Multiple sequence alignment - TraesCS5A01G260600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G260600 chr5A 100.000 5259 0 0 1 5259 474545822 474540564 0.000000e+00 9712.0
1 TraesCS5A01G260600 chr5A 90.446 314 27 3 1533 1846 518787389 518787079 1.360000e-110 411.0
2 TraesCS5A01G260600 chr5A 90.127 314 28 3 1533 1846 557963004 557963314 6.340000e-109 405.0
3 TraesCS5A01G260600 chr5A 90.588 170 8 3 4564 4726 427870348 427870180 8.870000e-53 219.0
4 TraesCS5A01G260600 chr5A 92.593 108 3 3 5027 5130 427869810 427869704 3.280000e-32 150.0
5 TraesCS5A01G260600 chr5A 95.312 64 2 1 4869 4932 427869873 427869811 3.350000e-17 100.0
6 TraesCS5A01G260600 chr5D 91.149 4621 219 93 5 4534 371473606 371469085 0.000000e+00 6093.0
7 TraesCS5A01G260600 chr5D 98.413 126 1 1 5130 5255 371468501 371468377 2.470000e-53 220.0
8 TraesCS5A01G260600 chr5D 87.234 188 22 1 2545 2732 426866990 426866805 4.130000e-51 213.0
9 TraesCS5A01G260600 chr5D 92.523 107 5 1 5027 5130 371468638 371468532 3.280000e-32 150.0
10 TraesCS5A01G260600 chr5D 96.875 64 2 0 4869 4932 371468702 371468639 2.000000e-19 108.0
11 TraesCS5A01G260600 chr5B 91.724 4060 191 52 527 4510 441453257 441449267 0.000000e+00 5502.0
12 TraesCS5A01G260600 chr5B 83.838 297 31 3 3882 4177 460967176 460967456 3.120000e-67 267.0
13 TraesCS5A01G260600 chr7A 91.101 1562 139 0 2701 4262 217557424 217555863 0.000000e+00 2115.0
14 TraesCS5A01G260600 chr7A 90.446 314 27 3 1533 1846 707174880 707175190 1.360000e-110 411.0
15 TraesCS5A01G260600 chr7A 94.521 146 8 0 998 1143 217559630 217559485 5.300000e-55 226.0
16 TraesCS5A01G260600 chr7B 90.909 1562 142 0 2701 4262 196907159 196908720 0.000000e+00 2098.0
17 TraesCS5A01G260600 chr7B 87.833 263 25 6 1250 1510 452911910 452912167 8.560000e-78 302.0
18 TraesCS5A01G260600 chr7B 92.025 163 8 4 991 1151 196904982 196905141 1.910000e-54 224.0
19 TraesCS5A01G260600 chr7D 90.717 1562 145 0 2701 4262 205543968 205542407 0.000000e+00 2082.0
20 TraesCS5A01G260600 chr7D 91.477 176 9 6 980 1151 205546373 205546200 2.450000e-58 237.0
21 TraesCS5A01G260600 chr7D 75.410 244 29 19 1974 2198 321515751 321515520 7.250000e-14 89.8
22 TraesCS5A01G260600 chr2A 81.894 1563 265 12 2712 4260 15003425 15001867 0.000000e+00 1303.0
23 TraesCS5A01G260600 chr2A 91.209 182 16 0 1326 1507 748030428 748030609 1.130000e-61 248.0
24 TraesCS5A01G260600 chr2A 92.562 121 9 0 1009 1129 15004451 15004331 1.950000e-39 174.0
25 TraesCS5A01G260600 chr2A 85.350 157 23 0 2576 2732 209936721 209936877 4.210000e-36 163.0
26 TraesCS5A01G260600 chr2B 81.422 1561 269 16 2712 4257 23582327 23580773 0.000000e+00 1256.0
27 TraesCS5A01G260600 chr2B 94.444 126 7 0 1004 1129 23583211 23583086 1.490000e-45 195.0
28 TraesCS5A01G260600 chr2D 81.110 1567 273 12 2712 4260 12884297 12882736 0.000000e+00 1232.0
29 TraesCS5A01G260600 chr2D 93.651 126 8 0 1004 1129 12885201 12885076 6.950000e-44 189.0
30 TraesCS5A01G260600 chr2D 74.286 245 32 23 1974 2199 374549233 374549001 2.030000e-09 75.0
31 TraesCS5A01G260600 chr6B 91.401 314 24 3 1533 1846 647771803 647772113 1.350000e-115 427.0
32 TraesCS5A01G260600 chr6B 86.631 187 22 2 2547 2732 616723361 616723545 2.480000e-48 204.0
33 TraesCS5A01G260600 chr3A 90.764 314 26 3 1533 1846 92258164 92257854 2.930000e-112 416.0
34 TraesCS5A01G260600 chr3A 90.446 314 27 3 1533 1846 642859616 642859926 1.360000e-110 411.0
35 TraesCS5A01G260600 chr1A 90.764 314 26 3 1533 1846 270717886 270717576 2.930000e-112 416.0
36 TraesCS5A01G260600 chr1A 92.391 184 14 0 1327 1510 536835713 536835530 4.040000e-66 263.0
37 TraesCS5A01G260600 chr1A 94.118 102 5 1 5134 5235 47805088 47804988 2.540000e-33 154.0
38 TraesCS5A01G260600 chr1A 95.652 92 2 2 4927 5018 94788756 94788667 4.240000e-31 147.0
39 TraesCS5A01G260600 chr1A 95.652 92 2 2 4927 5018 238114389 238114300 4.240000e-31 147.0
40 TraesCS5A01G260600 chr6D 89.231 260 20 5 1253 1510 133887922 133887669 8.500000e-83 318.0
41 TraesCS5A01G260600 chr6D 87.879 264 24 5 1249 1509 133660895 133660637 2.380000e-78 303.0
42 TraesCS5A01G260600 chr6D 92.913 127 8 1 1003 1129 21352765 21352890 3.230000e-42 183.0
43 TraesCS5A01G260600 chr3D 91.803 183 15 0 1326 1508 30773181 30773363 6.760000e-64 255.0
44 TraesCS5A01G260600 chr3D 86.082 194 25 1 2539 2732 164647558 164647749 1.920000e-49 207.0
45 TraesCS5A01G260600 chr3D 85.714 84 5 5 2388 2464 484481530 484481613 1.210000e-11 82.4
46 TraesCS5A01G260600 chr1B 90.110 182 18 0 1326 1507 293810816 293810997 2.450000e-58 237.0
47 TraesCS5A01G260600 chr1B 95.652 92 2 2 4927 5018 135121426 135121515 4.240000e-31 147.0
48 TraesCS5A01G260600 chr1B 92.647 68 4 1 4865 4932 67539911 67539845 4.330000e-16 97.1
49 TraesCS5A01G260600 chr1B 94.231 52 2 1 5133 5184 67539694 67539644 1.570000e-10 78.7
50 TraesCS5A01G260600 chr1D 94.898 98 4 1 5133 5230 47878707 47878611 9.120000e-33 152.0
51 TraesCS5A01G260600 chrUn 95.652 92 2 2 4927 5018 260198296 260198385 4.240000e-31 147.0
52 TraesCS5A01G260600 chrUn 95.652 92 2 2 4927 5018 393426240 393426329 4.240000e-31 147.0
53 TraesCS5A01G260600 chrUn 95.652 92 2 2 4927 5018 446319699 446319610 4.240000e-31 147.0
54 TraesCS5A01G260600 chrUn 95.652 92 2 2 4927 5018 446445187 446445098 4.240000e-31 147.0
55 TraesCS5A01G260600 chrUn 75.102 245 30 19 1974 2199 275300964 275300732 9.380000e-13 86.1
56 TraesCS5A01G260600 chr6A 95.652 92 2 2 4927 5018 84439597 84439508 4.240000e-31 147.0
57 TraesCS5A01G260600 chr6A 95.652 92 2 2 4927 5018 608877788 608877877 4.240000e-31 147.0
58 TraesCS5A01G260600 chr4D 72.727 517 53 47 1974 2464 409950345 409949891 5.610000e-15 93.5
59 TraesCS5A01G260600 chr4B 76.836 177 19 16 2041 2199 420605046 420604874 4.370000e-11 80.5
60 TraesCS5A01G260600 chr3B 76.571 175 23 14 2041 2199 779584940 779584768 4.370000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G260600 chr5A 474540564 474545822 5258 True 9712.00 9712 100.0000 1 5259 1 chr5A.!!$R1 5258
1 TraesCS5A01G260600 chr5D 371468377 371473606 5229 True 1642.75 6093 94.7400 5 5255 4 chr5D.!!$R2 5250
2 TraesCS5A01G260600 chr5B 441449267 441453257 3990 True 5502.00 5502 91.7240 527 4510 1 chr5B.!!$R1 3983
3 TraesCS5A01G260600 chr7A 217555863 217559630 3767 True 1170.50 2115 92.8110 998 4262 2 chr7A.!!$R1 3264
4 TraesCS5A01G260600 chr7B 196904982 196908720 3738 False 1161.00 2098 91.4670 991 4262 2 chr7B.!!$F2 3271
5 TraesCS5A01G260600 chr7D 205542407 205546373 3966 True 1159.50 2082 91.0970 980 4262 2 chr7D.!!$R2 3282
6 TraesCS5A01G260600 chr2A 15001867 15004451 2584 True 738.50 1303 87.2280 1009 4260 2 chr2A.!!$R1 3251
7 TraesCS5A01G260600 chr2B 23580773 23583211 2438 True 725.50 1256 87.9330 1004 4257 2 chr2B.!!$R1 3253
8 TraesCS5A01G260600 chr2D 12882736 12885201 2465 True 710.50 1232 87.3805 1004 4260 2 chr2D.!!$R2 3256

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
168 171 0.107897 TTGTGTGTTCTGCCACGACT 60.108 50.0 0.0 0.0 38.20 4.18 F
169 172 0.107897 TGTGTGTTCTGCCACGACTT 60.108 50.0 0.0 0.0 38.20 3.01 F
1585 2808 0.179004 TGATTGGGCAGTTCGGTGTT 60.179 50.0 0.0 0.0 0.00 3.32 F
3073 5055 0.036022 AGCACTTCTCTGTTGAGGGC 59.964 55.0 0.0 0.0 40.58 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2158 3889 0.324943 TAAGCAGTGAAGCCTCCCAC 59.675 55.000 0.0 0.0 34.23 4.61 R
2226 3962 9.638176 AAGCTGAGACAGGAATGATAAAATTAT 57.362 29.630 0.0 0.0 31.21 1.28 R
3280 5262 1.558756 AGGATCTTGTTCTGCTGGAGG 59.441 52.381 0.0 0.0 0.00 4.30 R
4871 7002 0.033504 GGAGTTCAAGCACCGTCAGA 59.966 55.000 0.0 0.0 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 8.301730 ACATTGAAAAATGTTGTCTATGCTTG 57.698 30.769 0.00 0.00 40.22 4.01
57 58 6.088016 TGAAAAATGTTGTCTATGCTTGCT 57.912 33.333 0.00 0.00 0.00 3.91
95 96 2.037902 TGCCATTTGTAGAAGTCGTGGA 59.962 45.455 0.00 0.00 0.00 4.02
99 100 5.506649 GCCATTTGTAGAAGTCGTGGAAAAA 60.507 40.000 0.00 0.00 0.00 1.94
153 156 5.929992 AGCATTTTGGAGTGATGATTTTGTG 59.070 36.000 0.00 0.00 0.00 3.33
155 158 6.347079 GCATTTTGGAGTGATGATTTTGTGTG 60.347 38.462 0.00 0.00 0.00 3.82
158 161 5.437289 TGGAGTGATGATTTTGTGTGTTC 57.563 39.130 0.00 0.00 0.00 3.18
159 162 5.132502 TGGAGTGATGATTTTGTGTGTTCT 58.867 37.500 0.00 0.00 0.00 3.01
160 163 5.008911 TGGAGTGATGATTTTGTGTGTTCTG 59.991 40.000 0.00 0.00 0.00 3.02
162 165 3.983344 GTGATGATTTTGTGTGTTCTGCC 59.017 43.478 0.00 0.00 0.00 4.85
163 166 3.635836 TGATGATTTTGTGTGTTCTGCCA 59.364 39.130 0.00 0.00 0.00 4.92
164 167 3.435105 TGATTTTGTGTGTTCTGCCAC 57.565 42.857 0.00 0.00 35.86 5.01
165 168 2.223456 TGATTTTGTGTGTTCTGCCACG 60.223 45.455 0.00 0.00 38.20 4.94
166 169 1.454201 TTTTGTGTGTTCTGCCACGA 58.546 45.000 0.00 0.00 38.20 4.35
167 170 0.730265 TTTGTGTGTTCTGCCACGAC 59.270 50.000 0.00 0.00 38.20 4.34
168 171 0.107897 TTGTGTGTTCTGCCACGACT 60.108 50.000 0.00 0.00 38.20 4.18
169 172 0.107897 TGTGTGTTCTGCCACGACTT 60.108 50.000 0.00 0.00 38.20 3.01
170 173 0.304705 GTGTGTTCTGCCACGACTTG 59.695 55.000 0.00 0.00 38.20 3.16
188 191 4.043750 ACTTGCACAAATGTCAATTCACG 58.956 39.130 0.00 0.00 0.00 4.35
199 202 9.179552 CAAATGTCAATTCACGATGAAACTTTA 57.820 29.630 0.00 0.00 40.12 1.85
203 206 7.642194 TGTCAATTCACGATGAAACTTTACAAC 59.358 33.333 0.00 0.00 40.12 3.32
217 220 8.419076 AAACTTTACAACCATTGACAACATTC 57.581 30.769 0.00 0.00 0.00 2.67
218 221 7.106439 ACTTTACAACCATTGACAACATTCA 57.894 32.000 0.00 0.00 0.00 2.57
220 223 7.652909 ACTTTACAACCATTGACAACATTCATG 59.347 33.333 0.00 0.00 0.00 3.07
221 224 5.787953 ACAACCATTGACAACATTCATGA 57.212 34.783 0.00 0.00 0.00 3.07
225 228 6.159299 ACCATTGACAACATTCATGACAAA 57.841 33.333 0.00 0.00 36.39 2.83
229 232 8.561212 CCATTGACAACATTCATGACAAATTTT 58.439 29.630 0.00 0.00 36.39 1.82
230 233 9.938670 CATTGACAACATTCATGACAAATTTTT 57.061 25.926 0.00 0.00 36.39 1.94
283 288 4.491676 TGACTTTACTGTTCATACGGAGC 58.508 43.478 0.00 0.00 34.59 4.70
287 292 5.105310 ACTTTACTGTTCATACGGAGCTCAT 60.105 40.000 17.19 5.44 34.59 2.90
288 293 3.895232 ACTGTTCATACGGAGCTCATT 57.105 42.857 17.19 3.60 34.59 2.57
301 306 2.670635 CTCATTTGAGCTCGGGACG 58.329 57.895 9.64 0.00 44.73 4.79
331 336 3.403038 ACTTTCGAGTGCAACATAGCTT 58.597 40.909 0.00 0.00 41.43 3.74
335 340 3.664107 TCGAGTGCAACATAGCTTTCTT 58.336 40.909 0.00 0.00 41.43 2.52
340 345 4.214971 AGTGCAACATAGCTTTCTTGACAG 59.785 41.667 0.00 0.00 41.43 3.51
360 365 1.605457 GCAAAGGGTTTAGCACAAGCC 60.605 52.381 7.82 7.82 43.59 4.35
363 368 0.409484 AGGGTTTAGCACAAGCCCAT 59.591 50.000 20.34 7.21 44.21 4.00
372 377 1.339055 GCACAAGCCCATGAGTAGTGA 60.339 52.381 0.00 0.00 33.58 3.41
374 379 2.941064 CACAAGCCCATGAGTAGTGATG 59.059 50.000 0.00 0.00 0.00 3.07
378 383 4.613925 AGCCCATGAGTAGTGATGTATG 57.386 45.455 0.00 0.00 0.00 2.39
385 390 7.933577 CCCATGAGTAGTGATGTATGTTGTATT 59.066 37.037 0.00 0.00 0.00 1.89
406 415 6.949352 ATTGTATATGCAAGAGGGTTTCAG 57.051 37.500 11.95 0.00 0.00 3.02
413 422 2.036346 GCAAGAGGGTTTCAGCATGTTT 59.964 45.455 0.00 0.00 37.40 2.83
414 423 3.858503 GCAAGAGGGTTTCAGCATGTTTC 60.859 47.826 0.00 0.00 37.40 2.78
422 431 5.462068 GGGTTTCAGCATGTTTCACTTAAAC 59.538 40.000 0.00 0.00 46.46 2.01
494 506 5.068067 AGCAACACTTTTACCGGTTGTTTAT 59.932 36.000 15.04 4.72 41.89 1.40
497 509 7.434602 GCAACACTTTTACCGGTTGTTTATAAA 59.565 33.333 15.04 1.55 41.89 1.40
525 539 6.418585 AAAGAGTAACGTAAGCTATTTGCC 57.581 37.500 0.00 0.00 44.23 4.52
584 598 5.895928 GAATTGTAATTCCTTTCCTCTGCC 58.104 41.667 6.14 0.00 39.04 4.85
594 608 1.827399 TTCCTCTGCCGAAGACACCC 61.827 60.000 0.00 0.00 0.00 4.61
602 618 1.165270 CCGAAGACACCCAATCAACC 58.835 55.000 0.00 0.00 0.00 3.77
639 655 1.430992 AACCCTCGTCTTTCCTTCCA 58.569 50.000 0.00 0.00 0.00 3.53
640 656 0.685660 ACCCTCGTCTTTCCTTCCAC 59.314 55.000 0.00 0.00 0.00 4.02
641 657 0.977395 CCCTCGTCTTTCCTTCCACT 59.023 55.000 0.00 0.00 0.00 4.00
642 658 1.066787 CCCTCGTCTTTCCTTCCACTC 60.067 57.143 0.00 0.00 0.00 3.51
643 659 1.896465 CCTCGTCTTTCCTTCCACTCT 59.104 52.381 0.00 0.00 0.00 3.24
644 660 2.300437 CCTCGTCTTTCCTTCCACTCTT 59.700 50.000 0.00 0.00 0.00 2.85
645 661 3.244249 CCTCGTCTTTCCTTCCACTCTTT 60.244 47.826 0.00 0.00 0.00 2.52
646 662 4.381411 CTCGTCTTTCCTTCCACTCTTTT 58.619 43.478 0.00 0.00 0.00 2.27
647 663 4.127171 TCGTCTTTCCTTCCACTCTTTTG 58.873 43.478 0.00 0.00 0.00 2.44
648 664 3.304057 CGTCTTTCCTTCCACTCTTTTGC 60.304 47.826 0.00 0.00 0.00 3.68
649 665 3.004839 GTCTTTCCTTCCACTCTTTTGCC 59.995 47.826 0.00 0.00 0.00 4.52
650 666 3.117512 TCTTTCCTTCCACTCTTTTGCCT 60.118 43.478 0.00 0.00 0.00 4.75
651 667 3.312736 TTCCTTCCACTCTTTTGCCTT 57.687 42.857 0.00 0.00 0.00 4.35
652 668 2.863809 TCCTTCCACTCTTTTGCCTTC 58.136 47.619 0.00 0.00 0.00 3.46
653 669 1.889170 CCTTCCACTCTTTTGCCTTCC 59.111 52.381 0.00 0.00 0.00 3.46
654 670 2.586425 CTTCCACTCTTTTGCCTTCCA 58.414 47.619 0.00 0.00 0.00 3.53
780 797 1.535462 CAAAACTCACCGCAACCCTAG 59.465 52.381 0.00 0.00 0.00 3.02
908 925 1.057851 TAAATAGGCTCCCACCCCCG 61.058 60.000 0.00 0.00 0.00 5.73
1161 1190 2.444140 ATCCCCTTCCCTCGTCCG 60.444 66.667 0.00 0.00 0.00 4.79
1184 1213 1.377229 TTTTTCCCCGTGATCCGCT 59.623 52.632 0.00 0.00 34.38 5.52
1222 1251 2.713967 GCATGGTGGATTTGCGGCT 61.714 57.895 0.00 0.00 0.00 5.52
1223 1252 1.140161 CATGGTGGATTTGCGGCTG 59.860 57.895 0.00 0.00 0.00 4.85
1238 1267 0.179081 GGCTGTCGCTAGGGTTTAGG 60.179 60.000 6.70 0.00 36.09 2.69
1241 1270 2.167075 GCTGTCGCTAGGGTTTAGGTTA 59.833 50.000 6.70 0.00 0.00 2.85
1437 2321 4.760047 CCCCGACAAGGCGACCAG 62.760 72.222 0.00 0.00 39.21 4.00
1585 2808 0.179004 TGATTGGGCAGTTCGGTGTT 60.179 50.000 0.00 0.00 0.00 3.32
1588 2811 2.983592 GGGCAGTTCGGTGTTGGG 60.984 66.667 0.00 0.00 0.00 4.12
1669 2892 0.539901 AGCAGTACGTGTGGGAGTCT 60.540 55.000 0.00 0.00 0.00 3.24
1813 3110 7.173218 TGTGATTGGTTTACTCTTCATGTCTTC 59.827 37.037 0.00 0.00 0.00 2.87
1841 3202 2.027100 GGTTCTGTGCTTAGGGTAGCTT 60.027 50.000 0.00 0.00 41.76 3.74
1854 3215 7.419403 GCTTAGGGTAGCTTTATTGGTAGGTTA 60.419 40.741 0.00 0.00 38.15 2.85
1923 3637 4.071423 TGTCTGCACTGCATAAGCTTAAA 58.929 39.130 10.85 0.00 42.74 1.52
1953 3667 8.894731 GTCAGTTCTGTGATCTACTTGTCTATA 58.105 37.037 0.00 0.00 0.00 1.31
2012 3733 4.209703 CCATGTGTTGATGTTTTGTGCTTC 59.790 41.667 0.00 0.00 0.00 3.86
2017 3738 5.348451 GTGTTGATGTTTTGTGCTTCAAACT 59.652 36.000 7.03 0.00 44.39 2.66
2020 3741 4.863689 TGATGTTTTGTGCTTCAAACTGTG 59.136 37.500 7.03 0.00 44.39 3.66
2101 3823 3.691118 GCATGAGATAAACTCTGTTGCCA 59.309 43.478 0.00 0.00 45.13 4.92
2104 3826 6.493116 CATGAGATAAACTCTGTTGCCAATC 58.507 40.000 0.00 0.00 45.13 2.67
2111 3833 1.816835 CTCTGTTGCCAATCAGCATGT 59.183 47.619 0.00 0.00 43.64 3.21
2116 3838 3.007074 TGTTGCCAATCAGCATGTTTGAT 59.993 39.130 8.49 8.49 46.06 2.57
2122 3844 5.475719 CCAATCAGCATGTTTGATTTGTCT 58.524 37.500 18.84 2.72 46.06 3.41
2123 3845 6.623486 CCAATCAGCATGTTTGATTTGTCTA 58.377 36.000 18.84 0.00 46.06 2.59
2154 3885 9.679661 TGATGGTAATGTGATTAGTTGTATGTT 57.320 29.630 0.00 0.00 0.00 2.71
2214 3950 7.390440 TGTTAGAATTGGGATAGTTCTGTGTTG 59.610 37.037 0.00 0.00 36.22 3.33
2226 3962 8.862325 ATAGTTCTGTGTTGATTTGATACCAA 57.138 30.769 0.00 0.00 0.00 3.67
2252 4206 7.951347 AATTTTATCATTCCTGTCTCAGCTT 57.049 32.000 0.00 0.00 0.00 3.74
2257 4211 3.817084 TCATTCCTGTCTCAGCTTGTTTG 59.183 43.478 0.00 0.00 0.00 2.93
2275 4230 4.751600 TGTTTGAGATCTGTGCTGTTGTAG 59.248 41.667 0.00 0.00 0.00 2.74
2284 4239 8.572185 AGATCTGTGCTGTTGTAGTATATGTAG 58.428 37.037 0.00 0.00 0.00 2.74
2285 4240 6.504398 TCTGTGCTGTTGTAGTATATGTAGC 58.496 40.000 0.00 0.00 0.00 3.58
2286 4241 5.597806 TGTGCTGTTGTAGTATATGTAGCC 58.402 41.667 0.00 0.00 0.00 3.93
2287 4242 5.362717 TGTGCTGTTGTAGTATATGTAGCCT 59.637 40.000 0.00 0.00 0.00 4.58
2390 4355 9.976511 AAATCATTATATTGATGGTGAGCTTTG 57.023 29.630 10.16 0.00 36.48 2.77
2391 4356 8.701908 ATCATTATATTGATGGTGAGCTTTGT 57.298 30.769 8.90 0.00 35.05 2.83
2393 4358 9.625747 TCATTATATTGATGGTGAGCTTTGTTA 57.374 29.630 0.00 0.00 0.00 2.41
2439 4405 6.528537 TGTAAGCAATGCATGGATTAACTT 57.471 33.333 22.42 22.42 0.00 2.66
2440 4406 6.934056 TGTAAGCAATGCATGGATTAACTTT 58.066 32.000 23.37 13.81 0.00 2.66
2441 4407 8.060931 TGTAAGCAATGCATGGATTAACTTTA 57.939 30.769 23.37 14.77 0.00 1.85
2442 4408 8.694540 TGTAAGCAATGCATGGATTAACTTTAT 58.305 29.630 23.37 9.81 0.00 1.40
2443 4409 9.533253 GTAAGCAATGCATGGATTAACTTTATT 57.467 29.630 23.37 9.55 0.00 1.40
2444 4410 8.428186 AAGCAATGCATGGATTAACTTTATTG 57.572 30.769 12.50 0.00 0.00 1.90
2445 4411 7.784037 AGCAATGCATGGATTAACTTTATTGA 58.216 30.769 12.50 0.00 0.00 2.57
2485 4457 3.316308 ACTGCTTTGGATGTTCTGTGTTC 59.684 43.478 0.00 0.00 0.00 3.18
2492 4464 4.728772 TGGATGTTCTGTGTTCCATCTTT 58.271 39.130 0.00 0.00 33.40 2.52
2493 4465 5.875224 TGGATGTTCTGTGTTCCATCTTTA 58.125 37.500 0.00 0.00 33.40 1.85
2494 4466 5.939883 TGGATGTTCTGTGTTCCATCTTTAG 59.060 40.000 0.00 0.00 33.40 1.85
2495 4467 5.940470 GGATGTTCTGTGTTCCATCTTTAGT 59.060 40.000 0.00 0.00 35.24 2.24
2496 4468 7.103641 GGATGTTCTGTGTTCCATCTTTAGTA 58.896 38.462 0.00 0.00 35.24 1.82
2498 4470 9.167311 GATGTTCTGTGTTCCATCTTTAGTATT 57.833 33.333 0.00 0.00 32.78 1.89
2499 4471 8.547967 TGTTCTGTGTTCCATCTTTAGTATTC 57.452 34.615 0.00 0.00 0.00 1.75
2500 4472 7.606456 TGTTCTGTGTTCCATCTTTAGTATTCC 59.394 37.037 0.00 0.00 0.00 3.01
2501 4473 7.496346 TCTGTGTTCCATCTTTAGTATTCCT 57.504 36.000 0.00 0.00 0.00 3.36
2502 4474 7.331026 TCTGTGTTCCATCTTTAGTATTCCTG 58.669 38.462 0.00 0.00 0.00 3.86
2574 4546 8.621532 TTACATATCTGCATGGAATTTCTACC 57.378 34.615 0.00 0.00 0.00 3.18
2575 4547 6.845908 ACATATCTGCATGGAATTTCTACCT 58.154 36.000 0.00 0.00 0.00 3.08
2576 4548 6.713903 ACATATCTGCATGGAATTTCTACCTG 59.286 38.462 0.00 0.00 0.00 4.00
2577 4549 4.574674 TCTGCATGGAATTTCTACCTGT 57.425 40.909 0.00 0.00 0.00 4.00
2578 4550 5.692115 TCTGCATGGAATTTCTACCTGTA 57.308 39.130 0.00 0.00 0.00 2.74
2579 4551 6.252599 TCTGCATGGAATTTCTACCTGTAT 57.747 37.500 0.00 0.00 0.00 2.29
2668 4640 4.097741 ACAGTCTTTGTTTGCACATGCTTA 59.902 37.500 5.31 0.00 38.29 3.09
2678 4650 5.956068 TTGCACATGCTTACTGTTCATTA 57.044 34.783 5.31 0.00 42.66 1.90
2685 4658 8.281194 CACATGCTTACTGTTCATTATCTGATC 58.719 37.037 0.00 0.00 32.72 2.92
3073 5055 0.036022 AGCACTTCTCTGTTGAGGGC 59.964 55.000 0.00 0.00 40.58 5.19
3520 5502 2.763448 GAGCCTCAAGGACTATGTGACT 59.237 50.000 0.00 0.00 37.39 3.41
3961 5946 0.749091 GCATGGCTGGCTACATGTCA 60.749 55.000 0.00 0.00 44.74 3.58
4048 6033 1.847818 CCGACAAGAACGACAAGTCA 58.152 50.000 0.72 0.00 0.00 3.41
4267 6258 1.080025 GGTCGACTAAGCGCCAAGT 60.080 57.895 16.46 11.70 0.00 3.16
4286 6287 1.079819 CTGCCTGTCGTCGGATGTT 60.080 57.895 0.00 0.00 0.00 2.71
4339 6340 0.038526 AGTGTCGACGTTGGATGGTC 60.039 55.000 11.62 0.00 0.00 4.02
4384 6398 2.158330 GCCAAACATTAAGCGCGGC 61.158 57.895 8.83 0.67 0.00 6.53
4431 6445 7.094933 GGAACAGTTCGTTATTGTTGGTTCTAT 60.095 37.037 7.22 0.00 38.19 1.98
4481 6500 1.404035 TGCTATTGCTTGCATCTGCTG 59.596 47.619 3.53 0.00 40.07 4.41
4496 6515 5.727791 GCATCTGCTGTACTTATGTTTTCCG 60.728 44.000 0.00 0.00 38.21 4.30
4534 6558 2.174319 GGCCGCTTCTGGATTCGTC 61.174 63.158 0.00 0.00 0.00 4.20
4536 6560 1.424493 GCCGCTTCTGGATTCGTCTG 61.424 60.000 0.00 0.00 0.00 3.51
4538 6562 1.134367 CCGCTTCTGGATTCGTCTGTA 59.866 52.381 0.00 0.00 0.00 2.74
4540 6564 3.448686 CGCTTCTGGATTCGTCTGTAAT 58.551 45.455 0.00 0.00 0.00 1.89
4541 6565 4.499188 CCGCTTCTGGATTCGTCTGTAATA 60.499 45.833 0.00 0.00 0.00 0.98
4543 6567 6.379386 CGCTTCTGGATTCGTCTGTAATATA 58.621 40.000 0.00 0.00 0.00 0.86
4544 6568 6.524933 CGCTTCTGGATTCGTCTGTAATATAG 59.475 42.308 0.00 0.00 0.00 1.31
4547 6571 6.010850 TCTGGATTCGTCTGTAATATAGCCT 58.989 40.000 0.00 0.00 0.00 4.58
4549 6573 7.015292 TCTGGATTCGTCTGTAATATAGCCTTT 59.985 37.037 0.00 0.00 0.00 3.11
4550 6574 7.506114 TGGATTCGTCTGTAATATAGCCTTTT 58.494 34.615 0.00 0.00 0.00 2.27
4551 6575 7.990886 TGGATTCGTCTGTAATATAGCCTTTTT 59.009 33.333 0.00 0.00 0.00 1.94
4552 6576 8.496751 GGATTCGTCTGTAATATAGCCTTTTTC 58.503 37.037 0.00 0.00 0.00 2.29
4554 6578 9.614792 ATTCGTCTGTAATATAGCCTTTTTCTT 57.385 29.630 0.00 0.00 0.00 2.52
4555 6579 8.644318 TCGTCTGTAATATAGCCTTTTTCTTC 57.356 34.615 0.00 0.00 0.00 2.87
4556 6580 7.434307 TCGTCTGTAATATAGCCTTTTTCTTCG 59.566 37.037 0.00 0.00 0.00 3.79
4557 6581 7.222224 CGTCTGTAATATAGCCTTTTTCTTCGT 59.778 37.037 0.00 0.00 0.00 3.85
4601 6684 5.185828 GGCAAAGGAAACTAACCAAGATGAT 59.814 40.000 0.00 0.00 42.68 2.45
4604 6687 7.627300 GCAAAGGAAACTAACCAAGATGATCTC 60.627 40.741 0.00 0.00 42.68 2.75
4606 6689 5.422331 AGGAAACTAACCAAGATGATCTCGA 59.578 40.000 0.00 0.00 40.61 4.04
4607 6690 5.520649 GGAAACTAACCAAGATGATCTCGAC 59.479 44.000 0.00 0.00 0.00 4.20
4609 6692 3.695060 ACTAACCAAGATGATCTCGACGT 59.305 43.478 0.00 0.00 0.00 4.34
4610 6693 2.853731 ACCAAGATGATCTCGACGTC 57.146 50.000 5.18 5.18 0.00 4.34
4611 6694 1.064208 ACCAAGATGATCTCGACGTCG 59.936 52.381 31.30 31.30 41.45 5.12
4612 6695 1.064208 CCAAGATGATCTCGACGTCGT 59.936 52.381 34.40 18.37 40.80 4.34
4613 6696 2.367772 CAAGATGATCTCGACGTCGTC 58.632 52.381 34.40 25.35 40.80 4.20
4614 6697 1.653151 AGATGATCTCGACGTCGTCA 58.347 50.000 34.40 29.58 40.80 4.35
4615 6698 2.214347 AGATGATCTCGACGTCGTCAT 58.786 47.619 30.73 30.73 40.80 3.06
4616 6699 2.614520 AGATGATCTCGACGTCGTCATT 59.385 45.455 30.77 21.60 40.80 2.57
4617 6700 2.174060 TGATCTCGACGTCGTCATTG 57.826 50.000 34.40 20.34 40.80 2.82
4618 6701 0.840729 GATCTCGACGTCGTCATTGC 59.159 55.000 34.40 17.59 40.80 3.56
4620 6703 0.170339 TCTCGACGTCGTCATTGCAT 59.830 50.000 34.40 0.00 40.80 3.96
4622 6705 0.800683 TCGACGTCGTCATTGCATCC 60.801 55.000 34.40 0.00 40.80 3.51
4624 6707 0.370273 GACGTCGTCATTGCATCCAC 59.630 55.000 20.28 0.00 32.09 4.02
4625 6708 1.344837 CGTCGTCATTGCATCCACG 59.655 57.895 5.68 5.68 0.00 4.94
4626 6709 1.715585 GTCGTCATTGCATCCACGG 59.284 57.895 10.77 0.00 33.02 4.94
4627 6710 2.106074 TCGTCATTGCATCCACGGC 61.106 57.895 10.77 0.00 33.02 5.68
4628 6711 2.404789 GTCATTGCATCCACGGCG 59.595 61.111 4.80 4.80 0.00 6.46
4629 6712 2.823593 TCATTGCATCCACGGCGG 60.824 61.111 13.24 0.00 0.00 6.13
4630 6713 4.557605 CATTGCATCCACGGCGGC 62.558 66.667 13.24 4.77 33.14 6.53
4659 6742 2.670934 GCCAGTGCCAGAGTGGTG 60.671 66.667 0.00 0.00 46.08 4.17
4661 6744 1.004080 CCAGTGCCAGAGTGGTGAG 60.004 63.158 0.00 0.00 40.05 3.51
4662 6745 1.004080 CAGTGCCAGAGTGGTGAGG 60.004 63.158 0.00 0.00 40.46 3.86
4665 6748 2.046507 GCCAGAGTGGTGAGGCTG 60.047 66.667 0.00 0.00 43.70 4.85
4666 6749 2.667418 CCAGAGTGGTGAGGCTGG 59.333 66.667 0.00 0.00 41.62 4.85
4667 6750 2.046507 CAGAGTGGTGAGGCTGGC 60.047 66.667 0.00 0.00 0.00 4.85
4668 6751 2.203907 AGAGTGGTGAGGCTGGCT 60.204 61.111 2.24 2.24 0.00 4.75
4669 6752 2.046507 GAGTGGTGAGGCTGGCTG 60.047 66.667 9.06 0.00 0.00 4.85
4674 6757 4.479993 GTGAGGCTGGCTGGCGAT 62.480 66.667 9.06 0.00 46.88 4.58
4675 6758 4.478371 TGAGGCTGGCTGGCGATG 62.478 66.667 9.06 0.00 46.88 3.84
4680 6763 4.827087 CTGGCTGGCGATGCGTCT 62.827 66.667 4.05 0.00 30.55 4.18
4681 6764 4.393155 TGGCTGGCGATGCGTCTT 62.393 61.111 4.05 0.00 30.55 3.01
4682 6765 2.202878 GGCTGGCGATGCGTCTTA 60.203 61.111 4.05 0.00 30.55 2.10
4683 6766 1.595382 GGCTGGCGATGCGTCTTAT 60.595 57.895 4.05 0.00 30.55 1.73
4684 6767 1.560860 GGCTGGCGATGCGTCTTATC 61.561 60.000 4.05 0.00 30.55 1.75
4685 6768 0.598680 GCTGGCGATGCGTCTTATCT 60.599 55.000 4.05 0.00 30.55 1.98
4686 6769 1.413382 CTGGCGATGCGTCTTATCTC 58.587 55.000 4.05 0.00 30.55 2.75
4687 6770 1.000827 CTGGCGATGCGTCTTATCTCT 60.001 52.381 4.05 0.00 30.55 3.10
4688 6771 1.269257 TGGCGATGCGTCTTATCTCTG 60.269 52.381 4.05 0.00 30.55 3.35
4689 6772 1.001268 GGCGATGCGTCTTATCTCTGA 60.001 52.381 4.05 0.00 0.00 3.27
4690 6773 2.315011 GCGATGCGTCTTATCTCTGAG 58.685 52.381 4.05 0.00 0.00 3.35
4691 6774 2.287308 GCGATGCGTCTTATCTCTGAGT 60.287 50.000 4.05 0.00 0.00 3.41
4692 6775 3.793801 GCGATGCGTCTTATCTCTGAGTT 60.794 47.826 4.05 0.00 0.00 3.01
4693 6776 4.554919 GCGATGCGTCTTATCTCTGAGTTA 60.555 45.833 4.05 0.00 0.00 2.24
4694 6777 5.143660 CGATGCGTCTTATCTCTGAGTTAG 58.856 45.833 4.05 1.46 0.00 2.34
4695 6778 4.294416 TGCGTCTTATCTCTGAGTTAGC 57.706 45.455 4.32 1.89 0.00 3.09
4696 6779 3.948473 TGCGTCTTATCTCTGAGTTAGCT 59.052 43.478 4.32 0.00 0.00 3.32
4697 6780 4.399618 TGCGTCTTATCTCTGAGTTAGCTT 59.600 41.667 4.32 0.00 0.00 3.74
4698 6781 4.737765 GCGTCTTATCTCTGAGTTAGCTTG 59.262 45.833 4.32 0.00 0.00 4.01
4699 6782 5.677598 GCGTCTTATCTCTGAGTTAGCTTGT 60.678 44.000 4.32 0.00 0.00 3.16
4700 6783 5.968848 CGTCTTATCTCTGAGTTAGCTTGTC 59.031 44.000 4.32 0.00 0.00 3.18
4701 6784 6.183360 CGTCTTATCTCTGAGTTAGCTTGTCT 60.183 42.308 4.32 0.00 0.00 3.41
4702 6785 7.193595 GTCTTATCTCTGAGTTAGCTTGTCTC 58.806 42.308 4.32 0.00 0.00 3.36
4703 6786 6.887002 TCTTATCTCTGAGTTAGCTTGTCTCA 59.113 38.462 4.32 12.32 36.85 3.27
4704 6787 5.991933 ATCTCTGAGTTAGCTTGTCTCAA 57.008 39.130 4.32 3.57 37.68 3.02
4705 6788 5.127693 TCTCTGAGTTAGCTTGTCTCAAC 57.872 43.478 4.32 2.50 37.68 3.18
4706 6789 4.830046 TCTCTGAGTTAGCTTGTCTCAACT 59.170 41.667 4.32 6.79 37.68 3.16
4707 6790 5.048364 TCTCTGAGTTAGCTTGTCTCAACTC 60.048 44.000 15.03 15.03 44.56 3.01
4710 6793 5.837586 GAGTTAGCTTGTCTCAACTCAAG 57.162 43.478 16.42 0.00 44.02 3.02
4711 6794 4.636249 AGTTAGCTTGTCTCAACTCAAGG 58.364 43.478 0.00 0.00 40.64 3.61
4712 6795 4.345257 AGTTAGCTTGTCTCAACTCAAGGA 59.655 41.667 0.00 0.00 40.64 3.36
4713 6796 3.845781 AGCTTGTCTCAACTCAAGGAA 57.154 42.857 6.96 0.00 40.64 3.36
4714 6797 4.156455 AGCTTGTCTCAACTCAAGGAAA 57.844 40.909 6.96 0.00 40.64 3.13
4715 6798 4.723309 AGCTTGTCTCAACTCAAGGAAAT 58.277 39.130 6.96 0.00 40.64 2.17
4716 6799 5.869579 AGCTTGTCTCAACTCAAGGAAATA 58.130 37.500 6.96 0.00 40.64 1.40
4717 6800 6.299141 AGCTTGTCTCAACTCAAGGAAATAA 58.701 36.000 6.96 0.00 40.64 1.40
4718 6801 6.772716 AGCTTGTCTCAACTCAAGGAAATAAA 59.227 34.615 6.96 0.00 40.64 1.40
4719 6802 7.040823 AGCTTGTCTCAACTCAAGGAAATAAAG 60.041 37.037 6.96 0.00 40.64 1.85
4720 6803 7.041098 GCTTGTCTCAACTCAAGGAAATAAAGA 60.041 37.037 6.96 0.00 40.64 2.52
4721 6804 8.924511 TTGTCTCAACTCAAGGAAATAAAGAT 57.075 30.769 0.00 0.00 0.00 2.40
4722 6805 8.327941 TGTCTCAACTCAAGGAAATAAAGATG 57.672 34.615 0.00 0.00 0.00 2.90
4723 6806 7.939039 TGTCTCAACTCAAGGAAATAAAGATGT 59.061 33.333 0.00 0.00 0.00 3.06
4724 6807 8.233190 GTCTCAACTCAAGGAAATAAAGATGTG 58.767 37.037 0.00 0.00 0.00 3.21
4725 6808 7.939039 TCTCAACTCAAGGAAATAAAGATGTGT 59.061 33.333 0.00 0.00 0.00 3.72
4726 6809 8.099364 TCAACTCAAGGAAATAAAGATGTGTC 57.901 34.615 0.00 0.00 0.00 3.67
4727 6810 7.719193 TCAACTCAAGGAAATAAAGATGTGTCA 59.281 33.333 0.00 0.00 0.00 3.58
4728 6811 8.517878 CAACTCAAGGAAATAAAGATGTGTCAT 58.482 33.333 0.00 0.00 0.00 3.06
4729 6812 8.641498 ACTCAAGGAAATAAAGATGTGTCATT 57.359 30.769 0.00 0.00 0.00 2.57
4766 6856 4.678509 TTTTTACATAGCCTTGCGACTG 57.321 40.909 0.00 0.00 0.00 3.51
4767 6857 2.309528 TTACATAGCCTTGCGACTGG 57.690 50.000 0.00 0.00 0.00 4.00
4770 6860 1.210478 ACATAGCCTTGCGACTGGAAT 59.790 47.619 0.00 0.00 0.00 3.01
4771 6861 1.869767 CATAGCCTTGCGACTGGAATC 59.130 52.381 0.00 0.00 0.00 2.52
4772 6862 1.195115 TAGCCTTGCGACTGGAATCT 58.805 50.000 0.00 0.00 0.00 2.40
4773 6863 0.326264 AGCCTTGCGACTGGAATCTT 59.674 50.000 0.00 0.00 0.00 2.40
4774 6864 1.555075 AGCCTTGCGACTGGAATCTTA 59.445 47.619 0.00 0.00 0.00 2.10
4775 6865 2.027192 AGCCTTGCGACTGGAATCTTAA 60.027 45.455 0.00 0.00 0.00 1.85
4776 6866 2.945668 GCCTTGCGACTGGAATCTTAAT 59.054 45.455 0.00 0.00 0.00 1.40
4778 6868 4.757149 GCCTTGCGACTGGAATCTTAATAT 59.243 41.667 0.00 0.00 0.00 1.28
4779 6869 5.239525 GCCTTGCGACTGGAATCTTAATATT 59.760 40.000 0.00 0.00 0.00 1.28
4780 6870 6.662616 CCTTGCGACTGGAATCTTAATATTG 58.337 40.000 0.00 0.00 0.00 1.90
4781 6871 6.483307 CCTTGCGACTGGAATCTTAATATTGA 59.517 38.462 0.00 0.00 0.00 2.57
4782 6872 7.012327 CCTTGCGACTGGAATCTTAATATTGAA 59.988 37.037 0.00 0.00 0.00 2.69
4783 6873 7.246674 TGCGACTGGAATCTTAATATTGAAC 57.753 36.000 0.00 0.00 0.00 3.18
4784 6874 6.260050 TGCGACTGGAATCTTAATATTGAACC 59.740 38.462 0.00 0.00 0.00 3.62
4785 6875 6.483640 GCGACTGGAATCTTAATATTGAACCT 59.516 38.462 0.00 0.00 0.00 3.50
4786 6876 7.656137 GCGACTGGAATCTTAATATTGAACCTA 59.344 37.037 0.00 0.00 0.00 3.08
4787 6877 9.542462 CGACTGGAATCTTAATATTGAACCTAA 57.458 33.333 0.00 0.00 0.00 2.69
4820 6910 1.626321 TGCAACCCGGTCTTCTTATCA 59.374 47.619 0.00 0.00 0.00 2.15
4821 6911 2.280628 GCAACCCGGTCTTCTTATCAG 58.719 52.381 0.00 0.00 0.00 2.90
4823 6931 2.500098 CAACCCGGTCTTCTTATCAGGA 59.500 50.000 0.00 0.00 0.00 3.86
4828 6936 3.067461 CCGGTCTTCTTATCAGGAGTGAG 59.933 52.174 0.00 0.00 35.66 3.51
4861 6980 4.386413 CCACAGGTGGTCTCTTGC 57.614 61.111 10.34 0.00 45.53 4.01
4864 6983 0.321122 CACAGGTGGTCTCTTGCTCC 60.321 60.000 0.00 0.00 0.00 4.70
4871 7002 0.842635 GGTCTCTTGCTCCCATGGAT 59.157 55.000 15.22 0.00 0.00 3.41
4874 7005 1.767088 TCTCTTGCTCCCATGGATCTG 59.233 52.381 15.22 0.00 0.00 2.90
4932 7063 1.938585 TCCTCACATCGGTTTCTCCT 58.061 50.000 0.00 0.00 0.00 3.69
4933 7064 2.257207 TCCTCACATCGGTTTCTCCTT 58.743 47.619 0.00 0.00 0.00 3.36
4934 7065 2.637872 TCCTCACATCGGTTTCTCCTTT 59.362 45.455 0.00 0.00 0.00 3.11
4935 7066 3.072476 TCCTCACATCGGTTTCTCCTTTT 59.928 43.478 0.00 0.00 0.00 2.27
4936 7067 3.821033 CCTCACATCGGTTTCTCCTTTTT 59.179 43.478 0.00 0.00 0.00 1.94
4960 7091 8.568732 TTTTAAAGCTTAACTCACATTTTCGG 57.431 30.769 0.00 0.00 0.00 4.30
4961 7092 4.766404 AAGCTTAACTCACATTTTCGGG 57.234 40.909 0.00 0.00 0.00 5.14
4962 7093 4.015872 AGCTTAACTCACATTTTCGGGA 57.984 40.909 0.00 0.00 0.00 5.14
4963 7094 4.003648 AGCTTAACTCACATTTTCGGGAG 58.996 43.478 0.00 0.00 0.00 4.30
4964 7095 3.426292 GCTTAACTCACATTTTCGGGAGC 60.426 47.826 0.00 0.00 0.00 4.70
4965 7096 1.156736 AACTCACATTTTCGGGAGCG 58.843 50.000 0.00 0.00 0.00 5.03
4966 7097 0.673644 ACTCACATTTTCGGGAGCGG 60.674 55.000 0.00 0.00 0.00 5.52
4967 7098 0.391130 CTCACATTTTCGGGAGCGGA 60.391 55.000 0.00 0.00 0.00 5.54
4968 7099 0.251916 TCACATTTTCGGGAGCGGAT 59.748 50.000 0.00 0.00 0.00 4.18
4969 7100 0.378257 CACATTTTCGGGAGCGGATG 59.622 55.000 0.00 0.00 0.00 3.51
4970 7101 1.356624 CATTTTCGGGAGCGGATGC 59.643 57.895 0.00 0.00 43.24 3.91
4990 7121 2.411409 GCTGCTCGAGCTAAAGATATGC 59.589 50.000 35.27 20.20 45.21 3.14
4991 7122 2.992543 CTGCTCGAGCTAAAGATATGCC 59.007 50.000 35.27 4.97 42.66 4.40
4992 7123 2.289072 TGCTCGAGCTAAAGATATGCCC 60.289 50.000 35.27 4.52 42.66 5.36
4993 7124 2.933056 GCTCGAGCTAAAGATATGCCCC 60.933 54.545 29.88 0.00 38.21 5.80
4994 7125 1.623811 TCGAGCTAAAGATATGCCCCC 59.376 52.381 0.00 0.00 0.00 5.40
4995 7126 1.625818 CGAGCTAAAGATATGCCCCCT 59.374 52.381 0.00 0.00 0.00 4.79
4996 7127 2.832129 CGAGCTAAAGATATGCCCCCTA 59.168 50.000 0.00 0.00 0.00 3.53
4997 7128 3.260884 CGAGCTAAAGATATGCCCCCTAA 59.739 47.826 0.00 0.00 0.00 2.69
4998 7129 4.580868 GAGCTAAAGATATGCCCCCTAAC 58.419 47.826 0.00 0.00 0.00 2.34
4999 7130 4.243643 AGCTAAAGATATGCCCCCTAACT 58.756 43.478 0.00 0.00 0.00 2.24
5000 7131 4.287326 AGCTAAAGATATGCCCCCTAACTC 59.713 45.833 0.00 0.00 0.00 3.01
5001 7132 4.287326 GCTAAAGATATGCCCCCTAACTCT 59.713 45.833 0.00 0.00 0.00 3.24
5002 7133 5.221945 GCTAAAGATATGCCCCCTAACTCTT 60.222 44.000 0.00 0.00 0.00 2.85
5003 7134 4.713792 AAGATATGCCCCCTAACTCTTG 57.286 45.455 0.00 0.00 0.00 3.02
5004 7135 3.941629 AGATATGCCCCCTAACTCTTGA 58.058 45.455 0.00 0.00 0.00 3.02
5005 7136 4.307259 AGATATGCCCCCTAACTCTTGAA 58.693 43.478 0.00 0.00 0.00 2.69
5006 7137 2.808906 ATGCCCCCTAACTCTTGAAC 57.191 50.000 0.00 0.00 0.00 3.18
5007 7138 1.440618 TGCCCCCTAACTCTTGAACA 58.559 50.000 0.00 0.00 0.00 3.18
5008 7139 1.351017 TGCCCCCTAACTCTTGAACAG 59.649 52.381 0.00 0.00 0.00 3.16
5009 7140 1.950954 GCCCCCTAACTCTTGAACAGC 60.951 57.143 0.00 0.00 0.00 4.40
5010 7141 1.630878 CCCCCTAACTCTTGAACAGCT 59.369 52.381 0.00 0.00 0.00 4.24
5011 7142 2.355209 CCCCCTAACTCTTGAACAGCTC 60.355 54.545 0.00 0.00 0.00 4.09
5012 7143 2.355209 CCCCTAACTCTTGAACAGCTCC 60.355 54.545 0.00 0.00 0.00 4.70
5013 7144 2.355209 CCCTAACTCTTGAACAGCTCCC 60.355 54.545 0.00 0.00 0.00 4.30
5014 7145 2.303022 CCTAACTCTTGAACAGCTCCCA 59.697 50.000 0.00 0.00 0.00 4.37
5015 7146 2.262423 AACTCTTGAACAGCTCCCAC 57.738 50.000 0.00 0.00 0.00 4.61
5016 7147 1.428869 ACTCTTGAACAGCTCCCACT 58.571 50.000 0.00 0.00 0.00 4.00
5017 7148 1.771255 ACTCTTGAACAGCTCCCACTT 59.229 47.619 0.00 0.00 0.00 3.16
5018 7149 2.173569 ACTCTTGAACAGCTCCCACTTT 59.826 45.455 0.00 0.00 0.00 2.66
5019 7150 2.551459 CTCTTGAACAGCTCCCACTTTG 59.449 50.000 0.00 0.00 0.00 2.77
5020 7151 1.610522 CTTGAACAGCTCCCACTTTGG 59.389 52.381 0.00 0.00 37.25 3.28
5021 7152 0.823356 TGAACAGCTCCCACTTTGGC 60.823 55.000 0.00 0.00 35.79 4.52
5022 7153 1.527433 GAACAGCTCCCACTTTGGCC 61.527 60.000 0.00 0.00 35.79 5.36
5023 7154 3.058160 CAGCTCCCACTTTGGCCG 61.058 66.667 0.00 0.00 35.79 6.13
5024 7155 3.249189 AGCTCCCACTTTGGCCGA 61.249 61.111 0.00 0.00 35.79 5.54
5025 7156 2.044946 GCTCCCACTTTGGCCGAT 60.045 61.111 0.00 0.00 35.79 4.18
5079 7210 2.704572 GACCCTGAAGTCCTTCACATG 58.295 52.381 5.64 0.00 43.90 3.21
5087 7218 3.430042 AGTCCTTCACATGTGAGCAAT 57.570 42.857 26.48 12.26 41.13 3.56
5088 7219 3.341823 AGTCCTTCACATGTGAGCAATC 58.658 45.455 26.48 16.98 41.13 2.67
5089 7220 2.094894 GTCCTTCACATGTGAGCAATCG 59.905 50.000 26.48 12.51 41.13 3.34
5094 7228 0.322816 ACATGTGAGCAATCGGGCTT 60.323 50.000 0.00 0.00 45.99 4.35
5174 7339 5.044919 ACCAAATGGAGTTATCACAGGATCA 60.045 40.000 6.42 0.00 38.94 2.92
5235 7400 2.038659 CCTTTTTGTTCCCCAGCAGAA 58.961 47.619 0.00 0.00 0.00 3.02
5255 7420 6.564873 GCAGAACAAGATGTCAGTAACTCAAC 60.565 42.308 0.00 0.00 0.00 3.18
5256 7421 6.479990 CAGAACAAGATGTCAGTAACTCAACA 59.520 38.462 0.00 0.00 0.00 3.33
5257 7422 6.480320 AGAACAAGATGTCAGTAACTCAACAC 59.520 38.462 0.00 0.00 0.00 3.32
5258 7423 5.670485 ACAAGATGTCAGTAACTCAACACA 58.330 37.500 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 7.117236 AGCAAGCATAGACAACATTTTTCAATG 59.883 33.333 0.00 0.00 44.90 2.82
37 38 7.219484 ACTTAGCAAGCATAGACAACATTTT 57.781 32.000 0.00 0.00 0.00 1.82
127 130 7.599621 CACAAAATCATCACTCCAAAATGCTTA 59.400 33.333 0.00 0.00 0.00 3.09
131 134 6.702723 ACACACAAAATCATCACTCCAAAATG 59.297 34.615 0.00 0.00 0.00 2.32
141 144 3.635836 TGGCAGAACACACAAAATCATCA 59.364 39.130 0.00 0.00 0.00 3.07
144 147 2.223456 CGTGGCAGAACACACAAAATCA 60.223 45.455 0.00 0.00 41.38 2.57
153 156 1.279840 GCAAGTCGTGGCAGAACAC 59.720 57.895 0.00 0.00 37.99 3.32
155 158 1.279840 GTGCAAGTCGTGGCAGAAC 59.720 57.895 0.00 0.00 41.35 3.01
158 161 0.311790 ATTTGTGCAAGTCGTGGCAG 59.688 50.000 0.00 0.00 41.35 4.85
159 162 0.030504 CATTTGTGCAAGTCGTGGCA 59.969 50.000 0.00 0.00 37.77 4.92
160 163 0.030638 ACATTTGTGCAAGTCGTGGC 59.969 50.000 0.00 0.00 0.00 5.01
162 165 2.753989 TGACATTTGTGCAAGTCGTG 57.246 45.000 0.00 0.00 33.83 4.35
163 166 3.988379 ATTGACATTTGTGCAAGTCGT 57.012 38.095 0.00 0.00 33.83 4.34
164 167 4.146961 GTGAATTGACATTTGTGCAAGTCG 59.853 41.667 13.35 0.00 38.88 4.18
165 168 4.146961 CGTGAATTGACATTTGTGCAAGTC 59.853 41.667 12.27 12.27 37.20 3.01
166 169 4.043750 CGTGAATTGACATTTGTGCAAGT 58.956 39.130 0.00 0.00 0.00 3.16
167 170 4.289342 TCGTGAATTGACATTTGTGCAAG 58.711 39.130 0.00 0.00 0.00 4.01
168 171 4.298744 TCGTGAATTGACATTTGTGCAA 57.701 36.364 0.00 0.00 0.00 4.08
169 172 3.978718 TCGTGAATTGACATTTGTGCA 57.021 38.095 0.00 0.00 0.00 4.57
170 173 4.475028 TCATCGTGAATTGACATTTGTGC 58.525 39.130 0.00 0.00 0.00 4.57
188 191 7.704472 TGTTGTCAATGGTTGTAAAGTTTCATC 59.296 33.333 0.00 0.00 0.00 2.92
199 202 5.068855 TGTCATGAATGTTGTCAATGGTTGT 59.931 36.000 0.00 0.00 0.00 3.32
203 206 7.661127 AATTTGTCATGAATGTTGTCAATGG 57.339 32.000 0.00 0.00 0.00 3.16
257 260 7.519328 GCTCCGTATGAACAGTAAAGTCAAAAA 60.519 37.037 0.00 0.00 0.00 1.94
260 263 4.927425 GCTCCGTATGAACAGTAAAGTCAA 59.073 41.667 0.00 0.00 0.00 3.18
262 265 4.745649 AGCTCCGTATGAACAGTAAAGTC 58.254 43.478 0.00 0.00 0.00 3.01
263 266 4.219944 TGAGCTCCGTATGAACAGTAAAGT 59.780 41.667 12.15 0.00 0.00 2.66
264 267 4.744570 TGAGCTCCGTATGAACAGTAAAG 58.255 43.478 12.15 0.00 0.00 1.85
283 288 0.173481 TCGTCCCGAGCTCAAATGAG 59.827 55.000 15.40 6.05 44.75 2.90
287 292 2.097036 TCTTATCGTCCCGAGCTCAAA 58.903 47.619 15.40 0.00 39.91 2.69
288 293 1.676529 CTCTTATCGTCCCGAGCTCAA 59.323 52.381 15.40 0.00 39.91 3.02
301 306 5.862323 TGTTGCACTCGAAAGTACTCTTATC 59.138 40.000 0.00 0.00 33.25 1.75
311 316 4.153117 AGAAAGCTATGTTGCACTCGAAAG 59.847 41.667 0.00 0.00 34.99 2.62
315 320 3.433274 TCAAGAAAGCTATGTTGCACTCG 59.567 43.478 0.00 0.00 34.99 4.18
331 336 3.317993 GCTAAACCCTTTGCTGTCAAGAA 59.682 43.478 0.00 0.00 33.12 2.52
335 340 1.953686 GTGCTAAACCCTTTGCTGTCA 59.046 47.619 0.00 0.00 0.00 3.58
340 345 1.605457 GGCTTGTGCTAAACCCTTTGC 60.605 52.381 0.00 0.00 39.59 3.68
360 365 8.768019 CAATACAACATACATCACTACTCATGG 58.232 37.037 0.00 0.00 0.00 3.66
374 379 8.721478 CCCTCTTGCATATACAATACAACATAC 58.279 37.037 0.00 0.00 0.00 2.39
378 383 7.568199 AACCCTCTTGCATATACAATACAAC 57.432 36.000 0.00 0.00 0.00 3.32
385 390 4.199310 GCTGAAACCCTCTTGCATATACA 58.801 43.478 0.00 0.00 0.00 2.29
393 402 3.318839 TGAAACATGCTGAAACCCTCTTG 59.681 43.478 0.00 0.00 0.00 3.02
471 480 2.855660 ACAACCGGTAAAAGTGTTGC 57.144 45.000 8.00 0.00 41.28 4.17
501 513 6.653740 AGGCAAATAGCTTACGTTACTCTTTT 59.346 34.615 0.00 0.00 44.79 2.27
502 514 6.092259 CAGGCAAATAGCTTACGTTACTCTTT 59.908 38.462 0.00 0.00 44.79 2.52
505 517 4.868734 ACAGGCAAATAGCTTACGTTACTC 59.131 41.667 0.00 0.00 44.79 2.59
506 518 4.828829 ACAGGCAAATAGCTTACGTTACT 58.171 39.130 0.00 0.00 44.79 2.24
507 519 5.006068 GGTACAGGCAAATAGCTTACGTTAC 59.994 44.000 0.00 0.00 44.79 2.50
508 520 5.105228 AGGTACAGGCAAATAGCTTACGTTA 60.105 40.000 0.00 0.00 44.79 3.18
509 521 3.937079 GGTACAGGCAAATAGCTTACGTT 59.063 43.478 0.00 0.00 44.79 3.99
511 523 3.555956 CAGGTACAGGCAAATAGCTTACG 59.444 47.826 0.00 0.00 44.79 3.18
513 525 4.141711 CCTCAGGTACAGGCAAATAGCTTA 60.142 45.833 0.00 0.00 44.79 3.09
514 526 3.370953 CCTCAGGTACAGGCAAATAGCTT 60.371 47.826 0.00 0.00 44.79 3.74
517 529 3.706594 TCTCCTCAGGTACAGGCAAATAG 59.293 47.826 0.00 0.00 0.00 1.73
525 539 4.442612 CCATGTGATTCTCCTCAGGTACAG 60.443 50.000 0.00 0.00 0.00 2.74
584 598 0.796312 CGGTTGATTGGGTGTCTTCG 59.204 55.000 0.00 0.00 0.00 3.79
594 608 2.560542 TGGATTCCAAACCGGTTGATTG 59.439 45.455 23.08 15.62 39.87 2.67
602 618 2.490509 GGTTTAGGTGGATTCCAAACCG 59.509 50.000 17.25 0.00 38.04 4.44
639 655 3.517500 TGGTTTTTGGAAGGCAAAAGAGT 59.482 39.130 0.00 0.00 33.74 3.24
640 656 4.135747 TGGTTTTTGGAAGGCAAAAGAG 57.864 40.909 0.00 0.00 33.74 2.85
641 657 4.019771 ACTTGGTTTTTGGAAGGCAAAAGA 60.020 37.500 0.00 0.00 33.74 2.52
642 658 4.260985 ACTTGGTTTTTGGAAGGCAAAAG 58.739 39.130 0.00 0.00 33.74 2.27
643 659 4.257731 GACTTGGTTTTTGGAAGGCAAAA 58.742 39.130 0.00 0.00 0.00 2.44
644 660 3.369997 GGACTTGGTTTTTGGAAGGCAAA 60.370 43.478 0.00 0.00 0.00 3.68
645 661 2.169561 GGACTTGGTTTTTGGAAGGCAA 59.830 45.455 0.00 0.00 0.00 4.52
646 662 1.760029 GGACTTGGTTTTTGGAAGGCA 59.240 47.619 0.00 0.00 0.00 4.75
647 663 1.760029 TGGACTTGGTTTTTGGAAGGC 59.240 47.619 0.00 0.00 0.00 4.35
648 664 4.161377 TCTTTGGACTTGGTTTTTGGAAGG 59.839 41.667 0.00 0.00 0.00 3.46
649 665 5.337578 TCTTTGGACTTGGTTTTTGGAAG 57.662 39.130 0.00 0.00 0.00 3.46
650 666 5.948742 ATCTTTGGACTTGGTTTTTGGAA 57.051 34.783 0.00 0.00 0.00 3.53
651 667 5.303333 GGTATCTTTGGACTTGGTTTTTGGA 59.697 40.000 0.00 0.00 0.00 3.53
652 668 5.069781 TGGTATCTTTGGACTTGGTTTTTGG 59.930 40.000 0.00 0.00 0.00 3.28
653 669 6.155475 TGGTATCTTTGGACTTGGTTTTTG 57.845 37.500 0.00 0.00 0.00 2.44
654 670 6.800072 TTGGTATCTTTGGACTTGGTTTTT 57.200 33.333 0.00 0.00 0.00 1.94
848 865 0.034089 AAGGTTCTACATGGGCCTGC 60.034 55.000 4.53 0.00 0.00 4.85
1222 1251 2.164219 CGTAACCTAAACCCTAGCGACA 59.836 50.000 0.00 0.00 0.00 4.35
1223 1252 2.164422 ACGTAACCTAAACCCTAGCGAC 59.836 50.000 0.00 0.00 0.00 5.19
1238 1267 0.591741 CGGATCTGGCTCGACGTAAC 60.592 60.000 0.00 0.00 0.00 2.50
1241 1270 2.341101 AACGGATCTGGCTCGACGT 61.341 57.895 6.47 0.00 35.95 4.34
1585 2808 0.685458 GGTAGGCGGAGTAGAACCCA 60.685 60.000 0.00 0.00 0.00 4.51
1588 2811 0.662085 CGAGGTAGGCGGAGTAGAAC 59.338 60.000 0.00 0.00 0.00 3.01
1813 3110 3.535561 CCTAAGCACAGAACCTACATGG 58.464 50.000 0.00 0.00 42.93 3.66
1841 3202 8.842280 CAAGTCAAACAAGTAACCTACCAATAA 58.158 33.333 0.00 0.00 0.00 1.40
1854 3215 5.297776 CAGATCAGGAACAAGTCAAACAAGT 59.702 40.000 0.00 0.00 0.00 3.16
1923 3637 4.411927 AGTAGATCACAGAACTGACAGGT 58.588 43.478 7.51 0.00 0.00 4.00
1953 3667 5.376625 TCATCACAGTTTAAAAGGCTCTGT 58.623 37.500 3.29 3.29 39.48 3.41
2012 3733 4.207891 AGCCTATCTACCACACAGTTTG 57.792 45.455 0.00 0.00 0.00 2.93
2017 3738 5.897250 TCAAGATAAGCCTATCTACCACACA 59.103 40.000 5.26 0.00 42.95 3.72
2020 3741 7.475137 AGATCAAGATAAGCCTATCTACCAC 57.525 40.000 5.26 0.00 42.95 4.16
2104 3826 9.791820 TCAATAATAGACAAATCAAACATGCTG 57.208 29.630 0.00 0.00 0.00 4.41
2150 3881 3.010584 AGTGAAGCCTCCCACATAAACAT 59.989 43.478 0.00 0.00 35.84 2.71
2152 3883 2.749621 CAGTGAAGCCTCCCACATAAAC 59.250 50.000 0.00 0.00 35.84 2.01
2154 3885 1.340017 GCAGTGAAGCCTCCCACATAA 60.340 52.381 0.00 0.00 35.84 1.90
2158 3889 0.324943 TAAGCAGTGAAGCCTCCCAC 59.675 55.000 0.00 0.00 34.23 4.61
2226 3962 9.638176 AAGCTGAGACAGGAATGATAAAATTAT 57.362 29.630 0.00 0.00 31.21 1.28
2252 4206 3.544684 ACAACAGCACAGATCTCAAACA 58.455 40.909 0.00 0.00 0.00 2.83
2257 4211 7.429633 ACATATACTACAACAGCACAGATCTC 58.570 38.462 0.00 0.00 0.00 2.75
2284 4239 6.814146 GTCACTCATATTTATACTAGGCAGGC 59.186 42.308 0.00 0.00 0.00 4.85
2285 4240 7.030165 CGTCACTCATATTTATACTAGGCAGG 58.970 42.308 0.00 0.00 0.00 4.85
2286 4241 7.594714 ACGTCACTCATATTTATACTAGGCAG 58.405 38.462 0.00 0.00 0.00 4.85
2287 4242 7.309012 GGACGTCACTCATATTTATACTAGGCA 60.309 40.741 18.91 0.00 0.00 4.75
2358 4323 9.850198 TCACCATCAATATAATGATTTCAGTCA 57.150 29.630 0.24 0.00 37.96 3.41
2360 4325 8.790718 GCTCACCATCAATATAATGATTTCAGT 58.209 33.333 0.24 0.00 37.96 3.41
2361 4326 9.011095 AGCTCACCATCAATATAATGATTTCAG 57.989 33.333 0.24 0.00 37.96 3.02
2373 4338 6.349280 GCAGTTAACAAAGCTCACCATCAATA 60.349 38.462 8.61 0.00 0.00 1.90
2381 4346 5.113502 AGAATGCAGTTAACAAAGCTCAC 57.886 39.130 8.61 4.93 0.00 3.51
2441 4407 9.860898 GCAGTAATTAAAAGAAGGTCAATCAAT 57.139 29.630 0.00 0.00 0.00 2.57
2442 4408 9.077885 AGCAGTAATTAAAAGAAGGTCAATCAA 57.922 29.630 0.00 0.00 0.00 2.57
2443 4409 8.635765 AGCAGTAATTAAAAGAAGGTCAATCA 57.364 30.769 0.00 0.00 0.00 2.57
2444 4410 9.914131 AAAGCAGTAATTAAAAGAAGGTCAATC 57.086 29.630 0.00 0.00 0.00 2.67
2445 4411 9.696917 CAAAGCAGTAATTAAAAGAAGGTCAAT 57.303 29.630 0.00 0.00 0.00 2.57
2485 4457 9.736023 GTTTTATTGCAGGAATACTAAAGATGG 57.264 33.333 0.00 0.00 0.00 3.51
2496 4468 8.752187 ACTGACATAATGTTTTATTGCAGGAAT 58.248 29.630 0.00 0.00 34.12 3.01
2498 4470 7.701539 ACTGACATAATGTTTTATTGCAGGA 57.298 32.000 0.00 0.00 34.12 3.86
2499 4471 8.649841 CAAACTGACATAATGTTTTATTGCAGG 58.350 33.333 0.00 0.00 34.12 4.85
2500 4472 9.409312 TCAAACTGACATAATGTTTTATTGCAG 57.591 29.630 0.00 0.00 35.03 4.41
2501 4473 9.755804 TTCAAACTGACATAATGTTTTATTGCA 57.244 25.926 0.00 0.00 32.42 4.08
2668 4640 9.896645 ATTGTAACAGATCAGATAATGAACAGT 57.103 29.630 0.00 1.89 42.53 3.55
2678 4650 6.071784 TGCAAGCAAATTGTAACAGATCAGAT 60.072 34.615 0.00 0.00 41.29 2.90
2685 4658 4.624024 CCATCTGCAAGCAAATTGTAACAG 59.376 41.667 0.00 0.00 41.29 3.16
3280 5262 1.558756 AGGATCTTGTTCTGCTGGAGG 59.441 52.381 0.00 0.00 0.00 4.30
3520 5502 3.375699 GTTCTGTCCCTCCTTCATCCTA 58.624 50.000 0.00 0.00 0.00 2.94
3961 5946 3.265221 TGATCTCCATGGTCTTCTTGCTT 59.735 43.478 12.58 0.00 0.00 3.91
4048 6033 0.326264 GCATCACCAGGTCCTTGACT 59.674 55.000 0.00 0.00 32.47 3.41
4267 6258 1.532604 AACATCCGACGACAGGCAGA 61.533 55.000 0.00 0.00 0.00 4.26
4339 6340 3.806316 AAAGACAAAACCGATACAGCG 57.194 42.857 0.00 0.00 0.00 5.18
4384 6398 2.987149 CACGAGTACCACAAACAGCTAG 59.013 50.000 0.00 0.00 0.00 3.42
4455 6474 3.952323 AGATGCAAGCAATAGCACAGAAT 59.048 39.130 0.00 0.00 44.49 2.40
4457 6476 2.681344 CAGATGCAAGCAATAGCACAGA 59.319 45.455 0.00 0.00 44.49 3.41
4459 6478 1.133598 GCAGATGCAAGCAATAGCACA 59.866 47.619 0.00 0.00 44.49 4.57
4460 6479 1.404391 AGCAGATGCAAGCAATAGCAC 59.596 47.619 7.68 0.00 44.49 4.40
4481 6500 6.345487 GCAAAAGCAACGGAAAACATAAGTAC 60.345 38.462 0.00 0.00 0.00 2.73
4496 6515 2.604462 CCACACAAAGAGCAAAAGCAAC 59.396 45.455 0.00 0.00 0.00 4.17
4514 6538 2.464459 CGAATCCAGAAGCGGCCAC 61.464 63.158 2.24 0.00 0.00 5.01
4541 6565 9.915629 CTCTATGTATACGAAGAAAAAGGCTAT 57.084 33.333 7.99 0.00 0.00 2.97
4543 6567 7.210873 CCTCTATGTATACGAAGAAAAAGGCT 58.789 38.462 7.99 0.00 0.00 4.58
4544 6568 6.073711 GCCTCTATGTATACGAAGAAAAAGGC 60.074 42.308 14.29 14.29 0.00 4.35
4547 6571 5.981315 CGGCCTCTATGTATACGAAGAAAAA 59.019 40.000 0.00 0.00 0.00 1.94
4549 6573 4.581824 ACGGCCTCTATGTATACGAAGAAA 59.418 41.667 0.00 0.00 0.00 2.52
4550 6574 4.023450 CACGGCCTCTATGTATACGAAGAA 60.023 45.833 0.00 0.00 0.00 2.52
4551 6575 3.501062 CACGGCCTCTATGTATACGAAGA 59.499 47.826 0.00 2.90 0.00 2.87
4552 6576 3.501062 TCACGGCCTCTATGTATACGAAG 59.499 47.826 0.00 0.00 0.00 3.79
4554 6578 3.130280 TCACGGCCTCTATGTATACGA 57.870 47.619 0.00 0.00 0.00 3.43
4555 6579 3.909776 TTCACGGCCTCTATGTATACG 57.090 47.619 0.00 0.00 0.00 3.06
4556 6580 4.495422 CCATTCACGGCCTCTATGTATAC 58.505 47.826 0.00 0.00 0.00 1.47
4557 6581 4.801330 CCATTCACGGCCTCTATGTATA 57.199 45.455 0.00 0.00 0.00 1.47
4589 6672 3.242641 CGACGTCGAGATCATCTTGGTTA 60.243 47.826 33.35 0.00 43.02 2.85
4601 6684 0.170339 ATGCAATGACGACGTCGAGA 59.830 50.000 41.52 27.04 43.02 4.04
4604 6687 1.075979 TGGATGCAATGACGACGTCG 61.076 55.000 34.58 34.58 46.33 5.12
4606 6689 1.351430 CGTGGATGCAATGACGACGT 61.351 55.000 0.00 0.00 32.12 4.34
4607 6690 1.344837 CGTGGATGCAATGACGACG 59.655 57.895 8.59 7.54 32.12 5.12
4609 6692 2.106074 GCCGTGGATGCAATGACGA 61.106 57.895 14.27 0.00 32.12 4.20
4610 6693 2.404789 GCCGTGGATGCAATGACG 59.595 61.111 7.55 7.55 0.00 4.35
4611 6694 2.404789 CGCCGTGGATGCAATGAC 59.595 61.111 0.00 0.00 0.00 3.06
4612 6695 2.823593 CCGCCGTGGATGCAATGA 60.824 61.111 0.00 0.00 42.00 2.57
4613 6696 4.557605 GCCGCCGTGGATGCAATG 62.558 66.667 0.88 0.00 42.00 2.82
4642 6725 2.670934 CACCACTCTGGCACTGGC 60.671 66.667 0.00 0.00 42.67 4.85
4643 6726 1.004080 CTCACCACTCTGGCACTGG 60.004 63.158 0.52 0.52 42.67 4.00
4644 6727 1.004080 CCTCACCACTCTGGCACTG 60.004 63.158 0.00 0.00 42.67 3.66
4645 6728 2.888447 GCCTCACCACTCTGGCACT 61.888 63.158 0.00 0.00 42.67 4.40
4646 6729 2.359230 GCCTCACCACTCTGGCAC 60.359 66.667 0.00 0.00 42.67 5.01
4648 6731 2.046507 CAGCCTCACCACTCTGGC 60.047 66.667 0.00 0.00 42.67 4.85
4649 6732 2.667418 CCAGCCTCACCACTCTGG 59.333 66.667 0.00 0.00 45.02 3.86
4650 6733 2.046507 GCCAGCCTCACCACTCTG 60.047 66.667 0.00 0.00 0.00 3.35
4651 6734 2.203907 AGCCAGCCTCACCACTCT 60.204 61.111 0.00 0.00 0.00 3.24
4652 6735 2.046507 CAGCCAGCCTCACCACTC 60.047 66.667 0.00 0.00 0.00 3.51
4653 6736 3.644606 CCAGCCAGCCTCACCACT 61.645 66.667 0.00 0.00 0.00 4.00
4657 6740 4.479993 ATCGCCAGCCAGCCTCAC 62.480 66.667 0.00 0.00 0.00 3.51
4663 6746 2.906182 TAAGACGCATCGCCAGCCAG 62.906 60.000 0.00 0.00 0.00 4.85
4664 6747 2.310327 ATAAGACGCATCGCCAGCCA 62.310 55.000 0.00 0.00 0.00 4.75
4665 6748 1.560860 GATAAGACGCATCGCCAGCC 61.561 60.000 0.00 0.00 0.00 4.85
4666 6749 0.598680 AGATAAGACGCATCGCCAGC 60.599 55.000 0.00 0.00 0.00 4.85
4667 6750 1.000827 AGAGATAAGACGCATCGCCAG 60.001 52.381 0.00 0.00 0.00 4.85
4668 6751 1.032794 AGAGATAAGACGCATCGCCA 58.967 50.000 0.00 0.00 0.00 5.69
4669 6752 1.001268 TCAGAGATAAGACGCATCGCC 60.001 52.381 0.00 0.00 0.00 5.54
4671 6754 3.617540 ACTCAGAGATAAGACGCATCG 57.382 47.619 3.79 0.00 0.00 3.84
4672 6755 4.915085 GCTAACTCAGAGATAAGACGCATC 59.085 45.833 3.79 0.00 0.00 3.91
4673 6756 4.582656 AGCTAACTCAGAGATAAGACGCAT 59.417 41.667 3.79 0.00 0.00 4.73
4674 6757 3.948473 AGCTAACTCAGAGATAAGACGCA 59.052 43.478 3.79 0.00 0.00 5.24
4675 6758 4.561735 AGCTAACTCAGAGATAAGACGC 57.438 45.455 3.79 0.00 0.00 5.19
4676 6759 5.885881 ACAAGCTAACTCAGAGATAAGACG 58.114 41.667 3.79 0.00 0.00 4.18
4677 6760 7.095695 AGACAAGCTAACTCAGAGATAAGAC 57.904 40.000 3.79 0.00 0.00 3.01
4678 6761 6.887002 TGAGACAAGCTAACTCAGAGATAAGA 59.113 38.462 3.79 0.00 36.04 2.10
4679 6762 7.094508 TGAGACAAGCTAACTCAGAGATAAG 57.905 40.000 3.79 0.00 36.04 1.73
4680 6763 7.177568 AGTTGAGACAAGCTAACTCAGAGATAA 59.822 37.037 3.79 1.16 40.82 1.75
4681 6764 6.661377 AGTTGAGACAAGCTAACTCAGAGATA 59.339 38.462 3.79 0.00 40.82 1.98
4682 6765 5.480073 AGTTGAGACAAGCTAACTCAGAGAT 59.520 40.000 3.79 0.00 40.82 2.75
4683 6766 4.830046 AGTTGAGACAAGCTAACTCAGAGA 59.170 41.667 3.79 2.24 40.82 3.10
4684 6767 5.132897 AGTTGAGACAAGCTAACTCAGAG 57.867 43.478 14.05 0.00 40.82 3.35
4685 6768 5.127693 GAGTTGAGACAAGCTAACTCAGA 57.872 43.478 16.42 7.35 45.08 3.27
4688 6771 4.688413 CCTTGAGTTGAGACAAGCTAACTC 59.312 45.833 15.03 15.03 45.64 3.01
4689 6772 4.345257 TCCTTGAGTTGAGACAAGCTAACT 59.655 41.667 0.00 0.00 41.15 2.24
4690 6773 4.632153 TCCTTGAGTTGAGACAAGCTAAC 58.368 43.478 0.00 0.00 41.15 2.34
4691 6774 4.955811 TCCTTGAGTTGAGACAAGCTAA 57.044 40.909 0.00 0.00 41.15 3.09
4692 6775 4.955811 TTCCTTGAGTTGAGACAAGCTA 57.044 40.909 0.00 0.00 41.15 3.32
4693 6776 3.845781 TTCCTTGAGTTGAGACAAGCT 57.154 42.857 0.00 0.00 41.15 3.74
4694 6777 6.560253 TTATTTCCTTGAGTTGAGACAAGC 57.440 37.500 0.00 0.00 41.15 4.01
4695 6778 8.383318 TCTTTATTTCCTTGAGTTGAGACAAG 57.617 34.615 0.00 0.00 41.85 3.16
4696 6779 8.786898 CATCTTTATTTCCTTGAGTTGAGACAA 58.213 33.333 0.00 0.00 0.00 3.18
4697 6780 7.939039 ACATCTTTATTTCCTTGAGTTGAGACA 59.061 33.333 0.00 0.00 0.00 3.41
4698 6781 8.233190 CACATCTTTATTTCCTTGAGTTGAGAC 58.767 37.037 0.00 0.00 0.00 3.36
4699 6782 7.939039 ACACATCTTTATTTCCTTGAGTTGAGA 59.061 33.333 0.00 0.00 0.00 3.27
4700 6783 8.103948 ACACATCTTTATTTCCTTGAGTTGAG 57.896 34.615 0.00 0.00 0.00 3.02
4701 6784 7.719193 TGACACATCTTTATTTCCTTGAGTTGA 59.281 33.333 0.00 0.00 0.00 3.18
4702 6785 7.874940 TGACACATCTTTATTTCCTTGAGTTG 58.125 34.615 0.00 0.00 0.00 3.16
4703 6786 8.641498 ATGACACATCTTTATTTCCTTGAGTT 57.359 30.769 0.00 0.00 0.00 3.01
4704 6787 8.641498 AATGACACATCTTTATTTCCTTGAGT 57.359 30.769 0.00 0.00 0.00 3.41
4705 6788 8.733458 TGAATGACACATCTTTATTTCCTTGAG 58.267 33.333 0.00 0.00 0.00 3.02
4706 6789 8.634335 TGAATGACACATCTTTATTTCCTTGA 57.366 30.769 0.00 0.00 0.00 3.02
4707 6790 7.972277 CCTGAATGACACATCTTTATTTCCTTG 59.028 37.037 0.00 0.00 0.00 3.61
4708 6791 7.890127 TCCTGAATGACACATCTTTATTTCCTT 59.110 33.333 0.00 0.00 0.00 3.36
4709 6792 7.405292 TCCTGAATGACACATCTTTATTTCCT 58.595 34.615 0.00 0.00 0.00 3.36
4710 6793 7.630242 TCCTGAATGACACATCTTTATTTCC 57.370 36.000 0.00 0.00 0.00 3.13
4711 6794 8.514594 TGTTCCTGAATGACACATCTTTATTTC 58.485 33.333 0.00 0.00 0.00 2.17
4712 6795 8.408043 TGTTCCTGAATGACACATCTTTATTT 57.592 30.769 0.00 0.00 0.00 1.40
4713 6796 7.884877 TCTGTTCCTGAATGACACATCTTTATT 59.115 33.333 0.00 0.00 0.00 1.40
4714 6797 7.397221 TCTGTTCCTGAATGACACATCTTTAT 58.603 34.615 0.00 0.00 0.00 1.40
4715 6798 6.768483 TCTGTTCCTGAATGACACATCTTTA 58.232 36.000 0.00 0.00 0.00 1.85
4716 6799 5.624159 TCTGTTCCTGAATGACACATCTTT 58.376 37.500 0.00 0.00 0.00 2.52
4717 6800 5.221803 ACTCTGTTCCTGAATGACACATCTT 60.222 40.000 0.00 0.00 0.00 2.40
4718 6801 4.285517 ACTCTGTTCCTGAATGACACATCT 59.714 41.667 0.00 0.00 0.00 2.90
4719 6802 4.573900 ACTCTGTTCCTGAATGACACATC 58.426 43.478 0.00 0.00 0.00 3.06
4720 6803 4.630644 ACTCTGTTCCTGAATGACACAT 57.369 40.909 0.00 0.00 0.00 3.21
4721 6804 5.745312 ATACTCTGTTCCTGAATGACACA 57.255 39.130 0.00 0.00 0.00 3.72
4722 6805 7.440523 AAAATACTCTGTTCCTGAATGACAC 57.559 36.000 0.00 0.00 0.00 3.67
4776 6866 9.998106 GCAGTTATAAGGAGATTAGGTTCAATA 57.002 33.333 0.00 0.00 0.00 1.90
4778 6868 7.857456 TGCAGTTATAAGGAGATTAGGTTCAA 58.143 34.615 0.00 0.00 0.00 2.69
4779 6869 7.432148 TGCAGTTATAAGGAGATTAGGTTCA 57.568 36.000 0.00 0.00 0.00 3.18
4780 6870 7.226918 GGTTGCAGTTATAAGGAGATTAGGTTC 59.773 40.741 0.00 0.00 0.00 3.62
4781 6871 7.054751 GGTTGCAGTTATAAGGAGATTAGGTT 58.945 38.462 0.00 0.00 0.00 3.50
4782 6872 6.409349 GGGTTGCAGTTATAAGGAGATTAGGT 60.409 42.308 0.00 0.00 0.00 3.08
4783 6873 5.998363 GGGTTGCAGTTATAAGGAGATTAGG 59.002 44.000 0.00 0.00 0.00 2.69
4784 6874 5.696724 CGGGTTGCAGTTATAAGGAGATTAG 59.303 44.000 0.00 0.00 0.00 1.73
4785 6875 5.454187 CCGGGTTGCAGTTATAAGGAGATTA 60.454 44.000 0.00 0.00 0.00 1.75
4786 6876 4.451900 CGGGTTGCAGTTATAAGGAGATT 58.548 43.478 0.00 0.00 0.00 2.40
4787 6877 3.181454 CCGGGTTGCAGTTATAAGGAGAT 60.181 47.826 0.00 0.00 0.00 2.75
4790 6880 1.910671 ACCGGGTTGCAGTTATAAGGA 59.089 47.619 6.32 0.00 0.00 3.36
4791 6881 2.093128 AGACCGGGTTGCAGTTATAAGG 60.093 50.000 6.32 0.00 0.00 2.69
4792 6882 3.261981 AGACCGGGTTGCAGTTATAAG 57.738 47.619 6.32 0.00 0.00 1.73
4793 6883 3.262405 AGAAGACCGGGTTGCAGTTATAA 59.738 43.478 6.32 0.00 0.00 0.98
4794 6884 2.835764 AGAAGACCGGGTTGCAGTTATA 59.164 45.455 6.32 0.00 0.00 0.98
4795 6885 1.628846 AGAAGACCGGGTTGCAGTTAT 59.371 47.619 6.32 0.00 0.00 1.89
4796 6886 1.053424 AGAAGACCGGGTTGCAGTTA 58.947 50.000 6.32 0.00 0.00 2.24
4820 6910 2.658064 GCCTGCAGAGCTCACTCCT 61.658 63.158 17.39 0.00 44.65 3.69
4821 6911 2.125188 GCCTGCAGAGCTCACTCC 60.125 66.667 17.39 1.20 44.65 3.85
4823 6931 1.003597 CAAGCCTGCAGAGCTCACT 60.004 57.895 24.11 10.83 40.49 3.41
4861 6980 0.105593 CACCGTCAGATCCATGGGAG 59.894 60.000 13.02 0.00 34.05 4.30
4864 6983 0.107508 AAGCACCGTCAGATCCATGG 60.108 55.000 4.97 4.97 0.00 3.66
4871 7002 0.033504 GGAGTTCAAGCACCGTCAGA 59.966 55.000 0.00 0.00 0.00 3.27
4874 7005 1.557443 CGTGGAGTTCAAGCACCGTC 61.557 60.000 0.00 0.00 0.00 4.79
4934 7065 9.026074 CCGAAAATGTGAGTTAAGCTTTAAAAA 57.974 29.630 3.20 0.00 0.00 1.94
4935 7066 7.650104 CCCGAAAATGTGAGTTAAGCTTTAAAA 59.350 33.333 3.20 0.00 0.00 1.52
4936 7067 7.013464 TCCCGAAAATGTGAGTTAAGCTTTAAA 59.987 33.333 3.20 0.00 0.00 1.52
4937 7068 6.487331 TCCCGAAAATGTGAGTTAAGCTTTAA 59.513 34.615 3.20 0.00 0.00 1.52
4938 7069 5.998981 TCCCGAAAATGTGAGTTAAGCTTTA 59.001 36.000 3.20 0.00 0.00 1.85
4939 7070 4.825085 TCCCGAAAATGTGAGTTAAGCTTT 59.175 37.500 3.20 0.00 0.00 3.51
4940 7071 4.394729 TCCCGAAAATGTGAGTTAAGCTT 58.605 39.130 3.48 3.48 0.00 3.74
4941 7072 4.003648 CTCCCGAAAATGTGAGTTAAGCT 58.996 43.478 0.00 0.00 0.00 3.74
4942 7073 3.426292 GCTCCCGAAAATGTGAGTTAAGC 60.426 47.826 0.00 0.00 0.00 3.09
4943 7074 3.181520 CGCTCCCGAAAATGTGAGTTAAG 60.182 47.826 0.00 0.00 36.29 1.85
4944 7075 2.739913 CGCTCCCGAAAATGTGAGTTAA 59.260 45.455 0.00 0.00 36.29 2.01
4945 7076 2.343101 CGCTCCCGAAAATGTGAGTTA 58.657 47.619 0.00 0.00 36.29 2.24
4946 7077 1.156736 CGCTCCCGAAAATGTGAGTT 58.843 50.000 0.00 0.00 36.29 3.01
4947 7078 0.673644 CCGCTCCCGAAAATGTGAGT 60.674 55.000 0.00 0.00 36.29 3.41
4948 7079 0.391130 TCCGCTCCCGAAAATGTGAG 60.391 55.000 0.00 0.00 36.29 3.51
4949 7080 0.251916 ATCCGCTCCCGAAAATGTGA 59.748 50.000 0.00 0.00 36.29 3.58
4950 7081 0.378257 CATCCGCTCCCGAAAATGTG 59.622 55.000 0.00 0.00 36.29 3.21
4951 7082 1.376609 GCATCCGCTCCCGAAAATGT 61.377 55.000 0.00 0.00 36.29 2.71
4952 7083 1.356624 GCATCCGCTCCCGAAAATG 59.643 57.895 0.00 0.00 36.29 2.32
4953 7084 3.827634 GCATCCGCTCCCGAAAAT 58.172 55.556 0.00 0.00 36.29 1.82
4970 7101 2.992543 GGCATATCTTTAGCTCGAGCAG 59.007 50.000 36.87 25.66 45.16 4.24
4971 7102 2.289072 GGGCATATCTTTAGCTCGAGCA 60.289 50.000 36.87 21.06 45.16 4.26
4972 7103 2.342179 GGGCATATCTTTAGCTCGAGC 58.658 52.381 30.01 30.01 42.49 5.03
4973 7104 2.354203 GGGGGCATATCTTTAGCTCGAG 60.354 54.545 8.45 8.45 0.00 4.04
4974 7105 1.623811 GGGGGCATATCTTTAGCTCGA 59.376 52.381 0.00 0.00 0.00 4.04
4975 7106 1.625818 AGGGGGCATATCTTTAGCTCG 59.374 52.381 0.00 0.00 0.00 5.03
4976 7107 4.287326 AGTTAGGGGGCATATCTTTAGCTC 59.713 45.833 0.00 0.00 0.00 4.09
4977 7108 4.243643 AGTTAGGGGGCATATCTTTAGCT 58.756 43.478 0.00 0.00 0.00 3.32
4978 7109 4.287326 AGAGTTAGGGGGCATATCTTTAGC 59.713 45.833 0.00 0.00 0.00 3.09
4979 7110 6.043243 TCAAGAGTTAGGGGGCATATCTTTAG 59.957 42.308 0.00 0.00 0.00 1.85
4980 7111 5.908831 TCAAGAGTTAGGGGGCATATCTTTA 59.091 40.000 0.00 0.00 0.00 1.85
4981 7112 4.726825 TCAAGAGTTAGGGGGCATATCTTT 59.273 41.667 0.00 0.00 0.00 2.52
4982 7113 4.307259 TCAAGAGTTAGGGGGCATATCTT 58.693 43.478 0.00 0.00 0.00 2.40
4983 7114 3.941629 TCAAGAGTTAGGGGGCATATCT 58.058 45.455 0.00 0.00 0.00 1.98
4984 7115 4.141482 TGTTCAAGAGTTAGGGGGCATATC 60.141 45.833 0.00 0.00 0.00 1.63
4985 7116 3.785887 TGTTCAAGAGTTAGGGGGCATAT 59.214 43.478 0.00 0.00 0.00 1.78
4986 7117 3.186283 TGTTCAAGAGTTAGGGGGCATA 58.814 45.455 0.00 0.00 0.00 3.14
4987 7118 1.992557 TGTTCAAGAGTTAGGGGGCAT 59.007 47.619 0.00 0.00 0.00 4.40
4988 7119 1.351017 CTGTTCAAGAGTTAGGGGGCA 59.649 52.381 0.00 0.00 0.00 5.36
4989 7120 1.950954 GCTGTTCAAGAGTTAGGGGGC 60.951 57.143 0.00 0.00 0.00 5.80
4990 7121 1.630878 AGCTGTTCAAGAGTTAGGGGG 59.369 52.381 0.00 0.00 0.00 5.40
4991 7122 2.355209 GGAGCTGTTCAAGAGTTAGGGG 60.355 54.545 0.00 0.00 0.00 4.79
4992 7123 2.355209 GGGAGCTGTTCAAGAGTTAGGG 60.355 54.545 0.00 0.00 0.00 3.53
4993 7124 2.303022 TGGGAGCTGTTCAAGAGTTAGG 59.697 50.000 0.00 0.00 0.00 2.69
4994 7125 3.007398 AGTGGGAGCTGTTCAAGAGTTAG 59.993 47.826 0.00 0.00 0.00 2.34
4995 7126 2.972713 AGTGGGAGCTGTTCAAGAGTTA 59.027 45.455 0.00 0.00 0.00 2.24
4996 7127 1.771255 AGTGGGAGCTGTTCAAGAGTT 59.229 47.619 0.00 0.00 0.00 3.01
4997 7128 1.428869 AGTGGGAGCTGTTCAAGAGT 58.571 50.000 0.00 0.00 0.00 3.24
4998 7129 2.551459 CAAAGTGGGAGCTGTTCAAGAG 59.449 50.000 0.00 0.00 0.00 2.85
4999 7130 2.575532 CAAAGTGGGAGCTGTTCAAGA 58.424 47.619 0.00 0.00 0.00 3.02
5000 7131 1.610522 CCAAAGTGGGAGCTGTTCAAG 59.389 52.381 0.00 0.00 32.67 3.02
5001 7132 1.691196 CCAAAGTGGGAGCTGTTCAA 58.309 50.000 0.00 0.00 32.67 2.69
5002 7133 0.823356 GCCAAAGTGGGAGCTGTTCA 60.823 55.000 0.00 0.00 38.19 3.18
5003 7134 1.527433 GGCCAAAGTGGGAGCTGTTC 61.527 60.000 0.00 0.00 38.19 3.18
5004 7135 1.531602 GGCCAAAGTGGGAGCTGTT 60.532 57.895 0.00 0.00 38.19 3.16
5005 7136 2.116125 GGCCAAAGTGGGAGCTGT 59.884 61.111 0.00 0.00 38.19 4.40
5006 7137 2.826777 ATCGGCCAAAGTGGGAGCTG 62.827 60.000 2.24 0.00 38.19 4.24
5007 7138 1.271840 TATCGGCCAAAGTGGGAGCT 61.272 55.000 2.24 0.00 38.19 4.09
5008 7139 0.179018 ATATCGGCCAAAGTGGGAGC 60.179 55.000 2.24 0.00 38.19 4.70
5009 7140 1.140852 TGATATCGGCCAAAGTGGGAG 59.859 52.381 2.24 0.00 38.19 4.30
5010 7141 1.208706 TGATATCGGCCAAAGTGGGA 58.791 50.000 2.24 0.00 38.19 4.37
5011 7142 2.051334 TTGATATCGGCCAAAGTGGG 57.949 50.000 2.24 0.00 38.19 4.61
5012 7143 3.016736 AGTTTGATATCGGCCAAAGTGG 58.983 45.455 2.24 0.00 41.55 4.00
5013 7144 4.155826 TCAAGTTTGATATCGGCCAAAGTG 59.844 41.667 2.24 0.00 36.42 3.16
5014 7145 4.156008 GTCAAGTTTGATATCGGCCAAAGT 59.844 41.667 2.24 0.00 39.73 2.66
5015 7146 4.662145 GTCAAGTTTGATATCGGCCAAAG 58.338 43.478 2.24 0.00 39.73 2.77
5016 7147 3.126171 CGTCAAGTTTGATATCGGCCAAA 59.874 43.478 2.24 0.00 39.73 3.28
5017 7148 2.675844 CGTCAAGTTTGATATCGGCCAA 59.324 45.455 2.24 0.00 39.73 4.52
5018 7149 2.276201 CGTCAAGTTTGATATCGGCCA 58.724 47.619 2.24 0.00 39.73 5.36
5019 7150 1.003866 GCGTCAAGTTTGATATCGGCC 60.004 52.381 0.00 0.00 39.73 6.13
5020 7151 1.933853 AGCGTCAAGTTTGATATCGGC 59.066 47.619 0.00 0.00 39.73 5.54
5021 7152 2.285834 GCAGCGTCAAGTTTGATATCGG 60.286 50.000 0.00 0.00 39.73 4.18
5022 7153 2.285834 GGCAGCGTCAAGTTTGATATCG 60.286 50.000 0.00 0.00 39.73 2.92
5023 7154 2.285834 CGGCAGCGTCAAGTTTGATATC 60.286 50.000 0.00 0.00 39.73 1.63
5024 7155 1.665679 CGGCAGCGTCAAGTTTGATAT 59.334 47.619 0.00 0.00 39.73 1.63
5025 7156 1.075542 CGGCAGCGTCAAGTTTGATA 58.924 50.000 0.00 0.00 39.73 2.15
5052 7183 3.959991 GACTTCAGGGTCGGCAGGC 62.960 68.421 0.00 0.00 0.00 4.85
5079 7210 0.109597 CAACAAGCCCGATTGCTCAC 60.110 55.000 0.00 0.00 41.80 3.51
5094 7228 0.466007 TGCTGCAGGAGAAAGCAACA 60.466 50.000 17.12 0.00 43.65 3.33
5125 7259 1.691976 CCCCTGTGAGTGAGTGTACAA 59.308 52.381 0.00 0.00 0.00 2.41
5174 7339 4.176120 CTGGCTAGGAGGAATCCATTTT 57.824 45.455 0.61 0.00 0.00 1.82
5235 7400 5.670485 TGTGTTGAGTTACTGACATCTTGT 58.330 37.500 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.