 5.26 0.00 4.40
3801 7700 3.066900 AGAATTCATCGTACGCTAGCACT 59.933 43.478 16.45 0.88 0.00 4.40
3802 7701 2.188837 TTCATCGTACGCTAGCACTG 57.811 50.000 16.45 0.46 0.00 3.66
3803 7702 0.248498 TCATCGTACGCTAGCACTGC 60.248 55.000 16.45 1.35 0.00 4.40
3804 7703 0.248661 CATCGTACGCTAGCACTGCT 60.249 55.000 16.45 8.95 43.41 4.24
3805 7704 0.029567 ATCGTACGCTAGCACTGCTC 59.970 55.000 16.45 0.00 40.44 4.26
3806 7705 1.025113 TCGTACGCTAGCACTGCTCT 61.025 55.000 16.45 0.00 40.44 4.09
3807 7706 0.179161 CGTACGCTAGCACTGCTCTT 60.179 55.000 16.45 0.00 40.44 2.85
3808 7707 1.732732 CGTACGCTAGCACTGCTCTTT 60.733 52.381 16.45 0.00 40.44 2.52
3809 7708 1.921230 GTACGCTAGCACTGCTCTTTC 59.079 52.381 16.45 0.00 40.44 2.62
3810 7709 0.318441 ACGCTAGCACTGCTCTTTCA 59.682 50.000 16.45 0.00 40.44 2.69
3811 7710 1.066573 ACGCTAGCACTGCTCTTTCAT 60.067 47.619 16.45 0.00 40.44 2.57
3812 7711 2.166459 ACGCTAGCACTGCTCTTTCATA 59.834 45.455 16.45 0.00 40.44 2.15
3813 7712 3.181471 ACGCTAGCACTGCTCTTTCATAT 60.181 43.478 16.45 0.00 40.44 1.78
3814 7713 4.038042 ACGCTAGCACTGCTCTTTCATATA 59.962 41.667 16.45 0.00 40.44 0.86
3815 7714 4.984785 CGCTAGCACTGCTCTTTCATATAA 59.015 41.667 16.45 0.00 40.44 0.98
3816 7715 5.463392 CGCTAGCACTGCTCTTTCATATAAA 59.537 40.000 16.45 0.00 40.44 1.40
3817 7716 6.018751 CGCTAGCACTGCTCTTTCATATAAAA 60.019 38.462 16.45 0.00 40.44 1.52
3818 7717 7.128976 GCTAGCACTGCTCTTTCATATAAAAC 58.871 38.462 10.63 0.00 40.44 2.43
3819 7718 6.111768 AGCACTGCTCTTTCATATAAAACG 57.888 37.500 0.00 0.00 30.62 3.60
3820 7719 5.874810 AGCACTGCTCTTTCATATAAAACGA 59.125 36.000 0.00 0.00 30.62 3.85
3821 7720 5.960105 GCACTGCTCTTTCATATAAAACGAC 59.040 40.000 0.00 0.00 0.00 4.34
3822 7721 6.402118 GCACTGCTCTTTCATATAAAACGACA 60.402 38.462 0.00 0.00 0.00 4.35
3823 7722 7.176075 CACTGCTCTTTCATATAAAACGACAG 58.824 38.462 0.00 0.00 0.00 3.51
3824 7723 7.063426 CACTGCTCTTTCATATAAAACGACAGA 59.937 37.037 0.00 0.00 0.00 3.41
3825 7724 7.602644 ACTGCTCTTTCATATAAAACGACAGAA 59.397 33.333 0.00 0.00 0.00 3.02
3826 7725 8.317891 TGCTCTTTCATATAAAACGACAGAAA 57.682 30.769 0.00 0.00 0.00 2.52
3827 7726 8.946085 TGCTCTTTCATATAAAACGACAGAAAT 58.054 29.630 0.00 0.00 0.00 2.17
3863 7762 8.939201 ACTATAACTTCACTCAACTGATCATG 57.061 34.615 0.00 0.00 0.00 3.07
3864 7763 8.535335 ACTATAACTTCACTCAACTGATCATGT 58.465 33.333 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.895100 GATTCTGGGCAGCACAACCA 60.895 55.000 0.00 0.00 0.00 3.67
1 2 0.895100 TGATTCTGGGCAGCACAACC 60.895 55.000 0.00 0.00 0.00 3.77
2 3 1.180029 ATGATTCTGGGCAGCACAAC 58.820 50.000 0.00 0.00 0.00 3.32
3 4 2.804986 TATGATTCTGGGCAGCACAA 57.195 45.000 0.00 0.00 0.00 3.33
4 5 2.804986 TTATGATTCTGGGCAGCACA 57.195 45.000 0.00 0.00 0.00 4.57
5 6 4.158394 TCTTTTTATGATTCTGGGCAGCAC 59.842 41.667 0.00 0.00 0.00 4.40
6 7 4.158394 GTCTTTTTATGATTCTGGGCAGCA 59.842 41.667 0.00 0.00 0.00 4.41
7 8 4.400567 AGTCTTTTTATGATTCTGGGCAGC 59.599 41.667 0.00 0.00 0.00 5.25
8 9 7.630242 TTAGTCTTTTTATGATTCTGGGCAG 57.370 36.000 0.00 0.00 0.00 4.85
9 10 9.866655 ATATTAGTCTTTTTATGATTCTGGGCA 57.133 29.630 0.00 0.00 0.00 5.36
22 23 8.953313 CCCGTGTTCCTAAATATTAGTCTTTTT 58.047 33.333 0.00 0.00 0.00 1.94
23 24 8.105197 ACCCGTGTTCCTAAATATTAGTCTTTT 58.895 33.333 0.00 0.00 0.00 2.27
24 25 7.627311 ACCCGTGTTCCTAAATATTAGTCTTT 58.373 34.615 0.00 0.00 0.00 2.52
25 26 7.191593 ACCCGTGTTCCTAAATATTAGTCTT 57.808 36.000 0.00 0.00 0.00 3.01
26 27 6.803366 ACCCGTGTTCCTAAATATTAGTCT 57.197 37.500 0.00 0.00 0.00 3.24
27 28 7.720442 ACTACCCGTGTTCCTAAATATTAGTC 58.280 38.462 0.00 0.00 0.00 2.59
28 29 7.666063 ACTACCCGTGTTCCTAAATATTAGT 57.334 36.000 0.00 0.00 0.00 2.24
29 30 7.811713 GCTACTACCCGTGTTCCTAAATATTAG 59.188 40.741 0.00 0.00 0.00 1.73
30 31 7.506938 AGCTACTACCCGTGTTCCTAAATATTA 59.493 37.037 0.00 0.00 0.00 0.98
31 32 6.325804 AGCTACTACCCGTGTTCCTAAATATT 59.674 38.462 0.00 0.00 0.00 1.28
32 33 5.837438 AGCTACTACCCGTGTTCCTAAATAT 59.163 40.000 0.00 0.00 0.00 1.28
33 34 5.203528 AGCTACTACCCGTGTTCCTAAATA 58.796 41.667 0.00 0.00 0.00 1.40
34 35 4.028825 AGCTACTACCCGTGTTCCTAAAT 58.971 43.478 0.00 0.00 0.00 1.40
35 36 3.434309 AGCTACTACCCGTGTTCCTAAA 58.566 45.455 0.00 0.00 0.00 1.85
36 37 3.091633 AGCTACTACCCGTGTTCCTAA 57.908 47.619 0.00 0.00 0.00 2.69
37 38 2.814805 AGCTACTACCCGTGTTCCTA 57.185 50.000 0.00 0.00 0.00 2.94
38 39 2.814805 TAGCTACTACCCGTGTTCCT 57.185 50.000 0.00 0.00 0.00 3.36
39 40 5.718724 ATATTAGCTACTACCCGTGTTCC 57.281 43.478 0.00 0.00 0.00 3.62
40 41 9.702494 AAAATATATTAGCTACTACCCGTGTTC 57.298 33.333 0.00 0.00 0.00 3.18
64 65 9.921637 GTTGGTCTTAATGTATTCCATGAAAAA 57.078 29.630 0.00 0.00 32.82 1.94
65 66 9.083422 TGTTGGTCTTAATGTATTCCATGAAAA 57.917 29.630 0.00 0.00 32.82 2.29
66 67 8.519526 GTGTTGGTCTTAATGTATTCCATGAAA 58.480 33.333 0.00 0.00 32.82 2.69
67 68 7.667635 TGTGTTGGTCTTAATGTATTCCATGAA 59.332 33.333 0.00 0.00 32.82 2.57
68 69 7.171653 TGTGTTGGTCTTAATGTATTCCATGA 58.828 34.615 0.00 0.00 32.82 3.07
69 70 7.389803 TGTGTTGGTCTTAATGTATTCCATG 57.610 36.000 0.00 0.00 32.82 3.66
70 71 8.593945 ATTGTGTTGGTCTTAATGTATTCCAT 57.406 30.769 0.00 0.00 34.36 3.41
71 72 8.415950 AATTGTGTTGGTCTTAATGTATTCCA 57.584 30.769 0.00 0.00 0.00 3.53
72 73 9.705290 AAAATTGTGTTGGTCTTAATGTATTCC 57.295 29.630 0.00 0.00 0.00 3.01
97 98 1.036707 CGCCTTTCCACCTCCAAAAA 58.963 50.000 0.00 0.00 0.00 1.94
98 99 0.106419 ACGCCTTTCCACCTCCAAAA 60.106 50.000 0.00 0.00 0.00 2.44
99 100 0.821711 CACGCCTTTCCACCTCCAAA 60.822 55.000 0.00 0.00 0.00 3.28
100 101 1.228124 CACGCCTTTCCACCTCCAA 60.228 57.895 0.00 0.00 0.00 3.53
101 102 1.990160 AACACGCCTTTCCACCTCCA 61.990 55.000 0.00 0.00 0.00 3.86
102 103 1.228154 AACACGCCTTTCCACCTCC 60.228 57.895 0.00 0.00 0.00 4.30
103 104 0.534203 TGAACACGCCTTTCCACCTC 60.534 55.000 0.00 0.00 0.00 3.85
104 105 0.535102 CTGAACACGCCTTTCCACCT 60.535 55.000 0.00 0.00 0.00 4.00
105 106 0.534203 TCTGAACACGCCTTTCCACC 60.534 55.000 0.00 0.00 0.00 4.61
106 107 0.586802 GTCTGAACACGCCTTTCCAC 59.413 55.000 0.00 0.00 0.00 4.02
107 108 0.534203 GGTCTGAACACGCCTTTCCA 60.534 55.000 0.00 0.00 0.00 3.53
108 109 1.235281 GGGTCTGAACACGCCTTTCC 61.235 60.000 0.00 0.00 0.00 3.13
109 110 1.235281 GGGGTCTGAACACGCCTTTC 61.235 60.000 0.00 0.00 44.29 2.62
110 111 1.228154 GGGGTCTGAACACGCCTTT 60.228 57.895 0.00 0.00 44.29 3.11
111 112 2.430367 GGGGTCTGAACACGCCTT 59.570 61.111 0.00 0.00 44.29 4.35
112 113 3.637273 GGGGGTCTGAACACGCCT 61.637 66.667 6.64 0.00 46.37 5.52
128 129 2.751436 CAGTGTTCGGCATGGGGG 60.751 66.667 0.00 0.00 0.00 5.40
129 130 3.443045 GCAGTGTTCGGCATGGGG 61.443 66.667 0.00 0.00 35.02 4.96
130 131 3.443045 GGCAGTGTTCGGCATGGG 61.443 66.667 0.00 0.00 36.53 4.00
131 132 3.443045 GGGCAGTGTTCGGCATGG 61.443 66.667 0.00 0.00 36.53 3.66
132 133 3.443045 GGGGCAGTGTTCGGCATG 61.443 66.667 0.00 0.00 36.53 4.06
133 134 3.628646 GAGGGGCAGTGTTCGGCAT 62.629 63.158 0.00 0.00 36.53 4.40
134 135 4.329545 GAGGGGCAGTGTTCGGCA 62.330 66.667 0.00 0.00 36.53 5.69
136 137 4.760047 CGGAGGGGCAGTGTTCGG 62.760 72.222 0.00 0.00 0.00 4.30
149 150 1.472662 ATACATTCCCCTCGGCGGAG 61.473 60.000 14.06 14.06 40.14 4.63
150 151 1.458777 ATACATTCCCCTCGGCGGA 60.459 57.895 7.21 0.00 33.16 5.54
151 152 1.004918 GATACATTCCCCTCGGCGG 60.005 63.158 7.21 0.00 0.00 6.13
152 153 0.038159 GAGATACATTCCCCTCGGCG 60.038 60.000 0.00 0.00 0.00 6.46
153 154 1.048601 TGAGATACATTCCCCTCGGC 58.951 55.000 0.00 0.00 0.00 5.54
154 155 1.344763 GGTGAGATACATTCCCCTCGG 59.655 57.143 0.00 0.00 0.00 4.63
155 156 1.344763 GGGTGAGATACATTCCCCTCG 59.655 57.143 0.00 0.00 31.05 4.63
156 157 2.104963 GTGGGTGAGATACATTCCCCTC 59.895 54.545 0.00 0.00 34.89 4.30
162 163 2.919602 ACAAGGGTGGGTGAGATACATT 59.080 45.455 0.00 0.00 0.00 2.71
198 199 3.560636 AATTGTGCTAAGCTATCCGGT 57.439 42.857 0.00 0.00 0.00 5.28
199 200 5.297547 TCTAAATTGTGCTAAGCTATCCGG 58.702 41.667 0.00 0.00 0.00 5.14
241 242 6.201615 ACATTGATGTTATGTCGATGTGCTAG 59.798 38.462 7.91 0.00 44.86 3.42
250 251 7.003939 ACACACATACATTGATGTTATGTCG 57.996 36.000 1.46 6.55 41.97 4.35
327 328 7.972277 AGAGCATTATCACATTGATGTCAAAAC 59.028 33.333 0.00 0.00 39.39 2.43
328 329 8.058667 AGAGCATTATCACATTGATGTCAAAA 57.941 30.769 0.00 0.00 39.39 2.44
387 388 9.965748 AACAAAAATAACAAATTTTCGACACAG 57.034 25.926 0.00 0.00 31.53 3.66
388 389 9.959775 GAACAAAAATAACAAATTTTCGACACA 57.040 25.926 0.00 0.00 31.53 3.72
395 396 8.955388 AGCACAGGAACAAAAATAACAAATTTT 58.045 25.926 0.00 0.00 33.12 1.82
396 397 8.397148 CAGCACAGGAACAAAAATAACAAATTT 58.603 29.630 0.00 0.00 0.00 1.82
493 495 6.747280 CCGTAGCACATTTCAAAATTCTAAGG 59.253 38.462 0.00 0.00 0.00 2.69
494 496 6.747280 CCCGTAGCACATTTCAAAATTCTAAG 59.253 38.462 0.00 0.00 0.00 2.18
505 507 3.071479 TCAAACTCCCGTAGCACATTTC 58.929 45.455 0.00 0.00 0.00 2.17
523 535 3.663025 TGCAGTTTCATCGACTCATCAA 58.337 40.909 0.00 0.00 0.00 2.57
532 770 6.636447 TGTAATTTCACTTTGCAGTTTCATCG 59.364 34.615 0.00 0.00 0.00 3.84
536 774 6.039616 TGGTGTAATTTCACTTTGCAGTTTC 58.960 36.000 13.97 0.00 38.28 2.78
560 852 0.676466 TTCATTTCGCGGTGGCAGAT 60.676 50.000 6.13 0.00 39.92 2.90
638 930 1.331399 GGAGGAGAACGGGAGGAAGG 61.331 65.000 0.00 0.00 0.00 3.46
721 1013 1.831389 CGGGTAAGCGATGCGAATGG 61.831 60.000 0.00 0.00 0.00 3.16
727 1019 1.017177 TGTTCACGGGTAAGCGATGC 61.017 55.000 0.00 0.00 0.00 3.91
845 1137 1.153628 CGGCGGATTCTTCCTTCGT 60.154 57.895 0.00 0.00 40.17 3.85
917 1209 2.558359 CTGGCCAAAAACTAAGGTCCAG 59.442 50.000 7.01 0.00 38.99 3.86
918 1210 2.593026 CTGGCCAAAAACTAAGGTCCA 58.407 47.619 7.01 0.00 0.00 4.02
972 1264 1.369091 ATCGAATCACCTGCAACCGC 61.369 55.000 0.00 0.00 39.24 5.68
1245 2880 9.352784 GTCGAGAAATATTATCCTCTCAGATTG 57.647 37.037 12.96 0.50 35.12 2.67
1260 2899 3.243771 CCAAGCTACCGGTCGAGAAATAT 60.244 47.826 12.40 0.00 0.00 1.28
1262 2901 1.134788 CCAAGCTACCGGTCGAGAAAT 60.135 52.381 12.40 0.00 0.00 2.17
1271 2914 3.242739 CGAATTTGATTCCAAGCTACCGG 60.243 47.826 0.00 0.00 35.89 5.28
1305 2949 3.189287 GCAATATGTTAATGAGCTCCGGG 59.811 47.826 12.15 0.00 0.00 5.73
1306 2950 4.067896 AGCAATATGTTAATGAGCTCCGG 58.932 43.478 12.15 0.00 0.00 5.14
1308 2952 5.009410 AGCAAGCAATATGTTAATGAGCTCC 59.991 40.000 12.15 0.00 0.00 4.70
1309 2953 6.069684 AGCAAGCAATATGTTAATGAGCTC 57.930 37.500 6.82 6.82 0.00 4.09
1311 2955 5.051240 GCAAGCAAGCAATATGTTAATGAGC 60.051 40.000 0.00 0.00 0.00 4.26
1312 2956 6.198403 CAGCAAGCAAGCAATATGTTAATGAG 59.802 38.462 3.19 0.00 36.85 2.90
1313 2957 6.037726 CAGCAAGCAAGCAATATGTTAATGA 58.962 36.000 3.19 0.00 36.85 2.57
1314 2958 5.233476 CCAGCAAGCAAGCAATATGTTAATG 59.767 40.000 3.19 0.00 36.85 1.90
1315 2959 5.105228 ACCAGCAAGCAAGCAATATGTTAAT 60.105 36.000 3.19 0.00 36.85 1.40
1316 2960 4.220382 ACCAGCAAGCAAGCAATATGTTAA 59.780 37.500 3.19 0.00 36.85 2.01
1317 2961 3.763360 ACCAGCAAGCAAGCAATATGTTA 59.237 39.130 3.19 0.00 36.85 2.41
1318 2962 2.564062 ACCAGCAAGCAAGCAATATGTT 59.436 40.909 3.19 0.00 36.85 2.71
1319 2963 2.173519 ACCAGCAAGCAAGCAATATGT 58.826 42.857 3.19 0.00 36.85 2.29
1320 2964 2.953466 ACCAGCAAGCAAGCAATATG 57.047 45.000 3.19 0.00 36.85 1.78
1321 2965 2.827322 TGAACCAGCAAGCAAGCAATAT 59.173 40.909 3.19 0.00 36.85 1.28
1322 2966 2.229543 CTGAACCAGCAAGCAAGCAATA 59.770 45.455 3.19 0.00 36.85 1.90
1323 2967 1.000506 CTGAACCAGCAAGCAAGCAAT 59.999 47.619 3.19 0.00 36.85 3.56
1324 2968 0.386476 CTGAACCAGCAAGCAAGCAA 59.614 50.000 3.19 0.00 36.85 3.91
1325 2969 0.466007 TCTGAACCAGCAAGCAAGCA 60.466 50.000 3.19 0.00 36.85 3.91
1326 2970 0.886563 ATCTGAACCAGCAAGCAAGC 59.113 50.000 0.00 0.00 0.00 4.01
1327 2971 3.655276 AAATCTGAACCAGCAAGCAAG 57.345 42.857 0.00 0.00 0.00 4.01
1328 2972 4.216257 GTCTAAATCTGAACCAGCAAGCAA 59.784 41.667 0.00 0.00 0.00 3.91
1329 2973 3.753272 GTCTAAATCTGAACCAGCAAGCA 59.247 43.478 0.00 0.00 0.00 3.91
1330 2974 3.127721 GGTCTAAATCTGAACCAGCAAGC 59.872 47.826 0.00 0.00 0.00 4.01
1331 2975 4.583871 AGGTCTAAATCTGAACCAGCAAG 58.416 43.478 0.00 0.00 0.00 4.01
1332 2976 4.640771 AGGTCTAAATCTGAACCAGCAA 57.359 40.909 0.00 0.00 0.00 3.91
1333 2977 4.041567 TCAAGGTCTAAATCTGAACCAGCA 59.958 41.667 0.00 0.00 0.00 4.41
1334 2978 4.579869 TCAAGGTCTAAATCTGAACCAGC 58.420 43.478 0.00 0.00 0.00 4.85
1335 2979 5.065731 GCATCAAGGTCTAAATCTGAACCAG 59.934 44.000 0.00 0.00 0.00 4.00
1336 2980 4.943705 GCATCAAGGTCTAAATCTGAACCA 59.056 41.667 0.00 0.00 0.00 3.67
1337 2981 4.034510 CGCATCAAGGTCTAAATCTGAACC 59.965 45.833 0.00 0.00 0.00 3.62
1338 2982 4.631813 ACGCATCAAGGTCTAAATCTGAAC 59.368 41.667 0.00 0.00 0.00 3.18
1339 2983 4.832248 ACGCATCAAGGTCTAAATCTGAA 58.168 39.130 0.00 0.00 0.00 3.02
1340 2984 4.471904 ACGCATCAAGGTCTAAATCTGA 57.528 40.909 0.00 0.00 0.00 3.27
1341 2985 4.631377 TGAACGCATCAAGGTCTAAATCTG 59.369 41.667 0.00 0.00 34.30 2.90
1342 2986 4.832248 TGAACGCATCAAGGTCTAAATCT 58.168 39.130 0.00 0.00 34.30 2.40
1343 2987 5.545658 TTGAACGCATCAAGGTCTAAATC 57.454 39.130 0.45 0.00 43.08 2.17
1355 2999 3.550275 TGTAGAATACGCTTGAACGCATC 59.450 43.478 0.00 0.00 46.99 3.91
1356 3000 3.517602 TGTAGAATACGCTTGAACGCAT 58.482 40.909 0.00 0.00 46.99 4.73
1395 3066 7.170393 TGTATAGAGTAACACTTGTGCAGAT 57.830 36.000 0.10 0.00 0.00 2.90
1397 3068 6.813649 ACATGTATAGAGTAACACTTGTGCAG 59.186 38.462 0.00 0.00 30.72 4.41
1434 3105 3.624410 ACCGGTTAGTGTGTGTTTCTTTC 59.376 43.478 0.00 0.00 0.00 2.62
1437 3108 2.940410 CAACCGGTTAGTGTGTGTTTCT 59.060 45.455 21.79 0.00 0.00 2.52
1443 3114 3.118519 ACTTTCTCAACCGGTTAGTGTGT 60.119 43.478 21.79 11.87 0.00 3.72
1471 3289 6.682746 TCGAAGCAAGAATATAGACATCTCC 58.317 40.000 0.00 0.00 0.00 3.71
1488 3310 6.978659 AGTATATTTTTCTCACGATCGAAGCA 59.021 34.615 24.34 6.32 0.00 3.91
1513 3335 6.663523 TGATAGGCCAATAGTTCGATGAGATA 59.336 38.462 5.01 0.00 0.00 1.98
1573 3401 6.322491 GCTGAAATAACATGGGTTCTGTAAC 58.678 40.000 0.00 0.00 38.45 2.50
1585 3413 7.530426 AAGAAAGACTTGGCTGAAATAACAT 57.470 32.000 0.00 0.00 37.45 2.71
1590 3418 6.012745 ACCATAAGAAAGACTTGGCTGAAAT 58.987 36.000 0.00 0.00 39.38 2.17
1591 3419 5.385198 ACCATAAGAAAGACTTGGCTGAAA 58.615 37.500 0.00 0.00 39.38 2.69
1593 3421 4.041567 TGACCATAAGAAAGACTTGGCTGA 59.958 41.667 0.00 0.00 39.38 4.26
1594 3422 4.326826 TGACCATAAGAAAGACTTGGCTG 58.673 43.478 0.00 0.00 39.38 4.85
1595 3423 4.287067 TCTGACCATAAGAAAGACTTGGCT 59.713 41.667 0.00 0.00 39.38 4.75
1596 3424 4.393371 GTCTGACCATAAGAAAGACTTGGC 59.607 45.833 0.00 0.00 39.38 4.52
1599 3427 6.831976 ACTTGTCTGACCATAAGAAAGACTT 58.168 36.000 11.85 0.00 38.44 3.01
1600 3428 6.268847 AGACTTGTCTGACCATAAGAAAGACT 59.731 38.462 11.85 7.01 38.44 3.24
1664 4627 7.390027 AGCTAACACAATGAAATGTCTACTCT 58.610 34.615 0.00 0.00 0.00 3.24
1683 4649 7.380065 CCTATGTAAGAGTCATCGAAAGCTAAC 59.620 40.741 0.00 0.00 0.00 2.34
1755 5410 7.227049 ACAAAGGTTTATAACAGGTTCATGG 57.773 36.000 0.00 0.00 0.00 3.66
1872 5527 2.989166 GCTAATTTCAGCAACCAACTGC 59.011 45.455 0.00 0.00 41.40 4.40
1962 5617 4.942852 TGTAAGCAAAAACTGTTCCATGG 58.057 39.130 4.97 4.97 0.00 3.66
2045 5700 5.756347 AGTTGGCGCTCGATATAATTGTTTA 59.244 36.000 7.64 0.00 0.00 2.01
2067 5722 1.073284 ACAAAACCGCCCATGAGTAGT 59.927 47.619 0.00 0.00 0.00 2.73
2122 5777 4.675404 AGTAACAGACTGCACGCC 57.325 55.556 1.25 0.00 36.87 5.68
2147 5802 5.590259 ACATCAGCCTTAACACAATATGTCC 59.410 40.000 0.00 0.00 42.31 4.02
2152 5807 6.038161 GCATGTACATCAGCCTTAACACAATA 59.962 38.462 5.07 0.00 0.00 1.90
2325 5981 0.318441 CGGTCAAGAGGCTGTCTTCA 59.682 55.000 0.00 0.00 44.28 3.02
2349 6005 3.567478 AGCTGTGGTTTCTTCAAGTCT 57.433 42.857 0.00 0.00 0.00 3.24
2410 6066 7.014134 TGCCTGAATTAAACATCTTCACAAGAA 59.986 33.333 0.00 0.00 41.63 2.52
2436 6092 3.400928 CTGCTCAGCCTCAGCCCT 61.401 66.667 0.00 0.00 41.25 5.19
2523 6270 7.409661 CGTTGCATGTCTACAAGCTTTAAATTG 60.410 37.037 11.15 0.92 40.79 2.32
2526 6273 5.448438 CGTTGCATGTCTACAAGCTTTAAA 58.552 37.500 11.15 0.00 40.79 1.52
2531 6279 0.798776 GCGTTGCATGTCTACAAGCT 59.201 50.000 11.15 0.00 40.79 3.74
2533 6281 1.135972 GTGGCGTTGCATGTCTACAAG 60.136 52.381 0.00 0.00 0.00 3.16
2544 6292 1.210155 GAATCACCAGTGGCGTTGC 59.790 57.895 9.78 0.00 0.00 4.17
2563 6312 4.408276 ACTTAGAGTCAGTTGGCTAGTGA 58.592 43.478 2.22 2.22 33.77 3.41
2581 6330 9.346005 TGTAAGATATAATCAGTCGGTGACTTA 57.654 33.333 0.00 0.00 41.37 2.24
2616 6388 4.229096 CCCACACTGAAATTGATGTTTCG 58.771 43.478 0.00 0.00 40.20 3.46
2622 6394 2.899256 CCCAACCCACACTGAAATTGAT 59.101 45.455 0.00 0.00 0.00 2.57
2731 6507 9.307121 CTTCGTGAATGAATCTAGTCAAGTTAT 57.693 33.333 0.00 0.00 0.00 1.89
2738 6514 5.231147 GCTGTCTTCGTGAATGAATCTAGTC 59.769 44.000 0.00 0.00 0.00 2.59
2744 6520 4.083110 CCAAAGCTGTCTTCGTGAATGAAT 60.083 41.667 0.00 0.00 0.00 2.57
2759 6563 1.281867 TCAGGTCATACCCCAAAGCTG 59.718 52.381 0.00 0.00 39.75 4.24
2784 6588 9.584008 AGGAGTCAGCATATAATTCATCAAAAT 57.416 29.630 0.00 0.00 0.00 1.82
2830 6637 3.199880 AGGAAGTTGTCAGACAAGGTG 57.800 47.619 16.68 0.00 39.00 4.00
2853 6660 0.033366 CCGCCATCATATGTCGACCA 59.967 55.000 14.12 0.58 0.00 4.02
2856 6663 1.541588 CTCTCCGCCATCATATGTCGA 59.458 52.381 1.90 0.00 0.00 4.20
2888 6697 2.422276 AACTGAACAAGCCATTTCGC 57.578 45.000 0.00 0.00 0.00 4.70
2889 6698 3.705604 ACAAACTGAACAAGCCATTTCG 58.294 40.909 0.00 0.00 0.00 3.46
2896 6705 2.851824 CGAACCAACAAACTGAACAAGC 59.148 45.455 0.00 0.00 0.00 4.01
2905 6716 5.488645 TCCTTTCTAACGAACCAACAAAC 57.511 39.130 0.00 0.00 0.00 2.93
2946 6761 0.038166 ACCACCATCGTCCATGCTTT 59.962 50.000 0.00 0.00 0.00 3.51
2994 6810 1.064685 GGCTAACACAAGCTACCCCAT 60.065 52.381 0.00 0.00 42.37 4.00
2997 6813 3.729966 GATAGGCTAACACAAGCTACCC 58.270 50.000 0.00 0.00 42.37 3.69
3005 6821 0.177141 GGGCACGATAGGCTAACACA 59.823 55.000 0.00 0.00 43.77 3.72
3016 6832 2.116983 AACTGACTGCAGGGCACGAT 62.117 55.000 19.93 0.00 46.60 3.73
3060 6876 3.500680 TCCCAAATAGAAAACGCACTCAC 59.499 43.478 0.00 0.00 0.00 3.51
3063 6879 2.482721 CGTCCCAAATAGAAAACGCACT 59.517 45.455 0.00 0.00 0.00 4.40
3069 6885 8.970020 TGTATAGTACTCGTCCCAAATAGAAAA 58.030 33.333 0.00 0.00 0.00 2.29
3073 6889 7.883217 ACATGTATAGTACTCGTCCCAAATAG 58.117 38.462 0.00 0.00 0.00 1.73
3086 6902 6.923508 TGCAGCATACTTGACATGTATAGTAC 59.076 38.462 17.25 9.24 0.00 2.73
3091 6907 5.824097 TCATTGCAGCATACTTGACATGTAT 59.176 36.000 0.00 7.92 0.00 2.29
3101 6917 2.910199 ACATCGTCATTGCAGCATACT 58.090 42.857 0.00 0.00 0.00 2.12
3102 6918 3.680642 AACATCGTCATTGCAGCATAC 57.319 42.857 0.00 0.00 0.00 2.39
3124 6940 6.400091 GCGTGTGCAAGATTACTAGTATATGC 60.400 42.308 16.55 16.55 42.15 3.14
3143 6959 8.230486 ACTTCTCTTTTAATAGAATTGCGTGTG 58.770 33.333 0.00 0.00 31.60 3.82
3147 6963 9.409949 CGTAACTTCTCTTTTAATAGAATTGCG 57.590 33.333 0.00 2.51 31.60 4.85
3189 7055 2.275134 TGAGGCATGAGCTTGACAAA 57.725 45.000 0.00 0.00 41.70 2.83
3194 7060 5.109662 CTCATATTTGAGGCATGAGCTTG 57.890 43.478 5.33 0.00 44.78 4.01
3206 7072 6.155049 TGGTGATCTCACTGACTCATATTTGA 59.845 38.462 9.98 0.00 45.73 2.69
3346 7212 3.243839 CCTTTTCCTCACAACCCACAATG 60.244 47.826 0.00 0.00 0.00 2.82
3351 7217 3.028130 GTTTCCTTTTCCTCACAACCCA 58.972 45.455 0.00 0.00 0.00 4.51
3352 7218 3.028130 TGTTTCCTTTTCCTCACAACCC 58.972 45.455 0.00 0.00 0.00 4.11
3354 7220 4.566759 GCTTTGTTTCCTTTTCCTCACAAC 59.433 41.667 0.00 0.00 0.00 3.32
3382 7248 4.154918 GCTGGTCCATTTCAAGTGACTAAG 59.845 45.833 0.00 0.00 0.00 2.18
3395 7261 0.257039 GATCCTGGTGCTGGTCCATT 59.743 55.000 0.00 0.00 34.26 3.16
3396 7262 0.915872 TGATCCTGGTGCTGGTCCAT 60.916 55.000 0.00 0.00 34.26 3.41
3399 7295 1.271597 ACTTTGATCCTGGTGCTGGTC 60.272 52.381 0.00 0.00 0.00 4.02
3413 7309 5.239306 CCTCTCAATAACACTTGCACTTTGA 59.761 40.000 0.00 0.00 0.00 2.69
3414 7310 5.455392 CCTCTCAATAACACTTGCACTTTG 58.545 41.667 0.00 0.00 0.00 2.77
3415 7311 4.022849 GCCTCTCAATAACACTTGCACTTT 60.023 41.667 0.00 0.00 0.00 2.66
3416 7312 3.503748 GCCTCTCAATAACACTTGCACTT 59.496 43.478 0.00 0.00 0.00 3.16
3418 7314 2.813754 TGCCTCTCAATAACACTTGCAC 59.186 45.455 0.00 0.00 0.00 4.57
3419 7315 2.813754 GTGCCTCTCAATAACACTTGCA 59.186 45.455 0.00 0.00 0.00 4.08
3426 7325 5.705905 ACACCTTTTAGTGCCTCTCAATAAC 59.294 40.000 0.00 0.00 41.67 1.89
3430 7329 3.857157 ACACCTTTTAGTGCCTCTCAA 57.143 42.857 0.00 0.00 41.67 3.02
3433 7332 3.477530 GACAACACCTTTTAGTGCCTCT 58.522 45.455 0.00 0.00 41.67 3.69
3452 7351 2.144482 TCGTTTCCTTCGAACTGGAC 57.856 50.000 5.67 0.00 34.36 4.02
3454 7353 2.610374 TGTTTCGTTTCCTTCGAACTGG 59.390 45.455 0.00 0.00 44.87 4.00
3460 7359 4.654015 TCTGTTTTGTTTCGTTTCCTTCG 58.346 39.130 0.00 0.00 0.00 3.79
3469 7368 7.216317 CAGTTAACTGAACTCTGTTTTGTTTCG 59.784 37.037 28.17 0.00 45.81 3.46
3534 7433 1.064505 CACTTTGGTATCATGGCGCTG 59.935 52.381 7.64 0.00 0.00 5.18
3537 7436 0.381801 GGCACTTTGGTATCATGGCG 59.618 55.000 0.00 0.00 0.00 5.69
3542 7441 0.331278 CCAGGGGCACTTTGGTATCA 59.669 55.000 0.00 0.00 0.00 2.15
3543 7442 0.623723 TCCAGGGGCACTTTGGTATC 59.376 55.000 9.40 0.00 33.65 2.24
3544 7443 0.625849 CTCCAGGGGCACTTTGGTAT 59.374 55.000 9.40 0.00 33.65 2.73
3545 7444 0.770557 ACTCCAGGGGCACTTTGGTA 60.771 55.000 9.40 0.00 33.65 3.25
3546 7445 1.655114 AACTCCAGGGGCACTTTGGT 61.655 55.000 9.40 0.00 33.65 3.67
3547 7446 1.153756 AACTCCAGGGGCACTTTGG 59.846 57.895 3.92 3.92 0.00 3.28
3548 7447 0.468029 ACAACTCCAGGGGCACTTTG 60.468 55.000 0.00 0.00 0.00 2.77
3549 7448 1.145571 TACAACTCCAGGGGCACTTT 58.854 50.000 0.00 0.00 0.00 2.66
3550 7449 1.282157 GATACAACTCCAGGGGCACTT 59.718 52.381 0.00 0.00 0.00 3.16
3551 7450 0.912486 GATACAACTCCAGGGGCACT 59.088 55.000 0.00 0.00 0.00 4.40
3552 7451 0.618458 TGATACAACTCCAGGGGCAC 59.382 55.000 0.00 0.00 0.00 5.01
3553 7452 1.595311 ATGATACAACTCCAGGGGCA 58.405 50.000 0.00 0.00 0.00 5.36
3554 7453 2.706190 AGTATGATACAACTCCAGGGGC 59.294 50.000 5.28 0.00 0.00 5.80
3555 7454 3.711704 ACAGTATGATACAACTCCAGGGG 59.288 47.826 5.28 0.00 39.69 4.79
3556 7455 6.672266 ATACAGTATGATACAACTCCAGGG 57.328 41.667 5.28 0.00 39.69 4.45
3557 7456 8.204160 TGAAATACAGTATGATACAACTCCAGG 58.796 37.037 5.28 0.00 39.69 4.45
3558 7457 9.035607 GTGAAATACAGTATGATACAACTCCAG 57.964 37.037 5.28 0.00 39.69 3.86
3559 7458 8.536175 TGTGAAATACAGTATGATACAACTCCA 58.464 33.333 5.28 0.00 39.69 3.86
3560 7459 8.942338 TGTGAAATACAGTATGATACAACTCC 57.058 34.615 5.28 0.00 39.69 3.85
3576 7475 9.821662 GGTGAAAAGTACTTGTATGTGAAATAC 57.178 33.333 9.34 0.00 0.00 1.89
3577 7476 9.787435 AGGTGAAAAGTACTTGTATGTGAAATA 57.213 29.630 9.34 0.00 0.00 1.40
3578 7477 8.567948 CAGGTGAAAAGTACTTGTATGTGAAAT 58.432 33.333 9.34 0.00 0.00 2.17
3579 7478 7.771361 TCAGGTGAAAAGTACTTGTATGTGAAA 59.229 33.333 9.34 0.00 0.00 2.69
3580 7479 7.276658 TCAGGTGAAAAGTACTTGTATGTGAA 58.723 34.615 9.34 0.00 0.00 3.18
3581 7480 6.822442 TCAGGTGAAAAGTACTTGTATGTGA 58.178 36.000 9.34 5.89 0.00 3.58
3582 7481 6.706270 ACTCAGGTGAAAAGTACTTGTATGTG 59.294 38.462 9.34 3.62 0.00 3.21
3583 7482 6.827727 ACTCAGGTGAAAAGTACTTGTATGT 58.172 36.000 9.34 0.00 0.00 2.29
3584 7483 7.730364 AACTCAGGTGAAAAGTACTTGTATG 57.270 36.000 9.34 1.56 0.00 2.39
3585 7484 8.747538 AAAACTCAGGTGAAAAGTACTTGTAT 57.252 30.769 9.34 0.00 0.00 2.29
3586 7485 8.455682 CAAAAACTCAGGTGAAAAGTACTTGTA 58.544 33.333 9.34 0.00 0.00 2.41
3587 7486 7.175990 TCAAAAACTCAGGTGAAAAGTACTTGT 59.824 33.333 9.34 2.64 0.00 3.16
3588 7487 7.535139 TCAAAAACTCAGGTGAAAAGTACTTG 58.465 34.615 9.34 0.00 0.00 3.16
3589 7488 7.148069 CCTCAAAAACTCAGGTGAAAAGTACTT 60.148 37.037 1.12 1.12 0.00 2.24
3590 7489 6.318900 CCTCAAAAACTCAGGTGAAAAGTACT 59.681 38.462 0.00 0.00 0.00 2.73
3591 7490 6.459710 CCCTCAAAAACTCAGGTGAAAAGTAC 60.460 42.308 0.00 0.00 0.00 2.73
3592 7491 5.592688 CCCTCAAAAACTCAGGTGAAAAGTA 59.407 40.000 0.00 0.00 0.00 2.24
3593 7492 4.402474 CCCTCAAAAACTCAGGTGAAAAGT 59.598 41.667 0.00 0.00 0.00 2.66
3594 7493 4.644685 TCCCTCAAAAACTCAGGTGAAAAG 59.355 41.667 0.00 0.00 0.00 2.27
3595 7494 4.401202 GTCCCTCAAAAACTCAGGTGAAAA 59.599 41.667 0.00 0.00 0.00 2.29
3596 7495 3.951680 GTCCCTCAAAAACTCAGGTGAAA 59.048 43.478 0.00 0.00 0.00 2.69
3597 7496 3.202151 AGTCCCTCAAAAACTCAGGTGAA 59.798 43.478 0.00 0.00 0.00 3.18
3598 7497 2.777692 AGTCCCTCAAAAACTCAGGTGA 59.222 45.455 0.00 0.00 0.00 4.02
3599 7498 2.880890 CAGTCCCTCAAAAACTCAGGTG 59.119 50.000 0.00 0.00 0.00 4.00
3600 7499 2.749800 GCAGTCCCTCAAAAACTCAGGT 60.750 50.000 0.00 0.00 0.00 4.00
3601 7500 1.882623 GCAGTCCCTCAAAAACTCAGG 59.117 52.381 0.00 0.00 0.00 3.86
3602 7501 1.882623 GGCAGTCCCTCAAAAACTCAG 59.117 52.381 0.00 0.00 0.00 3.35
3632 7531 5.183713 CCAAGACCAGTTGATTTGCTAATCA 59.816 40.000 17.88 17.88 46.38 2.57
3650 7549 8.345565 AGCAATTTCGTATATGAAATCCAAGAC 58.654 33.333 25.89 14.97 45.36 3.01
3654 7553 7.520453 GCAGAGCAATTTCGTATATGAAATCCA 60.520 37.037 25.89 6.36 45.36 3.41
3667 7566 4.808077 AGTCATATGCAGAGCAATTTCG 57.192 40.909 0.00 0.00 43.62 3.46
3668 7567 8.915871 TTTAAAGTCATATGCAGAGCAATTTC 57.084 30.769 0.00 0.00 43.62 2.17
3673 7572 8.925700 CGTATATTTAAAGTCATATGCAGAGCA 58.074 33.333 0.00 0.00 44.86 4.26
3674 7573 9.140286 TCGTATATTTAAAGTCATATGCAGAGC 57.860 33.333 0.00 0.00 0.00 4.09
3678 7577 9.936759 TGGATCGTATATTTAAAGTCATATGCA 57.063 29.630 0.00 0.00 0.00 3.96
3698 7597 1.094073 ACTAGGTCGGACGTGGATCG 61.094 60.000 18.97 0.00 46.00 3.69
3699 7598 0.381089 CACTAGGTCGGACGTGGATC 59.619 60.000 18.97 0.00 0.00 3.36
3700 7599 0.034767 TCACTAGGTCGGACGTGGAT 60.035 55.000 18.97 3.09 0.00 3.41
3701 7600 0.034767 ATCACTAGGTCGGACGTGGA 60.035 55.000 18.97 11.30 0.00 4.02
3702 7601 0.381089 GATCACTAGGTCGGACGTGG 59.619 60.000 13.23 12.52 0.00 4.94
3703 7602 0.381089 GGATCACTAGGTCGGACGTG 59.619 60.000 13.23 10.34 0.00 4.49
3704 7603 0.750911 GGGATCACTAGGTCGGACGT 60.751 60.000 8.53 8.53 0.00 4.34
3705 7604 0.750546 TGGGATCACTAGGTCGGACG 60.751 60.000 1.43 0.00 0.00 4.79
3706 7605 0.745468 GTGGGATCACTAGGTCGGAC 59.255 60.000 0.00 0.00 40.58 4.79
3707 7606 0.396695 GGTGGGATCACTAGGTCGGA 60.397 60.000 0.00 0.00 43.17 4.55
3708 7607 0.686441 TGGTGGGATCACTAGGTCGG 60.686 60.000 0.00 0.00 43.17 4.79
3709 7608 1.414158 ATGGTGGGATCACTAGGTCG 58.586 55.000 0.00 0.00 43.17 4.79
3710 7609 2.746472 GCAATGGTGGGATCACTAGGTC 60.746 54.545 0.00 0.00 43.17 3.85
3711 7610 1.212935 GCAATGGTGGGATCACTAGGT 59.787 52.381 0.00 0.00 43.17 3.08
3712 7611 1.477558 GGCAATGGTGGGATCACTAGG 60.478 57.143 0.00 0.00 43.17 3.02
3713 7612 1.212688 TGGCAATGGTGGGATCACTAG 59.787 52.381 0.00 0.00 43.17 2.57
3714 7613 1.294041 TGGCAATGGTGGGATCACTA 58.706 50.000 0.00 0.00 43.17 2.74
3715 7614 0.632835 ATGGCAATGGTGGGATCACT 59.367 50.000 0.00 0.00 43.17 3.41
3716 7615 1.137479 CAATGGCAATGGTGGGATCAC 59.863 52.381 0.00 0.00 42.91 3.06
3717 7616 1.006878 TCAATGGCAATGGTGGGATCA 59.993 47.619 2.15 0.00 0.00 2.92
3718 7617 1.779221 TCAATGGCAATGGTGGGATC 58.221 50.000 2.15 0.00 0.00 3.36
3719 7618 2.043992 CATCAATGGCAATGGTGGGAT 58.956 47.619 7.96 0.00 0.00 3.85
3720 7619 1.487300 CATCAATGGCAATGGTGGGA 58.513 50.000 7.96 0.00 0.00 4.37
3721 7620 0.179067 GCATCAATGGCAATGGTGGG 60.179 55.000 17.04 0.00 29.44 4.61
3722 7621 0.537653 TGCATCAATGGCAATGGTGG 59.462 50.000 17.04 1.85 38.54 4.61
3723 7622 1.478916 TCTGCATCAATGGCAATGGTG 59.521 47.619 11.48 11.48 41.39 4.17
3724 7623 1.754803 CTCTGCATCAATGGCAATGGT 59.245 47.619 2.15 0.00 41.39 3.55
3725 7624 2.028876 TCTCTGCATCAATGGCAATGG 58.971 47.619 2.15 0.00 41.39 3.16
3726 7625 4.322080 AATCTCTGCATCAATGGCAATG 57.678 40.909 0.00 0.00 41.39 2.82
3727 7626 4.404394 TCAAATCTCTGCATCAATGGCAAT 59.596 37.500 0.00 0.00 41.39 3.56
3728 7627 3.764972 TCAAATCTCTGCATCAATGGCAA 59.235 39.130 0.00 0.00 41.39 4.52
3729 7628 3.358118 TCAAATCTCTGCATCAATGGCA 58.642 40.909 0.00 0.00 39.32 4.92
3730 7629 4.037565 TGATCAAATCTCTGCATCAATGGC 59.962 41.667 0.00 0.00 0.00 4.40
3731 7630 5.531287 TCTGATCAAATCTCTGCATCAATGG 59.469 40.000 0.00 0.00 0.00 3.16
3732 7631 6.293680 CCTCTGATCAAATCTCTGCATCAATG 60.294 42.308 0.00 0.00 0.00 2.82
3733 7632 5.765677 CCTCTGATCAAATCTCTGCATCAAT 59.234 40.000 0.00 0.00 0.00 2.57
3734 7633 5.123936 CCTCTGATCAAATCTCTGCATCAA 58.876 41.667 0.00 0.00 0.00 2.57
3735 7634 4.444449 CCCTCTGATCAAATCTCTGCATCA 60.444 45.833 0.00 0.00 0.00 3.07
3736 7635 4.066490 CCCTCTGATCAAATCTCTGCATC 58.934 47.826 0.00 0.00 0.00 3.91
3737 7636 3.458857 ACCCTCTGATCAAATCTCTGCAT 59.541 43.478 0.00 0.00 0.00 3.96
3738 7637 2.842496 ACCCTCTGATCAAATCTCTGCA 59.158 45.455 0.00 0.00 0.00 4.41
3739 7638 3.118482 TCACCCTCTGATCAAATCTCTGC 60.118 47.826 0.00 0.00 0.00 4.26
3740 7639 4.161942 AGTCACCCTCTGATCAAATCTCTG 59.838 45.833 0.00 0.00 0.00 3.35
3741 7640 4.161942 CAGTCACCCTCTGATCAAATCTCT 59.838 45.833 0.00 0.00 35.20 3.10
3742 7641 4.161189 TCAGTCACCCTCTGATCAAATCTC 59.839 45.833 0.00 0.00 37.07 2.75
3743 7642 4.099633 TCAGTCACCCTCTGATCAAATCT 58.900 43.478 0.00 0.00 37.07 2.40
3744 7643 4.440880 CTCAGTCACCCTCTGATCAAATC 58.559 47.826 0.00 0.00 40.46 2.17
3745 7644 3.370315 GCTCAGTCACCCTCTGATCAAAT 60.370 47.826 0.00 0.00 40.46 2.32
3746 7645 2.027745 GCTCAGTCACCCTCTGATCAAA 60.028 50.000 0.00 0.00 40.46 2.69
3747 7646 1.552337 GCTCAGTCACCCTCTGATCAA 59.448 52.381 0.00 0.00 40.46 2.57
3748 7647 1.189752 GCTCAGTCACCCTCTGATCA 58.810 55.000 0.00 0.00 40.46 2.92
3749 7648 1.136695 CTGCTCAGTCACCCTCTGATC 59.863 57.143 0.00 0.00 40.46 2.92
3750 7649 1.193323 CTGCTCAGTCACCCTCTGAT 58.807 55.000 0.00 0.00 40.46 2.90
3751 7650 0.178950 ACTGCTCAGTCACCCTCTGA 60.179 55.000 0.00 0.00 36.92 3.27
3752 7651 0.037512 CACTGCTCAGTCACCCTCTG 60.038 60.000 0.00 0.00 40.20 3.35
3753 7652 0.470833 ACACTGCTCAGTCACCCTCT 60.471 55.000 0.00 0.00 40.20 3.69
3754 7653 0.037790 GACACTGCTCAGTCACCCTC 60.038 60.000 0.00 0.00 40.20 4.30
3755 7654 1.810606 CGACACTGCTCAGTCACCCT 61.811 60.000 0.00 0.00 40.20 4.34
3756 7655 1.373497 CGACACTGCTCAGTCACCC 60.373 63.158 0.00 0.00 40.20 4.61
3757 7656 0.596577 TACGACACTGCTCAGTCACC 59.403 55.000 0.00 0.00 40.20 4.02
3758 7657 1.001706 TGTACGACACTGCTCAGTCAC 60.002 52.381 0.00 0.00 40.20 3.67
3759 7658 1.314730 TGTACGACACTGCTCAGTCA 58.685 50.000 0.00 0.00 40.20 3.41
3760 7659 2.031069 TCTTGTACGACACTGCTCAGTC 60.031 50.000 0.00 0.00 40.20 3.51
3761 7660 1.954382 TCTTGTACGACACTGCTCAGT 59.046 47.619 0.00 0.00 43.61 3.41
3762 7661 2.706555 TCTTGTACGACACTGCTCAG 57.293 50.000 0.00 0.00 0.00 3.35
3763 7662 3.660501 ATTCTTGTACGACACTGCTCA 57.339 42.857 0.00 0.00 0.00 4.26
3764 7663 3.987868 TGAATTCTTGTACGACACTGCTC 59.012 43.478 7.05 0.00 0.00 4.26
3765 7664 3.990092 TGAATTCTTGTACGACACTGCT 58.010 40.909 7.05 0.00 0.00 4.24
3766 7665 4.490959 CGATGAATTCTTGTACGACACTGC 60.491 45.833 7.05 0.00 0.00 4.40
3767 7666 4.621460 ACGATGAATTCTTGTACGACACTG 59.379 41.667 7.05 0.00 0.00 3.66
3768 7667 4.806330 ACGATGAATTCTTGTACGACACT 58.194 39.130 7.05 0.00 0.00 3.55
3769 7668 6.006072 GTACGATGAATTCTTGTACGACAC 57.994 41.667 7.05 5.85 0.00 3.67
3774 7673 5.108330 GCTAGCGTACGATGAATTCTTGTAC 60.108 44.000 21.65 17.82 33.74 2.90
3775 7674 4.974275 GCTAGCGTACGATGAATTCTTGTA 59.026 41.667 21.65 4.22 0.00 2.41
3776 7675 3.797256 GCTAGCGTACGATGAATTCTTGT 59.203 43.478 21.65 5.16 0.00 3.16
3777 7676 3.796717 TGCTAGCGTACGATGAATTCTTG 59.203 43.478 21.65 6.67 0.00 3.02
3778 7677 3.797256 GTGCTAGCGTACGATGAATTCTT 59.203 43.478 21.65 0.00 0.00 2.52
3779 7678 3.066900 AGTGCTAGCGTACGATGAATTCT 59.933 43.478 21.65 7.01 0.00 2.40
3780 7679 3.180584 CAGTGCTAGCGTACGATGAATTC 59.819 47.826 21.65 0.00 0.00 2.17
3781 7680 3.116300 CAGTGCTAGCGTACGATGAATT 58.884 45.455 21.65 0.00 0.00 2.17
3782 7681 2.732366 CAGTGCTAGCGTACGATGAAT 58.268 47.619 21.65 0.00 0.00 2.57
3783 7682 1.797713 GCAGTGCTAGCGTACGATGAA 60.798 52.381 21.65 0.00 0.00 2.57
3784 7683 0.248498 GCAGTGCTAGCGTACGATGA 60.248 55.000 21.65 1.38 0.00 2.92
3785 7684 0.248661 AGCAGTGCTAGCGTACGATG 60.249 55.000 21.65 9.01 36.99 3.84
3786 7685 0.029567 GAGCAGTGCTAGCGTACGAT 59.970 55.000 19.77 16.90 39.88 3.73
3787 7686 1.025113 AGAGCAGTGCTAGCGTACGA 61.025 55.000 19.77 0.00 39.88 3.43
3788 7687 0.179161 AAGAGCAGTGCTAGCGTACG 60.179 55.000 19.77 11.84 39.88 3.67
3789 7688 1.921230 GAAAGAGCAGTGCTAGCGTAC 59.079 52.381 19.77 4.15 39.88 3.67
3790 7689 1.544246 TGAAAGAGCAGTGCTAGCGTA 59.456 47.619 19.77 1.96 39.88 4.42
3791 7690 0.318441 TGAAAGAGCAGTGCTAGCGT 59.682 50.000 19.77 1.50 39.88 5.07
3792 7691 1.649664 ATGAAAGAGCAGTGCTAGCG 58.350 50.000 19.77 0.00 39.88 4.26
3793 7692 6.851222 TTTATATGAAAGAGCAGTGCTAGC 57.149 37.500 19.77 8.10 39.88 3.42
3794 7693 7.222805 TCGTTTTATATGAAAGAGCAGTGCTAG 59.777 37.037 19.77 0.00 39.88 3.42
3795 7694 7.010183 GTCGTTTTATATGAAAGAGCAGTGCTA 59.990 37.037 19.77 1.47 39.88 3.49
3796 7695 5.874810 TCGTTTTATATGAAAGAGCAGTGCT 59.125 36.000 19.86 19.86 43.88 4.40
3797 7696 5.960105 GTCGTTTTATATGAAAGAGCAGTGC 59.040 40.000 7.13 7.13 0.00 4.40
3798 7697 7.060600 TGTCGTTTTATATGAAAGAGCAGTG 57.939 36.000 0.00 0.00 0.00 3.66
3799 7698 7.097192 TCTGTCGTTTTATATGAAAGAGCAGT 58.903 34.615 12.77 0.00 32.25 4.40
3800 7699 7.525688 TCTGTCGTTTTATATGAAAGAGCAG 57.474 36.000 0.00 3.01 32.25 4.24
3801 7700 7.899178 TTCTGTCGTTTTATATGAAAGAGCA 57.101 32.000 0.00 0.00 37.42 4.26
3838 7737 8.535335 ACATGATCAGTTGAGTGAAGTTATAGT 58.465 33.333 0.00 0.00 0.00 2.12
3839 7738 8.939201 ACATGATCAGTTGAGTGAAGTTATAG 57.061 34.615 0.00 0.00 0.00 1.31


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.