Multiple sequence alignment - TraesCS5A01G261900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G261900 chr5A 100.000 3326 0 0 1 3326 475468907 475465582 0.000000e+00 6143.0
1 TraesCS5A01G261900 chr5A 100.000 29 0 0 3298 3326 458197287 458197259 2.000000e-03 54.7
2 TraesCS5A01G261900 chr5D 93.600 2297 93 34 748 3026 372110244 372107984 0.000000e+00 3378.0
3 TraesCS5A01G261900 chr5D 85.435 460 44 12 303 748 525315210 525315660 1.090000e-124 457.0
4 TraesCS5A01G261900 chr5D 84.368 467 48 20 303 749 346881910 346882371 5.100000e-118 435.0
5 TraesCS5A01G261900 chr5D 89.474 114 7 2 2635 2748 372108018 372107910 4.470000e-29 139.0
6 TraesCS5A01G261900 chr5D 95.556 45 0 2 149 191 372122709 372122665 1.660000e-08 71.3
7 TraesCS5A01G261900 chr5B 95.705 1979 56 15 773 2738 442414906 442412944 0.000000e+00 3157.0
8 TraesCS5A01G261900 chr5B 90.909 55 3 2 3242 3295 442412536 442412483 4.600000e-09 73.1
9 TraesCS5A01G261900 chr7A 85.652 460 46 11 303 747 647293440 647292986 1.810000e-127 466.0
10 TraesCS5A01G261900 chr7A 85.210 453 53 7 303 747 491992062 491992508 1.410000e-123 453.0
11 TraesCS5A01G261900 chr7A 94.737 38 1 1 3289 3326 692337066 692337030 1.290000e-04 58.4
12 TraesCS5A01G261900 chr3D 84.934 458 53 11 303 748 413622911 413623364 1.820000e-122 449.0
13 TraesCS5A01G261900 chr3D 90.625 64 5 1 2744 2806 577155061 577154998 2.130000e-12 84.2
14 TraesCS5A01G261900 chr2A 84.783 460 50 15 303 747 749965752 749966206 8.470000e-121 444.0
15 TraesCS5A01G261900 chrUn 84.989 453 48 12 302 747 91337423 91337862 3.050000e-120 442.0
16 TraesCS5A01G261900 chr1D 84.615 455 56 9 303 748 470919455 470919006 1.100000e-119 440.0
17 TraesCS5A01G261900 chr7D 84.222 469 55 14 303 756 434163216 434162752 3.940000e-119 438.0
18 TraesCS5A01G261900 chr4D 86.626 329 37 2 1613 1934 484775600 484775928 1.130000e-94 357.0
19 TraesCS5A01G261900 chr4D 100.000 29 0 0 3298 3326 150002071 150002099 2.000000e-03 54.7
20 TraesCS5A01G261900 chr4B 82.773 238 39 1 2004 2241 617856348 617856583 9.350000e-51 211.0
21 TraesCS5A01G261900 chr4B 98.077 52 1 0 2744 2795 135218159 135218210 1.270000e-14 91.6
22 TraesCS5A01G261900 chr4A 96.552 58 1 1 2745 2801 676876973 676877030 9.820000e-16 95.3
23 TraesCS5A01G261900 chr4A 100.000 29 0 0 3298 3326 466937336 466937364 2.000000e-03 54.7
24 TraesCS5A01G261900 chr4A 100.000 28 0 0 3299 3326 116143529 116143502 6.000000e-03 52.8
25 TraesCS5A01G261900 chr3B 98.077 52 1 0 2744 2795 431539138 431539189 1.270000e-14 91.6
26 TraesCS5A01G261900 chr2D 98.113 53 0 1 2744 2796 289157251 289157302 1.270000e-14 91.6
27 TraesCS5A01G261900 chr2B 98.077 52 1 0 2744 2795 442788159 442788210 1.270000e-14 91.6
28 TraesCS5A01G261900 chr2B 85.507 69 7 3 5 72 66183726 66183792 5.950000e-08 69.4
29 TraesCS5A01G261900 chr3A 94.737 57 3 0 2744 2800 365363828 365363772 4.570000e-14 89.8
30 TraesCS5A01G261900 chr6D 93.333 60 3 1 2744 2802 55924260 55924201 1.640000e-13 87.9
31 TraesCS5A01G261900 chr6B 88.406 69 6 2 2733 2800 253558482 253558415 7.650000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G261900 chr5A 475465582 475468907 3325 True 6143.00 6143 100.000 1 3326 1 chr5A.!!$R2 3325
1 TraesCS5A01G261900 chr5D 372107910 372110244 2334 True 1758.50 3378 91.537 748 3026 2 chr5D.!!$R2 2278
2 TraesCS5A01G261900 chr5B 442412483 442414906 2423 True 1615.05 3157 93.307 773 3295 2 chr5B.!!$R1 2522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
227 228 0.033504 TCCAGATTCTATTCGGCGCC 59.966 55.0 19.07 19.07 0.00 6.53 F
228 229 0.034059 CCAGATTCTATTCGGCGCCT 59.966 55.0 26.68 8.66 0.00 5.52 F
767 768 0.035458 ACAGCAGGTCTCCGAAAAGG 59.965 55.0 0.00 0.00 42.97 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1638 1651 0.035725 TGAAGAGGCTCCAGTGCATG 60.036 55.000 11.71 0.0 34.04 4.06 R
2070 2083 1.065491 TCCGCAAGCACACCAATATCT 60.065 47.619 0.00 0.0 0.00 1.98 R
2583 2597 0.610174 CAGGCTAGGCAGACAACAGA 59.390 55.000 19.70 0.0 28.86 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.541143 TCATTTTATTTTTCTTGGTTCCTTGAC 57.459 29.630 0.00 0.00 0.00 3.18
28 29 9.323985 CATTTTATTTTTCTTGGTTCCTTGACA 57.676 29.630 0.00 0.00 0.00 3.58
29 30 8.940768 TTTTATTTTTCTTGGTTCCTTGACAG 57.059 30.769 0.00 0.00 0.00 3.51
30 31 7.889873 TTATTTTTCTTGGTTCCTTGACAGA 57.110 32.000 0.00 0.00 0.00 3.41
31 32 5.576447 TTTTTCTTGGTTCCTTGACAGAC 57.424 39.130 0.00 0.00 0.00 3.51
32 33 3.924114 TTCTTGGTTCCTTGACAGACA 57.076 42.857 0.00 0.00 0.00 3.41
33 34 3.475566 TCTTGGTTCCTTGACAGACAG 57.524 47.619 0.00 0.00 0.00 3.51
34 35 2.771943 TCTTGGTTCCTTGACAGACAGT 59.228 45.455 0.00 0.00 0.00 3.55
35 36 3.199946 TCTTGGTTCCTTGACAGACAGTT 59.800 43.478 0.00 0.00 0.00 3.16
36 37 2.917933 TGGTTCCTTGACAGACAGTTG 58.082 47.619 0.00 0.00 0.00 3.16
37 38 2.503765 TGGTTCCTTGACAGACAGTTGA 59.496 45.455 0.00 0.00 0.00 3.18
38 39 3.136443 TGGTTCCTTGACAGACAGTTGAT 59.864 43.478 0.00 0.00 0.00 2.57
39 40 4.137543 GGTTCCTTGACAGACAGTTGATT 58.862 43.478 0.00 0.00 0.00 2.57
40 41 4.023707 GGTTCCTTGACAGACAGTTGATTG 60.024 45.833 0.00 0.00 0.00 2.67
41 42 4.422073 TCCTTGACAGACAGTTGATTGT 57.578 40.909 0.00 0.00 0.00 2.71
42 43 4.780815 TCCTTGACAGACAGTTGATTGTT 58.219 39.130 0.00 0.00 0.00 2.83
43 44 5.192927 TCCTTGACAGACAGTTGATTGTTT 58.807 37.500 0.00 0.00 0.00 2.83
44 45 5.652014 TCCTTGACAGACAGTTGATTGTTTT 59.348 36.000 0.00 0.00 0.00 2.43
45 46 5.973565 CCTTGACAGACAGTTGATTGTTTTC 59.026 40.000 0.00 0.00 0.00 2.29
46 47 6.183360 CCTTGACAGACAGTTGATTGTTTTCT 60.183 38.462 0.00 0.00 0.00 2.52
47 48 6.757897 TGACAGACAGTTGATTGTTTTCTT 57.242 33.333 0.00 0.00 0.00 2.52
48 49 6.554419 TGACAGACAGTTGATTGTTTTCTTG 58.446 36.000 0.00 0.00 0.00 3.02
49 50 6.374053 TGACAGACAGTTGATTGTTTTCTTGA 59.626 34.615 0.00 0.00 0.00 3.02
50 51 6.555315 ACAGACAGTTGATTGTTTTCTTGAC 58.445 36.000 0.00 0.00 0.00 3.18
51 52 5.973565 CAGACAGTTGATTGTTTTCTTGACC 59.026 40.000 0.00 0.00 0.00 4.02
52 53 5.067805 AGACAGTTGATTGTTTTCTTGACCC 59.932 40.000 0.00 0.00 0.00 4.46
53 54 4.202010 ACAGTTGATTGTTTTCTTGACCCG 60.202 41.667 0.00 0.00 0.00 5.28
54 55 3.951680 AGTTGATTGTTTTCTTGACCCGT 59.048 39.130 0.00 0.00 0.00 5.28
55 56 5.008217 CAGTTGATTGTTTTCTTGACCCGTA 59.992 40.000 0.00 0.00 0.00 4.02
56 57 5.591067 AGTTGATTGTTTTCTTGACCCGTAA 59.409 36.000 0.00 0.00 0.00 3.18
57 58 5.682943 TGATTGTTTTCTTGACCCGTAAG 57.317 39.130 0.00 0.00 0.00 2.34
58 59 5.127491 TGATTGTTTTCTTGACCCGTAAGT 58.873 37.500 0.00 0.00 0.00 2.24
59 60 5.591067 TGATTGTTTTCTTGACCCGTAAGTT 59.409 36.000 0.00 0.00 0.00 2.66
60 61 4.886247 TGTTTTCTTGACCCGTAAGTTG 57.114 40.909 0.00 0.00 0.00 3.16
61 62 4.515361 TGTTTTCTTGACCCGTAAGTTGA 58.485 39.130 0.00 0.00 0.00 3.18
62 63 4.942483 TGTTTTCTTGACCCGTAAGTTGAA 59.058 37.500 0.00 0.00 0.00 2.69
63 64 5.415077 TGTTTTCTTGACCCGTAAGTTGAAA 59.585 36.000 0.00 0.00 0.00 2.69
64 65 6.072064 TGTTTTCTTGACCCGTAAGTTGAAAA 60.072 34.615 0.00 0.00 32.21 2.29
65 66 6.512342 TTTCTTGACCCGTAAGTTGAAAAA 57.488 33.333 0.00 0.00 0.00 1.94
66 67 6.702716 TTCTTGACCCGTAAGTTGAAAAAT 57.297 33.333 0.00 0.00 0.00 1.82
67 68 6.308371 TCTTGACCCGTAAGTTGAAAAATC 57.692 37.500 0.00 0.00 0.00 2.17
68 69 5.823570 TCTTGACCCGTAAGTTGAAAAATCA 59.176 36.000 0.00 0.00 0.00 2.57
69 70 6.319152 TCTTGACCCGTAAGTTGAAAAATCAA 59.681 34.615 0.00 0.00 0.00 2.57
70 71 6.067263 TGACCCGTAAGTTGAAAAATCAAG 57.933 37.500 0.00 0.00 0.00 3.02
71 72 5.591067 TGACCCGTAAGTTGAAAAATCAAGT 59.409 36.000 0.00 0.00 35.01 3.16
72 73 6.068473 ACCCGTAAGTTGAAAAATCAAGTC 57.932 37.500 0.00 0.00 32.61 3.01
73 74 5.591067 ACCCGTAAGTTGAAAAATCAAGTCA 59.409 36.000 0.00 0.00 32.61 3.41
74 75 6.142817 CCCGTAAGTTGAAAAATCAAGTCAG 58.857 40.000 0.00 0.00 32.61 3.51
75 76 6.238648 CCCGTAAGTTGAAAAATCAAGTCAGT 60.239 38.462 0.00 0.00 32.61 3.41
76 77 7.193595 CCGTAAGTTGAAAAATCAAGTCAGTT 58.806 34.615 0.00 0.00 32.61 3.16
77 78 8.339714 CCGTAAGTTGAAAAATCAAGTCAGTTA 58.660 33.333 0.00 0.00 32.61 2.24
78 79 9.710979 CGTAAGTTGAAAAATCAAGTCAGTTAA 57.289 29.630 0.00 0.00 32.61 2.01
85 86 9.734620 TGAAAAATCAAGTCAGTTAAGATTGTG 57.265 29.630 0.00 0.00 0.00 3.33
86 87 9.950680 GAAAAATCAAGTCAGTTAAGATTGTGA 57.049 29.630 0.00 0.00 0.00 3.58
90 91 7.351414 TCAAGTCAGTTAAGATTGTGAATCG 57.649 36.000 0.00 0.00 42.75 3.34
91 92 6.929049 TCAAGTCAGTTAAGATTGTGAATCGT 59.071 34.615 0.00 0.00 42.75 3.73
92 93 8.085909 TCAAGTCAGTTAAGATTGTGAATCGTA 58.914 33.333 0.00 0.00 42.75 3.43
93 94 8.708742 CAAGTCAGTTAAGATTGTGAATCGTAA 58.291 33.333 0.00 0.00 42.75 3.18
102 103 7.953158 AGATTGTGAATCGTAACATGATAGG 57.047 36.000 0.00 0.00 42.75 2.57
103 104 6.931281 AGATTGTGAATCGTAACATGATAGGG 59.069 38.462 0.00 0.00 42.75 3.53
104 105 5.607939 TGTGAATCGTAACATGATAGGGT 57.392 39.130 0.00 0.00 0.00 4.34
105 106 5.984725 TGTGAATCGTAACATGATAGGGTT 58.015 37.500 0.00 0.00 0.00 4.11
106 107 6.046593 TGTGAATCGTAACATGATAGGGTTC 58.953 40.000 17.17 17.17 33.49 3.62
107 108 6.046593 GTGAATCGTAACATGATAGGGTTCA 58.953 40.000 20.81 20.81 38.04 3.18
108 109 6.018994 GTGAATCGTAACATGATAGGGTTCAC 60.019 42.308 29.69 29.69 46.10 3.18
109 110 5.607939 ATCGTAACATGATAGGGTTCACA 57.392 39.130 0.00 0.00 0.00 3.58
110 111 4.751060 TCGTAACATGATAGGGTTCACAC 58.249 43.478 0.00 0.00 0.00 3.82
111 112 4.221041 TCGTAACATGATAGGGTTCACACA 59.779 41.667 0.00 0.00 0.00 3.72
112 113 4.328983 CGTAACATGATAGGGTTCACACAC 59.671 45.833 0.00 0.00 0.00 3.82
113 114 4.365514 AACATGATAGGGTTCACACACA 57.634 40.909 0.00 0.00 0.00 3.72
114 115 3.674997 ACATGATAGGGTTCACACACAC 58.325 45.455 0.00 0.00 0.00 3.82
115 116 3.072330 ACATGATAGGGTTCACACACACA 59.928 43.478 0.00 0.00 0.00 3.72
116 117 3.120321 TGATAGGGTTCACACACACAC 57.880 47.619 0.00 0.00 0.00 3.82
117 118 2.436173 TGATAGGGTTCACACACACACA 59.564 45.455 0.00 0.00 0.00 3.72
118 119 2.319136 TAGGGTTCACACACACACAC 57.681 50.000 0.00 0.00 0.00 3.82
119 120 0.326595 AGGGTTCACACACACACACA 59.673 50.000 0.00 0.00 0.00 3.72
120 121 0.450184 GGGTTCACACACACACACAC 59.550 55.000 0.00 0.00 0.00 3.82
121 122 0.450184 GGTTCACACACACACACACC 59.550 55.000 0.00 0.00 0.00 4.16
122 123 0.450184 GTTCACACACACACACACCC 59.550 55.000 0.00 0.00 0.00 4.61
123 124 0.678366 TTCACACACACACACACCCC 60.678 55.000 0.00 0.00 0.00 4.95
124 125 1.377856 CACACACACACACACCCCA 60.378 57.895 0.00 0.00 0.00 4.96
125 126 0.962855 CACACACACACACACCCCAA 60.963 55.000 0.00 0.00 0.00 4.12
126 127 0.033601 ACACACACACACACCCCAAT 60.034 50.000 0.00 0.00 0.00 3.16
127 128 1.213182 ACACACACACACACCCCAATA 59.787 47.619 0.00 0.00 0.00 1.90
128 129 1.606668 CACACACACACACCCCAATAC 59.393 52.381 0.00 0.00 0.00 1.89
129 130 0.871722 CACACACACACCCCAATACG 59.128 55.000 0.00 0.00 0.00 3.06
130 131 0.759959 ACACACACACCCCAATACGA 59.240 50.000 0.00 0.00 0.00 3.43
131 132 1.270625 ACACACACACCCCAATACGAG 60.271 52.381 0.00 0.00 0.00 4.18
132 133 1.053424 ACACACACCCCAATACGAGT 58.947 50.000 0.00 0.00 0.00 4.18
133 134 1.418637 ACACACACCCCAATACGAGTT 59.581 47.619 0.00 0.00 0.00 3.01
134 135 2.633967 ACACACACCCCAATACGAGTTA 59.366 45.455 0.00 0.00 0.00 2.24
135 136 3.259064 CACACACCCCAATACGAGTTAG 58.741 50.000 0.00 0.00 0.00 2.34
136 137 2.235402 ACACACCCCAATACGAGTTAGG 59.765 50.000 0.00 0.00 0.00 2.69
137 138 1.835531 ACACCCCAATACGAGTTAGGG 59.164 52.381 6.53 6.53 40.58 3.53
138 139 2.259014 ACCCCAATACGAGTTAGGGT 57.741 50.000 7.58 7.58 43.04 4.34
139 140 2.237893 CACCCCAATACGAGTTAGGGTT 59.762 50.000 9.95 0.00 45.61 4.11
140 141 2.914941 ACCCCAATACGAGTTAGGGTTT 59.085 45.455 7.58 0.00 45.61 3.27
141 142 3.275999 CCCCAATACGAGTTAGGGTTTG 58.724 50.000 0.00 0.00 37.84 2.93
142 143 2.681344 CCCAATACGAGTTAGGGTTTGC 59.319 50.000 0.00 0.00 34.75 3.68
143 144 2.681344 CCAATACGAGTTAGGGTTTGCC 59.319 50.000 0.00 0.00 0.00 4.52
144 145 3.606687 CAATACGAGTTAGGGTTTGCCT 58.393 45.455 0.00 0.00 34.45 4.75
145 146 3.538634 ATACGAGTTAGGGTTTGCCTC 57.461 47.619 0.00 0.00 34.45 4.70
146 147 1.053424 ACGAGTTAGGGTTTGCCTCA 58.947 50.000 0.00 0.00 34.45 3.86
147 148 1.628846 ACGAGTTAGGGTTTGCCTCAT 59.371 47.619 0.00 0.00 34.45 2.90
148 149 2.280628 CGAGTTAGGGTTTGCCTCATC 58.719 52.381 0.00 0.00 34.45 2.92
149 150 2.093447 CGAGTTAGGGTTTGCCTCATCT 60.093 50.000 0.00 0.00 34.45 2.90
150 151 3.536570 GAGTTAGGGTTTGCCTCATCTC 58.463 50.000 0.00 0.00 34.45 2.75
151 152 2.912956 AGTTAGGGTTTGCCTCATCTCA 59.087 45.455 0.00 0.00 34.45 3.27
152 153 3.010420 GTTAGGGTTTGCCTCATCTCAC 58.990 50.000 0.00 0.00 34.45 3.51
153 154 1.366319 AGGGTTTGCCTCATCTCACT 58.634 50.000 0.00 0.00 34.45 3.41
154 155 2.551270 AGGGTTTGCCTCATCTCACTA 58.449 47.619 0.00 0.00 34.45 2.74
155 156 2.237392 AGGGTTTGCCTCATCTCACTAC 59.763 50.000 0.00 0.00 34.45 2.73
156 157 2.237392 GGGTTTGCCTCATCTCACTACT 59.763 50.000 0.00 0.00 34.45 2.57
157 158 3.307762 GGGTTTGCCTCATCTCACTACTT 60.308 47.826 0.00 0.00 34.45 2.24
158 159 3.686726 GGTTTGCCTCATCTCACTACTTG 59.313 47.826 0.00 0.00 0.00 3.16
159 160 4.319177 GTTTGCCTCATCTCACTACTTGT 58.681 43.478 0.00 0.00 0.00 3.16
161 162 2.899900 TGCCTCATCTCACTACTTGTGT 59.100 45.455 0.00 0.00 46.27 3.72
162 163 3.324846 TGCCTCATCTCACTACTTGTGTT 59.675 43.478 0.00 0.00 46.27 3.32
163 164 3.681897 GCCTCATCTCACTACTTGTGTTG 59.318 47.826 0.00 0.00 46.27 3.33
164 165 4.800914 GCCTCATCTCACTACTTGTGTTGT 60.801 45.833 0.00 0.00 46.27 3.32
165 166 4.926238 CCTCATCTCACTACTTGTGTTGTC 59.074 45.833 0.00 0.00 46.27 3.18
166 167 5.509670 CCTCATCTCACTACTTGTGTTGTCA 60.510 44.000 0.00 0.00 46.27 3.58
167 168 6.101650 TCATCTCACTACTTGTGTTGTCAT 57.898 37.500 0.00 0.00 46.27 3.06
168 169 7.227049 TCATCTCACTACTTGTGTTGTCATA 57.773 36.000 0.00 0.00 46.27 2.15
169 170 7.315890 TCATCTCACTACTTGTGTTGTCATAG 58.684 38.462 0.00 0.00 46.27 2.23
170 171 6.650427 TCTCACTACTTGTGTTGTCATAGT 57.350 37.500 0.00 0.00 46.27 2.12
171 172 7.754851 TCTCACTACTTGTGTTGTCATAGTA 57.245 36.000 0.00 0.00 46.27 1.82
172 173 7.817641 TCTCACTACTTGTGTTGTCATAGTAG 58.182 38.462 0.00 0.00 46.27 2.57
173 174 7.447545 TCTCACTACTTGTGTTGTCATAGTAGT 59.552 37.037 0.00 0.00 45.09 2.73
174 175 7.591165 TCACTACTTGTGTTGTCATAGTAGTC 58.409 38.462 9.56 0.00 43.96 2.59
175 176 7.447545 TCACTACTTGTGTTGTCATAGTAGTCT 59.552 37.037 9.56 0.00 43.96 3.24
176 177 8.727910 CACTACTTGTGTTGTCATAGTAGTCTA 58.272 37.037 9.56 0.00 43.96 2.59
177 178 8.728833 ACTACTTGTGTTGTCATAGTAGTCTAC 58.271 37.037 1.39 1.39 43.27 2.59
178 179 7.762588 ACTTGTGTTGTCATAGTAGTCTACT 57.237 36.000 16.65 16.65 42.68 2.57
179 180 8.179509 ACTTGTGTTGTCATAGTAGTCTACTT 57.820 34.615 17.59 3.75 40.14 2.24
180 181 8.298140 ACTTGTGTTGTCATAGTAGTCTACTTC 58.702 37.037 17.59 7.35 40.14 3.01
181 182 7.754851 TGTGTTGTCATAGTAGTCTACTTCA 57.245 36.000 17.59 9.51 40.14 3.02
182 183 8.349568 TGTGTTGTCATAGTAGTCTACTTCAT 57.650 34.615 17.59 3.81 40.14 2.57
183 184 8.803235 TGTGTTGTCATAGTAGTCTACTTCATT 58.197 33.333 17.59 0.00 40.14 2.57
184 185 9.640963 GTGTTGTCATAGTAGTCTACTTCATTT 57.359 33.333 17.59 0.00 40.14 2.32
192 193 7.617041 AGTAGTCTACTTCATTTTGAATGCC 57.383 36.000 6.71 0.00 35.59 4.40
193 194 7.168219 AGTAGTCTACTTCATTTTGAATGCCA 58.832 34.615 6.71 0.00 35.59 4.92
194 195 6.506500 AGTCTACTTCATTTTGAATGCCAG 57.493 37.500 0.00 0.00 35.59 4.85
195 196 5.098211 GTCTACTTCATTTTGAATGCCAGC 58.902 41.667 0.00 0.00 35.59 4.85
196 197 4.766373 TCTACTTCATTTTGAATGCCAGCA 59.234 37.500 0.00 0.00 35.59 4.41
197 198 4.546829 ACTTCATTTTGAATGCCAGCAT 57.453 36.364 0.00 0.00 35.59 3.79
198 199 4.250464 ACTTCATTTTGAATGCCAGCATG 58.750 39.130 5.78 0.00 35.59 4.06
199 200 2.623535 TCATTTTGAATGCCAGCATGC 58.376 42.857 10.51 10.51 36.68 4.06
200 201 2.028020 TCATTTTGAATGCCAGCATGCA 60.028 40.909 21.98 9.31 46.94 3.96
201 202 1.798283 TTTTGAATGCCAGCATGCAC 58.202 45.000 21.98 9.50 45.48 4.57
202 203 0.037139 TTTGAATGCCAGCATGCACC 60.037 50.000 21.98 7.89 45.48 5.01
203 204 2.103538 GAATGCCAGCATGCACCG 59.896 61.111 21.98 7.66 45.48 4.94
204 205 3.420214 GAATGCCAGCATGCACCGG 62.420 63.158 21.98 17.72 45.48 5.28
215 216 3.924507 GCACCGGCAATCCAGATT 58.075 55.556 0.00 0.00 40.72 2.40
216 217 1.729881 GCACCGGCAATCCAGATTC 59.270 57.895 0.00 0.00 40.72 2.52
217 218 0.749454 GCACCGGCAATCCAGATTCT 60.749 55.000 0.00 0.00 40.72 2.40
218 219 1.475034 GCACCGGCAATCCAGATTCTA 60.475 52.381 0.00 0.00 40.72 2.10
219 220 2.811873 GCACCGGCAATCCAGATTCTAT 60.812 50.000 0.00 0.00 40.72 1.98
220 221 3.480470 CACCGGCAATCCAGATTCTATT 58.520 45.455 0.00 0.00 0.00 1.73
221 222 3.499918 CACCGGCAATCCAGATTCTATTC 59.500 47.826 0.00 0.00 0.00 1.75
222 223 2.738846 CCGGCAATCCAGATTCTATTCG 59.261 50.000 0.00 0.00 0.00 3.34
223 224 2.738846 CGGCAATCCAGATTCTATTCGG 59.261 50.000 0.00 0.00 0.00 4.30
224 225 2.485814 GGCAATCCAGATTCTATTCGGC 59.514 50.000 0.00 0.00 0.00 5.54
225 226 2.158449 GCAATCCAGATTCTATTCGGCG 59.842 50.000 0.00 0.00 0.00 6.46
226 227 2.086054 ATCCAGATTCTATTCGGCGC 57.914 50.000 0.00 0.00 0.00 6.53
227 228 0.033504 TCCAGATTCTATTCGGCGCC 59.966 55.000 19.07 19.07 0.00 6.53
228 229 0.034059 CCAGATTCTATTCGGCGCCT 59.966 55.000 26.68 8.66 0.00 5.52
229 230 1.541233 CCAGATTCTATTCGGCGCCTT 60.541 52.381 26.68 11.84 0.00 4.35
230 231 2.288825 CCAGATTCTATTCGGCGCCTTA 60.289 50.000 26.68 12.75 0.00 2.69
231 232 3.390135 CAGATTCTATTCGGCGCCTTAA 58.610 45.455 26.68 18.99 0.00 1.85
232 233 3.807622 CAGATTCTATTCGGCGCCTTAAA 59.192 43.478 26.68 16.26 0.00 1.52
233 234 3.808174 AGATTCTATTCGGCGCCTTAAAC 59.192 43.478 26.68 7.98 0.00 2.01
234 235 1.563111 TCTATTCGGCGCCTTAAACG 58.437 50.000 26.68 10.29 0.00 3.60
235 236 1.135024 TCTATTCGGCGCCTTAAACGT 60.135 47.619 26.68 6.55 0.00 3.99
236 237 1.257155 CTATTCGGCGCCTTAAACGTC 59.743 52.381 26.68 0.00 0.00 4.34
237 238 0.671163 ATTCGGCGCCTTAAACGTCA 60.671 50.000 26.68 1.85 34.02 4.35
238 239 0.671163 TTCGGCGCCTTAAACGTCAT 60.671 50.000 26.68 0.00 34.02 3.06
239 240 0.671163 TCGGCGCCTTAAACGTCATT 60.671 50.000 26.68 0.00 34.02 2.57
240 241 0.167251 CGGCGCCTTAAACGTCATTT 59.833 50.000 26.68 0.00 34.02 2.32
241 242 1.394227 CGGCGCCTTAAACGTCATTTA 59.606 47.619 26.68 0.00 34.02 1.40
242 243 2.777494 GGCGCCTTAAACGTCATTTAC 58.223 47.619 22.15 0.00 34.67 2.01
243 244 2.160022 GGCGCCTTAAACGTCATTTACA 59.840 45.455 22.15 0.00 34.67 2.41
244 245 3.181504 GGCGCCTTAAACGTCATTTACAT 60.182 43.478 22.15 0.00 34.67 2.29
245 246 4.034279 GGCGCCTTAAACGTCATTTACATA 59.966 41.667 22.15 0.00 34.67 2.29
246 247 4.959757 GCGCCTTAAACGTCATTTACATAC 59.040 41.667 0.00 0.00 32.29 2.39
247 248 5.220529 GCGCCTTAAACGTCATTTACATACT 60.221 40.000 0.00 0.00 32.29 2.12
248 249 6.019640 GCGCCTTAAACGTCATTTACATACTA 60.020 38.462 0.00 0.00 32.29 1.82
249 250 7.306983 GCGCCTTAAACGTCATTTACATACTAT 60.307 37.037 0.00 0.00 32.29 2.12
250 251 8.545420 CGCCTTAAACGTCATTTACATACTATT 58.455 33.333 0.00 0.00 32.29 1.73
261 262 9.537192 TCATTTACATACTATTTAGTCAACCGG 57.463 33.333 0.00 0.00 37.73 5.28
262 263 9.321562 CATTTACATACTATTTAGTCAACCGGT 57.678 33.333 0.00 0.00 37.73 5.28
263 264 8.706492 TTTACATACTATTTAGTCAACCGGTG 57.294 34.615 8.52 2.16 37.73 4.94
264 265 5.114081 ACATACTATTTAGTCAACCGGTGC 58.886 41.667 8.52 1.12 37.73 5.01
265 266 3.688694 ACTATTTAGTCAACCGGTGCA 57.311 42.857 8.52 0.00 0.00 4.57
266 267 3.332034 ACTATTTAGTCAACCGGTGCAC 58.668 45.455 8.52 8.80 0.00 4.57
267 268 2.264005 ATTTAGTCAACCGGTGCACA 57.736 45.000 20.43 0.00 0.00 4.57
268 269 1.301423 TTTAGTCAACCGGTGCACAC 58.699 50.000 20.43 6.92 0.00 3.82
269 270 8.946860 TACTATTTAGTCAACCGGTGCACACC 62.947 46.154 20.43 9.88 41.49 4.16
278 279 4.035102 GTGCACACCCCCTCCCTC 62.035 72.222 13.17 0.00 0.00 4.30
279 280 4.270153 TGCACACCCCCTCCCTCT 62.270 66.667 0.00 0.00 0.00 3.69
280 281 3.721706 GCACACCCCCTCCCTCTG 61.722 72.222 0.00 0.00 0.00 3.35
281 282 3.011517 CACACCCCCTCCCTCTGG 61.012 72.222 0.00 0.00 0.00 3.86
282 283 4.354943 ACACCCCCTCCCTCTGGG 62.355 72.222 0.00 0.00 46.11 4.45
298 299 3.493213 GGCCGACCCATTTACACG 58.507 61.111 0.00 0.00 0.00 4.49
299 300 2.757056 GGCCGACCCATTTACACGC 61.757 63.158 0.00 0.00 0.00 5.34
300 301 1.743995 GCCGACCCATTTACACGCT 60.744 57.895 0.00 0.00 0.00 5.07
301 302 1.977594 GCCGACCCATTTACACGCTG 61.978 60.000 0.00 0.00 0.00 5.18
302 303 0.672401 CCGACCCATTTACACGCTGT 60.672 55.000 0.00 0.00 0.00 4.40
303 304 1.153353 CGACCCATTTACACGCTGTT 58.847 50.000 0.00 0.00 0.00 3.16
304 305 1.533731 CGACCCATTTACACGCTGTTT 59.466 47.619 0.00 0.00 0.00 2.83
305 306 2.412325 CGACCCATTTACACGCTGTTTC 60.412 50.000 0.00 0.00 0.00 2.78
306 307 1.883926 ACCCATTTACACGCTGTTTCC 59.116 47.619 0.00 0.00 0.00 3.13
307 308 1.135803 CCCATTTACACGCTGTTTCCG 60.136 52.381 0.00 0.00 0.00 4.30
308 309 1.801771 CCATTTACACGCTGTTTCCGA 59.198 47.619 0.00 0.00 0.00 4.55
309 310 2.159707 CCATTTACACGCTGTTTCCGAG 60.160 50.000 0.00 0.00 0.00 4.63
310 311 2.512485 TTTACACGCTGTTTCCGAGA 57.488 45.000 0.00 0.00 0.00 4.04
311 312 2.060326 TTACACGCTGTTTCCGAGAG 57.940 50.000 0.00 0.00 0.00 3.20
331 332 2.256764 ACAGCTGTGACTCTCGCG 59.743 61.111 20.97 0.00 0.00 5.87
332 333 2.261586 ACAGCTGTGACTCTCGCGA 61.262 57.895 20.97 9.26 0.00 5.87
333 334 1.081175 CAGCTGTGACTCTCGCGAA 60.081 57.895 11.33 0.02 0.00 4.70
334 335 0.664466 CAGCTGTGACTCTCGCGAAA 60.664 55.000 11.33 0.00 0.00 3.46
335 336 0.387878 AGCTGTGACTCTCGCGAAAG 60.388 55.000 11.33 9.68 0.00 2.62
355 356 1.769733 CACAATCGTGCCTTTTGTGG 58.230 50.000 7.04 0.00 44.00 4.17
356 357 1.336440 CACAATCGTGCCTTTTGTGGA 59.664 47.619 7.04 0.00 44.00 4.02
357 358 2.028130 ACAATCGTGCCTTTTGTGGAA 58.972 42.857 0.00 0.00 32.61 3.53
358 359 2.034558 ACAATCGTGCCTTTTGTGGAAG 59.965 45.455 0.00 0.00 32.61 3.46
359 360 0.598065 ATCGTGCCTTTTGTGGAAGC 59.402 50.000 0.00 0.00 0.00 3.86
360 361 0.749818 TCGTGCCTTTTGTGGAAGCA 60.750 50.000 0.00 0.00 0.00 3.91
361 362 0.102120 CGTGCCTTTTGTGGAAGCAA 59.898 50.000 0.00 0.00 0.00 3.91
362 363 1.470632 CGTGCCTTTTGTGGAAGCAAA 60.471 47.619 0.00 0.00 36.67 3.68
363 364 2.626840 GTGCCTTTTGTGGAAGCAAAA 58.373 42.857 4.31 4.31 43.46 2.44
364 365 2.351418 GTGCCTTTTGTGGAAGCAAAAC 59.649 45.455 0.00 0.00 41.62 2.43
365 366 2.235898 TGCCTTTTGTGGAAGCAAAACT 59.764 40.909 0.00 0.00 41.62 2.66
366 367 2.609002 GCCTTTTGTGGAAGCAAAACTG 59.391 45.455 0.00 0.00 41.62 3.16
367 368 3.860641 CCTTTTGTGGAAGCAAAACTGT 58.139 40.909 0.00 0.00 41.62 3.55
368 369 3.618150 CCTTTTGTGGAAGCAAAACTGTG 59.382 43.478 0.00 0.00 41.62 3.66
369 370 4.493547 CTTTTGTGGAAGCAAAACTGTGA 58.506 39.130 0.00 0.00 41.62 3.58
370 371 3.502191 TTGTGGAAGCAAAACTGTGAC 57.498 42.857 0.00 0.00 0.00 3.67
371 372 2.722094 TGTGGAAGCAAAACTGTGACT 58.278 42.857 0.00 0.00 0.00 3.41
372 373 2.682856 TGTGGAAGCAAAACTGTGACTC 59.317 45.455 0.00 0.00 0.00 3.36
373 374 2.945668 GTGGAAGCAAAACTGTGACTCT 59.054 45.455 0.00 0.00 0.00 3.24
374 375 3.002759 GTGGAAGCAAAACTGTGACTCTC 59.997 47.826 0.00 0.00 0.00 3.20
375 376 2.221981 GGAAGCAAAACTGTGACTCTCG 59.778 50.000 0.00 0.00 0.00 4.04
376 377 2.604046 AGCAAAACTGTGACTCTCGT 57.396 45.000 0.00 0.00 0.00 4.18
377 378 2.205074 AGCAAAACTGTGACTCTCGTG 58.795 47.619 0.00 0.00 0.00 4.35
378 379 2.159099 AGCAAAACTGTGACTCTCGTGA 60.159 45.455 0.00 0.00 0.00 4.35
379 380 2.607635 GCAAAACTGTGACTCTCGTGAA 59.392 45.455 0.00 0.00 0.00 3.18
380 381 3.063452 GCAAAACTGTGACTCTCGTGAAA 59.937 43.478 0.00 0.00 0.00 2.69
381 382 4.783450 GCAAAACTGTGACTCTCGTGAAAG 60.783 45.833 0.00 0.00 0.00 2.62
382 383 2.802787 ACTGTGACTCTCGTGAAAGG 57.197 50.000 0.00 0.00 0.00 3.11
383 384 2.307768 ACTGTGACTCTCGTGAAAGGA 58.692 47.619 0.00 0.00 0.00 3.36
384 385 2.693591 ACTGTGACTCTCGTGAAAGGAA 59.306 45.455 0.00 0.00 0.00 3.36
385 386 3.132289 ACTGTGACTCTCGTGAAAGGAAA 59.868 43.478 0.00 0.00 0.00 3.13
386 387 4.119862 CTGTGACTCTCGTGAAAGGAAAA 58.880 43.478 0.00 0.00 0.00 2.29
387 388 4.509616 TGTGACTCTCGTGAAAGGAAAAA 58.490 39.130 0.00 0.00 0.00 1.94
435 436 2.944429 ACGACCGTGACTCTCGTG 59.056 61.111 3.98 0.00 39.14 4.35
436 437 1.596203 ACGACCGTGACTCTCGTGA 60.596 57.895 3.98 0.00 39.14 4.35
437 438 1.162181 ACGACCGTGACTCTCGTGAA 61.162 55.000 3.98 0.00 39.14 3.18
438 439 0.040692 CGACCGTGACTCTCGTGAAA 60.041 55.000 0.24 0.00 0.00 2.69
439 440 1.687628 GACCGTGACTCTCGTGAAAG 58.312 55.000 0.24 0.00 0.00 2.62
440 441 0.318784 ACCGTGACTCTCGTGAAAGC 60.319 55.000 0.24 0.00 0.00 3.51
441 442 0.318699 CCGTGACTCTCGTGAAAGCA 60.319 55.000 0.24 0.00 0.00 3.91
442 443 1.487482 CGTGACTCTCGTGAAAGCAA 58.513 50.000 0.00 0.00 0.00 3.91
443 444 1.858458 CGTGACTCTCGTGAAAGCAAA 59.142 47.619 0.00 0.00 0.00 3.68
444 445 2.284150 CGTGACTCTCGTGAAAGCAAAA 59.716 45.455 0.00 0.00 0.00 2.44
445 446 3.059597 CGTGACTCTCGTGAAAGCAAAAT 60.060 43.478 0.00 0.00 0.00 1.82
446 447 4.458708 GTGACTCTCGTGAAAGCAAAATC 58.541 43.478 0.00 0.00 0.00 2.17
447 448 3.184379 TGACTCTCGTGAAAGCAAAATCG 59.816 43.478 0.00 0.00 0.00 3.34
448 449 3.131396 ACTCTCGTGAAAGCAAAATCGT 58.869 40.909 0.00 0.00 0.00 3.73
449 450 3.059597 ACTCTCGTGAAAGCAAAATCGTG 60.060 43.478 0.00 0.00 0.00 4.35
450 451 1.971962 CTCGTGAAAGCAAAATCGTGC 59.028 47.619 0.00 0.00 45.28 5.34
451 452 1.052287 CGTGAAAGCAAAATCGTGCC 58.948 50.000 0.00 0.00 46.14 5.01
452 453 1.418373 GTGAAAGCAAAATCGTGCCC 58.582 50.000 0.00 0.00 46.14 5.36
453 454 0.316841 TGAAAGCAAAATCGTGCCCC 59.683 50.000 0.00 0.00 46.14 5.80
454 455 0.603065 GAAAGCAAAATCGTGCCCCT 59.397 50.000 0.00 0.00 46.14 4.79
455 456 0.603065 AAAGCAAAATCGTGCCCCTC 59.397 50.000 0.00 0.00 46.14 4.30
456 457 1.586154 AAGCAAAATCGTGCCCCTCG 61.586 55.000 0.00 0.00 46.14 4.63
457 458 2.332654 GCAAAATCGTGCCCCTCGT 61.333 57.895 0.00 0.00 38.66 4.18
458 459 1.501741 CAAAATCGTGCCCCTCGTG 59.498 57.895 0.00 0.00 0.00 4.35
459 460 1.674322 AAAATCGTGCCCCTCGTGG 60.674 57.895 0.00 0.00 0.00 4.94
460 461 2.119484 AAAATCGTGCCCCTCGTGGA 62.119 55.000 4.76 0.00 35.39 4.02
461 462 2.119484 AAATCGTGCCCCTCGTGGAA 62.119 55.000 4.76 0.00 35.39 3.53
462 463 2.521958 AATCGTGCCCCTCGTGGAAG 62.522 60.000 4.76 0.00 35.39 3.46
463 464 3.691342 CGTGCCCCTCGTGGAAGA 61.691 66.667 4.76 0.00 35.39 2.87
464 465 2.747686 GTGCCCCTCGTGGAAGAA 59.252 61.111 4.76 0.00 35.39 2.52
465 466 1.072505 GTGCCCCTCGTGGAAGAAA 59.927 57.895 4.76 0.00 35.39 2.52
466 467 0.536460 GTGCCCCTCGTGGAAGAAAA 60.536 55.000 4.76 0.00 35.39 2.29
467 468 0.183971 TGCCCCTCGTGGAAGAAAAA 59.816 50.000 4.76 0.00 35.39 1.94
468 469 0.596577 GCCCCTCGTGGAAGAAAAAC 59.403 55.000 4.76 0.00 35.39 2.43
469 470 1.244816 CCCCTCGTGGAAGAAAAACC 58.755 55.000 4.76 0.00 35.39 3.27
470 471 0.872388 CCCTCGTGGAAGAAAAACCG 59.128 55.000 4.76 0.00 35.39 4.44
471 472 1.589803 CCTCGTGGAAGAAAAACCGT 58.410 50.000 0.00 0.00 34.57 4.83
472 473 1.263217 CCTCGTGGAAGAAAAACCGTG 59.737 52.381 0.00 0.00 34.57 4.94
473 474 2.206750 CTCGTGGAAGAAAAACCGTGA 58.793 47.619 0.00 0.00 0.00 4.35
474 475 1.935199 TCGTGGAAGAAAAACCGTGAC 59.065 47.619 0.00 0.00 0.00 3.67
475 476 1.937899 CGTGGAAGAAAAACCGTGACT 59.062 47.619 0.00 0.00 0.00 3.41
476 477 2.033151 CGTGGAAGAAAAACCGTGACTC 60.033 50.000 0.00 0.00 0.00 3.36
477 478 3.203716 GTGGAAGAAAAACCGTGACTCT 58.796 45.455 0.00 0.00 0.00 3.24
478 479 3.247886 GTGGAAGAAAAACCGTGACTCTC 59.752 47.826 0.00 0.00 0.00 3.20
479 480 2.475487 GGAAGAAAAACCGTGACTCTCG 59.525 50.000 0.00 0.00 0.00 4.04
480 481 1.499049 AGAAAAACCGTGACTCTCGC 58.501 50.000 0.00 0.00 0.00 5.03
490 491 3.854286 GTGACTCTCGCGAAAGAAAAA 57.146 42.857 17.91 0.00 0.00 1.94
491 492 3.788941 GTGACTCTCGCGAAAGAAAAAG 58.211 45.455 17.91 0.00 0.00 2.27
492 493 3.489785 GTGACTCTCGCGAAAGAAAAAGA 59.510 43.478 17.91 3.15 0.00 2.52
493 494 4.025979 GTGACTCTCGCGAAAGAAAAAGAA 60.026 41.667 17.91 0.00 0.00 2.52
494 495 4.569162 TGACTCTCGCGAAAGAAAAAGAAA 59.431 37.500 17.91 0.00 0.00 2.52
495 496 5.064198 TGACTCTCGCGAAAGAAAAAGAAAA 59.936 36.000 17.91 0.00 0.00 2.29
496 497 5.875930 ACTCTCGCGAAAGAAAAAGAAAAA 58.124 33.333 17.91 0.00 0.00 1.94
555 556 6.687081 TTTTGGTCGAAAAGCTAAGAAAGA 57.313 33.333 0.00 0.00 0.00 2.52
556 557 5.668558 TTGGTCGAAAAGCTAAGAAAGAC 57.331 39.130 0.00 0.00 0.00 3.01
557 558 4.062991 TGGTCGAAAAGCTAAGAAAGACC 58.937 43.478 14.98 14.98 45.03 3.85
558 559 3.123116 GGTCGAAAAGCTAAGAAAGACCG 59.877 47.826 9.27 0.00 37.71 4.79
559 560 3.123116 GTCGAAAAGCTAAGAAAGACCGG 59.877 47.826 0.00 0.00 0.00 5.28
560 561 3.064931 CGAAAAGCTAAGAAAGACCGGT 58.935 45.455 6.92 6.92 0.00 5.28
561 562 3.120649 CGAAAAGCTAAGAAAGACCGGTG 60.121 47.826 14.63 0.00 0.00 4.94
562 563 3.764237 AAAGCTAAGAAAGACCGGTGA 57.236 42.857 14.63 0.00 0.00 4.02
563 564 3.764237 AAGCTAAGAAAGACCGGTGAA 57.236 42.857 14.63 0.00 0.00 3.18
564 565 3.764237 AGCTAAGAAAGACCGGTGAAA 57.236 42.857 14.63 0.00 0.00 2.69
565 566 4.081322 AGCTAAGAAAGACCGGTGAAAA 57.919 40.909 14.63 0.00 0.00 2.29
566 567 4.457466 AGCTAAGAAAGACCGGTGAAAAA 58.543 39.130 14.63 0.00 0.00 1.94
608 609 8.975410 ACCTGAAAAATAACCGTTTAAATAGC 57.025 30.769 0.00 0.00 0.00 2.97
609 610 8.030692 ACCTGAAAAATAACCGTTTAAATAGCC 58.969 33.333 0.00 0.00 0.00 3.93
610 611 7.219344 CCTGAAAAATAACCGTTTAAATAGCCG 59.781 37.037 0.00 0.00 0.00 5.52
611 612 7.814642 TGAAAAATAACCGTTTAAATAGCCGA 58.185 30.769 0.00 0.00 0.00 5.54
612 613 8.295288 TGAAAAATAACCGTTTAAATAGCCGAA 58.705 29.630 0.00 0.00 0.00 4.30
613 614 9.127006 GAAAAATAACCGTTTAAATAGCCGAAA 57.873 29.630 0.00 0.00 0.00 3.46
614 615 9.473640 AAAAATAACCGTTTAAATAGCCGAAAA 57.526 25.926 0.00 0.00 0.00 2.29
615 616 8.451687 AAATAACCGTTTAAATAGCCGAAAAC 57.548 30.769 0.00 0.00 0.00 2.43
618 619 2.519188 CGTTTAAATAGCCGAAAACGCG 59.481 45.455 3.53 3.53 44.94 6.01
619 620 3.481839 GTTTAAATAGCCGAAAACGCGT 58.518 40.909 5.58 5.58 0.00 6.01
620 621 2.791417 TAAATAGCCGAAAACGCGTG 57.209 45.000 14.98 0.00 0.00 5.34
621 622 0.453782 AAATAGCCGAAAACGCGTGC 60.454 50.000 14.98 12.13 0.00 5.34
622 623 2.557265 AATAGCCGAAAACGCGTGCG 62.557 55.000 14.98 17.33 46.03 5.34
625 626 4.003011 CCGAAAACGCGTGCGGAA 62.003 61.111 31.93 0.00 46.29 4.30
626 627 2.052941 CGAAAACGCGTGCGGAAA 60.053 55.556 14.98 0.00 44.69 3.13
627 628 1.651730 CGAAAACGCGTGCGGAAAA 60.652 52.632 14.98 0.00 44.69 2.29
628 629 1.194896 CGAAAACGCGTGCGGAAAAA 61.195 50.000 14.98 0.00 44.69 1.94
629 630 1.125270 GAAAACGCGTGCGGAAAAAT 58.875 45.000 14.98 0.00 44.69 1.82
630 631 2.308811 GAAAACGCGTGCGGAAAAATA 58.691 42.857 14.98 0.00 44.69 1.40
631 632 2.402640 AAACGCGTGCGGAAAAATAA 57.597 40.000 14.98 0.00 44.69 1.40
632 633 2.402640 AACGCGTGCGGAAAAATAAA 57.597 40.000 14.98 0.00 44.69 1.40
633 634 2.402640 ACGCGTGCGGAAAAATAAAA 57.597 40.000 12.93 0.00 44.69 1.52
634 635 2.728922 ACGCGTGCGGAAAAATAAAAA 58.271 38.095 12.93 0.00 44.69 1.94
655 656 3.941081 TCCAGAAGGAGCGCCTAG 58.059 61.111 10.31 2.79 46.28 3.02
656 657 1.306633 TCCAGAAGGAGCGCCTAGA 59.693 57.895 10.31 1.66 46.28 2.43
657 658 0.753479 TCCAGAAGGAGCGCCTAGAG 60.753 60.000 10.31 2.00 46.28 2.43
658 659 1.040339 CCAGAAGGAGCGCCTAGAGT 61.040 60.000 10.31 0.00 46.28 3.24
659 660 0.102120 CAGAAGGAGCGCCTAGAGTG 59.898 60.000 10.31 1.00 46.28 3.51
667 668 2.567049 GCCTAGAGTGCGACACGT 59.433 61.111 0.00 0.00 39.64 4.49
668 669 1.801913 GCCTAGAGTGCGACACGTG 60.802 63.158 15.48 15.48 39.64 4.49
669 670 1.154016 CCTAGAGTGCGACACGTGG 60.154 63.158 21.57 3.72 39.64 4.94
670 671 1.801913 CTAGAGTGCGACACGTGGC 60.802 63.158 21.57 17.52 39.64 5.01
671 672 2.472232 CTAGAGTGCGACACGTGGCA 62.472 60.000 23.63 18.55 41.94 4.92
672 673 2.077821 TAGAGTGCGACACGTGGCAA 62.078 55.000 23.63 5.84 45.49 4.52
673 674 2.512745 AGTGCGACACGTGGCAAA 60.513 55.556 23.63 5.40 45.49 3.68
674 675 1.841663 GAGTGCGACACGTGGCAAAT 61.842 55.000 23.63 8.13 45.49 2.32
675 676 1.725625 GTGCGACACGTGGCAAATG 60.726 57.895 23.63 5.86 45.49 2.32
676 677 2.126888 GCGACACGTGGCAAATGG 60.127 61.111 23.63 5.43 34.31 3.16
677 678 2.126888 CGACACGTGGCAAATGGC 60.127 61.111 23.63 0.00 43.74 4.40
678 679 2.616330 CGACACGTGGCAAATGGCT 61.616 57.895 23.63 0.00 44.01 4.75
679 680 1.081242 GACACGTGGCAAATGGCTG 60.081 57.895 18.77 3.73 44.01 4.85
680 681 1.514678 GACACGTGGCAAATGGCTGA 61.515 55.000 18.77 0.00 44.01 4.26
681 682 1.210931 CACGTGGCAAATGGCTGAG 59.789 57.895 7.95 2.59 44.01 3.35
682 683 1.073025 ACGTGGCAAATGGCTGAGA 59.927 52.632 8.50 0.00 44.01 3.27
683 684 0.957395 ACGTGGCAAATGGCTGAGAG 60.957 55.000 8.50 0.00 44.01 3.20
684 685 1.509923 GTGGCAAATGGCTGAGAGC 59.490 57.895 8.50 0.00 44.01 4.09
685 686 2.042259 TGGCAAATGGCTGAGAGCG 61.042 57.895 8.50 0.00 43.62 5.03
686 687 2.101770 GCAAATGGCTGAGAGCGC 59.898 61.111 0.00 0.00 43.62 5.92
687 688 2.402388 CAAATGGCTGAGAGCGCG 59.598 61.111 0.00 0.00 43.62 6.86
688 689 3.503363 AAATGGCTGAGAGCGCGC 61.503 61.111 26.66 26.66 43.62 6.86
694 695 3.485431 CTGAGAGCGCGCCAAGTG 61.485 66.667 30.33 12.20 0.00 3.16
705 706 2.434884 CCAAGTGGCGCTGATCGT 60.435 61.111 7.64 0.00 41.07 3.73
706 707 2.034879 CCAAGTGGCGCTGATCGTT 61.035 57.895 7.64 0.00 41.07 3.85
707 708 1.133253 CAAGTGGCGCTGATCGTTG 59.867 57.895 7.64 0.00 41.07 4.10
708 709 2.680913 AAGTGGCGCTGATCGTTGC 61.681 57.895 7.64 0.00 41.07 4.17
713 714 4.505217 CGCTGATCGTTGCGTGGC 62.505 66.667 16.02 0.00 46.09 5.01
714 715 3.121030 GCTGATCGTTGCGTGGCT 61.121 61.111 0.00 0.00 0.00 4.75
715 716 3.084579 CTGATCGTTGCGTGGCTC 58.915 61.111 0.00 0.00 0.00 4.70
716 717 2.434185 TGATCGTTGCGTGGCTCC 60.434 61.111 0.00 0.00 0.00 4.70
717 718 3.195698 GATCGTTGCGTGGCTCCC 61.196 66.667 0.00 0.00 0.00 4.30
718 719 3.950794 GATCGTTGCGTGGCTCCCA 62.951 63.158 0.00 0.00 0.00 4.37
719 720 3.545124 ATCGTTGCGTGGCTCCCAA 62.545 57.895 0.00 0.00 34.18 4.12
720 721 3.283684 CGTTGCGTGGCTCCCAAA 61.284 61.111 0.00 0.00 34.18 3.28
721 722 2.644992 GTTGCGTGGCTCCCAAAG 59.355 61.111 0.00 0.00 34.18 2.77
722 723 2.597217 TTGCGTGGCTCCCAAAGG 60.597 61.111 0.00 0.00 34.18 3.11
723 724 3.126703 TTGCGTGGCTCCCAAAGGA 62.127 57.895 0.00 0.00 41.08 3.36
724 725 2.282180 GCGTGGCTCCCAAAGGAA 60.282 61.111 0.00 0.00 43.40 3.36
725 726 2.626780 GCGTGGCTCCCAAAGGAAC 61.627 63.158 0.00 0.00 43.40 3.62
726 727 2.325082 CGTGGCTCCCAAAGGAACG 61.325 63.158 0.00 0.00 43.40 3.95
727 728 2.282180 TGGCTCCCAAAGGAACGC 60.282 61.111 0.00 0.00 43.40 4.84
728 729 2.034221 GGCTCCCAAAGGAACGCT 59.966 61.111 0.00 0.00 43.40 5.07
729 730 2.041115 GGCTCCCAAAGGAACGCTC 61.041 63.158 0.00 0.00 43.40 5.03
730 731 2.391389 GCTCCCAAAGGAACGCTCG 61.391 63.158 0.00 0.00 43.40 5.03
731 732 1.004918 CTCCCAAAGGAACGCTCGT 60.005 57.895 0.00 0.00 43.40 4.18
732 733 0.602905 CTCCCAAAGGAACGCTCGTT 60.603 55.000 7.43 7.43 43.40 3.85
733 734 0.680618 TCCCAAAGGAACGCTCGTTA 59.319 50.000 7.70 0.00 40.08 3.18
734 735 1.070445 TCCCAAAGGAACGCTCGTTAA 59.930 47.619 7.70 0.00 40.08 2.01
735 736 1.196127 CCCAAAGGAACGCTCGTTAAC 59.804 52.381 7.70 4.66 38.60 2.01
736 737 1.196127 CCAAAGGAACGCTCGTTAACC 59.804 52.381 7.70 6.25 38.60 2.85
737 738 1.868498 CAAAGGAACGCTCGTTAACCA 59.132 47.619 7.70 0.00 38.60 3.67
738 739 1.792006 AAGGAACGCTCGTTAACCAG 58.208 50.000 7.70 0.00 38.60 4.00
739 740 0.677842 AGGAACGCTCGTTAACCAGT 59.322 50.000 7.70 0.00 38.60 4.00
740 741 0.788391 GGAACGCTCGTTAACCAGTG 59.212 55.000 11.61 11.61 38.60 3.66
741 742 0.788391 GAACGCTCGTTAACCAGTGG 59.212 55.000 16.55 7.91 38.60 4.00
742 743 1.226030 AACGCTCGTTAACCAGTGGC 61.226 55.000 16.55 5.97 36.46 5.01
743 744 1.374252 CGCTCGTTAACCAGTGGCT 60.374 57.895 9.78 0.00 0.00 4.75
744 745 1.352156 CGCTCGTTAACCAGTGGCTC 61.352 60.000 9.78 0.00 0.00 4.70
745 746 1.019805 GCTCGTTAACCAGTGGCTCC 61.020 60.000 9.78 0.00 0.00 4.70
746 747 0.391263 CTCGTTAACCAGTGGCTCCC 60.391 60.000 9.78 0.00 0.00 4.30
767 768 0.035458 ACAGCAGGTCTCCGAAAAGG 59.965 55.000 0.00 0.00 42.97 3.11
769 770 0.836400 AGCAGGTCTCCGAAAAGGGA 60.836 55.000 0.00 0.00 41.52 4.20
770 771 0.036306 GCAGGTCTCCGAAAAGGGAA 59.964 55.000 0.00 0.00 41.52 3.97
771 772 1.544759 GCAGGTCTCCGAAAAGGGAAA 60.545 52.381 0.00 0.00 41.52 3.13
811 812 0.814010 CTCCCTTTGTAATCGGCCCG 60.814 60.000 0.00 0.00 0.00 6.13
816 817 2.011222 CTTTGTAATCGGCCCGCTAAA 58.989 47.619 0.00 0.00 0.00 1.85
852 853 3.227250 CCATACGGTGGGAGGGAC 58.773 66.667 1.42 0.00 44.79 4.46
918 919 1.762460 ATACCTCTCCCGTGCCAGG 60.762 63.158 0.00 0.00 0.00 4.45
1386 1399 3.147595 CCGGACCAGATCGAGGCA 61.148 66.667 0.00 0.00 0.00 4.75
1638 1651 0.761187 TCCACAGCAGGATATGGCTC 59.239 55.000 0.00 0.00 38.56 4.70
1782 1795 1.434287 TGCTGCTGCAGTTGTTGTG 59.566 52.632 28.50 4.24 45.31 3.33
1962 1975 3.192944 ACTGAATGATCCTTTCCTGGGA 58.807 45.455 0.00 0.00 37.26 4.37
2070 2083 1.271102 TGCCGTATACATCGCTGCATA 59.729 47.619 3.32 0.00 0.00 3.14
2175 2188 5.307544 AGCTAGATGCCAAGATTGATTCT 57.692 39.130 0.00 0.00 44.23 2.40
2206 2219 4.478206 ACTCTCATCATGACGACCAATT 57.522 40.909 0.00 0.00 0.00 2.32
2283 2296 1.696063 ACATGCTGGCAAAGAGTGTT 58.304 45.000 0.00 0.00 0.00 3.32
2364 2377 3.501950 CAGCTTTGAGGCGGTAAAAATC 58.498 45.455 0.00 0.00 37.29 2.17
2397 2410 3.188159 TCGTTGTTAGGCAGTGACTTT 57.812 42.857 2.31 0.00 0.00 2.66
2464 2477 7.491048 TGTTTTGAATGCTTTGTACTCCTTTTC 59.509 33.333 0.00 0.00 0.00 2.29
2539 2553 0.599060 TGCTGTGGTGTCATTGCATG 59.401 50.000 0.00 0.00 32.26 4.06
2555 2569 6.262944 TCATTGCATGTTTTACTGTCTGTCTT 59.737 34.615 0.00 0.00 0.00 3.01
2570 2584 1.881973 TGTCTTGGCTTGTCTGCAATC 59.118 47.619 0.00 0.00 33.65 2.67
2571 2585 1.881973 GTCTTGGCTTGTCTGCAATCA 59.118 47.619 0.00 0.00 33.65 2.57
2583 2597 3.940221 GTCTGCAATCATCTTTGAGCTCT 59.060 43.478 16.19 0.00 34.73 4.09
2594 2608 2.160822 TTGAGCTCTCTGTTGTCTGC 57.839 50.000 16.19 0.00 0.00 4.26
2616 2638 7.231722 TCTGCCTAGCCTGTTAAACATTTTTAA 59.768 33.333 0.00 0.00 35.26 1.52
2688 2710 2.026915 TGTGTGATGGGTCATCTTCCTG 60.027 50.000 9.00 0.00 41.06 3.86
2694 2716 0.326264 GGGTCATCTTCCTGCACAGT 59.674 55.000 0.00 0.00 0.00 3.55
2701 2723 3.845781 TCTTCCTGCACAGTTTCTCTT 57.154 42.857 0.00 0.00 0.00 2.85
2739 2762 9.594936 AACAACTAGGAGAGCATATATTCTACT 57.405 33.333 4.83 4.83 38.21 2.57
2742 2765 7.934313 ACTAGGAGAGCATATATTCTACTCCA 58.066 38.462 21.24 12.68 43.06 3.86
2745 2768 8.995027 AGGAGAGCATATATTCTACTCCATAG 57.005 38.462 21.24 0.00 43.06 2.23
2746 2769 8.565239 AGGAGAGCATATATTCTACTCCATAGT 58.435 37.037 21.24 8.05 43.06 2.12
2757 2780 7.786046 TTCTACTCCATAGTTTGTAGTGGAA 57.214 36.000 2.12 2.12 40.03 3.53
2758 2781 7.973048 TCTACTCCATAGTTTGTAGTGGAAT 57.027 36.000 0.00 0.00 40.03 3.01
2759 2782 8.008513 TCTACTCCATAGTTTGTAGTGGAATC 57.991 38.462 0.00 0.00 40.03 2.52
2760 2783 6.875972 ACTCCATAGTTTGTAGTGGAATCT 57.124 37.500 0.00 0.00 40.03 2.40
2761 2784 6.879400 ACTCCATAGTTTGTAGTGGAATCTC 58.121 40.000 0.00 0.00 40.03 2.75
2762 2785 6.670027 ACTCCATAGTTTGTAGTGGAATCTCT 59.330 38.462 0.00 0.00 40.03 3.10
2764 2787 8.603898 TCCATAGTTTGTAGTGGAATCTCTAA 57.396 34.615 0.00 0.00 37.78 2.10
2765 2788 9.042450 TCCATAGTTTGTAGTGGAATCTCTAAA 57.958 33.333 0.00 0.00 37.78 1.85
2766 2789 9.319143 CCATAGTTTGTAGTGGAATCTCTAAAG 57.681 37.037 0.00 0.00 33.53 1.85
2825 2848 9.727859 TTACAAATAACTAACTACTGGAATGCA 57.272 29.630 0.00 0.00 0.00 3.96
2826 2849 8.807948 ACAAATAACTAACTACTGGAATGCAT 57.192 30.769 0.00 0.00 0.00 3.96
2851 2874 3.623060 AGCAATTACAAGGCACATAGACG 59.377 43.478 0.00 0.00 0.00 4.18
2852 2875 3.374058 GCAATTACAAGGCACATAGACGT 59.626 43.478 0.00 0.00 0.00 4.34
2853 2876 4.727734 GCAATTACAAGGCACATAGACGTG 60.728 45.833 0.00 0.00 40.95 4.49
2870 2893 2.181021 GCTCCAGCTGCACAATGC 59.819 61.111 8.66 1.76 45.29 3.56
2893 2916 4.371624 TCATGGTGGAGTCAAATTCTGT 57.628 40.909 0.00 0.00 0.00 3.41
2897 2920 6.430925 TCATGGTGGAGTCAAATTCTGTTTAG 59.569 38.462 0.00 0.00 0.00 1.85
2934 2957 8.528643 CATTCATAATATGCATGGATCCTGTTT 58.471 33.333 14.23 3.85 31.55 2.83
2955 2978 2.791383 TTGATGGAACCAAGTTTGCG 57.209 45.000 0.00 0.00 0.00 4.85
2967 2990 0.605319 AGTTTGCGCTGAAATCGGGA 60.605 50.000 9.73 0.00 0.00 5.14
3004 3027 4.662468 AGCTATGTATGTGTGTCCTGAG 57.338 45.455 0.00 0.00 0.00 3.35
3005 3028 3.386078 AGCTATGTATGTGTGTCCTGAGG 59.614 47.826 0.00 0.00 0.00 3.86
3006 3029 2.698855 ATGTATGTGTGTCCTGAGGC 57.301 50.000 0.00 0.00 0.00 4.70
3007 3030 1.644509 TGTATGTGTGTCCTGAGGCT 58.355 50.000 0.00 0.00 0.00 4.58
3013 3036 0.321671 TGTGTCCTGAGGCTTGTAGC 59.678 55.000 0.00 0.00 41.46 3.58
3049 3072 0.179000 GAGTCTGTGTGGCATAGGGG 59.821 60.000 0.00 0.00 0.00 4.79
3050 3073 1.224592 GTCTGTGTGGCATAGGGGG 59.775 63.158 0.00 0.00 0.00 5.40
3067 3106 0.400594 GGGGCCTATCCGTAGCAATT 59.599 55.000 0.84 0.00 34.94 2.32
3076 3115 6.041069 GCCTATCCGTAGCAATTATCTAGGAT 59.959 42.308 14.69 14.69 0.00 3.24
3103 3142 0.179062 CTCATCAGCACTGGGGCTAC 60.179 60.000 0.00 0.00 43.68 3.58
3104 3143 0.909133 TCATCAGCACTGGGGCTACA 60.909 55.000 0.00 0.00 43.68 2.74
3110 3149 1.685224 CACTGGGGCTACACACCAT 59.315 57.895 0.00 0.00 33.07 3.55
3113 3152 1.176527 CTGGGGCTACACACCATTTG 58.823 55.000 0.00 0.00 33.07 2.32
3119 3158 3.439129 GGGCTACACACCATTTGAACTAC 59.561 47.826 0.00 0.00 0.00 2.73
3120 3159 3.439129 GGCTACACACCATTTGAACTACC 59.561 47.826 0.00 0.00 0.00 3.18
3121 3160 3.124636 GCTACACACCATTTGAACTACCG 59.875 47.826 0.00 0.00 0.00 4.02
3122 3161 3.202829 ACACACCATTTGAACTACCGT 57.797 42.857 0.00 0.00 0.00 4.83
3123 3162 3.547746 ACACACCATTTGAACTACCGTT 58.452 40.909 0.00 0.00 35.68 4.44
3124 3163 3.314080 ACACACCATTTGAACTACCGTTG 59.686 43.478 0.00 0.00 32.39 4.10
3139 3180 6.704310 ACTACCGTTGTTCCATGTATAAGTT 58.296 36.000 0.00 0.00 0.00 2.66
3141 3182 6.973229 ACCGTTGTTCCATGTATAAGTTAC 57.027 37.500 0.00 0.00 0.00 2.50
3142 3183 6.704310 ACCGTTGTTCCATGTATAAGTTACT 58.296 36.000 0.00 0.00 0.00 2.24
3143 3184 7.839907 ACCGTTGTTCCATGTATAAGTTACTA 58.160 34.615 0.00 0.00 0.00 1.82
3144 3185 7.761249 ACCGTTGTTCCATGTATAAGTTACTAC 59.239 37.037 0.00 0.00 0.00 2.73
3145 3186 7.977853 CCGTTGTTCCATGTATAAGTTACTACT 59.022 37.037 0.00 0.00 35.68 2.57
3149 3190 9.209048 TGTTCCATGTATAAGTTACTACTGGAT 57.791 33.333 14.87 0.00 34.01 3.41
3156 3197 9.325198 TGTATAAGTTACTACTGGATTGCATTG 57.675 33.333 0.00 0.00 34.01 2.82
3174 3215 4.362279 CATTGCAATTACAGGGCACATAC 58.638 43.478 9.83 0.00 37.26 2.39
3175 3216 3.364460 TGCAATTACAGGGCACATACT 57.636 42.857 0.00 0.00 31.58 2.12
3202 3244 1.202964 TGGCTGCCCTATCAATCATGG 60.203 52.381 17.53 0.00 0.00 3.66
3219 3261 5.471556 TCATGGTGCAGTCAAATTTTGAT 57.528 34.783 14.54 2.42 42.47 2.57
3221 3263 6.990798 TCATGGTGCAGTCAAATTTTGATTA 58.009 32.000 14.54 0.00 42.47 1.75
3222 3264 7.092079 TCATGGTGCAGTCAAATTTTGATTAG 58.908 34.615 14.54 8.96 42.47 1.73
3223 3265 6.403866 TGGTGCAGTCAAATTTTGATTAGT 57.596 33.333 14.54 0.00 42.47 2.24
3224 3266 6.215121 TGGTGCAGTCAAATTTTGATTAGTG 58.785 36.000 14.54 10.82 42.47 2.74
3225 3267 5.634859 GGTGCAGTCAAATTTTGATTAGTGG 59.365 40.000 14.54 1.16 42.47 4.00
3226 3268 6.215845 GTGCAGTCAAATTTTGATTAGTGGT 58.784 36.000 14.54 0.00 42.47 4.16
3227 3269 7.367285 GTGCAGTCAAATTTTGATTAGTGGTA 58.633 34.615 14.54 0.00 42.47 3.25
3228 3270 7.326063 GTGCAGTCAAATTTTGATTAGTGGTAC 59.674 37.037 14.54 5.45 42.47 3.34
3229 3271 6.806739 GCAGTCAAATTTTGATTAGTGGTACC 59.193 38.462 14.54 4.43 42.47 3.34
3230 3272 7.312899 CAGTCAAATTTTGATTAGTGGTACCC 58.687 38.462 14.54 0.32 42.47 3.69
3231 3273 7.176690 CAGTCAAATTTTGATTAGTGGTACCCT 59.823 37.037 14.54 8.75 42.47 4.34
3232 3274 7.393515 AGTCAAATTTTGATTAGTGGTACCCTC 59.606 37.037 14.54 2.55 42.47 4.30
3233 3275 6.373216 TCAAATTTTGATTAGTGGTACCCTCG 59.627 38.462 10.07 0.00 34.08 4.63
3234 3276 5.687166 ATTTTGATTAGTGGTACCCTCGA 57.313 39.130 10.07 0.00 0.00 4.04
3235 3277 5.486735 TTTTGATTAGTGGTACCCTCGAA 57.513 39.130 10.07 5.87 0.00 3.71
3236 3278 5.687166 TTTGATTAGTGGTACCCTCGAAT 57.313 39.130 10.07 10.38 0.00 3.34
3237 3279 5.687166 TTGATTAGTGGTACCCTCGAATT 57.313 39.130 10.07 0.00 0.00 2.17
3238 3280 5.687166 TGATTAGTGGTACCCTCGAATTT 57.313 39.130 10.07 0.00 0.00 1.82
3239 3281 6.057321 TGATTAGTGGTACCCTCGAATTTT 57.943 37.500 10.07 0.00 0.00 1.82
3240 3282 6.478129 TGATTAGTGGTACCCTCGAATTTTT 58.522 36.000 10.07 0.00 0.00 1.94
3278 3320 2.847959 TGCATTCATAACACGCATGG 57.152 45.000 0.00 0.00 0.00 3.66
3282 3324 3.003585 GCATTCATAACACGCATGGATCA 59.996 43.478 0.00 0.00 0.00 2.92
3291 3333 3.947196 ACACGCATGGATCATGTTAACAT 59.053 39.130 15.47 15.47 43.10 2.71
3295 3337 6.020440 CACGCATGGATCATGTTAACATTTTC 60.020 38.462 18.50 16.34 43.10 2.29
3296 3338 6.127647 ACGCATGGATCATGTTAACATTTTCT 60.128 34.615 18.50 3.77 43.10 2.52
3297 3339 7.066887 ACGCATGGATCATGTTAACATTTTCTA 59.933 33.333 18.50 15.15 43.10 2.10
3298 3340 7.588854 CGCATGGATCATGTTAACATTTTCTAG 59.411 37.037 18.50 6.68 43.10 2.43
3299 3341 8.623903 GCATGGATCATGTTAACATTTTCTAGA 58.376 33.333 18.50 11.75 43.10 2.43
3302 3344 9.904198 TGGATCATGTTAACATTTTCTAGATCA 57.096 29.630 27.95 18.76 33.53 2.92
3309 3351 9.677567 TGTTAACATTTTCTAGATCAGTTTTGC 57.322 29.630 3.59 0.00 0.00 3.68
3310 3352 9.899226 GTTAACATTTTCTAGATCAGTTTTGCT 57.101 29.630 0.00 0.00 0.00 3.91
3315 3357 9.070149 CATTTTCTAGATCAGTTTTGCTAAAGC 57.930 33.333 0.00 0.00 42.50 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.541143 GTCAAGGAACCAAGAAAAATAAAATGA 57.459 29.630 0.00 0.00 0.00 2.57
2 3 9.323985 TGTCAAGGAACCAAGAAAAATAAAATG 57.676 29.630 0.00 0.00 0.00 2.32
3 4 9.546428 CTGTCAAGGAACCAAGAAAAATAAAAT 57.454 29.630 0.00 0.00 0.00 1.82
4 5 8.754080 TCTGTCAAGGAACCAAGAAAAATAAAA 58.246 29.630 0.00 0.00 0.00 1.52
5 6 8.194769 GTCTGTCAAGGAACCAAGAAAAATAAA 58.805 33.333 0.00 0.00 0.00 1.40
6 7 7.340743 TGTCTGTCAAGGAACCAAGAAAAATAA 59.659 33.333 0.00 0.00 0.00 1.40
7 8 6.831353 TGTCTGTCAAGGAACCAAGAAAAATA 59.169 34.615 0.00 0.00 0.00 1.40
8 9 5.656416 TGTCTGTCAAGGAACCAAGAAAAAT 59.344 36.000 0.00 0.00 0.00 1.82
9 10 5.013547 TGTCTGTCAAGGAACCAAGAAAAA 58.986 37.500 0.00 0.00 0.00 1.94
10 11 4.594970 TGTCTGTCAAGGAACCAAGAAAA 58.405 39.130 0.00 0.00 0.00 2.29
11 12 4.199310 CTGTCTGTCAAGGAACCAAGAAA 58.801 43.478 0.00 0.00 0.00 2.52
12 13 3.199946 ACTGTCTGTCAAGGAACCAAGAA 59.800 43.478 0.00 0.00 0.00 2.52
13 14 2.771943 ACTGTCTGTCAAGGAACCAAGA 59.228 45.455 0.00 0.00 0.00 3.02
14 15 3.199880 ACTGTCTGTCAAGGAACCAAG 57.800 47.619 0.00 0.00 0.00 3.61
15 16 3.054728 TCAACTGTCTGTCAAGGAACCAA 60.055 43.478 0.00 0.00 0.00 3.67
16 17 2.503765 TCAACTGTCTGTCAAGGAACCA 59.496 45.455 0.00 0.00 0.00 3.67
17 18 3.194005 TCAACTGTCTGTCAAGGAACC 57.806 47.619 0.00 0.00 0.00 3.62
18 19 4.576463 ACAATCAACTGTCTGTCAAGGAAC 59.424 41.667 0.00 0.00 0.00 3.62
19 20 4.780815 ACAATCAACTGTCTGTCAAGGAA 58.219 39.130 0.00 0.00 0.00 3.36
20 21 4.422073 ACAATCAACTGTCTGTCAAGGA 57.578 40.909 0.00 0.00 0.00 3.36
21 22 5.505173 AAACAATCAACTGTCTGTCAAGG 57.495 39.130 0.00 0.00 0.00 3.61
22 23 6.789262 AGAAAACAATCAACTGTCTGTCAAG 58.211 36.000 0.00 0.00 0.00 3.02
23 24 6.757897 AGAAAACAATCAACTGTCTGTCAA 57.242 33.333 0.00 0.00 0.00 3.18
24 25 6.374053 TCAAGAAAACAATCAACTGTCTGTCA 59.626 34.615 0.00 0.00 0.00 3.58
25 26 6.688813 GTCAAGAAAACAATCAACTGTCTGTC 59.311 38.462 0.00 0.00 0.00 3.51
26 27 6.404734 GGTCAAGAAAACAATCAACTGTCTGT 60.405 38.462 0.00 0.00 0.00 3.41
27 28 5.973565 GGTCAAGAAAACAATCAACTGTCTG 59.026 40.000 0.00 0.00 0.00 3.51
28 29 5.067805 GGGTCAAGAAAACAATCAACTGTCT 59.932 40.000 0.00 0.00 0.00 3.41
29 30 5.281727 GGGTCAAGAAAACAATCAACTGTC 58.718 41.667 0.00 0.00 0.00 3.51
30 31 4.202010 CGGGTCAAGAAAACAATCAACTGT 60.202 41.667 0.00 0.00 0.00 3.55
31 32 4.202010 ACGGGTCAAGAAAACAATCAACTG 60.202 41.667 0.00 0.00 0.00 3.16
32 33 3.951680 ACGGGTCAAGAAAACAATCAACT 59.048 39.130 0.00 0.00 0.00 3.16
33 34 4.301637 ACGGGTCAAGAAAACAATCAAC 57.698 40.909 0.00 0.00 0.00 3.18
34 35 5.591067 ACTTACGGGTCAAGAAAACAATCAA 59.409 36.000 0.00 0.00 0.00 2.57
35 36 5.127491 ACTTACGGGTCAAGAAAACAATCA 58.873 37.500 0.00 0.00 0.00 2.57
36 37 5.684550 ACTTACGGGTCAAGAAAACAATC 57.315 39.130 0.00 0.00 0.00 2.67
37 38 5.591067 TCAACTTACGGGTCAAGAAAACAAT 59.409 36.000 0.00 0.00 0.00 2.71
38 39 4.942483 TCAACTTACGGGTCAAGAAAACAA 59.058 37.500 0.00 0.00 0.00 2.83
39 40 4.515361 TCAACTTACGGGTCAAGAAAACA 58.485 39.130 0.00 0.00 0.00 2.83
40 41 5.488645 TTCAACTTACGGGTCAAGAAAAC 57.511 39.130 0.00 0.00 0.00 2.43
41 42 6.512342 TTTTCAACTTACGGGTCAAGAAAA 57.488 33.333 0.00 0.00 0.00 2.29
42 43 6.512342 TTTTTCAACTTACGGGTCAAGAAA 57.488 33.333 0.00 0.00 0.00 2.52
43 44 6.319152 TGATTTTTCAACTTACGGGTCAAGAA 59.681 34.615 0.00 0.00 0.00 2.52
44 45 5.823570 TGATTTTTCAACTTACGGGTCAAGA 59.176 36.000 0.00 0.00 0.00 3.02
45 46 6.067263 TGATTTTTCAACTTACGGGTCAAG 57.933 37.500 0.00 0.00 0.00 3.02
46 47 6.095720 ACTTGATTTTTCAACTTACGGGTCAA 59.904 34.615 0.00 0.00 0.00 3.18
47 48 5.591067 ACTTGATTTTTCAACTTACGGGTCA 59.409 36.000 0.00 0.00 0.00 4.02
48 49 6.068473 ACTTGATTTTTCAACTTACGGGTC 57.932 37.500 0.00 0.00 0.00 4.46
49 50 5.591067 TGACTTGATTTTTCAACTTACGGGT 59.409 36.000 0.00 0.00 0.00 5.28
50 51 6.067263 TGACTTGATTTTTCAACTTACGGG 57.933 37.500 0.00 0.00 0.00 5.28
51 52 6.725246 ACTGACTTGATTTTTCAACTTACGG 58.275 36.000 0.00 0.00 0.00 4.02
52 53 9.710979 TTAACTGACTTGATTTTTCAACTTACG 57.289 29.630 0.00 0.00 0.00 3.18
59 60 9.734620 CACAATCTTAACTGACTTGATTTTTCA 57.265 29.630 0.00 0.00 0.00 2.69
60 61 9.950680 TCACAATCTTAACTGACTTGATTTTTC 57.049 29.630 0.00 0.00 0.00 2.29
64 65 8.446273 CGATTCACAATCTTAACTGACTTGATT 58.554 33.333 0.00 0.00 35.73 2.57
65 66 7.604164 ACGATTCACAATCTTAACTGACTTGAT 59.396 33.333 0.00 0.00 35.73 2.57
66 67 6.929049 ACGATTCACAATCTTAACTGACTTGA 59.071 34.615 0.00 0.00 35.73 3.02
67 68 7.121974 ACGATTCACAATCTTAACTGACTTG 57.878 36.000 0.00 0.00 35.73 3.16
68 69 8.709646 GTTACGATTCACAATCTTAACTGACTT 58.290 33.333 14.08 0.00 43.61 3.01
69 70 7.870954 TGTTACGATTCACAATCTTAACTGACT 59.129 33.333 18.77 0.00 45.48 3.41
70 71 8.014322 TGTTACGATTCACAATCTTAACTGAC 57.986 34.615 18.77 3.10 45.48 3.51
71 72 8.655970 CATGTTACGATTCACAATCTTAACTGA 58.344 33.333 18.77 7.27 45.48 3.41
72 73 8.655970 TCATGTTACGATTCACAATCTTAACTG 58.344 33.333 18.77 15.39 45.48 3.16
73 74 8.771920 TCATGTTACGATTCACAATCTTAACT 57.228 30.769 18.77 8.31 45.48 2.24
76 77 9.476202 CCTATCATGTTACGATTCACAATCTTA 57.524 33.333 0.00 0.00 35.73 2.10
77 78 7.442364 CCCTATCATGTTACGATTCACAATCTT 59.558 37.037 0.00 0.00 35.73 2.40
78 79 6.931281 CCCTATCATGTTACGATTCACAATCT 59.069 38.462 0.00 0.00 35.73 2.40
79 80 6.706270 ACCCTATCATGTTACGATTCACAATC 59.294 38.462 0.00 0.00 34.52 2.67
80 81 6.591935 ACCCTATCATGTTACGATTCACAAT 58.408 36.000 0.00 0.00 0.00 2.71
81 82 5.984725 ACCCTATCATGTTACGATTCACAA 58.015 37.500 0.00 0.00 0.00 3.33
82 83 5.607939 ACCCTATCATGTTACGATTCACA 57.392 39.130 0.00 0.00 0.00 3.58
83 84 6.018994 GTGAACCCTATCATGTTACGATTCAC 60.019 42.308 12.99 12.99 0.00 3.18
84 85 6.046593 GTGAACCCTATCATGTTACGATTCA 58.953 40.000 0.00 0.00 0.00 2.57
85 86 6.018994 GTGTGAACCCTATCATGTTACGATTC 60.019 42.308 0.00 0.00 0.00 2.52
86 87 5.815740 GTGTGAACCCTATCATGTTACGATT 59.184 40.000 0.00 0.00 0.00 3.34
87 88 5.105106 TGTGTGAACCCTATCATGTTACGAT 60.105 40.000 0.00 0.00 0.00 3.73
88 89 4.221041 TGTGTGAACCCTATCATGTTACGA 59.779 41.667 0.00 0.00 0.00 3.43
89 90 4.328983 GTGTGTGAACCCTATCATGTTACG 59.671 45.833 0.00 0.00 0.00 3.18
90 91 5.121768 GTGTGTGTGAACCCTATCATGTTAC 59.878 44.000 0.00 0.00 0.00 2.50
91 92 5.221742 TGTGTGTGTGAACCCTATCATGTTA 60.222 40.000 0.00 0.00 0.00 2.41
92 93 4.072131 GTGTGTGTGAACCCTATCATGTT 58.928 43.478 0.00 0.00 0.00 2.71
93 94 3.072330 TGTGTGTGTGAACCCTATCATGT 59.928 43.478 0.00 0.00 0.00 3.21
94 95 3.436704 GTGTGTGTGTGAACCCTATCATG 59.563 47.826 0.00 0.00 0.00 3.07
95 96 3.072330 TGTGTGTGTGTGAACCCTATCAT 59.928 43.478 0.00 0.00 0.00 2.45
96 97 2.436173 TGTGTGTGTGTGAACCCTATCA 59.564 45.455 0.00 0.00 0.00 2.15
97 98 2.806244 GTGTGTGTGTGTGAACCCTATC 59.194 50.000 0.00 0.00 0.00 2.08
98 99 2.171659 TGTGTGTGTGTGTGAACCCTAT 59.828 45.455 0.00 0.00 0.00 2.57
99 100 1.555533 TGTGTGTGTGTGTGAACCCTA 59.444 47.619 0.00 0.00 0.00 3.53
100 101 0.326595 TGTGTGTGTGTGTGAACCCT 59.673 50.000 0.00 0.00 0.00 4.34
101 102 0.450184 GTGTGTGTGTGTGTGAACCC 59.550 55.000 0.00 0.00 0.00 4.11
102 103 0.450184 GGTGTGTGTGTGTGTGAACC 59.550 55.000 0.00 0.00 0.00 3.62
103 104 0.450184 GGGTGTGTGTGTGTGTGAAC 59.550 55.000 0.00 0.00 0.00 3.18
104 105 0.678366 GGGGTGTGTGTGTGTGTGAA 60.678 55.000 0.00 0.00 0.00 3.18
105 106 1.078072 GGGGTGTGTGTGTGTGTGA 60.078 57.895 0.00 0.00 0.00 3.58
106 107 0.962855 TTGGGGTGTGTGTGTGTGTG 60.963 55.000 0.00 0.00 0.00 3.82
107 108 0.033601 ATTGGGGTGTGTGTGTGTGT 60.034 50.000 0.00 0.00 0.00 3.72
108 109 1.606668 GTATTGGGGTGTGTGTGTGTG 59.393 52.381 0.00 0.00 0.00 3.82
109 110 1.812324 CGTATTGGGGTGTGTGTGTGT 60.812 52.381 0.00 0.00 0.00 3.72
110 111 0.871722 CGTATTGGGGTGTGTGTGTG 59.128 55.000 0.00 0.00 0.00 3.82
111 112 0.759959 TCGTATTGGGGTGTGTGTGT 59.240 50.000 0.00 0.00 0.00 3.72
112 113 1.270625 ACTCGTATTGGGGTGTGTGTG 60.271 52.381 0.00 0.00 0.00 3.82
113 114 1.053424 ACTCGTATTGGGGTGTGTGT 58.947 50.000 0.00 0.00 0.00 3.72
114 115 2.178912 AACTCGTATTGGGGTGTGTG 57.821 50.000 0.00 0.00 0.00 3.82
115 116 2.235402 CCTAACTCGTATTGGGGTGTGT 59.765 50.000 0.00 0.00 0.00 3.72
116 117 2.419574 CCCTAACTCGTATTGGGGTGTG 60.420 54.545 12.58 0.00 43.69 3.82
117 118 1.835531 CCCTAACTCGTATTGGGGTGT 59.164 52.381 12.58 0.00 43.69 4.16
118 119 2.614829 CCCTAACTCGTATTGGGGTG 57.385 55.000 12.58 0.00 43.69 4.61
121 122 2.681344 GCAAACCCTAACTCGTATTGGG 59.319 50.000 0.00 0.00 43.26 4.12
122 123 2.681344 GGCAAACCCTAACTCGTATTGG 59.319 50.000 0.00 0.00 0.00 3.16
123 124 3.606687 AGGCAAACCCTAACTCGTATTG 58.393 45.455 0.00 0.00 44.08 1.90
124 125 3.262405 TGAGGCAAACCCTAACTCGTATT 59.738 43.478 0.00 0.00 46.60 1.89
125 126 2.835764 TGAGGCAAACCCTAACTCGTAT 59.164 45.455 0.00 0.00 46.60 3.06
126 127 2.250031 TGAGGCAAACCCTAACTCGTA 58.750 47.619 0.00 0.00 46.60 3.43
127 128 1.053424 TGAGGCAAACCCTAACTCGT 58.947 50.000 0.00 0.00 46.60 4.18
128 129 2.093447 AGATGAGGCAAACCCTAACTCG 60.093 50.000 0.00 0.00 46.60 4.18
129 130 3.055094 TGAGATGAGGCAAACCCTAACTC 60.055 47.826 0.00 0.00 46.60 3.01
130 131 2.912956 TGAGATGAGGCAAACCCTAACT 59.087 45.455 0.00 0.00 46.60 2.24
131 132 3.010420 GTGAGATGAGGCAAACCCTAAC 58.990 50.000 0.00 0.00 46.60 2.34
132 133 2.912956 AGTGAGATGAGGCAAACCCTAA 59.087 45.455 0.00 0.00 46.60 2.69
133 134 2.551270 AGTGAGATGAGGCAAACCCTA 58.449 47.619 0.00 0.00 46.60 3.53
135 136 2.237392 AGTAGTGAGATGAGGCAAACCC 59.763 50.000 0.00 0.00 36.11 4.11
136 137 3.618690 AGTAGTGAGATGAGGCAAACC 57.381 47.619 0.00 0.00 0.00 3.27
137 138 4.319177 ACAAGTAGTGAGATGAGGCAAAC 58.681 43.478 0.00 0.00 0.00 2.93
138 139 4.623932 ACAAGTAGTGAGATGAGGCAAA 57.376 40.909 0.00 0.00 0.00 3.68
152 153 8.948145 AGTAGACTACTATGACAACACAAGTAG 58.052 37.037 13.63 14.44 43.72 2.57
153 154 8.859236 AGTAGACTACTATGACAACACAAGTA 57.141 34.615 13.63 0.00 37.23 2.24
154 155 7.762588 AGTAGACTACTATGACAACACAAGT 57.237 36.000 13.63 0.00 37.23 3.16
155 156 8.297426 TGAAGTAGACTACTATGACAACACAAG 58.703 37.037 15.51 0.00 38.26 3.16
156 157 8.173542 TGAAGTAGACTACTATGACAACACAA 57.826 34.615 15.51 0.00 38.26 3.33
157 158 7.754851 TGAAGTAGACTACTATGACAACACA 57.245 36.000 15.51 3.41 38.26 3.72
158 159 9.640963 AAATGAAGTAGACTACTATGACAACAC 57.359 33.333 15.51 1.23 38.26 3.32
166 167 9.331282 GGCATTCAAAATGAAGTAGACTACTAT 57.669 33.333 15.51 3.96 40.05 2.12
167 168 8.318412 TGGCATTCAAAATGAAGTAGACTACTA 58.682 33.333 15.51 1.55 40.05 1.82
168 169 7.168219 TGGCATTCAAAATGAAGTAGACTACT 58.832 34.615 9.45 9.45 40.05 2.57
169 170 7.377766 TGGCATTCAAAATGAAGTAGACTAC 57.622 36.000 4.32 4.32 40.05 2.73
170 171 6.094048 GCTGGCATTCAAAATGAAGTAGACTA 59.906 38.462 3.91 0.00 40.05 2.59
171 172 5.105997 GCTGGCATTCAAAATGAAGTAGACT 60.106 40.000 3.91 0.00 40.05 3.24
172 173 5.098211 GCTGGCATTCAAAATGAAGTAGAC 58.902 41.667 3.91 0.00 40.05 2.59
173 174 4.766373 TGCTGGCATTCAAAATGAAGTAGA 59.234 37.500 3.91 0.00 40.05 2.59
174 175 5.063180 TGCTGGCATTCAAAATGAAGTAG 57.937 39.130 3.91 0.00 40.05 2.57
175 176 5.412640 CATGCTGGCATTCAAAATGAAGTA 58.587 37.500 5.23 1.17 40.05 2.24
176 177 4.250464 CATGCTGGCATTCAAAATGAAGT 58.750 39.130 5.23 0.00 40.05 3.01
177 178 3.063452 GCATGCTGGCATTCAAAATGAAG 59.937 43.478 11.37 2.13 40.05 3.02
178 179 3.004171 GCATGCTGGCATTCAAAATGAA 58.996 40.909 11.37 0.00 41.09 2.57
179 180 2.028020 TGCATGCTGGCATTCAAAATGA 60.028 40.909 20.33 0.00 39.25 2.57
180 181 2.095213 GTGCATGCTGGCATTCAAAATG 59.905 45.455 20.33 0.00 46.92 2.32
181 182 2.352388 GTGCATGCTGGCATTCAAAAT 58.648 42.857 20.33 0.00 46.92 1.82
182 183 1.608542 GGTGCATGCTGGCATTCAAAA 60.609 47.619 20.33 0.00 46.92 2.44
183 184 0.037139 GGTGCATGCTGGCATTCAAA 60.037 50.000 20.33 0.00 46.92 2.69
184 185 1.592743 GGTGCATGCTGGCATTCAA 59.407 52.632 20.33 0.00 46.92 2.69
185 186 2.702788 CGGTGCATGCTGGCATTCA 61.703 57.895 20.33 4.57 46.92 2.57
186 187 2.103538 CGGTGCATGCTGGCATTC 59.896 61.111 20.33 1.74 46.92 2.67
187 188 3.454573 CCGGTGCATGCTGGCATT 61.455 61.111 20.33 0.00 46.92 3.56
198 199 0.749454 AGAATCTGGATTGCCGGTGC 60.749 55.000 1.90 0.00 41.60 5.01
199 200 2.620251 TAGAATCTGGATTGCCGGTG 57.380 50.000 1.90 0.00 41.60 4.94
200 201 3.744660 GAATAGAATCTGGATTGCCGGT 58.255 45.455 1.90 0.00 41.60 5.28
201 202 2.738846 CGAATAGAATCTGGATTGCCGG 59.261 50.000 0.00 0.00 42.30 6.13
202 203 2.738846 CCGAATAGAATCTGGATTGCCG 59.261 50.000 0.17 0.00 36.79 5.69
203 204 2.485814 GCCGAATAGAATCTGGATTGCC 59.514 50.000 0.17 0.00 0.00 4.52
204 205 2.158449 CGCCGAATAGAATCTGGATTGC 59.842 50.000 0.17 0.00 0.00 3.56
205 206 2.158449 GCGCCGAATAGAATCTGGATTG 59.842 50.000 0.00 0.00 0.00 2.67
206 207 2.417719 GCGCCGAATAGAATCTGGATT 58.582 47.619 0.00 0.00 0.00 3.01
207 208 1.338200 GGCGCCGAATAGAATCTGGAT 60.338 52.381 12.58 0.00 0.00 3.41
208 209 0.033504 GGCGCCGAATAGAATCTGGA 59.966 55.000 12.58 0.00 0.00 3.86
209 210 0.034059 AGGCGCCGAATAGAATCTGG 59.966 55.000 23.20 0.00 0.00 3.86
210 211 1.871080 AAGGCGCCGAATAGAATCTG 58.129 50.000 23.20 0.00 0.00 2.90
211 212 3.746045 TTAAGGCGCCGAATAGAATCT 57.254 42.857 23.20 0.00 0.00 2.40
212 213 3.362693 CGTTTAAGGCGCCGAATAGAATC 60.363 47.826 23.20 8.14 0.00 2.52
213 214 2.542595 CGTTTAAGGCGCCGAATAGAAT 59.457 45.455 23.20 0.00 0.00 2.40
214 215 1.928503 CGTTTAAGGCGCCGAATAGAA 59.071 47.619 23.20 8.65 0.00 2.10
215 216 1.135024 ACGTTTAAGGCGCCGAATAGA 60.135 47.619 23.20 8.41 0.00 1.98
216 217 1.257155 GACGTTTAAGGCGCCGAATAG 59.743 52.381 23.20 17.02 0.00 1.73
217 218 1.280066 GACGTTTAAGGCGCCGAATA 58.720 50.000 23.20 13.23 0.00 1.75
218 219 0.671163 TGACGTTTAAGGCGCCGAAT 60.671 50.000 23.20 14.36 0.00 3.34
219 220 0.671163 ATGACGTTTAAGGCGCCGAA 60.671 50.000 23.20 17.05 0.00 4.30
220 221 0.671163 AATGACGTTTAAGGCGCCGA 60.671 50.000 23.20 10.93 0.00 5.54
221 222 0.167251 AAATGACGTTTAAGGCGCCG 59.833 50.000 23.20 10.68 0.00 6.46
222 223 2.160022 TGTAAATGACGTTTAAGGCGCC 59.840 45.455 21.89 21.89 34.23 6.53
223 224 3.458779 TGTAAATGACGTTTAAGGCGC 57.541 42.857 0.00 0.00 34.23 6.53
224 225 6.340537 AGTATGTAAATGACGTTTAAGGCG 57.659 37.500 1.38 0.87 34.23 5.52
235 236 9.537192 CCGGTTGACTAAATAGTATGTAAATGA 57.463 33.333 0.00 0.00 36.50 2.57
236 237 9.321562 ACCGGTTGACTAAATAGTATGTAAATG 57.678 33.333 0.00 0.00 36.50 2.32
237 238 9.321562 CACCGGTTGACTAAATAGTATGTAAAT 57.678 33.333 2.97 0.00 36.50 1.40
238 239 7.278424 GCACCGGTTGACTAAATAGTATGTAAA 59.722 37.037 2.97 0.00 36.50 2.01
239 240 6.757947 GCACCGGTTGACTAAATAGTATGTAA 59.242 38.462 2.97 0.00 36.50 2.41
240 241 6.127394 TGCACCGGTTGACTAAATAGTATGTA 60.127 38.462 2.97 0.00 36.50 2.29
241 242 5.114081 GCACCGGTTGACTAAATAGTATGT 58.886 41.667 2.97 0.00 36.50 2.29
242 243 5.006358 GTGCACCGGTTGACTAAATAGTATG 59.994 44.000 2.97 0.00 36.50 2.39
243 244 5.114081 GTGCACCGGTTGACTAAATAGTAT 58.886 41.667 2.97 0.00 36.50 2.12
244 245 4.021280 TGTGCACCGGTTGACTAAATAGTA 60.021 41.667 15.69 0.00 36.50 1.82
245 246 3.244284 TGTGCACCGGTTGACTAAATAGT 60.244 43.478 15.69 0.00 39.71 2.12
246 247 3.124636 GTGTGCACCGGTTGACTAAATAG 59.875 47.826 15.69 0.00 0.00 1.73
247 248 3.068560 GTGTGCACCGGTTGACTAAATA 58.931 45.455 15.69 0.00 0.00 1.40
248 249 1.877443 GTGTGCACCGGTTGACTAAAT 59.123 47.619 15.69 0.00 0.00 1.40
249 250 1.301423 GTGTGCACCGGTTGACTAAA 58.699 50.000 15.69 0.00 0.00 1.85
250 251 0.533308 GGTGTGCACCGGTTGACTAA 60.533 55.000 15.69 0.00 42.29 2.24
251 252 1.070105 GGTGTGCACCGGTTGACTA 59.930 57.895 15.69 0.00 42.29 2.59
252 253 2.203153 GGTGTGCACCGGTTGACT 60.203 61.111 15.69 0.00 42.29 3.41
261 262 4.035102 GAGGGAGGGGGTGTGCAC 62.035 72.222 10.75 10.75 0.00 4.57
262 263 4.270153 AGAGGGAGGGGGTGTGCA 62.270 66.667 0.00 0.00 0.00 4.57
263 264 3.721706 CAGAGGGAGGGGGTGTGC 61.722 72.222 0.00 0.00 0.00 4.57
264 265 3.011517 CCAGAGGGAGGGGGTGTG 61.012 72.222 0.00 0.00 35.59 3.82
281 282 2.757056 GCGTGTAAATGGGTCGGCC 61.757 63.158 0.00 0.00 0.00 6.13
282 283 1.743995 AGCGTGTAAATGGGTCGGC 60.744 57.895 0.00 0.00 0.00 5.54
283 284 0.672401 ACAGCGTGTAAATGGGTCGG 60.672 55.000 0.00 0.00 0.00 4.79
284 285 1.153353 AACAGCGTGTAAATGGGTCG 58.847 50.000 0.00 0.00 0.00 4.79
285 286 2.095415 GGAAACAGCGTGTAAATGGGTC 60.095 50.000 0.00 0.00 0.00 4.46
286 287 1.883926 GGAAACAGCGTGTAAATGGGT 59.116 47.619 0.00 0.00 0.00 4.51
287 288 1.135803 CGGAAACAGCGTGTAAATGGG 60.136 52.381 0.00 0.00 0.00 4.00
288 289 1.801771 TCGGAAACAGCGTGTAAATGG 59.198 47.619 0.00 0.00 0.00 3.16
289 290 2.734606 TCTCGGAAACAGCGTGTAAATG 59.265 45.455 0.00 0.00 0.00 2.32
290 291 2.993899 CTCTCGGAAACAGCGTGTAAAT 59.006 45.455 0.00 0.00 0.00 1.40
291 292 2.400399 CTCTCGGAAACAGCGTGTAAA 58.600 47.619 0.00 0.00 0.00 2.01
292 293 1.336517 CCTCTCGGAAACAGCGTGTAA 60.337 52.381 0.00 0.00 0.00 2.41
293 294 0.242825 CCTCTCGGAAACAGCGTGTA 59.757 55.000 0.00 0.00 0.00 2.90
294 295 1.006102 CCTCTCGGAAACAGCGTGT 60.006 57.895 0.00 0.00 0.00 4.49
295 296 2.383527 GCCTCTCGGAAACAGCGTG 61.384 63.158 0.00 0.00 0.00 5.34
296 297 2.048127 GCCTCTCGGAAACAGCGT 60.048 61.111 0.00 0.00 0.00 5.07
297 298 2.048222 TGCCTCTCGGAAACAGCG 60.048 61.111 0.00 0.00 0.00 5.18
298 299 1.294659 CTGTGCCTCTCGGAAACAGC 61.295 60.000 0.00 0.00 38.71 4.40
299 300 1.294659 GCTGTGCCTCTCGGAAACAG 61.295 60.000 9.13 9.13 43.77 3.16
300 301 1.301716 GCTGTGCCTCTCGGAAACA 60.302 57.895 0.00 0.00 0.00 2.83
301 302 1.004440 AGCTGTGCCTCTCGGAAAC 60.004 57.895 0.00 0.00 0.00 2.78
302 303 1.004560 CAGCTGTGCCTCTCGGAAA 60.005 57.895 5.25 0.00 0.00 3.13
303 304 2.210013 ACAGCTGTGCCTCTCGGAA 61.210 57.895 20.97 0.00 0.00 4.30
304 305 2.601666 ACAGCTGTGCCTCTCGGA 60.602 61.111 20.97 0.00 0.00 4.55
305 306 2.433838 CACAGCTGTGCCTCTCGG 60.434 66.667 32.39 8.06 39.39 4.63
306 307 1.735920 GTCACAGCTGTGCCTCTCG 60.736 63.158 36.76 16.05 45.25 4.04
307 308 0.389687 GAGTCACAGCTGTGCCTCTC 60.390 60.000 37.88 33.68 44.81 3.20
308 309 1.670590 GAGTCACAGCTGTGCCTCT 59.329 57.895 37.88 31.83 44.81 3.69
309 310 4.275524 GAGTCACAGCTGTGCCTC 57.724 61.111 34.34 34.34 42.61 4.70
310 311 1.670590 GAGAGTCACAGCTGTGCCT 59.329 57.895 36.76 33.18 45.25 4.75
311 312 1.735920 CGAGAGTCACAGCTGTGCC 60.736 63.158 36.76 29.06 45.25 5.01
312 313 2.378858 GCGAGAGTCACAGCTGTGC 61.379 63.158 36.76 30.09 45.25 4.57
313 314 2.085262 CGCGAGAGTCACAGCTGTG 61.085 63.158 36.07 36.07 46.91 3.66
314 315 1.796190 TTCGCGAGAGTCACAGCTGT 61.796 55.000 15.25 15.25 43.69 4.40
315 316 0.664466 TTTCGCGAGAGTCACAGCTG 60.664 55.000 13.48 13.48 43.69 4.24
316 317 0.387878 CTTTCGCGAGAGTCACAGCT 60.388 55.000 17.92 0.00 43.69 4.24
317 318 1.950098 GCTTTCGCGAGAGTCACAGC 61.950 60.000 25.34 13.76 43.69 4.40
318 319 0.664466 TGCTTTCGCGAGAGTCACAG 60.664 55.000 25.34 8.49 43.69 3.66
319 320 0.939577 GTGCTTTCGCGAGAGTCACA 60.940 55.000 30.42 19.25 43.69 3.58
320 321 0.939577 TGTGCTTTCGCGAGAGTCAC 60.940 55.000 29.56 29.56 43.69 3.67
321 322 0.249280 TTGTGCTTTCGCGAGAGTCA 60.249 50.000 25.34 20.22 43.69 3.41
322 323 1.059835 GATTGTGCTTTCGCGAGAGTC 59.940 52.381 25.34 18.16 43.69 3.36
323 324 1.071605 GATTGTGCTTTCGCGAGAGT 58.928 50.000 25.34 7.43 43.69 3.24
324 325 0.024238 CGATTGTGCTTTCGCGAGAG 59.976 55.000 21.42 21.42 43.69 3.20
325 326 0.666274 ACGATTGTGCTTTCGCGAGA 60.666 50.000 9.59 3.35 38.91 4.04
326 327 0.517132 CACGATTGTGCTTTCGCGAG 60.517 55.000 9.59 0.00 39.67 5.03
327 328 1.491127 CACGATTGTGCTTTCGCGA 59.509 52.632 3.71 3.71 39.67 5.87
328 329 4.026156 CACGATTGTGCTTTCGCG 57.974 55.556 0.00 0.00 39.67 5.87
337 338 1.686355 TCCACAAAAGGCACGATTGT 58.314 45.000 0.00 0.00 41.26 2.71
338 339 2.664916 CTTCCACAAAAGGCACGATTG 58.335 47.619 0.00 0.00 35.49 2.67
339 340 1.000274 GCTTCCACAAAAGGCACGATT 60.000 47.619 0.00 0.00 0.00 3.34
340 341 0.598065 GCTTCCACAAAAGGCACGAT 59.402 50.000 0.00 0.00 0.00 3.73
341 342 0.749818 TGCTTCCACAAAAGGCACGA 60.750 50.000 0.00 0.00 0.00 4.35
342 343 0.102120 TTGCTTCCACAAAAGGCACG 59.898 50.000 0.00 0.00 0.00 5.34
343 344 2.307934 TTTGCTTCCACAAAAGGCAC 57.692 45.000 0.00 0.00 36.62 5.01
344 345 2.235898 AGTTTTGCTTCCACAAAAGGCA 59.764 40.909 2.86 0.00 46.95 4.75
345 346 2.609002 CAGTTTTGCTTCCACAAAAGGC 59.391 45.455 2.86 0.00 46.95 4.35
346 347 3.618150 CACAGTTTTGCTTCCACAAAAGG 59.382 43.478 2.86 2.28 46.95 3.11
347 348 4.327087 GTCACAGTTTTGCTTCCACAAAAG 59.673 41.667 2.86 0.00 46.95 2.27
348 349 4.021544 AGTCACAGTTTTGCTTCCACAAAA 60.022 37.500 0.00 0.00 44.90 2.44
349 350 3.509575 AGTCACAGTTTTGCTTCCACAAA 59.490 39.130 0.00 0.00 37.74 2.83
350 351 3.088532 AGTCACAGTTTTGCTTCCACAA 58.911 40.909 0.00 0.00 0.00 3.33
351 352 2.682856 GAGTCACAGTTTTGCTTCCACA 59.317 45.455 0.00 0.00 0.00 4.17
352 353 2.945668 AGAGTCACAGTTTTGCTTCCAC 59.054 45.455 0.00 0.00 0.00 4.02
353 354 3.206150 GAGAGTCACAGTTTTGCTTCCA 58.794 45.455 0.00 0.00 0.00 3.53
354 355 2.221981 CGAGAGTCACAGTTTTGCTTCC 59.778 50.000 0.00 0.00 0.00 3.46
355 356 2.866762 ACGAGAGTCACAGTTTTGCTTC 59.133 45.455 0.00 0.00 44.19 3.86
356 357 2.906354 ACGAGAGTCACAGTTTTGCTT 58.094 42.857 0.00 0.00 44.19 3.91
357 358 2.604046 ACGAGAGTCACAGTTTTGCT 57.396 45.000 0.00 0.00 44.19 3.91
405 406 1.572941 GGTCGTGCCTTTCGGAAAC 59.427 57.895 0.00 0.00 0.00 2.78
406 407 1.957186 CGGTCGTGCCTTTCGGAAA 60.957 57.895 2.78 2.78 34.25 3.13
407 408 2.356553 CGGTCGTGCCTTTCGGAA 60.357 61.111 0.00 0.00 34.25 4.30
408 409 3.608662 ACGGTCGTGCCTTTCGGA 61.609 61.111 0.00 0.00 34.25 4.55
409 410 3.411351 CACGGTCGTGCCTTTCGG 61.411 66.667 10.59 0.00 39.39 4.30
410 411 2.355363 TCACGGTCGTGCCTTTCG 60.355 61.111 17.46 0.00 45.04 3.46
411 412 1.282930 GAGTCACGGTCGTGCCTTTC 61.283 60.000 17.46 8.91 45.04 2.62
412 413 1.300697 GAGTCACGGTCGTGCCTTT 60.301 57.895 17.46 4.09 45.04 3.11
413 414 2.143594 GAGAGTCACGGTCGTGCCTT 62.144 60.000 17.46 6.33 45.04 4.35
414 415 2.597805 AGAGTCACGGTCGTGCCT 60.598 61.111 17.46 12.44 45.04 4.75
415 416 2.126424 GAGAGTCACGGTCGTGCC 60.126 66.667 17.46 7.52 45.04 5.01
416 417 2.502080 CGAGAGTCACGGTCGTGC 60.502 66.667 17.46 12.68 45.04 5.34
417 418 2.944429 ACGAGAGTCACGGTCGTG 59.056 61.111 16.33 16.33 44.89 4.35
427 428 6.591441 GCACGATTTTGCTTTCACGAGAGT 62.591 45.833 0.00 0.00 42.15 3.24
428 429 3.473367 CACGATTTTGCTTTCACGAGAG 58.527 45.455 0.00 0.00 0.00 3.20
429 430 2.349438 GCACGATTTTGCTTTCACGAGA 60.349 45.455 0.00 0.00 39.59 4.04
430 431 1.971962 GCACGATTTTGCTTTCACGAG 59.028 47.619 0.00 0.00 39.59 4.18
431 432 1.334599 GGCACGATTTTGCTTTCACGA 60.335 47.619 0.00 0.00 42.56 4.35
432 433 1.052287 GGCACGATTTTGCTTTCACG 58.948 50.000 0.00 0.00 42.56 4.35
433 434 1.418373 GGGCACGATTTTGCTTTCAC 58.582 50.000 0.00 0.00 42.56 3.18
434 435 0.316841 GGGGCACGATTTTGCTTTCA 59.683 50.000 0.00 0.00 42.56 2.69
435 436 0.603065 AGGGGCACGATTTTGCTTTC 59.397 50.000 0.00 0.00 42.56 2.62
436 437 0.603065 GAGGGGCACGATTTTGCTTT 59.397 50.000 0.00 0.00 42.56 3.51
437 438 1.586154 CGAGGGGCACGATTTTGCTT 61.586 55.000 0.00 0.00 42.56 3.91
438 439 2.040544 CGAGGGGCACGATTTTGCT 61.041 57.895 0.00 0.00 42.56 3.91
439 440 2.332654 ACGAGGGGCACGATTTTGC 61.333 57.895 0.00 0.00 42.18 3.68
440 441 1.501741 CACGAGGGGCACGATTTTG 59.498 57.895 0.00 0.00 34.70 2.44
441 442 1.674322 CCACGAGGGGCACGATTTT 60.674 57.895 0.00 0.00 34.70 1.82
442 443 2.046314 CCACGAGGGGCACGATTT 60.046 61.111 0.00 0.00 34.70 2.17
443 444 2.521958 CTTCCACGAGGGGCACGATT 62.522 60.000 0.00 0.00 37.22 3.34
444 445 3.000819 TTCCACGAGGGGCACGAT 61.001 61.111 0.00 0.00 37.22 3.73
445 446 3.691342 CTTCCACGAGGGGCACGA 61.691 66.667 0.00 0.00 37.22 4.35
446 447 2.725203 TTTCTTCCACGAGGGGCACG 62.725 60.000 0.00 0.00 37.22 5.34
447 448 0.536460 TTTTCTTCCACGAGGGGCAC 60.536 55.000 0.00 0.00 37.22 5.01
448 449 0.183971 TTTTTCTTCCACGAGGGGCA 59.816 50.000 0.00 0.00 37.22 5.36
449 450 0.596577 GTTTTTCTTCCACGAGGGGC 59.403 55.000 0.00 0.00 37.22 5.80
450 451 1.244816 GGTTTTTCTTCCACGAGGGG 58.755 55.000 0.00 0.00 37.22 4.79
451 452 0.872388 CGGTTTTTCTTCCACGAGGG 59.128 55.000 0.00 0.00 34.83 4.30
452 453 1.263217 CACGGTTTTTCTTCCACGAGG 59.737 52.381 0.00 0.00 0.00 4.63
453 454 2.033151 GTCACGGTTTTTCTTCCACGAG 60.033 50.000 0.00 0.00 0.00 4.18
454 455 1.935199 GTCACGGTTTTTCTTCCACGA 59.065 47.619 0.00 0.00 0.00 4.35
455 456 1.937899 AGTCACGGTTTTTCTTCCACG 59.062 47.619 0.00 0.00 0.00 4.94
456 457 3.203716 AGAGTCACGGTTTTTCTTCCAC 58.796 45.455 0.00 0.00 0.00 4.02
457 458 3.463944 GAGAGTCACGGTTTTTCTTCCA 58.536 45.455 0.00 0.00 0.00 3.53
458 459 2.475487 CGAGAGTCACGGTTTTTCTTCC 59.525 50.000 1.62 0.00 0.00 3.46
459 460 2.096860 GCGAGAGTCACGGTTTTTCTTC 60.097 50.000 11.95 0.00 0.00 2.87
460 461 1.865340 GCGAGAGTCACGGTTTTTCTT 59.135 47.619 11.95 0.00 0.00 2.52
461 462 1.499049 GCGAGAGTCACGGTTTTTCT 58.501 50.000 11.95 0.00 0.00 2.52
462 463 0.161024 CGCGAGAGTCACGGTTTTTC 59.839 55.000 11.95 0.00 0.00 2.29
463 464 0.249155 TCGCGAGAGTCACGGTTTTT 60.249 50.000 3.71 0.00 34.84 1.94
464 465 0.249155 TTCGCGAGAGTCACGGTTTT 60.249 50.000 9.59 0.00 43.69 2.43
465 466 0.249155 TTTCGCGAGAGTCACGGTTT 60.249 50.000 9.59 0.00 43.69 3.27
466 467 0.663568 CTTTCGCGAGAGTCACGGTT 60.664 55.000 17.92 0.00 43.69 4.44
467 468 1.081376 CTTTCGCGAGAGTCACGGT 60.081 57.895 17.92 0.00 43.69 4.83
468 469 0.386858 TTCTTTCGCGAGAGTCACGG 60.387 55.000 24.05 0.86 43.69 4.94
469 470 1.405461 TTTCTTTCGCGAGAGTCACG 58.595 50.000 24.05 5.53 43.69 4.35
470 471 3.489785 TCTTTTTCTTTCGCGAGAGTCAC 59.510 43.478 24.05 0.00 43.69 3.67
471 472 3.713288 TCTTTTTCTTTCGCGAGAGTCA 58.287 40.909 24.05 11.16 43.69 3.41
472 473 4.710528 TTCTTTTTCTTTCGCGAGAGTC 57.289 40.909 24.05 0.00 43.69 3.36
473 474 5.479716 TTTTCTTTTTCTTTCGCGAGAGT 57.520 34.783 24.05 0.00 43.69 3.24
531 532 6.970613 GTCTTTCTTAGCTTTTCGACCAAAAA 59.029 34.615 0.00 0.00 33.40 1.94
532 533 6.459161 GGTCTTTCTTAGCTTTTCGACCAAAA 60.459 38.462 0.00 0.00 39.47 2.44
533 534 5.008316 GGTCTTTCTTAGCTTTTCGACCAAA 59.992 40.000 0.00 0.00 39.47 3.28
534 535 4.514066 GGTCTTTCTTAGCTTTTCGACCAA 59.486 41.667 0.00 0.00 39.47 3.67
535 536 4.062991 GGTCTTTCTTAGCTTTTCGACCA 58.937 43.478 0.00 0.00 39.47 4.02
536 537 3.123116 CGGTCTTTCTTAGCTTTTCGACC 59.877 47.826 0.00 0.35 37.05 4.79
537 538 3.123116 CCGGTCTTTCTTAGCTTTTCGAC 59.877 47.826 0.00 0.00 0.00 4.20
538 539 3.243975 ACCGGTCTTTCTTAGCTTTTCGA 60.244 43.478 0.00 0.00 0.00 3.71
539 540 3.064931 ACCGGTCTTTCTTAGCTTTTCG 58.935 45.455 0.00 0.00 0.00 3.46
540 541 4.062991 TCACCGGTCTTTCTTAGCTTTTC 58.937 43.478 2.59 0.00 0.00 2.29
541 542 4.081322 TCACCGGTCTTTCTTAGCTTTT 57.919 40.909 2.59 0.00 0.00 2.27
542 543 3.764237 TCACCGGTCTTTCTTAGCTTT 57.236 42.857 2.59 0.00 0.00 3.51
543 544 3.764237 TTCACCGGTCTTTCTTAGCTT 57.236 42.857 2.59 0.00 0.00 3.74
544 545 3.764237 TTTCACCGGTCTTTCTTAGCT 57.236 42.857 2.59 0.00 0.00 3.32
545 546 4.823790 TTTTTCACCGGTCTTTCTTAGC 57.176 40.909 2.59 0.00 0.00 3.09
582 583 9.414295 GCTATTTAAACGGTTATTTTTCAGGTT 57.586 29.630 0.00 0.00 0.00 3.50
583 584 8.030692 GGCTATTTAAACGGTTATTTTTCAGGT 58.969 33.333 0.00 0.00 0.00 4.00
584 585 7.219344 CGGCTATTTAAACGGTTATTTTTCAGG 59.781 37.037 0.00 0.00 0.00 3.86
585 586 7.964011 TCGGCTATTTAAACGGTTATTTTTCAG 59.036 33.333 0.00 0.00 0.00 3.02
586 587 7.814642 TCGGCTATTTAAACGGTTATTTTTCA 58.185 30.769 0.00 0.00 0.00 2.69
587 588 8.672214 TTCGGCTATTTAAACGGTTATTTTTC 57.328 30.769 0.00 0.00 0.00 2.29
588 589 9.473640 TTTTCGGCTATTTAAACGGTTATTTTT 57.526 25.926 0.00 0.00 0.00 1.94
589 590 8.914654 GTTTTCGGCTATTTAAACGGTTATTTT 58.085 29.630 0.00 0.00 0.00 1.82
590 591 7.271008 CGTTTTCGGCTATTTAAACGGTTATTT 59.729 33.333 10.17 0.00 45.26 1.40
591 592 6.742264 CGTTTTCGGCTATTTAAACGGTTATT 59.258 34.615 10.17 0.00 45.26 1.40
592 593 6.250089 CGTTTTCGGCTATTTAAACGGTTAT 58.750 36.000 10.17 0.00 45.26 1.89
593 594 5.616658 CGTTTTCGGCTATTTAAACGGTTA 58.383 37.500 10.17 0.00 45.26 2.85
594 595 4.465921 CGTTTTCGGCTATTTAAACGGTT 58.534 39.130 10.17 0.00 45.26 4.44
595 596 4.069289 CGTTTTCGGCTATTTAAACGGT 57.931 40.909 10.17 0.00 45.26 4.83
598 599 3.296169 CACGCGTTTTCGGCTATTTAAAC 59.704 43.478 10.22 0.00 44.29 2.01
599 600 3.480894 CACGCGTTTTCGGCTATTTAAA 58.519 40.909 10.22 0.00 44.29 1.52
600 601 2.725452 GCACGCGTTTTCGGCTATTTAA 60.725 45.455 10.22 0.00 44.29 1.52
601 602 1.201943 GCACGCGTTTTCGGCTATTTA 60.202 47.619 10.22 0.00 44.29 1.40
602 603 0.453782 GCACGCGTTTTCGGCTATTT 60.454 50.000 10.22 0.00 44.29 1.40
603 604 1.133869 GCACGCGTTTTCGGCTATT 59.866 52.632 10.22 0.00 44.29 1.73
604 605 2.782615 GCACGCGTTTTCGGCTAT 59.217 55.556 10.22 0.00 44.29 2.97
605 606 3.769358 CGCACGCGTTTTCGGCTA 61.769 61.111 10.22 0.00 44.29 3.93
608 609 2.968330 TTTTCCGCACGCGTTTTCGG 62.968 55.000 28.08 28.08 44.29 4.30
610 611 1.125270 ATTTTTCCGCACGCGTTTTC 58.875 45.000 10.22 0.04 37.81 2.29
611 612 2.402640 TATTTTTCCGCACGCGTTTT 57.597 40.000 10.22 0.00 37.81 2.43
612 613 2.402640 TTATTTTTCCGCACGCGTTT 57.597 40.000 10.22 0.00 37.81 3.60
613 614 2.402640 TTTATTTTTCCGCACGCGTT 57.597 40.000 10.22 0.00 37.81 4.84
614 615 2.402640 TTTTATTTTTCCGCACGCGT 57.597 40.000 5.58 5.58 37.81 6.01
633 634 1.177401 GGCGCTCCTTCTGGATTTTT 58.823 50.000 7.64 0.00 42.29 1.94
634 635 0.329596 AGGCGCTCCTTCTGGATTTT 59.670 50.000 7.64 0.00 40.66 1.82
635 636 1.139853 CTAGGCGCTCCTTCTGGATTT 59.860 52.381 7.64 0.00 40.66 2.17
636 637 0.755686 CTAGGCGCTCCTTCTGGATT 59.244 55.000 7.64 0.00 40.66 3.01
637 638 0.105964 TCTAGGCGCTCCTTCTGGAT 60.106 55.000 7.64 0.00 40.66 3.41
638 639 0.753479 CTCTAGGCGCTCCTTCTGGA 60.753 60.000 7.64 1.54 40.66 3.86
639 640 1.040339 ACTCTAGGCGCTCCTTCTGG 61.040 60.000 7.64 0.00 40.66 3.86
640 641 0.102120 CACTCTAGGCGCTCCTTCTG 59.898 60.000 7.64 0.00 40.66 3.02
641 642 1.671901 GCACTCTAGGCGCTCCTTCT 61.672 60.000 7.64 0.00 40.66 2.85
642 643 1.227118 GCACTCTAGGCGCTCCTTC 60.227 63.158 7.64 0.00 40.66 3.46
643 644 2.896443 GCACTCTAGGCGCTCCTT 59.104 61.111 7.64 0.00 40.66 3.36
650 651 1.801913 CACGTGTCGCACTCTAGGC 60.802 63.158 7.58 0.00 31.34 3.93
651 652 1.154016 CCACGTGTCGCACTCTAGG 60.154 63.158 15.65 0.00 31.34 3.02
652 653 1.801913 GCCACGTGTCGCACTCTAG 60.802 63.158 15.65 0.00 31.34 2.43
653 654 2.077821 TTGCCACGTGTCGCACTCTA 62.078 55.000 17.47 2.40 33.97 2.43
654 655 2.916502 TTTGCCACGTGTCGCACTCT 62.917 55.000 17.47 0.00 33.97 3.24
655 656 1.841663 ATTTGCCACGTGTCGCACTC 61.842 55.000 17.47 0.00 33.97 3.51
656 657 1.891919 ATTTGCCACGTGTCGCACT 60.892 52.632 17.47 7.02 33.97 4.40
657 658 1.725625 CATTTGCCACGTGTCGCAC 60.726 57.895 17.47 1.49 33.97 5.34
658 659 2.636462 CATTTGCCACGTGTCGCA 59.364 55.556 15.65 14.96 0.00 5.10
659 660 2.126888 CCATTTGCCACGTGTCGC 60.127 61.111 15.65 12.30 0.00 5.19
660 661 2.126888 GCCATTTGCCACGTGTCG 60.127 61.111 15.65 0.51 0.00 4.35
661 662 1.081242 CAGCCATTTGCCACGTGTC 60.081 57.895 15.65 0.98 42.71 3.67
662 663 1.518056 CTCAGCCATTTGCCACGTGT 61.518 55.000 15.65 0.00 42.71 4.49
663 664 1.210931 CTCAGCCATTTGCCACGTG 59.789 57.895 9.08 9.08 42.71 4.49
664 665 0.957395 CTCTCAGCCATTTGCCACGT 60.957 55.000 0.00 0.00 42.71 4.49
665 666 1.798735 CTCTCAGCCATTTGCCACG 59.201 57.895 0.00 0.00 42.71 4.94
666 667 1.509923 GCTCTCAGCCATTTGCCAC 59.490 57.895 0.00 0.00 42.71 5.01
667 668 2.042259 CGCTCTCAGCCATTTGCCA 61.042 57.895 0.00 0.00 42.71 4.92
668 669 2.796651 CGCTCTCAGCCATTTGCC 59.203 61.111 0.00 0.00 42.71 4.52
669 670 2.101770 GCGCTCTCAGCCATTTGC 59.898 61.111 0.00 0.00 38.18 3.68
670 671 2.402388 CGCGCTCTCAGCCATTTG 59.598 61.111 5.56 0.00 38.18 2.32
671 672 3.503363 GCGCGCTCTCAGCCATTT 61.503 61.111 26.67 0.00 38.18 2.32
677 678 3.485431 CACTTGGCGCGCTCTCAG 61.485 66.667 32.29 21.96 0.00 3.35
688 689 2.034879 AACGATCAGCGCCACTTGG 61.035 57.895 2.29 0.00 46.04 3.61
689 690 1.133253 CAACGATCAGCGCCACTTG 59.867 57.895 2.29 0.00 46.04 3.16
690 691 2.680913 GCAACGATCAGCGCCACTT 61.681 57.895 2.29 0.00 46.04 3.16
691 692 3.121030 GCAACGATCAGCGCCACT 61.121 61.111 2.29 0.00 46.04 4.00
697 698 3.088500 GAGCCACGCAACGATCAGC 62.089 63.158 0.00 0.00 0.00 4.26
698 699 2.456119 GGAGCCACGCAACGATCAG 61.456 63.158 0.00 0.00 0.00 2.90
699 700 2.434185 GGAGCCACGCAACGATCA 60.434 61.111 0.00 0.00 0.00 2.92
700 701 3.195698 GGGAGCCACGCAACGATC 61.196 66.667 0.00 0.00 0.00 3.69
701 702 3.545124 TTGGGAGCCACGCAACGAT 62.545 57.895 6.84 0.00 44.40 3.73
702 703 4.243008 TTGGGAGCCACGCAACGA 62.243 61.111 6.84 0.00 44.40 3.85
705 706 2.597217 CCTTTGGGAGCCACGCAA 60.597 61.111 6.84 6.84 46.82 4.85
706 707 3.126703 TTCCTTTGGGAGCCACGCA 62.127 57.895 0.00 0.00 43.29 5.24
707 708 2.282180 TTCCTTTGGGAGCCACGC 60.282 61.111 0.00 0.00 43.29 5.34
708 709 2.325082 CGTTCCTTTGGGAGCCACG 61.325 63.158 0.00 0.00 43.29 4.94
709 710 2.626780 GCGTTCCTTTGGGAGCCAC 61.627 63.158 0.00 0.00 43.29 5.01
710 711 2.282180 GCGTTCCTTTGGGAGCCA 60.282 61.111 0.00 0.00 43.29 4.75
711 712 2.034221 AGCGTTCCTTTGGGAGCC 59.966 61.111 0.00 0.00 43.29 4.70
712 713 2.391389 CGAGCGTTCCTTTGGGAGC 61.391 63.158 0.00 0.00 43.29 4.70
713 714 0.602905 AACGAGCGTTCCTTTGGGAG 60.603 55.000 1.93 0.00 43.29 4.30
714 715 0.680618 TAACGAGCGTTCCTTTGGGA 59.319 50.000 11.89 0.00 39.31 4.37
715 716 1.196127 GTTAACGAGCGTTCCTTTGGG 59.804 52.381 11.89 0.00 39.31 4.12
716 717 1.196127 GGTTAACGAGCGTTCCTTTGG 59.804 52.381 11.89 0.00 39.31 3.28
717 718 1.868498 TGGTTAACGAGCGTTCCTTTG 59.132 47.619 11.89 0.00 39.31 2.77
718 719 2.140717 CTGGTTAACGAGCGTTCCTTT 58.859 47.619 11.89 0.00 39.31 3.11
719 720 1.069668 ACTGGTTAACGAGCGTTCCTT 59.930 47.619 16.60 0.00 39.31 3.36
720 721 0.677842 ACTGGTTAACGAGCGTTCCT 59.322 50.000 16.60 0.00 39.31 3.36
721 722 0.788391 CACTGGTTAACGAGCGTTCC 59.212 55.000 16.60 8.82 39.31 3.62
722 723 0.788391 CCACTGGTTAACGAGCGTTC 59.212 55.000 16.60 0.00 39.31 3.95
723 724 1.226030 GCCACTGGTTAACGAGCGTT 61.226 55.000 16.60 13.11 41.65 4.84
724 725 1.666872 GCCACTGGTTAACGAGCGT 60.667 57.895 16.60 0.00 0.00 5.07
725 726 1.352156 GAGCCACTGGTTAACGAGCG 61.352 60.000 16.60 7.99 0.00 5.03
726 727 1.019805 GGAGCCACTGGTTAACGAGC 61.020 60.000 16.60 5.03 0.00 5.03
727 728 0.391263 GGGAGCCACTGGTTAACGAG 60.391 60.000 15.27 15.27 0.00 4.18
728 729 1.675219 GGGAGCCACTGGTTAACGA 59.325 57.895 0.00 0.00 0.00 3.85
729 730 1.740296 CGGGAGCCACTGGTTAACG 60.740 63.158 0.00 0.00 0.00 3.18
730 731 0.672711 GTCGGGAGCCACTGGTTAAC 60.673 60.000 0.00 0.00 0.00 2.01
731 732 1.122632 TGTCGGGAGCCACTGGTTAA 61.123 55.000 0.00 0.00 0.00 2.01
732 733 1.534476 TGTCGGGAGCCACTGGTTA 60.534 57.895 0.00 0.00 0.00 2.85
733 734 2.847234 TGTCGGGAGCCACTGGTT 60.847 61.111 0.00 0.00 0.00 3.67
734 735 3.314331 CTGTCGGGAGCCACTGGT 61.314 66.667 0.00 0.00 0.00 4.00
735 736 4.767255 GCTGTCGGGAGCCACTGG 62.767 72.222 0.00 0.00 32.35 4.00
736 737 3.947132 CTGCTGTCGGGAGCCACTG 62.947 68.421 4.42 0.00 38.28 3.66
737 738 3.699894 CTGCTGTCGGGAGCCACT 61.700 66.667 4.42 0.00 38.28 4.00
738 739 4.767255 CCTGCTGTCGGGAGCCAC 62.767 72.222 4.42 0.00 41.45 5.01
740 741 4.459089 GACCTGCTGTCGGGAGCC 62.459 72.222 4.42 0.00 41.45 4.70
795 796 0.179067 TAGCGGGCCGATTACAAAGG 60.179 55.000 33.44 0.00 0.00 3.11
798 799 2.011222 CTTTTAGCGGGCCGATTACAA 58.989 47.619 33.44 18.01 0.00 2.41
811 812 3.551796 GCCTATTGCCGCTTTTAGC 57.448 52.632 0.00 0.00 38.02 3.09
852 853 0.608640 AAGCAAGACGTGGACCTAGG 59.391 55.000 7.41 7.41 0.00 3.02
918 919 2.371259 GGAGGGAAGGGGAGACTGC 61.371 68.421 0.00 0.00 0.00 4.40
1092 1105 1.279238 GATCTCCTCGTCGGCGTAC 59.721 63.158 10.18 2.92 39.49 3.67
1386 1399 1.920610 ACTTGGCGTACTGGTAGAGT 58.079 50.000 0.00 0.00 38.88 3.24
1518 1531 3.379240 CCAGTTCTGCATCAGTATCTCG 58.621 50.000 0.00 0.00 32.61 4.04
1638 1651 0.035725 TGAAGAGGCTCCAGTGCATG 60.036 55.000 11.71 0.00 34.04 4.06
1782 1795 3.438434 GCATGTTCCTTCTCCTCTTGTTC 59.562 47.826 0.00 0.00 0.00 3.18
1866 1879 2.171448 GACATACAGGCACTCCAGGAAT 59.829 50.000 0.00 0.00 34.60 3.01
1920 1933 1.520600 TAACCTGCTCGCACTCGACA 61.521 55.000 0.00 0.00 40.21 4.35
1962 1975 1.444553 CCTCTCTTCGACGCGCTTT 60.445 57.895 5.73 0.00 0.00 3.51
2070 2083 1.065491 TCCGCAAGCACACCAATATCT 60.065 47.619 0.00 0.00 0.00 1.98
2175 2188 1.627864 TGATGAGAGTTCCCGTCACA 58.372 50.000 0.00 0.00 0.00 3.58
2206 2219 2.038820 TCTGCTCATGGACATCAACACA 59.961 45.455 0.00 0.00 0.00 3.72
2283 2296 2.276409 GCATGCCCTGGATCCACA 59.724 61.111 11.44 8.30 0.00 4.17
2397 2410 7.028962 GCAATGTGATTCAAATACTAGCAACA 58.971 34.615 0.00 0.00 0.00 3.33
2444 2457 5.473504 TGAGGAAAAGGAGTACAAAGCATTC 59.526 40.000 0.00 0.00 0.00 2.67
2464 2477 9.542462 TTAATTCATAGGACGATAAACTTGAGG 57.458 33.333 0.00 0.00 0.00 3.86
2539 2553 4.335594 ACAAGCCAAGACAGACAGTAAAAC 59.664 41.667 0.00 0.00 0.00 2.43
2555 2569 2.502142 AGATGATTGCAGACAAGCCA 57.498 45.000 0.00 0.00 41.57 4.75
2570 2584 4.389382 CAGACAACAGAGAGCTCAAAGATG 59.611 45.833 17.77 11.44 0.00 2.90
2571 2585 4.567971 CAGACAACAGAGAGCTCAAAGAT 58.432 43.478 17.77 0.00 0.00 2.40
2583 2597 0.610174 CAGGCTAGGCAGACAACAGA 59.390 55.000 19.70 0.00 28.86 3.41
2594 2608 7.892609 ACCTTAAAAATGTTTAACAGGCTAGG 58.107 34.615 3.63 7.80 34.87 3.02
2616 2638 6.183360 ACACTTACGGACTTAACTGTAAACCT 60.183 38.462 0.00 0.00 39.89 3.50
2688 2710 4.678742 GCTTCAAATCAAGAGAAACTGTGC 59.321 41.667 0.00 0.00 0.00 4.57
2694 2716 7.322664 AGTTGTTTGCTTCAAATCAAGAGAAA 58.677 30.769 0.00 0.00 35.74 2.52
2701 2723 6.061441 TCTCCTAGTTGTTTGCTTCAAATCA 58.939 36.000 0.00 0.00 35.74 2.57
2739 2762 8.603898 TTAGAGATTCCACTACAAACTATGGA 57.396 34.615 0.00 0.00 39.50 3.41
2744 2767 8.423906 TCTCTTTAGAGATTCCACTACAAACT 57.576 34.615 5.36 0.00 45.48 2.66
2764 2787 8.885346 CCCTCCATTCCTAAATATAAGTCTCTT 58.115 37.037 0.00 0.00 0.00 2.85
2765 2788 8.242325 TCCCTCCATTCCTAAATATAAGTCTCT 58.758 37.037 0.00 0.00 0.00 3.10
2766 2789 8.437274 TCCCTCCATTCCTAAATATAAGTCTC 57.563 38.462 0.00 0.00 0.00 3.36
2767 2790 8.019652 ACTCCCTCCATTCCTAAATATAAGTCT 58.980 37.037 0.00 0.00 0.00 3.24
2768 2791 8.208575 ACTCCCTCCATTCCTAAATATAAGTC 57.791 38.462 0.00 0.00 0.00 3.01
2769 2792 9.327731 CTACTCCCTCCATTCCTAAATATAAGT 57.672 37.037 0.00 0.00 0.00 2.24
2771 2794 9.684702 AACTACTCCCTCCATTCCTAAATATAA 57.315 33.333 0.00 0.00 0.00 0.98
2773 2796 9.860393 ATAACTACTCCCTCCATTCCTAAATAT 57.140 33.333 0.00 0.00 0.00 1.28
2774 2797 9.684702 AATAACTACTCCCTCCATTCCTAAATA 57.315 33.333 0.00 0.00 0.00 1.40
2775 2798 8.582891 AATAACTACTCCCTCCATTCCTAAAT 57.417 34.615 0.00 0.00 0.00 1.40
2776 2799 8.931568 GTAATAACTACTCCCTCCATTCCTAAA 58.068 37.037 0.00 0.00 0.00 1.85
2777 2800 8.069356 TGTAATAACTACTCCCTCCATTCCTAA 58.931 37.037 0.00 0.00 0.00 2.69
2778 2801 7.598248 TGTAATAACTACTCCCTCCATTCCTA 58.402 38.462 0.00 0.00 0.00 2.94
2779 2802 6.449956 TGTAATAACTACTCCCTCCATTCCT 58.550 40.000 0.00 0.00 0.00 3.36
2780 2803 6.742559 TGTAATAACTACTCCCTCCATTCC 57.257 41.667 0.00 0.00 0.00 3.01
2784 2807 9.275572 AGTTATTTGTAATAACTACTCCCTCCA 57.724 33.333 18.38 0.00 41.49 3.86
2823 2846 5.437289 TGTGCCTTGTAATTGCTATATGC 57.563 39.130 0.00 0.00 43.25 3.14
2824 2847 8.446273 GTCTATGTGCCTTGTAATTGCTATATG 58.554 37.037 0.00 0.00 0.00 1.78
2825 2848 7.331934 CGTCTATGTGCCTTGTAATTGCTATAT 59.668 37.037 0.00 0.00 0.00 0.86
2826 2849 6.645003 CGTCTATGTGCCTTGTAATTGCTATA 59.355 38.462 0.00 0.00 0.00 1.31
2852 2875 2.632544 GCATTGTGCAGCTGGAGCA 61.633 57.895 17.12 10.92 44.26 4.26
2853 2876 2.181021 GCATTGTGCAGCTGGAGC 59.819 61.111 17.12 8.74 44.26 4.70
2870 2893 4.703575 ACAGAATTTGACTCCACCATGATG 59.296 41.667 0.00 0.00 0.00 3.07
2893 2916 7.716799 ATTATGAATGCCTCCAAACACTAAA 57.283 32.000 0.00 0.00 0.00 1.85
2897 2920 5.922544 GCATATTATGAATGCCTCCAAACAC 59.077 40.000 7.87 0.00 43.17 3.32
2934 2957 3.452474 CGCAAACTTGGTTCCATCAAAA 58.548 40.909 0.00 0.00 0.00 2.44
2944 2967 1.334960 CGATTTCAGCGCAAACTTGGT 60.335 47.619 11.47 0.00 0.00 3.67
3004 3027 0.652592 CACATACAGCGCTACAAGCC 59.347 55.000 10.99 0.00 38.18 4.35
3005 3028 1.061131 CACACATACAGCGCTACAAGC 59.939 52.381 10.99 0.00 38.02 4.01
3006 3029 2.337583 ACACACATACAGCGCTACAAG 58.662 47.619 10.99 0.00 0.00 3.16
3007 3030 2.333926 GACACACATACAGCGCTACAA 58.666 47.619 10.99 0.00 0.00 2.41
3013 3036 1.067565 ACTCAGGACACACATACAGCG 60.068 52.381 0.00 0.00 0.00 5.18
3049 3072 3.197983 AGATAATTGCTACGGATAGGCCC 59.802 47.826 0.00 0.00 0.00 5.80
3050 3073 4.473477 AGATAATTGCTACGGATAGGCC 57.527 45.455 0.00 0.00 0.00 5.19
3051 3074 5.360144 TCCTAGATAATTGCTACGGATAGGC 59.640 44.000 0.00 0.00 0.00 3.93
3058 3097 8.391106 GCCAAATAATCCTAGATAATTGCTACG 58.609 37.037 0.00 0.00 0.00 3.51
3067 3106 7.038088 TGCTGATGAGCCAAATAATCCTAGATA 60.038 37.037 0.38 0.00 45.57 1.98
3076 3115 3.018856 CCAGTGCTGATGAGCCAAATAA 58.981 45.455 0.38 0.00 45.57 1.40
3089 3128 1.672356 GTGTGTAGCCCCAGTGCTG 60.672 63.158 0.00 0.00 42.77 4.41
3095 3134 0.774276 TCAAATGGTGTGTAGCCCCA 59.226 50.000 0.00 0.00 0.00 4.96
3103 3142 3.314080 ACAACGGTAGTTCAAATGGTGTG 59.686 43.478 0.00 0.00 38.79 3.82
3104 3143 3.547746 ACAACGGTAGTTCAAATGGTGT 58.452 40.909 0.00 0.00 38.79 4.16
3119 3158 7.977853 AGTAGTAACTTATACATGGAACAACGG 59.022 37.037 0.00 0.00 34.65 4.44
3120 3159 8.804743 CAGTAGTAACTTATACATGGAACAACG 58.195 37.037 0.00 0.00 35.94 4.10
3121 3160 9.095065 CCAGTAGTAACTTATACATGGAACAAC 57.905 37.037 0.00 0.00 35.94 3.32
3122 3161 9.038072 TCCAGTAGTAACTTATACATGGAACAA 57.962 33.333 0.00 0.00 35.94 2.83
3123 3162 8.598202 TCCAGTAGTAACTTATACATGGAACA 57.402 34.615 0.00 0.00 36.72 3.18
3156 3197 5.357032 AGTTAAGTATGTGCCCTGTAATTGC 59.643 40.000 0.00 0.00 0.00 3.56
3174 3215 2.435805 TGATAGGGCAGCCAGAGTTAAG 59.564 50.000 15.19 0.00 0.00 1.85
3175 3216 2.477245 TGATAGGGCAGCCAGAGTTAA 58.523 47.619 15.19 0.00 0.00 2.01
3202 3244 6.215845 ACCACTAATCAAAATTTGACTGCAC 58.784 36.000 10.91 0.00 43.48 4.57
3240 3282 7.930325 TGAATGCATCCAAACACTAATCAAAAA 59.070 29.630 0.00 0.00 0.00 1.94
3241 3283 7.440198 TGAATGCATCCAAACACTAATCAAAA 58.560 30.769 0.00 0.00 0.00 2.44
3242 3284 6.990798 TGAATGCATCCAAACACTAATCAAA 58.009 32.000 0.00 0.00 0.00 2.69
3243 3285 6.587206 TGAATGCATCCAAACACTAATCAA 57.413 33.333 0.00 0.00 0.00 2.57
3244 3286 6.778834 ATGAATGCATCCAAACACTAATCA 57.221 33.333 0.00 0.00 0.00 2.57
3245 3287 8.190122 TGTTATGAATGCATCCAAACACTAATC 58.810 33.333 0.00 0.00 35.94 1.75
3246 3288 7.975616 GTGTTATGAATGCATCCAAACACTAAT 59.024 33.333 23.56 2.66 43.00 1.73
3247 3289 7.312154 GTGTTATGAATGCATCCAAACACTAA 58.688 34.615 23.56 4.90 43.00 2.24
3248 3290 6.403092 CGTGTTATGAATGCATCCAAACACTA 60.403 38.462 25.67 2.09 43.53 2.74
3249 3291 5.619757 CGTGTTATGAATGCATCCAAACACT 60.620 40.000 25.67 2.89 43.53 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.