Multiple sequence alignment - TraesCS5A01G248500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G248500 | chr5A | 100.000 | 2586 | 0 | 0 | 1 | 2586 | 462806868 | 462809453 | 0.000000e+00 | 4776.0 |
1 | TraesCS5A01G248500 | chr5A | 94.715 | 738 | 35 | 3 | 1849 | 2586 | 411880792 | 411880059 | 0.000000e+00 | 1144.0 |
2 | TraesCS5A01G248500 | chr7A | 95.109 | 736 | 32 | 3 | 1853 | 2586 | 20023005 | 20023738 | 0.000000e+00 | 1157.0 |
3 | TraesCS5A01G248500 | chr7A | 94.602 | 741 | 32 | 5 | 1846 | 2586 | 217948047 | 217947315 | 0.000000e+00 | 1140.0 |
4 | TraesCS5A01G248500 | chr7A | 94.324 | 740 | 37 | 2 | 1847 | 2586 | 55368757 | 55368023 | 0.000000e+00 | 1129.0 |
5 | TraesCS5A01G248500 | chr3A | 94.602 | 741 | 38 | 2 | 1847 | 2586 | 538023549 | 538022810 | 0.000000e+00 | 1146.0 |
6 | TraesCS5A01G248500 | chr2A | 94.715 | 738 | 37 | 2 | 1849 | 2586 | 59003305 | 59004040 | 0.000000e+00 | 1146.0 |
7 | TraesCS5A01G248500 | chr2A | 94.715 | 738 | 37 | 2 | 1849 | 2586 | 69264083 | 69263348 | 0.000000e+00 | 1146.0 |
8 | TraesCS5A01G248500 | chr2A | 94.385 | 748 | 38 | 3 | 1839 | 2586 | 160011845 | 160012588 | 0.000000e+00 | 1146.0 |
9 | TraesCS5A01G248500 | chr4A | 94.437 | 737 | 37 | 3 | 1850 | 2586 | 640204712 | 640203980 | 0.000000e+00 | 1131.0 |
10 | TraesCS5A01G248500 | chr5B | 92.431 | 436 | 19 | 2 | 1242 | 1663 | 427823236 | 427823671 | 6.120000e-171 | 610.0 |
11 | TraesCS5A01G248500 | chr5B | 89.796 | 392 | 26 | 7 | 800 | 1188 | 427822752 | 427823132 | 8.320000e-135 | 490.0 |
12 | TraesCS5A01G248500 | chr5B | 79.580 | 333 | 60 | 6 | 1256 | 1584 | 427840174 | 427840502 | 5.570000e-57 | 231.0 |
13 | TraesCS5A01G248500 | chr5B | 100.000 | 28 | 0 | 0 | 1825 | 1852 | 427823844 | 427823871 | 5.000000e-03 | 52.8 |
14 | TraesCS5A01G248500 | chr5D | 93.062 | 418 | 11 | 3 | 1244 | 1661 | 361965232 | 361965631 | 1.710000e-166 | 595.0 |
15 | TraesCS5A01G248500 | chr5D | 92.211 | 398 | 26 | 4 | 791 | 1188 | 361964741 | 361965133 | 2.250000e-155 | 558.0 |
16 | TraesCS5A01G248500 | chr5D | 94.915 | 295 | 15 | 0 | 1 | 295 | 361964092 | 361964386 | 1.810000e-126 | 462.0 |
17 | TraesCS5A01G248500 | chr5D | 83.387 | 313 | 42 | 6 | 1257 | 1564 | 362038135 | 362038442 | 5.450000e-72 | 281.0 |
18 | TraesCS5A01G248500 | chr5D | 77.778 | 333 | 66 | 6 | 1256 | 1584 | 362007812 | 362008140 | 5.640000e-47 | 198.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5A01G248500 | chr5A | 462806868 | 462809453 | 2585 | False | 4776.000000 | 4776 | 100.000000 | 1 | 2586 | 1 | chr5A.!!$F1 | 2585 |
1 | TraesCS5A01G248500 | chr5A | 411880059 | 411880792 | 733 | True | 1144.000000 | 1144 | 94.715000 | 1849 | 2586 | 1 | chr5A.!!$R1 | 737 |
2 | TraesCS5A01G248500 | chr7A | 20023005 | 20023738 | 733 | False | 1157.000000 | 1157 | 95.109000 | 1853 | 2586 | 1 | chr7A.!!$F1 | 733 |
3 | TraesCS5A01G248500 | chr7A | 217947315 | 217948047 | 732 | True | 1140.000000 | 1140 | 94.602000 | 1846 | 2586 | 1 | chr7A.!!$R2 | 740 |
4 | TraesCS5A01G248500 | chr7A | 55368023 | 55368757 | 734 | True | 1129.000000 | 1129 | 94.324000 | 1847 | 2586 | 1 | chr7A.!!$R1 | 739 |
5 | TraesCS5A01G248500 | chr3A | 538022810 | 538023549 | 739 | True | 1146.000000 | 1146 | 94.602000 | 1847 | 2586 | 1 | chr3A.!!$R1 | 739 |
6 | TraesCS5A01G248500 | chr2A | 59003305 | 59004040 | 735 | False | 1146.000000 | 1146 | 94.715000 | 1849 | 2586 | 1 | chr2A.!!$F1 | 737 |
7 | TraesCS5A01G248500 | chr2A | 69263348 | 69264083 | 735 | True | 1146.000000 | 1146 | 94.715000 | 1849 | 2586 | 1 | chr2A.!!$R1 | 737 |
8 | TraesCS5A01G248500 | chr2A | 160011845 | 160012588 | 743 | False | 1146.000000 | 1146 | 94.385000 | 1839 | 2586 | 1 | chr2A.!!$F2 | 747 |
9 | TraesCS5A01G248500 | chr4A | 640203980 | 640204712 | 732 | True | 1131.000000 | 1131 | 94.437000 | 1850 | 2586 | 1 | chr4A.!!$R1 | 736 |
10 | TraesCS5A01G248500 | chr5B | 427822752 | 427823871 | 1119 | False | 384.266667 | 610 | 94.075667 | 800 | 1852 | 3 | chr5B.!!$F2 | 1052 |
11 | TraesCS5A01G248500 | chr5D | 361964092 | 361965631 | 1539 | False | 538.333333 | 595 | 93.396000 | 1 | 1661 | 3 | chr5D.!!$F3 | 1660 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
709 | 1018 | 0.030603 | AGAGAGAAGGGATGGGGGAC | 60.031 | 60.0 | 0.0 | 0.0 | 0.0 | 4.46 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2214 | 2657 | 0.987294 | CTCATTGAGGAGTGGTGGGT | 59.013 | 55.0 | 5.73 | 0.0 | 0.0 | 4.51 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
18 | 19 | 2.162716 | CCCTCCTTTTGCGTTCTCG | 58.837 | 57.895 | 0.00 | 0.00 | 40.37 | 4.04 |
62 | 63 | 2.094597 | TCGATCATTTGCCCAAAAGCTG | 60.095 | 45.455 | 0.00 | 0.00 | 33.56 | 4.24 |
81 | 82 | 3.705604 | CTGGCAGAAAATTCACACGTTT | 58.294 | 40.909 | 9.42 | 0.00 | 0.00 | 3.60 |
83 | 84 | 3.129462 | TGGCAGAAAATTCACACGTTTCA | 59.871 | 39.130 | 0.00 | 0.00 | 34.40 | 2.69 |
92 | 93 | 3.637998 | TCACACGTTTCAGTCCTAGAC | 57.362 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
123 | 124 | 0.539051 | ACTGCTATGTGAGTGAGGCC | 59.461 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
157 | 158 | 1.279840 | GCGGAAATGATACTGCGCC | 59.720 | 57.895 | 4.18 | 0.00 | 45.33 | 6.53 |
247 | 248 | 1.060729 | TCCATTCCCTTCACGGTTCA | 58.939 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
251 | 252 | 0.531090 | TTCCCTTCACGGTTCACACG | 60.531 | 55.000 | 0.00 | 0.00 | 37.36 | 4.49 |
253 | 254 | 1.594293 | CCTTCACGGTTCACACGCT | 60.594 | 57.895 | 0.00 | 0.00 | 34.00 | 5.07 |
288 | 289 | 3.521524 | AGCATTTTGTCGACGAGAAAC | 57.478 | 42.857 | 18.57 | 8.70 | 0.00 | 2.78 |
295 | 296 | 4.443913 | TTGTCGACGAGAAACCATATCA | 57.556 | 40.909 | 11.62 | 0.00 | 0.00 | 2.15 |
296 | 297 | 4.028852 | TGTCGACGAGAAACCATATCAG | 57.971 | 45.455 | 11.62 | 0.00 | 0.00 | 2.90 |
297 | 298 | 2.789893 | GTCGACGAGAAACCATATCAGC | 59.210 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
298 | 299 | 1.781429 | CGACGAGAAACCATATCAGCG | 59.219 | 52.381 | 0.00 | 0.00 | 0.00 | 5.18 |
305 | 614 | 3.947834 | AGAAACCATATCAGCGAAAAGGG | 59.052 | 43.478 | 0.00 | 0.00 | 0.00 | 3.95 |
307 | 616 | 3.199880 | ACCATATCAGCGAAAAGGGAG | 57.800 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
314 | 623 | 0.603975 | AGCGAAAAGGGAGCTGTCAC | 60.604 | 55.000 | 0.00 | 0.00 | 40.07 | 3.67 |
315 | 624 | 1.578206 | GCGAAAAGGGAGCTGTCACC | 61.578 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
328 | 637 | 0.830444 | TGTCACCGGCTACTGGTTCT | 60.830 | 55.000 | 0.00 | 0.00 | 37.72 | 3.01 |
333 | 642 | 1.697982 | ACCGGCTACTGGTTCTTTCTT | 59.302 | 47.619 | 0.00 | 0.00 | 35.82 | 2.52 |
341 | 650 | 7.468220 | CGGCTACTGGTTCTTTCTTTAAACTTT | 60.468 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
342 | 651 | 8.843262 | GGCTACTGGTTCTTTCTTTAAACTTTA | 58.157 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
364 | 673 | 9.779237 | CTTTATACTTAGATAATTGTTCGTGCG | 57.221 | 33.333 | 0.00 | 0.00 | 0.00 | 5.34 |
365 | 674 | 8.861033 | TTATACTTAGATAATTGTTCGTGCGT | 57.139 | 30.769 | 0.00 | 0.00 | 0.00 | 5.24 |
366 | 675 | 7.766219 | ATACTTAGATAATTGTTCGTGCGTT | 57.234 | 32.000 | 0.00 | 0.00 | 0.00 | 4.84 |
367 | 676 | 6.091123 | ACTTAGATAATTGTTCGTGCGTTC | 57.909 | 37.500 | 0.00 | 0.00 | 0.00 | 3.95 |
368 | 677 | 5.063060 | ACTTAGATAATTGTTCGTGCGTTCC | 59.937 | 40.000 | 0.00 | 0.00 | 0.00 | 3.62 |
369 | 678 | 3.331150 | AGATAATTGTTCGTGCGTTCCA | 58.669 | 40.909 | 0.00 | 0.00 | 0.00 | 3.53 |
370 | 679 | 3.749088 | AGATAATTGTTCGTGCGTTCCAA | 59.251 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
371 | 680 | 2.113910 | AATTGTTCGTGCGTTCCAAC | 57.886 | 45.000 | 0.00 | 0.00 | 0.00 | 3.77 |
372 | 681 | 1.018148 | ATTGTTCGTGCGTTCCAACA | 58.982 | 45.000 | 0.00 | 0.00 | 0.00 | 3.33 |
373 | 682 | 1.018148 | TTGTTCGTGCGTTCCAACAT | 58.982 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
374 | 683 | 0.306228 | TGTTCGTGCGTTCCAACATG | 59.694 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
375 | 684 | 0.584396 | GTTCGTGCGTTCCAACATGA | 59.416 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
376 | 685 | 0.865111 | TTCGTGCGTTCCAACATGAG | 59.135 | 50.000 | 0.00 | 0.00 | 33.57 | 2.90 |
377 | 686 | 1.154413 | CGTGCGTTCCAACATGAGC | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 4.26 |
378 | 687 | 1.840630 | CGTGCGTTCCAACATGAGCA | 61.841 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
379 | 688 | 0.523072 | GTGCGTTCCAACATGAGCAT | 59.477 | 50.000 | 0.00 | 0.00 | 36.96 | 3.79 |
380 | 689 | 1.737236 | GTGCGTTCCAACATGAGCATA | 59.263 | 47.619 | 0.00 | 0.00 | 36.96 | 3.14 |
381 | 690 | 2.009051 | TGCGTTCCAACATGAGCATAG | 58.991 | 47.619 | 0.00 | 0.00 | 0.00 | 2.23 |
382 | 691 | 2.279741 | GCGTTCCAACATGAGCATAGA | 58.720 | 47.619 | 0.00 | 0.00 | 0.00 | 1.98 |
383 | 692 | 2.030946 | GCGTTCCAACATGAGCATAGAC | 59.969 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
384 | 693 | 3.261580 | CGTTCCAACATGAGCATAGACA | 58.738 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
385 | 694 | 3.873361 | CGTTCCAACATGAGCATAGACAT | 59.127 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
386 | 695 | 4.333649 | CGTTCCAACATGAGCATAGACATT | 59.666 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
387 | 696 | 5.503031 | CGTTCCAACATGAGCATAGACATTC | 60.503 | 44.000 | 0.00 | 0.00 | 0.00 | 2.67 |
388 | 697 | 5.363562 | TCCAACATGAGCATAGACATTCT | 57.636 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
389 | 698 | 6.484364 | TCCAACATGAGCATAGACATTCTA | 57.516 | 37.500 | 0.00 | 0.00 | 32.87 | 2.10 |
390 | 699 | 6.519382 | TCCAACATGAGCATAGACATTCTAG | 58.481 | 40.000 | 0.00 | 0.00 | 31.67 | 2.43 |
391 | 700 | 6.098838 | TCCAACATGAGCATAGACATTCTAGT | 59.901 | 38.462 | 0.00 | 0.00 | 31.67 | 2.57 |
392 | 701 | 7.287696 | TCCAACATGAGCATAGACATTCTAGTA | 59.712 | 37.037 | 0.00 | 0.00 | 31.67 | 1.82 |
393 | 702 | 7.598118 | CCAACATGAGCATAGACATTCTAGTAG | 59.402 | 40.741 | 0.00 | 0.00 | 31.67 | 2.57 |
394 | 703 | 8.355913 | CAACATGAGCATAGACATTCTAGTAGA | 58.644 | 37.037 | 0.00 | 0.00 | 31.67 | 2.59 |
395 | 704 | 8.648698 | ACATGAGCATAGACATTCTAGTAGAT | 57.351 | 34.615 | 0.00 | 0.00 | 31.67 | 1.98 |
396 | 705 | 9.087871 | ACATGAGCATAGACATTCTAGTAGATT | 57.912 | 33.333 | 0.00 | 0.00 | 31.67 | 2.40 |
401 | 710 | 9.238368 | AGCATAGACATTCTAGTAGATTAGACC | 57.762 | 37.037 | 0.00 | 0.00 | 31.67 | 3.85 |
402 | 711 | 8.178964 | GCATAGACATTCTAGTAGATTAGACCG | 58.821 | 40.741 | 0.00 | 0.00 | 31.67 | 4.79 |
403 | 712 | 9.221933 | CATAGACATTCTAGTAGATTAGACCGT | 57.778 | 37.037 | 0.00 | 0.00 | 31.67 | 4.83 |
404 | 713 | 7.499321 | AGACATTCTAGTAGATTAGACCGTG | 57.501 | 40.000 | 0.00 | 0.00 | 29.67 | 4.94 |
405 | 714 | 7.281098 | AGACATTCTAGTAGATTAGACCGTGA | 58.719 | 38.462 | 0.00 | 0.00 | 29.67 | 4.35 |
406 | 715 | 7.940137 | AGACATTCTAGTAGATTAGACCGTGAT | 59.060 | 37.037 | 0.00 | 0.00 | 29.67 | 3.06 |
407 | 716 | 8.466617 | ACATTCTAGTAGATTAGACCGTGATT | 57.533 | 34.615 | 0.00 | 0.00 | 29.67 | 2.57 |
408 | 717 | 8.353684 | ACATTCTAGTAGATTAGACCGTGATTG | 58.646 | 37.037 | 0.00 | 0.00 | 29.67 | 2.67 |
409 | 718 | 6.315091 | TCTAGTAGATTAGACCGTGATTGC | 57.685 | 41.667 | 0.00 | 0.00 | 0.00 | 3.56 |
410 | 719 | 5.826208 | TCTAGTAGATTAGACCGTGATTGCA | 59.174 | 40.000 | 0.00 | 0.00 | 0.00 | 4.08 |
411 | 720 | 4.683832 | AGTAGATTAGACCGTGATTGCAC | 58.316 | 43.478 | 0.00 | 0.00 | 41.67 | 4.57 |
426 | 735 | 3.020102 | GCACGCCTGCACTTTAATG | 57.980 | 52.632 | 2.56 | 0.00 | 43.62 | 1.90 |
427 | 736 | 1.072666 | GCACGCCTGCACTTTAATGC | 61.073 | 55.000 | 2.56 | 0.00 | 43.62 | 3.56 |
442 | 751 | 8.707839 | GCACTTTAATGCACTAAAATTTTAGCA | 58.292 | 29.630 | 29.54 | 24.91 | 45.39 | 3.49 |
459 | 768 | 9.592720 | AATTTTAGCAAAATTTTGTACGCAATC | 57.407 | 25.926 | 27.13 | 11.52 | 46.01 | 2.67 |
460 | 769 | 7.700322 | TTTAGCAAAATTTTGTACGCAATCA | 57.300 | 28.000 | 27.13 | 4.70 | 40.24 | 2.57 |
461 | 770 | 5.574815 | AGCAAAATTTTGTACGCAATCAC | 57.425 | 34.783 | 27.13 | 10.29 | 40.24 | 3.06 |
462 | 771 | 4.447389 | AGCAAAATTTTGTACGCAATCACC | 59.553 | 37.500 | 27.13 | 9.85 | 40.24 | 4.02 |
463 | 772 | 4.210120 | GCAAAATTTTGTACGCAATCACCA | 59.790 | 37.500 | 27.13 | 0.00 | 40.24 | 4.17 |
464 | 773 | 5.107143 | GCAAAATTTTGTACGCAATCACCAT | 60.107 | 36.000 | 27.13 | 0.00 | 40.24 | 3.55 |
465 | 774 | 6.298103 | CAAAATTTTGTACGCAATCACCATG | 58.702 | 36.000 | 20.57 | 0.00 | 34.18 | 3.66 |
466 | 775 | 5.384063 | AATTTTGTACGCAATCACCATGA | 57.616 | 34.783 | 0.00 | 0.00 | 34.18 | 3.07 |
467 | 776 | 5.581126 | ATTTTGTACGCAATCACCATGAT | 57.419 | 34.783 | 0.00 | 0.00 | 39.09 | 2.45 |
469 | 778 | 5.384063 | TTTGTACGCAATCACCATGATTT | 57.616 | 34.783 | 1.25 | 0.00 | 44.03 | 2.17 |
470 | 779 | 6.502136 | TTTGTACGCAATCACCATGATTTA | 57.498 | 33.333 | 1.25 | 0.00 | 44.03 | 1.40 |
471 | 780 | 6.691754 | TTGTACGCAATCACCATGATTTAT | 57.308 | 33.333 | 1.25 | 0.00 | 44.03 | 1.40 |
472 | 781 | 6.299023 | TGTACGCAATCACCATGATTTATC | 57.701 | 37.500 | 1.25 | 0.00 | 44.03 | 1.75 |
473 | 782 | 6.054941 | TGTACGCAATCACCATGATTTATCT | 58.945 | 36.000 | 1.25 | 0.00 | 44.03 | 1.98 |
474 | 783 | 5.428496 | ACGCAATCACCATGATTTATCTG | 57.572 | 39.130 | 1.25 | 0.00 | 44.03 | 2.90 |
475 | 784 | 4.883585 | ACGCAATCACCATGATTTATCTGT | 59.116 | 37.500 | 1.25 | 0.00 | 44.03 | 3.41 |
476 | 785 | 5.008019 | ACGCAATCACCATGATTTATCTGTC | 59.992 | 40.000 | 1.25 | 0.00 | 44.03 | 3.51 |
477 | 786 | 5.007921 | CGCAATCACCATGATTTATCTGTCA | 59.992 | 40.000 | 1.25 | 0.00 | 44.03 | 3.58 |
478 | 787 | 6.293790 | CGCAATCACCATGATTTATCTGTCAT | 60.294 | 38.462 | 1.25 | 0.00 | 44.03 | 3.06 |
479 | 788 | 7.082602 | GCAATCACCATGATTTATCTGTCATC | 58.917 | 38.462 | 1.25 | 0.00 | 44.03 | 2.92 |
480 | 789 | 7.040617 | GCAATCACCATGATTTATCTGTCATCT | 60.041 | 37.037 | 1.25 | 0.00 | 44.03 | 2.90 |
481 | 790 | 8.847196 | CAATCACCATGATTTATCTGTCATCTT | 58.153 | 33.333 | 1.25 | 0.00 | 44.03 | 2.40 |
486 | 795 | 9.857656 | ACCATGATTTATCTGTCATCTTATTGT | 57.142 | 29.630 | 0.00 | 0.00 | 32.98 | 2.71 |
526 | 835 | 9.617523 | TGAGCAAGTTCTTATATTCAATCATCA | 57.382 | 29.630 | 0.00 | 0.00 | 0.00 | 3.07 |
556 | 865 | 9.725019 | TTTACATGTCATCTTCTTGATAACACT | 57.275 | 29.630 | 0.00 | 0.00 | 36.24 | 3.55 |
557 | 866 | 9.725019 | TTACATGTCATCTTCTTGATAACACTT | 57.275 | 29.630 | 0.00 | 0.00 | 36.24 | 3.16 |
558 | 867 | 8.037382 | ACATGTCATCTTCTTGATAACACTTG | 57.963 | 34.615 | 0.00 | 0.00 | 36.24 | 3.16 |
559 | 868 | 7.663081 | ACATGTCATCTTCTTGATAACACTTGT | 59.337 | 33.333 | 0.00 | 0.00 | 36.24 | 3.16 |
560 | 869 | 9.154847 | CATGTCATCTTCTTGATAACACTTGTA | 57.845 | 33.333 | 0.00 | 0.00 | 36.24 | 2.41 |
561 | 870 | 9.896645 | ATGTCATCTTCTTGATAACACTTGTAT | 57.103 | 29.630 | 0.00 | 0.00 | 36.24 | 2.29 |
562 | 871 | 9.725019 | TGTCATCTTCTTGATAACACTTGTATT | 57.275 | 29.630 | 0.00 | 0.00 | 28.76 | 1.89 |
577 | 886 | 9.908152 | AACACTTGTATTTGATAAAAGCTTACC | 57.092 | 29.630 | 0.00 | 0.00 | 34.12 | 2.85 |
578 | 887 | 9.073475 | ACACTTGTATTTGATAAAAGCTTACCA | 57.927 | 29.630 | 0.00 | 0.00 | 34.12 | 3.25 |
579 | 888 | 9.906660 | CACTTGTATTTGATAAAAGCTTACCAA | 57.093 | 29.630 | 0.00 | 0.00 | 34.12 | 3.67 |
626 | 935 | 9.886132 | AGAAAGTTAATAAGACATGATACGGTT | 57.114 | 29.630 | 0.00 | 0.00 | 0.00 | 4.44 |
634 | 943 | 9.832445 | AATAAGACATGATACGGTTAAGTTGAT | 57.168 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
635 | 944 | 9.832445 | ATAAGACATGATACGGTTAAGTTGATT | 57.168 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
636 | 945 | 8.561738 | AAGACATGATACGGTTAAGTTGATTT | 57.438 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
637 | 946 | 8.561738 | AGACATGATACGGTTAAGTTGATTTT | 57.438 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
638 | 947 | 9.661563 | AGACATGATACGGTTAAGTTGATTTTA | 57.338 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
639 | 948 | 9.916397 | GACATGATACGGTTAAGTTGATTTTAG | 57.084 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
640 | 949 | 9.661563 | ACATGATACGGTTAAGTTGATTTTAGA | 57.338 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
676 | 985 | 9.578439 | GATAGAAGAAAATTCAAACATGGAAGG | 57.422 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
677 | 986 | 6.226052 | AGAAGAAAATTCAAACATGGAAGGC | 58.774 | 36.000 | 0.00 | 0.00 | 0.00 | 4.35 |
678 | 987 | 5.549742 | AGAAAATTCAAACATGGAAGGCA | 57.450 | 34.783 | 0.00 | 0.00 | 0.00 | 4.75 |
679 | 988 | 5.544650 | AGAAAATTCAAACATGGAAGGCAG | 58.455 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
680 | 989 | 5.305128 | AGAAAATTCAAACATGGAAGGCAGA | 59.695 | 36.000 | 0.00 | 0.00 | 0.00 | 4.26 |
681 | 990 | 4.796038 | AATTCAAACATGGAAGGCAGAG | 57.204 | 40.909 | 0.00 | 0.00 | 0.00 | 3.35 |
682 | 991 | 3.507162 | TTCAAACATGGAAGGCAGAGA | 57.493 | 42.857 | 0.00 | 0.00 | 0.00 | 3.10 |
683 | 992 | 3.063510 | TCAAACATGGAAGGCAGAGAG | 57.936 | 47.619 | 0.00 | 0.00 | 0.00 | 3.20 |
684 | 993 | 2.639347 | TCAAACATGGAAGGCAGAGAGA | 59.361 | 45.455 | 0.00 | 0.00 | 0.00 | 3.10 |
685 | 994 | 3.008330 | CAAACATGGAAGGCAGAGAGAG | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
686 | 995 | 2.244486 | ACATGGAAGGCAGAGAGAGA | 57.756 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
687 | 996 | 2.109774 | ACATGGAAGGCAGAGAGAGAG | 58.890 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
688 | 997 | 2.292126 | ACATGGAAGGCAGAGAGAGAGA | 60.292 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
689 | 998 | 2.612285 | TGGAAGGCAGAGAGAGAGAA | 57.388 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
690 | 999 | 2.894731 | TGGAAGGCAGAGAGAGAGAAA | 58.105 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
691 | 1000 | 2.830923 | TGGAAGGCAGAGAGAGAGAAAG | 59.169 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
692 | 1001 | 3.096092 | GGAAGGCAGAGAGAGAGAAAGA | 58.904 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
693 | 1002 | 3.131046 | GGAAGGCAGAGAGAGAGAAAGAG | 59.869 | 52.174 | 0.00 | 0.00 | 0.00 | 2.85 |
694 | 1003 | 3.737559 | AGGCAGAGAGAGAGAAAGAGA | 57.262 | 47.619 | 0.00 | 0.00 | 0.00 | 3.10 |
695 | 1004 | 3.624777 | AGGCAGAGAGAGAGAAAGAGAG | 58.375 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
696 | 1005 | 3.266772 | AGGCAGAGAGAGAGAAAGAGAGA | 59.733 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
697 | 1006 | 4.016444 | GGCAGAGAGAGAGAAAGAGAGAA | 58.984 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
698 | 1007 | 4.096984 | GGCAGAGAGAGAGAAAGAGAGAAG | 59.903 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
699 | 1008 | 4.096984 | GCAGAGAGAGAGAAAGAGAGAAGG | 59.903 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
700 | 1009 | 4.641989 | CAGAGAGAGAGAAAGAGAGAAGGG | 59.358 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
701 | 1010 | 4.540099 | AGAGAGAGAGAAAGAGAGAAGGGA | 59.460 | 45.833 | 0.00 | 0.00 | 0.00 | 4.20 |
702 | 1011 | 5.194537 | AGAGAGAGAGAAAGAGAGAAGGGAT | 59.805 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
703 | 1012 | 5.203528 | AGAGAGAGAAAGAGAGAAGGGATG | 58.796 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
704 | 1013 | 4.289245 | AGAGAGAAAGAGAGAAGGGATGG | 58.711 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
705 | 1014 | 3.383223 | AGAGAAAGAGAGAAGGGATGGG | 58.617 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
706 | 1015 | 2.437651 | GAGAAAGAGAGAAGGGATGGGG | 59.562 | 54.545 | 0.00 | 0.00 | 0.00 | 4.96 |
707 | 1016 | 1.492599 | GAAAGAGAGAAGGGATGGGGG | 59.507 | 57.143 | 0.00 | 0.00 | 0.00 | 5.40 |
708 | 1017 | 0.725133 | AAGAGAGAAGGGATGGGGGA | 59.275 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
709 | 1018 | 0.030603 | AGAGAGAAGGGATGGGGGAC | 60.031 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
710 | 1019 | 1.383248 | AGAGAAGGGATGGGGGACG | 60.383 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
711 | 1020 | 1.689582 | GAGAAGGGATGGGGGACGT | 60.690 | 63.158 | 0.00 | 0.00 | 0.00 | 4.34 |
712 | 1021 | 1.972660 | GAGAAGGGATGGGGGACGTG | 61.973 | 65.000 | 0.00 | 0.00 | 0.00 | 4.49 |
713 | 1022 | 1.993391 | GAAGGGATGGGGGACGTGA | 60.993 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
714 | 1023 | 1.972660 | GAAGGGATGGGGGACGTGAG | 61.973 | 65.000 | 0.00 | 0.00 | 0.00 | 3.51 |
715 | 1024 | 2.365105 | GGGATGGGGGACGTGAGA | 60.365 | 66.667 | 0.00 | 0.00 | 0.00 | 3.27 |
716 | 1025 | 1.766461 | GGGATGGGGGACGTGAGAT | 60.766 | 63.158 | 0.00 | 0.00 | 0.00 | 2.75 |
717 | 1026 | 1.345715 | GGGATGGGGGACGTGAGATT | 61.346 | 60.000 | 0.00 | 0.00 | 0.00 | 2.40 |
718 | 1027 | 0.179045 | GGATGGGGGACGTGAGATTG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 2.67 |
719 | 1028 | 0.179045 | GATGGGGGACGTGAGATTGG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
720 | 1029 | 0.620410 | ATGGGGGACGTGAGATTGGA | 60.620 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
721 | 1030 | 1.221021 | GGGGGACGTGAGATTGGAC | 59.779 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
722 | 1031 | 1.153628 | GGGGACGTGAGATTGGACG | 60.154 | 63.158 | 0.00 | 0.00 | 41.41 | 4.79 |
723 | 1032 | 1.601419 | GGGGACGTGAGATTGGACGA | 61.601 | 60.000 | 0.00 | 0.00 | 38.94 | 4.20 |
724 | 1033 | 0.245539 | GGGACGTGAGATTGGACGAA | 59.754 | 55.000 | 0.00 | 0.00 | 38.94 | 3.85 |
725 | 1034 | 1.630148 | GGACGTGAGATTGGACGAAG | 58.370 | 55.000 | 0.00 | 0.00 | 38.94 | 3.79 |
726 | 1035 | 1.630148 | GACGTGAGATTGGACGAAGG | 58.370 | 55.000 | 0.00 | 0.00 | 38.94 | 3.46 |
727 | 1036 | 1.201647 | GACGTGAGATTGGACGAAGGA | 59.798 | 52.381 | 0.00 | 0.00 | 38.94 | 3.36 |
728 | 1037 | 1.616865 | ACGTGAGATTGGACGAAGGAA | 59.383 | 47.619 | 0.00 | 0.00 | 38.94 | 3.36 |
729 | 1038 | 2.036733 | ACGTGAGATTGGACGAAGGAAA | 59.963 | 45.455 | 0.00 | 0.00 | 38.94 | 3.13 |
730 | 1039 | 2.668457 | CGTGAGATTGGACGAAGGAAAG | 59.332 | 50.000 | 0.00 | 0.00 | 37.81 | 2.62 |
731 | 1040 | 3.003480 | GTGAGATTGGACGAAGGAAAGG | 58.997 | 50.000 | 0.00 | 0.00 | 0.00 | 3.11 |
732 | 1041 | 2.637872 | TGAGATTGGACGAAGGAAAGGT | 59.362 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
733 | 1042 | 3.003480 | GAGATTGGACGAAGGAAAGGTG | 58.997 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
734 | 1043 | 2.637872 | AGATTGGACGAAGGAAAGGTGA | 59.362 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
735 | 1044 | 3.072476 | AGATTGGACGAAGGAAAGGTGAA | 59.928 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
736 | 1045 | 3.284793 | TTGGACGAAGGAAAGGTGAAA | 57.715 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
737 | 1046 | 2.567985 | TGGACGAAGGAAAGGTGAAAC | 58.432 | 47.619 | 0.00 | 0.00 | 0.00 | 2.78 |
738 | 1047 | 1.529865 | GGACGAAGGAAAGGTGAAACG | 59.470 | 52.381 | 0.00 | 0.00 | 38.12 | 3.60 |
739 | 1048 | 1.529865 | GACGAAGGAAAGGTGAAACGG | 59.470 | 52.381 | 0.00 | 0.00 | 38.12 | 4.44 |
740 | 1049 | 1.139455 | ACGAAGGAAAGGTGAAACGGA | 59.861 | 47.619 | 0.00 | 0.00 | 38.12 | 4.69 |
741 | 1050 | 2.215196 | CGAAGGAAAGGTGAAACGGAA | 58.785 | 47.619 | 0.00 | 0.00 | 38.12 | 4.30 |
742 | 1051 | 2.614983 | CGAAGGAAAGGTGAAACGGAAA | 59.385 | 45.455 | 0.00 | 0.00 | 38.12 | 3.13 |
743 | 1052 | 3.303791 | CGAAGGAAAGGTGAAACGGAAAG | 60.304 | 47.826 | 0.00 | 0.00 | 38.12 | 2.62 |
744 | 1053 | 1.954382 | AGGAAAGGTGAAACGGAAAGC | 59.046 | 47.619 | 0.00 | 0.00 | 38.12 | 3.51 |
745 | 1054 | 1.954382 | GGAAAGGTGAAACGGAAAGCT | 59.046 | 47.619 | 0.00 | 0.00 | 38.12 | 3.74 |
746 | 1055 | 2.361119 | GGAAAGGTGAAACGGAAAGCTT | 59.639 | 45.455 | 0.00 | 0.00 | 38.12 | 3.74 |
747 | 1056 | 3.566742 | GGAAAGGTGAAACGGAAAGCTTA | 59.433 | 43.478 | 0.00 | 0.00 | 38.12 | 3.09 |
748 | 1057 | 4.217767 | GGAAAGGTGAAACGGAAAGCTTAT | 59.782 | 41.667 | 0.00 | 0.00 | 38.12 | 1.73 |
749 | 1058 | 4.766404 | AAGGTGAAACGGAAAGCTTATG | 57.234 | 40.909 | 0.00 | 0.00 | 38.12 | 1.90 |
750 | 1059 | 3.751518 | AGGTGAAACGGAAAGCTTATGT | 58.248 | 40.909 | 0.00 | 0.00 | 38.12 | 2.29 |
751 | 1060 | 4.142038 | AGGTGAAACGGAAAGCTTATGTT | 58.858 | 39.130 | 0.00 | 2.00 | 38.12 | 2.71 |
752 | 1061 | 4.583073 | AGGTGAAACGGAAAGCTTATGTTT | 59.417 | 37.500 | 18.13 | 18.13 | 38.12 | 2.83 |
753 | 1062 | 5.068591 | AGGTGAAACGGAAAGCTTATGTTTT | 59.931 | 36.000 | 18.75 | 9.39 | 38.12 | 2.43 |
754 | 1063 | 5.751509 | GGTGAAACGGAAAGCTTATGTTTTT | 59.248 | 36.000 | 18.75 | 8.27 | 38.12 | 1.94 |
789 | 1098 | 9.166222 | AGAGAGATGGAGATTTAGTAGTAGAGA | 57.834 | 37.037 | 0.00 | 0.00 | 0.00 | 3.10 |
806 | 1115 | 3.869065 | AGAGATTTCGCACCGGAAATTA | 58.131 | 40.909 | 9.46 | 0.00 | 44.41 | 1.40 |
809 | 1118 | 4.196193 | AGATTTCGCACCGGAAATTATGA | 58.804 | 39.130 | 9.46 | 0.00 | 44.41 | 2.15 |
810 | 1119 | 4.273480 | AGATTTCGCACCGGAAATTATGAG | 59.727 | 41.667 | 9.46 | 0.00 | 44.41 | 2.90 |
822 | 1131 | 2.471815 | ATTATGAGAGGGGACGTGGA | 57.528 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
863 | 1172 | 1.977544 | CTCTCAACCTCCGGTCCGT | 60.978 | 63.158 | 11.06 | 0.00 | 33.12 | 4.69 |
894 | 1203 | 1.438651 | GCTACATCCACAGTGCGAAA | 58.561 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
898 | 1207 | 0.606401 | CATCCACAGTGCGAAAGGGT | 60.606 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
901 | 1210 | 0.030638 | CCACAGTGCGAAAGGGTTTG | 59.969 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
907 | 1216 | 0.821711 | TGCGAAAGGGTTTGGGTGAG | 60.822 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
913 | 1222 | 1.525175 | AGGGTTTGGGTGAGTGGTAA | 58.475 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
914 | 1223 | 1.144298 | AGGGTTTGGGTGAGTGGTAAC | 59.856 | 52.381 | 0.00 | 0.00 | 0.00 | 2.50 |
960 | 1271 | 0.890683 | CATCCTTTCCAGTGCCAACC | 59.109 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
961 | 1272 | 0.779997 | ATCCTTTCCAGTGCCAACCT | 59.220 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
971 | 1282 | 1.009389 | GTGCCAACCTCTCTCGTTCG | 61.009 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
973 | 1284 | 1.289066 | CCAACCTCTCTCGTTCGCA | 59.711 | 57.895 | 0.00 | 0.00 | 0.00 | 5.10 |
986 | 1297 | 0.603569 | GTTCGCACTCTCCTTCCTCA | 59.396 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
987 | 1298 | 1.205893 | GTTCGCACTCTCCTTCCTCAT | 59.794 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
996 | 1307 | 3.139850 | TCTCCTTCCTCATATCGTCGAC | 58.860 | 50.000 | 5.18 | 5.18 | 0.00 | 4.20 |
1089 | 1400 | 3.353029 | TCGTACACCGTCGGCGAA | 61.353 | 61.111 | 12.93 | 0.00 | 41.33 | 4.70 |
1195 | 1506 | 4.415332 | GCTCTTCGCCGTCGGTGA | 62.415 | 66.667 | 23.33 | 23.33 | 40.77 | 4.02 |
1198 | 1509 | 2.355363 | CTTCGCCGTCGGTGACAA | 60.355 | 61.111 | 26.62 | 12.72 | 42.31 | 3.18 |
1199 | 1510 | 2.355363 | TTCGCCGTCGGTGACAAG | 60.355 | 61.111 | 26.62 | 5.02 | 42.31 | 3.16 |
1218 | 1554 | 1.136891 | AGCACGAGTATACTGCATGCA | 59.863 | 47.619 | 21.29 | 21.29 | 34.03 | 3.96 |
1219 | 1555 | 1.258982 | GCACGAGTATACTGCATGCAC | 59.741 | 52.381 | 18.46 | 6.72 | 0.00 | 4.57 |
1220 | 1556 | 1.518515 | CACGAGTATACTGCATGCACG | 59.481 | 52.381 | 18.46 | 18.93 | 38.80 | 5.34 |
1221 | 1557 | 1.134367 | ACGAGTATACTGCATGCACGT | 59.866 | 47.619 | 18.46 | 19.62 | 40.53 | 4.49 |
1222 | 1558 | 2.356695 | ACGAGTATACTGCATGCACGTA | 59.643 | 45.455 | 23.38 | 23.30 | 42.68 | 3.57 |
1223 | 1559 | 2.719556 | CGAGTATACTGCATGCACGTAC | 59.280 | 50.000 | 18.46 | 18.17 | 30.83 | 3.67 |
1252 | 1613 | 6.966066 | GTGTTGAAATTGTGTTGGAATTTTGG | 59.034 | 34.615 | 0.00 | 0.00 | 34.00 | 3.28 |
1330 | 1691 | 3.701604 | CTACACGTCCTGCTCCGGC | 62.702 | 68.421 | 0.00 | 0.00 | 39.26 | 6.13 |
1670 | 2104 | 4.043750 | TCGTCTTAATTTCGTGTCGTGTT | 58.956 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
1685 | 2119 | 0.865639 | GTGTTTGCACGTTGGTCTGC | 60.866 | 55.000 | 0.00 | 0.00 | 35.75 | 4.26 |
1704 | 2138 | 4.278513 | TGCCTCCCGGGGTTTGTG | 62.279 | 66.667 | 23.50 | 4.01 | 35.12 | 3.33 |
1713 | 2147 | 2.517402 | GGGTTTGTGGTCGTGCCA | 60.517 | 61.111 | 0.00 | 0.00 | 46.95 | 4.92 |
1735 | 2169 | 3.065786 | AGAGCATTATGGATTGTGCGTTG | 59.934 | 43.478 | 0.00 | 0.00 | 42.18 | 4.10 |
1738 | 2172 | 3.427368 | GCATTATGGATTGTGCGTTGTGA | 60.427 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
1739 | 2173 | 3.822594 | TTATGGATTGTGCGTTGTGAC | 57.177 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
1754 | 2188 | 4.898370 | GTTGTGACGAATGCTTTCTATCC | 58.102 | 43.478 | 10.29 | 4.00 | 0.00 | 2.59 |
1755 | 2189 | 3.531538 | TGTGACGAATGCTTTCTATCCC | 58.468 | 45.455 | 10.29 | 1.22 | 0.00 | 3.85 |
1759 | 2193 | 3.798202 | ACGAATGCTTTCTATCCCTGAC | 58.202 | 45.455 | 10.29 | 0.00 | 0.00 | 3.51 |
1760 | 2194 | 3.197766 | ACGAATGCTTTCTATCCCTGACA | 59.802 | 43.478 | 10.29 | 0.00 | 0.00 | 3.58 |
1761 | 2195 | 3.806521 | CGAATGCTTTCTATCCCTGACAG | 59.193 | 47.826 | 10.29 | 0.00 | 0.00 | 3.51 |
1762 | 2196 | 4.681781 | CGAATGCTTTCTATCCCTGACAGT | 60.682 | 45.833 | 10.29 | 0.00 | 0.00 | 3.55 |
1763 | 2197 | 4.851639 | ATGCTTTCTATCCCTGACAGTT | 57.148 | 40.909 | 0.93 | 0.00 | 0.00 | 3.16 |
1764 | 2198 | 4.207891 | TGCTTTCTATCCCTGACAGTTC | 57.792 | 45.455 | 0.93 | 0.00 | 0.00 | 3.01 |
1765 | 2199 | 3.840666 | TGCTTTCTATCCCTGACAGTTCT | 59.159 | 43.478 | 0.93 | 0.00 | 0.00 | 3.01 |
1768 | 2202 | 5.707764 | GCTTTCTATCCCTGACAGTTCTTTT | 59.292 | 40.000 | 0.93 | 0.00 | 0.00 | 2.27 |
1777 | 2213 | 6.872020 | TCCCTGACAGTTCTTTTCGTAATAAG | 59.128 | 38.462 | 0.93 | 0.00 | 0.00 | 1.73 |
1779 | 2215 | 7.386848 | CCCTGACAGTTCTTTTCGTAATAAGAA | 59.613 | 37.037 | 0.93 | 0.00 | 37.88 | 2.52 |
1793 | 2229 | 8.766000 | TCGTAATAAGAATACTTTGTGCAAGA | 57.234 | 30.769 | 0.00 | 0.00 | 37.53 | 3.02 |
1794 | 2230 | 9.210329 | TCGTAATAAGAATACTTTGTGCAAGAA | 57.790 | 29.630 | 0.00 | 0.00 | 37.53 | 2.52 |
1795 | 2231 | 9.820229 | CGTAATAAGAATACTTTGTGCAAGAAA | 57.180 | 29.630 | 0.00 | 0.00 | 37.53 | 2.52 |
1800 | 2236 | 8.634475 | AAGAATACTTTGTGCAAGAAAAAGTC | 57.366 | 30.769 | 16.71 | 7.26 | 41.84 | 3.01 |
1801 | 2237 | 8.000780 | AGAATACTTTGTGCAAGAAAAAGTCT | 57.999 | 30.769 | 16.71 | 8.58 | 41.84 | 3.24 |
1802 | 2238 | 8.131731 | AGAATACTTTGTGCAAGAAAAAGTCTC | 58.868 | 33.333 | 16.71 | 14.73 | 41.84 | 3.36 |
1803 | 2239 | 5.904362 | ACTTTGTGCAAGAAAAAGTCTCT | 57.096 | 34.783 | 10.60 | 0.00 | 39.34 | 3.10 |
1804 | 2240 | 6.272822 | ACTTTGTGCAAGAAAAAGTCTCTT | 57.727 | 33.333 | 10.60 | 0.00 | 39.34 | 2.85 |
1805 | 2241 | 6.691508 | ACTTTGTGCAAGAAAAAGTCTCTTT | 58.308 | 32.000 | 10.60 | 0.00 | 39.34 | 2.52 |
1806 | 2242 | 7.154656 | ACTTTGTGCAAGAAAAAGTCTCTTTT | 58.845 | 30.769 | 10.60 | 2.21 | 39.34 | 2.27 |
1807 | 2243 | 7.657354 | ACTTTGTGCAAGAAAAAGTCTCTTTTT | 59.343 | 29.630 | 16.59 | 16.59 | 39.34 | 1.94 |
1971 | 2407 | 2.648724 | CTAAAATGCAGCGCGCGG | 60.649 | 61.111 | 33.06 | 27.12 | 46.97 | 6.46 |
2052 | 2494 | 5.065731 | TGCATTCGAAACCAAAAGCAAAAAT | 59.934 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2060 | 2503 | 9.495754 | CGAAACCAAAAGCAAAAATATCAAAAA | 57.504 | 25.926 | 0.00 | 0.00 | 0.00 | 1.94 |
2143 | 2586 | 8.365210 | CGTTCAATACAACAAATAGTGCAATTC | 58.635 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2214 | 2657 | 3.055458 | TGCTCTTTGTCGTCCATTCCATA | 60.055 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
2256 | 2699 | 7.075851 | AGATCCTTCTGAAGATCATTATGCA | 57.924 | 36.000 | 18.68 | 0.00 | 0.00 | 3.96 |
2386 | 2829 | 0.036732 | TCTTGGCCACGCTCATTCTT | 59.963 | 50.000 | 3.88 | 0.00 | 0.00 | 2.52 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
18 | 19 | 2.615227 | ATCAAGACCTGGGGCGCATC | 62.615 | 60.000 | 10.83 | 0.25 | 0.00 | 3.91 |
62 | 63 | 3.701241 | TGAAACGTGTGAATTTTCTGCC | 58.299 | 40.909 | 0.00 | 0.00 | 31.68 | 4.85 |
81 | 82 | 9.508642 | CAGTATATATCACTTGTCTAGGACTGA | 57.491 | 37.037 | 0.00 | 0.00 | 33.15 | 3.41 |
83 | 84 | 8.167392 | AGCAGTATATATCACTTGTCTAGGACT | 58.833 | 37.037 | 0.00 | 0.00 | 33.15 | 3.85 |
92 | 93 | 9.351570 | CACTCACATAGCAGTATATATCACTTG | 57.648 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
136 | 137 | 1.279840 | GCAGTATCATTTCCGCCGC | 59.720 | 57.895 | 0.00 | 0.00 | 0.00 | 6.53 |
157 | 158 | 1.007964 | CTAGCTGGTCGGCATCTCG | 60.008 | 63.158 | 0.00 | 0.00 | 34.17 | 4.04 |
251 | 252 | 2.904866 | TTTCGGTGTGGGTGCAGC | 60.905 | 61.111 | 7.55 | 7.55 | 0.00 | 5.25 |
253 | 254 | 2.904866 | GCTTTCGGTGTGGGTGCA | 60.905 | 61.111 | 0.00 | 0.00 | 0.00 | 4.57 |
288 | 289 | 1.876156 | GCTCCCTTTTCGCTGATATGG | 59.124 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
295 | 296 | 0.603975 | GTGACAGCTCCCTTTTCGCT | 60.604 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
296 | 297 | 1.578206 | GGTGACAGCTCCCTTTTCGC | 61.578 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
297 | 298 | 1.291877 | CGGTGACAGCTCCCTTTTCG | 61.292 | 60.000 | 2.72 | 0.00 | 0.00 | 3.46 |
298 | 299 | 0.955919 | CCGGTGACAGCTCCCTTTTC | 60.956 | 60.000 | 2.72 | 0.00 | 0.00 | 2.29 |
305 | 614 | 1.153745 | CAGTAGCCGGTGACAGCTC | 60.154 | 63.158 | 1.90 | 0.00 | 40.56 | 4.09 |
307 | 616 | 2.125512 | CCAGTAGCCGGTGACAGC | 60.126 | 66.667 | 1.90 | 0.00 | 0.00 | 4.40 |
314 | 623 | 2.474410 | AAGAAAGAACCAGTAGCCGG | 57.526 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
315 | 624 | 5.469084 | AGTTTAAAGAAAGAACCAGTAGCCG | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 5.52 |
341 | 650 | 8.861033 | AACGCACGAACAATTATCTAAGTATA | 57.139 | 30.769 | 0.00 | 0.00 | 0.00 | 1.47 |
342 | 651 | 7.042925 | GGAACGCACGAACAATTATCTAAGTAT | 60.043 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
343 | 652 | 6.254157 | GGAACGCACGAACAATTATCTAAGTA | 59.746 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
344 | 653 | 5.063060 | GGAACGCACGAACAATTATCTAAGT | 59.937 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
345 | 654 | 5.062934 | TGGAACGCACGAACAATTATCTAAG | 59.937 | 40.000 | 0.00 | 0.00 | 0.00 | 2.18 |
346 | 655 | 4.930405 | TGGAACGCACGAACAATTATCTAA | 59.070 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
347 | 656 | 4.496360 | TGGAACGCACGAACAATTATCTA | 58.504 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
348 | 657 | 3.331150 | TGGAACGCACGAACAATTATCT | 58.669 | 40.909 | 0.00 | 0.00 | 0.00 | 1.98 |
349 | 658 | 3.733024 | TGGAACGCACGAACAATTATC | 57.267 | 42.857 | 0.00 | 0.00 | 0.00 | 1.75 |
350 | 659 | 3.251245 | TGTTGGAACGCACGAACAATTAT | 59.749 | 39.130 | 0.00 | 0.00 | 36.06 | 1.28 |
351 | 660 | 2.612672 | TGTTGGAACGCACGAACAATTA | 59.387 | 40.909 | 0.00 | 0.00 | 36.06 | 1.40 |
352 | 661 | 1.402259 | TGTTGGAACGCACGAACAATT | 59.598 | 42.857 | 0.00 | 0.00 | 36.06 | 2.32 |
353 | 662 | 1.018148 | TGTTGGAACGCACGAACAAT | 58.982 | 45.000 | 0.00 | 0.00 | 36.06 | 2.71 |
354 | 663 | 1.018148 | ATGTTGGAACGCACGAACAA | 58.982 | 45.000 | 12.13 | 0.00 | 40.54 | 2.83 |
355 | 664 | 0.306228 | CATGTTGGAACGCACGAACA | 59.694 | 50.000 | 10.96 | 10.96 | 41.15 | 3.18 |
356 | 665 | 0.584396 | TCATGTTGGAACGCACGAAC | 59.416 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
357 | 666 | 0.865111 | CTCATGTTGGAACGCACGAA | 59.135 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
358 | 667 | 1.565156 | GCTCATGTTGGAACGCACGA | 61.565 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
359 | 668 | 1.154413 | GCTCATGTTGGAACGCACG | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
360 | 669 | 0.523072 | ATGCTCATGTTGGAACGCAC | 59.477 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
361 | 670 | 2.009051 | CTATGCTCATGTTGGAACGCA | 58.991 | 47.619 | 0.00 | 0.00 | 0.00 | 5.24 |
362 | 671 | 2.030946 | GTCTATGCTCATGTTGGAACGC | 59.969 | 50.000 | 0.00 | 0.00 | 0.00 | 4.84 |
363 | 672 | 3.261580 | TGTCTATGCTCATGTTGGAACG | 58.738 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
364 | 673 | 5.587844 | AGAATGTCTATGCTCATGTTGGAAC | 59.412 | 40.000 | 0.00 | 0.00 | 0.00 | 3.62 |
365 | 674 | 5.748402 | AGAATGTCTATGCTCATGTTGGAA | 58.252 | 37.500 | 0.00 | 0.00 | 0.00 | 3.53 |
366 | 675 | 5.363562 | AGAATGTCTATGCTCATGTTGGA | 57.636 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
367 | 676 | 6.286758 | ACTAGAATGTCTATGCTCATGTTGG | 58.713 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
368 | 677 | 8.355913 | TCTACTAGAATGTCTATGCTCATGTTG | 58.644 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
369 | 678 | 8.470657 | TCTACTAGAATGTCTATGCTCATGTT | 57.529 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
370 | 679 | 8.648698 | ATCTACTAGAATGTCTATGCTCATGT | 57.351 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
375 | 684 | 9.238368 | GGTCTAATCTACTAGAATGTCTATGCT | 57.762 | 37.037 | 0.00 | 0.00 | 29.74 | 3.79 |
376 | 685 | 8.178964 | CGGTCTAATCTACTAGAATGTCTATGC | 58.821 | 40.741 | 0.00 | 0.00 | 29.74 | 3.14 |
377 | 686 | 9.221933 | ACGGTCTAATCTACTAGAATGTCTATG | 57.778 | 37.037 | 0.00 | 0.00 | 29.74 | 2.23 |
378 | 687 | 9.221933 | CACGGTCTAATCTACTAGAATGTCTAT | 57.778 | 37.037 | 0.00 | 0.00 | 29.74 | 1.98 |
379 | 688 | 8.427276 | TCACGGTCTAATCTACTAGAATGTCTA | 58.573 | 37.037 | 0.00 | 0.00 | 29.74 | 2.59 |
380 | 689 | 7.281098 | TCACGGTCTAATCTACTAGAATGTCT | 58.719 | 38.462 | 0.00 | 0.00 | 29.74 | 3.41 |
381 | 690 | 7.493743 | TCACGGTCTAATCTACTAGAATGTC | 57.506 | 40.000 | 0.00 | 0.00 | 29.74 | 3.06 |
382 | 691 | 8.353684 | CAATCACGGTCTAATCTACTAGAATGT | 58.646 | 37.037 | 0.00 | 0.00 | 29.74 | 2.71 |
383 | 692 | 7.327275 | GCAATCACGGTCTAATCTACTAGAATG | 59.673 | 40.741 | 0.00 | 0.00 | 29.74 | 2.67 |
384 | 693 | 7.014326 | TGCAATCACGGTCTAATCTACTAGAAT | 59.986 | 37.037 | 0.00 | 0.00 | 29.74 | 2.40 |
385 | 694 | 6.320418 | TGCAATCACGGTCTAATCTACTAGAA | 59.680 | 38.462 | 0.00 | 0.00 | 29.74 | 2.10 |
386 | 695 | 5.826208 | TGCAATCACGGTCTAATCTACTAGA | 59.174 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
387 | 696 | 5.915758 | GTGCAATCACGGTCTAATCTACTAG | 59.084 | 44.000 | 0.00 | 0.00 | 32.98 | 2.57 |
388 | 697 | 5.828747 | GTGCAATCACGGTCTAATCTACTA | 58.171 | 41.667 | 0.00 | 0.00 | 32.98 | 1.82 |
389 | 698 | 4.683832 | GTGCAATCACGGTCTAATCTACT | 58.316 | 43.478 | 0.00 | 0.00 | 32.98 | 2.57 |
409 | 718 | 3.020102 | GCATTAAAGTGCAGGCGTG | 57.980 | 52.632 | 1.01 | 1.01 | 44.43 | 5.34 |
415 | 724 | 8.707839 | GCTAAAATTTTAGTGCATTAAAGTGCA | 58.292 | 29.630 | 29.56 | 0.00 | 44.31 | 4.57 |
416 | 725 | 8.707839 | TGCTAAAATTTTAGTGCATTAAAGTGC | 58.292 | 29.630 | 29.56 | 16.89 | 41.63 | 4.40 |
434 | 743 | 8.768955 | TGATTGCGTACAAAATTTTGCTAAAAT | 58.231 | 25.926 | 26.94 | 19.64 | 41.79 | 1.82 |
435 | 744 | 8.058915 | GTGATTGCGTACAAAATTTTGCTAAAA | 58.941 | 29.630 | 26.94 | 16.53 | 41.79 | 1.52 |
436 | 745 | 7.306866 | GGTGATTGCGTACAAAATTTTGCTAAA | 60.307 | 33.333 | 26.94 | 15.94 | 41.79 | 1.85 |
437 | 746 | 6.144724 | GGTGATTGCGTACAAAATTTTGCTAA | 59.855 | 34.615 | 26.94 | 16.08 | 41.79 | 3.09 |
438 | 747 | 5.631512 | GGTGATTGCGTACAAAATTTTGCTA | 59.368 | 36.000 | 26.94 | 16.62 | 41.79 | 3.49 |
439 | 748 | 4.447389 | GGTGATTGCGTACAAAATTTTGCT | 59.553 | 37.500 | 26.94 | 17.48 | 41.79 | 3.91 |
440 | 749 | 4.210120 | TGGTGATTGCGTACAAAATTTTGC | 59.790 | 37.500 | 26.94 | 15.61 | 41.79 | 3.68 |
441 | 750 | 5.896922 | TGGTGATTGCGTACAAAATTTTG | 57.103 | 34.783 | 25.73 | 25.73 | 39.77 | 2.44 |
442 | 751 | 6.219473 | TCATGGTGATTGCGTACAAAATTTT | 58.781 | 32.000 | 0.00 | 0.00 | 39.77 | 1.82 |
443 | 752 | 5.777802 | TCATGGTGATTGCGTACAAAATTT | 58.222 | 33.333 | 0.00 | 0.00 | 39.77 | 1.82 |
444 | 753 | 5.384063 | TCATGGTGATTGCGTACAAAATT | 57.616 | 34.783 | 0.00 | 0.00 | 39.77 | 1.82 |
445 | 754 | 5.581126 | ATCATGGTGATTGCGTACAAAAT | 57.419 | 34.783 | 0.00 | 0.00 | 39.77 | 1.82 |
446 | 755 | 5.384063 | AATCATGGTGATTGCGTACAAAA | 57.616 | 34.783 | 4.50 | 0.00 | 44.68 | 2.44 |
447 | 756 | 5.384063 | AAATCATGGTGATTGCGTACAAA | 57.616 | 34.783 | 5.99 | 0.00 | 45.57 | 2.83 |
448 | 757 | 6.542005 | AGATAAATCATGGTGATTGCGTACAA | 59.458 | 34.615 | 5.99 | 0.00 | 45.57 | 2.41 |
449 | 758 | 6.018016 | CAGATAAATCATGGTGATTGCGTACA | 60.018 | 38.462 | 5.99 | 0.00 | 45.57 | 2.90 |
450 | 759 | 6.017934 | ACAGATAAATCATGGTGATTGCGTAC | 60.018 | 38.462 | 5.99 | 0.00 | 45.57 | 3.67 |
451 | 760 | 6.054941 | ACAGATAAATCATGGTGATTGCGTA | 58.945 | 36.000 | 5.99 | 0.00 | 45.57 | 4.42 |
452 | 761 | 4.883585 | ACAGATAAATCATGGTGATTGCGT | 59.116 | 37.500 | 5.99 | 0.00 | 45.57 | 5.24 |
453 | 762 | 5.007921 | TGACAGATAAATCATGGTGATTGCG | 59.992 | 40.000 | 5.99 | 0.00 | 45.57 | 4.85 |
454 | 763 | 6.381481 | TGACAGATAAATCATGGTGATTGC | 57.619 | 37.500 | 5.99 | 0.65 | 45.57 | 3.56 |
455 | 764 | 8.392372 | AGATGACAGATAAATCATGGTGATTG | 57.608 | 34.615 | 5.99 | 0.00 | 45.57 | 2.67 |
460 | 769 | 9.857656 | ACAATAAGATGACAGATAAATCATGGT | 57.142 | 29.630 | 0.00 | 0.00 | 35.67 | 3.55 |
500 | 809 | 9.617523 | TGATGATTGAATATAAGAACTTGCTCA | 57.382 | 29.630 | 0.00 | 0.00 | 0.00 | 4.26 |
551 | 860 | 9.908152 | GGTAAGCTTTTATCAAATACAAGTGTT | 57.092 | 29.630 | 3.20 | 0.00 | 0.00 | 3.32 |
552 | 861 | 9.073475 | TGGTAAGCTTTTATCAAATACAAGTGT | 57.927 | 29.630 | 3.20 | 0.00 | 0.00 | 3.55 |
553 | 862 | 9.906660 | TTGGTAAGCTTTTATCAAATACAAGTG | 57.093 | 29.630 | 3.20 | 0.00 | 0.00 | 3.16 |
600 | 909 | 9.886132 | AACCGTATCATGTCTTATTAACTTTCT | 57.114 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
608 | 917 | 9.832445 | ATCAACTTAACCGTATCATGTCTTATT | 57.168 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
609 | 918 | 9.832445 | AATCAACTTAACCGTATCATGTCTTAT | 57.168 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
610 | 919 | 9.661563 | AAATCAACTTAACCGTATCATGTCTTA | 57.338 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
611 | 920 | 8.561738 | AAATCAACTTAACCGTATCATGTCTT | 57.438 | 30.769 | 0.00 | 0.00 | 0.00 | 3.01 |
612 | 921 | 8.561738 | AAAATCAACTTAACCGTATCATGTCT | 57.438 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
613 | 922 | 9.916397 | CTAAAATCAACTTAACCGTATCATGTC | 57.084 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
614 | 923 | 9.661563 | TCTAAAATCAACTTAACCGTATCATGT | 57.338 | 29.630 | 0.00 | 0.00 | 0.00 | 3.21 |
650 | 959 | 9.578439 | CCTTCCATGTTTGAATTTTCTTCTATC | 57.422 | 33.333 | 0.00 | 0.00 | 0.00 | 2.08 |
651 | 960 | 8.037166 | GCCTTCCATGTTTGAATTTTCTTCTAT | 58.963 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
652 | 961 | 7.015098 | TGCCTTCCATGTTTGAATTTTCTTCTA | 59.985 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
653 | 962 | 6.183360 | TGCCTTCCATGTTTGAATTTTCTTCT | 60.183 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
654 | 963 | 5.990996 | TGCCTTCCATGTTTGAATTTTCTTC | 59.009 | 36.000 | 0.00 | 0.00 | 0.00 | 2.87 |
655 | 964 | 5.927819 | TGCCTTCCATGTTTGAATTTTCTT | 58.072 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
656 | 965 | 5.305128 | TCTGCCTTCCATGTTTGAATTTTCT | 59.695 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
657 | 966 | 5.540911 | TCTGCCTTCCATGTTTGAATTTTC | 58.459 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
658 | 967 | 5.305128 | TCTCTGCCTTCCATGTTTGAATTTT | 59.695 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
659 | 968 | 4.834496 | TCTCTGCCTTCCATGTTTGAATTT | 59.166 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
660 | 969 | 4.410099 | TCTCTGCCTTCCATGTTTGAATT | 58.590 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
661 | 970 | 4.015084 | CTCTCTGCCTTCCATGTTTGAAT | 58.985 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
662 | 971 | 3.072915 | TCTCTCTGCCTTCCATGTTTGAA | 59.927 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
663 | 972 | 2.639347 | TCTCTCTGCCTTCCATGTTTGA | 59.361 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
664 | 973 | 3.008330 | CTCTCTCTGCCTTCCATGTTTG | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
665 | 974 | 2.909006 | TCTCTCTCTGCCTTCCATGTTT | 59.091 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
666 | 975 | 2.500910 | CTCTCTCTCTGCCTTCCATGTT | 59.499 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
667 | 976 | 2.109774 | CTCTCTCTCTGCCTTCCATGT | 58.890 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
668 | 977 | 2.386779 | TCTCTCTCTCTGCCTTCCATG | 58.613 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
669 | 978 | 2.844654 | TCTCTCTCTCTGCCTTCCAT | 57.155 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
670 | 979 | 2.612285 | TTCTCTCTCTCTGCCTTCCA | 57.388 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
671 | 980 | 3.096092 | TCTTTCTCTCTCTCTGCCTTCC | 58.904 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
672 | 981 | 4.016444 | TCTCTTTCTCTCTCTCTGCCTTC | 58.984 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
673 | 982 | 4.019174 | CTCTCTTTCTCTCTCTCTGCCTT | 58.981 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
674 | 983 | 3.266772 | TCTCTCTTTCTCTCTCTCTGCCT | 59.733 | 47.826 | 0.00 | 0.00 | 0.00 | 4.75 |
675 | 984 | 3.620488 | TCTCTCTTTCTCTCTCTCTGCC | 58.380 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
676 | 985 | 4.096984 | CCTTCTCTCTTTCTCTCTCTCTGC | 59.903 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
677 | 986 | 4.641989 | CCCTTCTCTCTTTCTCTCTCTCTG | 59.358 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
678 | 987 | 4.540099 | TCCCTTCTCTCTTTCTCTCTCTCT | 59.460 | 45.833 | 0.00 | 0.00 | 0.00 | 3.10 |
679 | 988 | 4.855340 | TCCCTTCTCTCTTTCTCTCTCTC | 58.145 | 47.826 | 0.00 | 0.00 | 0.00 | 3.20 |
680 | 989 | 4.946160 | TCCCTTCTCTCTTTCTCTCTCT | 57.054 | 45.455 | 0.00 | 0.00 | 0.00 | 3.10 |
681 | 990 | 4.342092 | CCATCCCTTCTCTCTTTCTCTCTC | 59.658 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
682 | 991 | 4.289245 | CCATCCCTTCTCTCTTTCTCTCT | 58.711 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
683 | 992 | 3.387699 | CCCATCCCTTCTCTCTTTCTCTC | 59.612 | 52.174 | 0.00 | 0.00 | 0.00 | 3.20 |
684 | 993 | 3.383223 | CCCATCCCTTCTCTCTTTCTCT | 58.617 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
685 | 994 | 2.437651 | CCCCATCCCTTCTCTCTTTCTC | 59.562 | 54.545 | 0.00 | 0.00 | 0.00 | 2.87 |
686 | 995 | 2.486716 | CCCCATCCCTTCTCTCTTTCT | 58.513 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
687 | 996 | 1.492599 | CCCCCATCCCTTCTCTCTTTC | 59.507 | 57.143 | 0.00 | 0.00 | 0.00 | 2.62 |
688 | 997 | 1.082879 | TCCCCCATCCCTTCTCTCTTT | 59.917 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
689 | 998 | 0.725133 | TCCCCCATCCCTTCTCTCTT | 59.275 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
690 | 999 | 0.030603 | GTCCCCCATCCCTTCTCTCT | 60.031 | 60.000 | 0.00 | 0.00 | 0.00 | 3.10 |
691 | 1000 | 1.403687 | CGTCCCCCATCCCTTCTCTC | 61.404 | 65.000 | 0.00 | 0.00 | 0.00 | 3.20 |
692 | 1001 | 1.383248 | CGTCCCCCATCCCTTCTCT | 60.383 | 63.158 | 0.00 | 0.00 | 0.00 | 3.10 |
693 | 1002 | 1.689582 | ACGTCCCCCATCCCTTCTC | 60.690 | 63.158 | 0.00 | 0.00 | 0.00 | 2.87 |
694 | 1003 | 1.995626 | CACGTCCCCCATCCCTTCT | 60.996 | 63.158 | 0.00 | 0.00 | 0.00 | 2.85 |
695 | 1004 | 1.972660 | CTCACGTCCCCCATCCCTTC | 61.973 | 65.000 | 0.00 | 0.00 | 0.00 | 3.46 |
696 | 1005 | 1.995626 | CTCACGTCCCCCATCCCTT | 60.996 | 63.158 | 0.00 | 0.00 | 0.00 | 3.95 |
697 | 1006 | 2.257541 | ATCTCACGTCCCCCATCCCT | 62.258 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
698 | 1007 | 1.345715 | AATCTCACGTCCCCCATCCC | 61.346 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
699 | 1008 | 0.179045 | CAATCTCACGTCCCCCATCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
700 | 1009 | 0.179045 | CCAATCTCACGTCCCCCATC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
701 | 1010 | 0.620410 | TCCAATCTCACGTCCCCCAT | 60.620 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
702 | 1011 | 1.229368 | TCCAATCTCACGTCCCCCA | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 4.96 |
703 | 1012 | 1.221021 | GTCCAATCTCACGTCCCCC | 59.779 | 63.158 | 0.00 | 0.00 | 0.00 | 5.40 |
704 | 1013 | 1.153628 | CGTCCAATCTCACGTCCCC | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 4.81 |
705 | 1014 | 0.245539 | TTCGTCCAATCTCACGTCCC | 59.754 | 55.000 | 0.00 | 0.00 | 37.30 | 4.46 |
706 | 1015 | 1.630148 | CTTCGTCCAATCTCACGTCC | 58.370 | 55.000 | 0.00 | 0.00 | 37.30 | 4.79 |
707 | 1016 | 1.201647 | TCCTTCGTCCAATCTCACGTC | 59.798 | 52.381 | 0.00 | 0.00 | 37.30 | 4.34 |
708 | 1017 | 1.254026 | TCCTTCGTCCAATCTCACGT | 58.746 | 50.000 | 0.00 | 0.00 | 37.30 | 4.49 |
709 | 1018 | 2.363788 | TTCCTTCGTCCAATCTCACG | 57.636 | 50.000 | 0.00 | 0.00 | 37.36 | 4.35 |
710 | 1019 | 3.003480 | CCTTTCCTTCGTCCAATCTCAC | 58.997 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
711 | 1020 | 2.637872 | ACCTTTCCTTCGTCCAATCTCA | 59.362 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
712 | 1021 | 3.003480 | CACCTTTCCTTCGTCCAATCTC | 58.997 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
713 | 1022 | 2.637872 | TCACCTTTCCTTCGTCCAATCT | 59.362 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
714 | 1023 | 3.053831 | TCACCTTTCCTTCGTCCAATC | 57.946 | 47.619 | 0.00 | 0.00 | 0.00 | 2.67 |
715 | 1024 | 3.502123 | TTCACCTTTCCTTCGTCCAAT | 57.498 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
716 | 1025 | 2.946990 | GTTTCACCTTTCCTTCGTCCAA | 59.053 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
717 | 1026 | 2.567985 | GTTTCACCTTTCCTTCGTCCA | 58.432 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
718 | 1027 | 1.529865 | CGTTTCACCTTTCCTTCGTCC | 59.470 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
719 | 1028 | 1.529865 | CCGTTTCACCTTTCCTTCGTC | 59.470 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
720 | 1029 | 1.139455 | TCCGTTTCACCTTTCCTTCGT | 59.861 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
721 | 1030 | 1.873698 | TCCGTTTCACCTTTCCTTCG | 58.126 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
722 | 1031 | 3.550233 | GCTTTCCGTTTCACCTTTCCTTC | 60.550 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
723 | 1032 | 2.361119 | GCTTTCCGTTTCACCTTTCCTT | 59.639 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
724 | 1033 | 1.954382 | GCTTTCCGTTTCACCTTTCCT | 59.046 | 47.619 | 0.00 | 0.00 | 0.00 | 3.36 |
725 | 1034 | 1.954382 | AGCTTTCCGTTTCACCTTTCC | 59.046 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
726 | 1035 | 3.710326 | AAGCTTTCCGTTTCACCTTTC | 57.290 | 42.857 | 0.00 | 0.00 | 0.00 | 2.62 |
727 | 1036 | 4.583073 | ACATAAGCTTTCCGTTTCACCTTT | 59.417 | 37.500 | 3.20 | 0.00 | 0.00 | 3.11 |
728 | 1037 | 4.142038 | ACATAAGCTTTCCGTTTCACCTT | 58.858 | 39.130 | 3.20 | 0.00 | 0.00 | 3.50 |
729 | 1038 | 3.751518 | ACATAAGCTTTCCGTTTCACCT | 58.248 | 40.909 | 3.20 | 0.00 | 0.00 | 4.00 |
730 | 1039 | 4.499037 | AACATAAGCTTTCCGTTTCACC | 57.501 | 40.909 | 3.20 | 0.00 | 0.00 | 4.02 |
731 | 1040 | 6.822073 | AAAAACATAAGCTTTCCGTTTCAC | 57.178 | 33.333 | 3.20 | 0.00 | 0.00 | 3.18 |
763 | 1072 | 9.166222 | TCTCTACTACTAAATCTCCATCTCTCT | 57.834 | 37.037 | 0.00 | 0.00 | 0.00 | 3.10 |
764 | 1073 | 9.959721 | ATCTCTACTACTAAATCTCCATCTCTC | 57.040 | 37.037 | 0.00 | 0.00 | 0.00 | 3.20 |
768 | 1077 | 9.834628 | CGAAATCTCTACTACTAAATCTCCATC | 57.165 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
769 | 1078 | 8.301002 | GCGAAATCTCTACTACTAAATCTCCAT | 58.699 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
770 | 1079 | 7.284716 | TGCGAAATCTCTACTACTAAATCTCCA | 59.715 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
771 | 1080 | 7.592164 | GTGCGAAATCTCTACTACTAAATCTCC | 59.408 | 40.741 | 0.00 | 0.00 | 0.00 | 3.71 |
772 | 1081 | 7.592164 | GGTGCGAAATCTCTACTACTAAATCTC | 59.408 | 40.741 | 0.00 | 0.00 | 0.00 | 2.75 |
773 | 1082 | 7.427214 | GGTGCGAAATCTCTACTACTAAATCT | 58.573 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
774 | 1083 | 6.360148 | CGGTGCGAAATCTCTACTACTAAATC | 59.640 | 42.308 | 0.00 | 0.00 | 0.00 | 2.17 |
775 | 1084 | 6.207213 | CGGTGCGAAATCTCTACTACTAAAT | 58.793 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
776 | 1085 | 5.449588 | CCGGTGCGAAATCTCTACTACTAAA | 60.450 | 44.000 | 0.00 | 0.00 | 0.00 | 1.85 |
777 | 1086 | 4.036027 | CCGGTGCGAAATCTCTACTACTAA | 59.964 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
778 | 1087 | 3.562973 | CCGGTGCGAAATCTCTACTACTA | 59.437 | 47.826 | 0.00 | 0.00 | 0.00 | 1.82 |
779 | 1088 | 2.358267 | CCGGTGCGAAATCTCTACTACT | 59.642 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
780 | 1089 | 2.357009 | TCCGGTGCGAAATCTCTACTAC | 59.643 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
781 | 1090 | 2.646930 | TCCGGTGCGAAATCTCTACTA | 58.353 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
782 | 1091 | 1.471119 | TCCGGTGCGAAATCTCTACT | 58.529 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
783 | 1092 | 2.288961 | TTCCGGTGCGAAATCTCTAC | 57.711 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
784 | 1093 | 3.536956 | ATTTCCGGTGCGAAATCTCTA | 57.463 | 42.857 | 0.00 | 0.00 | 37.85 | 2.43 |
785 | 1094 | 2.403252 | ATTTCCGGTGCGAAATCTCT | 57.597 | 45.000 | 0.00 | 0.00 | 37.85 | 3.10 |
786 | 1095 | 4.272504 | TCATAATTTCCGGTGCGAAATCTC | 59.727 | 41.667 | 0.00 | 0.00 | 40.71 | 2.75 |
787 | 1096 | 4.196193 | TCATAATTTCCGGTGCGAAATCT | 58.804 | 39.130 | 0.00 | 0.00 | 40.71 | 2.40 |
788 | 1097 | 4.272504 | TCTCATAATTTCCGGTGCGAAATC | 59.727 | 41.667 | 0.00 | 0.00 | 40.71 | 2.17 |
789 | 1098 | 4.196193 | TCTCATAATTTCCGGTGCGAAAT | 58.804 | 39.130 | 0.00 | 0.00 | 42.84 | 2.17 |
806 | 1115 | 0.263172 | ATCTCCACGTCCCCTCTCAT | 59.737 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
809 | 1118 | 0.396417 | CAGATCTCCACGTCCCCTCT | 60.396 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
810 | 1119 | 0.395862 | TCAGATCTCCACGTCCCCTC | 60.396 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
822 | 1131 | 9.821240 | AGAGGTCTATTTATACACATCAGATCT | 57.179 | 33.333 | 0.00 | 0.00 | 0.00 | 2.75 |
894 | 1203 | 1.144298 | GTTACCACTCACCCAAACCCT | 59.856 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
898 | 1207 | 4.708576 | TGTATGTTACCACTCACCCAAA | 57.291 | 40.909 | 0.00 | 0.00 | 0.00 | 3.28 |
901 | 1210 | 3.199071 | TGGATGTATGTTACCACTCACCC | 59.801 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
907 | 1216 | 4.689071 | TGACGATGGATGTATGTTACCAC | 58.311 | 43.478 | 0.00 | 0.00 | 35.19 | 4.16 |
913 | 1222 | 7.904558 | AGGATATATGACGATGGATGTATGT | 57.095 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
914 | 1223 | 9.038803 | CAAAGGATATATGACGATGGATGTATG | 57.961 | 37.037 | 0.00 | 0.00 | 0.00 | 2.39 |
915 | 1224 | 7.712639 | GCAAAGGATATATGACGATGGATGTAT | 59.287 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
960 | 1271 | 0.098025 | GGAGAGTGCGAACGAGAGAG | 59.902 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
961 | 1272 | 0.321741 | AGGAGAGTGCGAACGAGAGA | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 3.10 |
971 | 1282 | 2.625790 | ACGATATGAGGAAGGAGAGTGC | 59.374 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
973 | 1284 | 3.142951 | CGACGATATGAGGAAGGAGAGT | 58.857 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
986 | 1297 | 1.816835 | ACGCCATATGGTCGACGATAT | 59.183 | 47.619 | 31.64 | 22.81 | 37.85 | 1.63 |
987 | 1298 | 1.198408 | GACGCCATATGGTCGACGATA | 59.802 | 52.381 | 31.64 | 20.51 | 37.85 | 2.92 |
996 | 1307 | 0.319728 | CAGAGGAGGACGCCATATGG | 59.680 | 60.000 | 18.07 | 18.07 | 38.53 | 2.74 |
1188 | 1499 | 0.039798 | TACTCGTGCTTGTCACCGAC | 60.040 | 55.000 | 0.00 | 0.00 | 42.69 | 4.79 |
1191 | 1502 | 3.179830 | CAGTATACTCGTGCTTGTCACC | 58.820 | 50.000 | 1.26 | 0.00 | 42.69 | 4.02 |
1192 | 1503 | 2.599082 | GCAGTATACTCGTGCTTGTCAC | 59.401 | 50.000 | 1.26 | 0.00 | 42.23 | 3.67 |
1195 | 1506 | 3.190079 | CATGCAGTATACTCGTGCTTGT | 58.810 | 45.455 | 16.85 | 4.27 | 37.50 | 3.16 |
1198 | 1509 | 1.136891 | TGCATGCAGTATACTCGTGCT | 59.863 | 47.619 | 29.25 | 12.56 | 38.09 | 4.40 |
1199 | 1510 | 1.258982 | GTGCATGCAGTATACTCGTGC | 59.741 | 52.381 | 23.41 | 26.19 | 37.73 | 5.34 |
1200 | 1511 | 1.518515 | CGTGCATGCAGTATACTCGTG | 59.481 | 52.381 | 23.41 | 10.50 | 0.00 | 4.35 |
1203 | 1514 | 3.966154 | AGTACGTGCATGCAGTATACTC | 58.034 | 45.455 | 23.41 | 12.58 | 0.00 | 2.59 |
1220 | 1556 | 5.905181 | CCAACACAATTTCAACACGTAGTAC | 59.095 | 40.000 | 0.00 | 0.00 | 41.61 | 2.73 |
1221 | 1557 | 5.816258 | TCCAACACAATTTCAACACGTAGTA | 59.184 | 36.000 | 0.00 | 0.00 | 41.61 | 1.82 |
1223 | 1559 | 5.163302 | TCCAACACAATTTCAACACGTAG | 57.837 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
1236 | 1574 | 2.941720 | GCAAGCCAAAATTCCAACACAA | 59.058 | 40.909 | 0.00 | 0.00 | 0.00 | 3.33 |
1238 | 1576 | 2.545106 | CTGCAAGCCAAAATTCCAACAC | 59.455 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
1239 | 1577 | 2.170187 | ACTGCAAGCCAAAATTCCAACA | 59.830 | 40.909 | 0.00 | 0.00 | 37.60 | 3.33 |
1240 | 1578 | 2.545106 | CACTGCAAGCCAAAATTCCAAC | 59.455 | 45.455 | 0.00 | 0.00 | 37.60 | 3.77 |
1252 | 1613 | 0.164647 | CGTAGCTGAACACTGCAAGC | 59.835 | 55.000 | 0.00 | 0.00 | 37.60 | 4.01 |
1279 | 1640 | 3.499929 | CTCCGTCACCGTGTGCACT | 62.500 | 63.158 | 19.41 | 0.00 | 32.98 | 4.40 |
1565 | 1944 | 1.302033 | AGAACAGCGCCACCTTGAG | 60.302 | 57.895 | 2.29 | 0.00 | 0.00 | 3.02 |
1670 | 2104 | 2.512745 | ACGCAGACCAACGTGCAA | 60.513 | 55.556 | 0.00 | 0.00 | 41.76 | 4.08 |
1697 | 2131 | 1.507141 | CTCTGGCACGACCACAAACC | 61.507 | 60.000 | 0.00 | 0.00 | 46.36 | 3.27 |
1698 | 2132 | 1.941812 | CTCTGGCACGACCACAAAC | 59.058 | 57.895 | 0.00 | 0.00 | 46.36 | 2.93 |
1713 | 2147 | 2.923121 | ACGCACAATCCATAATGCTCT | 58.077 | 42.857 | 0.00 | 0.00 | 35.88 | 4.09 |
1735 | 2169 | 3.557595 | CAGGGATAGAAAGCATTCGTCAC | 59.442 | 47.826 | 10.68 | 7.89 | 40.63 | 3.67 |
1738 | 2172 | 3.197766 | TGTCAGGGATAGAAAGCATTCGT | 59.802 | 43.478 | 0.00 | 0.00 | 40.63 | 3.85 |
1739 | 2173 | 3.797039 | TGTCAGGGATAGAAAGCATTCG | 58.203 | 45.455 | 0.00 | 0.00 | 40.63 | 3.34 |
1740 | 2174 | 4.775236 | ACTGTCAGGGATAGAAAGCATTC | 58.225 | 43.478 | 4.53 | 0.00 | 35.70 | 2.67 |
1741 | 2175 | 4.851639 | ACTGTCAGGGATAGAAAGCATT | 57.148 | 40.909 | 4.53 | 0.00 | 0.00 | 3.56 |
1742 | 2176 | 4.472833 | AGAACTGTCAGGGATAGAAAGCAT | 59.527 | 41.667 | 4.53 | 0.00 | 0.00 | 3.79 |
1743 | 2177 | 3.840666 | AGAACTGTCAGGGATAGAAAGCA | 59.159 | 43.478 | 4.53 | 0.00 | 0.00 | 3.91 |
1744 | 2178 | 4.479786 | AGAACTGTCAGGGATAGAAAGC | 57.520 | 45.455 | 4.53 | 0.00 | 0.00 | 3.51 |
1745 | 2179 | 6.091441 | CGAAAAGAACTGTCAGGGATAGAAAG | 59.909 | 42.308 | 4.53 | 0.00 | 0.00 | 2.62 |
1747 | 2181 | 5.011738 | ACGAAAAGAACTGTCAGGGATAGAA | 59.988 | 40.000 | 4.53 | 0.00 | 0.00 | 2.10 |
1749 | 2183 | 4.822026 | ACGAAAAGAACTGTCAGGGATAG | 58.178 | 43.478 | 4.53 | 0.00 | 0.00 | 2.08 |
1751 | 2185 | 3.771577 | ACGAAAAGAACTGTCAGGGAT | 57.228 | 42.857 | 4.53 | 0.00 | 0.00 | 3.85 |
1752 | 2186 | 4.675976 | TTACGAAAAGAACTGTCAGGGA | 57.324 | 40.909 | 4.53 | 0.00 | 0.00 | 4.20 |
1753 | 2187 | 6.872020 | TCTTATTACGAAAAGAACTGTCAGGG | 59.128 | 38.462 | 4.53 | 0.00 | 0.00 | 4.45 |
1754 | 2188 | 7.884816 | TCTTATTACGAAAAGAACTGTCAGG | 57.115 | 36.000 | 4.53 | 0.00 | 0.00 | 3.86 |
1764 | 2198 | 9.820229 | TGCACAAAGTATTCTTATTACGAAAAG | 57.180 | 29.630 | 0.00 | 0.00 | 33.09 | 2.27 |
1768 | 2202 | 8.766000 | TCTTGCACAAAGTATTCTTATTACGA | 57.234 | 30.769 | 0.00 | 0.00 | 37.18 | 3.43 |
1777 | 2213 | 8.131731 | AGAGACTTTTTCTTGCACAAAGTATTC | 58.868 | 33.333 | 10.83 | 11.20 | 40.15 | 1.75 |
1779 | 2215 | 7.573968 | AGAGACTTTTTCTTGCACAAAGTAT | 57.426 | 32.000 | 10.83 | 8.81 | 40.15 | 2.12 |
1806 | 2242 | 4.570930 | ACTTTTTCTTGTTCCCGCAAAAA | 58.429 | 34.783 | 0.00 | 0.00 | 0.00 | 1.94 |
1807 | 2243 | 4.081917 | AGACTTTTTCTTGTTCCCGCAAAA | 60.082 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
1808 | 2244 | 3.445805 | AGACTTTTTCTTGTTCCCGCAAA | 59.554 | 39.130 | 0.00 | 0.00 | 0.00 | 3.68 |
1809 | 2245 | 3.020984 | AGACTTTTTCTTGTTCCCGCAA | 58.979 | 40.909 | 0.00 | 0.00 | 0.00 | 4.85 |
1810 | 2246 | 2.616842 | GAGACTTTTTCTTGTTCCCGCA | 59.383 | 45.455 | 0.00 | 0.00 | 33.22 | 5.69 |
1811 | 2247 | 2.879026 | AGAGACTTTTTCTTGTTCCCGC | 59.121 | 45.455 | 0.00 | 0.00 | 33.22 | 6.13 |
1812 | 2248 | 4.848757 | CAAGAGACTTTTTCTTGTTCCCG | 58.151 | 43.478 | 6.79 | 0.00 | 44.05 | 5.14 |
1948 | 2384 | 2.485122 | GCTGCATTTTAGCGCGGT | 59.515 | 55.556 | 17.70 | 17.70 | 36.85 | 5.68 |
2143 | 2586 | 9.295214 | TGTATTGTTGAACTATTTGTTGTGTTG | 57.705 | 29.630 | 0.00 | 0.00 | 39.30 | 3.33 |
2214 | 2657 | 0.987294 | CTCATTGAGGAGTGGTGGGT | 59.013 | 55.000 | 5.73 | 0.00 | 0.00 | 4.51 |
2256 | 2699 | 1.671054 | CCATTCAACGTCCCGCAGT | 60.671 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
2268 | 2711 | 1.776063 | TGCCTCCTATCATGCCATTCA | 59.224 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.