Multiple sequence alignment - TraesCS5A01G251600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G251600 chr5A 100.000 5596 0 0 1 5596 467385492 467379897 0.000000e+00 10334.0
1 TraesCS5A01G251600 chr5A 96.000 50 1 1 3819 3868 143026361 143026313 4.650000e-11 80.5
2 TraesCS5A01G251600 chr5B 94.253 3219 118 32 940 4123 432177981 432174795 0.000000e+00 4857.0
3 TraesCS5A01G251600 chr5B 89.407 708 51 13 234 935 432178703 432178014 0.000000e+00 870.0
4 TraesCS5A01G251600 chr5B 81.319 455 38 21 4644 5081 432173135 432172711 5.410000e-85 326.0
5 TraesCS5A01G251600 chr5B 84.806 283 19 13 5260 5536 432156942 432156678 4.300000e-66 263.0
6 TraesCS5A01G251600 chr5B 89.697 165 12 3 5102 5261 432157134 432156970 7.350000e-49 206.0
7 TraesCS5A01G251600 chr5B 95.556 45 2 0 4580 4624 432173179 432173135 7.780000e-09 73.1
8 TraesCS5A01G251600 chr5B 100.000 30 0 0 1 30 278791914 278791943 7.830000e-04 56.5
9 TraesCS5A01G251600 chr5D 91.846 3385 176 45 928 4266 365701297 365697967 0.000000e+00 4630.0
10 TraesCS5A01G251600 chr5D 89.258 633 45 13 234 863 365701994 365701382 0.000000e+00 771.0
11 TraesCS5A01G251600 chr5D 86.330 673 54 22 4881 5536 365697008 365696357 0.000000e+00 699.0
12 TraesCS5A01G251600 chr5D 94.554 202 10 1 4580 4780 365697641 365697440 1.510000e-80 311.0
13 TraesCS5A01G251600 chr5D 96.000 50 1 1 3819 3868 127266552 127266504 4.650000e-11 80.5
14 TraesCS5A01G251600 chr3A 82.098 1849 192 56 1585 3391 91473148 91471397 0.000000e+00 1452.0
15 TraesCS5A01G251600 chr3A 86.528 772 95 8 1789 2556 135988600 135989366 0.000000e+00 841.0
16 TraesCS5A01G251600 chr3A 83.843 229 26 8 1285 1511 91473367 91473148 2.040000e-49 207.0
17 TraesCS5A01G251600 chr3B 84.656 1323 130 23 1585 2881 123618468 123619743 0.000000e+00 1251.0
18 TraesCS5A01G251600 chr3B 83.835 1064 149 15 1533 2590 542633135 542632089 0.000000e+00 990.0
19 TraesCS5A01G251600 chr3B 83.478 230 25 11 1285 1511 123618249 123618468 9.510000e-48 202.0
20 TraesCS5A01G251600 chr2A 83.608 1214 166 20 1381 2590 748875885 748874701 0.000000e+00 1109.0
21 TraesCS5A01G251600 chr7B 82.591 1212 176 20 1380 2584 720580043 720581226 0.000000e+00 1037.0
22 TraesCS5A01G251600 chrUn 84.553 984 124 13 1608 2584 296699180 296700142 0.000000e+00 950.0
23 TraesCS5A01G251600 chr7D 84.553 984 124 13 1608 2584 623465312 623464350 0.000000e+00 950.0
24 TraesCS5A01G251600 chr1A 86.494 770 97 6 1789 2556 581265820 581265056 0.000000e+00 839.0
25 TraesCS5A01G251600 chr3D 90.890 472 41 2 2274 2744 77397175 77397645 2.840000e-177 632.0
26 TraesCS5A01G251600 chr3D 84.000 225 24 10 1285 1507 77387757 77387971 7.350000e-49 206.0
27 TraesCS5A01G251600 chr2D 82.149 577 86 10 1380 1954 645268559 645269120 3.920000e-131 479.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G251600 chr5A 467379897 467385492 5595 True 10334.000 10334 100.00000 1 5596 1 chr5A.!!$R2 5595
1 TraesCS5A01G251600 chr5B 432172711 432178703 5992 True 1531.525 4857 90.13375 234 5081 4 chr5B.!!$R2 4847
2 TraesCS5A01G251600 chr5D 365696357 365701994 5637 True 1602.750 4630 90.49700 234 5536 4 chr5D.!!$R2 5302
3 TraesCS5A01G251600 chr3A 135988600 135989366 766 False 841.000 841 86.52800 1789 2556 1 chr3A.!!$F1 767
4 TraesCS5A01G251600 chr3A 91471397 91473367 1970 True 829.500 1452 82.97050 1285 3391 2 chr3A.!!$R1 2106
5 TraesCS5A01G251600 chr3B 542632089 542633135 1046 True 990.000 990 83.83500 1533 2590 1 chr3B.!!$R1 1057
6 TraesCS5A01G251600 chr3B 123618249 123619743 1494 False 726.500 1251 84.06700 1285 2881 2 chr3B.!!$F1 1596
7 TraesCS5A01G251600 chr2A 748874701 748875885 1184 True 1109.000 1109 83.60800 1381 2590 1 chr2A.!!$R1 1209
8 TraesCS5A01G251600 chr7B 720580043 720581226 1183 False 1037.000 1037 82.59100 1380 2584 1 chr7B.!!$F1 1204
9 TraesCS5A01G251600 chrUn 296699180 296700142 962 False 950.000 950 84.55300 1608 2584 1 chrUn.!!$F1 976
10 TraesCS5A01G251600 chr7D 623464350 623465312 962 True 950.000 950 84.55300 1608 2584 1 chr7D.!!$R1 976
11 TraesCS5A01G251600 chr1A 581265056 581265820 764 True 839.000 839 86.49400 1789 2556 1 chr1A.!!$R1 767
12 TraesCS5A01G251600 chr2D 645268559 645269120 561 False 479.000 479 82.14900 1380 1954 1 chr2D.!!$F1 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
67 68 0.101759 GTCCTTATACGCTCACCGCA 59.898 55.0 0.00 0.0 41.76 5.69 F
897 903 0.105039 GGACATAAGCGAGTGGGAGG 59.895 60.0 0.00 0.0 0.00 4.30 F
1573 1655 0.667792 GTCTCCTGTGCGGTTGACTC 60.668 60.0 0.00 0.0 35.79 3.36 F
2956 3143 0.608640 AGACGTTACTGCCTTCAGGG 59.391 55.0 0.00 0.0 44.54 4.45 F
3813 4033 0.035056 ATTCTTTCCAGAGCCGTGGG 60.035 55.0 2.17 0.0 38.26 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1513 1595 0.107831 TGGAAGTGAAGTGTTCCCGG 59.892 55.0 0.00 0.0 41.51 5.73 R
1983 2094 0.954452 ACTGTAGGCAAAGCAACAGC 59.046 50.0 17.95 0.0 43.24 4.40 R
3511 3726 0.542702 CTGTGGGCAGGGGACAAAAT 60.543 55.0 0.00 0.0 39.01 1.82 R
4499 5928 0.467384 GGCAGCCTCTATCAGCTTGA 59.533 55.0 3.29 0.0 37.18 3.02 R
5135 6964 0.034059 CCTTCCAAGACGCTGTCACT 59.966 55.0 10.52 0.0 34.60 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.927895 CGAGAAGGATCGAAACCCAG 58.072 55.000 8.14 0.00 45.56 4.45
26 27 1.476891 CGAGAAGGATCGAAACCCAGA 59.523 52.381 8.14 0.00 45.56 3.86
27 28 2.094182 CGAGAAGGATCGAAACCCAGAA 60.094 50.000 8.14 0.00 45.56 3.02
28 29 3.616560 CGAGAAGGATCGAAACCCAGAAA 60.617 47.826 8.14 0.00 45.56 2.52
29 30 4.324267 GAGAAGGATCGAAACCCAGAAAA 58.676 43.478 8.14 0.00 0.00 2.29
30 31 4.923415 AGAAGGATCGAAACCCAGAAAAT 58.077 39.130 8.14 0.00 0.00 1.82
31 32 6.062258 AGAAGGATCGAAACCCAGAAAATA 57.938 37.500 8.14 0.00 0.00 1.40
32 33 6.481643 AGAAGGATCGAAACCCAGAAAATAA 58.518 36.000 8.14 0.00 0.00 1.40
33 34 6.946009 AGAAGGATCGAAACCCAGAAAATAAA 59.054 34.615 8.14 0.00 0.00 1.40
34 35 6.510879 AGGATCGAAACCCAGAAAATAAAC 57.489 37.500 8.14 0.00 0.00 2.01
35 36 5.123344 AGGATCGAAACCCAGAAAATAAACG 59.877 40.000 8.14 0.00 0.00 3.60
36 37 4.149910 TCGAAACCCAGAAAATAAACGC 57.850 40.909 0.00 0.00 0.00 4.84
37 38 3.564644 TCGAAACCCAGAAAATAAACGCA 59.435 39.130 0.00 0.00 0.00 5.24
38 39 4.036498 TCGAAACCCAGAAAATAAACGCAA 59.964 37.500 0.00 0.00 0.00 4.85
39 40 4.740695 CGAAACCCAGAAAATAAACGCAAA 59.259 37.500 0.00 0.00 0.00 3.68
40 41 5.108027 CGAAACCCAGAAAATAAACGCAAAG 60.108 40.000 0.00 0.00 0.00 2.77
41 42 5.523438 AACCCAGAAAATAAACGCAAAGA 57.477 34.783 0.00 0.00 0.00 2.52
42 43 5.523438 ACCCAGAAAATAAACGCAAAGAA 57.477 34.783 0.00 0.00 0.00 2.52
43 44 5.528870 ACCCAGAAAATAAACGCAAAGAAG 58.471 37.500 0.00 0.00 0.00 2.85
44 45 5.300792 ACCCAGAAAATAAACGCAAAGAAGA 59.699 36.000 0.00 0.00 0.00 2.87
45 46 6.183360 ACCCAGAAAATAAACGCAAAGAAGAA 60.183 34.615 0.00 0.00 0.00 2.52
46 47 6.363357 CCCAGAAAATAAACGCAAAGAAGAAG 59.637 38.462 0.00 0.00 0.00 2.85
47 48 6.129088 CCAGAAAATAAACGCAAAGAAGAAGC 60.129 38.462 0.00 0.00 0.00 3.86
52 53 2.533318 CGCAAAGAAGAAGCGTCCT 58.467 52.632 0.00 0.00 45.82 3.85
53 54 0.868406 CGCAAAGAAGAAGCGTCCTT 59.132 50.000 0.00 0.00 45.82 3.36
54 55 2.066262 CGCAAAGAAGAAGCGTCCTTA 58.934 47.619 0.00 0.00 45.82 2.69
55 56 2.673368 CGCAAAGAAGAAGCGTCCTTAT 59.327 45.455 0.00 0.00 45.82 1.73
56 57 3.863424 CGCAAAGAAGAAGCGTCCTTATA 59.137 43.478 0.00 0.00 45.82 0.98
57 58 4.259850 CGCAAAGAAGAAGCGTCCTTATAC 60.260 45.833 0.00 0.00 45.82 1.47
58 59 4.259850 GCAAAGAAGAAGCGTCCTTATACG 60.260 45.833 0.00 0.00 45.58 3.06
65 66 3.159446 CGTCCTTATACGCTCACCG 57.841 57.895 0.00 0.00 44.21 4.94
66 67 0.933509 CGTCCTTATACGCTCACCGC 60.934 60.000 0.00 0.00 41.76 5.68
67 68 0.101759 GTCCTTATACGCTCACCGCA 59.898 55.000 0.00 0.00 41.76 5.69
68 69 0.101759 TCCTTATACGCTCACCGCAC 59.898 55.000 0.00 0.00 41.76 5.34
69 70 1.206745 CCTTATACGCTCACCGCACG 61.207 60.000 0.00 0.00 41.76 5.34
70 71 0.524816 CTTATACGCTCACCGCACGT 60.525 55.000 0.00 0.00 43.45 4.49
71 72 0.799152 TTATACGCTCACCGCACGTG 60.799 55.000 12.28 12.28 44.50 4.49
82 83 2.634777 GCACGTGCGGCACTAAAA 59.365 55.556 26.77 0.00 31.34 1.52
83 84 1.009449 GCACGTGCGGCACTAAAAA 60.009 52.632 26.77 0.00 31.34 1.94
84 85 0.996727 GCACGTGCGGCACTAAAAAG 60.997 55.000 26.77 15.38 31.34 2.27
85 86 0.584396 CACGTGCGGCACTAAAAAGA 59.416 50.000 28.42 0.00 31.34 2.52
86 87 1.003331 CACGTGCGGCACTAAAAAGAA 60.003 47.619 28.42 0.00 31.34 2.52
87 88 1.671845 ACGTGCGGCACTAAAAAGAAA 59.328 42.857 28.42 0.00 31.34 2.52
88 89 2.286772 ACGTGCGGCACTAAAAAGAAAG 60.287 45.455 28.42 12.67 31.34 2.62
89 90 2.032377 CGTGCGGCACTAAAAAGAAAGA 60.032 45.455 28.42 0.00 31.34 2.52
90 91 3.297472 GTGCGGCACTAAAAAGAAAGAC 58.703 45.455 25.08 0.00 0.00 3.01
91 92 3.003378 GTGCGGCACTAAAAAGAAAGACT 59.997 43.478 25.08 0.00 0.00 3.24
92 93 3.250040 TGCGGCACTAAAAAGAAAGACTC 59.750 43.478 0.00 0.00 0.00 3.36
93 94 3.498777 GCGGCACTAAAAAGAAAGACTCT 59.501 43.478 0.00 0.00 35.13 3.24
94 95 4.689345 GCGGCACTAAAAAGAAAGACTCTA 59.311 41.667 0.00 0.00 32.46 2.43
95 96 5.178809 GCGGCACTAAAAAGAAAGACTCTAA 59.821 40.000 0.00 0.00 32.46 2.10
96 97 6.591261 CGGCACTAAAAAGAAAGACTCTAAC 58.409 40.000 0.00 0.00 32.46 2.34
97 98 6.424207 CGGCACTAAAAAGAAAGACTCTAACT 59.576 38.462 0.00 0.00 32.46 2.24
98 99 7.597743 CGGCACTAAAAAGAAAGACTCTAACTA 59.402 37.037 0.00 0.00 32.46 2.24
99 100 8.927721 GGCACTAAAAAGAAAGACTCTAACTAG 58.072 37.037 0.00 0.00 32.46 2.57
100 101 9.478768 GCACTAAAAAGAAAGACTCTAACTAGT 57.521 33.333 0.00 0.00 32.46 2.57
106 107 9.491675 AAAAGAAAGACTCTAACTAGTTTAGCC 57.508 33.333 14.49 4.77 37.67 3.93
107 108 6.854778 AGAAAGACTCTAACTAGTTTAGCCG 58.145 40.000 14.49 6.57 37.67 5.52
108 109 5.579564 AAGACTCTAACTAGTTTAGCCGG 57.420 43.478 14.49 0.00 37.67 6.13
109 110 4.853007 AGACTCTAACTAGTTTAGCCGGA 58.147 43.478 14.49 2.85 37.67 5.14
110 111 4.883006 AGACTCTAACTAGTTTAGCCGGAG 59.117 45.833 14.49 13.08 37.67 4.63
111 112 3.380954 ACTCTAACTAGTTTAGCCGGAGC 59.619 47.826 14.49 0.00 37.67 4.70
112 113 2.357009 TCTAACTAGTTTAGCCGGAGCG 59.643 50.000 14.49 0.00 46.67 5.03
113 114 1.180029 AACTAGTTTAGCCGGAGCGA 58.820 50.000 5.05 0.00 46.67 4.93
114 115 1.180029 ACTAGTTTAGCCGGAGCGAA 58.820 50.000 5.05 0.00 46.67 4.70
115 116 1.134560 ACTAGTTTAGCCGGAGCGAAG 59.865 52.381 5.05 0.00 46.67 3.79
116 117 1.404391 CTAGTTTAGCCGGAGCGAAGA 59.596 52.381 5.05 0.00 46.67 2.87
117 118 0.108756 AGTTTAGCCGGAGCGAAGAC 60.109 55.000 5.05 0.00 46.67 3.01
118 119 0.389426 GTTTAGCCGGAGCGAAGACA 60.389 55.000 5.05 0.00 46.67 3.41
119 120 0.389426 TTTAGCCGGAGCGAAGACAC 60.389 55.000 5.05 0.00 46.67 3.67
120 121 2.221906 TTAGCCGGAGCGAAGACACC 62.222 60.000 5.05 0.00 46.67 4.16
122 123 3.744719 CCGGAGCGAAGACACCGA 61.745 66.667 0.00 0.00 46.94 4.69
123 124 2.202492 CGGAGCGAAGACACCGAG 60.202 66.667 0.00 0.00 46.94 4.63
124 125 2.507324 GGAGCGAAGACACCGAGC 60.507 66.667 0.00 0.00 0.00 5.03
125 126 2.507324 GAGCGAAGACACCGAGCC 60.507 66.667 0.00 0.00 0.00 4.70
126 127 2.992114 AGCGAAGACACCGAGCCT 60.992 61.111 0.00 0.00 0.00 4.58
127 128 2.811317 GCGAAGACACCGAGCCTG 60.811 66.667 0.00 0.00 0.00 4.85
128 129 2.811317 CGAAGACACCGAGCCTGC 60.811 66.667 0.00 0.00 0.00 4.85
129 130 2.435059 GAAGACACCGAGCCTGCC 60.435 66.667 0.00 0.00 0.00 4.85
130 131 3.240134 GAAGACACCGAGCCTGCCA 62.240 63.158 0.00 0.00 0.00 4.92
131 132 3.537206 AAGACACCGAGCCTGCCAC 62.537 63.158 0.00 0.00 0.00 5.01
149 150 4.477975 CGGGTGTCGGAGCGAGTC 62.478 72.222 0.00 0.00 36.23 3.36
150 151 4.131088 GGGTGTCGGAGCGAGTCC 62.131 72.222 0.00 0.00 42.85 3.85
157 158 3.474570 GGAGCGAGTCCATGGGCT 61.475 66.667 21.57 21.57 46.10 5.19
158 159 2.107953 GAGCGAGTCCATGGGCTC 59.892 66.667 32.67 32.67 44.24 4.70
161 162 4.899239 CGAGTCCATGGGCTCGCC 62.899 72.222 45.21 22.63 46.01 5.54
162 163 4.899239 GAGTCCATGGGCTCGCCG 62.899 72.222 29.73 0.00 36.85 6.46
164 165 4.241555 GTCCATGGGCTCGCCGAT 62.242 66.667 9.76 0.14 34.81 4.18
168 169 2.109799 ATGGGCTCGCCGATGAAG 59.890 61.111 4.56 0.00 33.21 3.02
169 170 4.838152 TGGGCTCGCCGATGAAGC 62.838 66.667 1.24 0.00 36.85 3.86
170 171 4.537433 GGGCTCGCCGATGAAGCT 62.537 66.667 1.24 0.00 36.85 3.74
171 172 2.512515 GGCTCGCCGATGAAGCTT 60.513 61.111 0.00 0.00 0.00 3.74
172 173 2.705826 GCTCGCCGATGAAGCTTG 59.294 61.111 2.10 0.00 0.00 4.01
173 174 2.817423 GCTCGCCGATGAAGCTTGG 61.817 63.158 2.10 0.00 0.00 3.61
174 175 1.153568 CTCGCCGATGAAGCTTGGA 60.154 57.895 2.10 0.00 0.00 3.53
175 176 1.424493 CTCGCCGATGAAGCTTGGAC 61.424 60.000 2.10 0.00 0.00 4.02
176 177 2.802667 CGCCGATGAAGCTTGGACG 61.803 63.158 2.10 6.23 0.00 4.79
177 178 2.464459 GCCGATGAAGCTTGGACGG 61.464 63.158 22.19 22.19 42.63 4.79
178 179 1.815421 CCGATGAAGCTTGGACGGG 60.815 63.158 20.09 6.39 37.28 5.28
179 180 1.218047 CGATGAAGCTTGGACGGGA 59.782 57.895 2.10 0.00 0.00 5.14
180 181 0.807667 CGATGAAGCTTGGACGGGAG 60.808 60.000 2.10 0.00 0.00 4.30
181 182 0.537188 GATGAAGCTTGGACGGGAGA 59.463 55.000 2.10 0.00 0.00 3.71
182 183 1.139853 GATGAAGCTTGGACGGGAGAT 59.860 52.381 2.10 0.00 0.00 2.75
183 184 1.860641 TGAAGCTTGGACGGGAGATA 58.139 50.000 2.10 0.00 0.00 1.98
184 185 2.184533 TGAAGCTTGGACGGGAGATAA 58.815 47.619 2.10 0.00 0.00 1.75
185 186 2.569853 TGAAGCTTGGACGGGAGATAAA 59.430 45.455 2.10 0.00 0.00 1.40
186 187 2.990066 AGCTTGGACGGGAGATAAAG 57.010 50.000 0.00 0.00 0.00 1.85
187 188 1.486726 AGCTTGGACGGGAGATAAAGG 59.513 52.381 0.00 0.00 0.00 3.11
188 189 1.209747 GCTTGGACGGGAGATAAAGGT 59.790 52.381 0.00 0.00 0.00 3.50
189 190 2.433239 GCTTGGACGGGAGATAAAGGTA 59.567 50.000 0.00 0.00 0.00 3.08
190 191 3.118519 GCTTGGACGGGAGATAAAGGTAA 60.119 47.826 0.00 0.00 0.00 2.85
191 192 4.444449 GCTTGGACGGGAGATAAAGGTAAT 60.444 45.833 0.00 0.00 0.00 1.89
192 193 4.950205 TGGACGGGAGATAAAGGTAATC 57.050 45.455 0.00 0.00 0.00 1.75
193 194 3.644738 TGGACGGGAGATAAAGGTAATCC 59.355 47.826 0.00 0.00 0.00 3.01
194 195 3.644738 GGACGGGAGATAAAGGTAATCCA 59.355 47.826 0.00 0.00 35.89 3.41
195 196 4.502777 GGACGGGAGATAAAGGTAATCCAC 60.503 50.000 0.00 0.00 35.89 4.02
196 197 4.035112 ACGGGAGATAAAGGTAATCCACA 58.965 43.478 0.00 0.00 35.89 4.17
197 198 4.141779 ACGGGAGATAAAGGTAATCCACAC 60.142 45.833 0.00 0.00 35.89 3.82
198 199 4.101119 CGGGAGATAAAGGTAATCCACACT 59.899 45.833 0.00 0.00 35.89 3.55
199 200 5.396436 CGGGAGATAAAGGTAATCCACACTT 60.396 44.000 0.00 0.00 35.89 3.16
200 201 5.823045 GGGAGATAAAGGTAATCCACACTTG 59.177 44.000 0.00 0.00 35.89 3.16
201 202 6.352737 GGGAGATAAAGGTAATCCACACTTGA 60.353 42.308 0.00 0.00 35.89 3.02
202 203 7.283329 GGAGATAAAGGTAATCCACACTTGAT 58.717 38.462 0.00 0.00 35.89 2.57
203 204 7.775561 GGAGATAAAGGTAATCCACACTTGATT 59.224 37.037 0.00 0.00 36.46 2.57
204 205 8.738645 AGATAAAGGTAATCCACACTTGATTC 57.261 34.615 0.00 0.00 34.43 2.52
205 206 8.328758 AGATAAAGGTAATCCACACTTGATTCA 58.671 33.333 0.00 0.00 34.43 2.57
206 207 9.125026 GATAAAGGTAATCCACACTTGATTCAT 57.875 33.333 0.00 0.00 34.43 2.57
207 208 6.764308 AAGGTAATCCACACTTGATTCATG 57.236 37.500 0.00 0.00 34.43 3.07
208 209 6.065976 AGGTAATCCACACTTGATTCATGA 57.934 37.500 6.56 0.00 34.43 3.07
209 210 6.666678 AGGTAATCCACACTTGATTCATGAT 58.333 36.000 0.00 0.00 34.43 2.45
210 211 6.544931 AGGTAATCCACACTTGATTCATGATG 59.455 38.462 0.00 0.00 34.43 3.07
211 212 4.913335 ATCCACACTTGATTCATGATGC 57.087 40.909 0.00 0.00 0.00 3.91
212 213 3.959293 TCCACACTTGATTCATGATGCT 58.041 40.909 0.00 0.00 0.00 3.79
213 214 3.943381 TCCACACTTGATTCATGATGCTC 59.057 43.478 0.00 0.00 0.00 4.26
214 215 3.692593 CCACACTTGATTCATGATGCTCA 59.307 43.478 0.00 0.00 0.00 4.26
215 216 4.438336 CCACACTTGATTCATGATGCTCAC 60.438 45.833 0.00 0.00 0.00 3.51
216 217 3.373130 ACACTTGATTCATGATGCTCACG 59.627 43.478 0.00 1.18 0.00 4.35
217 218 3.373130 CACTTGATTCATGATGCTCACGT 59.627 43.478 0.00 1.80 0.00 4.49
218 219 3.373130 ACTTGATTCATGATGCTCACGTG 59.627 43.478 9.94 9.94 0.00 4.49
219 220 3.249986 TGATTCATGATGCTCACGTGA 57.750 42.857 18.88 18.88 0.00 4.35
220 221 3.598299 TGATTCATGATGCTCACGTGAA 58.402 40.909 20.49 5.99 43.93 3.18
221 222 3.371898 TGATTCATGATGCTCACGTGAAC 59.628 43.478 20.49 16.13 43.06 3.18
222 223 2.453983 TCATGATGCTCACGTGAACA 57.546 45.000 22.73 22.73 31.57 3.18
223 224 2.340337 TCATGATGCTCACGTGAACAG 58.660 47.619 24.32 12.66 31.57 3.16
224 225 2.029110 TCATGATGCTCACGTGAACAGA 60.029 45.455 24.32 14.42 31.57 3.41
225 226 2.524569 TGATGCTCACGTGAACAGAA 57.475 45.000 24.32 13.56 0.00 3.02
226 227 3.044235 TGATGCTCACGTGAACAGAAT 57.956 42.857 24.32 11.64 0.00 2.40
227 228 2.995939 TGATGCTCACGTGAACAGAATC 59.004 45.455 24.32 19.11 0.00 2.52
228 229 2.820059 TGCTCACGTGAACAGAATCT 57.180 45.000 20.49 0.00 0.00 2.40
229 230 2.677199 TGCTCACGTGAACAGAATCTC 58.323 47.619 20.49 1.37 0.00 2.75
230 231 1.651138 GCTCACGTGAACAGAATCTCG 59.349 52.381 20.49 4.74 40.90 4.04
231 232 2.254459 CTCACGTGAACAGAATCTCGG 58.746 52.381 20.49 0.00 39.79 4.63
232 233 0.716108 CACGTGAACAGAATCTCGGC 59.284 55.000 10.90 0.00 39.79 5.54
335 338 8.748380 AAAATTCTCTCGGAAATAAAAAGCTG 57.252 30.769 0.00 0.00 37.49 4.24
336 339 4.946784 TCTCTCGGAAATAAAAAGCTGC 57.053 40.909 0.00 0.00 0.00 5.25
339 342 5.812642 TCTCTCGGAAATAAAAAGCTGCTAG 59.187 40.000 0.90 0.00 0.00 3.42
343 346 5.583457 TCGGAAATAAAAAGCTGCTAGTACC 59.417 40.000 0.90 0.00 0.00 3.34
378 381 2.415512 AGGTTTCTTGCGCGAAAGTATC 59.584 45.455 25.74 15.27 33.88 2.24
382 385 0.931005 CTTGCGCGAAAGTATCCCTC 59.069 55.000 19.18 0.00 0.00 4.30
441 444 5.264395 TCTTTCCTCCCATTTCAGAAATCC 58.736 41.667 5.32 0.00 0.00 3.01
448 451 2.624838 CCATTTCAGAAATCCATCCGGG 59.375 50.000 5.32 0.00 38.37 5.73
471 475 2.858344 CGATAAGTTCGTTTCTCGGCAT 59.142 45.455 0.00 0.00 43.01 4.40
512 516 4.947147 GCCACACGAAGCACCCCA 62.947 66.667 0.00 0.00 0.00 4.96
515 519 1.961277 CACACGAAGCACCCCAGAC 60.961 63.158 0.00 0.00 0.00 3.51
578 582 4.807039 ACCGTCCATACACGCGCC 62.807 66.667 5.73 0.00 38.52 6.53
594 598 3.941188 CCCCATGGACCGATCCCG 61.941 72.222 15.22 0.00 45.59 5.14
664 668 0.466189 GTCCATAGACCCCGTCCGTA 60.466 60.000 0.00 0.00 37.00 4.02
679 683 1.661821 CGTATAGACCTGCTGCGCC 60.662 63.158 4.18 0.00 0.00 6.53
724 728 0.372334 GCCGTGTGCGTACAAATAGG 59.628 55.000 8.25 10.70 38.82 2.57
869 874 2.223745 GAGGCGAGGACTAGTAGGAAG 58.776 57.143 0.00 0.00 0.00 3.46
874 879 2.356382 CGAGGACTAGTAGGAAGCACAG 59.644 54.545 0.00 0.00 0.00 3.66
878 884 1.827969 ACTAGTAGGAAGCACAGCCAG 59.172 52.381 1.45 0.00 0.00 4.85
881 887 0.391793 GTAGGAAGCACAGCCAGGAC 60.392 60.000 0.00 0.00 0.00 3.85
897 903 0.105039 GGACATAAGCGAGTGGGAGG 59.895 60.000 0.00 0.00 0.00 4.30
929 954 2.230940 CGCGCGAGTACCATTCAGG 61.231 63.158 28.94 0.00 45.67 3.86
935 960 3.573491 GTACCATTCAGGCGGCGC 61.573 66.667 26.17 26.17 43.14 6.53
976 1029 3.562732 CTCGGGTGGGGTGGTTTCC 62.563 68.421 0.00 0.00 0.00 3.13
1423 1501 2.028112 GCTTTCCCCTTTCCATTTGTCC 60.028 50.000 0.00 0.00 0.00 4.02
1438 1518 2.121832 TCCCCTTCCCTGCGAGAA 59.878 61.111 0.00 0.00 0.00 2.87
1513 1595 1.095228 TCCAAGGATTCCGCATTCGC 61.095 55.000 0.00 0.00 0.00 4.70
1522 1604 4.160635 CGCATTCGCCGGGAACAC 62.161 66.667 2.18 0.51 37.50 3.32
1573 1655 0.667792 GTCTCCTGTGCGGTTGACTC 60.668 60.000 0.00 0.00 35.79 3.36
1594 1676 6.500336 ACTCCTACTGATTCTAACCCTGTTA 58.500 40.000 0.00 0.00 0.00 2.41
1628 1717 4.319046 CGCCATTTGATCTTATCGGTTCTG 60.319 45.833 0.00 0.00 0.00 3.02
1753 1862 3.303395 GCATCTAATTTACTGCGCTGTCC 60.303 47.826 23.87 0.00 0.00 4.02
1795 1905 6.304356 TGCTGTTCAAATACTGAAACTGAG 57.696 37.500 0.00 0.00 45.67 3.35
1923 2033 4.630111 CTGATCCTAGGTCAGCATTTCTC 58.370 47.826 21.07 3.13 36.95 2.87
1954 2064 5.237344 GTCACTGCAGTTCTTAACAACTCAT 59.763 40.000 18.94 0.00 34.17 2.90
1955 2065 6.423905 GTCACTGCAGTTCTTAACAACTCATA 59.576 38.462 18.94 0.00 34.17 2.15
1959 2070 9.672673 ACTGCAGTTCTTAACAACTCATATAAT 57.327 29.630 15.25 0.00 34.17 1.28
1983 2094 3.119352 GGCTGCCTTTGTCTTATCCTTTG 60.119 47.826 12.43 0.00 0.00 2.77
2211 2330 5.048153 TCTCGTGATGTATCCGAATCATC 57.952 43.478 8.38 8.38 35.38 2.92
2788 2965 3.822735 CTGCTGGTGAAATATATGGTGGG 59.177 47.826 0.00 0.00 0.00 4.61
2886 3071 9.394477 CATGCTTATCATGTCTTTTATCATGTG 57.606 33.333 0.00 0.00 45.79 3.21
2887 3072 8.735692 TGCTTATCATGTCTTTTATCATGTGA 57.264 30.769 0.00 0.00 41.22 3.58
2888 3073 8.833493 TGCTTATCATGTCTTTTATCATGTGAG 58.167 33.333 0.00 0.00 41.22 3.51
2894 3081 9.538508 TCATGTCTTTTATCATGTGAGTATCTG 57.461 33.333 0.00 0.00 41.22 2.90
2956 3143 0.608640 AGACGTTACTGCCTTCAGGG 59.391 55.000 0.00 0.00 44.54 4.45
3095 3298 3.252215 CCATCGCAGGTACTTTTGTCAAA 59.748 43.478 0.00 0.00 34.60 2.69
3103 3306 5.010012 CAGGTACTTTTGTCAAATTCCAGCT 59.990 40.000 0.00 0.00 34.60 4.24
3171 3374 5.251700 AGACATAGAAGTTTGTCCCTTGGAT 59.748 40.000 3.12 0.00 42.56 3.41
3211 3415 7.787725 AAACTATTACCTCCTCGCATAAAAG 57.212 36.000 0.00 0.00 0.00 2.27
3242 3454 7.569639 AGAAAGAAAGGAAAGAAACACCTAC 57.430 36.000 0.00 0.00 33.34 3.18
3281 3493 1.738432 CTGCATGATCGCAATGTTCG 58.262 50.000 0.00 0.00 42.45 3.95
3300 3512 3.728845 TCGCAACCATTCTTATAGGAGC 58.271 45.455 0.00 0.00 0.00 4.70
3314 3526 2.125773 AGGAGCAGCAGGATTTTCTG 57.874 50.000 0.00 0.00 37.79 3.02
3324 3536 3.070878 GCAGGATTTTCTGAAACCCCAAA 59.929 43.478 17.17 0.00 36.93 3.28
3329 3542 8.102676 CAGGATTTTCTGAAACCCCAAATTTAT 58.897 33.333 17.17 1.10 36.93 1.40
3360 3573 8.839947 TTCATTTCAATTGCGTGATAATAGTG 57.160 30.769 0.00 0.00 0.00 2.74
3378 3592 4.778534 AGTGAAATGCCTGAAACATGAG 57.221 40.909 0.00 0.00 0.00 2.90
3379 3593 4.147321 AGTGAAATGCCTGAAACATGAGT 58.853 39.130 0.00 0.00 0.00 3.41
3500 3715 4.596311 GGCTTTGCCCCATTTTCG 57.404 55.556 0.00 0.00 44.06 3.46
3511 3726 3.004944 GCCCCATTTTCGTTCAACTGTTA 59.995 43.478 0.00 0.00 0.00 2.41
3524 3739 3.572255 TCAACTGTTATTTTGTCCCCTGC 59.428 43.478 0.00 0.00 0.00 4.85
3735 3950 2.563471 ACTTCTACGCGAATCCTCAC 57.437 50.000 15.93 0.00 0.00 3.51
3809 4024 1.813513 ACACATTCTTTCCAGAGCCG 58.186 50.000 0.00 0.00 0.00 5.52
3813 4033 0.035056 ATTCTTTCCAGAGCCGTGGG 60.035 55.000 2.17 0.00 38.26 4.61
3895 4115 1.610673 GGGACAGGCACCTGAGAGA 60.611 63.158 23.30 0.00 46.30 3.10
3909 4129 3.135348 CCTGAGAGAGATAAATGGTGCCA 59.865 47.826 0.00 0.00 0.00 4.92
3972 4198 5.157781 CAGTTCTTTTGTTGTTGTCGGAAA 58.842 37.500 0.00 0.00 0.00 3.13
3973 4199 5.631512 CAGTTCTTTTGTTGTTGTCGGAAAA 59.368 36.000 0.00 0.00 0.00 2.29
3974 4200 6.144724 CAGTTCTTTTGTTGTTGTCGGAAAAA 59.855 34.615 0.00 0.00 0.00 1.94
4031 4260 9.886132 TGATAGGAGTTAGAAGAAAATTACACC 57.114 33.333 0.00 0.00 0.00 4.16
4039 4268 6.105397 AGAAGAAAATTACACCCACGAGTA 57.895 37.500 0.00 0.00 0.00 2.59
4041 4270 5.733620 AGAAAATTACACCCACGAGTAGA 57.266 39.130 0.00 0.00 0.00 2.59
4043 4272 5.245526 AGAAAATTACACCCACGAGTAGAGT 59.754 40.000 0.00 0.00 0.00 3.24
4101 4335 8.086851 TGTGATGCATATACATACATTGTGAC 57.913 34.615 11.14 0.00 39.48 3.67
4106 4340 5.614668 GCATATACATACATTGTGACGGTGC 60.615 44.000 0.00 0.00 39.48 5.01
4108 4342 2.778299 ACATACATTGTGACGGTGCTT 58.222 42.857 0.00 0.00 37.11 3.91
4123 4357 2.550180 GGTGCTTGTCAGAAGTTCTTCC 59.450 50.000 1.56 0.00 0.00 3.46
4124 4358 3.206150 GTGCTTGTCAGAAGTTCTTCCA 58.794 45.455 1.56 0.00 0.00 3.53
4125 4359 3.817647 GTGCTTGTCAGAAGTTCTTCCAT 59.182 43.478 1.56 0.00 0.00 3.41
4126 4360 4.276926 GTGCTTGTCAGAAGTTCTTCCATT 59.723 41.667 1.56 0.00 0.00 3.16
4129 4363 5.470098 GCTTGTCAGAAGTTCTTCCATTGTA 59.530 40.000 1.56 0.00 0.00 2.41
4130 4364 6.017109 GCTTGTCAGAAGTTCTTCCATTGTAA 60.017 38.462 1.56 2.64 0.00 2.41
4156 4474 5.221303 ACACAGTTTGGATGATTTGGTTGAG 60.221 40.000 0.00 0.00 0.00 3.02
4185 4507 2.738587 TTGGTGTTTAGTTCTGGGCA 57.261 45.000 0.00 0.00 0.00 5.36
4190 4512 3.129287 GGTGTTTAGTTCTGGGCATGATG 59.871 47.826 0.00 0.00 0.00 3.07
4203 4525 4.771577 TGGGCATGATGTTTGTTACTGAAT 59.228 37.500 0.00 0.00 0.00 2.57
4210 4532 6.979465 TGATGTTTGTTACTGAATGCAATGA 58.021 32.000 0.00 0.00 0.00 2.57
4211 4533 7.432059 TGATGTTTGTTACTGAATGCAATGAA 58.568 30.769 0.00 0.00 0.00 2.57
4237 5603 4.740822 CCCCCGGTTTCTGCCCAG 62.741 72.222 0.00 0.00 0.00 4.45
4253 5619 2.879756 GCCCAGGCATGTTGACTTAGAA 60.880 50.000 3.12 0.00 29.42 2.10
4255 5621 2.416547 CCAGGCATGTTGACTTAGAACG 59.583 50.000 0.00 0.00 29.42 3.95
4256 5622 2.076863 AGGCATGTTGACTTAGAACGC 58.923 47.619 0.00 0.00 24.46 4.84
4257 5623 1.201921 GGCATGTTGACTTAGAACGCG 60.202 52.381 3.53 3.53 0.00 6.01
4258 5624 1.724623 GCATGTTGACTTAGAACGCGA 59.275 47.619 15.93 0.00 0.00 5.87
4259 5625 2.222596 GCATGTTGACTTAGAACGCGAG 60.223 50.000 15.93 0.36 0.00 5.03
4270 5636 2.665185 ACGCGAGTGGTCAAAGGC 60.665 61.111 15.93 0.00 46.97 4.35
4278 5644 2.952310 GAGTGGTCAAAGGCTTGAAACT 59.048 45.455 0.00 7.98 43.18 2.66
4281 5647 3.130340 GTGGTCAAAGGCTTGAAACTTGA 59.870 43.478 0.00 0.00 43.18 3.02
4285 5651 4.800471 GTCAAAGGCTTGAAACTTGAACAG 59.200 41.667 0.00 0.00 43.18 3.16
4294 5660 6.963805 GCTTGAAACTTGAACAGCTATCATAC 59.036 38.462 2.51 0.00 0.00 2.39
4308 5674 9.920133 ACAGCTATCATACACATAACTGATTAG 57.080 33.333 0.00 0.00 31.20 1.73
4349 5715 6.040955 TCAGTAGGAAATGATACATTCTCGCT 59.959 38.462 0.00 0.00 0.00 4.93
4351 5717 7.540400 CAGTAGGAAATGATACATTCTCGCTAG 59.460 40.741 0.00 0.00 0.00 3.42
4398 5796 4.696455 ACTTGCTGAAGAAAAACAATGGG 58.304 39.130 0.00 0.00 32.98 4.00
4400 5798 2.061028 GCTGAAGAAAAACAATGGGCG 58.939 47.619 0.00 0.00 0.00 6.13
4403 5801 2.035321 TGAAGAAAAACAATGGGCGGAC 59.965 45.455 0.00 0.00 0.00 4.79
4413 5811 0.677842 ATGGGCGGACGTAGGTATTC 59.322 55.000 0.00 0.00 0.00 1.75
4431 5829 5.577945 GGTATTCGAGACCGTGTTAATTGAA 59.422 40.000 3.08 0.00 37.05 2.69
4447 5845 9.349713 TGTTAATTGAAGTCTAAAATGACTGGT 57.650 29.630 0.00 0.00 45.49 4.00
4462 5882 3.279434 GACTGGTCACTTTTGGACTTGT 58.721 45.455 0.00 0.00 35.61 3.16
4465 5885 3.691575 TGGTCACTTTTGGACTTGTTGA 58.308 40.909 0.00 0.00 35.61 3.18
4477 5897 3.698040 GGACTTGTTGATCCATGCTGATT 59.302 43.478 0.00 0.00 34.87 2.57
4483 5903 5.472148 TGTTGATCCATGCTGATTTGTTTC 58.528 37.500 0.00 0.00 0.00 2.78
4509 5938 8.886719 CAGTATGATTTTGTTCTCAAGCTGATA 58.113 33.333 0.00 0.00 39.69 2.15
4519 5948 0.879400 CAAGCTGATAGAGGCTGCCG 60.879 60.000 13.96 0.00 38.91 5.69
4521 5950 1.144936 GCTGATAGAGGCTGCCGTT 59.855 57.895 13.96 8.13 0.00 4.44
4522 5951 1.156645 GCTGATAGAGGCTGCCGTTG 61.157 60.000 13.96 2.08 0.00 4.10
4523 5952 0.176680 CTGATAGAGGCTGCCGTTGT 59.823 55.000 13.96 3.62 0.00 3.32
4524 5953 0.613260 TGATAGAGGCTGCCGTTGTT 59.387 50.000 13.96 0.00 0.00 2.83
4527 5956 1.476845 TAGAGGCTGCCGTTGTTGGA 61.477 55.000 13.96 0.00 0.00 3.53
4528 5957 2.281761 AGGCTGCCGTTGTTGGAG 60.282 61.111 13.96 0.00 0.00 3.86
4530 5959 3.286751 GCTGCCGTTGTTGGAGCA 61.287 61.111 0.00 0.00 34.40 4.26
4536 5981 1.594293 CGTTGTTGGAGCACCTCGT 60.594 57.895 0.71 0.00 37.04 4.18
4547 5992 2.034879 CACCTCGTTCCGCAATGCT 61.035 57.895 2.94 0.00 0.00 3.79
4549 5994 1.741401 CCTCGTTCCGCAATGCTCA 60.741 57.895 2.94 0.00 0.00 4.26
4572 6017 2.443016 AGGGCTCCACTCGCCTAG 60.443 66.667 0.71 0.00 46.73 3.02
4577 6022 2.283604 TCCACTCGCCTAGGTGCA 60.284 61.111 18.01 5.93 32.68 4.57
4578 6023 2.185350 CCACTCGCCTAGGTGCAG 59.815 66.667 18.01 16.72 32.68 4.41
4635 6102 1.153597 TATTCAGTGCAGCGCCGATG 61.154 55.000 2.29 0.00 0.00 3.84
4821 6312 1.712401 TCGCGCCGTAACATAAAACT 58.288 45.000 0.00 0.00 0.00 2.66
4827 6318 3.063045 CGCCGTAACATAAAACTTCCTCC 59.937 47.826 0.00 0.00 0.00 4.30
4838 6655 7.612633 ACATAAAACTTCCTCCGCCTTTTATTA 59.387 33.333 0.00 0.00 28.85 0.98
4847 6664 7.764331 TCCTCCGCCTTTTATTAATTTGTTAC 58.236 34.615 0.00 0.00 0.00 2.50
4989 6811 2.098298 CGCGTTGCCGGATTTCAG 59.902 61.111 5.05 0.00 33.68 3.02
5018 6840 1.006571 TTTCACTCCGTCGCAGGTC 60.007 57.895 0.00 0.00 0.00 3.85
5038 6867 1.369091 GCGTCCATTTCGACATGCCT 61.369 55.000 6.02 0.00 32.74 4.75
5057 6886 3.552273 GCCTTTTTCTCTTCGGGGTTTTC 60.552 47.826 0.00 0.00 0.00 2.29
5065 6894 0.111639 TTCGGGGTTTTCCTTCCCAG 59.888 55.000 2.64 0.00 45.06 4.45
5085 6914 1.973281 ACATGTCAAAGGCCGCCAG 60.973 57.895 13.15 0.82 0.00 4.85
5102 6931 0.321122 CAGGTCAAGTCCACTGCTCC 60.321 60.000 0.00 0.00 0.00 4.70
5107 6936 1.202687 TCAAGTCCACTGCTCCACTTG 60.203 52.381 4.59 4.59 44.76 3.16
5108 6937 0.536006 AAGTCCACTGCTCCACTTGC 60.536 55.000 0.00 0.00 0.00 4.01
5109 6938 1.968540 GTCCACTGCTCCACTTGCC 60.969 63.158 0.00 0.00 0.00 4.52
5110 6939 2.674380 CCACTGCTCCACTTGCCC 60.674 66.667 0.00 0.00 0.00 5.36
5111 6940 2.674380 CACTGCTCCACTTGCCCC 60.674 66.667 0.00 0.00 0.00 5.80
5204 7033 1.298339 GCAATACAATGGACCGCGC 60.298 57.895 0.00 0.00 0.00 6.86
5215 7044 2.669569 ACCGCGCTTGCATCTTGT 60.670 55.556 5.56 0.00 39.07 3.16
5216 7045 2.099062 CCGCGCTTGCATCTTGTC 59.901 61.111 5.56 0.00 39.07 3.18
5217 7046 2.276244 CGCGCTTGCATCTTGTCG 60.276 61.111 5.56 0.00 39.07 4.35
5218 7047 2.575262 GCGCTTGCATCTTGTCGC 60.575 61.111 0.00 0.00 38.92 5.19
5220 7049 1.207339 CGCTTGCATCTTGTCGCAA 59.793 52.632 0.00 0.00 45.45 4.85
5223 7052 2.632643 TTGCATCTTGTCGCAAGCT 58.367 47.368 12.81 3.19 42.93 3.74
5224 7053 0.953727 TTGCATCTTGTCGCAAGCTT 59.046 45.000 12.81 0.00 42.93 3.74
5225 7054 0.239082 TGCATCTTGTCGCAAGCTTG 59.761 50.000 22.44 22.44 34.59 4.01
5226 7055 0.455633 GCATCTTGTCGCAAGCTTGG 60.456 55.000 27.10 17.00 37.18 3.61
5227 7056 1.159285 CATCTTGTCGCAAGCTTGGA 58.841 50.000 27.10 18.91 37.18 3.53
5231 7060 0.179059 TTGTCGCAAGCTTGGACTCA 60.179 50.000 30.84 21.69 32.88 3.41
5233 7062 0.319900 GTCGCAAGCTTGGACTCAGA 60.320 55.000 27.10 9.65 37.18 3.27
5235 7064 1.621301 CGCAAGCTTGGACTCAGACG 61.621 60.000 27.10 15.30 0.00 4.18
5236 7065 1.905922 GCAAGCTTGGACTCAGACGC 61.906 60.000 27.10 5.46 0.00 5.19
5237 7066 1.004440 AAGCTTGGACTCAGACGCC 60.004 57.895 0.00 0.00 0.00 5.68
5238 7067 2.435059 GCTTGGACTCAGACGCCC 60.435 66.667 0.00 0.00 0.00 6.13
5241 7070 2.549611 CTTGGACTCAGACGCCCTCG 62.550 65.000 0.00 0.00 42.43 4.63
5243 7072 3.444805 GACTCAGACGCCCTCGCT 61.445 66.667 0.00 0.00 39.84 4.93
5244 7073 2.992114 ACTCAGACGCCCTCGCTT 60.992 61.111 0.00 0.00 39.84 4.68
5247 7076 2.048222 CAGACGCCCTCGCTTCAA 60.048 61.111 0.00 0.00 35.76 2.69
5248 7077 1.667830 CAGACGCCCTCGCTTCAAA 60.668 57.895 0.00 0.00 35.76 2.69
5249 7078 1.070786 AGACGCCCTCGCTTCAAAA 59.929 52.632 0.00 0.00 35.76 2.44
5250 7079 0.534203 AGACGCCCTCGCTTCAAAAA 60.534 50.000 0.00 0.00 35.76 1.94
5252 7081 1.081442 CGCCCTCGCTTCAAAAACC 60.081 57.895 0.00 0.00 0.00 3.27
5253 7082 1.515521 CGCCCTCGCTTCAAAAACCT 61.516 55.000 0.00 0.00 0.00 3.50
5254 7083 0.673985 GCCCTCGCTTCAAAAACCTT 59.326 50.000 0.00 0.00 0.00 3.50
5255 7084 1.068588 GCCCTCGCTTCAAAAACCTTT 59.931 47.619 0.00 0.00 0.00 3.11
5256 7085 2.483013 GCCCTCGCTTCAAAAACCTTTT 60.483 45.455 0.00 0.00 0.00 2.27
5257 7086 3.381045 CCCTCGCTTCAAAAACCTTTTC 58.619 45.455 0.00 0.00 0.00 2.29
5258 7087 3.068165 CCCTCGCTTCAAAAACCTTTTCT 59.932 43.478 0.00 0.00 0.00 2.52
5271 7100 8.994170 CAAAAACCTTTTCTTGTTTAGTTCCAA 58.006 29.630 0.00 0.00 33.76 3.53
5272 7101 9.562408 AAAAACCTTTTCTTGTTTAGTTCCAAA 57.438 25.926 0.00 0.00 33.76 3.28
5280 7109 7.931578 TCTTGTTTAGTTCCAAAAAGAGTGA 57.068 32.000 0.00 0.00 0.00 3.41
5284 7113 3.584733 AGTTCCAAAAAGAGTGAGCCT 57.415 42.857 0.00 0.00 0.00 4.58
5296 7125 0.957888 GTGAGCCTCAAAGTCAGGGC 60.958 60.000 0.00 0.00 44.38 5.19
5313 7142 3.132289 CAGGGCCAGACTTCGAATTAGTA 59.868 47.826 6.18 0.00 0.00 1.82
5351 7181 2.825075 TTCCCGCATCACTGCTGCAT 62.825 55.000 1.31 0.00 46.65 3.96
5361 7196 3.994946 CTGCTGCATCGCAAGCGTG 62.995 63.158 14.57 12.45 39.80 5.34
5394 7229 0.800683 TAGCAAAGTCACGCGATCGG 60.801 55.000 15.93 9.59 40.69 4.18
5399 7234 1.874345 AAGTCACGCGATCGGGTCTT 61.874 55.000 31.96 27.63 41.33 3.01
5406 7241 1.898154 CGATCGGGTCTTGGAACCT 59.102 57.895 7.38 0.00 37.25 3.50
5416 7251 0.322906 CTTGGAACCTGCTTCTCCCC 60.323 60.000 0.00 0.00 0.00 4.81
5422 7257 2.266055 CTGCTTCTCCCCGTGTCC 59.734 66.667 0.00 0.00 0.00 4.02
5488 7323 1.445582 GCTACCAGAACCACCGACG 60.446 63.158 0.00 0.00 0.00 5.12
5491 7326 0.813184 TACCAGAACCACCGACGATC 59.187 55.000 0.00 0.00 0.00 3.69
5532 7373 8.131847 TCCATCCAATTCATTAACACAATTCA 57.868 30.769 0.00 0.00 0.00 2.57
5536 7377 8.586570 TCCAATTCATTAACACAATTCAACAC 57.413 30.769 0.00 0.00 0.00 3.32
5537 7378 8.200120 TCCAATTCATTAACACAATTCAACACA 58.800 29.630 0.00 0.00 0.00 3.72
5538 7379 8.991026 CCAATTCATTAACACAATTCAACACAT 58.009 29.630 0.00 0.00 0.00 3.21
5583 7424 7.744087 ACTCAACACAGATAATAGCAAAACA 57.256 32.000 0.00 0.00 0.00 2.83
5584 7425 7.810658 ACTCAACACAGATAATAGCAAAACAG 58.189 34.615 0.00 0.00 0.00 3.16
5585 7426 7.661437 ACTCAACACAGATAATAGCAAAACAGA 59.339 33.333 0.00 0.00 0.00 3.41
5586 7427 7.806690 TCAACACAGATAATAGCAAAACAGAC 58.193 34.615 0.00 0.00 0.00 3.51
5587 7428 7.443879 TCAACACAGATAATAGCAAAACAGACA 59.556 33.333 0.00 0.00 0.00 3.41
5588 7429 7.928307 ACACAGATAATAGCAAAACAGACAT 57.072 32.000 0.00 0.00 0.00 3.06
5589 7430 7.755591 ACACAGATAATAGCAAAACAGACATG 58.244 34.615 0.00 0.00 0.00 3.21
5590 7431 7.607607 ACACAGATAATAGCAAAACAGACATGA 59.392 33.333 0.00 0.00 0.00 3.07
5591 7432 8.121086 CACAGATAATAGCAAAACAGACATGAG 58.879 37.037 0.00 0.00 0.00 2.90
5592 7433 8.043113 ACAGATAATAGCAAAACAGACATGAGA 58.957 33.333 0.00 0.00 0.00 3.27
5593 7434 8.549548 CAGATAATAGCAAAACAGACATGAGAG 58.450 37.037 0.00 0.00 0.00 3.20
5594 7435 5.557891 AATAGCAAAACAGACATGAGAGC 57.442 39.130 0.00 0.00 0.00 4.09
5595 7436 3.137446 AGCAAAACAGACATGAGAGCT 57.863 42.857 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.476891 CTGGGTTTCGATCCTTCTCGA 59.523 52.381 7.03 0.00 45.32 4.04
6 7 1.476891 TCTGGGTTTCGATCCTTCTCG 59.523 52.381 7.03 0.00 39.99 4.04
7 8 3.611766 TTCTGGGTTTCGATCCTTCTC 57.388 47.619 7.03 0.00 0.00 2.87
8 9 4.367039 TTTTCTGGGTTTCGATCCTTCT 57.633 40.909 7.03 0.00 0.00 2.85
9 10 6.753107 TTATTTTCTGGGTTTCGATCCTTC 57.247 37.500 7.03 0.00 0.00 3.46
10 11 6.349033 CGTTTATTTTCTGGGTTTCGATCCTT 60.349 38.462 7.03 0.00 0.00 3.36
11 12 5.123344 CGTTTATTTTCTGGGTTTCGATCCT 59.877 40.000 7.03 0.00 0.00 3.24
12 13 5.329493 CGTTTATTTTCTGGGTTTCGATCC 58.671 41.667 0.00 0.00 0.00 3.36
13 14 4.791676 GCGTTTATTTTCTGGGTTTCGATC 59.208 41.667 0.00 0.00 0.00 3.69
14 15 4.216687 TGCGTTTATTTTCTGGGTTTCGAT 59.783 37.500 0.00 0.00 0.00 3.59
15 16 3.564644 TGCGTTTATTTTCTGGGTTTCGA 59.435 39.130 0.00 0.00 0.00 3.71
16 17 3.891324 TGCGTTTATTTTCTGGGTTTCG 58.109 40.909 0.00 0.00 0.00 3.46
17 18 5.980715 TCTTTGCGTTTATTTTCTGGGTTTC 59.019 36.000 0.00 0.00 0.00 2.78
18 19 5.908341 TCTTTGCGTTTATTTTCTGGGTTT 58.092 33.333 0.00 0.00 0.00 3.27
19 20 5.523438 TCTTTGCGTTTATTTTCTGGGTT 57.477 34.783 0.00 0.00 0.00 4.11
20 21 5.300792 TCTTCTTTGCGTTTATTTTCTGGGT 59.699 36.000 0.00 0.00 0.00 4.51
21 22 5.768317 TCTTCTTTGCGTTTATTTTCTGGG 58.232 37.500 0.00 0.00 0.00 4.45
22 23 6.129088 GCTTCTTCTTTGCGTTTATTTTCTGG 60.129 38.462 0.00 0.00 0.00 3.86
23 24 6.397894 CGCTTCTTCTTTGCGTTTATTTTCTG 60.398 38.462 0.00 0.00 44.00 3.02
24 25 5.625311 CGCTTCTTCTTTGCGTTTATTTTCT 59.375 36.000 0.00 0.00 44.00 2.52
25 26 5.822347 CGCTTCTTCTTTGCGTTTATTTTC 58.178 37.500 0.00 0.00 44.00 2.29
26 27 5.806089 CGCTTCTTCTTTGCGTTTATTTT 57.194 34.783 0.00 0.00 44.00 1.82
35 36 4.259850 CGTATAAGGACGCTTCTTCTTTGC 60.260 45.833 0.00 0.00 35.79 3.68
36 37 5.376947 CGTATAAGGACGCTTCTTCTTTG 57.623 43.478 0.00 0.00 35.79 2.77
47 48 0.933509 GCGGTGAGCGTATAAGGACG 60.934 60.000 5.77 0.00 45.70 4.79
48 49 2.882793 GCGGTGAGCGTATAAGGAC 58.117 57.895 5.77 0.00 35.41 3.85
65 66 0.996727 CTTTTTAGTGCCGCACGTGC 60.997 55.000 30.42 30.42 39.64 5.34
66 67 0.584396 TCTTTTTAGTGCCGCACGTG 59.416 50.000 17.64 12.28 39.64 4.49
67 68 1.301423 TTCTTTTTAGTGCCGCACGT 58.699 45.000 17.64 8.96 39.64 4.49
68 69 2.032377 TCTTTCTTTTTAGTGCCGCACG 60.032 45.455 17.64 2.79 39.64 5.34
69 70 3.003378 AGTCTTTCTTTTTAGTGCCGCAC 59.997 43.478 16.04 16.04 34.10 5.34
70 71 3.211045 AGTCTTTCTTTTTAGTGCCGCA 58.789 40.909 0.00 0.00 0.00 5.69
71 72 3.498777 AGAGTCTTTCTTTTTAGTGCCGC 59.501 43.478 0.00 0.00 29.61 6.53
72 73 6.424207 AGTTAGAGTCTTTCTTTTTAGTGCCG 59.576 38.462 0.00 0.00 37.36 5.69
73 74 7.731882 AGTTAGAGTCTTTCTTTTTAGTGCC 57.268 36.000 0.00 0.00 37.36 5.01
74 75 9.478768 ACTAGTTAGAGTCTTTCTTTTTAGTGC 57.521 33.333 0.00 0.00 37.36 4.40
80 81 9.491675 GGCTAAACTAGTTAGAGTCTTTCTTTT 57.508 33.333 8.92 0.00 41.70 2.27
81 82 7.813627 CGGCTAAACTAGTTAGAGTCTTTCTTT 59.186 37.037 8.92 0.00 41.70 2.52
82 83 7.314393 CGGCTAAACTAGTTAGAGTCTTTCTT 58.686 38.462 8.92 0.00 41.70 2.52
83 84 6.127675 CCGGCTAAACTAGTTAGAGTCTTTCT 60.128 42.308 8.92 0.00 41.70 2.52
84 85 6.035217 CCGGCTAAACTAGTTAGAGTCTTTC 58.965 44.000 8.92 0.00 41.70 2.62
85 86 5.713861 TCCGGCTAAACTAGTTAGAGTCTTT 59.286 40.000 8.92 0.00 41.70 2.52
86 87 5.259632 TCCGGCTAAACTAGTTAGAGTCTT 58.740 41.667 8.92 0.00 41.70 3.01
87 88 4.853007 TCCGGCTAAACTAGTTAGAGTCT 58.147 43.478 8.92 0.00 41.70 3.24
88 89 4.497842 GCTCCGGCTAAACTAGTTAGAGTC 60.498 50.000 8.92 9.96 41.70 3.36
89 90 3.380954 GCTCCGGCTAAACTAGTTAGAGT 59.619 47.826 8.92 0.00 41.70 3.24
90 91 3.548415 CGCTCCGGCTAAACTAGTTAGAG 60.548 52.174 8.92 10.47 41.70 2.43
91 92 2.357009 CGCTCCGGCTAAACTAGTTAGA 59.643 50.000 8.92 0.00 41.70 2.10
92 93 2.357009 TCGCTCCGGCTAAACTAGTTAG 59.643 50.000 8.92 7.95 42.01 2.34
93 94 2.368439 TCGCTCCGGCTAAACTAGTTA 58.632 47.619 8.92 0.00 36.09 2.24
94 95 1.180029 TCGCTCCGGCTAAACTAGTT 58.820 50.000 1.12 1.12 36.09 2.24
95 96 1.134560 CTTCGCTCCGGCTAAACTAGT 59.865 52.381 0.00 0.00 36.09 2.57
96 97 1.404391 TCTTCGCTCCGGCTAAACTAG 59.596 52.381 0.00 0.00 36.09 2.57
97 98 1.133790 GTCTTCGCTCCGGCTAAACTA 59.866 52.381 0.00 0.00 36.09 2.24
98 99 0.108756 GTCTTCGCTCCGGCTAAACT 60.109 55.000 0.00 0.00 36.09 2.66
99 100 0.389426 TGTCTTCGCTCCGGCTAAAC 60.389 55.000 0.00 0.00 36.09 2.01
100 101 0.389426 GTGTCTTCGCTCCGGCTAAA 60.389 55.000 0.00 0.00 36.09 1.85
101 102 1.214589 GTGTCTTCGCTCCGGCTAA 59.785 57.895 0.00 0.00 36.09 3.09
102 103 2.707849 GGTGTCTTCGCTCCGGCTA 61.708 63.158 0.00 0.00 36.09 3.93
103 104 4.070552 GGTGTCTTCGCTCCGGCT 62.071 66.667 0.00 0.00 36.09 5.52
105 106 3.685214 CTCGGTGTCTTCGCTCCGG 62.685 68.421 0.00 0.00 43.30 5.14
106 107 2.202492 CTCGGTGTCTTCGCTCCG 60.202 66.667 0.00 0.00 44.12 4.63
107 108 2.507324 GCTCGGTGTCTTCGCTCC 60.507 66.667 0.00 0.00 0.00 4.70
108 109 2.507324 GGCTCGGTGTCTTCGCTC 60.507 66.667 0.00 0.00 0.00 5.03
109 110 2.992114 AGGCTCGGTGTCTTCGCT 60.992 61.111 0.00 0.00 0.00 4.93
110 111 2.811317 CAGGCTCGGTGTCTTCGC 60.811 66.667 0.00 0.00 0.00 4.70
111 112 2.811317 GCAGGCTCGGTGTCTTCG 60.811 66.667 0.00 0.00 0.00 3.79
112 113 2.435059 GGCAGGCTCGGTGTCTTC 60.435 66.667 0.00 0.00 0.00 2.87
113 114 3.241530 TGGCAGGCTCGGTGTCTT 61.242 61.111 0.00 0.00 0.00 3.01
114 115 4.008933 GTGGCAGGCTCGGTGTCT 62.009 66.667 0.00 0.00 0.00 3.41
132 133 4.477975 GACTCGCTCCGACACCCG 62.478 72.222 0.00 0.00 38.18 5.28
133 134 4.131088 GGACTCGCTCCGACACCC 62.131 72.222 0.00 0.00 0.00 4.61
134 135 2.711922 ATGGACTCGCTCCGACACC 61.712 63.158 0.00 0.00 43.03 4.16
135 136 1.517257 CATGGACTCGCTCCGACAC 60.517 63.158 0.00 0.00 43.03 3.67
136 137 2.710902 CCATGGACTCGCTCCGACA 61.711 63.158 5.56 0.00 43.03 4.35
137 138 2.105128 CCATGGACTCGCTCCGAC 59.895 66.667 5.56 0.00 43.03 4.79
138 139 3.147595 CCCATGGACTCGCTCCGA 61.148 66.667 15.22 0.00 43.03 4.55
139 140 4.899239 GCCCATGGACTCGCTCCG 62.899 72.222 15.22 0.00 43.03 4.63
140 141 3.453070 GAGCCCATGGACTCGCTCC 62.453 68.421 23.11 10.39 41.52 4.70
141 142 2.107953 GAGCCCATGGACTCGCTC 59.892 66.667 20.50 20.50 40.82 5.03
145 146 4.899239 CGGCGAGCCCATGGACTC 62.899 72.222 17.61 17.61 0.00 3.36
147 148 4.241555 ATCGGCGAGCCCATGGAC 62.242 66.667 15.22 0.00 0.00 4.02
148 149 4.240103 CATCGGCGAGCCCATGGA 62.240 66.667 15.22 3.18 0.00 3.41
149 150 3.755526 TTCATCGGCGAGCCCATGG 62.756 63.158 17.22 4.14 0.00 3.66
150 151 2.203056 TTCATCGGCGAGCCCATG 60.203 61.111 17.22 14.27 0.00 3.66
151 152 2.109799 CTTCATCGGCGAGCCCAT 59.890 61.111 17.22 0.00 0.00 4.00
152 153 4.838152 GCTTCATCGGCGAGCCCA 62.838 66.667 17.22 0.00 0.00 5.36
153 154 4.537433 AGCTTCATCGGCGAGCCC 62.537 66.667 17.22 1.68 37.11 5.19
154 155 2.512515 AAGCTTCATCGGCGAGCC 60.513 61.111 17.22 3.59 37.11 4.70
155 156 2.705826 CAAGCTTCATCGGCGAGC 59.294 61.111 17.22 13.46 36.68 5.03
156 157 1.153568 TCCAAGCTTCATCGGCGAG 60.154 57.895 17.22 7.89 34.52 5.03
157 158 1.447838 GTCCAAGCTTCATCGGCGA 60.448 57.895 13.87 13.87 34.52 5.54
158 159 2.802667 CGTCCAAGCTTCATCGGCG 61.803 63.158 0.00 0.00 34.52 6.46
159 160 2.464459 CCGTCCAAGCTTCATCGGC 61.464 63.158 16.10 3.43 0.00 5.54
160 161 1.815421 CCCGTCCAAGCTTCATCGG 60.815 63.158 19.41 19.41 38.05 4.18
161 162 0.807667 CTCCCGTCCAAGCTTCATCG 60.808 60.000 0.00 1.17 0.00 3.84
162 163 0.537188 TCTCCCGTCCAAGCTTCATC 59.463 55.000 0.00 0.00 0.00 2.92
163 164 1.207791 ATCTCCCGTCCAAGCTTCAT 58.792 50.000 0.00 0.00 0.00 2.57
164 165 1.860641 TATCTCCCGTCCAAGCTTCA 58.139 50.000 0.00 0.00 0.00 3.02
165 166 2.981859 TTATCTCCCGTCCAAGCTTC 57.018 50.000 0.00 0.00 0.00 3.86
166 167 2.092914 CCTTTATCTCCCGTCCAAGCTT 60.093 50.000 0.00 0.00 0.00 3.74
167 168 1.486726 CCTTTATCTCCCGTCCAAGCT 59.513 52.381 0.00 0.00 0.00 3.74
168 169 1.209747 ACCTTTATCTCCCGTCCAAGC 59.790 52.381 0.00 0.00 0.00 4.01
169 170 4.748277 TTACCTTTATCTCCCGTCCAAG 57.252 45.455 0.00 0.00 0.00 3.61
170 171 4.102054 GGATTACCTTTATCTCCCGTCCAA 59.898 45.833 0.00 0.00 0.00 3.53
171 172 3.644738 GGATTACCTTTATCTCCCGTCCA 59.355 47.826 0.00 0.00 0.00 4.02
172 173 3.644738 TGGATTACCTTTATCTCCCGTCC 59.355 47.826 0.00 0.00 37.04 4.79
173 174 4.100498 TGTGGATTACCTTTATCTCCCGTC 59.900 45.833 0.00 0.00 37.04 4.79
174 175 4.035112 TGTGGATTACCTTTATCTCCCGT 58.965 43.478 0.00 0.00 37.04 5.28
175 176 4.101119 AGTGTGGATTACCTTTATCTCCCG 59.899 45.833 0.00 0.00 37.04 5.14
176 177 5.632034 AGTGTGGATTACCTTTATCTCCC 57.368 43.478 0.00 0.00 37.04 4.30
177 178 6.650120 TCAAGTGTGGATTACCTTTATCTCC 58.350 40.000 0.00 0.00 37.04 3.71
178 179 8.738645 AATCAAGTGTGGATTACCTTTATCTC 57.261 34.615 0.00 0.00 33.40 2.75
179 180 8.328758 TGAATCAAGTGTGGATTACCTTTATCT 58.671 33.333 0.00 0.00 35.23 1.98
180 181 8.506168 TGAATCAAGTGTGGATTACCTTTATC 57.494 34.615 0.00 0.00 35.23 1.75
181 182 8.906867 CATGAATCAAGTGTGGATTACCTTTAT 58.093 33.333 0.00 0.00 35.23 1.40
182 183 8.106462 TCATGAATCAAGTGTGGATTACCTTTA 58.894 33.333 0.00 0.00 35.23 1.85
183 184 6.947733 TCATGAATCAAGTGTGGATTACCTTT 59.052 34.615 0.00 0.00 35.23 3.11
184 185 6.484288 TCATGAATCAAGTGTGGATTACCTT 58.516 36.000 0.00 0.00 35.23 3.50
185 186 6.065976 TCATGAATCAAGTGTGGATTACCT 57.934 37.500 0.00 0.00 35.23 3.08
186 187 6.732154 CATCATGAATCAAGTGTGGATTACC 58.268 40.000 0.00 0.00 35.23 2.85
187 188 6.039047 AGCATCATGAATCAAGTGTGGATTAC 59.961 38.462 0.00 0.00 35.23 1.89
188 189 6.124340 AGCATCATGAATCAAGTGTGGATTA 58.876 36.000 0.00 0.00 35.23 1.75
189 190 4.954202 AGCATCATGAATCAAGTGTGGATT 59.046 37.500 0.00 0.00 37.67 3.01
190 191 4.533815 AGCATCATGAATCAAGTGTGGAT 58.466 39.130 0.00 0.00 0.00 3.41
191 192 3.943381 GAGCATCATGAATCAAGTGTGGA 59.057 43.478 0.00 0.00 33.17 4.02
192 193 3.692593 TGAGCATCATGAATCAAGTGTGG 59.307 43.478 0.00 0.00 42.56 4.17
193 194 4.957759 TGAGCATCATGAATCAAGTGTG 57.042 40.909 0.00 0.00 42.56 3.82
207 208 3.257393 AGATTCTGTTCACGTGAGCATC 58.743 45.455 31.18 25.26 34.81 3.91
208 209 3.257393 GAGATTCTGTTCACGTGAGCAT 58.743 45.455 31.18 19.29 34.81 3.79
209 210 2.677199 GAGATTCTGTTCACGTGAGCA 58.323 47.619 29.54 29.54 34.17 4.26
210 211 1.651138 CGAGATTCTGTTCACGTGAGC 59.349 52.381 23.71 23.71 0.00 4.26
211 212 2.254459 CCGAGATTCTGTTCACGTGAG 58.746 52.381 19.11 7.68 0.00 3.51
212 213 1.668919 GCCGAGATTCTGTTCACGTGA 60.669 52.381 15.76 15.76 0.00 4.35
213 214 0.716108 GCCGAGATTCTGTTCACGTG 59.284 55.000 9.94 9.94 0.00 4.49
214 215 0.317160 TGCCGAGATTCTGTTCACGT 59.683 50.000 0.00 0.00 0.00 4.49
215 216 0.994995 CTGCCGAGATTCTGTTCACG 59.005 55.000 0.00 0.00 0.00 4.35
216 217 0.723981 GCTGCCGAGATTCTGTTCAC 59.276 55.000 0.00 0.00 0.00 3.18
217 218 0.610174 AGCTGCCGAGATTCTGTTCA 59.390 50.000 0.00 0.00 0.00 3.18
218 219 1.731720 AAGCTGCCGAGATTCTGTTC 58.268 50.000 0.00 0.00 0.00 3.18
219 220 1.808945 CAAAGCTGCCGAGATTCTGTT 59.191 47.619 0.00 0.00 0.00 3.16
220 221 1.002430 TCAAAGCTGCCGAGATTCTGT 59.998 47.619 0.00 0.00 0.00 3.41
221 222 1.730501 TCAAAGCTGCCGAGATTCTG 58.269 50.000 0.00 0.00 0.00 3.02
222 223 2.706339 ATCAAAGCTGCCGAGATTCT 57.294 45.000 0.00 0.00 0.00 2.40
223 224 3.364764 GCATATCAAAGCTGCCGAGATTC 60.365 47.826 0.00 0.00 0.00 2.52
224 225 2.551459 GCATATCAAAGCTGCCGAGATT 59.449 45.455 0.00 0.00 0.00 2.40
225 226 2.149578 GCATATCAAAGCTGCCGAGAT 58.850 47.619 0.00 0.00 0.00 2.75
226 227 1.586422 GCATATCAAAGCTGCCGAGA 58.414 50.000 0.00 0.00 0.00 4.04
227 228 0.234106 CGCATATCAAAGCTGCCGAG 59.766 55.000 0.00 0.00 32.24 4.63
228 229 0.179086 TCGCATATCAAAGCTGCCGA 60.179 50.000 0.00 0.00 32.24 5.54
229 230 0.657312 TTCGCATATCAAAGCTGCCG 59.343 50.000 0.00 0.00 32.24 5.69
230 231 2.454055 GTTTCGCATATCAAAGCTGCC 58.546 47.619 0.00 0.00 32.24 4.85
231 232 2.159393 TGGTTTCGCATATCAAAGCTGC 60.159 45.455 0.00 0.00 32.37 5.25
232 233 3.763097 TGGTTTCGCATATCAAAGCTG 57.237 42.857 0.00 0.00 32.37 4.24
335 338 2.233922 TGCTTTCTGAGGTGGTACTAGC 59.766 50.000 0.00 0.00 0.00 3.42
336 339 4.499183 CTTGCTTTCTGAGGTGGTACTAG 58.501 47.826 0.00 0.00 0.00 2.57
339 342 2.224548 ACCTTGCTTTCTGAGGTGGTAC 60.225 50.000 0.00 0.00 42.04 3.34
343 346 3.217626 AGAAACCTTGCTTTCTGAGGTG 58.782 45.455 0.00 0.00 42.78 4.00
369 372 1.287425 GTTGCCGAGGGATACTTTCG 58.713 55.000 0.00 0.00 41.23 3.46
372 375 1.153429 GCGTTGCCGAGGGATACTT 60.153 57.895 0.00 0.00 35.63 2.24
378 381 3.958147 ATGTCTGCGTTGCCGAGGG 62.958 63.158 0.00 0.00 35.63 4.30
382 385 2.096406 CGAATGTCTGCGTTGCCG 59.904 61.111 0.00 0.00 37.07 5.69
441 444 0.944311 CGAACTTATCGCCCCGGATG 60.944 60.000 0.73 0.00 45.89 3.51
489 493 1.071299 TGCTTCGTGTGGCTGACAT 59.929 52.632 0.00 0.00 36.78 3.06
490 494 1.887242 GTGCTTCGTGTGGCTGACA 60.887 57.895 0.00 0.00 0.00 3.58
512 516 3.054503 CGGGGTCGTCTGTCGTCT 61.055 66.667 0.00 0.00 40.80 4.18
594 598 4.459089 GCCAGAGGGACGTGAGCC 62.459 72.222 0.00 0.00 35.59 4.70
635 639 1.755395 TCTATGGACCGGTGGGACG 60.755 63.158 14.63 0.00 36.97 4.79
700 704 3.777925 GTACGCACACGGCAGCAG 61.778 66.667 0.00 0.00 46.04 4.24
836 841 2.125633 GCCTCCTCGTCGAAACCC 60.126 66.667 0.00 0.00 0.00 4.11
869 874 1.709147 CGCTTATGTCCTGGCTGTGC 61.709 60.000 0.00 0.00 0.00 4.57
874 879 0.811616 CCACTCGCTTATGTCCTGGC 60.812 60.000 0.00 0.00 0.00 4.85
878 884 0.105039 CCTCCCACTCGCTTATGTCC 59.895 60.000 0.00 0.00 0.00 4.02
881 887 0.390860 CTCCCTCCCACTCGCTTATG 59.609 60.000 0.00 0.00 0.00 1.90
897 903 2.897350 CGCGATCAAAGCCCCTCC 60.897 66.667 0.00 0.00 0.00 4.30
937 962 2.894919 GAGCGGGTAAGGCGGTAA 59.105 61.111 0.00 0.00 35.00 2.85
938 963 3.520862 CGAGCGGGTAAGGCGGTA 61.521 66.667 0.00 0.00 35.00 4.02
1279 1356 2.291741 AGCAAAAGAAGCAGGAAACGAG 59.708 45.455 0.00 0.00 0.00 4.18
1283 1360 1.963515 GGGAGCAAAAGAAGCAGGAAA 59.036 47.619 0.00 0.00 0.00 3.13
1423 1501 1.227380 CGATTCTCGCAGGGAAGGG 60.227 63.158 0.00 0.00 31.14 3.95
1513 1595 0.107831 TGGAAGTGAAGTGTTCCCGG 59.892 55.000 0.00 0.00 41.51 5.73
1522 1604 2.322355 ATCGAGCCATGGAAGTGAAG 57.678 50.000 18.40 0.00 0.00 3.02
1573 1655 6.540438 TGTAACAGGGTTAGAATCAGTAGG 57.460 41.667 0.00 0.00 0.00 3.18
1594 1676 0.392998 CAAATGGCGGTAGAGGCTGT 60.393 55.000 0.00 0.00 37.59 4.40
1628 1717 6.861065 TTGTTCTTGTAGATTCCTGAACAC 57.139 37.500 0.00 0.00 41.90 3.32
1716 1825 5.723492 TTAGATGCATTGAGATTGTCACG 57.277 39.130 0.00 0.00 33.71 4.35
1954 2064 3.951563 AGACAAAGGCAGCCCATTATA 57.048 42.857 8.22 0.00 0.00 0.98
1955 2065 2.834638 AGACAAAGGCAGCCCATTAT 57.165 45.000 8.22 0.00 0.00 1.28
1959 2070 1.340991 GGATAAGACAAAGGCAGCCCA 60.341 52.381 8.22 0.00 0.00 5.36
1983 2094 0.954452 ACTGTAGGCAAAGCAACAGC 59.046 50.000 17.95 0.00 43.24 4.40
2211 2330 5.480642 AGAATCACTATCTGGGTATGCAG 57.519 43.478 0.00 0.00 0.00 4.41
2226 2345 8.161699 TCCCAAAAACAACTACTTAGAATCAC 57.838 34.615 0.00 0.00 0.00 3.06
2788 2965 1.271656 AGTGCAGCCATTCTTCTTTGC 59.728 47.619 0.00 0.00 0.00 3.68
2880 3065 9.725019 ACAAATAAACTTCAGATACTCACATGA 57.275 29.630 0.00 0.00 0.00 3.07
2922 3109 5.715753 AGTAACGTCTCCTTTCTTACCTGAT 59.284 40.000 0.00 0.00 0.00 2.90
2923 3110 5.048224 CAGTAACGTCTCCTTTCTTACCTGA 60.048 44.000 0.00 0.00 0.00 3.86
2924 3111 5.162075 CAGTAACGTCTCCTTTCTTACCTG 58.838 45.833 0.00 0.00 0.00 4.00
2925 3112 4.321824 GCAGTAACGTCTCCTTTCTTACCT 60.322 45.833 0.00 0.00 0.00 3.08
2956 3143 2.306847 TGGTTCTGGAAAAACCTGAGC 58.693 47.619 6.59 0.00 45.31 4.26
3095 3298 5.047092 CACATAACAAGGGAAAAGCTGGAAT 60.047 40.000 0.00 0.00 0.00 3.01
3103 3306 5.197451 ACAGTGTCACATAACAAGGGAAAA 58.803 37.500 5.62 0.00 0.00 2.29
3211 3415 9.639601 TGTTTCTTTCCTTTCTTTCTTTCTTTC 57.360 29.630 0.00 0.00 0.00 2.62
3242 3454 2.682846 TGGCATGGGGCAGGTAAG 59.317 61.111 0.00 0.00 45.76 2.34
3281 3493 3.251972 GCTGCTCCTATAAGAATGGTTGC 59.748 47.826 0.00 0.00 0.00 4.17
3300 3512 2.232208 GGGGTTTCAGAAAATCCTGCTG 59.768 50.000 13.36 0.00 44.01 4.41
3329 3542 9.631452 TTATCACGCAATTGAAATGAAACATTA 57.369 25.926 10.34 0.00 0.00 1.90
3360 3573 7.062605 CACAATAACTCATGTTTCAGGCATTTC 59.937 37.037 0.00 0.00 37.59 2.17
3436 3650 3.299503 ACATCCCAAAGTTTCAGCTTGT 58.700 40.909 0.00 0.00 0.00 3.16
3500 3715 5.528870 CAGGGGACAAAATAACAGTTGAAC 58.471 41.667 0.00 0.00 0.00 3.18
3511 3726 0.542702 CTGTGGGCAGGGGACAAAAT 60.543 55.000 0.00 0.00 39.01 1.82
3552 3767 1.823610 AGTTTCCGGTCTAGTAGCACC 59.176 52.381 0.00 8.11 0.00 5.01
3672 3887 0.842635 GAATCACCTGCCTCCTGGAT 59.157 55.000 0.00 0.00 34.43 3.41
3809 4024 2.119029 GTAATCCAAGCCGGCCCAC 61.119 63.158 26.15 6.84 33.14 4.61
3813 4033 2.024414 AGAAATGTAATCCAAGCCGGC 58.976 47.619 21.89 21.89 33.14 6.13
3815 4035 4.396166 ACTCAAGAAATGTAATCCAAGCCG 59.604 41.667 0.00 0.00 0.00 5.52
3870 4090 1.076549 GGTGCCTGTCCCCATCAAA 59.923 57.895 0.00 0.00 0.00 2.69
3947 4167 2.851824 CGACAACAACAAAAGAACTGGC 59.148 45.455 0.00 0.00 0.00 4.85
3948 4168 3.127895 TCCGACAACAACAAAAGAACTGG 59.872 43.478 0.00 0.00 0.00 4.00
3950 4170 5.379732 TTTCCGACAACAACAAAAGAACT 57.620 34.783 0.00 0.00 0.00 3.01
3951 4171 6.455045 TTTTTCCGACAACAACAAAAGAAC 57.545 33.333 0.00 0.00 0.00 3.01
3952 4172 8.758633 TTATTTTTCCGACAACAACAAAAGAA 57.241 26.923 0.00 0.00 0.00 2.52
3954 4174 7.116819 GCTTATTTTTCCGACAACAACAAAAG 58.883 34.615 0.00 0.00 0.00 2.27
3972 4198 6.225318 ACACAAAATCACATGCTGCTTATTT 58.775 32.000 0.00 0.00 0.00 1.40
3973 4199 5.786311 ACACAAAATCACATGCTGCTTATT 58.214 33.333 0.00 0.00 0.00 1.40
3974 4200 5.395682 ACACAAAATCACATGCTGCTTAT 57.604 34.783 0.00 0.00 0.00 1.73
4025 4254 4.942761 AAAACTCTACTCGTGGGTGTAA 57.057 40.909 0.00 0.00 0.00 2.41
4048 4278 3.380954 TGCAAGCACAATTCAGAAACAGA 59.619 39.130 0.00 0.00 0.00 3.41
4049 4279 3.708890 TGCAAGCACAATTCAGAAACAG 58.291 40.909 0.00 0.00 0.00 3.16
4050 4280 3.797451 TGCAAGCACAATTCAGAAACA 57.203 38.095 0.00 0.00 0.00 2.83
4058 4288 3.006003 TCACATCACATGCAAGCACAATT 59.994 39.130 0.00 0.00 0.00 2.32
4063 4293 1.135228 GCATCACATCACATGCAAGCA 60.135 47.619 0.00 0.00 44.18 3.91
4089 4319 2.483877 ACAAGCACCGTCACAATGTATG 59.516 45.455 0.00 0.00 0.00 2.39
4101 4335 1.871080 AGAACTTCTGACAAGCACCG 58.129 50.000 0.00 0.00 0.00 4.94
4106 4340 7.496529 TTACAATGGAAGAACTTCTGACAAG 57.503 36.000 13.14 4.83 39.45 3.16
4108 4342 8.154203 TGTATTACAATGGAAGAACTTCTGACA 58.846 33.333 13.14 4.91 39.45 3.58
4123 4357 9.859427 AAATCATCCAAACTGTGTATTACAATG 57.141 29.630 0.00 0.00 39.20 2.82
4124 4358 9.859427 CAAATCATCCAAACTGTGTATTACAAT 57.141 29.630 0.00 0.00 39.20 2.71
4125 4359 8.303156 CCAAATCATCCAAACTGTGTATTACAA 58.697 33.333 0.00 0.00 39.20 2.41
4126 4360 7.450014 ACCAAATCATCCAAACTGTGTATTACA 59.550 33.333 0.00 0.00 37.78 2.41
4129 4363 6.916360 ACCAAATCATCCAAACTGTGTATT 57.084 33.333 0.00 0.00 0.00 1.89
4130 4364 6.493115 TCAACCAAATCATCCAAACTGTGTAT 59.507 34.615 0.00 0.00 0.00 2.29
4156 4474 7.412853 CAGAACTAAACACCAATATCATCAGC 58.587 38.462 0.00 0.00 0.00 4.26
4185 4507 7.604549 TCATTGCATTCAGTAACAAACATCAT 58.395 30.769 0.00 0.00 0.00 2.45
4190 4512 8.130307 ACTTTTCATTGCATTCAGTAACAAAC 57.870 30.769 0.00 0.00 0.00 2.93
4203 4525 2.632512 GGGGGAAGAACTTTTCATTGCA 59.367 45.455 0.00 0.00 0.00 4.08
4210 4532 2.091499 AGAAACCGGGGGAAGAACTTTT 60.091 45.455 6.32 0.00 0.00 2.27
4211 4533 1.497716 AGAAACCGGGGGAAGAACTTT 59.502 47.619 6.32 0.00 0.00 2.66
4237 5603 1.201921 CGCGTTCTAAGTCAACATGCC 60.202 52.381 0.00 0.00 0.00 4.40
4239 5605 2.987149 ACTCGCGTTCTAAGTCAACATG 59.013 45.455 5.77 0.00 0.00 3.21
4247 5613 2.060326 TTGACCACTCGCGTTCTAAG 57.940 50.000 5.77 0.00 0.00 2.18
4253 5619 2.660258 AAGCCTTTGACCACTCGCGT 62.660 55.000 5.77 0.00 0.00 6.01
4255 5621 0.884704 TCAAGCCTTTGACCACTCGC 60.885 55.000 0.00 0.00 38.37 5.03
4256 5622 1.593196 TTCAAGCCTTTGACCACTCG 58.407 50.000 0.00 0.00 42.79 4.18
4257 5623 2.952310 AGTTTCAAGCCTTTGACCACTC 59.048 45.455 0.00 0.00 42.79 3.51
4258 5624 3.018423 AGTTTCAAGCCTTTGACCACT 57.982 42.857 0.00 0.00 42.79 4.00
4259 5625 3.130340 TCAAGTTTCAAGCCTTTGACCAC 59.870 43.478 0.00 0.00 42.79 4.16
4260 5626 3.360867 TCAAGTTTCAAGCCTTTGACCA 58.639 40.909 0.00 0.00 42.79 4.02
4262 5628 4.743493 TGTTCAAGTTTCAAGCCTTTGAC 58.257 39.130 0.00 0.00 42.79 3.18
4263 5629 4.677779 GCTGTTCAAGTTTCAAGCCTTTGA 60.678 41.667 0.00 0.00 41.44 2.69
4264 5630 3.553105 GCTGTTCAAGTTTCAAGCCTTTG 59.447 43.478 0.00 0.00 35.57 2.77
4265 5631 3.448660 AGCTGTTCAAGTTTCAAGCCTTT 59.551 39.130 0.00 0.00 0.00 3.11
4267 5633 2.659428 AGCTGTTCAAGTTTCAAGCCT 58.341 42.857 0.00 0.00 0.00 4.58
4268 5634 4.216257 TGATAGCTGTTCAAGTTTCAAGCC 59.784 41.667 0.00 0.00 0.00 4.35
4269 5635 5.362556 TGATAGCTGTTCAAGTTTCAAGC 57.637 39.130 0.00 0.00 0.00 4.01
4270 5636 7.959651 GTGTATGATAGCTGTTCAAGTTTCAAG 59.040 37.037 0.00 0.00 0.00 3.02
4278 5644 8.257306 TCAGTTATGTGTATGATAGCTGTTCAA 58.743 33.333 0.00 0.00 36.51 2.69
4327 5693 6.809196 CCTAGCGAGAATGTATCATTTCCTAC 59.191 42.308 0.00 0.00 0.00 3.18
4330 5696 5.784177 TCCTAGCGAGAATGTATCATTTCC 58.216 41.667 0.00 0.00 0.00 3.13
4381 5779 2.295909 TCCGCCCATTGTTTTTCTTCAG 59.704 45.455 0.00 0.00 0.00 3.02
4382 5780 2.035321 GTCCGCCCATTGTTTTTCTTCA 59.965 45.455 0.00 0.00 0.00 3.02
4398 5796 0.940126 TCTCGAATACCTACGTCCGC 59.060 55.000 0.00 0.00 0.00 5.54
4400 5798 1.262683 CGGTCTCGAATACCTACGTCC 59.737 57.143 13.22 0.00 39.00 4.79
4403 5801 1.667724 ACACGGTCTCGAATACCTACG 59.332 52.381 13.22 4.70 40.11 3.51
4413 5811 4.235360 AGACTTCAATTAACACGGTCTCG 58.765 43.478 0.00 0.00 43.02 4.04
4444 5842 3.691575 TCAACAAGTCCAAAAGTGACCA 58.308 40.909 0.00 0.00 33.09 4.02
4447 5845 4.531854 TGGATCAACAAGTCCAAAAGTGA 58.468 39.130 0.00 0.00 41.36 3.41
4462 5882 5.716094 CTGAAACAAATCAGCATGGATCAA 58.284 37.500 0.00 0.00 40.31 2.57
4477 5897 9.734620 CTTGAGAACAAAATCATACTGAAACAA 57.265 29.630 0.00 0.00 35.49 2.83
4483 5903 7.137490 TCAGCTTGAGAACAAAATCATACTG 57.863 36.000 0.00 0.00 35.49 2.74
4499 5928 0.467384 GGCAGCCTCTATCAGCTTGA 59.533 55.000 3.29 0.00 37.18 3.02
4500 5929 0.879400 CGGCAGCCTCTATCAGCTTG 60.879 60.000 10.54 0.00 37.18 4.01
4509 5938 2.281761 CCAACAACGGCAGCCTCT 60.282 61.111 10.54 0.00 0.00 3.69
4519 5948 0.586802 GAACGAGGTGCTCCAACAAC 59.413 55.000 7.70 0.00 35.89 3.32
4521 5950 1.070786 GGAACGAGGTGCTCCAACA 59.929 57.895 7.70 0.00 35.89 3.33
4522 5951 3.967715 GGAACGAGGTGCTCCAAC 58.032 61.111 7.70 0.00 35.89 3.77
4536 5981 2.869646 CGCTTGAGCATTGCGGAA 59.130 55.556 2.38 0.00 45.07 4.30
4569 6014 2.510238 GACGCTGCCTGCACCTAG 60.510 66.667 0.00 0.00 43.06 3.02
4586 6053 1.860078 GTTCCTTCCTCACAACGCG 59.140 57.895 3.53 3.53 0.00 6.01
4591 6058 1.550524 CTGGATCGTTCCTTCCTCACA 59.449 52.381 13.55 0.00 43.07 3.58
4635 6102 2.787915 GACGCAGCTAGCTTTGGC 59.212 61.111 16.46 15.00 42.61 4.52
4675 6142 1.153289 ATGCCAGCCTTACTCGCAG 60.153 57.895 0.00 0.00 46.12 5.18
4799 6287 0.847670 TTTATGTTACGGCGCGATCG 59.152 50.000 12.10 15.98 39.07 3.69
4809 6297 4.259356 AGGCGGAGGAAGTTTTATGTTAC 58.741 43.478 0.00 0.00 0.00 2.50
4810 6298 4.563140 AGGCGGAGGAAGTTTTATGTTA 57.437 40.909 0.00 0.00 0.00 2.41
4811 6299 3.434940 AGGCGGAGGAAGTTTTATGTT 57.565 42.857 0.00 0.00 0.00 2.71
4812 6300 3.434940 AAGGCGGAGGAAGTTTTATGT 57.565 42.857 0.00 0.00 0.00 2.29
4814 6302 8.584063 TTAATAAAAGGCGGAGGAAGTTTTAT 57.416 30.769 0.00 0.00 35.70 1.40
4821 6312 6.844097 ACAAATTAATAAAAGGCGGAGGAA 57.156 33.333 0.00 0.00 0.00 3.36
4838 6655 5.050363 CGTGCCGAGCATATAGTAACAAATT 60.050 40.000 1.90 0.00 41.91 1.82
4847 6664 1.081442 TCGCGTGCCGAGCATATAG 60.081 57.895 5.77 0.00 41.91 1.31
4866 6683 4.702274 ATGGCCACCACCCTTGCC 62.702 66.667 8.16 0.00 44.27 4.52
4867 6684 3.070576 GATGGCCACCACCCTTGC 61.071 66.667 8.16 0.00 35.80 4.01
4868 6685 1.679977 CTGATGGCCACCACCCTTG 60.680 63.158 8.16 0.00 35.80 3.61
4869 6686 2.765969 CTGATGGCCACCACCCTT 59.234 61.111 8.16 0.00 35.80 3.95
4870 6687 3.341629 CCTGATGGCCACCACCCT 61.342 66.667 8.16 0.00 35.80 4.34
4989 6811 2.048127 AGTGAAAGTCGGAGCGGC 60.048 61.111 0.00 0.00 0.00 6.53
5018 6840 1.296867 GCATGTCGAAATGGACGCG 60.297 57.895 17.27 3.53 39.83 6.01
5038 6867 3.905968 AGGAAAACCCCGAAGAGAAAAA 58.094 40.909 0.00 0.00 34.66 1.94
5057 6886 1.542915 CTTTGACATGTGCTGGGAAGG 59.457 52.381 1.15 0.00 0.00 3.46
5065 6894 2.126346 GCGGCCTTTGACATGTGC 60.126 61.111 1.15 0.00 0.00 4.57
5085 6914 0.603975 GTGGAGCAGTGGACTTGACC 60.604 60.000 0.00 0.00 0.00 4.02
5135 6964 0.034059 CCTTCCAAGACGCTGTCACT 59.966 55.000 10.52 0.00 34.60 3.41
5215 7044 0.319900 GTCTGAGTCCAAGCTTGCGA 60.320 55.000 21.43 16.08 0.00 5.10
5216 7045 1.621301 CGTCTGAGTCCAAGCTTGCG 61.621 60.000 21.43 14.02 0.00 4.85
5217 7046 1.905922 GCGTCTGAGTCCAAGCTTGC 61.906 60.000 21.43 8.45 0.00 4.01
5218 7047 1.294659 GGCGTCTGAGTCCAAGCTTG 61.295 60.000 19.93 19.93 0.00 4.01
5220 7049 2.659610 GGCGTCTGAGTCCAAGCT 59.340 61.111 0.00 0.00 0.00 3.74
5222 7051 1.216710 GAGGGCGTCTGAGTCCAAG 59.783 63.158 0.00 0.00 38.64 3.61
5223 7052 2.636412 CGAGGGCGTCTGAGTCCAA 61.636 63.158 5.58 0.00 38.64 3.53
5224 7053 3.062466 CGAGGGCGTCTGAGTCCA 61.062 66.667 5.58 0.00 38.64 4.02
5225 7054 4.500116 GCGAGGGCGTCTGAGTCC 62.500 72.222 5.58 0.00 40.36 3.85
5226 7055 2.875684 GAAGCGAGGGCGTCTGAGTC 62.876 65.000 5.58 0.00 46.35 3.36
5227 7056 2.992114 AAGCGAGGGCGTCTGAGT 60.992 61.111 5.58 0.00 46.35 3.41
5231 7060 0.534203 TTTTTGAAGCGAGGGCGTCT 60.534 50.000 5.58 0.00 46.18 4.18
5233 7062 1.652563 GTTTTTGAAGCGAGGGCGT 59.347 52.632 0.00 0.00 46.35 5.68
5235 7064 0.673985 AAGGTTTTTGAAGCGAGGGC 59.326 50.000 0.00 0.00 40.37 5.19
5236 7065 3.068165 AGAAAAGGTTTTTGAAGCGAGGG 59.932 43.478 0.00 0.00 0.00 4.30
5237 7066 4.307443 AGAAAAGGTTTTTGAAGCGAGG 57.693 40.909 0.00 0.00 0.00 4.63
5238 7067 5.102313 ACAAGAAAAGGTTTTTGAAGCGAG 58.898 37.500 0.00 0.00 33.95 5.03
5241 7070 8.251750 ACTAAACAAGAAAAGGTTTTTGAAGC 57.748 30.769 0.00 0.00 38.17 3.86
5243 7072 9.210329 GGAACTAAACAAGAAAAGGTTTTTGAA 57.790 29.630 0.00 0.00 38.17 2.69
5244 7073 8.368668 TGGAACTAAACAAGAAAAGGTTTTTGA 58.631 29.630 0.00 0.00 38.17 2.69
5247 7076 9.562408 TTTTGGAACTAAACAAGAAAAGGTTTT 57.438 25.926 0.00 0.00 38.17 2.43
5248 7077 9.562408 TTTTTGGAACTAAACAAGAAAAGGTTT 57.438 25.926 0.00 0.00 40.15 3.27
5249 7078 9.214957 CTTTTTGGAACTAAACAAGAAAAGGTT 57.785 29.630 0.00 0.00 0.00 3.50
5250 7079 8.590204 TCTTTTTGGAACTAAACAAGAAAAGGT 58.410 29.630 0.00 0.00 30.82 3.50
5252 7081 9.639601 ACTCTTTTTGGAACTAAACAAGAAAAG 57.360 29.630 0.00 0.00 30.97 2.27
5253 7082 9.418045 CACTCTTTTTGGAACTAAACAAGAAAA 57.582 29.630 0.00 0.00 0.00 2.29
5254 7083 8.798402 TCACTCTTTTTGGAACTAAACAAGAAA 58.202 29.630 0.00 0.00 0.00 2.52
5255 7084 8.343168 TCACTCTTTTTGGAACTAAACAAGAA 57.657 30.769 0.00 0.00 0.00 2.52
5256 7085 7.415206 GCTCACTCTTTTTGGAACTAAACAAGA 60.415 37.037 0.00 0.00 0.00 3.02
5257 7086 6.693113 GCTCACTCTTTTTGGAACTAAACAAG 59.307 38.462 0.00 0.00 0.00 3.16
5258 7087 6.405397 GGCTCACTCTTTTTGGAACTAAACAA 60.405 38.462 0.00 0.00 0.00 2.83
5271 7100 4.133078 CTGACTTTGAGGCTCACTCTTTT 58.867 43.478 18.55 0.00 46.72 2.27
5272 7101 3.495806 CCTGACTTTGAGGCTCACTCTTT 60.496 47.826 18.55 0.00 46.72 2.52
5280 7109 2.134630 CTGGCCCTGACTTTGAGGCT 62.135 60.000 0.00 0.00 45.07 4.58
5284 7113 1.072331 GAAGTCTGGCCCTGACTTTGA 59.928 52.381 29.58 0.00 46.95 2.69
5296 7125 5.289675 CAGCACTTACTAATTCGAAGTCTGG 59.710 44.000 0.00 0.00 31.04 3.86
5304 7133 5.220340 CGTTTACCCAGCACTTACTAATTCG 60.220 44.000 0.00 0.00 0.00 3.34
5313 7142 0.763035 ACCTCGTTTACCCAGCACTT 59.237 50.000 0.00 0.00 0.00 3.16
5361 7196 1.833787 TTGCTAGTGACGGAACCCCC 61.834 60.000 0.00 0.00 0.00 5.40
5394 7229 1.611936 GGAGAAGCAGGTTCCAAGACC 60.612 57.143 8.80 2.34 40.11 3.85
5399 7234 2.592993 CGGGGAGAAGCAGGTTCCA 61.593 63.158 8.80 0.00 35.51 3.53
5406 7241 3.319198 GGGACACGGGGAGAAGCA 61.319 66.667 0.00 0.00 0.00 3.91
5472 7307 0.813184 GATCGTCGGTGGTTCTGGTA 59.187 55.000 0.00 0.00 0.00 3.25
5476 7311 1.654954 CCTCGATCGTCGGTGGTTCT 61.655 60.000 15.94 0.00 40.88 3.01
5500 7338 1.851304 TGAATTGGATGGAAGCCCAC 58.149 50.000 0.00 0.00 46.54 4.61
5501 7339 2.852714 ATGAATTGGATGGAAGCCCA 57.147 45.000 0.00 0.00 46.54 5.36
5557 7398 9.278978 TGTTTTGCTATTATCTGTGTTGAGTTA 57.721 29.630 0.00 0.00 0.00 2.24
5558 7399 8.165239 TGTTTTGCTATTATCTGTGTTGAGTT 57.835 30.769 0.00 0.00 0.00 3.01
5559 7400 7.661437 TCTGTTTTGCTATTATCTGTGTTGAGT 59.339 33.333 0.00 0.00 0.00 3.41
5560 7401 7.959651 GTCTGTTTTGCTATTATCTGTGTTGAG 59.040 37.037 0.00 0.00 0.00 3.02
5561 7402 7.443879 TGTCTGTTTTGCTATTATCTGTGTTGA 59.556 33.333 0.00 0.00 0.00 3.18
5562 7403 7.584108 TGTCTGTTTTGCTATTATCTGTGTTG 58.416 34.615 0.00 0.00 0.00 3.33
5563 7404 7.744087 TGTCTGTTTTGCTATTATCTGTGTT 57.256 32.000 0.00 0.00 0.00 3.32
5564 7405 7.607607 TCATGTCTGTTTTGCTATTATCTGTGT 59.392 33.333 0.00 0.00 0.00 3.72
5565 7406 7.977904 TCATGTCTGTTTTGCTATTATCTGTG 58.022 34.615 0.00 0.00 0.00 3.66
5566 7407 8.043113 TCTCATGTCTGTTTTGCTATTATCTGT 58.957 33.333 0.00 0.00 0.00 3.41
5567 7408 8.429493 TCTCATGTCTGTTTTGCTATTATCTG 57.571 34.615 0.00 0.00 0.00 2.90
5568 7409 7.226325 GCTCTCATGTCTGTTTTGCTATTATCT 59.774 37.037 0.00 0.00 0.00 1.98
5569 7410 7.226325 AGCTCTCATGTCTGTTTTGCTATTATC 59.774 37.037 0.00 0.00 0.00 1.75
5570 7411 7.052873 AGCTCTCATGTCTGTTTTGCTATTAT 58.947 34.615 0.00 0.00 0.00 1.28
5571 7412 6.409704 AGCTCTCATGTCTGTTTTGCTATTA 58.590 36.000 0.00 0.00 0.00 0.98
5572 7413 5.251764 AGCTCTCATGTCTGTTTTGCTATT 58.748 37.500 0.00 0.00 0.00 1.73
5573 7414 4.841422 AGCTCTCATGTCTGTTTTGCTAT 58.159 39.130 0.00 0.00 0.00 2.97
5574 7415 4.277515 AGCTCTCATGTCTGTTTTGCTA 57.722 40.909 0.00 0.00 0.00 3.49
5575 7416 3.137446 AGCTCTCATGTCTGTTTTGCT 57.863 42.857 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.