Multiple sequence alignment - TraesCS5A01G249900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G249900 chr5A 100.000 6943 0 0 1 6943 464632663 464639605 0.000000e+00 12822.0
1 TraesCS5A01G249900 chr5B 92.074 6523 299 73 1 6406 429818518 429824939 0.000000e+00 8981.0
2 TraesCS5A01G249900 chr5B 92.457 2108 77 33 413 2476 429725879 429727948 0.000000e+00 2937.0
3 TraesCS5A01G249900 chr5B 90.654 1423 90 19 5017 6406 429887370 429888782 0.000000e+00 1851.0
4 TraesCS5A01G249900 chr5B 86.890 1579 105 45 3356 4918 429885877 429887369 0.000000e+00 1676.0
5 TraesCS5A01G249900 chr5B 89.390 1197 83 25 3769 4954 429729338 429730501 0.000000e+00 1467.0
6 TraesCS5A01G249900 chr5B 94.000 850 51 0 5221 6070 429730494 429731343 0.000000e+00 1288.0
7 TraesCS5A01G249900 chr5B 82.388 1499 153 50 422 1865 429881712 429883154 0.000000e+00 1203.0
8 TraesCS5A01G249900 chr5B 97.041 507 15 0 1896 2402 429883151 429883657 0.000000e+00 854.0
9 TraesCS5A01G249900 chr5B 87.695 577 54 5 5 564 429725262 429725838 0.000000e+00 656.0
10 TraesCS5A01G249900 chr5B 86.494 348 36 8 2444 2786 429884026 429884367 8.500000e-99 372.0
11 TraesCS5A01G249900 chr5B 84.887 311 38 7 6102 6406 429731340 429731647 8.750000e-79 305.0
12 TraesCS5A01G249900 chr5B 82.836 268 35 11 4955 5214 697376683 697376419 5.420000e-56 230.0
13 TraesCS5A01G249900 chr5B 83.761 234 25 7 4955 5176 684012095 684012327 7.060000e-50 209.0
14 TraesCS5A01G249900 chr5B 96.774 31 1 0 387 417 429725837 429725867 1.300000e-02 52.8
15 TraesCS5A01G249900 chr5D 91.615 2600 165 34 1642 4216 363975751 363978322 0.000000e+00 3544.0
16 TraesCS5A01G249900 chr5D 92.906 1607 62 15 2 1570 363974155 363975747 0.000000e+00 2289.0
17 TraesCS5A01G249900 chr5D 91.478 1631 57 32 1 1570 363338102 363339711 0.000000e+00 2167.0
18 TraesCS5A01G249900 chr5D 94.675 1108 28 12 1642 2731 363339715 363340809 0.000000e+00 1690.0
19 TraesCS5A01G249900 chr5D 94.786 1074 32 12 1639 2702 363177465 363178524 0.000000e+00 1652.0
20 TraesCS5A01G249900 chr5D 91.268 1191 96 8 5221 6406 363343195 363344382 0.000000e+00 1616.0
21 TraesCS5A01G249900 chr5D 91.792 1133 87 5 5221 6349 363181098 363182228 0.000000e+00 1572.0
22 TraesCS5A01G249900 chr5D 89.933 1202 78 22 3767 4957 363179940 363181109 0.000000e+00 1509.0
23 TraesCS5A01G249900 chr5D 90.795 1119 81 10 5225 6339 363979491 363980591 0.000000e+00 1476.0
24 TraesCS5A01G249900 chr5D 89.185 1202 82 23 3767 4957 363342042 363343206 0.000000e+00 1456.0
25 TraesCS5A01G249900 chr5D 91.931 979 37 18 623 1579 363176408 363177366 0.000000e+00 1332.0
26 TraesCS5A01G249900 chr5D 84.370 691 75 19 4267 4932 363978766 363979448 0.000000e+00 647.0
27 TraesCS5A01G249900 chr5D 84.437 604 63 12 5 584 363175806 363176402 3.630000e-157 566.0
28 TraesCS5A01G249900 chr5D 90.086 232 16 6 3556 3782 363179693 363179922 1.890000e-75 294.0
29 TraesCS5A01G249900 chr5D 89.912 228 19 4 3556 3782 363341800 363342024 2.450000e-74 291.0
30 TraesCS5A01G249900 chr5D 86.000 150 21 0 3109 3258 228960950 228960801 2.000000e-35 161.0
31 TraesCS5A01G249900 chr5D 86.364 110 8 5 3416 3523 363179602 363179706 5.690000e-21 113.0
32 TraesCS5A01G249900 chr5D 100.000 31 0 0 1608 1638 363177365 363177395 2.700000e-04 58.4
33 TraesCS5A01G249900 chr6B 82.700 474 80 2 1913 2385 179464122 179464594 2.990000e-113 420.0
34 TraesCS5A01G249900 chr3B 86.742 264 27 8 4956 5214 700376358 700376618 3.170000e-73 287.0
35 TraesCS5A01G249900 chr1D 86.347 271 25 5 4955 5214 463548818 463548549 1.140000e-72 285.0
36 TraesCS5A01G249900 chr6A 83.154 279 27 13 4953 5214 84701840 84701565 3.240000e-58 237.0
37 TraesCS5A01G249900 chr3A 81.343 268 36 14 4956 5214 663588808 663589070 9.130000e-49 206.0
38 TraesCS5A01G249900 chr3A 92.308 52 2 1 2995 3044 94194106 94194157 9.660000e-09 73.1
39 TraesCS5A01G249900 chr3A 84.746 59 8 1 5 62 56852777 56852719 2.700000e-04 58.4
40 TraesCS5A01G249900 chrUn 80.351 285 30 12 4954 5214 42261944 42262226 7.110000e-45 193.0
41 TraesCS5A01G249900 chr2D 81.323 257 30 9 4957 5211 114543113 114543353 7.110000e-45 193.0
42 TraesCS5A01G249900 chr4D 81.590 239 30 5 4955 5179 418521733 418521971 1.190000e-42 185.0
43 TraesCS5A01G249900 chr4D 90.476 63 4 2 5153 5214 499845440 499845379 1.610000e-11 82.4
44 TraesCS5A01G249900 chr4B 79.720 286 29 16 4955 5214 662612553 662612835 5.530000e-41 180.0
45 TraesCS5A01G249900 chr4B 90.541 74 6 1 3854 3927 644707689 644707761 5.730000e-16 97.1
46 TraesCS5A01G249900 chr6D 88.462 52 4 2 12 62 11410156 11410206 2.090000e-05 62.1
47 TraesCS5A01G249900 chr4A 86.441 59 4 1 12 66 152758420 152758362 2.090000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G249900 chr5A 464632663 464639605 6942 False 12822.000000 12822 100.000000 1 6943 1 chr5A.!!$F1 6942
1 TraesCS5A01G249900 chr5B 429818518 429824939 6421 False 8981.000000 8981 92.074000 1 6406 1 chr5B.!!$F1 6405
2 TraesCS5A01G249900 chr5B 429881712 429888782 7070 False 1191.200000 1851 88.693400 422 6406 5 chr5B.!!$F4 5984
3 TraesCS5A01G249900 chr5B 429725262 429731647 6385 False 1117.633333 2937 90.867167 5 6406 6 chr5B.!!$F3 6401
4 TraesCS5A01G249900 chr5D 363974155 363980591 6436 False 1989.000000 3544 89.921500 2 6339 4 chr5D.!!$F3 6337
5 TraesCS5A01G249900 chr5D 363338102 363344382 6280 False 1444.000000 2167 91.303600 1 6406 5 chr5D.!!$F2 6405
6 TraesCS5A01G249900 chr5D 363175806 363182228 6422 False 887.050000 1652 91.166125 5 6349 8 chr5D.!!$F1 6344

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
843 1117 0.037303 CCTGCACTCAACCACCTCAT 59.963 55.000 0.00 0.00 0.00 2.90 F
894 1168 0.550914 TCAGCCCATACCACCATTCC 59.449 55.000 0.00 0.00 0.00 3.01 F
938 1224 0.678684 GAAACCCATACCACCACCCG 60.679 60.000 0.00 0.00 0.00 5.28 F
1809 2206 1.017387 GGTAAGCCTAGTGCATGCAC 58.983 55.000 37.87 37.87 46.50 4.57 F
3174 4800 1.336755 GCCGTGTGTCACTGGAATTTT 59.663 47.619 16.21 0.00 32.71 1.82 F
4598 8418 1.093159 GCTTCCTGATGCAGTCCTTG 58.907 55.000 0.00 0.00 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1681 2064 1.968017 TACCACGGAAGCTCGTCGT 60.968 57.895 3.88 3.88 41.86 4.34 R
2040 2440 2.441164 ATCTCCCGCAGCGTCTCT 60.441 61.111 15.05 0.00 0.00 3.10 R
2951 4569 7.695055 TCTGTTGAGTAATTAATGGAAAGGGA 58.305 34.615 0.00 0.00 0.00 4.20 R
3230 4857 0.466543 TAAGTGCCACACGTCAGGTT 59.533 50.000 0.00 0.00 39.64 3.50 R
5119 9000 1.095600 GGTCAAAGGGCCGAAATCTC 58.904 55.000 0.00 0.00 0.00 2.75 R
6479 10385 0.035056 CTTTGGATCCTCGCCCTTGT 60.035 55.000 14.23 0.00 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 0.540365 AACCCTAACCTCGTCGTCCA 60.540 55.000 0.00 0.00 0.00 4.02
102 103 2.670019 TCCCGAGGGATAGATTCGAA 57.330 50.000 6.80 0.00 39.76 3.71
126 127 2.446282 GATCGAAGCTGAGAAGACGAC 58.554 52.381 0.00 0.00 32.93 4.34
194 208 3.015675 ACTACTAGCTAAAGCCGAGGT 57.984 47.619 0.00 0.00 43.38 3.85
211 225 1.375523 GTACCAGTGTTGCCCTCCG 60.376 63.158 0.00 0.00 0.00 4.63
267 281 0.109919 GGAATTCACGTTTGGTCGGC 60.110 55.000 7.93 0.00 34.94 5.54
269 283 1.847890 AATTCACGTTTGGTCGGCGG 61.848 55.000 7.21 0.00 34.94 6.13
332 346 3.508762 GCATTGGCAAAGTCATCAAGAG 58.491 45.455 3.01 0.00 40.72 2.85
366 380 2.818841 GGTTTGTGGTGTTGCCCC 59.181 61.111 0.00 0.00 36.04 5.80
471 501 8.804688 TGTTGGTACGAAATTTCTTTAAATGG 57.195 30.769 15.92 0.79 35.46 3.16
484 515 3.608316 TTAAATGGGCATTTCCAGTGC 57.392 42.857 0.00 0.00 40.99 4.40
495 526 1.412453 TTCCAGTGCACCGTAACCCT 61.412 55.000 14.63 0.00 0.00 4.34
594 814 2.032681 AGAACCACTGCTTCGGCC 59.967 61.111 0.00 0.00 40.91 6.13
711 944 2.355363 TGCCACACGCACGTACTC 60.355 61.111 0.00 0.00 44.64 2.59
712 945 2.049433 GCCACACGCACGTACTCT 60.049 61.111 0.00 0.00 37.47 3.24
713 946 1.210931 GCCACACGCACGTACTCTA 59.789 57.895 0.00 0.00 37.47 2.43
714 947 1.069378 GCCACACGCACGTACTCTAC 61.069 60.000 0.00 0.00 37.47 2.59
773 1015 2.370445 CCCTCTTGACCCGCTCCAT 61.370 63.158 0.00 0.00 0.00 3.41
842 1116 1.053835 TCCTGCACTCAACCACCTCA 61.054 55.000 0.00 0.00 0.00 3.86
843 1117 0.037303 CCTGCACTCAACCACCTCAT 59.963 55.000 0.00 0.00 0.00 2.90
894 1168 0.550914 TCAGCCCATACCACCATTCC 59.449 55.000 0.00 0.00 0.00 3.01
938 1224 0.678684 GAAACCCATACCACCACCCG 60.679 60.000 0.00 0.00 0.00 5.28
941 1227 4.499633 CCATACCACCACCCGGCC 62.500 72.222 0.00 0.00 34.57 6.13
942 1228 3.722813 CATACCACCACCCGGCCA 61.723 66.667 2.24 0.00 34.57 5.36
943 1229 3.407967 ATACCACCACCCGGCCAG 61.408 66.667 2.24 0.00 34.57 4.85
1311 1597 2.048597 TCGTTGCGCCGAGTTGAT 60.049 55.556 4.18 0.00 32.18 2.57
1809 2206 1.017387 GGTAAGCCTAGTGCATGCAC 58.983 55.000 37.87 37.87 46.50 4.57
1884 2281 5.890110 ACGAACGCACTCTATCAATTATG 57.110 39.130 0.00 0.00 0.00 1.90
1954 2354 2.643272 ACGTGCTGATGACGACGT 59.357 55.556 0.00 0.00 39.21 4.34
2898 4515 2.222027 GCAGTAATTATGCGCTCCCTT 58.778 47.619 9.73 0.00 33.31 3.95
2900 4517 3.466836 CAGTAATTATGCGCTCCCTTCA 58.533 45.455 9.73 0.00 0.00 3.02
2901 4518 3.496130 CAGTAATTATGCGCTCCCTTCAG 59.504 47.826 9.73 0.00 0.00 3.02
2909 4526 1.877443 GCGCTCCCTTCAGTAACAAAA 59.123 47.619 0.00 0.00 0.00 2.44
3124 4746 4.678287 CAGTTAGCAAGCATGACAACTTTG 59.322 41.667 0.00 0.00 0.00 2.77
3174 4800 1.336755 GCCGTGTGTCACTGGAATTTT 59.663 47.619 16.21 0.00 32.71 1.82
3175 4801 2.223711 GCCGTGTGTCACTGGAATTTTT 60.224 45.455 16.21 0.00 32.71 1.94
3212 4839 6.262601 ACTGAAATTGTCATCGAAAAACGTT 58.737 32.000 0.00 0.00 35.07 3.99
3218 4845 4.370049 TGTCATCGAAAAACGTTAGGACA 58.630 39.130 10.48 10.48 43.13 4.02
3255 4882 4.180817 CTGACGTGTGGCACTTATCATTA 58.819 43.478 19.83 0.00 31.34 1.90
3647 6697 1.135603 GCGAAGATGTGCTTGCATTCA 60.136 47.619 0.00 0.00 36.83 2.57
3774 6835 3.238108 AGCAAGTCTCCTGATACAACG 57.762 47.619 0.00 0.00 0.00 4.10
4028 7428 4.040755 ACTTGCTGGACCTGGATTACTAT 58.959 43.478 0.00 0.00 0.00 2.12
4038 7438 7.147724 TGGACCTGGATTACTATAGTCAAAGTG 60.148 40.741 9.12 0.00 0.00 3.16
4292 8104 3.560636 AGTATTCCTAACCATGCGCTT 57.439 42.857 9.73 0.00 0.00 4.68
4395 8207 2.496470 GTCTCCTACAAATCCTCCGTGT 59.504 50.000 0.00 0.00 0.00 4.49
4454 8266 3.391382 ACTGTGAGTAGCCCGGCC 61.391 66.667 5.55 0.00 0.00 6.13
4455 8267 4.514577 CTGTGAGTAGCCCGGCCG 62.515 72.222 21.04 21.04 0.00 6.13
4543 8363 1.741145 GTTTGTCGTGTGGTTTCAGGT 59.259 47.619 0.00 0.00 0.00 4.00
4598 8418 1.093159 GCTTCCTGATGCAGTCCTTG 58.907 55.000 0.00 0.00 0.00 3.61
4849 8686 1.473257 GGCTCCATGCTCATGTTCGTA 60.473 52.381 8.81 0.00 42.39 3.43
4954 8812 2.609916 TCTCATCTCACGTCTCACGATC 59.390 50.000 2.48 0.00 46.05 3.69
5006 8864 7.992180 ATGAAATCCGCTGAATTTCATTAAC 57.008 32.000 17.85 0.00 46.65 2.01
5034 8893 7.435068 AGCAGACACTGAAATATTTACGTTT 57.565 32.000 0.00 0.00 32.44 3.60
5151 9032 4.799255 GCCCTTTGACCGAAATGAAAACAT 60.799 41.667 0.00 0.00 0.00 2.71
5154 9035 7.096551 CCCTTTGACCGAAATGAAAACATAAT 58.903 34.615 0.00 0.00 0.00 1.28
5203 9084 8.069574 GGTTGGTGCTGAAATTTTTCTAAAATG 58.930 33.333 4.80 0.00 38.02 2.32
5256 9137 6.056884 TGATCTGATGTGCTTTATGTATGCA 58.943 36.000 0.00 0.00 34.82 3.96
5450 9331 0.671472 CGCTGGTGCTCTTCATGACA 60.671 55.000 0.00 0.00 36.97 3.58
5695 9576 0.634465 ACCTTCCCAAACAACCAGGT 59.366 50.000 0.00 0.00 0.00 4.00
5970 9854 6.425504 CGGAGAGATCAGCACAATTATTTTC 58.574 40.000 0.00 0.00 0.00 2.29
6037 9935 3.006003 TGTGCAGTGTATGTAAAGTCCGA 59.994 43.478 0.00 0.00 0.00 4.55
6243 10147 6.567602 AGTTCCTATTAAGGCATCAGTCTT 57.432 37.500 0.00 0.00 43.31 3.01
6249 10153 6.703607 CCTATTAAGGCATCAGTCTTAGTGTG 59.296 42.308 0.00 0.00 42.44 3.82
6256 10160 5.114780 GCATCAGTCTTAGTGTGACATGAT 58.885 41.667 0.00 0.00 36.94 2.45
6305 10209 3.693085 AGAGACGTCTACCGAGCAAAATA 59.307 43.478 20.09 0.00 40.70 1.40
6316 10220 9.485206 TCTACCGAGCAAAATATAAACCTTATC 57.515 33.333 0.00 0.00 0.00 1.75
6322 10226 9.937175 GAGCAAAATATAAACCTTATCACAGAC 57.063 33.333 0.00 0.00 0.00 3.51
6324 10228 8.682710 GCAAAATATAAACCTTATCACAGACCA 58.317 33.333 0.00 0.00 0.00 4.02
6332 10236 1.919240 TATCACAGACCACCACGACT 58.081 50.000 0.00 0.00 0.00 4.18
6406 10312 5.607119 AAACGACAACAACATATCTCCAC 57.393 39.130 0.00 0.00 0.00 4.02
6407 10313 3.250744 ACGACAACAACATATCTCCACG 58.749 45.455 0.00 0.00 0.00 4.94
6408 10314 3.057104 ACGACAACAACATATCTCCACGA 60.057 43.478 0.00 0.00 0.00 4.35
6409 10315 4.112634 CGACAACAACATATCTCCACGAT 58.887 43.478 0.00 0.00 36.11 3.73
6410 10316 4.207224 CGACAACAACATATCTCCACGATC 59.793 45.833 0.00 0.00 33.48 3.69
6411 10317 5.344743 ACAACAACATATCTCCACGATCT 57.655 39.130 0.00 0.00 33.48 2.75
6412 10318 5.734720 ACAACAACATATCTCCACGATCTT 58.265 37.500 0.00 0.00 33.48 2.40
6413 10319 6.173339 ACAACAACATATCTCCACGATCTTT 58.827 36.000 0.00 0.00 33.48 2.52
6414 10320 6.655003 ACAACAACATATCTCCACGATCTTTT 59.345 34.615 0.00 0.00 33.48 2.27
6415 10321 7.174946 ACAACAACATATCTCCACGATCTTTTT 59.825 33.333 0.00 0.00 33.48 1.94
6437 10343 3.817709 TTTTTGAAGAACCAGCCAAGG 57.182 42.857 0.00 0.00 0.00 3.61
6438 10344 1.039856 TTTGAAGAACCAGCCAAGGC 58.960 50.000 2.02 2.02 42.33 4.35
6452 10358 4.924305 GCCAAGGCTGATATTTCATTGA 57.076 40.909 3.29 0.00 38.26 2.57
6453 10359 5.266733 GCCAAGGCTGATATTTCATTGAA 57.733 39.130 3.29 0.00 38.26 2.69
6454 10360 5.850614 GCCAAGGCTGATATTTCATTGAAT 58.149 37.500 3.29 0.00 38.26 2.57
6455 10361 6.285990 GCCAAGGCTGATATTTCATTGAATT 58.714 36.000 3.29 0.00 38.26 2.17
6456 10362 7.436118 GCCAAGGCTGATATTTCATTGAATTA 58.564 34.615 3.29 1.91 38.26 1.40
6457 10363 7.927629 GCCAAGGCTGATATTTCATTGAATTAA 59.072 33.333 3.29 0.00 38.26 1.40
6458 10364 9.472361 CCAAGGCTGATATTTCATTGAATTAAG 57.528 33.333 0.00 0.00 0.00 1.85
6459 10365 8.975439 CAAGGCTGATATTTCATTGAATTAAGC 58.025 33.333 0.00 7.85 0.00 3.09
6460 10366 8.241497 AGGCTGATATTTCATTGAATTAAGCA 57.759 30.769 17.94 12.54 0.00 3.91
6461 10367 8.358148 AGGCTGATATTTCATTGAATTAAGCAG 58.642 33.333 17.94 18.20 0.00 4.24
6462 10368 8.355169 GGCTGATATTTCATTGAATTAAGCAGA 58.645 33.333 22.46 3.53 0.00 4.26
6463 10369 9.395707 GCTGATATTTCATTGAATTAAGCAGAG 57.604 33.333 22.46 10.96 0.00 3.35
6466 10372 9.609950 GATATTTCATTGAATTAAGCAGAGAGC 57.390 33.333 0.00 0.00 46.19 4.09
6478 10384 3.213249 GCAGAGAGCAGTGGAAAAATG 57.787 47.619 0.00 0.00 44.79 2.32
6479 10385 2.816087 GCAGAGAGCAGTGGAAAAATGA 59.184 45.455 0.00 0.00 44.79 2.57
6480 10386 3.365767 GCAGAGAGCAGTGGAAAAATGAC 60.366 47.826 0.00 0.00 44.79 3.06
6481 10387 3.817084 CAGAGAGCAGTGGAAAAATGACA 59.183 43.478 0.00 0.00 0.00 3.58
6482 10388 4.276678 CAGAGAGCAGTGGAAAAATGACAA 59.723 41.667 0.00 0.00 0.00 3.18
6483 10389 4.518211 AGAGAGCAGTGGAAAAATGACAAG 59.482 41.667 0.00 0.00 0.00 3.16
6484 10390 3.571401 AGAGCAGTGGAAAAATGACAAGG 59.429 43.478 0.00 0.00 0.00 3.61
6485 10391 2.629617 AGCAGTGGAAAAATGACAAGGG 59.370 45.455 0.00 0.00 0.00 3.95
6486 10392 2.867647 GCAGTGGAAAAATGACAAGGGC 60.868 50.000 0.00 0.00 0.00 5.19
6487 10393 1.613437 AGTGGAAAAATGACAAGGGCG 59.387 47.619 0.00 0.00 0.00 6.13
6488 10394 1.611491 GTGGAAAAATGACAAGGGCGA 59.389 47.619 0.00 0.00 0.00 5.54
6489 10395 1.885887 TGGAAAAATGACAAGGGCGAG 59.114 47.619 0.00 0.00 0.00 5.03
6490 10396 1.202348 GGAAAAATGACAAGGGCGAGG 59.798 52.381 0.00 0.00 0.00 4.63
6491 10397 2.159382 GAAAAATGACAAGGGCGAGGA 58.841 47.619 0.00 0.00 0.00 3.71
6492 10398 2.514458 AAAATGACAAGGGCGAGGAT 57.486 45.000 0.00 0.00 0.00 3.24
6493 10399 2.044123 AAATGACAAGGGCGAGGATC 57.956 50.000 0.00 0.00 0.00 3.36
6494 10400 0.181350 AATGACAAGGGCGAGGATCC 59.819 55.000 2.48 2.48 0.00 3.36
6495 10401 0.982852 ATGACAAGGGCGAGGATCCA 60.983 55.000 15.82 0.00 0.00 3.41
6496 10402 1.198094 TGACAAGGGCGAGGATCCAA 61.198 55.000 15.82 0.00 0.00 3.53
6497 10403 0.035439 GACAAGGGCGAGGATCCAAA 60.035 55.000 15.82 0.00 0.00 3.28
6498 10404 0.035056 ACAAGGGCGAGGATCCAAAG 60.035 55.000 15.82 5.62 0.00 2.77
6499 10405 0.253044 CAAGGGCGAGGATCCAAAGA 59.747 55.000 15.82 0.00 0.00 2.52
6500 10406 1.133976 CAAGGGCGAGGATCCAAAGAT 60.134 52.381 15.82 0.00 34.57 2.40
6517 10423 9.705103 ATCCAAAGATCAAGGATAAATTGAAGA 57.295 29.630 10.74 0.00 40.26 2.87
6518 10424 9.705103 TCCAAAGATCAAGGATAAATTGAAGAT 57.295 29.630 0.00 0.00 39.92 2.40
6519 10425 9.745880 CCAAAGATCAAGGATAAATTGAAGATG 57.254 33.333 0.00 0.00 39.92 2.90
6534 10440 8.524870 AATTGAAGATGAATGAAGAAAAACGG 57.475 30.769 0.00 0.00 0.00 4.44
6535 10441 6.875948 TGAAGATGAATGAAGAAAAACGGA 57.124 33.333 0.00 0.00 0.00 4.69
6536 10442 6.902341 TGAAGATGAATGAAGAAAAACGGAG 58.098 36.000 0.00 0.00 0.00 4.63
6538 10444 6.246420 AGATGAATGAAGAAAAACGGAGTG 57.754 37.500 0.00 0.00 45.00 3.51
6539 10445 4.223320 TGAATGAAGAAAAACGGAGTGC 57.777 40.909 0.00 0.00 45.00 4.40
6540 10446 3.004315 TGAATGAAGAAAAACGGAGTGCC 59.996 43.478 0.00 0.00 45.00 5.01
6541 10447 2.045561 TGAAGAAAAACGGAGTGCCA 57.954 45.000 0.00 0.00 45.00 4.92
6542 10448 2.370349 TGAAGAAAAACGGAGTGCCAA 58.630 42.857 0.00 0.00 45.00 4.52
6543 10449 2.755655 TGAAGAAAAACGGAGTGCCAAA 59.244 40.909 0.00 0.00 45.00 3.28
6544 10450 3.181491 TGAAGAAAAACGGAGTGCCAAAG 60.181 43.478 0.00 0.00 45.00 2.77
6545 10451 1.681264 AGAAAAACGGAGTGCCAAAGG 59.319 47.619 0.00 0.00 45.00 3.11
6562 10468 4.532490 GCACATGCCGTTAGCCTA 57.468 55.556 0.00 0.00 42.71 3.93
6563 10469 3.006672 GCACATGCCGTTAGCCTAT 57.993 52.632 0.00 0.00 42.71 2.57
6564 10470 0.868406 GCACATGCCGTTAGCCTATC 59.132 55.000 0.00 0.00 42.71 2.08
6565 10471 1.512926 CACATGCCGTTAGCCTATCC 58.487 55.000 0.00 0.00 42.71 2.59
6566 10472 1.070758 CACATGCCGTTAGCCTATCCT 59.929 52.381 0.00 0.00 42.71 3.24
6567 10473 1.344763 ACATGCCGTTAGCCTATCCTC 59.655 52.381 0.00 0.00 42.71 3.71
6568 10474 1.344438 CATGCCGTTAGCCTATCCTCA 59.656 52.381 0.00 0.00 42.71 3.86
6569 10475 1.717032 TGCCGTTAGCCTATCCTCAT 58.283 50.000 0.00 0.00 42.71 2.90
6570 10476 1.344438 TGCCGTTAGCCTATCCTCATG 59.656 52.381 0.00 0.00 42.71 3.07
6571 10477 1.338200 GCCGTTAGCCTATCCTCATGG 60.338 57.143 0.00 0.00 34.35 3.66
6572 10478 1.338200 CCGTTAGCCTATCCTCATGGC 60.338 57.143 0.00 0.00 46.42 4.40
6575 10481 2.348998 GCCTATCCTCATGGCGGG 59.651 66.667 0.00 0.00 37.11 6.13
6576 10482 2.520536 GCCTATCCTCATGGCGGGT 61.521 63.158 0.00 0.00 37.11 5.28
6577 10483 1.674057 CCTATCCTCATGGCGGGTC 59.326 63.158 0.00 0.00 0.00 4.46
6578 10484 1.674057 CTATCCTCATGGCGGGTCC 59.326 63.158 0.00 0.00 0.00 4.46
6579 10485 1.831652 CTATCCTCATGGCGGGTCCC 61.832 65.000 0.00 0.00 0.00 4.46
6600 10506 3.127425 CGAAGGGGTTCTGAAGAAACT 57.873 47.619 7.97 0.00 41.34 2.66
6601 10507 3.477530 CGAAGGGGTTCTGAAGAAACTT 58.522 45.455 7.97 6.79 41.34 2.66
6602 10508 3.251004 CGAAGGGGTTCTGAAGAAACTTG 59.749 47.826 7.97 0.00 41.34 3.16
6603 10509 4.461198 GAAGGGGTTCTGAAGAAACTTGA 58.539 43.478 7.97 0.00 41.34 3.02
6604 10510 3.821748 AGGGGTTCTGAAGAAACTTGAC 58.178 45.455 7.97 0.00 41.34 3.18
6605 10511 2.548480 GGGGTTCTGAAGAAACTTGACG 59.452 50.000 7.97 0.00 41.34 4.35
6606 10512 2.031944 GGGTTCTGAAGAAACTTGACGC 60.032 50.000 7.97 0.00 41.34 5.19
6607 10513 2.031944 GGTTCTGAAGAAACTTGACGCC 60.032 50.000 0.70 0.00 38.65 5.68
6608 10514 2.612212 GTTCTGAAGAAACTTGACGCCA 59.388 45.455 0.00 0.00 35.58 5.69
6609 10515 2.210116 TCTGAAGAAACTTGACGCCAC 58.790 47.619 0.00 0.00 0.00 5.01
6610 10516 1.939934 CTGAAGAAACTTGACGCCACA 59.060 47.619 0.00 0.00 0.00 4.17
6611 10517 1.668751 TGAAGAAACTTGACGCCACAC 59.331 47.619 0.00 0.00 0.00 3.82
6612 10518 1.940613 GAAGAAACTTGACGCCACACT 59.059 47.619 0.00 0.00 0.00 3.55
6613 10519 1.299541 AGAAACTTGACGCCACACTG 58.700 50.000 0.00 0.00 0.00 3.66
6614 10520 0.317020 GAAACTTGACGCCACACTGC 60.317 55.000 0.00 0.00 0.00 4.40
6615 10521 0.748005 AAACTTGACGCCACACTGCT 60.748 50.000 0.00 0.00 0.00 4.24
6616 10522 1.439353 AACTTGACGCCACACTGCTG 61.439 55.000 0.00 0.00 0.00 4.41
6617 10523 3.245948 CTTGACGCCACACTGCTGC 62.246 63.158 0.00 0.00 0.00 5.25
6620 10526 4.648626 ACGCCACACTGCTGCCAT 62.649 61.111 0.00 0.00 0.00 4.40
6621 10527 2.436469 CGCCACACTGCTGCCATA 60.436 61.111 0.00 0.00 0.00 2.74
6622 10528 2.466982 CGCCACACTGCTGCCATAG 61.467 63.158 0.00 0.00 0.00 2.23
6623 10529 1.078214 GCCACACTGCTGCCATAGA 60.078 57.895 0.00 0.00 0.00 1.98
6624 10530 1.372087 GCCACACTGCTGCCATAGAC 61.372 60.000 0.00 0.00 0.00 2.59
6625 10531 0.251354 CCACACTGCTGCCATAGACT 59.749 55.000 0.00 0.00 0.00 3.24
6626 10532 1.366679 CACACTGCTGCCATAGACTG 58.633 55.000 0.00 0.00 0.00 3.51
6627 10533 1.066645 CACACTGCTGCCATAGACTGA 60.067 52.381 0.00 0.00 0.00 3.41
6628 10534 1.206610 ACACTGCTGCCATAGACTGAG 59.793 52.381 0.00 0.00 0.00 3.35
6629 10535 1.479730 CACTGCTGCCATAGACTGAGA 59.520 52.381 0.00 0.00 0.00 3.27
6630 10536 2.102757 CACTGCTGCCATAGACTGAGAT 59.897 50.000 0.00 0.00 0.00 2.75
6631 10537 2.770802 ACTGCTGCCATAGACTGAGATT 59.229 45.455 0.00 0.00 0.00 2.40
6632 10538 3.132160 CTGCTGCCATAGACTGAGATTG 58.868 50.000 0.00 0.00 0.00 2.67
6633 10539 2.502947 TGCTGCCATAGACTGAGATTGT 59.497 45.455 0.00 0.00 0.00 2.71
6634 10540 2.871022 GCTGCCATAGACTGAGATTGTG 59.129 50.000 0.00 0.00 0.00 3.33
6635 10541 2.871022 CTGCCATAGACTGAGATTGTGC 59.129 50.000 0.00 0.00 0.00 4.57
6636 10542 2.216898 GCCATAGACTGAGATTGTGCC 58.783 52.381 0.00 0.00 0.00 5.01
6637 10543 2.477825 CCATAGACTGAGATTGTGCCG 58.522 52.381 0.00 0.00 0.00 5.69
6638 10544 2.477825 CATAGACTGAGATTGTGCCGG 58.522 52.381 0.00 0.00 0.00 6.13
6639 10545 1.847328 TAGACTGAGATTGTGCCGGA 58.153 50.000 5.05 0.00 0.00 5.14
6640 10546 1.198713 AGACTGAGATTGTGCCGGAT 58.801 50.000 5.05 0.00 0.00 4.18
6641 10547 1.556911 AGACTGAGATTGTGCCGGATT 59.443 47.619 5.05 0.00 0.00 3.01
6642 10548 1.667724 GACTGAGATTGTGCCGGATTG 59.332 52.381 5.05 0.00 0.00 2.67
6643 10549 1.003580 ACTGAGATTGTGCCGGATTGT 59.996 47.619 5.05 0.00 0.00 2.71
6644 10550 1.399440 CTGAGATTGTGCCGGATTGTG 59.601 52.381 5.05 0.00 0.00 3.33
6645 10551 1.003003 TGAGATTGTGCCGGATTGTGA 59.997 47.619 5.05 0.00 0.00 3.58
6646 10552 1.667724 GAGATTGTGCCGGATTGTGAG 59.332 52.381 5.05 0.00 0.00 3.51
6647 10553 0.099436 GATTGTGCCGGATTGTGAGC 59.901 55.000 5.05 0.00 0.00 4.26
6648 10554 0.608856 ATTGTGCCGGATTGTGAGCA 60.609 50.000 5.05 0.00 0.00 4.26
6649 10555 1.236616 TTGTGCCGGATTGTGAGCAG 61.237 55.000 5.05 0.00 35.56 4.24
6650 10556 2.747460 TGCCGGATTGTGAGCAGC 60.747 61.111 5.05 0.00 0.00 5.25
6651 10557 2.747460 GCCGGATTGTGAGCAGCA 60.747 61.111 5.05 0.00 0.00 4.41
6659 10565 3.479370 GTGAGCAGCACGTCCATC 58.521 61.111 0.00 0.00 37.83 3.51
6660 10566 1.374631 GTGAGCAGCACGTCCATCA 60.375 57.895 0.00 0.00 37.83 3.07
6661 10567 1.374631 TGAGCAGCACGTCCATCAC 60.375 57.895 0.00 0.00 0.00 3.06
6662 10568 1.374631 GAGCAGCACGTCCATCACA 60.375 57.895 0.00 0.00 0.00 3.58
6663 10569 1.357258 GAGCAGCACGTCCATCACAG 61.357 60.000 0.00 0.00 0.00 3.66
6664 10570 1.669115 GCAGCACGTCCATCACAGT 60.669 57.895 0.00 0.00 0.00 3.55
6665 10571 1.230635 GCAGCACGTCCATCACAGTT 61.231 55.000 0.00 0.00 0.00 3.16
6666 10572 0.514255 CAGCACGTCCATCACAGTTG 59.486 55.000 0.00 0.00 0.00 3.16
6667 10573 1.207593 GCACGTCCATCACAGTTGC 59.792 57.895 0.00 0.00 0.00 4.17
6668 10574 1.868997 CACGTCCATCACAGTTGCC 59.131 57.895 0.00 0.00 0.00 4.52
6669 10575 0.603707 CACGTCCATCACAGTTGCCT 60.604 55.000 0.00 0.00 0.00 4.75
6670 10576 0.320771 ACGTCCATCACAGTTGCCTC 60.321 55.000 0.00 0.00 0.00 4.70
6671 10577 1.021390 CGTCCATCACAGTTGCCTCC 61.021 60.000 0.00 0.00 0.00 4.30
6672 10578 0.326264 GTCCATCACAGTTGCCTCCT 59.674 55.000 0.00 0.00 0.00 3.69
6673 10579 1.067295 TCCATCACAGTTGCCTCCTT 58.933 50.000 0.00 0.00 0.00 3.36
6674 10580 1.425066 TCCATCACAGTTGCCTCCTTT 59.575 47.619 0.00 0.00 0.00 3.11
6675 10581 1.542915 CCATCACAGTTGCCTCCTTTG 59.457 52.381 0.00 0.00 0.00 2.77
6676 10582 1.068055 CATCACAGTTGCCTCCTTTGC 60.068 52.381 0.00 0.00 0.00 3.68
6677 10583 0.823356 TCACAGTTGCCTCCTTTGCC 60.823 55.000 0.00 0.00 0.00 4.52
6678 10584 1.531602 ACAGTTGCCTCCTTTGCCC 60.532 57.895 0.00 0.00 0.00 5.36
6679 10585 1.228675 CAGTTGCCTCCTTTGCCCT 60.229 57.895 0.00 0.00 0.00 5.19
6680 10586 1.228675 AGTTGCCTCCTTTGCCCTG 60.229 57.895 0.00 0.00 0.00 4.45
6681 10587 1.228552 GTTGCCTCCTTTGCCCTGA 60.229 57.895 0.00 0.00 0.00 3.86
6682 10588 0.827507 GTTGCCTCCTTTGCCCTGAA 60.828 55.000 0.00 0.00 0.00 3.02
6683 10589 0.105760 TTGCCTCCTTTGCCCTGAAA 60.106 50.000 0.00 0.00 0.00 2.69
6684 10590 0.105760 TGCCTCCTTTGCCCTGAAAA 60.106 50.000 0.00 0.00 0.00 2.29
6685 10591 1.269958 GCCTCCTTTGCCCTGAAAAT 58.730 50.000 0.00 0.00 0.00 1.82
6686 10592 1.066645 GCCTCCTTTGCCCTGAAAATG 60.067 52.381 0.00 0.00 0.00 2.32
6687 10593 1.066645 CCTCCTTTGCCCTGAAAATGC 60.067 52.381 0.00 0.00 0.00 3.56
6688 10594 1.619827 CTCCTTTGCCCTGAAAATGCA 59.380 47.619 0.00 0.00 0.00 3.96
6689 10595 1.619827 TCCTTTGCCCTGAAAATGCAG 59.380 47.619 0.00 0.00 36.21 4.41
6690 10596 1.345415 CCTTTGCCCTGAAAATGCAGT 59.655 47.619 0.00 0.00 36.21 4.40
6691 10597 2.409975 CTTTGCCCTGAAAATGCAGTG 58.590 47.619 0.00 0.00 36.21 3.66
6692 10598 1.702182 TTGCCCTGAAAATGCAGTGA 58.298 45.000 0.00 0.00 36.21 3.41
6693 10599 1.927487 TGCCCTGAAAATGCAGTGAT 58.073 45.000 0.00 0.00 34.06 3.06
6694 10600 2.250031 TGCCCTGAAAATGCAGTGATT 58.750 42.857 0.00 0.00 34.06 2.57
6695 10601 2.028839 TGCCCTGAAAATGCAGTGATTG 60.029 45.455 0.00 0.00 34.06 2.67
6704 10610 2.716988 GCAGTGATTGCGTTCTTGC 58.283 52.632 0.00 0.00 44.09 4.01
6705 10611 0.730494 GCAGTGATTGCGTTCTTGCC 60.730 55.000 0.00 0.00 44.09 4.52
6706 10612 0.592637 CAGTGATTGCGTTCTTGCCA 59.407 50.000 0.00 0.00 0.00 4.92
6707 10613 1.200716 CAGTGATTGCGTTCTTGCCAT 59.799 47.619 0.00 0.00 0.00 4.40
6708 10614 2.419673 CAGTGATTGCGTTCTTGCCATA 59.580 45.455 0.00 0.00 0.00 2.74
6709 10615 3.065786 CAGTGATTGCGTTCTTGCCATAT 59.934 43.478 0.00 0.00 0.00 1.78
6710 10616 3.696051 AGTGATTGCGTTCTTGCCATATT 59.304 39.130 0.00 0.00 0.00 1.28
6711 10617 4.158394 AGTGATTGCGTTCTTGCCATATTT 59.842 37.500 0.00 0.00 0.00 1.40
6712 10618 4.500477 GTGATTGCGTTCTTGCCATATTTC 59.500 41.667 0.00 0.00 0.00 2.17
6713 10619 3.502191 TTGCGTTCTTGCCATATTTCC 57.498 42.857 0.00 0.00 0.00 3.13
6714 10620 1.748493 TGCGTTCTTGCCATATTTCCC 59.252 47.619 0.00 0.00 0.00 3.97
6715 10621 1.748493 GCGTTCTTGCCATATTTCCCA 59.252 47.619 0.00 0.00 0.00 4.37
6716 10622 2.362077 GCGTTCTTGCCATATTTCCCAT 59.638 45.455 0.00 0.00 0.00 4.00
6717 10623 3.568007 GCGTTCTTGCCATATTTCCCATA 59.432 43.478 0.00 0.00 0.00 2.74
6718 10624 4.320494 GCGTTCTTGCCATATTTCCCATAG 60.320 45.833 0.00 0.00 0.00 2.23
6719 10625 4.216257 CGTTCTTGCCATATTTCCCATAGG 59.784 45.833 0.00 0.00 0.00 2.57
6720 10626 4.387026 TCTTGCCATATTTCCCATAGGG 57.613 45.455 0.00 0.00 46.11 3.53
6722 10628 1.852633 GCCATATTTCCCATAGGGCC 58.147 55.000 6.30 0.00 43.42 5.80
6723 10629 1.077005 GCCATATTTCCCATAGGGCCA 59.923 52.381 6.18 0.00 43.42 5.36
6724 10630 2.885554 GCCATATTTCCCATAGGGCCAG 60.886 54.545 6.18 0.00 43.42 4.85
6725 10631 2.450476 CATATTTCCCATAGGGCCAGC 58.550 52.381 6.18 0.00 43.94 4.85
6726 10632 1.528600 TATTTCCCATAGGGCCAGCA 58.471 50.000 6.18 0.00 43.94 4.41
6727 10633 0.862554 ATTTCCCATAGGGCCAGCAT 59.137 50.000 6.18 0.00 43.94 3.79
6728 10634 0.185901 TTTCCCATAGGGCCAGCATC 59.814 55.000 6.18 0.00 43.94 3.91
6729 10635 2.033141 CCCATAGGGCCAGCATCG 59.967 66.667 6.18 0.00 35.35 3.84
6730 10636 2.822637 CCCATAGGGCCAGCATCGT 61.823 63.158 6.18 0.00 35.35 3.73
6731 10637 1.302033 CCATAGGGCCAGCATCGTC 60.302 63.158 6.18 0.00 0.00 4.20
6732 10638 1.447217 CATAGGGCCAGCATCGTCA 59.553 57.895 6.18 0.00 0.00 4.35
6733 10639 0.602106 CATAGGGCCAGCATCGTCAG 60.602 60.000 6.18 0.00 0.00 3.51
6734 10640 1.762522 ATAGGGCCAGCATCGTCAGG 61.763 60.000 6.18 0.00 0.00 3.86
6735 10641 4.864334 GGGCCAGCATCGTCAGGG 62.864 72.222 4.39 0.00 0.00 4.45
6736 10642 3.785859 GGCCAGCATCGTCAGGGA 61.786 66.667 0.00 0.00 0.00 4.20
6737 10643 2.507944 GCCAGCATCGTCAGGGAT 59.492 61.111 0.00 0.00 0.00 3.85
6738 10644 1.153086 GCCAGCATCGTCAGGGATT 60.153 57.895 0.00 0.00 0.00 3.01
6739 10645 0.749454 GCCAGCATCGTCAGGGATTT 60.749 55.000 0.00 0.00 0.00 2.17
6740 10646 1.475034 GCCAGCATCGTCAGGGATTTA 60.475 52.381 0.00 0.00 0.00 1.40
6741 10647 2.917933 CCAGCATCGTCAGGGATTTAA 58.082 47.619 0.00 0.00 0.00 1.52
6742 10648 3.480470 CCAGCATCGTCAGGGATTTAAT 58.520 45.455 0.00 0.00 0.00 1.40
6743 10649 3.885297 CCAGCATCGTCAGGGATTTAATT 59.115 43.478 0.00 0.00 0.00 1.40
6744 10650 4.023707 CCAGCATCGTCAGGGATTTAATTC 60.024 45.833 0.00 0.00 0.00 2.17
6745 10651 4.023707 CAGCATCGTCAGGGATTTAATTCC 60.024 45.833 7.72 7.72 34.83 3.01
6746 10652 4.137543 GCATCGTCAGGGATTTAATTCCT 58.862 43.478 14.46 0.00 35.97 3.36
6747 10653 4.580580 GCATCGTCAGGGATTTAATTCCTT 59.419 41.667 14.46 5.87 35.97 3.36
6748 10654 5.067805 GCATCGTCAGGGATTTAATTCCTTT 59.932 40.000 14.46 3.17 35.97 3.11
6749 10655 6.729187 CATCGTCAGGGATTTAATTCCTTTC 58.271 40.000 14.46 0.00 35.97 2.62
6750 10656 5.190677 TCGTCAGGGATTTAATTCCTTTCC 58.809 41.667 14.46 0.00 35.97 3.13
6751 10657 5.045140 TCGTCAGGGATTTAATTCCTTTCCT 60.045 40.000 14.46 2.66 35.97 3.36
6752 10658 5.066505 CGTCAGGGATTTAATTCCTTTCCTG 59.933 44.000 14.46 12.68 41.17 3.86
6753 10659 5.360999 GTCAGGGATTTAATTCCTTTCCTGG 59.639 44.000 14.46 0.00 40.46 4.45
6754 10660 5.016245 TCAGGGATTTAATTCCTTTCCTGGT 59.984 40.000 14.46 0.00 40.46 4.00
6755 10661 6.218730 TCAGGGATTTAATTCCTTTCCTGGTA 59.781 38.462 14.46 0.00 40.46 3.25
6756 10662 6.321435 CAGGGATTTAATTCCTTTCCTGGTAC 59.679 42.308 14.46 0.00 37.47 3.34
6757 10663 5.597182 GGGATTTAATTCCTTTCCTGGTACC 59.403 44.000 14.46 4.43 35.97 3.34
6758 10664 5.597182 GGATTTAATTCCTTTCCTGGTACCC 59.403 44.000 10.07 0.00 32.68 3.69
6759 10665 2.801077 AATTCCTTTCCTGGTACCCG 57.199 50.000 10.07 2.14 0.00 5.28
6760 10666 0.916809 ATTCCTTTCCTGGTACCCGG 59.083 55.000 16.00 16.00 0.00 5.73
6761 10667 1.844544 TTCCTTTCCTGGTACCCGGC 61.845 60.000 17.23 0.00 0.00 6.13
6762 10668 2.271173 CTTTCCTGGTACCCGGCC 59.729 66.667 17.23 0.00 0.00 6.13
6763 10669 3.675619 CTTTCCTGGTACCCGGCCG 62.676 68.421 21.04 21.04 0.00 6.13
6781 10687 3.798380 CGCAGCCGTGATCATTGA 58.202 55.556 0.00 0.00 0.00 2.57
6782 10688 1.349627 CGCAGCCGTGATCATTGAC 59.650 57.895 0.00 0.00 0.00 3.18
6783 10689 1.349627 GCAGCCGTGATCATTGACG 59.650 57.895 0.00 0.00 35.31 4.35
6784 10690 1.349627 CAGCCGTGATCATTGACGC 59.650 57.895 0.00 0.00 34.18 5.19
6785 10691 1.815421 AGCCGTGATCATTGACGCC 60.815 57.895 0.00 0.00 34.18 5.68
6786 10692 2.106074 GCCGTGATCATTGACGCCA 61.106 57.895 0.00 0.00 34.18 5.69
6787 10693 1.439353 GCCGTGATCATTGACGCCAT 61.439 55.000 0.00 0.00 34.18 4.40
6788 10694 0.583438 CCGTGATCATTGACGCCATC 59.417 55.000 0.00 0.00 34.18 3.51
6789 10695 1.575244 CGTGATCATTGACGCCATCT 58.425 50.000 0.00 0.00 0.00 2.90
6790 10696 1.935873 CGTGATCATTGACGCCATCTT 59.064 47.619 0.00 0.00 0.00 2.40
6791 10697 2.033407 CGTGATCATTGACGCCATCTTC 60.033 50.000 0.00 0.00 0.00 2.87
6792 10698 3.201290 GTGATCATTGACGCCATCTTCT 58.799 45.455 0.00 0.00 0.00 2.85
6793 10699 3.247173 GTGATCATTGACGCCATCTTCTC 59.753 47.826 0.00 0.00 0.00 2.87
6794 10700 2.315925 TCATTGACGCCATCTTCTCC 57.684 50.000 0.00 0.00 0.00 3.71
6795 10701 1.554617 TCATTGACGCCATCTTCTCCA 59.445 47.619 0.00 0.00 0.00 3.86
6796 10702 1.938577 CATTGACGCCATCTTCTCCAG 59.061 52.381 0.00 0.00 0.00 3.86
6797 10703 0.391661 TTGACGCCATCTTCTCCAGC 60.392 55.000 0.00 0.00 0.00 4.85
6800 10706 4.434685 GCCATCTTCTCCAGCGAG 57.565 61.111 0.00 0.00 37.48 5.03
6801 10707 1.886777 GCCATCTTCTCCAGCGAGC 60.887 63.158 0.00 0.00 35.94 5.03
6802 10708 1.821936 CCATCTTCTCCAGCGAGCT 59.178 57.895 0.00 0.00 35.94 4.09
6803 10709 0.530211 CCATCTTCTCCAGCGAGCTG 60.530 60.000 17.44 17.44 43.26 4.24
6817 10723 2.352422 GCTGGTGCTGTGGATCCA 59.648 61.111 11.44 11.44 36.03 3.41
6818 10724 1.303561 GCTGGTGCTGTGGATCCAA 60.304 57.895 18.20 6.23 36.03 3.53
6819 10725 1.310933 GCTGGTGCTGTGGATCCAAG 61.311 60.000 18.20 16.55 36.03 3.61
6820 10726 0.037303 CTGGTGCTGTGGATCCAAGT 59.963 55.000 18.20 0.00 0.00 3.16
6821 10727 0.478072 TGGTGCTGTGGATCCAAGTT 59.522 50.000 18.20 0.00 0.00 2.66
6822 10728 0.883833 GGTGCTGTGGATCCAAGTTG 59.116 55.000 18.20 8.03 0.00 3.16
6823 10729 1.609208 GTGCTGTGGATCCAAGTTGT 58.391 50.000 18.20 0.00 0.00 3.32
6824 10730 1.537202 GTGCTGTGGATCCAAGTTGTC 59.463 52.381 18.20 3.08 0.00 3.18
6825 10731 1.421268 TGCTGTGGATCCAAGTTGTCT 59.579 47.619 18.20 0.00 0.00 3.41
6826 10732 1.808945 GCTGTGGATCCAAGTTGTCTG 59.191 52.381 18.20 8.10 0.00 3.51
6827 10733 1.808945 CTGTGGATCCAAGTTGTCTGC 59.191 52.381 18.20 0.60 0.00 4.26
6828 10734 1.421268 TGTGGATCCAAGTTGTCTGCT 59.579 47.619 18.20 0.00 0.00 4.24
6829 10735 2.079925 GTGGATCCAAGTTGTCTGCTC 58.920 52.381 18.20 0.00 0.00 4.26
6830 10736 1.338105 TGGATCCAAGTTGTCTGCTCG 60.338 52.381 13.46 0.00 0.00 5.03
6831 10737 1.066858 GGATCCAAGTTGTCTGCTCGA 60.067 52.381 6.95 0.00 0.00 4.04
6832 10738 2.612972 GGATCCAAGTTGTCTGCTCGAA 60.613 50.000 6.95 0.00 0.00 3.71
6833 10739 2.613026 TCCAAGTTGTCTGCTCGAAA 57.387 45.000 1.45 0.00 0.00 3.46
6834 10740 2.912771 TCCAAGTTGTCTGCTCGAAAA 58.087 42.857 1.45 0.00 0.00 2.29
6835 10741 2.612212 TCCAAGTTGTCTGCTCGAAAAC 59.388 45.455 1.45 2.54 39.69 2.43
6836 10742 2.354510 CCAAGTTGTCTGCTCGAAAACA 59.645 45.455 1.45 0.00 41.48 2.83
6837 10743 3.003689 CCAAGTTGTCTGCTCGAAAACAT 59.996 43.478 1.45 0.00 41.48 2.71
6838 10744 3.885484 AGTTGTCTGCTCGAAAACATG 57.115 42.857 10.79 0.00 41.48 3.21
6839 10745 2.549754 AGTTGTCTGCTCGAAAACATGG 59.450 45.455 10.79 0.00 41.48 3.66
6840 10746 0.874390 TGTCTGCTCGAAAACATGGC 59.126 50.000 0.00 0.00 0.00 4.40
6841 10747 0.874390 GTCTGCTCGAAAACATGGCA 59.126 50.000 0.00 0.00 0.00 4.92
6842 10748 1.266718 GTCTGCTCGAAAACATGGCAA 59.733 47.619 0.00 0.00 32.43 4.52
6843 10749 2.095059 GTCTGCTCGAAAACATGGCAAT 60.095 45.455 0.00 0.00 32.43 3.56
6844 10750 2.095110 TCTGCTCGAAAACATGGCAATG 60.095 45.455 0.00 0.00 39.89 2.82
6858 10764 2.627791 CAATGTTGCCAGGTCGACA 58.372 52.632 18.91 6.45 35.06 4.35
6859 10765 0.518636 CAATGTTGCCAGGTCGACAG 59.481 55.000 18.91 9.10 34.16 3.51
6860 10766 0.108585 AATGTTGCCAGGTCGACAGT 59.891 50.000 18.91 0.02 34.16 3.55
6861 10767 0.108585 ATGTTGCCAGGTCGACAGTT 59.891 50.000 18.91 0.00 34.16 3.16
6862 10768 0.531974 TGTTGCCAGGTCGACAGTTC 60.532 55.000 18.91 4.09 0.00 3.01
6864 10770 2.432628 GCCAGGTCGACAGTTCGG 60.433 66.667 18.91 10.40 45.90 4.30
6869 10775 2.432628 GTCGACAGTTCGGCCCAG 60.433 66.667 11.55 0.00 44.45 4.45
6870 10776 2.599281 TCGACAGTTCGGCCCAGA 60.599 61.111 0.00 0.00 45.90 3.86
6871 10777 2.432628 CGACAGTTCGGCCCAGAC 60.433 66.667 0.00 0.00 41.89 3.51
6872 10778 2.432628 GACAGTTCGGCCCAGACG 60.433 66.667 0.00 0.00 34.09 4.18
6873 10779 3.934391 GACAGTTCGGCCCAGACGG 62.934 68.421 0.00 0.00 33.33 4.79
6874 10780 4.003788 CAGTTCGGCCCAGACGGT 62.004 66.667 0.00 0.00 33.33 4.83
6875 10781 3.692406 AGTTCGGCCCAGACGGTC 61.692 66.667 0.00 0.00 33.33 4.79
6876 10782 4.754667 GTTCGGCCCAGACGGTCC 62.755 72.222 4.14 0.00 33.33 4.46
6888 10794 3.550656 CGGTCCTCGTGAAGTTGC 58.449 61.111 0.00 0.00 0.00 4.17
6889 10795 1.300620 CGGTCCTCGTGAAGTTGCA 60.301 57.895 0.00 0.00 0.00 4.08
6890 10796 0.670546 CGGTCCTCGTGAAGTTGCAT 60.671 55.000 0.00 0.00 0.00 3.96
6891 10797 1.523758 GGTCCTCGTGAAGTTGCATT 58.476 50.000 0.00 0.00 0.00 3.56
6892 10798 1.197721 GGTCCTCGTGAAGTTGCATTG 59.802 52.381 0.00 0.00 0.00 2.82
6893 10799 0.874390 TCCTCGTGAAGTTGCATTGC 59.126 50.000 0.46 0.46 0.00 3.56
6894 10800 0.109597 CCTCGTGAAGTTGCATTGCC 60.110 55.000 6.12 0.00 0.00 4.52
6895 10801 0.592637 CTCGTGAAGTTGCATTGCCA 59.407 50.000 6.12 0.00 0.00 4.92
6896 10802 0.592637 TCGTGAAGTTGCATTGCCAG 59.407 50.000 6.12 0.00 0.00 4.85
6897 10803 0.592637 CGTGAAGTTGCATTGCCAGA 59.407 50.000 6.12 0.00 0.00 3.86
6898 10804 1.001487 CGTGAAGTTGCATTGCCAGAA 60.001 47.619 6.12 0.00 0.00 3.02
6899 10805 2.397549 GTGAAGTTGCATTGCCAGAAC 58.602 47.619 6.12 4.26 0.00 3.01
6900 10806 2.030371 TGAAGTTGCATTGCCAGAACA 58.970 42.857 6.12 0.00 0.00 3.18
6901 10807 2.034939 TGAAGTTGCATTGCCAGAACAG 59.965 45.455 6.12 0.00 0.00 3.16
6902 10808 0.963962 AGTTGCATTGCCAGAACAGG 59.036 50.000 6.12 0.00 0.00 4.00
6903 10809 0.675633 GTTGCATTGCCAGAACAGGT 59.324 50.000 6.12 0.00 0.00 4.00
6904 10810 0.675083 TTGCATTGCCAGAACAGGTG 59.325 50.000 6.12 0.00 0.00 4.00
6905 10811 1.080298 GCATTGCCAGAACAGGTGC 60.080 57.895 0.00 0.00 0.00 5.01
6906 10812 1.530013 GCATTGCCAGAACAGGTGCT 61.530 55.000 0.00 0.00 33.07 4.40
6907 10813 0.524862 CATTGCCAGAACAGGTGCTC 59.475 55.000 0.00 0.00 0.00 4.26
6908 10814 0.957395 ATTGCCAGAACAGGTGCTCG 60.957 55.000 0.00 0.00 0.00 5.03
6909 10815 2.743928 GCCAGAACAGGTGCTCGG 60.744 66.667 0.00 0.00 0.00 4.63
6910 10816 3.059982 CCAGAACAGGTGCTCGGA 58.940 61.111 0.00 0.00 0.00 4.55
6911 10817 1.079543 CCAGAACAGGTGCTCGGAG 60.080 63.158 0.00 0.00 0.00 4.63
6912 10818 1.739562 CAGAACAGGTGCTCGGAGC 60.740 63.158 22.78 22.78 42.82 4.70
6913 10819 1.910772 AGAACAGGTGCTCGGAGCT 60.911 57.895 28.42 9.16 42.97 4.09
6914 10820 1.446966 GAACAGGTGCTCGGAGCTC 60.447 63.158 28.42 24.44 42.97 4.09
6915 10821 1.882989 GAACAGGTGCTCGGAGCTCT 61.883 60.000 28.42 21.90 42.97 4.09
6916 10822 1.882989 AACAGGTGCTCGGAGCTCTC 61.883 60.000 28.42 18.34 42.97 3.20
6917 10823 2.036414 AGGTGCTCGGAGCTCTCA 59.964 61.111 28.42 7.59 42.97 3.27
6918 10824 1.607756 AGGTGCTCGGAGCTCTCAA 60.608 57.895 28.42 7.20 42.97 3.02
6919 10825 1.153667 GGTGCTCGGAGCTCTCAAG 60.154 63.158 28.42 9.65 42.97 3.02
6920 10826 1.153667 GTGCTCGGAGCTCTCAAGG 60.154 63.158 28.42 1.36 42.97 3.61
6921 10827 1.607756 TGCTCGGAGCTCTCAAGGT 60.608 57.895 28.42 0.00 42.97 3.50
6922 10828 1.188219 TGCTCGGAGCTCTCAAGGTT 61.188 55.000 28.42 0.00 42.97 3.50
6923 10829 0.459411 GCTCGGAGCTCTCAAGGTTC 60.459 60.000 22.32 0.00 38.45 3.62
6924 10830 0.174617 CTCGGAGCTCTCAAGGTTCC 59.825 60.000 14.64 0.00 32.07 3.62
6925 10831 1.153745 CGGAGCTCTCAAGGTTCCG 60.154 63.158 14.64 1.86 37.36 4.30
6926 10832 1.448717 GGAGCTCTCAAGGTTCCGC 60.449 63.158 14.64 0.00 32.07 5.54
6927 10833 1.807573 GAGCTCTCAAGGTTCCGCG 60.808 63.158 6.43 0.00 32.07 6.46
6928 10834 2.815647 GCTCTCAAGGTTCCGCGG 60.816 66.667 22.12 22.12 0.00 6.46
6929 10835 2.125512 CTCTCAAGGTTCCGCGGG 60.126 66.667 27.83 8.07 0.00 6.13
6930 10836 4.388499 TCTCAAGGTTCCGCGGGC 62.388 66.667 27.83 18.46 0.00 6.13
6931 10837 4.697756 CTCAAGGTTCCGCGGGCA 62.698 66.667 27.83 9.98 0.00 5.36
6932 10838 3.976701 CTCAAGGTTCCGCGGGCAT 62.977 63.158 27.83 13.88 0.00 4.40
6933 10839 2.124901 CAAGGTTCCGCGGGCATA 60.125 61.111 27.83 1.61 0.00 3.14
6934 10840 2.180204 CAAGGTTCCGCGGGCATAG 61.180 63.158 27.83 7.69 0.00 2.23
6935 10841 2.666098 AAGGTTCCGCGGGCATAGT 61.666 57.895 27.83 3.57 0.00 2.12
6936 10842 2.124860 GGTTCCGCGGGCATAGTT 60.125 61.111 27.83 0.00 0.00 2.24
6937 10843 2.469516 GGTTCCGCGGGCATAGTTG 61.470 63.158 27.83 0.00 0.00 3.16
6938 10844 1.448893 GTTCCGCGGGCATAGTTGA 60.449 57.895 27.83 0.00 0.00 3.18
6939 10845 1.448893 TTCCGCGGGCATAGTTGAC 60.449 57.895 27.83 0.00 0.00 3.18
6940 10846 2.125310 CCGCGGGCATAGTTGACA 60.125 61.111 20.10 0.00 29.63 3.58
6941 10847 2.173669 CCGCGGGCATAGTTGACAG 61.174 63.158 20.10 0.00 29.63 3.51
6942 10848 1.153647 CGCGGGCATAGTTGACAGA 60.154 57.895 0.00 0.00 29.63 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 7.066766 GCAATGTAGATTCTTGTCATCTCCTTT 59.933 37.037 0.00 0.00 32.94 3.11
102 103 2.687935 GTCTTCTCAGCTTCGATCCTCT 59.312 50.000 0.00 0.00 0.00 3.69
126 127 0.449388 GGTGGCGCTTCATCTTCAAG 59.551 55.000 7.64 0.00 0.00 3.02
194 208 1.839747 ACGGAGGGCAACACTGGTA 60.840 57.895 0.00 0.00 39.74 3.25
267 281 9.751542 ATTTCAAGAAACTACTATGTATCTCCG 57.248 33.333 0.00 0.00 32.51 4.63
305 319 0.961019 GACTTTGCCAATGCCACTGA 59.039 50.000 0.00 0.00 36.33 3.41
332 346 6.056428 ACAAACCGTGATAACTCTGAAAAC 57.944 37.500 0.00 0.00 0.00 2.43
366 380 2.630580 GAGGACACCCTAATCCTAGCTG 59.369 54.545 0.00 0.00 45.74 4.24
471 501 0.958382 TACGGTGCACTGGAAATGCC 60.958 55.000 28.65 2.17 42.69 4.40
484 515 1.276989 TGCTTCCTTAGGGTTACGGTG 59.723 52.381 0.00 0.00 0.00 4.94
495 526 8.267894 AGAGCAAATTATTACTCTGCTTCCTTA 58.732 33.333 8.90 0.00 43.19 2.69
594 814 5.303747 TGACACCATTAGGCAATTTTACG 57.696 39.130 0.00 0.00 39.06 3.18
684 917 0.725784 GCGTGTGGCATTCAACTTCG 60.726 55.000 0.00 0.00 42.87 3.79
710 943 6.762333 TCTGCCTGTGTATACTATACGTAGA 58.238 40.000 4.17 0.00 0.00 2.59
711 944 7.361031 CCTTCTGCCTGTGTATACTATACGTAG 60.361 44.444 4.17 0.00 0.00 3.51
712 945 6.429078 CCTTCTGCCTGTGTATACTATACGTA 59.571 42.308 4.17 0.00 0.00 3.57
713 946 5.241064 CCTTCTGCCTGTGTATACTATACGT 59.759 44.000 4.17 0.00 0.00 3.57
714 947 5.472478 TCCTTCTGCCTGTGTATACTATACG 59.528 44.000 4.17 0.00 0.00 3.06
715 948 6.896021 TCCTTCTGCCTGTGTATACTATAC 57.104 41.667 4.17 0.00 0.00 1.47
716 949 7.067421 AGTTCCTTCTGCCTGTGTATACTATA 58.933 38.462 4.17 0.00 0.00 1.31
717 950 5.900123 AGTTCCTTCTGCCTGTGTATACTAT 59.100 40.000 4.17 0.00 0.00 2.12
718 951 5.269991 AGTTCCTTCTGCCTGTGTATACTA 58.730 41.667 4.17 0.00 0.00 1.82
719 952 4.097418 AGTTCCTTCTGCCTGTGTATACT 58.903 43.478 4.17 0.00 0.00 2.12
720 953 4.473477 AGTTCCTTCTGCCTGTGTATAC 57.527 45.455 0.00 0.00 0.00 1.47
721 954 5.395324 GCTTAGTTCCTTCTGCCTGTGTATA 60.395 44.000 0.00 0.00 0.00 1.47
722 955 4.624125 GCTTAGTTCCTTCTGCCTGTGTAT 60.624 45.833 0.00 0.00 0.00 2.29
725 958 2.079925 GCTTAGTTCCTTCTGCCTGTG 58.920 52.381 0.00 0.00 0.00 3.66
773 1015 8.307483 TCACAACTTGGTTTAGATTTTGAACAA 58.693 29.630 0.00 0.00 0.00 2.83
842 1116 8.734593 AGACTGCTTAAATAGAGGGAAGATAT 57.265 34.615 0.00 0.00 0.00 1.63
843 1117 7.040340 CGAGACTGCTTAAATAGAGGGAAGATA 60.040 40.741 0.00 0.00 0.00 1.98
894 1168 0.733909 TTGCTCGTGATGACTCTGCG 60.734 55.000 0.00 0.00 0.00 5.18
943 1229 0.654683 CGTGGAAGCTAGCAATCAGC 59.345 55.000 18.83 9.81 46.19 4.26
944 1230 0.654683 GCGTGGAAGCTAGCAATCAG 59.345 55.000 18.83 10.60 0.00 2.90
1311 1597 2.357034 GAAAGCACGACGCCCTGA 60.357 61.111 0.00 0.00 44.04 3.86
1681 2064 1.968017 TACCACGGAAGCTCGTCGT 60.968 57.895 3.88 3.88 41.86 4.34
1809 2206 4.058124 TCCGAATTGAAATAGCTCATCCG 58.942 43.478 0.00 0.00 0.00 4.18
1884 2281 5.511729 GCAAAGGATGCGTTGATTAACTAAC 59.488 40.000 16.52 0.00 46.87 2.34
2040 2440 2.441164 ATCTCCCGCAGCGTCTCT 60.441 61.111 15.05 0.00 0.00 3.10
2948 4566 8.966868 TGTTGAGTAATTAATGGAAAGGGATTC 58.033 33.333 0.00 0.00 37.31 2.52
2949 4567 8.893563 TGTTGAGTAATTAATGGAAAGGGATT 57.106 30.769 0.00 0.00 0.00 3.01
2950 4568 8.336235 TCTGTTGAGTAATTAATGGAAAGGGAT 58.664 33.333 0.00 0.00 0.00 3.85
2951 4569 7.695055 TCTGTTGAGTAATTAATGGAAAGGGA 58.305 34.615 0.00 0.00 0.00 4.20
2967 4589 8.506168 TGAACTTTGTTATCTTTCTGTTGAGT 57.494 30.769 0.00 0.00 0.00 3.41
3086 4708 8.616076 GCTTGCTAACTGAAGTGATGTTATAAT 58.384 33.333 0.00 0.00 0.00 1.28
3142 4767 3.378742 TGACACACGGCAAGTTTTTGTAT 59.621 39.130 0.00 0.00 36.65 2.29
3174 4800 2.542020 TTCAGTCACGCAAGGATGAA 57.458 45.000 0.00 0.00 46.39 2.57
3175 4801 2.542020 TTTCAGTCACGCAAGGATGA 57.458 45.000 0.00 0.00 46.39 2.92
3218 4845 1.269102 CGTCAGGTTCGTGACACTCTT 60.269 52.381 20.27 0.00 46.19 2.85
3230 4857 0.466543 TAAGTGCCACACGTCAGGTT 59.533 50.000 0.00 0.00 39.64 3.50
3932 7314 7.710907 TCATTTTCTTCAGTTATCCATCTACCG 59.289 37.037 0.00 0.00 0.00 4.02
3933 7315 8.964476 TCATTTTCTTCAGTTATCCATCTACC 57.036 34.615 0.00 0.00 0.00 3.18
3938 7320 8.844244 GCAGTATCATTTTCTTCAGTTATCCAT 58.156 33.333 0.00 0.00 0.00 3.41
3939 7321 8.049117 AGCAGTATCATTTTCTTCAGTTATCCA 58.951 33.333 0.00 0.00 0.00 3.41
3940 7322 8.443953 AGCAGTATCATTTTCTTCAGTTATCC 57.556 34.615 0.00 0.00 0.00 2.59
3961 7343 5.346822 GCATGTTTTGTCAAAGGATTAGCAG 59.653 40.000 0.00 0.00 0.00 4.24
4028 7428 5.428253 AGAGTTTCTTGTGCACTTTGACTA 58.572 37.500 19.41 0.00 0.00 2.59
4292 8104 5.440207 TGTCCTGAGGAATCAATTGATGA 57.560 39.130 21.39 9.64 43.67 2.92
4395 8207 1.548719 CCGAGTCACCTTGTCCATGTA 59.451 52.381 0.00 0.00 0.00 2.29
4454 8266 2.679450 TCAAAATGTACGTGGAGTCCG 58.321 47.619 4.30 0.00 0.00 4.79
4455 8267 4.514066 AGTTTCAAAATGTACGTGGAGTCC 59.486 41.667 0.73 0.73 0.00 3.85
4456 8268 5.668558 AGTTTCAAAATGTACGTGGAGTC 57.331 39.130 0.00 0.00 0.00 3.36
4457 8269 6.094325 TGAAAGTTTCAAAATGTACGTGGAGT 59.906 34.615 15.92 0.00 36.59 3.85
4543 8363 1.625228 CCATCTTCACCACCTCCCCTA 60.625 57.143 0.00 0.00 0.00 3.53
4980 8838 4.277257 TGAAATTCAGCGGATTTCATCG 57.723 40.909 16.20 0.00 38.79 3.84
5006 8864 8.656849 ACGTAAATATTTCAGTGTCTGCTAAAG 58.343 33.333 3.39 0.00 0.00 1.85
5111 8992 1.408822 GGGCCGAAATCTCCACTTGAT 60.409 52.381 0.00 0.00 0.00 2.57
5119 9000 1.095600 GGTCAAAGGGCCGAAATCTC 58.904 55.000 0.00 0.00 0.00 2.75
5203 9084 9.195831 GTATCGTGAGTATCGTTTTTCAATTTC 57.804 33.333 0.00 0.00 38.61 2.17
5207 9088 5.858049 ACGTATCGTGAGTATCGTTTTTCAA 59.142 36.000 0.00 0.00 39.18 2.69
5209 9090 5.921784 ACGTATCGTGAGTATCGTTTTTC 57.078 39.130 0.00 0.00 39.18 2.29
5210 9091 5.858049 TCAACGTATCGTGAGTATCGTTTTT 59.142 36.000 0.00 0.00 39.99 1.94
5216 9097 5.986936 TCAGATCAACGTATCGTGAGTATC 58.013 41.667 0.00 0.00 39.99 2.24
5219 9100 4.096532 ACATCAGATCAACGTATCGTGAGT 59.903 41.667 0.00 0.00 39.99 3.41
5256 9137 3.016736 CCCTTCCAAATATCTGCGTTGT 58.983 45.455 0.00 0.00 0.00 3.32
5345 9226 3.107601 CACCAGGGAAATCAGGAGTAGA 58.892 50.000 0.00 0.00 0.00 2.59
5348 9229 0.329596 GCACCAGGGAAATCAGGAGT 59.670 55.000 0.00 0.00 0.00 3.85
5450 9331 1.153086 GCCCTCCACGAGCATCATT 60.153 57.895 0.00 0.00 33.17 2.57
5498 9379 1.288188 TGATGCCCATGAGGAAGTCA 58.712 50.000 0.00 0.00 40.38 3.41
5970 9854 9.593134 ACTCATAAGCAACAATCTTCTACTAAG 57.407 33.333 0.00 0.00 0.00 2.18
6210 10114 5.278660 GCCTTAATAGGAACTTGATGCATGG 60.279 44.000 2.46 0.00 45.05 3.66
6214 10118 5.532406 TGATGCCTTAATAGGAACTTGATGC 59.468 40.000 0.00 0.00 45.05 3.91
6243 10147 6.750501 GCTCGTAAACTTATCATGTCACACTA 59.249 38.462 0.00 0.00 0.00 2.74
6249 10153 4.270325 GGGTGCTCGTAAACTTATCATGTC 59.730 45.833 0.00 0.00 0.00 3.06
6256 10160 4.523943 TGTTAGAGGGTGCTCGTAAACTTA 59.476 41.667 0.00 0.00 0.00 2.24
6305 10209 5.497474 GTGGTGGTCTGTGATAAGGTTTAT 58.503 41.667 0.00 0.00 0.00 1.40
6316 10220 0.388649 GCTAGTCGTGGTGGTCTGTG 60.389 60.000 0.00 0.00 0.00 3.66
6322 10226 0.250124 TTTGGTGCTAGTCGTGGTGG 60.250 55.000 0.00 0.00 0.00 4.61
6324 10228 0.602905 GCTTTGGTGCTAGTCGTGGT 60.603 55.000 0.00 0.00 0.00 4.16
6332 10236 8.471609 ACTTTACTTTAAAAAGCTTTGGTGCTA 58.528 29.630 13.54 0.00 43.24 3.49
6368 10273 6.897259 TGTCGTTTTAGATAATGGTGTAGC 57.103 37.500 0.00 0.00 0.00 3.58
6417 10323 2.158971 GCCTTGGCTGGTTCTTCAAAAA 60.159 45.455 4.11 0.00 0.00 1.94
6418 10324 1.412343 GCCTTGGCTGGTTCTTCAAAA 59.588 47.619 4.11 0.00 0.00 2.44
6419 10325 1.039856 GCCTTGGCTGGTTCTTCAAA 58.960 50.000 4.11 0.00 0.00 2.69
6420 10326 0.185901 AGCCTTGGCTGGTTCTTCAA 59.814 50.000 13.99 0.00 0.00 2.69
6421 10327 0.538057 CAGCCTTGGCTGGTTCTTCA 60.538 55.000 28.58 0.00 34.47 3.02
6422 10328 0.250901 TCAGCCTTGGCTGGTTCTTC 60.251 55.000 33.12 0.00 38.27 2.87
6423 10329 0.407139 ATCAGCCTTGGCTGGTTCTT 59.593 50.000 33.12 15.58 38.27 2.52
6424 10330 1.289160 TATCAGCCTTGGCTGGTTCT 58.711 50.000 33.12 20.63 38.27 3.01
6425 10331 2.355010 ATATCAGCCTTGGCTGGTTC 57.645 50.000 33.12 0.00 38.27 3.62
6426 10332 2.834638 AATATCAGCCTTGGCTGGTT 57.165 45.000 33.12 24.67 38.27 3.67
6427 10333 2.025037 TGAAATATCAGCCTTGGCTGGT 60.025 45.455 33.12 30.46 38.27 4.00
6428 10334 2.658285 TGAAATATCAGCCTTGGCTGG 58.342 47.619 33.12 19.10 38.27 4.85
6429 10335 4.340097 TCAATGAAATATCAGCCTTGGCTG 59.660 41.667 29.89 29.89 39.39 4.85
6430 10336 4.539726 TCAATGAAATATCAGCCTTGGCT 58.460 39.130 8.56 8.56 39.39 4.75
6431 10337 4.924305 TCAATGAAATATCAGCCTTGGC 57.076 40.909 2.97 2.97 39.39 4.52
6432 10338 9.472361 CTTAATTCAATGAAATATCAGCCTTGG 57.528 33.333 0.00 0.00 39.39 3.61
6433 10339 8.975439 GCTTAATTCAATGAAATATCAGCCTTG 58.025 33.333 0.00 0.00 39.39 3.61
6434 10340 8.698210 TGCTTAATTCAATGAAATATCAGCCTT 58.302 29.630 10.51 0.00 39.39 4.35
6435 10341 8.241497 TGCTTAATTCAATGAAATATCAGCCT 57.759 30.769 10.51 0.00 39.39 4.58
6436 10342 8.355169 TCTGCTTAATTCAATGAAATATCAGCC 58.645 33.333 10.51 0.00 39.39 4.85
6437 10343 9.395707 CTCTGCTTAATTCAATGAAATATCAGC 57.604 33.333 0.00 4.00 39.39 4.26
6440 10346 9.609950 GCTCTCTGCTTAATTCAATGAAATATC 57.390 33.333 0.00 0.00 38.95 1.63
6441 10347 9.128404 TGCTCTCTGCTTAATTCAATGAAATAT 57.872 29.630 0.00 0.00 43.37 1.28
6442 10348 8.510243 TGCTCTCTGCTTAATTCAATGAAATA 57.490 30.769 0.00 0.00 43.37 1.40
6443 10349 7.122353 ACTGCTCTCTGCTTAATTCAATGAAAT 59.878 33.333 0.00 0.00 43.37 2.17
6444 10350 6.432162 ACTGCTCTCTGCTTAATTCAATGAAA 59.568 34.615 0.00 0.00 43.37 2.69
6445 10351 5.942236 ACTGCTCTCTGCTTAATTCAATGAA 59.058 36.000 0.00 0.00 43.37 2.57
6446 10352 5.353400 CACTGCTCTCTGCTTAATTCAATGA 59.647 40.000 0.00 0.00 43.37 2.57
6447 10353 5.448768 CCACTGCTCTCTGCTTAATTCAATG 60.449 44.000 0.00 0.00 43.37 2.82
6448 10354 4.639310 CCACTGCTCTCTGCTTAATTCAAT 59.361 41.667 0.00 0.00 43.37 2.57
6449 10355 4.005650 CCACTGCTCTCTGCTTAATTCAA 58.994 43.478 0.00 0.00 43.37 2.69
6450 10356 3.261643 TCCACTGCTCTCTGCTTAATTCA 59.738 43.478 0.00 0.00 43.37 2.57
6451 10357 3.866651 TCCACTGCTCTCTGCTTAATTC 58.133 45.455 0.00 0.00 43.37 2.17
6452 10358 3.988976 TCCACTGCTCTCTGCTTAATT 57.011 42.857 0.00 0.00 43.37 1.40
6453 10359 3.988976 TTCCACTGCTCTCTGCTTAAT 57.011 42.857 0.00 0.00 43.37 1.40
6454 10360 3.769739 TTTCCACTGCTCTCTGCTTAA 57.230 42.857 0.00 0.00 43.37 1.85
6455 10361 3.769739 TTTTCCACTGCTCTCTGCTTA 57.230 42.857 0.00 0.00 43.37 3.09
6456 10362 2.645838 TTTTCCACTGCTCTCTGCTT 57.354 45.000 0.00 0.00 43.37 3.91
6457 10363 2.645838 TTTTTCCACTGCTCTCTGCT 57.354 45.000 0.00 0.00 43.37 4.24
6458 10364 2.816087 TCATTTTTCCACTGCTCTCTGC 59.184 45.455 0.00 0.00 43.25 4.26
6459 10365 3.817084 TGTCATTTTTCCACTGCTCTCTG 59.183 43.478 0.00 0.00 0.00 3.35
6460 10366 4.090761 TGTCATTTTTCCACTGCTCTCT 57.909 40.909 0.00 0.00 0.00 3.10
6461 10367 4.320788 CCTTGTCATTTTTCCACTGCTCTC 60.321 45.833 0.00 0.00 0.00 3.20
6462 10368 3.571401 CCTTGTCATTTTTCCACTGCTCT 59.429 43.478 0.00 0.00 0.00 4.09
6463 10369 3.305608 CCCTTGTCATTTTTCCACTGCTC 60.306 47.826 0.00 0.00 0.00 4.26
6464 10370 2.629617 CCCTTGTCATTTTTCCACTGCT 59.370 45.455 0.00 0.00 0.00 4.24
6465 10371 2.867647 GCCCTTGTCATTTTTCCACTGC 60.868 50.000 0.00 0.00 0.00 4.40
6466 10372 2.607771 CGCCCTTGTCATTTTTCCACTG 60.608 50.000 0.00 0.00 0.00 3.66
6467 10373 1.613437 CGCCCTTGTCATTTTTCCACT 59.387 47.619 0.00 0.00 0.00 4.00
6468 10374 1.611491 TCGCCCTTGTCATTTTTCCAC 59.389 47.619 0.00 0.00 0.00 4.02
6469 10375 1.885887 CTCGCCCTTGTCATTTTTCCA 59.114 47.619 0.00 0.00 0.00 3.53
6470 10376 1.202348 CCTCGCCCTTGTCATTTTTCC 59.798 52.381 0.00 0.00 0.00 3.13
6471 10377 2.159382 TCCTCGCCCTTGTCATTTTTC 58.841 47.619 0.00 0.00 0.00 2.29
6472 10378 2.286365 TCCTCGCCCTTGTCATTTTT 57.714 45.000 0.00 0.00 0.00 1.94
6473 10379 2.369394 GATCCTCGCCCTTGTCATTTT 58.631 47.619 0.00 0.00 0.00 1.82
6474 10380 1.408822 GGATCCTCGCCCTTGTCATTT 60.409 52.381 3.84 0.00 0.00 2.32
6475 10381 0.181350 GGATCCTCGCCCTTGTCATT 59.819 55.000 3.84 0.00 0.00 2.57
6476 10382 0.982852 TGGATCCTCGCCCTTGTCAT 60.983 55.000 14.23 0.00 0.00 3.06
6477 10383 1.198094 TTGGATCCTCGCCCTTGTCA 61.198 55.000 14.23 0.00 0.00 3.58
6478 10384 0.035439 TTTGGATCCTCGCCCTTGTC 60.035 55.000 14.23 0.00 0.00 3.18
6479 10385 0.035056 CTTTGGATCCTCGCCCTTGT 60.035 55.000 14.23 0.00 0.00 3.16
6480 10386 0.253044 TCTTTGGATCCTCGCCCTTG 59.747 55.000 14.23 0.00 0.00 3.61
6481 10387 1.141858 GATCTTTGGATCCTCGCCCTT 59.858 52.381 14.23 0.00 41.70 3.95
6482 10388 0.761802 GATCTTTGGATCCTCGCCCT 59.238 55.000 14.23 0.00 41.70 5.19
6483 10389 0.469917 TGATCTTTGGATCCTCGCCC 59.530 55.000 14.23 0.00 45.62 6.13
6484 10390 2.216898 CTTGATCTTTGGATCCTCGCC 58.783 52.381 14.23 0.00 45.62 5.54
6485 10391 2.158900 TCCTTGATCTTTGGATCCTCGC 60.159 50.000 14.23 0.00 45.62 5.03
6486 10392 3.827008 TCCTTGATCTTTGGATCCTCG 57.173 47.619 14.23 1.13 45.62 4.63
6487 10393 8.574737 CAATTTATCCTTGATCTTTGGATCCTC 58.425 37.037 14.23 1.82 45.62 3.71
6488 10394 8.284435 TCAATTTATCCTTGATCTTTGGATCCT 58.716 33.333 14.23 0.00 45.62 3.24
6489 10395 8.469309 TCAATTTATCCTTGATCTTTGGATCC 57.531 34.615 4.20 4.20 45.62 3.36
6490 10396 9.962783 CTTCAATTTATCCTTGATCTTTGGATC 57.037 33.333 14.73 0.00 46.20 3.36
6491 10397 9.705103 TCTTCAATTTATCCTTGATCTTTGGAT 57.295 29.630 15.34 15.34 42.55 3.41
6492 10398 9.705103 ATCTTCAATTTATCCTTGATCTTTGGA 57.295 29.630 0.00 0.00 32.94 3.53
6493 10399 9.745880 CATCTTCAATTTATCCTTGATCTTTGG 57.254 33.333 0.00 0.00 32.94 3.28
6508 10414 8.981647 CCGTTTTTCTTCATTCATCTTCAATTT 58.018 29.630 0.00 0.00 0.00 1.82
6509 10415 8.359642 TCCGTTTTTCTTCATTCATCTTCAATT 58.640 29.630 0.00 0.00 0.00 2.32
6510 10416 7.885297 TCCGTTTTTCTTCATTCATCTTCAAT 58.115 30.769 0.00 0.00 0.00 2.57
6511 10417 7.013274 ACTCCGTTTTTCTTCATTCATCTTCAA 59.987 33.333 0.00 0.00 0.00 2.69
6512 10418 6.486657 ACTCCGTTTTTCTTCATTCATCTTCA 59.513 34.615 0.00 0.00 0.00 3.02
6513 10419 6.798959 CACTCCGTTTTTCTTCATTCATCTTC 59.201 38.462 0.00 0.00 0.00 2.87
6514 10420 6.672147 CACTCCGTTTTTCTTCATTCATCTT 58.328 36.000 0.00 0.00 0.00 2.40
6515 10421 5.335191 GCACTCCGTTTTTCTTCATTCATCT 60.335 40.000 0.00 0.00 0.00 2.90
6516 10422 4.853743 GCACTCCGTTTTTCTTCATTCATC 59.146 41.667 0.00 0.00 0.00 2.92
6517 10423 4.321230 GGCACTCCGTTTTTCTTCATTCAT 60.321 41.667 0.00 0.00 0.00 2.57
6518 10424 3.004315 GGCACTCCGTTTTTCTTCATTCA 59.996 43.478 0.00 0.00 0.00 2.57
6519 10425 3.004315 TGGCACTCCGTTTTTCTTCATTC 59.996 43.478 0.00 0.00 34.14 2.67
6520 10426 2.955660 TGGCACTCCGTTTTTCTTCATT 59.044 40.909 0.00 0.00 34.14 2.57
6521 10427 2.582052 TGGCACTCCGTTTTTCTTCAT 58.418 42.857 0.00 0.00 34.14 2.57
6522 10428 2.045561 TGGCACTCCGTTTTTCTTCA 57.954 45.000 0.00 0.00 34.14 3.02
6523 10429 3.372060 CTTTGGCACTCCGTTTTTCTTC 58.628 45.455 0.00 0.00 34.14 2.87
6524 10430 2.100749 CCTTTGGCACTCCGTTTTTCTT 59.899 45.455 0.00 0.00 34.14 2.52
6525 10431 1.681264 CCTTTGGCACTCCGTTTTTCT 59.319 47.619 0.00 0.00 34.14 2.52
6526 10432 2.134201 CCTTTGGCACTCCGTTTTTC 57.866 50.000 0.00 0.00 34.14 2.29
6545 10451 0.868406 GATAGGCTAACGGCATGTGC 59.132 55.000 0.00 0.00 44.01 4.57
6546 10452 1.070758 AGGATAGGCTAACGGCATGTG 59.929 52.381 0.00 0.00 44.01 3.21
6547 10453 1.344763 GAGGATAGGCTAACGGCATGT 59.655 52.381 0.00 0.00 44.01 3.21
6548 10454 1.344438 TGAGGATAGGCTAACGGCATG 59.656 52.381 0.00 0.00 44.01 4.06
6549 10455 1.717032 TGAGGATAGGCTAACGGCAT 58.283 50.000 0.00 0.00 44.01 4.40
6550 10456 1.344438 CATGAGGATAGGCTAACGGCA 59.656 52.381 0.00 0.00 44.01 5.69
6551 10457 1.338200 CCATGAGGATAGGCTAACGGC 60.338 57.143 0.00 0.00 36.89 5.68
6552 10458 1.338200 GCCATGAGGATAGGCTAACGG 60.338 57.143 0.00 0.00 44.92 4.44
6553 10459 1.670087 CGCCATGAGGATAGGCTAACG 60.670 57.143 0.00 0.00 46.14 3.18
6554 10460 1.338200 CCGCCATGAGGATAGGCTAAC 60.338 57.143 0.00 0.00 46.14 2.34
6555 10461 0.976641 CCGCCATGAGGATAGGCTAA 59.023 55.000 0.00 0.00 46.14 3.09
6556 10462 0.904865 CCCGCCATGAGGATAGGCTA 60.905 60.000 8.51 0.00 46.14 3.93
6557 10463 2.219875 CCCGCCATGAGGATAGGCT 61.220 63.158 8.51 0.00 46.14 4.58
6558 10464 2.348998 CCCGCCATGAGGATAGGC 59.651 66.667 8.51 0.00 44.89 3.93
6559 10465 1.674057 GACCCGCCATGAGGATAGG 59.326 63.158 8.51 0.00 36.89 2.57
6560 10466 1.674057 GGACCCGCCATGAGGATAG 59.326 63.158 8.51 0.00 36.89 2.08
6561 10467 1.841556 GGGACCCGCCATGAGGATA 60.842 63.158 8.51 0.00 38.95 2.59
6562 10468 3.171388 GGGACCCGCCATGAGGAT 61.171 66.667 8.51 0.00 38.95 3.24
6579 10485 2.152016 GTTTCTTCAGAACCCCTTCGG 58.848 52.381 0.00 0.00 33.13 4.30
6580 10486 3.127425 AGTTTCTTCAGAACCCCTTCG 57.873 47.619 0.00 0.00 33.13 3.79
6581 10487 4.276183 GTCAAGTTTCTTCAGAACCCCTTC 59.724 45.833 0.00 0.00 33.13 3.46
6582 10488 4.207955 GTCAAGTTTCTTCAGAACCCCTT 58.792 43.478 0.00 0.00 33.13 3.95
6583 10489 3.744530 CGTCAAGTTTCTTCAGAACCCCT 60.745 47.826 0.00 0.00 33.13 4.79
6584 10490 2.548480 CGTCAAGTTTCTTCAGAACCCC 59.452 50.000 0.00 0.00 33.13 4.95
6585 10491 2.031944 GCGTCAAGTTTCTTCAGAACCC 60.032 50.000 0.00 0.00 33.13 4.11
6586 10492 2.031944 GGCGTCAAGTTTCTTCAGAACC 60.032 50.000 0.00 0.00 33.13 3.62
6587 10493 2.612212 TGGCGTCAAGTTTCTTCAGAAC 59.388 45.455 0.00 0.00 33.13 3.01
6588 10494 2.612212 GTGGCGTCAAGTTTCTTCAGAA 59.388 45.455 0.00 0.00 0.00 3.02
6589 10495 2.210116 GTGGCGTCAAGTTTCTTCAGA 58.790 47.619 0.00 0.00 0.00 3.27
6590 10496 1.939934 TGTGGCGTCAAGTTTCTTCAG 59.060 47.619 0.00 0.00 0.00 3.02
6591 10497 1.668751 GTGTGGCGTCAAGTTTCTTCA 59.331 47.619 0.00 0.00 0.00 3.02
6592 10498 1.940613 AGTGTGGCGTCAAGTTTCTTC 59.059 47.619 0.00 0.00 0.00 2.87
6593 10499 1.670811 CAGTGTGGCGTCAAGTTTCTT 59.329 47.619 0.00 0.00 0.00 2.52
6594 10500 1.299541 CAGTGTGGCGTCAAGTTTCT 58.700 50.000 0.00 0.00 0.00 2.52
6595 10501 0.317020 GCAGTGTGGCGTCAAGTTTC 60.317 55.000 0.00 0.00 0.00 2.78
6596 10502 0.748005 AGCAGTGTGGCGTCAAGTTT 60.748 50.000 0.00 0.00 39.27 2.66
6597 10503 1.153168 AGCAGTGTGGCGTCAAGTT 60.153 52.632 0.00 0.00 39.27 2.66
6598 10504 1.889105 CAGCAGTGTGGCGTCAAGT 60.889 57.895 0.00 0.00 39.27 3.16
6599 10505 2.941333 CAGCAGTGTGGCGTCAAG 59.059 61.111 0.00 0.00 39.27 3.02
6600 10506 3.279116 GCAGCAGTGTGGCGTCAA 61.279 61.111 0.00 0.00 39.27 3.18
6603 10509 3.252627 TATGGCAGCAGTGTGGCGT 62.253 57.895 14.90 14.90 45.86 5.68
6604 10510 2.436469 TATGGCAGCAGTGTGGCG 60.436 61.111 12.28 0.00 45.86 5.69
6605 10511 1.078214 TCTATGGCAGCAGTGTGGC 60.078 57.895 10.83 10.83 43.25 5.01
6606 10512 0.251354 AGTCTATGGCAGCAGTGTGG 59.749 55.000 0.00 0.00 0.00 4.17
6607 10513 1.066645 TCAGTCTATGGCAGCAGTGTG 60.067 52.381 0.00 0.00 0.00 3.82
6608 10514 1.206610 CTCAGTCTATGGCAGCAGTGT 59.793 52.381 0.00 0.00 0.00 3.55
6609 10515 1.479730 TCTCAGTCTATGGCAGCAGTG 59.520 52.381 0.00 0.00 0.00 3.66
6610 10516 1.857965 TCTCAGTCTATGGCAGCAGT 58.142 50.000 0.00 0.00 0.00 4.40
6611 10517 3.132160 CAATCTCAGTCTATGGCAGCAG 58.868 50.000 0.00 0.00 0.00 4.24
6612 10518 2.502947 ACAATCTCAGTCTATGGCAGCA 59.497 45.455 0.00 0.00 0.00 4.41
6613 10519 2.871022 CACAATCTCAGTCTATGGCAGC 59.129 50.000 0.00 0.00 0.00 5.25
6614 10520 2.871022 GCACAATCTCAGTCTATGGCAG 59.129 50.000 0.00 0.00 0.00 4.85
6615 10521 2.420547 GGCACAATCTCAGTCTATGGCA 60.421 50.000 0.00 0.00 0.00 4.92
6616 10522 2.216898 GGCACAATCTCAGTCTATGGC 58.783 52.381 0.00 0.00 0.00 4.40
6617 10523 2.477825 CGGCACAATCTCAGTCTATGG 58.522 52.381 0.00 0.00 0.00 2.74
6618 10524 2.101415 TCCGGCACAATCTCAGTCTATG 59.899 50.000 0.00 0.00 0.00 2.23
6619 10525 2.388735 TCCGGCACAATCTCAGTCTAT 58.611 47.619 0.00 0.00 0.00 1.98
6620 10526 1.847328 TCCGGCACAATCTCAGTCTA 58.153 50.000 0.00 0.00 0.00 2.59
6621 10527 1.198713 ATCCGGCACAATCTCAGTCT 58.801 50.000 0.00 0.00 0.00 3.24
6622 10528 1.667724 CAATCCGGCACAATCTCAGTC 59.332 52.381 0.00 0.00 0.00 3.51
6623 10529 1.003580 ACAATCCGGCACAATCTCAGT 59.996 47.619 0.00 0.00 0.00 3.41
6624 10530 1.399440 CACAATCCGGCACAATCTCAG 59.601 52.381 0.00 0.00 0.00 3.35
6625 10531 1.003003 TCACAATCCGGCACAATCTCA 59.997 47.619 0.00 0.00 0.00 3.27
6626 10532 1.667724 CTCACAATCCGGCACAATCTC 59.332 52.381 0.00 0.00 0.00 2.75
6627 10533 1.742761 CTCACAATCCGGCACAATCT 58.257 50.000 0.00 0.00 0.00 2.40
6628 10534 0.099436 GCTCACAATCCGGCACAATC 59.901 55.000 0.00 0.00 0.00 2.67
6629 10535 0.608856 TGCTCACAATCCGGCACAAT 60.609 50.000 0.00 0.00 0.00 2.71
6630 10536 1.228094 TGCTCACAATCCGGCACAA 60.228 52.632 0.00 0.00 0.00 3.33
6631 10537 1.672030 CTGCTCACAATCCGGCACA 60.672 57.895 0.00 0.00 0.00 4.57
6632 10538 3.044059 GCTGCTCACAATCCGGCAC 62.044 63.158 0.00 0.00 0.00 5.01
6633 10539 2.747460 GCTGCTCACAATCCGGCA 60.747 61.111 0.00 0.00 0.00 5.69
6634 10540 2.747460 TGCTGCTCACAATCCGGC 60.747 61.111 0.00 0.00 0.00 6.13
6635 10541 2.743752 CGTGCTGCTCACAATCCGG 61.744 63.158 0.00 0.00 45.92 5.14
6636 10542 1.959899 GACGTGCTGCTCACAATCCG 61.960 60.000 0.00 0.00 45.92 4.18
6637 10543 1.639298 GGACGTGCTGCTCACAATCC 61.639 60.000 0.00 10.62 45.92 3.01
6638 10544 0.950555 TGGACGTGCTGCTCACAATC 60.951 55.000 8.99 6.49 45.92 2.67
6639 10545 0.321919 ATGGACGTGCTGCTCACAAT 60.322 50.000 8.99 0.00 45.92 2.71
6640 10546 0.950555 GATGGACGTGCTGCTCACAA 60.951 55.000 8.99 0.00 45.92 3.33
6641 10547 1.374631 GATGGACGTGCTGCTCACA 60.375 57.895 8.99 0.00 45.92 3.58
6642 10548 1.374631 TGATGGACGTGCTGCTCAC 60.375 57.895 8.99 0.45 42.23 3.51
6643 10549 1.374631 GTGATGGACGTGCTGCTCA 60.375 57.895 8.99 6.06 0.00 4.26
6644 10550 1.357258 CTGTGATGGACGTGCTGCTC 61.357 60.000 8.99 3.38 0.00 4.26
6645 10551 1.375140 CTGTGATGGACGTGCTGCT 60.375 57.895 8.99 0.00 0.00 4.24
6646 10552 1.230635 AACTGTGATGGACGTGCTGC 61.231 55.000 8.99 0.40 0.00 5.25
6647 10553 0.514255 CAACTGTGATGGACGTGCTG 59.486 55.000 8.99 0.00 0.00 4.41
6648 10554 1.230635 GCAACTGTGATGGACGTGCT 61.231 55.000 8.99 0.00 0.00 4.40
6649 10555 1.207593 GCAACTGTGATGGACGTGC 59.792 57.895 0.00 0.00 0.00 5.34
6650 10556 1.868997 GGCAACTGTGATGGACGTG 59.131 57.895 0.00 0.00 0.00 4.49
6651 10557 4.379174 GGCAACTGTGATGGACGT 57.621 55.556 0.00 0.00 0.00 4.34
6663 10569 0.827507 TTCAGGGCAAAGGAGGCAAC 60.828 55.000 0.00 0.00 35.46 4.17
6664 10570 0.105760 TTTCAGGGCAAAGGAGGCAA 60.106 50.000 0.00 0.00 35.46 4.52
6665 10571 0.105760 TTTTCAGGGCAAAGGAGGCA 60.106 50.000 0.00 0.00 35.46 4.75
6666 10572 1.066645 CATTTTCAGGGCAAAGGAGGC 60.067 52.381 0.00 0.00 0.00 4.70
6667 10573 1.066645 GCATTTTCAGGGCAAAGGAGG 60.067 52.381 0.00 0.00 0.00 4.30
6668 10574 1.619827 TGCATTTTCAGGGCAAAGGAG 59.380 47.619 0.00 0.00 34.05 3.69
6669 10575 1.619827 CTGCATTTTCAGGGCAAAGGA 59.380 47.619 0.00 0.00 37.06 3.36
6670 10576 1.345415 ACTGCATTTTCAGGGCAAAGG 59.655 47.619 0.00 0.00 38.36 3.11
6671 10577 2.036217 TCACTGCATTTTCAGGGCAAAG 59.964 45.455 0.00 0.00 37.41 2.77
6672 10578 2.037901 TCACTGCATTTTCAGGGCAAA 58.962 42.857 0.00 0.00 37.41 3.68
6673 10579 1.702182 TCACTGCATTTTCAGGGCAA 58.298 45.000 0.00 0.00 37.41 4.52
6674 10580 1.927487 ATCACTGCATTTTCAGGGCA 58.073 45.000 0.00 0.00 37.41 5.36
6675 10581 2.613691 CAATCACTGCATTTTCAGGGC 58.386 47.619 0.00 0.00 37.41 5.19
6687 10593 0.592637 TGGCAAGAACGCAATCACTG 59.407 50.000 0.00 0.00 0.00 3.66
6688 10594 1.538047 ATGGCAAGAACGCAATCACT 58.462 45.000 0.00 0.00 0.00 3.41
6689 10595 3.698029 ATATGGCAAGAACGCAATCAC 57.302 42.857 0.00 0.00 0.00 3.06
6690 10596 4.439974 GGAAATATGGCAAGAACGCAATCA 60.440 41.667 0.00 0.00 0.00 2.57
6691 10597 4.044426 GGAAATATGGCAAGAACGCAATC 58.956 43.478 0.00 0.00 0.00 2.67
6692 10598 3.181476 GGGAAATATGGCAAGAACGCAAT 60.181 43.478 0.00 0.00 0.00 3.56
6693 10599 2.165437 GGGAAATATGGCAAGAACGCAA 59.835 45.455 0.00 0.00 0.00 4.85
6694 10600 1.748493 GGGAAATATGGCAAGAACGCA 59.252 47.619 0.00 0.00 0.00 5.24
6695 10601 1.748493 TGGGAAATATGGCAAGAACGC 59.252 47.619 0.00 0.00 0.00 4.84
6696 10602 4.216257 CCTATGGGAAATATGGCAAGAACG 59.784 45.833 0.00 0.00 33.58 3.95
6697 10603 5.712152 CCTATGGGAAATATGGCAAGAAC 57.288 43.478 0.00 0.00 33.58 3.01
6713 10619 1.302033 GACGATGCTGGCCCTATGG 60.302 63.158 0.00 0.00 0.00 2.74
6714 10620 0.602106 CTGACGATGCTGGCCCTATG 60.602 60.000 0.00 0.00 0.00 2.23
6715 10621 1.750930 CTGACGATGCTGGCCCTAT 59.249 57.895 0.00 0.00 0.00 2.57
6716 10622 2.434843 CCTGACGATGCTGGCCCTA 61.435 63.158 0.00 0.00 0.00 3.53
6717 10623 3.790437 CCTGACGATGCTGGCCCT 61.790 66.667 0.00 0.00 0.00 5.19
6718 10624 4.864334 CCCTGACGATGCTGGCCC 62.864 72.222 0.00 0.00 0.00 5.80
6719 10625 2.615227 AATCCCTGACGATGCTGGCC 62.615 60.000 0.00 0.00 0.00 5.36
6720 10626 0.749454 AAATCCCTGACGATGCTGGC 60.749 55.000 0.00 0.00 0.00 4.85
6721 10627 2.620251 TAAATCCCTGACGATGCTGG 57.380 50.000 0.00 0.00 0.00 4.85
6722 10628 4.023707 GGAATTAAATCCCTGACGATGCTG 60.024 45.833 0.00 0.00 33.05 4.41
6723 10629 4.137543 GGAATTAAATCCCTGACGATGCT 58.862 43.478 0.00 0.00 33.05 3.79
6724 10630 4.137543 AGGAATTAAATCCCTGACGATGC 58.862 43.478 5.92 0.00 40.59 3.91
6725 10631 6.238759 GGAAAGGAATTAAATCCCTGACGATG 60.239 42.308 5.92 0.00 40.59 3.84
6726 10632 5.828328 GGAAAGGAATTAAATCCCTGACGAT 59.172 40.000 5.92 0.00 40.59 3.73
6727 10633 5.045140 AGGAAAGGAATTAAATCCCTGACGA 60.045 40.000 5.92 0.00 40.59 4.20
6728 10634 5.066505 CAGGAAAGGAATTAAATCCCTGACG 59.933 44.000 5.92 0.00 40.59 4.35
6729 10635 5.360999 CCAGGAAAGGAATTAAATCCCTGAC 59.639 44.000 12.59 1.12 40.59 3.51
6730 10636 5.016245 ACCAGGAAAGGAATTAAATCCCTGA 59.984 40.000 12.59 0.00 40.59 3.86
6731 10637 5.272402 ACCAGGAAAGGAATTAAATCCCTG 58.728 41.667 5.92 6.31 40.59 4.45
6732 10638 5.552430 ACCAGGAAAGGAATTAAATCCCT 57.448 39.130 5.92 0.00 40.59 4.20
6733 10639 5.597182 GGTACCAGGAAAGGAATTAAATCCC 59.403 44.000 7.15 0.00 40.59 3.85
6734 10640 6.710597 GGTACCAGGAAAGGAATTAAATCC 57.289 41.667 7.15 0.84 39.96 3.01
6762 10668 3.566853 AATGATCACGGCTGCGCG 61.567 61.111 0.00 0.00 0.00 6.86
6763 10669 2.023741 CAATGATCACGGCTGCGC 59.976 61.111 0.00 0.00 0.00 6.09
6764 10670 1.349627 GTCAATGATCACGGCTGCG 59.650 57.895 0.00 0.00 0.00 5.18
6765 10671 1.349627 CGTCAATGATCACGGCTGC 59.650 57.895 0.00 0.00 32.19 5.25
6766 10672 1.349627 GCGTCAATGATCACGGCTG 59.650 57.895 0.00 0.00 36.50 4.85
6767 10673 3.799753 GCGTCAATGATCACGGCT 58.200 55.556 0.00 0.00 36.50 5.52
6769 10675 0.583438 GATGGCGTCAATGATCACGG 59.417 55.000 0.00 0.00 36.50 4.94
6770 10676 1.575244 AGATGGCGTCAATGATCACG 58.425 50.000 9.78 0.00 39.09 4.35
6771 10677 3.201290 AGAAGATGGCGTCAATGATCAC 58.799 45.455 9.78 0.00 0.00 3.06
6772 10678 3.461061 GAGAAGATGGCGTCAATGATCA 58.539 45.455 9.78 0.00 0.00 2.92
6773 10679 2.805099 GGAGAAGATGGCGTCAATGATC 59.195 50.000 9.78 0.00 0.00 2.92
6774 10680 2.171237 TGGAGAAGATGGCGTCAATGAT 59.829 45.455 9.78 0.00 0.00 2.45
6775 10681 1.554617 TGGAGAAGATGGCGTCAATGA 59.445 47.619 9.78 0.00 0.00 2.57
6776 10682 1.938577 CTGGAGAAGATGGCGTCAATG 59.061 52.381 9.78 0.00 0.00 2.82
6777 10683 1.745141 GCTGGAGAAGATGGCGTCAAT 60.745 52.381 9.78 0.00 0.00 2.57
6778 10684 0.391661 GCTGGAGAAGATGGCGTCAA 60.392 55.000 9.78 0.00 0.00 3.18
6779 10685 1.219124 GCTGGAGAAGATGGCGTCA 59.781 57.895 9.78 0.00 0.00 4.35
6780 10686 1.880340 CGCTGGAGAAGATGGCGTC 60.880 63.158 0.00 0.00 40.78 5.19
6781 10687 2.185350 CGCTGGAGAAGATGGCGT 59.815 61.111 0.00 0.00 40.78 5.68
6782 10688 1.591059 CTCGCTGGAGAAGATGGCG 60.591 63.158 0.00 0.00 43.27 5.69
6783 10689 1.886777 GCTCGCTGGAGAAGATGGC 60.887 63.158 0.00 0.00 43.27 4.40
6784 10690 0.530211 CAGCTCGCTGGAGAAGATGG 60.530 60.000 10.98 0.00 43.27 3.51
6785 10691 2.974845 CAGCTCGCTGGAGAAGATG 58.025 57.895 10.98 0.00 43.27 2.90
6800 10706 1.303561 TTGGATCCACAGCACCAGC 60.304 57.895 15.91 0.00 42.56 4.85
6801 10707 0.037303 ACTTGGATCCACAGCACCAG 59.963 55.000 15.91 9.98 33.85 4.00
6802 10708 0.478072 AACTTGGATCCACAGCACCA 59.522 50.000 15.91 0.00 0.00 4.17
6803 10709 0.883833 CAACTTGGATCCACAGCACC 59.116 55.000 15.91 0.00 0.00 5.01
6804 10710 1.537202 GACAACTTGGATCCACAGCAC 59.463 52.381 15.91 1.04 0.00 4.40
6805 10711 1.421268 AGACAACTTGGATCCACAGCA 59.579 47.619 15.91 0.00 0.00 4.41
6806 10712 1.808945 CAGACAACTTGGATCCACAGC 59.191 52.381 15.91 0.96 0.00 4.40
6807 10713 1.808945 GCAGACAACTTGGATCCACAG 59.191 52.381 15.91 16.87 0.00 3.66
6808 10714 1.421268 AGCAGACAACTTGGATCCACA 59.579 47.619 15.91 5.18 0.00 4.17
6809 10715 2.079925 GAGCAGACAACTTGGATCCAC 58.920 52.381 15.91 1.12 0.00 4.02
6810 10716 1.338105 CGAGCAGACAACTTGGATCCA 60.338 52.381 11.44 11.44 0.00 3.41
6811 10717 1.066858 TCGAGCAGACAACTTGGATCC 60.067 52.381 4.20 4.20 0.00 3.36
6812 10718 2.370281 TCGAGCAGACAACTTGGATC 57.630 50.000 0.00 0.00 0.00 3.36
6813 10719 2.839486 TTCGAGCAGACAACTTGGAT 57.161 45.000 0.00 0.00 0.00 3.41
6814 10720 2.612212 GTTTTCGAGCAGACAACTTGGA 59.388 45.455 4.61 0.00 36.78 3.53
6815 10721 2.354510 TGTTTTCGAGCAGACAACTTGG 59.645 45.455 10.92 0.00 39.57 3.61
6816 10722 3.673746 TGTTTTCGAGCAGACAACTTG 57.326 42.857 10.92 0.00 39.57 3.16
6817 10723 3.003689 CCATGTTTTCGAGCAGACAACTT 59.996 43.478 10.92 4.24 39.57 2.66
6818 10724 2.549754 CCATGTTTTCGAGCAGACAACT 59.450 45.455 10.92 0.00 39.57 3.16
6819 10725 2.918131 GCCATGTTTTCGAGCAGACAAC 60.918 50.000 4.83 4.83 39.36 3.32
6820 10726 1.266718 GCCATGTTTTCGAGCAGACAA 59.733 47.619 0.00 0.00 0.00 3.18
6821 10727 0.874390 GCCATGTTTTCGAGCAGACA 59.126 50.000 0.00 0.00 0.00 3.41
6822 10728 0.874390 TGCCATGTTTTCGAGCAGAC 59.126 50.000 0.00 0.00 0.00 3.51
6823 10729 1.603456 TTGCCATGTTTTCGAGCAGA 58.397 45.000 0.00 0.00 34.45 4.26
6824 10730 2.256174 CATTGCCATGTTTTCGAGCAG 58.744 47.619 0.00 0.00 34.45 4.24
6825 10731 1.612950 ACATTGCCATGTTTTCGAGCA 59.387 42.857 0.00 0.00 41.16 4.26
6826 10732 2.352503 ACATTGCCATGTTTTCGAGC 57.647 45.000 0.00 0.00 41.16 5.03
6844 10750 2.235546 GAACTGTCGACCTGGCAAC 58.764 57.895 14.12 0.00 0.00 4.17
6845 10751 4.771127 GAACTGTCGACCTGGCAA 57.229 55.556 14.12 0.00 0.00 4.52
6855 10761 2.432628 CGTCTGGGCCGAACTGTC 60.433 66.667 0.00 0.00 0.00 3.51
6856 10762 4.003788 CCGTCTGGGCCGAACTGT 62.004 66.667 0.00 0.00 0.00 3.55
6857 10763 3.934391 GACCGTCTGGGCCGAACTG 62.934 68.421 0.00 0.00 37.27 3.16
6858 10764 3.692406 GACCGTCTGGGCCGAACT 61.692 66.667 0.00 0.00 37.27 3.01
6871 10777 0.670546 ATGCAACTTCACGAGGACCG 60.671 55.000 0.00 0.00 45.44 4.79
6872 10778 1.197721 CAATGCAACTTCACGAGGACC 59.802 52.381 0.00 0.00 0.00 4.46
6873 10779 1.400242 GCAATGCAACTTCACGAGGAC 60.400 52.381 0.00 0.00 0.00 3.85
6874 10780 0.874390 GCAATGCAACTTCACGAGGA 59.126 50.000 0.00 0.00 0.00 3.71
6875 10781 0.109597 GGCAATGCAACTTCACGAGG 60.110 55.000 7.79 0.00 0.00 4.63
6876 10782 0.592637 TGGCAATGCAACTTCACGAG 59.407 50.000 7.79 0.00 0.00 4.18
6877 10783 0.592637 CTGGCAATGCAACTTCACGA 59.407 50.000 7.79 0.00 0.00 4.35
6878 10784 0.592637 TCTGGCAATGCAACTTCACG 59.407 50.000 7.79 0.00 0.00 4.35
6879 10785 2.223782 TGTTCTGGCAATGCAACTTCAC 60.224 45.455 7.79 0.00 0.00 3.18
6880 10786 2.030371 TGTTCTGGCAATGCAACTTCA 58.970 42.857 7.79 0.00 0.00 3.02
6881 10787 2.608752 CCTGTTCTGGCAATGCAACTTC 60.609 50.000 7.79 0.00 0.00 3.01
6882 10788 1.342174 CCTGTTCTGGCAATGCAACTT 59.658 47.619 7.79 0.00 0.00 2.66
6883 10789 0.963962 CCTGTTCTGGCAATGCAACT 59.036 50.000 7.79 0.00 0.00 3.16
6884 10790 0.675633 ACCTGTTCTGGCAATGCAAC 59.324 50.000 7.79 3.65 0.00 4.17
6885 10791 0.675083 CACCTGTTCTGGCAATGCAA 59.325 50.000 7.79 0.00 0.00 4.08
6886 10792 1.808531 GCACCTGTTCTGGCAATGCA 61.809 55.000 7.79 0.00 33.35 3.96
6887 10793 1.080298 GCACCTGTTCTGGCAATGC 60.080 57.895 0.00 0.00 0.00 3.56
6888 10794 0.524862 GAGCACCTGTTCTGGCAATG 59.475 55.000 0.00 0.00 0.00 2.82
6889 10795 0.957395 CGAGCACCTGTTCTGGCAAT 60.957 55.000 0.00 0.00 0.00 3.56
6890 10796 1.597854 CGAGCACCTGTTCTGGCAA 60.598 57.895 0.00 0.00 0.00 4.52
6891 10797 2.031012 CGAGCACCTGTTCTGGCA 59.969 61.111 0.00 0.00 0.00 4.92
6892 10798 2.743928 CCGAGCACCTGTTCTGGC 60.744 66.667 0.00 0.00 0.00 4.85
6893 10799 1.079543 CTCCGAGCACCTGTTCTGG 60.080 63.158 0.00 0.00 0.00 3.86
6894 10800 1.739562 GCTCCGAGCACCTGTTCTG 60.740 63.158 15.78 0.00 41.89 3.02
6895 10801 1.882989 GAGCTCCGAGCACCTGTTCT 61.883 60.000 22.29 0.00 45.56 3.01
6896 10802 1.446966 GAGCTCCGAGCACCTGTTC 60.447 63.158 22.29 6.25 45.56 3.18
6897 10803 1.882989 GAGAGCTCCGAGCACCTGTT 61.883 60.000 22.29 0.00 45.56 3.16
6898 10804 2.283532 AGAGCTCCGAGCACCTGT 60.284 61.111 22.29 0.61 45.56 4.00
6899 10805 1.881903 TTGAGAGCTCCGAGCACCTG 61.882 60.000 22.29 0.00 45.56 4.00
6900 10806 1.603236 CTTGAGAGCTCCGAGCACCT 61.603 60.000 22.29 17.30 45.56 4.00
6901 10807 1.153667 CTTGAGAGCTCCGAGCACC 60.154 63.158 22.29 13.03 45.56 5.01
6902 10808 1.153667 CCTTGAGAGCTCCGAGCAC 60.154 63.158 22.29 15.99 45.56 4.40
6903 10809 1.188219 AACCTTGAGAGCTCCGAGCA 61.188 55.000 22.29 0.78 45.56 4.26
6904 10810 0.459411 GAACCTTGAGAGCTCCGAGC 60.459 60.000 12.80 12.80 42.84 5.03
6905 10811 0.174617 GGAACCTTGAGAGCTCCGAG 59.825 60.000 10.93 10.88 0.00 4.63
6906 10812 1.595993 CGGAACCTTGAGAGCTCCGA 61.596 60.000 10.93 0.90 43.84 4.55
6907 10813 1.153745 CGGAACCTTGAGAGCTCCG 60.154 63.158 10.93 0.00 39.17 4.63
6908 10814 1.448717 GCGGAACCTTGAGAGCTCC 60.449 63.158 10.93 2.40 0.00 4.70
6909 10815 1.807573 CGCGGAACCTTGAGAGCTC 60.808 63.158 5.27 5.27 0.00 4.09
6910 10816 2.262915 CGCGGAACCTTGAGAGCT 59.737 61.111 0.00 0.00 0.00 4.09
6911 10817 2.815647 CCGCGGAACCTTGAGAGC 60.816 66.667 24.07 0.00 0.00 4.09
6912 10818 2.125512 CCCGCGGAACCTTGAGAG 60.126 66.667 30.73 0.44 0.00 3.20
6913 10819 4.388499 GCCCGCGGAACCTTGAGA 62.388 66.667 30.73 0.00 0.00 3.27
6914 10820 2.587322 TATGCCCGCGGAACCTTGAG 62.587 60.000 30.73 8.26 0.00 3.02
6915 10821 2.587322 CTATGCCCGCGGAACCTTGA 62.587 60.000 30.73 2.19 0.00 3.02
6916 10822 2.124901 TATGCCCGCGGAACCTTG 60.125 61.111 30.73 10.02 0.00 3.61
6917 10823 2.189521 CTATGCCCGCGGAACCTT 59.810 61.111 30.73 14.60 0.00 3.50
6918 10824 2.666098 AACTATGCCCGCGGAACCT 61.666 57.895 30.73 13.89 0.00 3.50
6919 10825 2.124860 AACTATGCCCGCGGAACC 60.125 61.111 30.73 15.22 0.00 3.62
6920 10826 1.448893 TCAACTATGCCCGCGGAAC 60.449 57.895 30.73 19.45 0.00 3.62
6921 10827 1.448893 GTCAACTATGCCCGCGGAA 60.449 57.895 30.73 15.75 0.00 4.30
6922 10828 2.185867 GTCAACTATGCCCGCGGA 59.814 61.111 30.73 8.21 0.00 5.54
6923 10829 2.125310 TGTCAACTATGCCCGCGG 60.125 61.111 21.04 21.04 0.00 6.46
6924 10830 1.153647 TCTGTCAACTATGCCCGCG 60.154 57.895 0.00 0.00 0.00 6.46
6925 10831 4.932789 TCTGTCAACTATGCCCGC 57.067 55.556 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.