Multiple sequence alignment - TraesCS5A01G254900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G254900 chr5A 100.000 2414 0 0 1 2414 470675207 470672794 0.000000e+00 4458.0
1 TraesCS5A01G254900 chr5A 92.447 993 48 15 332 1317 470546488 470545516 0.000000e+00 1393.0
2 TraesCS5A01G254900 chr5A 81.818 1078 102 45 1375 2414 470545489 470544468 0.000000e+00 819.0
3 TraesCS5A01G254900 chr5A 85.985 792 66 20 1657 2414 470760151 470759371 0.000000e+00 806.0
4 TraesCS5A01G254900 chr5A 84.975 599 38 25 722 1317 470760981 470760432 7.100000e-156 560.0
5 TraesCS5A01G254900 chr5A 95.254 295 11 1 41 335 496612491 496612782 5.730000e-127 464.0
6 TraesCS5A01G254900 chr5A 94.558 294 12 2 42 335 480515800 480515511 4.460000e-123 451.0
7 TraesCS5A01G254900 chr5A 93.939 297 14 2 37 333 7025266 7025558 2.080000e-121 446.0
8 TraesCS5A01G254900 chr5A 92.787 305 19 1 33 337 14416373 14416072 3.470000e-119 438.0
9 TraesCS5A01G254900 chr5A 100.000 112 0 0 2824 2935 470672384 470672273 1.070000e-49 207.0
10 TraesCS5A01G254900 chr5A 90.441 136 13 0 1039 1174 471472377 471472512 2.320000e-41 180.0
11 TraesCS5A01G254900 chr5A 88.182 110 12 1 2827 2935 470759024 470758915 2.370000e-26 130.0
12 TraesCS5A01G254900 chr5A 87.692 65 8 0 1466 1530 470586894 470586830 3.140000e-10 76.8
13 TraesCS5A01G254900 chr5D 84.179 1340 152 35 716 2032 369034162 369035464 0.000000e+00 1245.0
14 TraesCS5A01G254900 chr5D 91.724 145 12 0 1037 1181 368827271 368827415 4.960000e-48 202.0
15 TraesCS5A01G254900 chr5D 88.957 163 14 3 1039 1200 368993164 368993323 6.420000e-47 198.0
16 TraesCS5A01G254900 chr5D 88.235 51 6 0 1480 1530 368989402 368989452 8.780000e-06 62.1
17 TraesCS5A01G254900 chr5B 83.958 1334 137 42 717 2030 437250369 437251645 0.000000e+00 1206.0
18 TraesCS5A01G254900 chr5B 83.453 278 28 12 2108 2371 437251657 437251930 2.920000e-60 243.0
19 TraesCS5A01G254900 chr5B 87.179 195 20 3 991 1181 436619045 436619238 1.770000e-52 217.0
20 TraesCS5A01G254900 chr5B 92.647 136 10 0 1039 1174 436552926 436553061 2.310000e-46 196.0
21 TraesCS5A01G254900 chr2A 95.904 293 9 1 43 335 324289832 324290121 3.420000e-129 472.0
22 TraesCS5A01G254900 chr2B 94.863 292 12 1 42 333 67921772 67922060 1.240000e-123 453.0
23 TraesCS5A01G254900 chr4B 94.276 297 13 2 37 333 565484239 565483947 4.460000e-123 451.0
24 TraesCS5A01G254900 chr7A 93.960 298 15 1 41 338 75400660 75400366 5.770000e-122 448.0
25 TraesCS5A01G254900 chr4A 93.399 303 16 2 34 335 354397363 354397064 2.080000e-121 446.0
26 TraesCS5A01G254900 chr6D 92.105 38 3 0 681 718 399021104 399021141 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G254900 chr5A 470672273 470675207 2934 True 2332.500000 4458 100.000000 1 2935 2 chr5A.!!$R5 2934
1 TraesCS5A01G254900 chr5A 470544468 470546488 2020 True 1106.000000 1393 87.132500 332 2414 2 chr5A.!!$R4 2082
2 TraesCS5A01G254900 chr5A 470758915 470760981 2066 True 498.666667 806 86.380667 722 2935 3 chr5A.!!$R6 2213
3 TraesCS5A01G254900 chr5D 369034162 369035464 1302 False 1245.000000 1245 84.179000 716 2032 1 chr5D.!!$F2 1316
4 TraesCS5A01G254900 chr5B 437250369 437251930 1561 False 724.500000 1206 83.705500 717 2371 2 chr5B.!!$F3 1654

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
206 207 0.106769 TTCACCTTGGAGCTTGTGCA 60.107 50.0 0.0 0.0 42.74 4.57 F
889 892 0.179000 CCTTGATCTCCCTTCCACGG 59.821 60.0 0.0 0.0 0.00 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1361 1378 0.038251 CGCTGTAGTTGTGGCTCAGA 60.038 55.0 0.0 0.0 0.00 3.27 R
2859 2962 0.034896 AACTTGCGGACGTCCAATCT 59.965 50.0 32.8 10.0 35.14 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.309950 ACTCCCGCCGTTCGCTTT 62.310 61.111 0.00 0.00 36.73 3.51
18 19 3.047877 CTCCCGCCGTTCGCTTTT 61.048 61.111 0.00 0.00 36.73 2.27
19 20 1.738830 CTCCCGCCGTTCGCTTTTA 60.739 57.895 0.00 0.00 36.73 1.52
20 21 1.078988 TCCCGCCGTTCGCTTTTAT 60.079 52.632 0.00 0.00 36.73 1.40
21 22 0.175302 TCCCGCCGTTCGCTTTTATA 59.825 50.000 0.00 0.00 36.73 0.98
22 23 0.580104 CCCGCCGTTCGCTTTTATAG 59.420 55.000 0.00 0.00 36.73 1.31
23 24 1.283736 CCGCCGTTCGCTTTTATAGT 58.716 50.000 0.00 0.00 36.73 2.12
24 25 1.005347 CCGCCGTTCGCTTTTATAGTG 60.005 52.381 0.00 0.00 36.73 2.74
25 26 1.591394 CGCCGTTCGCTTTTATAGTGC 60.591 52.381 0.00 0.00 34.27 4.40
32 33 3.991605 CGCTTTTATAGTGCGTCTTGT 57.008 42.857 0.00 0.00 44.00 3.16
33 34 4.322101 CGCTTTTATAGTGCGTCTTGTT 57.678 40.909 0.00 0.00 44.00 2.83
34 35 4.708601 CGCTTTTATAGTGCGTCTTGTTT 58.291 39.130 0.00 0.00 44.00 2.83
35 36 4.549599 CGCTTTTATAGTGCGTCTTGTTTG 59.450 41.667 0.00 0.00 44.00 2.93
36 37 5.449304 GCTTTTATAGTGCGTCTTGTTTGT 58.551 37.500 0.00 0.00 0.00 2.83
37 38 5.339611 GCTTTTATAGTGCGTCTTGTTTGTG 59.660 40.000 0.00 0.00 0.00 3.33
38 39 6.606234 TTTTATAGTGCGTCTTGTTTGTGA 57.394 33.333 0.00 0.00 0.00 3.58
39 40 5.585500 TTATAGTGCGTCTTGTTTGTGAC 57.415 39.130 0.00 0.00 0.00 3.67
40 41 1.732941 AGTGCGTCTTGTTTGTGACA 58.267 45.000 0.00 0.00 36.19 3.58
41 42 1.396996 AGTGCGTCTTGTTTGTGACAC 59.603 47.619 0.00 0.00 38.18 3.67
42 43 1.396996 GTGCGTCTTGTTTGTGACACT 59.603 47.619 7.20 0.00 38.18 3.55
43 44 2.080693 TGCGTCTTGTTTGTGACACTT 58.919 42.857 7.20 0.00 38.18 3.16
44 45 3.062909 GTGCGTCTTGTTTGTGACACTTA 59.937 43.478 7.20 0.00 38.18 2.24
45 46 3.308595 TGCGTCTTGTTTGTGACACTTAG 59.691 43.478 7.20 0.00 38.18 2.18
46 47 3.303132 GCGTCTTGTTTGTGACACTTAGG 60.303 47.826 7.20 0.00 38.18 2.69
47 48 3.247648 CGTCTTGTTTGTGACACTTAGGG 59.752 47.826 7.20 0.00 38.18 3.53
48 49 3.003378 GTCTTGTTTGTGACACTTAGGGC 59.997 47.826 7.20 0.00 38.18 5.19
49 50 2.719531 TGTTTGTGACACTTAGGGCA 57.280 45.000 7.20 0.00 32.00 5.36
50 51 3.222173 TGTTTGTGACACTTAGGGCAT 57.778 42.857 7.20 0.00 32.00 4.40
51 52 3.146066 TGTTTGTGACACTTAGGGCATC 58.854 45.455 7.20 0.00 32.00 3.91
52 53 3.181445 TGTTTGTGACACTTAGGGCATCT 60.181 43.478 7.20 0.00 32.00 2.90
53 54 3.788227 TTGTGACACTTAGGGCATCTT 57.212 42.857 7.20 0.00 0.00 2.40
54 55 3.334583 TGTGACACTTAGGGCATCTTC 57.665 47.619 7.20 0.00 0.00 2.87
55 56 2.637382 TGTGACACTTAGGGCATCTTCA 59.363 45.455 7.20 0.00 0.00 3.02
56 57 3.072330 TGTGACACTTAGGGCATCTTCAA 59.928 43.478 7.20 0.00 0.00 2.69
57 58 4.263462 TGTGACACTTAGGGCATCTTCAAT 60.263 41.667 7.20 0.00 0.00 2.57
58 59 5.045942 TGTGACACTTAGGGCATCTTCAATA 60.046 40.000 7.20 0.00 0.00 1.90
59 60 5.525378 GTGACACTTAGGGCATCTTCAATAG 59.475 44.000 0.00 0.00 0.00 1.73
60 61 5.425217 TGACACTTAGGGCATCTTCAATAGA 59.575 40.000 0.00 0.00 37.28 1.98
61 62 6.100279 TGACACTTAGGGCATCTTCAATAGAT 59.900 38.462 0.00 0.00 44.60 1.98
62 63 6.904626 ACACTTAGGGCATCTTCAATAGATT 58.095 36.000 0.00 0.00 41.78 2.40
63 64 6.769822 ACACTTAGGGCATCTTCAATAGATTG 59.230 38.462 0.00 0.00 41.78 2.67
64 65 6.769822 CACTTAGGGCATCTTCAATAGATTGT 59.230 38.462 2.32 0.00 41.78 2.71
65 66 7.933577 CACTTAGGGCATCTTCAATAGATTGTA 59.066 37.037 2.32 0.00 41.78 2.41
66 67 8.664079 ACTTAGGGCATCTTCAATAGATTGTAT 58.336 33.333 2.32 0.00 41.78 2.29
67 68 8.853077 TTAGGGCATCTTCAATAGATTGTATG 57.147 34.615 2.32 6.44 41.78 2.39
68 69 6.845908 AGGGCATCTTCAATAGATTGTATGT 58.154 36.000 2.32 0.00 41.78 2.29
69 70 7.293073 AGGGCATCTTCAATAGATTGTATGTT 58.707 34.615 2.32 0.00 41.78 2.71
70 71 8.439971 AGGGCATCTTCAATAGATTGTATGTTA 58.560 33.333 2.32 0.00 41.78 2.41
71 72 8.725148 GGGCATCTTCAATAGATTGTATGTTAG 58.275 37.037 2.32 0.00 41.78 2.34
72 73 9.277783 GGCATCTTCAATAGATTGTATGTTAGT 57.722 33.333 2.32 0.00 41.78 2.24
81 82 9.959721 AATAGATTGTATGTTAGTCTTGTTGGT 57.040 29.630 0.00 0.00 0.00 3.67
84 85 9.787435 AGATTGTATGTTAGTCTTGTTGGTAAA 57.213 29.630 0.00 0.00 0.00 2.01
88 89 9.344772 TGTATGTTAGTCTTGTTGGTAAAATGT 57.655 29.630 0.00 0.00 0.00 2.71
91 92 8.282455 TGTTAGTCTTGTTGGTAAAATGTTCA 57.718 30.769 0.00 0.00 0.00 3.18
92 93 8.908903 TGTTAGTCTTGTTGGTAAAATGTTCAT 58.091 29.630 0.00 0.00 0.00 2.57
93 94 9.180678 GTTAGTCTTGTTGGTAAAATGTTCATG 57.819 33.333 0.00 0.00 0.00 3.07
94 95 7.346751 AGTCTTGTTGGTAAAATGTTCATGT 57.653 32.000 0.00 0.00 0.00 3.21
95 96 7.425606 AGTCTTGTTGGTAAAATGTTCATGTC 58.574 34.615 0.00 0.00 0.00 3.06
96 97 7.068103 AGTCTTGTTGGTAAAATGTTCATGTCA 59.932 33.333 0.00 0.00 0.00 3.58
97 98 7.867403 GTCTTGTTGGTAAAATGTTCATGTCAT 59.133 33.333 0.00 0.00 0.00 3.06
98 99 8.081633 TCTTGTTGGTAAAATGTTCATGTCATC 58.918 33.333 0.00 0.00 0.00 2.92
99 100 7.282332 TGTTGGTAAAATGTTCATGTCATCA 57.718 32.000 0.00 0.00 0.00 3.07
100 101 7.720442 TGTTGGTAAAATGTTCATGTCATCAA 58.280 30.769 0.00 0.00 0.00 2.57
101 102 7.651304 TGTTGGTAAAATGTTCATGTCATCAAC 59.349 33.333 17.18 17.18 31.65 3.18
102 103 6.686630 TGGTAAAATGTTCATGTCATCAACC 58.313 36.000 0.00 15.72 0.00 3.77
103 104 6.266330 TGGTAAAATGTTCATGTCATCAACCA 59.734 34.615 18.33 18.33 33.29 3.67
104 105 7.151308 GGTAAAATGTTCATGTCATCAACCAA 58.849 34.615 0.00 0.00 0.00 3.67
105 106 7.116233 GGTAAAATGTTCATGTCATCAACCAAC 59.884 37.037 0.00 5.01 0.00 3.77
106 107 5.787953 AATGTTCATGTCATCAACCAACA 57.212 34.783 0.00 0.00 0.00 3.33
107 108 5.787953 ATGTTCATGTCATCAACCAACAA 57.212 34.783 0.00 0.00 30.19 2.83
108 109 5.185668 TGTTCATGTCATCAACCAACAAG 57.814 39.130 0.00 0.00 0.00 3.16
109 110 3.921119 TCATGTCATCAACCAACAAGC 57.079 42.857 0.00 0.00 0.00 4.01
110 111 3.489355 TCATGTCATCAACCAACAAGCT 58.511 40.909 0.00 0.00 0.00 3.74
111 112 4.650734 TCATGTCATCAACCAACAAGCTA 58.349 39.130 0.00 0.00 0.00 3.32
112 113 5.255687 TCATGTCATCAACCAACAAGCTAT 58.744 37.500 0.00 0.00 0.00 2.97
113 114 5.355071 TCATGTCATCAACCAACAAGCTATC 59.645 40.000 0.00 0.00 0.00 2.08
114 115 4.650734 TGTCATCAACCAACAAGCTATCA 58.349 39.130 0.00 0.00 0.00 2.15
115 116 5.255687 TGTCATCAACCAACAAGCTATCAT 58.744 37.500 0.00 0.00 0.00 2.45
116 117 6.413892 TGTCATCAACCAACAAGCTATCATA 58.586 36.000 0.00 0.00 0.00 2.15
117 118 6.316140 TGTCATCAACCAACAAGCTATCATAC 59.684 38.462 0.00 0.00 0.00 2.39
118 119 6.316140 GTCATCAACCAACAAGCTATCATACA 59.684 38.462 0.00 0.00 0.00 2.29
119 120 6.883756 TCATCAACCAACAAGCTATCATACAA 59.116 34.615 0.00 0.00 0.00 2.41
120 121 6.494893 TCAACCAACAAGCTATCATACAAC 57.505 37.500 0.00 0.00 0.00 3.32
121 122 6.237901 TCAACCAACAAGCTATCATACAACT 58.762 36.000 0.00 0.00 0.00 3.16
122 123 7.390823 TCAACCAACAAGCTATCATACAACTA 58.609 34.615 0.00 0.00 0.00 2.24
123 124 7.880713 TCAACCAACAAGCTATCATACAACTAA 59.119 33.333 0.00 0.00 0.00 2.24
124 125 8.677300 CAACCAACAAGCTATCATACAACTAAT 58.323 33.333 0.00 0.00 0.00 1.73
125 126 8.438676 ACCAACAAGCTATCATACAACTAATC 57.561 34.615 0.00 0.00 0.00 1.75
126 127 7.499232 ACCAACAAGCTATCATACAACTAATCC 59.501 37.037 0.00 0.00 0.00 3.01
127 128 7.498900 CCAACAAGCTATCATACAACTAATCCA 59.501 37.037 0.00 0.00 0.00 3.41
128 129 8.892723 CAACAAGCTATCATACAACTAATCCAA 58.107 33.333 0.00 0.00 0.00 3.53
129 130 9.632638 AACAAGCTATCATACAACTAATCCAAT 57.367 29.630 0.00 0.00 0.00 3.16
130 131 9.060347 ACAAGCTATCATACAACTAATCCAATG 57.940 33.333 0.00 0.00 0.00 2.82
131 132 8.509690 CAAGCTATCATACAACTAATCCAATGG 58.490 37.037 0.00 0.00 0.00 3.16
132 133 7.170965 AGCTATCATACAACTAATCCAATGGG 58.829 38.462 0.00 0.00 0.00 4.00
133 134 6.942576 GCTATCATACAACTAATCCAATGGGT 59.057 38.462 0.00 0.00 34.93 4.51
134 135 7.448469 GCTATCATACAACTAATCCAATGGGTT 59.552 37.037 2.29 2.29 34.93 4.11
135 136 7.587037 ATCATACAACTAATCCAATGGGTTG 57.413 36.000 8.27 12.19 41.75 3.77
140 141 6.731467 ACAACTAATCCAATGGGTTGTATCT 58.269 36.000 18.64 0.32 45.35 1.98
141 142 7.867921 ACAACTAATCCAATGGGTTGTATCTA 58.132 34.615 18.64 0.00 45.35 1.98
142 143 8.333235 ACAACTAATCCAATGGGTTGTATCTAA 58.667 33.333 18.64 0.00 45.35 2.10
143 144 8.840321 CAACTAATCCAATGGGTTGTATCTAAG 58.160 37.037 8.27 0.00 34.44 2.18
144 145 7.518188 ACTAATCCAATGGGTTGTATCTAAGG 58.482 38.462 8.27 0.00 33.36 2.69
145 146 5.994416 ATCCAATGGGTTGTATCTAAGGT 57.006 39.130 0.00 0.00 33.36 3.50
146 147 7.460214 AATCCAATGGGTTGTATCTAAGGTA 57.540 36.000 0.00 0.00 33.36 3.08
147 148 7.648177 ATCCAATGGGTTGTATCTAAGGTAT 57.352 36.000 0.00 0.00 33.36 2.73
148 149 7.074653 TCCAATGGGTTGTATCTAAGGTATC 57.925 40.000 0.00 0.00 33.36 2.24
149 150 6.043938 TCCAATGGGTTGTATCTAAGGTATCC 59.956 42.308 0.00 0.00 33.36 2.59
150 151 6.183361 CCAATGGGTTGTATCTAAGGTATCCA 60.183 42.308 0.00 0.00 33.36 3.41
151 152 7.287061 CAATGGGTTGTATCTAAGGTATCCAA 58.713 38.462 0.00 0.00 0.00 3.53
152 153 7.648177 ATGGGTTGTATCTAAGGTATCCAAT 57.352 36.000 0.00 0.00 0.00 3.16
153 154 8.751215 ATGGGTTGTATCTAAGGTATCCAATA 57.249 34.615 0.00 0.00 0.00 1.90
154 155 8.202461 TGGGTTGTATCTAAGGTATCCAATAG 57.798 38.462 0.00 0.00 0.00 1.73
155 156 8.014263 TGGGTTGTATCTAAGGTATCCAATAGA 58.986 37.037 0.00 0.00 31.93 1.98
156 157 9.047947 GGGTTGTATCTAAGGTATCCAATAGAT 57.952 37.037 14.09 14.09 38.03 1.98
157 158 9.877178 GGTTGTATCTAAGGTATCCAATAGATG 57.123 37.037 16.85 0.00 36.39 2.90
164 165 9.828691 TCTAAGGTATCCAATAGATGATGAGAA 57.171 33.333 0.00 0.00 36.33 2.87
179 180 9.745880 AGATGATGAGAAAATAAATGTGATTGC 57.254 29.630 0.00 0.00 0.00 3.56
180 181 9.745880 GATGATGAGAAAATAAATGTGATTGCT 57.254 29.630 0.00 0.00 0.00 3.91
181 182 9.745880 ATGATGAGAAAATAAATGTGATTGCTC 57.254 29.630 0.00 0.00 0.00 4.26
182 183 8.963725 TGATGAGAAAATAAATGTGATTGCTCT 58.036 29.630 0.00 0.00 0.00 4.09
183 184 9.448294 GATGAGAAAATAAATGTGATTGCTCTC 57.552 33.333 0.00 0.00 32.12 3.20
184 185 8.571461 TGAGAAAATAAATGTGATTGCTCTCT 57.429 30.769 0.00 0.00 32.42 3.10
185 186 9.671279 TGAGAAAATAAATGTGATTGCTCTCTA 57.329 29.630 0.00 0.00 32.42 2.43
192 193 6.690194 AATGTGATTGCTCTCTATTTCACC 57.310 37.500 0.00 0.00 34.11 4.02
193 194 5.426689 TGTGATTGCTCTCTATTTCACCT 57.573 39.130 0.00 0.00 34.11 4.00
194 195 5.809001 TGTGATTGCTCTCTATTTCACCTT 58.191 37.500 0.00 0.00 34.11 3.50
195 196 5.645067 TGTGATTGCTCTCTATTTCACCTTG 59.355 40.000 0.00 0.00 34.11 3.61
196 197 5.065731 GTGATTGCTCTCTATTTCACCTTGG 59.934 44.000 0.00 0.00 0.00 3.61
197 198 4.908601 TTGCTCTCTATTTCACCTTGGA 57.091 40.909 0.00 0.00 0.00 3.53
198 199 4.478206 TGCTCTCTATTTCACCTTGGAG 57.522 45.455 0.00 0.00 0.00 3.86
199 200 3.202097 GCTCTCTATTTCACCTTGGAGC 58.798 50.000 0.00 0.00 38.17 4.70
200 201 3.118445 GCTCTCTATTTCACCTTGGAGCT 60.118 47.826 0.00 0.00 40.87 4.09
201 202 4.625083 GCTCTCTATTTCACCTTGGAGCTT 60.625 45.833 0.00 0.00 40.87 3.74
202 203 4.836825 TCTCTATTTCACCTTGGAGCTTG 58.163 43.478 0.00 0.00 0.00 4.01
203 204 4.287067 TCTCTATTTCACCTTGGAGCTTGT 59.713 41.667 0.00 0.00 0.00 3.16
204 205 4.326826 TCTATTTCACCTTGGAGCTTGTG 58.673 43.478 0.00 0.00 0.00 3.33
205 206 1.032014 TTTCACCTTGGAGCTTGTGC 58.968 50.000 0.00 0.00 40.05 4.57
206 207 0.106769 TTCACCTTGGAGCTTGTGCA 60.107 50.000 0.00 0.00 42.74 4.57
207 208 0.106769 TCACCTTGGAGCTTGTGCAA 60.107 50.000 0.00 0.00 42.74 4.08
208 209 0.746063 CACCTTGGAGCTTGTGCAAA 59.254 50.000 0.00 0.00 42.74 3.68
209 210 1.035139 ACCTTGGAGCTTGTGCAAAG 58.965 50.000 0.00 0.00 42.74 2.77
210 211 0.316204 CCTTGGAGCTTGTGCAAAGG 59.684 55.000 9.63 3.57 42.74 3.11
211 212 1.035139 CTTGGAGCTTGTGCAAAGGT 58.965 50.000 11.42 11.42 42.74 3.50
212 213 1.410153 CTTGGAGCTTGTGCAAAGGTT 59.590 47.619 12.42 0.00 42.74 3.50
213 214 2.356665 TGGAGCTTGTGCAAAGGTTA 57.643 45.000 12.42 5.34 42.74 2.85
214 215 2.875296 TGGAGCTTGTGCAAAGGTTAT 58.125 42.857 12.42 0.00 42.74 1.89
215 216 3.230134 TGGAGCTTGTGCAAAGGTTATT 58.770 40.909 12.42 0.00 42.74 1.40
216 217 3.005684 TGGAGCTTGTGCAAAGGTTATTG 59.994 43.478 12.42 0.00 42.74 1.90
217 218 3.578688 GAGCTTGTGCAAAGGTTATTGG 58.421 45.455 12.42 0.00 42.74 3.16
218 219 2.965147 AGCTTGTGCAAAGGTTATTGGT 59.035 40.909 7.29 0.00 42.74 3.67
219 220 3.387699 AGCTTGTGCAAAGGTTATTGGTT 59.612 39.130 7.29 0.00 42.74 3.67
220 221 4.586841 AGCTTGTGCAAAGGTTATTGGTTA 59.413 37.500 7.29 0.00 42.74 2.85
221 222 5.245977 AGCTTGTGCAAAGGTTATTGGTTAT 59.754 36.000 7.29 0.00 42.74 1.89
222 223 5.931724 GCTTGTGCAAAGGTTATTGGTTATT 59.068 36.000 9.63 0.00 39.41 1.40
223 224 6.090763 GCTTGTGCAAAGGTTATTGGTTATTC 59.909 38.462 9.63 0.00 39.41 1.75
224 225 6.909550 TGTGCAAAGGTTATTGGTTATTCT 57.090 33.333 0.00 0.00 0.00 2.40
225 226 8.410673 TTGTGCAAAGGTTATTGGTTATTCTA 57.589 30.769 0.00 0.00 0.00 2.10
226 227 7.822658 TGTGCAAAGGTTATTGGTTATTCTAC 58.177 34.615 0.00 0.00 0.00 2.59
227 228 7.448777 TGTGCAAAGGTTATTGGTTATTCTACA 59.551 33.333 0.00 0.00 0.00 2.74
228 229 8.466798 GTGCAAAGGTTATTGGTTATTCTACAT 58.533 33.333 0.00 0.00 0.00 2.29
229 230 9.688091 TGCAAAGGTTATTGGTTATTCTACATA 57.312 29.630 0.00 0.00 0.00 2.29
247 248 9.587772 TTCTACATAGTACAATTTTGCTCTCTC 57.412 33.333 0.00 0.00 0.00 3.20
248 249 8.972127 TCTACATAGTACAATTTTGCTCTCTCT 58.028 33.333 0.00 0.00 0.00 3.10
249 250 9.243637 CTACATAGTACAATTTTGCTCTCTCTC 57.756 37.037 0.00 0.00 0.00 3.20
250 251 7.044798 ACATAGTACAATTTTGCTCTCTCTCC 58.955 38.462 0.00 0.00 0.00 3.71
251 252 5.489792 AGTACAATTTTGCTCTCTCTCCA 57.510 39.130 0.00 0.00 0.00 3.86
252 253 5.241662 AGTACAATTTTGCTCTCTCTCCAC 58.758 41.667 0.00 0.00 0.00 4.02
253 254 4.090761 ACAATTTTGCTCTCTCTCCACA 57.909 40.909 0.00 0.00 0.00 4.17
254 255 4.660168 ACAATTTTGCTCTCTCTCCACAT 58.340 39.130 0.00 0.00 0.00 3.21
255 256 5.075493 ACAATTTTGCTCTCTCTCCACATT 58.925 37.500 0.00 0.00 0.00 2.71
256 257 5.537674 ACAATTTTGCTCTCTCTCCACATTT 59.462 36.000 0.00 0.00 0.00 2.32
257 258 6.716628 ACAATTTTGCTCTCTCTCCACATTTA 59.283 34.615 0.00 0.00 0.00 1.40
258 259 7.395489 ACAATTTTGCTCTCTCTCCACATTTAT 59.605 33.333 0.00 0.00 0.00 1.40
259 260 7.951347 ATTTTGCTCTCTCTCCACATTTATT 57.049 32.000 0.00 0.00 0.00 1.40
260 261 9.466497 AATTTTGCTCTCTCTCCACATTTATTA 57.534 29.630 0.00 0.00 0.00 0.98
261 262 7.849804 TTTGCTCTCTCTCCACATTTATTAC 57.150 36.000 0.00 0.00 0.00 1.89
262 263 6.544928 TGCTCTCTCTCCACATTTATTACA 57.455 37.500 0.00 0.00 0.00 2.41
263 264 7.129457 TGCTCTCTCTCCACATTTATTACAT 57.871 36.000 0.00 0.00 0.00 2.29
264 265 6.988580 TGCTCTCTCTCCACATTTATTACATG 59.011 38.462 0.00 0.00 0.00 3.21
265 266 6.073331 GCTCTCTCTCCACATTTATTACATGC 60.073 42.308 0.00 0.00 0.00 4.06
266 267 6.291377 TCTCTCTCCACATTTATTACATGCC 58.709 40.000 0.00 0.00 0.00 4.40
267 268 6.000246 TCTCTCCACATTTATTACATGCCA 58.000 37.500 0.00 0.00 0.00 4.92
268 269 5.822519 TCTCTCCACATTTATTACATGCCAC 59.177 40.000 0.00 0.00 0.00 5.01
269 270 5.504853 TCTCCACATTTATTACATGCCACA 58.495 37.500 0.00 0.00 0.00 4.17
270 271 6.128486 TCTCCACATTTATTACATGCCACAT 58.872 36.000 0.00 0.00 0.00 3.21
271 272 6.262944 TCTCCACATTTATTACATGCCACATC 59.737 38.462 0.00 0.00 0.00 3.06
272 273 5.890419 TCCACATTTATTACATGCCACATCA 59.110 36.000 0.00 0.00 0.00 3.07
273 274 6.550481 TCCACATTTATTACATGCCACATCAT 59.450 34.615 0.00 0.00 0.00 2.45
274 275 6.864685 CCACATTTATTACATGCCACATCATC 59.135 38.462 0.00 0.00 0.00 2.92
275 276 7.427214 CACATTTATTACATGCCACATCATCA 58.573 34.615 0.00 0.00 0.00 3.07
276 277 7.921745 CACATTTATTACATGCCACATCATCAA 59.078 33.333 0.00 0.00 0.00 2.57
277 278 8.644216 ACATTTATTACATGCCACATCATCAAT 58.356 29.630 0.00 0.00 0.00 2.57
281 282 7.770366 ATTACATGCCACATCATCAATATGT 57.230 32.000 0.00 0.00 38.08 2.29
282 283 5.700722 ACATGCCACATCATCAATATGTC 57.299 39.130 0.00 0.00 35.39 3.06
283 284 4.521639 ACATGCCACATCATCAATATGTCC 59.478 41.667 0.00 0.00 35.39 4.02
284 285 4.442401 TGCCACATCATCAATATGTCCT 57.558 40.909 0.00 0.00 35.39 3.85
285 286 5.565455 TGCCACATCATCAATATGTCCTA 57.435 39.130 0.00 0.00 35.39 2.94
286 287 5.554070 TGCCACATCATCAATATGTCCTAG 58.446 41.667 0.00 0.00 35.39 3.02
287 288 5.307716 TGCCACATCATCAATATGTCCTAGA 59.692 40.000 0.00 0.00 35.39 2.43
288 289 6.013119 TGCCACATCATCAATATGTCCTAGAT 60.013 38.462 0.00 0.00 35.39 1.98
289 290 6.315642 GCCACATCATCAATATGTCCTAGATG 59.684 42.308 0.00 0.00 35.39 2.90
290 291 6.822170 CCACATCATCAATATGTCCTAGATGG 59.178 42.308 0.00 0.00 35.39 3.51
291 292 6.315642 CACATCATCAATATGTCCTAGATGGC 59.684 42.308 0.00 0.00 35.39 4.40
292 293 6.013119 ACATCATCAATATGTCCTAGATGGCA 60.013 38.462 0.00 0.00 37.33 4.92
293 294 6.438186 TCATCAATATGTCCTAGATGGCAA 57.562 37.500 0.00 0.00 37.33 4.52
294 295 6.840527 TCATCAATATGTCCTAGATGGCAAA 58.159 36.000 0.00 0.00 37.33 3.68
295 296 7.464273 TCATCAATATGTCCTAGATGGCAAAT 58.536 34.615 0.00 0.00 37.33 2.32
296 297 7.946219 TCATCAATATGTCCTAGATGGCAAATT 59.054 33.333 0.00 0.00 37.33 1.82
297 298 8.582437 CATCAATATGTCCTAGATGGCAAATTT 58.418 33.333 0.00 0.00 34.07 1.82
298 299 9.812347 ATCAATATGTCCTAGATGGCAAATTTA 57.188 29.630 0.00 0.00 35.26 1.40
299 300 9.812347 TCAATATGTCCTAGATGGCAAATTTAT 57.188 29.630 0.00 0.00 35.26 1.40
301 302 9.812347 AATATGTCCTAGATGGCAAATTTATCA 57.188 29.630 0.00 0.00 35.26 2.15
302 303 9.812347 ATATGTCCTAGATGGCAAATTTATCAA 57.188 29.630 0.00 0.00 35.26 2.57
303 304 7.333528 TGTCCTAGATGGCAAATTTATCAAC 57.666 36.000 0.00 0.00 35.26 3.18
304 305 6.889177 TGTCCTAGATGGCAAATTTATCAACA 59.111 34.615 0.00 0.00 35.26 3.33
305 306 7.148086 TGTCCTAGATGGCAAATTTATCAACAC 60.148 37.037 0.00 0.00 35.26 3.32
306 307 6.321181 TCCTAGATGGCAAATTTATCAACACC 59.679 38.462 0.00 0.00 35.26 4.16
307 308 6.322201 CCTAGATGGCAAATTTATCAACACCT 59.678 38.462 0.00 0.00 0.00 4.00
308 309 7.502226 CCTAGATGGCAAATTTATCAACACCTA 59.498 37.037 0.00 0.00 0.00 3.08
309 310 7.902920 AGATGGCAAATTTATCAACACCTAT 57.097 32.000 0.00 0.00 0.00 2.57
310 311 7.945134 AGATGGCAAATTTATCAACACCTATC 58.055 34.615 0.00 0.00 0.00 2.08
311 312 7.781693 AGATGGCAAATTTATCAACACCTATCT 59.218 33.333 0.00 0.00 0.00 1.98
312 313 7.716799 TGGCAAATTTATCAACACCTATCTT 57.283 32.000 0.00 0.00 0.00 2.40
313 314 8.815565 TGGCAAATTTATCAACACCTATCTTA 57.184 30.769 0.00 0.00 0.00 2.10
314 315 8.682710 TGGCAAATTTATCAACACCTATCTTAC 58.317 33.333 0.00 0.00 0.00 2.34
315 316 8.682710 GGCAAATTTATCAACACCTATCTTACA 58.317 33.333 0.00 0.00 0.00 2.41
316 317 9.722056 GCAAATTTATCAACACCTATCTTACAG 57.278 33.333 0.00 0.00 0.00 2.74
317 318 9.722056 CAAATTTATCAACACCTATCTTACAGC 57.278 33.333 0.00 0.00 0.00 4.40
318 319 9.686683 AAATTTATCAACACCTATCTTACAGCT 57.313 29.630 0.00 0.00 0.00 4.24
319 320 8.668510 ATTTATCAACACCTATCTTACAGCTG 57.331 34.615 13.48 13.48 0.00 4.24
320 321 5.683876 ATCAACACCTATCTTACAGCTGT 57.316 39.130 25.12 25.12 0.00 4.40
321 322 5.483685 TCAACACCTATCTTACAGCTGTT 57.516 39.130 27.06 9.59 0.00 3.16
322 323 5.237815 TCAACACCTATCTTACAGCTGTTG 58.762 41.667 27.06 16.61 38.78 3.33
323 324 4.207891 ACACCTATCTTACAGCTGTTGG 57.792 45.455 27.06 17.59 0.00 3.77
324 325 3.838317 ACACCTATCTTACAGCTGTTGGA 59.162 43.478 27.06 22.11 0.00 3.53
325 326 4.081420 ACACCTATCTTACAGCTGTTGGAG 60.081 45.833 27.06 19.53 0.00 3.86
326 327 4.160439 CACCTATCTTACAGCTGTTGGAGA 59.840 45.833 27.06 23.73 0.00 3.71
327 328 4.965532 ACCTATCTTACAGCTGTTGGAGAT 59.034 41.667 27.06 27.71 37.48 2.75
328 329 5.163364 ACCTATCTTACAGCTGTTGGAGATG 60.163 44.000 30.41 22.94 44.22 2.90
329 330 2.977914 TCTTACAGCTGTTGGAGATGC 58.022 47.619 27.06 0.00 42.24 3.91
330 331 2.012673 CTTACAGCTGTTGGAGATGCC 58.987 52.381 27.06 0.00 42.24 4.40
368 369 2.179427 GCTGGCCCTTTTATTTGGACT 58.821 47.619 0.00 0.00 0.00 3.85
381 382 3.366052 TTTGGACTAGAATTGCCCCTC 57.634 47.619 0.00 0.00 0.00 4.30
431 432 2.616960 CATGTAGCTTTCGGTGCACTA 58.383 47.619 17.98 2.19 36.11 2.74
461 462 5.183228 CGGAGGGCTATTTTTGACTAAAGA 58.817 41.667 0.00 0.00 0.00 2.52
510 511 2.686816 CCCAAAACCCTACGCGCAG 61.687 63.158 5.73 1.19 0.00 5.18
589 590 6.831353 TCTTGTCTGGTTGTTAATTTTCTCCA 59.169 34.615 0.00 0.00 0.00 3.86
600 601 7.367285 TGTTAATTTTCTCCACGGAAATCTTG 58.633 34.615 0.00 0.00 35.51 3.02
644 645 6.476243 TCGTACAAGAATGAAAAGGCTTAC 57.524 37.500 0.00 0.00 0.00 2.34
651 652 3.806949 ATGAAAAGGCTTACTGGGACA 57.193 42.857 0.00 0.00 0.00 4.02
889 892 0.179000 CCTTGATCTCCCTTCCACGG 59.821 60.000 0.00 0.00 0.00 4.94
938 942 2.973419 AGTTCGAACTGAGACTCGAC 57.027 50.000 29.24 0.00 43.35 4.20
1098 1106 4.493747 GGCGACGGGGACTTCTCG 62.494 72.222 0.00 0.00 0.00 4.04
1182 1190 1.808390 CTACGGTTCGGCCCTTTCG 60.808 63.158 0.00 0.00 0.00 3.46
1186 1194 1.593265 GGTTCGGCCCTTTCGTCTA 59.407 57.895 0.00 0.00 0.00 2.59
1187 1195 0.459759 GGTTCGGCCCTTTCGTCTAG 60.460 60.000 0.00 0.00 0.00 2.43
1200 1208 1.358759 GTCTAGCTCTCTCGCTGCC 59.641 63.158 0.00 0.00 41.12 4.85
1202 1210 2.043953 TAGCTCTCTCGCTGCCCA 60.044 61.111 0.00 0.00 41.12 5.36
1269 1277 1.044790 ATGCCCATGCTTACCTTGGC 61.045 55.000 0.00 0.00 37.42 4.52
1284 1292 0.676736 TTGGCCCGGTGTGATTTTTC 59.323 50.000 0.00 0.00 0.00 2.29
1294 1302 4.494690 CGGTGTGATTTTTCTGATCATCGG 60.495 45.833 0.00 0.00 36.07 4.18
1324 1333 6.569179 TTAGTTTGCACTGAACTATTTCCC 57.431 37.500 9.67 0.00 38.84 3.97
1325 1334 4.469657 AGTTTGCACTGAACTATTTCCCA 58.530 39.130 0.33 0.00 35.68 4.37
1326 1335 4.278419 AGTTTGCACTGAACTATTTCCCAC 59.722 41.667 0.33 0.00 35.68 4.61
1331 1340 1.659098 CTGAACTATTTCCCACGCGTC 59.341 52.381 9.86 0.00 0.00 5.19
1336 1353 2.482721 ACTATTTCCCACGCGTCTTTTG 59.517 45.455 9.86 0.00 0.00 2.44
1352 1369 0.597568 TTTGCGTGCAATCCTCTTGG 59.402 50.000 8.26 0.00 35.70 3.61
1357 1374 1.338105 CGTGCAATCCTCTTGGACAGA 60.338 52.381 9.68 0.00 46.51 3.41
1385 1402 1.663388 CCACAACTACAGCGACGCA 60.663 57.895 23.70 0.00 0.00 5.24
1435 1452 4.228567 TGCCACGGTTCTGCACGA 62.229 61.111 1.06 0.00 0.00 4.35
1440 1457 2.354188 CGGTTCTGCACGACGTCA 60.354 61.111 17.16 0.00 0.00 4.35
1467 1484 0.179100 AGTGATGAATCTCCACGCCG 60.179 55.000 0.00 0.00 36.06 6.46
1473 1490 0.598680 GAATCTCCACGCCGATCTGG 60.599 60.000 0.00 0.00 42.50 3.86
1477 1494 4.899239 CCACGCCGATCTGGAGCC 62.899 72.222 7.64 0.00 42.11 4.70
1480 1497 4.637489 CGCCGATCTGGAGCCGAG 62.637 72.222 7.64 0.00 42.00 4.63
1481 1498 3.219928 GCCGATCTGGAGCCGAGA 61.220 66.667 7.64 0.00 42.00 4.04
1482 1499 2.725008 CCGATCTGGAGCCGAGAC 59.275 66.667 0.00 0.00 42.00 3.36
1483 1500 1.826054 CCGATCTGGAGCCGAGACT 60.826 63.158 0.00 0.00 42.00 3.24
1484 1501 1.358402 CGATCTGGAGCCGAGACTG 59.642 63.158 0.00 0.00 0.00 3.51
1485 1502 1.380403 CGATCTGGAGCCGAGACTGT 61.380 60.000 0.00 0.00 0.00 3.55
1486 1503 0.820871 GATCTGGAGCCGAGACTGTT 59.179 55.000 0.00 0.00 0.00 3.16
1487 1504 0.820871 ATCTGGAGCCGAGACTGTTC 59.179 55.000 0.00 0.00 0.00 3.18
1488 1505 1.153939 CTGGAGCCGAGACTGTTCG 60.154 63.158 5.72 5.72 40.18 3.95
1489 1506 1.587043 CTGGAGCCGAGACTGTTCGA 61.587 60.000 11.92 0.00 43.03 3.71
1490 1507 0.965866 TGGAGCCGAGACTGTTCGAT 60.966 55.000 11.92 3.28 43.03 3.59
1491 1508 0.248702 GGAGCCGAGACTGTTCGATC 60.249 60.000 11.92 9.68 43.03 3.69
1492 1509 0.590230 GAGCCGAGACTGTTCGATCG 60.590 60.000 9.36 9.36 43.03 3.69
1525 1555 2.725203 TTTCCTCACGCCGGGTTCAG 62.725 60.000 2.18 0.00 0.00 3.02
1526 1556 3.691342 CCTCACGCCGGGTTCAGA 61.691 66.667 2.18 0.00 0.00 3.27
1529 1559 4.760047 CACGCCGGGTTCAGAGGG 62.760 72.222 2.18 0.00 0.00 4.30
1548 1578 1.640069 CGCGAGGACGACGAAGATA 59.360 57.895 0.00 0.00 42.66 1.98
1549 1579 0.653897 CGCGAGGACGACGAAGATAC 60.654 60.000 0.00 0.00 42.66 2.24
1550 1580 0.376152 GCGAGGACGACGAAGATACA 59.624 55.000 0.00 0.00 42.66 2.29
1559 1589 5.278364 GGACGACGAAGATACAATCAGGTAT 60.278 44.000 0.00 0.00 36.70 2.73
1561 1591 5.298527 ACGACGAAGATACAATCAGGTATGA 59.701 40.000 0.00 0.00 40.50 2.15
1563 1593 6.513556 CGACGAAGATACAATCAGGTATGAGT 60.514 42.308 0.00 0.00 39.29 3.41
1574 1604 3.764434 TCAGGTATGAGTGTCTTGACTCC 59.236 47.826 0.00 0.00 41.59 3.85
1575 1605 3.766591 CAGGTATGAGTGTCTTGACTCCT 59.233 47.826 0.00 0.00 41.59 3.69
1576 1606 3.766591 AGGTATGAGTGTCTTGACTCCTG 59.233 47.826 0.00 0.00 41.59 3.86
1624 1666 9.802039 TGTTTAAACCTCTTAACATATGAACCT 57.198 29.630 15.59 0.00 0.00 3.50
1628 1670 8.511604 AAACCTCTTAACATATGAACCTGATG 57.488 34.615 10.38 1.47 0.00 3.07
1629 1671 7.200434 ACCTCTTAACATATGAACCTGATGT 57.800 36.000 10.38 2.03 35.32 3.06
1630 1672 7.275920 ACCTCTTAACATATGAACCTGATGTC 58.724 38.462 10.38 0.00 32.67 3.06
1631 1673 6.708054 CCTCTTAACATATGAACCTGATGTCC 59.292 42.308 10.38 0.00 32.67 4.02
1632 1674 7.194112 TCTTAACATATGAACCTGATGTCCA 57.806 36.000 10.38 0.00 32.67 4.02
1633 1675 7.805163 TCTTAACATATGAACCTGATGTCCAT 58.195 34.615 10.38 0.00 32.67 3.41
1634 1676 7.933577 TCTTAACATATGAACCTGATGTCCATC 59.066 37.037 10.38 0.22 38.29 3.51
1635 1677 4.635223 ACATATGAACCTGATGTCCATCG 58.365 43.478 10.38 0.00 40.63 3.84
1636 1678 4.344968 ACATATGAACCTGATGTCCATCGA 59.655 41.667 10.38 0.00 40.63 3.59
1640 1682 1.692411 ACCTGATGTCCATCGATCGA 58.308 50.000 21.86 21.86 40.63 3.59
1655 1697 1.975362 GATCGATCGATCTCGCTTGTG 59.025 52.381 38.45 5.20 45.42 3.33
1667 1709 1.014044 CGCTTGTGTGTAGGTCGCAT 61.014 55.000 0.00 0.00 38.85 4.73
1671 1713 1.253100 TGTGTGTAGGTCGCATCAGA 58.747 50.000 0.00 0.00 38.85 3.27
1680 1722 0.671781 GTCGCATCAGAAGCTGGTGT 60.672 55.000 9.21 0.00 43.78 4.16
1685 1727 1.277273 CATCAGAAGCTGGTGTGGAGA 59.723 52.381 0.00 0.00 37.77 3.71
1754 1796 0.478072 TCACCCACAAGACCAAGCAT 59.522 50.000 0.00 0.00 0.00 3.79
1757 1799 1.308069 CCCACAAGACCAAGCATCCG 61.308 60.000 0.00 0.00 0.00 4.18
1759 1801 1.238439 CACAAGACCAAGCATCCGTT 58.762 50.000 0.00 0.00 0.00 4.44
1763 1805 0.250513 AGACCAAGCATCCGTTCTCC 59.749 55.000 0.00 0.00 0.00 3.71
1770 1812 0.392998 GCATCCGTTCTCCATGTGGT 60.393 55.000 0.00 0.00 36.34 4.16
1815 1857 0.382158 CTCGCTTGCTATGGTCGAGA 59.618 55.000 4.17 0.00 46.59 4.04
1882 1924 4.803426 GTCGAGCTGGAGGTGCGG 62.803 72.222 0.00 0.00 35.28 5.69
1902 1944 1.941668 GCCATGGCTTCGCTATAGGTC 60.942 57.143 29.98 0.00 38.26 3.85
1904 1946 2.408050 CATGGCTTCGCTATAGGTCAC 58.592 52.381 1.04 0.00 0.00 3.67
1923 1965 1.202818 ACTGCTCCACCTTCAAGTTCC 60.203 52.381 0.00 0.00 0.00 3.62
1933 1975 2.418197 CCTTCAAGTTCCGCCTCGAATA 60.418 50.000 0.00 0.00 0.00 1.75
2007 2060 1.635663 GCGGTTTCATGTGTCCTCGG 61.636 60.000 0.00 0.00 0.00 4.63
2037 2090 1.536072 GCTGTCGATCTCGCCACAATA 60.536 52.381 0.00 0.00 39.60 1.90
2038 2091 2.389059 CTGTCGATCTCGCCACAATAG 58.611 52.381 0.00 0.00 39.60 1.73
2039 2092 2.021457 TGTCGATCTCGCCACAATAGA 58.979 47.619 0.00 0.00 39.60 1.98
2041 2094 1.002792 TCGATCTCGCCACAATAGACG 60.003 52.381 0.00 0.00 39.60 4.18
2044 2097 3.258225 CTCGCCACAATAGACGAGG 57.742 57.895 3.46 0.00 46.20 4.63
2045 2098 0.738975 CTCGCCACAATAGACGAGGA 59.261 55.000 3.46 0.00 46.20 3.71
2046 2099 1.134367 CTCGCCACAATAGACGAGGAA 59.866 52.381 3.46 0.00 46.20 3.36
2047 2100 1.546923 TCGCCACAATAGACGAGGAAA 59.453 47.619 0.00 0.00 0.00 3.13
2048 2101 2.167693 TCGCCACAATAGACGAGGAAAT 59.832 45.455 0.00 0.00 0.00 2.17
2049 2102 3.382227 TCGCCACAATAGACGAGGAAATA 59.618 43.478 0.00 0.00 0.00 1.40
2052 2105 5.357257 GCCACAATAGACGAGGAAATAAGA 58.643 41.667 0.00 0.00 0.00 2.10
2053 2106 5.463724 GCCACAATAGACGAGGAAATAAGAG 59.536 44.000 0.00 0.00 0.00 2.85
2054 2107 5.463724 CCACAATAGACGAGGAAATAAGAGC 59.536 44.000 0.00 0.00 0.00 4.09
2055 2108 6.042777 CACAATAGACGAGGAAATAAGAGCA 58.957 40.000 0.00 0.00 0.00 4.26
2056 2109 6.535150 CACAATAGACGAGGAAATAAGAGCAA 59.465 38.462 0.00 0.00 0.00 3.91
2059 2112 4.749976 AGACGAGGAAATAAGAGCAACTC 58.250 43.478 0.00 0.00 0.00 3.01
2060 2113 3.863041 ACGAGGAAATAAGAGCAACTCC 58.137 45.455 0.00 0.00 0.00 3.85
2062 2115 4.253685 CGAGGAAATAAGAGCAACTCCAA 58.746 43.478 0.00 0.00 0.00 3.53
2063 2116 4.093556 CGAGGAAATAAGAGCAACTCCAAC 59.906 45.833 0.00 0.00 0.00 3.77
2065 2118 4.762251 AGGAAATAAGAGCAACTCCAACAC 59.238 41.667 0.00 0.00 0.00 3.32
2066 2119 4.518970 GGAAATAAGAGCAACTCCAACACA 59.481 41.667 0.00 0.00 0.00 3.72
2068 2121 1.312815 AAGAGCAACTCCAACACAGC 58.687 50.000 0.00 0.00 0.00 4.40
2080 2136 0.467290 AACACAGCGGTCCAAATGGT 60.467 50.000 0.00 0.00 36.34 3.55
2125 2181 4.260375 CGTTTCAGTCTTGGAACTGTTCTG 60.260 45.833 19.05 9.23 45.57 3.02
2126 2182 2.838736 TCAGTCTTGGAACTGTTCTGC 58.161 47.619 19.05 5.31 45.57 4.26
2157 2247 7.667283 GTCTATTGACAGTGAACGAAGTAATG 58.333 38.462 0.00 0.00 41.22 1.90
2213 2303 4.517285 TCCATCGCTATGCTTTCTCTTTT 58.483 39.130 0.00 0.00 0.00 2.27
2228 2318 9.389755 GCTTTCTCTTTTATTTCTACTCCATCT 57.610 33.333 0.00 0.00 0.00 2.90
2389 2492 0.250295 TTCTCGAACTGCCCAAGTGG 60.250 55.000 0.00 0.00 39.81 4.00
2408 2511 1.209747 GGGCTCGTCACCCTTAATCTT 59.790 52.381 3.34 0.00 44.68 2.40
2847 2950 1.955495 TTGATTCGCCGCTAGCTCCA 61.955 55.000 13.93 0.00 40.39 3.86
2856 2959 0.249238 CGCTAGCTCCACCACTGATC 60.249 60.000 13.93 0.00 0.00 2.92
2858 2961 1.068434 GCTAGCTCCACCACTGATCTC 59.932 57.143 7.70 0.00 0.00 2.75
2859 2962 2.382882 CTAGCTCCACCACTGATCTCA 58.617 52.381 0.00 0.00 0.00 3.27
2867 2970 3.529533 CACCACTGATCTCAGATTGGAC 58.470 50.000 18.63 0.00 46.59 4.02
2871 2974 2.428890 ACTGATCTCAGATTGGACGTCC 59.571 50.000 28.17 28.17 46.59 4.79
2872 2975 1.405463 TGATCTCAGATTGGACGTCCG 59.595 52.381 28.70 14.65 39.43 4.79
2873 2976 0.103208 ATCTCAGATTGGACGTCCGC 59.897 55.000 28.70 19.97 39.43 5.54
2877 2980 0.670546 CAGATTGGACGTCCGCAAGT 60.671 55.000 28.70 12.82 39.43 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.086934 GCACTATAAAAGCGAACGGC 57.913 50.000 0.00 0.00 44.05 5.68
13 14 5.339611 CACAAACAAGACGCACTATAAAAGC 59.660 40.000 0.00 0.00 0.00 3.51
14 15 6.573725 GTCACAAACAAGACGCACTATAAAAG 59.426 38.462 0.00 0.00 0.00 2.27
15 16 6.037281 TGTCACAAACAAGACGCACTATAAAA 59.963 34.615 0.00 0.00 37.58 1.52
16 17 5.524281 TGTCACAAACAAGACGCACTATAAA 59.476 36.000 0.00 0.00 37.58 1.40
17 18 5.050634 GTGTCACAAACAAGACGCACTATAA 60.051 40.000 0.00 0.00 43.00 0.98
18 19 4.446385 GTGTCACAAACAAGACGCACTATA 59.554 41.667 0.00 0.00 43.00 1.31
19 20 3.247648 GTGTCACAAACAAGACGCACTAT 59.752 43.478 0.00 0.00 43.00 2.12
20 21 2.605818 GTGTCACAAACAAGACGCACTA 59.394 45.455 0.00 0.00 43.00 2.74
21 22 1.396996 GTGTCACAAACAAGACGCACT 59.603 47.619 0.00 0.00 43.00 4.40
22 23 1.396996 AGTGTCACAAACAAGACGCAC 59.603 47.619 5.62 0.00 45.20 5.34
23 24 1.732941 AGTGTCACAAACAAGACGCA 58.267 45.000 5.62 0.00 45.20 5.24
24 25 2.825086 AAGTGTCACAAACAAGACGC 57.175 45.000 5.62 0.00 43.62 5.19
25 26 3.247648 CCCTAAGTGTCACAAACAAGACG 59.752 47.826 5.62 0.00 40.31 4.18
26 27 3.003378 GCCCTAAGTGTCACAAACAAGAC 59.997 47.826 5.62 0.00 40.31 3.01
27 28 3.211045 GCCCTAAGTGTCACAAACAAGA 58.789 45.455 5.62 0.00 40.31 3.02
28 29 2.948979 TGCCCTAAGTGTCACAAACAAG 59.051 45.455 5.62 0.00 40.31 3.16
29 30 3.006112 TGCCCTAAGTGTCACAAACAA 57.994 42.857 5.62 0.00 40.31 2.83
30 31 2.719531 TGCCCTAAGTGTCACAAACA 57.280 45.000 5.62 0.00 34.78 2.83
31 32 3.412386 AGATGCCCTAAGTGTCACAAAC 58.588 45.455 5.62 0.00 0.00 2.93
32 33 3.788227 AGATGCCCTAAGTGTCACAAA 57.212 42.857 5.62 0.00 0.00 2.83
33 34 3.072330 TGAAGATGCCCTAAGTGTCACAA 59.928 43.478 5.62 0.00 0.00 3.33
34 35 2.637382 TGAAGATGCCCTAAGTGTCACA 59.363 45.455 5.62 0.00 0.00 3.58
35 36 3.334583 TGAAGATGCCCTAAGTGTCAC 57.665 47.619 0.00 0.00 0.00 3.67
36 37 4.574674 ATTGAAGATGCCCTAAGTGTCA 57.425 40.909 0.00 0.00 0.00 3.58
37 38 5.918608 TCTATTGAAGATGCCCTAAGTGTC 58.081 41.667 0.00 0.00 0.00 3.67
38 39 5.957771 TCTATTGAAGATGCCCTAAGTGT 57.042 39.130 0.00 0.00 0.00 3.55
39 40 6.769822 ACAATCTATTGAAGATGCCCTAAGTG 59.230 38.462 9.60 0.00 44.56 3.16
40 41 6.904626 ACAATCTATTGAAGATGCCCTAAGT 58.095 36.000 9.60 0.00 44.56 2.24
41 42 8.944029 CATACAATCTATTGAAGATGCCCTAAG 58.056 37.037 9.60 0.00 44.56 2.18
42 43 8.439971 ACATACAATCTATTGAAGATGCCCTAA 58.560 33.333 9.60 0.00 44.56 2.69
43 44 7.977818 ACATACAATCTATTGAAGATGCCCTA 58.022 34.615 9.60 0.00 44.56 3.53
44 45 6.845908 ACATACAATCTATTGAAGATGCCCT 58.154 36.000 9.60 0.00 44.56 5.19
45 46 7.516198 AACATACAATCTATTGAAGATGCCC 57.484 36.000 9.60 0.00 44.56 5.36
46 47 9.277783 ACTAACATACAATCTATTGAAGATGCC 57.722 33.333 9.60 0.00 44.56 4.40
55 56 9.959721 ACCAACAAGACTAACATACAATCTATT 57.040 29.630 0.00 0.00 0.00 1.73
58 59 9.787435 TTTACCAACAAGACTAACATACAATCT 57.213 29.630 0.00 0.00 0.00 2.40
62 63 9.344772 ACATTTTACCAACAAGACTAACATACA 57.655 29.630 0.00 0.00 0.00 2.29
65 66 8.908903 TGAACATTTTACCAACAAGACTAACAT 58.091 29.630 0.00 0.00 0.00 2.71
66 67 8.282455 TGAACATTTTACCAACAAGACTAACA 57.718 30.769 0.00 0.00 0.00 2.41
67 68 9.180678 CATGAACATTTTACCAACAAGACTAAC 57.819 33.333 0.00 0.00 0.00 2.34
68 69 8.908903 ACATGAACATTTTACCAACAAGACTAA 58.091 29.630 0.00 0.00 0.00 2.24
69 70 8.458573 ACATGAACATTTTACCAACAAGACTA 57.541 30.769 0.00 0.00 0.00 2.59
70 71 7.068103 TGACATGAACATTTTACCAACAAGACT 59.932 33.333 0.00 0.00 0.00 3.24
71 72 7.199766 TGACATGAACATTTTACCAACAAGAC 58.800 34.615 0.00 0.00 0.00 3.01
72 73 7.340122 TGACATGAACATTTTACCAACAAGA 57.660 32.000 0.00 0.00 0.00 3.02
73 74 7.866898 TGATGACATGAACATTTTACCAACAAG 59.133 33.333 0.00 0.00 0.00 3.16
74 75 7.720442 TGATGACATGAACATTTTACCAACAA 58.280 30.769 0.00 0.00 0.00 2.83
75 76 7.282332 TGATGACATGAACATTTTACCAACA 57.718 32.000 0.00 0.00 0.00 3.33
76 77 7.116233 GGTTGATGACATGAACATTTTACCAAC 59.884 37.037 17.80 18.37 0.00 3.77
77 78 7.151308 GGTTGATGACATGAACATTTTACCAA 58.849 34.615 17.80 2.80 0.00 3.67
78 79 6.266330 TGGTTGATGACATGAACATTTTACCA 59.734 34.615 17.80 20.21 34.14 3.25
79 80 6.686630 TGGTTGATGACATGAACATTTTACC 58.313 36.000 17.80 12.58 0.00 2.85
80 81 7.651304 TGTTGGTTGATGACATGAACATTTTAC 59.349 33.333 17.80 9.07 0.00 2.01
81 82 7.720442 TGTTGGTTGATGACATGAACATTTTA 58.280 30.769 17.80 0.00 0.00 1.52
82 83 6.580788 TGTTGGTTGATGACATGAACATTTT 58.419 32.000 17.80 0.00 0.00 1.82
83 84 6.159299 TGTTGGTTGATGACATGAACATTT 57.841 33.333 17.80 0.00 0.00 2.32
84 85 5.787953 TGTTGGTTGATGACATGAACATT 57.212 34.783 17.80 0.00 0.00 2.71
85 86 5.775686 CTTGTTGGTTGATGACATGAACAT 58.224 37.500 17.80 4.71 0.00 2.71
86 87 4.499526 GCTTGTTGGTTGATGACATGAACA 60.500 41.667 17.80 1.55 0.00 3.18
87 88 3.983344 GCTTGTTGGTTGATGACATGAAC 59.017 43.478 9.06 9.06 0.00 3.18
88 89 3.890756 AGCTTGTTGGTTGATGACATGAA 59.109 39.130 0.00 0.00 0.00 2.57
89 90 3.489355 AGCTTGTTGGTTGATGACATGA 58.511 40.909 0.00 0.00 0.00 3.07
90 91 3.928727 AGCTTGTTGGTTGATGACATG 57.071 42.857 0.00 0.00 0.00 3.21
91 92 5.255687 TGATAGCTTGTTGGTTGATGACAT 58.744 37.500 0.00 0.00 0.00 3.06
92 93 4.650734 TGATAGCTTGTTGGTTGATGACA 58.349 39.130 0.00 0.00 0.00 3.58
93 94 5.824904 ATGATAGCTTGTTGGTTGATGAC 57.175 39.130 0.00 0.00 0.00 3.06
94 95 6.413892 TGTATGATAGCTTGTTGGTTGATGA 58.586 36.000 0.00 0.00 0.00 2.92
95 96 6.682423 TGTATGATAGCTTGTTGGTTGATG 57.318 37.500 0.00 0.00 0.00 3.07
96 97 6.886459 AGTTGTATGATAGCTTGTTGGTTGAT 59.114 34.615 0.00 0.00 0.00 2.57
97 98 6.237901 AGTTGTATGATAGCTTGTTGGTTGA 58.762 36.000 0.00 0.00 0.00 3.18
98 99 6.500684 AGTTGTATGATAGCTTGTTGGTTG 57.499 37.500 0.00 0.00 0.00 3.77
99 100 8.807948 ATTAGTTGTATGATAGCTTGTTGGTT 57.192 30.769 0.00 0.00 0.00 3.67
100 101 7.499232 GGATTAGTTGTATGATAGCTTGTTGGT 59.501 37.037 0.00 0.00 0.00 3.67
101 102 7.498900 TGGATTAGTTGTATGATAGCTTGTTGG 59.501 37.037 0.00 0.00 0.00 3.77
102 103 8.437360 TGGATTAGTTGTATGATAGCTTGTTG 57.563 34.615 0.00 0.00 0.00 3.33
103 104 9.632638 ATTGGATTAGTTGTATGATAGCTTGTT 57.367 29.630 0.00 0.00 0.00 2.83
104 105 9.060347 CATTGGATTAGTTGTATGATAGCTTGT 57.940 33.333 0.00 0.00 0.00 3.16
105 106 8.509690 CCATTGGATTAGTTGTATGATAGCTTG 58.490 37.037 0.00 0.00 0.00 4.01
106 107 7.667219 CCCATTGGATTAGTTGTATGATAGCTT 59.333 37.037 3.62 0.00 0.00 3.74
107 108 7.170965 CCCATTGGATTAGTTGTATGATAGCT 58.829 38.462 3.62 0.00 0.00 3.32
108 109 6.942576 ACCCATTGGATTAGTTGTATGATAGC 59.057 38.462 3.62 0.00 34.81 2.97
109 110 8.786898 CAACCCATTGGATTAGTTGTATGATAG 58.213 37.037 3.62 0.00 34.51 2.08
110 111 8.278639 ACAACCCATTGGATTAGTTGTATGATA 58.721 33.333 20.10 0.00 46.69 2.15
111 112 7.125391 ACAACCCATTGGATTAGTTGTATGAT 58.875 34.615 20.10 2.99 46.69 2.45
112 113 6.489603 ACAACCCATTGGATTAGTTGTATGA 58.510 36.000 20.10 0.00 46.69 2.15
113 114 6.773976 ACAACCCATTGGATTAGTTGTATG 57.226 37.500 20.10 3.25 46.69 2.39
117 118 8.746052 TTAGATACAACCCATTGGATTAGTTG 57.254 34.615 16.41 16.41 39.68 3.16
118 119 7.998964 CCTTAGATACAACCCATTGGATTAGTT 59.001 37.037 3.62 0.00 39.68 2.24
119 120 7.128883 ACCTTAGATACAACCCATTGGATTAGT 59.871 37.037 3.62 0.00 39.68 2.24
120 121 7.518188 ACCTTAGATACAACCCATTGGATTAG 58.482 38.462 3.62 0.00 39.68 1.73
121 122 7.460214 ACCTTAGATACAACCCATTGGATTA 57.540 36.000 3.62 0.00 39.68 1.75
122 123 6.341408 ACCTTAGATACAACCCATTGGATT 57.659 37.500 3.62 0.00 39.68 3.01
123 124 5.994416 ACCTTAGATACAACCCATTGGAT 57.006 39.130 3.62 0.00 42.52 3.41
124 125 6.043938 GGATACCTTAGATACAACCCATTGGA 59.956 42.308 3.62 0.00 40.42 3.53
125 126 6.183361 TGGATACCTTAGATACAACCCATTGG 60.183 42.308 0.00 0.00 40.42 3.16
126 127 6.837312 TGGATACCTTAGATACAACCCATTG 58.163 40.000 0.00 0.00 41.98 2.82
127 128 7.460214 TTGGATACCTTAGATACAACCCATT 57.540 36.000 0.00 0.00 0.00 3.16
128 129 7.648177 ATTGGATACCTTAGATACAACCCAT 57.352 36.000 0.00 0.00 29.87 4.00
129 130 8.014263 TCTATTGGATACCTTAGATACAACCCA 58.986 37.037 0.00 0.00 29.87 4.51
130 131 8.431910 TCTATTGGATACCTTAGATACAACCC 57.568 38.462 0.00 0.00 29.87 4.11
131 132 9.877178 CATCTATTGGATACCTTAGATACAACC 57.123 37.037 0.00 0.00 32.26 3.77
138 139 9.828691 TTCTCATCATCTATTGGATACCTTAGA 57.171 33.333 0.00 0.00 32.64 2.10
153 154 9.745880 GCAATCACATTTATTTTCTCATCATCT 57.254 29.630 0.00 0.00 0.00 2.90
154 155 9.745880 AGCAATCACATTTATTTTCTCATCATC 57.254 29.630 0.00 0.00 0.00 2.92
155 156 9.745880 GAGCAATCACATTTATTTTCTCATCAT 57.254 29.630 0.00 0.00 0.00 2.45
156 157 8.963725 AGAGCAATCACATTTATTTTCTCATCA 58.036 29.630 0.00 0.00 0.00 3.07
157 158 9.448294 GAGAGCAATCACATTTATTTTCTCATC 57.552 33.333 0.00 0.00 31.25 2.92
158 159 9.186837 AGAGAGCAATCACATTTATTTTCTCAT 57.813 29.630 0.00 0.00 32.27 2.90
159 160 8.571461 AGAGAGCAATCACATTTATTTTCTCA 57.429 30.769 0.00 0.00 32.27 3.27
166 167 8.844244 GGTGAAATAGAGAGCAATCACATTTAT 58.156 33.333 6.12 0.00 39.06 1.40
167 168 8.049117 AGGTGAAATAGAGAGCAATCACATTTA 58.951 33.333 6.12 0.00 39.06 1.40
168 169 6.888632 AGGTGAAATAGAGAGCAATCACATTT 59.111 34.615 6.12 0.00 39.06 2.32
169 170 6.421485 AGGTGAAATAGAGAGCAATCACATT 58.579 36.000 6.12 0.00 39.06 2.71
170 171 5.999044 AGGTGAAATAGAGAGCAATCACAT 58.001 37.500 6.12 0.00 39.06 3.21
171 172 5.426689 AGGTGAAATAGAGAGCAATCACA 57.573 39.130 6.12 0.00 39.06 3.58
172 173 5.065731 CCAAGGTGAAATAGAGAGCAATCAC 59.934 44.000 0.00 0.00 37.14 3.06
173 174 5.045651 TCCAAGGTGAAATAGAGAGCAATCA 60.046 40.000 0.00 0.00 0.00 2.57
174 175 5.431765 TCCAAGGTGAAATAGAGAGCAATC 58.568 41.667 0.00 0.00 0.00 2.67
175 176 5.435291 CTCCAAGGTGAAATAGAGAGCAAT 58.565 41.667 0.00 0.00 0.00 3.56
176 177 4.836825 CTCCAAGGTGAAATAGAGAGCAA 58.163 43.478 0.00 0.00 0.00 3.91
177 178 3.369892 GCTCCAAGGTGAAATAGAGAGCA 60.370 47.826 0.00 0.00 43.79 4.26
178 179 3.118445 AGCTCCAAGGTGAAATAGAGAGC 60.118 47.826 0.00 0.00 44.49 4.09
179 180 4.751767 AGCTCCAAGGTGAAATAGAGAG 57.248 45.455 0.00 0.00 0.00 3.20
180 181 4.287067 ACAAGCTCCAAGGTGAAATAGAGA 59.713 41.667 0.00 0.00 0.00 3.10
181 182 4.394300 CACAAGCTCCAAGGTGAAATAGAG 59.606 45.833 0.00 0.00 33.16 2.43
182 183 4.326826 CACAAGCTCCAAGGTGAAATAGA 58.673 43.478 0.00 0.00 33.16 1.98
183 184 3.119708 GCACAAGCTCCAAGGTGAAATAG 60.120 47.826 0.00 0.00 37.91 1.73
184 185 2.819608 GCACAAGCTCCAAGGTGAAATA 59.180 45.455 0.00 0.00 37.91 1.40
185 186 1.615392 GCACAAGCTCCAAGGTGAAAT 59.385 47.619 0.00 0.00 37.91 2.17
186 187 1.032014 GCACAAGCTCCAAGGTGAAA 58.968 50.000 0.00 0.00 37.91 2.69
187 188 0.106769 TGCACAAGCTCCAAGGTGAA 60.107 50.000 0.00 0.00 42.74 3.18
188 189 0.106769 TTGCACAAGCTCCAAGGTGA 60.107 50.000 0.00 0.00 42.74 4.02
189 190 0.746063 TTTGCACAAGCTCCAAGGTG 59.254 50.000 0.00 0.00 42.74 4.00
190 191 1.035139 CTTTGCACAAGCTCCAAGGT 58.965 50.000 0.00 0.00 42.74 3.50
191 192 0.316204 CCTTTGCACAAGCTCCAAGG 59.684 55.000 0.00 0.00 42.74 3.61
192 193 1.035139 ACCTTTGCACAAGCTCCAAG 58.965 50.000 0.00 0.00 42.74 3.61
193 194 1.484038 AACCTTTGCACAAGCTCCAA 58.516 45.000 0.00 0.00 42.74 3.53
194 195 2.356665 TAACCTTTGCACAAGCTCCA 57.643 45.000 0.00 0.00 42.74 3.86
195 196 3.578688 CAATAACCTTTGCACAAGCTCC 58.421 45.455 0.00 0.00 42.74 4.70
196 197 3.005791 ACCAATAACCTTTGCACAAGCTC 59.994 43.478 0.00 0.00 42.74 4.09
197 198 2.965147 ACCAATAACCTTTGCACAAGCT 59.035 40.909 0.00 0.00 42.74 3.74
198 199 3.385193 ACCAATAACCTTTGCACAAGC 57.615 42.857 0.00 0.00 42.57 4.01
199 200 7.378181 AGAATAACCAATAACCTTTGCACAAG 58.622 34.615 0.00 0.00 0.00 3.16
200 201 7.296628 AGAATAACCAATAACCTTTGCACAA 57.703 32.000 0.00 0.00 0.00 3.33
201 202 6.909550 AGAATAACCAATAACCTTTGCACA 57.090 33.333 0.00 0.00 0.00 4.57
202 203 7.822658 TGTAGAATAACCAATAACCTTTGCAC 58.177 34.615 0.00 0.00 0.00 4.57
203 204 8.588290 ATGTAGAATAACCAATAACCTTTGCA 57.412 30.769 0.00 0.00 0.00 4.08
221 222 9.587772 GAGAGAGCAAAATTGTACTATGTAGAA 57.412 33.333 0.00 0.00 0.00 2.10
222 223 8.972127 AGAGAGAGCAAAATTGTACTATGTAGA 58.028 33.333 0.00 0.00 0.00 2.59
223 224 9.243637 GAGAGAGAGCAAAATTGTACTATGTAG 57.756 37.037 0.00 0.00 0.00 2.74
224 225 8.198109 GGAGAGAGAGCAAAATTGTACTATGTA 58.802 37.037 0.00 0.00 0.00 2.29
225 226 7.044798 GGAGAGAGAGCAAAATTGTACTATGT 58.955 38.462 0.00 0.00 0.00 2.29
226 227 7.010923 GTGGAGAGAGAGCAAAATTGTACTATG 59.989 40.741 0.00 0.00 0.00 2.23
227 228 7.044798 GTGGAGAGAGAGCAAAATTGTACTAT 58.955 38.462 0.00 0.00 0.00 2.12
228 229 6.014584 TGTGGAGAGAGAGCAAAATTGTACTA 60.015 38.462 0.00 0.00 0.00 1.82
229 230 5.221722 TGTGGAGAGAGAGCAAAATTGTACT 60.222 40.000 0.00 0.00 0.00 2.73
230 231 4.997395 TGTGGAGAGAGAGCAAAATTGTAC 59.003 41.667 0.00 0.00 0.00 2.90
231 232 5.227569 TGTGGAGAGAGAGCAAAATTGTA 57.772 39.130 0.00 0.00 0.00 2.41
232 233 4.090761 TGTGGAGAGAGAGCAAAATTGT 57.909 40.909 0.00 0.00 0.00 2.71
233 234 5.640189 AATGTGGAGAGAGAGCAAAATTG 57.360 39.130 0.00 0.00 0.00 2.32
234 235 7.951347 ATAAATGTGGAGAGAGAGCAAAATT 57.049 32.000 0.00 0.00 0.00 1.82
235 236 7.951347 AATAAATGTGGAGAGAGAGCAAAAT 57.049 32.000 0.00 0.00 0.00 1.82
236 237 7.882791 TGTAATAAATGTGGAGAGAGAGCAAAA 59.117 33.333 0.00 0.00 0.00 2.44
237 238 7.394016 TGTAATAAATGTGGAGAGAGAGCAAA 58.606 34.615 0.00 0.00 0.00 3.68
238 239 6.946340 TGTAATAAATGTGGAGAGAGAGCAA 58.054 36.000 0.00 0.00 0.00 3.91
239 240 6.544928 TGTAATAAATGTGGAGAGAGAGCA 57.455 37.500 0.00 0.00 0.00 4.26
240 241 6.073331 GCATGTAATAAATGTGGAGAGAGAGC 60.073 42.308 0.00 0.00 0.00 4.09
241 242 6.426328 GGCATGTAATAAATGTGGAGAGAGAG 59.574 42.308 0.00 0.00 0.00 3.20
242 243 6.126796 TGGCATGTAATAAATGTGGAGAGAGA 60.127 38.462 0.00 0.00 0.00 3.10
243 244 6.017605 GTGGCATGTAATAAATGTGGAGAGAG 60.018 42.308 0.00 0.00 0.00 3.20
244 245 5.822519 GTGGCATGTAATAAATGTGGAGAGA 59.177 40.000 0.00 0.00 0.00 3.10
245 246 5.589855 TGTGGCATGTAATAAATGTGGAGAG 59.410 40.000 0.00 0.00 0.00 3.20
246 247 5.504853 TGTGGCATGTAATAAATGTGGAGA 58.495 37.500 0.00 0.00 0.00 3.71
247 248 5.833406 TGTGGCATGTAATAAATGTGGAG 57.167 39.130 0.00 0.00 0.00 3.86
248 249 5.890419 TGATGTGGCATGTAATAAATGTGGA 59.110 36.000 0.00 0.00 0.00 4.02
249 250 6.146601 TGATGTGGCATGTAATAAATGTGG 57.853 37.500 0.00 0.00 0.00 4.17
250 251 7.427214 TGATGATGTGGCATGTAATAAATGTG 58.573 34.615 0.00 0.00 0.00 3.21
251 252 7.585579 TGATGATGTGGCATGTAATAAATGT 57.414 32.000 0.00 0.00 0.00 2.71
255 256 9.299465 ACATATTGATGATGTGGCATGTAATAA 57.701 29.630 0.00 0.00 36.18 1.40
256 257 8.866970 ACATATTGATGATGTGGCATGTAATA 57.133 30.769 0.00 0.00 36.18 0.98
257 258 7.094075 GGACATATTGATGATGTGGCATGTAAT 60.094 37.037 0.00 0.00 36.65 1.89
258 259 6.207221 GGACATATTGATGATGTGGCATGTAA 59.793 38.462 0.00 0.00 36.65 2.41
259 260 5.706833 GGACATATTGATGATGTGGCATGTA 59.293 40.000 0.00 0.00 36.65 2.29
260 261 4.521639 GGACATATTGATGATGTGGCATGT 59.478 41.667 0.00 0.00 36.65 3.21
261 262 4.765339 AGGACATATTGATGATGTGGCATG 59.235 41.667 0.00 0.00 36.65 4.06
262 263 4.994282 AGGACATATTGATGATGTGGCAT 58.006 39.130 0.00 0.00 36.65 4.40
263 264 4.442401 AGGACATATTGATGATGTGGCA 57.558 40.909 0.00 0.00 36.65 4.92
264 265 5.798132 TCTAGGACATATTGATGATGTGGC 58.202 41.667 0.00 0.00 37.65 5.01
265 266 6.822170 CCATCTAGGACATATTGATGATGTGG 59.178 42.308 0.00 0.00 41.22 4.17
266 267 6.315642 GCCATCTAGGACATATTGATGATGTG 59.684 42.308 0.00 0.00 41.22 3.21
267 268 6.013119 TGCCATCTAGGACATATTGATGATGT 60.013 38.462 0.00 0.00 41.22 3.06
268 269 6.412214 TGCCATCTAGGACATATTGATGATG 58.588 40.000 0.00 0.00 41.22 3.07
269 270 6.631763 TGCCATCTAGGACATATTGATGAT 57.368 37.500 0.00 0.00 41.22 2.45
270 271 6.438186 TTGCCATCTAGGACATATTGATGA 57.562 37.500 0.00 0.00 41.22 2.92
271 272 7.698506 ATTTGCCATCTAGGACATATTGATG 57.301 36.000 0.00 0.00 41.22 3.07
272 273 8.716674 AAATTTGCCATCTAGGACATATTGAT 57.283 30.769 0.00 0.00 41.22 2.57
273 274 9.812347 ATAAATTTGCCATCTAGGACATATTGA 57.188 29.630 0.00 0.00 41.22 2.57
275 276 9.812347 TGATAAATTTGCCATCTAGGACATATT 57.188 29.630 0.00 0.00 41.22 1.28
276 277 9.812347 TTGATAAATTTGCCATCTAGGACATAT 57.188 29.630 0.00 0.00 41.22 1.78
277 278 9.066892 GTTGATAAATTTGCCATCTAGGACATA 57.933 33.333 0.00 0.00 41.22 2.29
278 279 7.560991 TGTTGATAAATTTGCCATCTAGGACAT 59.439 33.333 0.00 0.00 41.22 3.06
279 280 6.889177 TGTTGATAAATTTGCCATCTAGGACA 59.111 34.615 0.00 0.00 41.22 4.02
280 281 7.196331 GTGTTGATAAATTTGCCATCTAGGAC 58.804 38.462 0.00 0.00 41.22 3.85
281 282 6.321181 GGTGTTGATAAATTTGCCATCTAGGA 59.679 38.462 0.00 0.00 41.22 2.94
282 283 6.322201 AGGTGTTGATAAATTTGCCATCTAGG 59.678 38.462 0.00 0.00 41.84 3.02
283 284 7.338800 AGGTGTTGATAAATTTGCCATCTAG 57.661 36.000 0.00 0.00 0.00 2.43
284 285 8.995027 ATAGGTGTTGATAAATTTGCCATCTA 57.005 30.769 0.00 1.25 0.00 1.98
285 286 7.781693 AGATAGGTGTTGATAAATTTGCCATCT 59.218 33.333 0.00 0.00 0.00 2.90
286 287 7.945134 AGATAGGTGTTGATAAATTTGCCATC 58.055 34.615 0.00 0.00 0.00 3.51
287 288 7.902920 AGATAGGTGTTGATAAATTTGCCAT 57.097 32.000 0.00 0.00 0.00 4.40
288 289 7.716799 AAGATAGGTGTTGATAAATTTGCCA 57.283 32.000 0.00 0.00 0.00 4.92
289 290 8.682710 TGTAAGATAGGTGTTGATAAATTTGCC 58.317 33.333 0.00 0.00 0.00 4.52
290 291 9.722056 CTGTAAGATAGGTGTTGATAAATTTGC 57.278 33.333 0.00 0.00 34.07 3.68
291 292 9.722056 GCTGTAAGATAGGTGTTGATAAATTTG 57.278 33.333 0.00 0.00 34.07 2.32
292 293 9.686683 AGCTGTAAGATAGGTGTTGATAAATTT 57.313 29.630 0.00 0.00 34.07 1.82
293 294 9.113838 CAGCTGTAAGATAGGTGTTGATAAATT 57.886 33.333 5.25 0.00 38.49 1.82
294 295 8.668510 CAGCTGTAAGATAGGTGTTGATAAAT 57.331 34.615 5.25 0.00 38.49 1.40
303 304 4.160439 TCTCCAACAGCTGTAAGATAGGTG 59.840 45.833 22.01 11.82 46.21 4.00
304 305 4.353777 TCTCCAACAGCTGTAAGATAGGT 58.646 43.478 22.01 0.00 34.07 3.08
305 306 5.295950 CATCTCCAACAGCTGTAAGATAGG 58.704 45.833 26.35 18.87 34.07 2.57
306 307 4.749099 GCATCTCCAACAGCTGTAAGATAG 59.251 45.833 26.35 22.13 34.07 2.08
307 308 4.443457 GGCATCTCCAACAGCTGTAAGATA 60.443 45.833 26.35 17.54 31.80 1.98
308 309 3.539604 GCATCTCCAACAGCTGTAAGAT 58.460 45.455 22.01 22.99 34.07 2.40
309 310 2.355108 GGCATCTCCAACAGCTGTAAGA 60.355 50.000 22.01 21.85 31.80 2.10
310 311 2.012673 GGCATCTCCAACAGCTGTAAG 58.987 52.381 22.01 17.42 34.01 2.34
311 312 1.340017 GGGCATCTCCAACAGCTGTAA 60.340 52.381 22.01 8.06 36.21 2.41
312 313 0.253044 GGGCATCTCCAACAGCTGTA 59.747 55.000 22.01 3.84 36.21 2.74
313 314 1.001641 GGGCATCTCCAACAGCTGT 60.002 57.895 15.25 15.25 36.21 4.40
314 315 0.323178 AAGGGCATCTCCAACAGCTG 60.323 55.000 13.48 13.48 36.21 4.24
315 316 1.065126 GTAAGGGCATCTCCAACAGCT 60.065 52.381 0.00 0.00 36.21 4.24
316 317 1.340017 TGTAAGGGCATCTCCAACAGC 60.340 52.381 0.00 0.00 36.21 4.40
317 318 2.359900 GTGTAAGGGCATCTCCAACAG 58.640 52.381 0.00 0.00 36.21 3.16
318 319 1.004277 GGTGTAAGGGCATCTCCAACA 59.996 52.381 0.00 0.00 36.21 3.33
319 320 1.751437 GGTGTAAGGGCATCTCCAAC 58.249 55.000 0.00 0.00 36.21 3.77
320 321 0.251916 CGGTGTAAGGGCATCTCCAA 59.748 55.000 0.00 0.00 36.21 3.53
321 322 0.616395 TCGGTGTAAGGGCATCTCCA 60.616 55.000 0.00 0.00 36.21 3.86
322 323 0.539986 TTCGGTGTAAGGGCATCTCC 59.460 55.000 0.00 0.00 0.00 3.71
323 324 2.007608 GTTTCGGTGTAAGGGCATCTC 58.992 52.381 0.00 0.00 0.00 2.75
324 325 1.349688 TGTTTCGGTGTAAGGGCATCT 59.650 47.619 0.00 0.00 0.00 2.90
325 326 1.816074 TGTTTCGGTGTAAGGGCATC 58.184 50.000 0.00 0.00 0.00 3.91
326 327 2.091541 CATGTTTCGGTGTAAGGGCAT 58.908 47.619 0.00 0.00 0.00 4.40
327 328 1.072489 TCATGTTTCGGTGTAAGGGCA 59.928 47.619 0.00 0.00 0.00 5.36
328 329 1.737793 CTCATGTTTCGGTGTAAGGGC 59.262 52.381 0.00 0.00 0.00 5.19
329 330 1.737793 GCTCATGTTTCGGTGTAAGGG 59.262 52.381 0.00 0.00 0.00 3.95
330 331 2.416547 CAGCTCATGTTTCGGTGTAAGG 59.583 50.000 0.00 0.00 0.00 2.69
368 369 2.642311 TGAACAGTGAGGGGCAATTCTA 59.358 45.455 0.00 0.00 0.00 2.10
381 382 3.309138 GCTGCATGATAGTCTGAACAGTG 59.691 47.826 0.00 0.00 0.00 3.66
452 453 3.182972 GTGCGTTTAAGCGTCTTTAGTCA 59.817 43.478 13.36 0.00 40.67 3.41
461 462 4.215965 CAAAATGTAGTGCGTTTAAGCGT 58.784 39.130 13.36 0.00 40.67 5.07
501 502 3.554259 TCCATATTCTACTGCGCGTAG 57.446 47.619 23.12 23.12 45.68 3.51
589 590 1.274167 TGGAGCGTACAAGATTTCCGT 59.726 47.619 0.00 0.00 0.00 4.69
623 624 6.349363 CCCAGTAAGCCTTTTCATTCTTGTAC 60.349 42.308 0.00 0.00 0.00 2.90
644 645 2.040278 TCCTTTGGATCAGTTGTCCCAG 59.960 50.000 0.00 0.00 34.76 4.45
737 740 7.809665 TGGCCTTTATTACGAAGTTTAAGAAC 58.190 34.615 3.32 0.00 37.78 3.01
930 934 2.627737 GCGTGTGGGAGTCGAGTCT 61.628 63.158 19.33 0.00 0.00 3.24
938 942 1.079543 CTGAGGAAGCGTGTGGGAG 60.080 63.158 0.00 0.00 0.00 4.30
1187 1195 0.669932 CATATGGGCAGCGAGAGAGC 60.670 60.000 0.00 0.00 37.41 4.09
1200 1208 0.319728 AGCTACTCGCAGGCATATGG 59.680 55.000 4.56 0.00 42.61 2.74
1202 1210 1.626686 AGAGCTACTCGCAGGCATAT 58.373 50.000 0.00 0.00 42.61 1.78
1229 1237 0.721154 CACGCATGTACGTTGATGCT 59.279 50.000 22.04 11.33 45.75 3.79
1263 1271 1.184970 AAAATCACACCGGGCCAAGG 61.185 55.000 14.26 14.26 0.00 3.61
1269 1277 3.081061 TGATCAGAAAAATCACACCGGG 58.919 45.455 6.32 0.00 0.00 5.73
1284 1292 6.634436 GCAAACTAATTAAAGCCGATGATCAG 59.366 38.462 0.09 0.00 0.00 2.90
1294 1302 9.626045 AATAGTTCAGTGCAAACTAATTAAAGC 57.374 29.630 12.27 0.00 41.26 3.51
1331 1340 2.322161 CAAGAGGATTGCACGCAAAAG 58.678 47.619 8.76 0.00 39.55 2.27
1336 1353 4.301505 TCCAAGAGGATTGCACGC 57.698 55.556 0.00 0.00 39.61 5.34
1352 1369 1.252175 TGTGGCTCAGACTCTCTGTC 58.748 55.000 0.00 0.00 44.58 3.51
1357 1374 2.560542 CTGTAGTTGTGGCTCAGACTCT 59.439 50.000 7.37 1.37 0.00 3.24
1359 1376 1.001406 GCTGTAGTTGTGGCTCAGACT 59.999 52.381 0.00 8.60 0.00 3.24
1360 1377 1.433534 GCTGTAGTTGTGGCTCAGAC 58.566 55.000 0.00 0.00 0.00 3.51
1361 1378 0.038251 CGCTGTAGTTGTGGCTCAGA 60.038 55.000 0.00 0.00 0.00 3.27
1366 1383 3.011760 GCGTCGCTGTAGTTGTGGC 62.012 63.158 10.68 0.00 0.00 5.01
1368 1385 0.111266 GTTGCGTCGCTGTAGTTGTG 60.111 55.000 19.50 0.00 0.00 3.33
1369 1386 0.528901 TGTTGCGTCGCTGTAGTTGT 60.529 50.000 19.50 0.00 0.00 3.32
1373 1390 0.735978 TGGATGTTGCGTCGCTGTAG 60.736 55.000 19.50 0.00 0.00 2.74
1385 1402 0.527565 GCTTCGCCACATTGGATGTT 59.472 50.000 0.00 0.00 42.70 2.71
1418 1435 4.228567 TCGTGCAGAACCGTGGCA 62.229 61.111 0.00 0.00 34.70 4.92
1440 1457 4.452455 GTGGAGATTCATCACTTTCACGTT 59.548 41.667 0.00 0.00 0.00 3.99
1450 1467 0.752658 ATCGGCGTGGAGATTCATCA 59.247 50.000 6.85 0.00 0.00 3.07
1451 1468 1.000283 AGATCGGCGTGGAGATTCATC 60.000 52.381 6.85 0.00 0.00 2.92
1467 1484 0.820871 AACAGTCTCGGCTCCAGATC 59.179 55.000 0.00 0.00 0.00 2.75
1473 1490 0.590230 CGATCGAACAGTCTCGGCTC 60.590 60.000 10.26 3.55 39.35 4.70
1477 1494 2.025544 GATCCGATCGAACAGTCTCG 57.974 55.000 18.66 0.00 40.25 4.04
1488 1505 4.811557 AGGAAAATTGAAGACGATCCGATC 59.188 41.667 0.00 0.00 0.00 3.69
1489 1506 4.770795 AGGAAAATTGAAGACGATCCGAT 58.229 39.130 0.00 0.00 0.00 4.18
1490 1507 4.181578 GAGGAAAATTGAAGACGATCCGA 58.818 43.478 0.00 0.00 0.00 4.55
1491 1508 3.932710 TGAGGAAAATTGAAGACGATCCG 59.067 43.478 0.00 0.00 0.00 4.18
1492 1509 4.201724 CGTGAGGAAAATTGAAGACGATCC 60.202 45.833 0.00 0.00 0.00 3.36
1505 1535 1.598685 GAACCCGGCGTGAGGAAAA 60.599 57.895 6.01 0.00 0.00 2.29
1508 1538 3.691342 CTGAACCCGGCGTGAGGA 61.691 66.667 6.01 0.00 0.00 3.71
1529 1559 2.370824 TATCTTCGTCGTCCTCGCGC 62.371 60.000 0.00 0.00 36.87 6.86
1539 1569 6.638873 CACTCATACCTGATTGTATCTTCGTC 59.361 42.308 0.00 0.00 29.82 4.20
1541 1571 6.507900 ACACTCATACCTGATTGTATCTTCG 58.492 40.000 0.00 0.00 41.81 3.79
1543 1573 7.667575 AGACACTCATACCTGATTGTATCTT 57.332 36.000 0.00 0.00 43.13 2.40
1544 1574 7.343057 TCAAGACACTCATACCTGATTGTATCT 59.657 37.037 0.00 0.00 43.13 1.98
1548 1578 5.247110 AGTCAAGACACTCATACCTGATTGT 59.753 40.000 2.72 0.00 45.03 2.71
1549 1579 5.728471 AGTCAAGACACTCATACCTGATTG 58.272 41.667 2.72 0.00 37.89 2.67
1550 1580 5.105146 GGAGTCAAGACACTCATACCTGATT 60.105 44.000 2.72 0.00 44.18 2.57
1559 1589 2.101415 CACACAGGAGTCAAGACACTCA 59.899 50.000 2.72 0.00 44.18 3.41
1561 1591 1.414181 CCACACAGGAGTCAAGACACT 59.586 52.381 2.72 0.00 41.22 3.55
1563 1593 1.496060 ACCACACAGGAGTCAAGACA 58.504 50.000 2.72 0.00 41.22 3.41
1564 1594 3.746045 TTACCACACAGGAGTCAAGAC 57.254 47.619 0.00 0.00 41.22 3.01
1565 1595 4.160329 AGATTACCACACAGGAGTCAAGA 58.840 43.478 0.00 0.00 41.22 3.02
1566 1596 4.543590 AGATTACCACACAGGAGTCAAG 57.456 45.455 0.00 0.00 41.22 3.02
1567 1597 5.958380 AGATAGATTACCACACAGGAGTCAA 59.042 40.000 0.00 0.00 41.22 3.18
1568 1598 5.519808 AGATAGATTACCACACAGGAGTCA 58.480 41.667 0.00 0.00 41.22 3.41
1613 1655 4.344968 TCGATGGACATCAGGTTCATATGT 59.655 41.667 12.33 0.00 46.07 2.29
1614 1656 4.886579 TCGATGGACATCAGGTTCATATG 58.113 43.478 12.33 0.00 46.07 1.78
1616 1658 4.321230 CGATCGATGGACATCAGGTTCATA 60.321 45.833 10.26 0.00 46.07 2.15
1619 1661 2.034685 TCGATCGATGGACATCAGGTTC 59.965 50.000 15.15 2.96 37.69 3.62
1620 1662 2.031870 TCGATCGATGGACATCAGGTT 58.968 47.619 15.15 0.00 37.69 3.50
1621 1663 1.692411 TCGATCGATGGACATCAGGT 58.308 50.000 15.15 2.09 37.69 4.00
1622 1664 2.873609 GATCGATCGATGGACATCAGG 58.126 52.381 33.86 0.00 37.69 3.86
1636 1678 1.335182 ACACAAGCGAGATCGATCGAT 59.665 47.619 29.76 29.76 45.56 3.59
1640 1682 2.223595 CCTACACACAAGCGAGATCGAT 60.224 50.000 6.39 0.00 43.02 3.59
1648 1690 1.014044 ATGCGACCTACACACAAGCG 61.014 55.000 0.00 0.00 0.00 4.68
1652 1694 1.253100 TCTGATGCGACCTACACACA 58.747 50.000 0.00 0.00 0.00 3.72
1653 1695 2.263077 CTTCTGATGCGACCTACACAC 58.737 52.381 0.00 0.00 0.00 3.82
1655 1697 1.134965 AGCTTCTGATGCGACCTACAC 60.135 52.381 9.53 0.00 35.28 2.90
1667 1709 1.649321 ATCTCCACACCAGCTTCTGA 58.351 50.000 0.00 0.00 32.44 3.27
1671 1713 2.613977 CGAAGAATCTCCACACCAGCTT 60.614 50.000 0.00 0.00 0.00 3.74
1680 1722 1.218047 CGGTGGCGAAGAATCTCCA 59.782 57.895 0.00 0.00 38.11 3.86
1754 1796 1.634960 TACACCACATGGAGAACGGA 58.365 50.000 4.53 0.00 38.94 4.69
1757 1799 3.448686 CTCGATACACCACATGGAGAAC 58.551 50.000 4.53 0.00 38.94 3.01
1759 1801 1.409064 GCTCGATACACCACATGGAGA 59.591 52.381 4.53 0.00 38.94 3.71
1763 1805 0.933097 GCTGCTCGATACACCACATG 59.067 55.000 0.00 0.00 0.00 3.21
1770 1812 1.270826 GGATGCTAGCTGCTCGATACA 59.729 52.381 17.23 0.00 43.37 2.29
1802 1844 1.740380 GCAGCTTTCTCGACCATAGCA 60.740 52.381 0.00 0.00 34.37 3.49
1815 1857 4.940654 GTCTTCTATCTGAAAGGCAGCTTT 59.059 41.667 0.00 0.00 44.52 3.51
1902 1944 1.876156 GAACTTGAAGGTGGAGCAGTG 59.124 52.381 0.00 0.00 0.00 3.66
1904 1946 1.528129 GGAACTTGAAGGTGGAGCAG 58.472 55.000 0.00 0.00 0.00 4.24
1933 1975 1.402896 ATCATCATCCGACGCCCACT 61.403 55.000 0.00 0.00 0.00 4.00
1976 2025 1.295792 GAAACCGCTGAAGTCACACA 58.704 50.000 0.00 0.00 0.00 3.72
2007 2060 1.671845 AGATCGACAGCCTCTAACGAC 59.328 52.381 0.00 0.00 35.91 4.34
2037 2090 4.382147 GGAGTTGCTCTTATTTCCTCGTCT 60.382 45.833 0.00 0.00 0.00 4.18
2038 2091 3.866327 GGAGTTGCTCTTATTTCCTCGTC 59.134 47.826 0.00 0.00 0.00 4.20
2039 2092 3.260884 TGGAGTTGCTCTTATTTCCTCGT 59.739 43.478 0.00 0.00 0.00 4.18
2041 2094 5.003804 TGTTGGAGTTGCTCTTATTTCCTC 58.996 41.667 0.00 0.00 0.00 3.71
2044 2097 5.689383 TGTGTTGGAGTTGCTCTTATTTC 57.311 39.130 0.00 0.00 0.00 2.17
2045 2098 4.022849 GCTGTGTTGGAGTTGCTCTTATTT 60.023 41.667 0.00 0.00 0.00 1.40
2046 2099 3.503748 GCTGTGTTGGAGTTGCTCTTATT 59.496 43.478 0.00 0.00 0.00 1.40
2047 2100 3.077359 GCTGTGTTGGAGTTGCTCTTAT 58.923 45.455 0.00 0.00 0.00 1.73
2048 2101 2.494059 GCTGTGTTGGAGTTGCTCTTA 58.506 47.619 0.00 0.00 0.00 2.10
2049 2102 1.312815 GCTGTGTTGGAGTTGCTCTT 58.687 50.000 0.00 0.00 0.00 2.85
2052 2105 1.893808 CCGCTGTGTTGGAGTTGCT 60.894 57.895 0.00 0.00 0.00 3.91
2053 2106 2.117941 GACCGCTGTGTTGGAGTTGC 62.118 60.000 0.00 0.00 0.00 4.17
2054 2107 1.507141 GGACCGCTGTGTTGGAGTTG 61.507 60.000 0.00 0.00 0.00 3.16
2055 2108 1.227853 GGACCGCTGTGTTGGAGTT 60.228 57.895 0.00 0.00 0.00 3.01
2056 2109 1.978455 TTGGACCGCTGTGTTGGAGT 61.978 55.000 0.00 0.00 0.00 3.85
2059 2112 0.039256 CATTTGGACCGCTGTGTTGG 60.039 55.000 0.00 0.00 0.00 3.77
2060 2113 0.039256 CCATTTGGACCGCTGTGTTG 60.039 55.000 0.00 0.00 37.39 3.33
2062 2115 0.889186 GACCATTTGGACCGCTGTGT 60.889 55.000 3.01 0.00 38.94 3.72
2063 2116 1.586154 GGACCATTTGGACCGCTGTG 61.586 60.000 3.01 0.00 39.99 3.66
2065 2118 3.590824 GGACCATTTGGACCGCTG 58.409 61.111 3.01 0.00 39.99 5.18
2080 2136 0.951525 CACAAACGTACATGGCCGGA 60.952 55.000 5.05 0.00 0.00 5.14
2088 2144 2.604011 CTGAAACGGACACAAACGTACA 59.396 45.455 0.00 0.00 43.31 2.90
2091 2147 1.662122 GACTGAAACGGACACAAACGT 59.338 47.619 0.00 0.00 46.48 3.99
2153 2243 6.954616 CTGTTGCATTTTTCATCAGCATTA 57.045 33.333 0.00 0.00 34.87 1.90
2157 2247 3.717350 GCTGTTGCATTTTTCATCAGC 57.283 42.857 9.38 9.38 44.67 4.26
2389 2492 2.093658 TCAAGATTAAGGGTGACGAGCC 60.094 50.000 0.00 0.00 40.40 4.70
2823 2926 1.212616 CTAGCGGCGAATCAAAGAGG 58.787 55.000 12.98 0.00 0.00 3.69
2824 2927 0.579156 GCTAGCGGCGAATCAAAGAG 59.421 55.000 12.98 0.00 0.00 2.85
2825 2928 2.677971 GCTAGCGGCGAATCAAAGA 58.322 52.632 12.98 0.00 0.00 2.52
2847 2950 2.167281 CGTCCAATCTGAGATCAGTGGT 59.833 50.000 15.38 0.00 44.12 4.16
2856 2959 0.389817 TTGCGGACGTCCAATCTGAG 60.390 55.000 32.80 16.33 35.14 3.35
2858 2961 0.670546 ACTTGCGGACGTCCAATCTG 60.671 55.000 32.80 17.77 35.14 2.90
2859 2962 0.034896 AACTTGCGGACGTCCAATCT 59.965 50.000 32.80 10.00 35.14 2.40
2872 2975 3.186409 TGAATCTAACACGCTGAACTTGC 59.814 43.478 0.00 0.00 0.00 4.01
2873 2976 4.990543 TGAATCTAACACGCTGAACTTG 57.009 40.909 0.00 0.00 0.00 3.16
2877 2980 7.841915 TTCATAATGAATCTAACACGCTGAA 57.158 32.000 0.00 0.00 30.26 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.