Multiple sequence alignment - TraesCS5A01G245700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G245700 chr5A 100.000 6253 0 0 1 6253 458973763 458967511 0.000000e+00 11548.0
1 TraesCS5A01G245700 chr5A 99.286 280 2 0 1 280 321330064 321329785 2.010000e-139 507.0
2 TraesCS5A01G245700 chr5A 96.127 284 7 1 1 280 620176584 620176301 1.590000e-125 460.0
3 TraesCS5A01G245700 chr5A 87.895 190 15 4 1486 1675 556237276 556237457 3.800000e-52 217.0
4 TraesCS5A01G245700 chr5A 85.897 78 9 1 5763 5838 459334851 459334774 1.440000e-11 82.4
5 TraesCS5A01G245700 chr5D 92.813 4021 203 48 1796 5761 358015424 358011435 0.000000e+00 5746.0
6 TraesCS5A01G245700 chr5D 82.244 1132 58 39 292 1355 358016601 358015545 0.000000e+00 845.0
7 TraesCS5A01G245700 chr5D 93.734 399 21 4 5856 6253 358011368 358010973 4.170000e-166 595.0
8 TraesCS5A01G245700 chr5D 81.722 755 36 40 752 1455 358016178 358015475 2.570000e-148 536.0
9 TraesCS5A01G245700 chr5D 88.312 77 7 1 5763 5837 389245425 389245501 2.400000e-14 91.6
10 TraesCS5A01G245700 chr5D 85.366 82 10 2 5763 5842 61045811 61045892 4.020000e-12 84.2
11 TraesCS5A01G245700 chr5B 91.838 2242 158 13 3534 5761 423228680 423226450 0.000000e+00 3103.0
12 TraesCS5A01G245700 chr5B 85.650 1554 152 38 1859 3390 423230182 423228678 0.000000e+00 1568.0
13 TraesCS5A01G245700 chr5B 82.173 819 42 42 752 1493 423231152 423230361 5.360000e-170 608.0
14 TraesCS5A01G245700 chr5B 90.842 404 27 6 5856 6253 423226383 423225984 3.320000e-147 532.0
15 TraesCS5A01G245700 chr5B 99.643 280 1 0 1 280 631810936 631811215 4.320000e-141 512.0
16 TraesCS5A01G245700 chr5B 86.591 440 38 10 294 721 423231581 423231151 3.410000e-127 466.0
17 TraesCS5A01G245700 chr5B 91.071 56 5 0 1800 1855 423230332 423230277 6.720000e-10 76.8
18 TraesCS5A01G245700 chr7A 99.643 280 1 0 1 280 109233682 109233403 4.320000e-141 512.0
19 TraesCS5A01G245700 chr7A 89.840 187 14 5 1490 1674 84858320 84858503 1.050000e-57 235.0
20 TraesCS5A01G245700 chr7A 84.091 220 27 7 1490 1707 134521934 134522147 8.220000e-49 206.0
21 TraesCS5A01G245700 chr1A 99.643 280 1 0 1 280 253726849 253727128 4.320000e-141 512.0
22 TraesCS5A01G245700 chr1A 96.429 280 10 0 1 280 304995473 304995752 4.420000e-126 462.0
23 TraesCS5A01G245700 chr1A 90.608 181 15 2 1496 1675 464856237 464856058 8.100000e-59 239.0
24 TraesCS5A01G245700 chr2B 99.286 280 2 0 1 280 13726498 13726777 2.010000e-139 507.0
25 TraesCS5A01G245700 chr3B 97.865 281 4 2 1 280 759808945 759808666 9.420000e-133 484.0
26 TraesCS5A01G245700 chr2A 95.714 280 11 1 1 280 322541321 322541043 3.440000e-122 449.0
27 TraesCS5A01G245700 chr2A 90.000 70 5 1 5767 5834 75652870 75652801 8.630000e-14 89.8
28 TraesCS5A01G245700 chr2A 87.013 77 8 1 5760 5834 406770026 406769950 1.120000e-12 86.1
29 TraesCS5A01G245700 chr2D 85.879 347 25 8 2527 2872 422564118 422564441 1.290000e-91 348.0
30 TraesCS5A01G245700 chr2D 79.616 417 34 11 2114 2529 422563590 422563956 1.040000e-62 252.0
31 TraesCS5A01G245700 chr2D 88.587 184 20 1 1491 1674 585675272 585675454 8.160000e-54 222.0
32 TraesCS5A01G245700 chr4D 89.189 185 19 1 1491 1675 145579767 145579584 4.880000e-56 230.0
33 TraesCS5A01G245700 chr7D 89.071 183 18 2 1490 1672 135376953 135377133 6.310000e-55 226.0
34 TraesCS5A01G245700 chrUn 88.172 186 21 1 1490 1675 45773715 45773899 2.930000e-53 220.0
35 TraesCS5A01G245700 chr3D 88.172 186 21 1 1490 1675 592869196 592869380 2.930000e-53 220.0
36 TraesCS5A01G245700 chr3D 89.041 73 7 1 5763 5835 566550949 566551020 8.630000e-14 89.8
37 TraesCS5A01G245700 chr1D 90.541 74 6 1 5763 5836 442373789 442373861 5.160000e-16 97.1
38 TraesCS5A01G245700 chr1D 88.000 75 8 1 5763 5836 479730173 479730247 3.110000e-13 87.9
39 TraesCS5A01G245700 chr4B 88.889 72 8 0 5763 5834 172508735 172508806 8.630000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G245700 chr5A 458967511 458973763 6252 True 11548.000000 11548 100.00000 1 6253 1 chr5A.!!$R2 6252
1 TraesCS5A01G245700 chr5D 358010973 358016601 5628 True 1930.500000 5746 87.62825 292 6253 4 chr5D.!!$R1 5961
2 TraesCS5A01G245700 chr5B 423225984 423231581 5597 True 1058.966667 3103 88.02750 294 6253 6 chr5B.!!$R1 5959
3 TraesCS5A01G245700 chr2D 422563590 422564441 851 False 300.000000 348 82.74750 2114 2872 2 chr2D.!!$F2 758

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
191 192 0.114364 TTTCCTTCCCCTTTCTGGCC 59.886 55.0 0.00 0.00 0.00 5.36 F
1287 1382 0.099968 GCATGCTCGTGTACCGACTA 59.900 55.0 11.37 0.00 41.60 2.59 F
2049 2265 0.113776 TGTACTCCAACGAGTCCCCT 59.886 55.0 0.00 0.00 46.90 4.79 F
2608 3000 0.242017 GGCGTGCTGAATTTCTGCTT 59.758 50.0 23.32 0.00 41.21 3.91 F
2820 3217 0.445436 GTGCATGGCTCTGTTCTTCG 59.555 55.0 0.00 0.00 0.00 3.79 F
3499 3907 0.249911 CCAACCTATCACTAGCCGGC 60.250 60.0 21.89 21.89 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2008 2220 0.178955 TGTACGAGTGTGAAGGGGGA 60.179 55.000 0.0 0.00 0.00 4.81 R
2367 2593 0.041090 GAAATGGGCAAGAGGGGGAA 59.959 55.000 0.0 0.00 0.00 3.97 R
3144 3552 1.009829 CATTTCTACAGCCGACAGCC 58.990 55.000 0.0 0.00 45.47 4.85 R
3486 3894 1.371183 GGCATGCCGGCTAGTGATA 59.629 57.895 29.7 5.17 37.17 2.15 R
4755 5169 0.107654 ATAAGGCCGTGCAAGAGACC 60.108 55.000 0.0 0.00 0.00 3.85 R
5298 5721 1.923356 AACCATGCTTAACCACAGGG 58.077 50.000 0.0 0.00 43.28 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.764885 AGAAACAGCCGCATATTCAAC 57.235 42.857 0.00 0.00 0.00 3.18
21 22 3.081061 AGAAACAGCCGCATATTCAACA 58.919 40.909 0.00 0.00 0.00 3.33
22 23 3.505680 AGAAACAGCCGCATATTCAACAA 59.494 39.130 0.00 0.00 0.00 2.83
23 24 2.919666 ACAGCCGCATATTCAACAAC 57.080 45.000 0.00 0.00 0.00 3.32
24 25 2.158559 ACAGCCGCATATTCAACAACA 58.841 42.857 0.00 0.00 0.00 3.33
25 26 2.556189 ACAGCCGCATATTCAACAACAA 59.444 40.909 0.00 0.00 0.00 2.83
26 27 3.173599 CAGCCGCATATTCAACAACAAG 58.826 45.455 0.00 0.00 0.00 3.16
27 28 2.164219 AGCCGCATATTCAACAACAAGG 59.836 45.455 0.00 0.00 0.00 3.61
28 29 2.529151 CCGCATATTCAACAACAAGGC 58.471 47.619 0.00 0.00 0.00 4.35
29 30 2.094803 CCGCATATTCAACAACAAGGCA 60.095 45.455 0.00 0.00 0.00 4.75
30 31 3.573598 CGCATATTCAACAACAAGGCAA 58.426 40.909 0.00 0.00 0.00 4.52
31 32 3.986572 CGCATATTCAACAACAAGGCAAA 59.013 39.130 0.00 0.00 0.00 3.68
32 33 4.143347 CGCATATTCAACAACAAGGCAAAC 60.143 41.667 0.00 0.00 0.00 2.93
33 34 4.152223 GCATATTCAACAACAAGGCAAACC 59.848 41.667 0.00 0.00 0.00 3.27
34 35 3.902881 ATTCAACAACAAGGCAAACCA 57.097 38.095 0.00 0.00 39.06 3.67
35 36 2.663826 TCAACAACAAGGCAAACCAC 57.336 45.000 0.00 0.00 39.06 4.16
36 37 2.175202 TCAACAACAAGGCAAACCACT 58.825 42.857 0.00 0.00 39.06 4.00
37 38 2.564947 TCAACAACAAGGCAAACCACTT 59.435 40.909 0.00 0.00 39.06 3.16
38 39 3.007398 TCAACAACAAGGCAAACCACTTT 59.993 39.130 0.00 0.00 39.06 2.66
39 40 3.245518 ACAACAAGGCAAACCACTTTC 57.754 42.857 0.00 0.00 39.06 2.62
40 41 2.831526 ACAACAAGGCAAACCACTTTCT 59.168 40.909 0.00 0.00 39.06 2.52
41 42 3.189285 CAACAAGGCAAACCACTTTCTG 58.811 45.455 0.00 0.00 39.06 3.02
42 43 2.733956 ACAAGGCAAACCACTTTCTGA 58.266 42.857 0.00 0.00 39.06 3.27
43 44 3.096092 ACAAGGCAAACCACTTTCTGAA 58.904 40.909 0.00 0.00 39.06 3.02
44 45 3.131046 ACAAGGCAAACCACTTTCTGAAG 59.869 43.478 0.00 0.00 39.06 3.02
45 46 2.310538 AGGCAAACCACTTTCTGAAGG 58.689 47.619 0.00 0.00 39.06 3.46
46 47 2.031870 GGCAAACCACTTTCTGAAGGT 58.968 47.619 0.00 0.00 37.19 3.50
47 48 2.034685 GGCAAACCACTTTCTGAAGGTC 59.965 50.000 1.78 0.00 37.19 3.85
48 49 2.287009 GCAAACCACTTTCTGAAGGTCG 60.287 50.000 1.78 0.00 37.19 4.79
49 50 1.594331 AACCACTTTCTGAAGGTCGC 58.406 50.000 1.78 0.00 37.19 5.19
50 51 0.759346 ACCACTTTCTGAAGGTCGCT 59.241 50.000 1.78 0.00 37.19 4.93
51 52 1.151668 CCACTTTCTGAAGGTCGCTG 58.848 55.000 1.78 0.00 37.19 5.18
52 53 1.270305 CCACTTTCTGAAGGTCGCTGA 60.270 52.381 1.78 0.00 37.19 4.26
53 54 2.064762 CACTTTCTGAAGGTCGCTGAG 58.935 52.381 1.78 0.00 37.19 3.35
54 55 1.964223 ACTTTCTGAAGGTCGCTGAGA 59.036 47.619 0.00 0.00 37.19 3.27
55 56 2.365617 ACTTTCTGAAGGTCGCTGAGAA 59.634 45.455 0.00 0.00 37.19 2.87
56 57 2.440539 TTCTGAAGGTCGCTGAGAAC 57.559 50.000 0.00 0.00 36.63 3.01
57 58 1.328279 TCTGAAGGTCGCTGAGAACA 58.672 50.000 0.00 0.00 39.61 3.18
58 59 1.895798 TCTGAAGGTCGCTGAGAACAT 59.104 47.619 0.00 0.00 39.61 2.71
59 60 2.300152 TCTGAAGGTCGCTGAGAACATT 59.700 45.455 0.00 0.00 39.61 2.71
60 61 3.509967 TCTGAAGGTCGCTGAGAACATTA 59.490 43.478 0.00 0.00 39.61 1.90
61 62 4.160439 TCTGAAGGTCGCTGAGAACATTAT 59.840 41.667 0.00 0.00 39.61 1.28
62 63 4.433615 TGAAGGTCGCTGAGAACATTATC 58.566 43.478 0.00 0.00 39.61 1.75
63 64 4.081697 TGAAGGTCGCTGAGAACATTATCA 60.082 41.667 0.00 0.00 39.61 2.15
64 65 4.471904 AGGTCGCTGAGAACATTATCAA 57.528 40.909 0.00 0.00 39.61 2.57
65 66 5.028549 AGGTCGCTGAGAACATTATCAAT 57.971 39.130 0.00 0.00 39.61 2.57
66 67 4.813161 AGGTCGCTGAGAACATTATCAATG 59.187 41.667 0.00 0.00 44.48 2.82
67 68 4.811024 GGTCGCTGAGAACATTATCAATGA 59.189 41.667 5.92 0.00 41.46 2.57
68 69 5.050499 GGTCGCTGAGAACATTATCAATGAG 60.050 44.000 5.92 0.00 41.46 2.90
69 70 4.509230 TCGCTGAGAACATTATCAATGAGC 59.491 41.667 5.92 3.37 41.46 4.26
70 71 4.510711 CGCTGAGAACATTATCAATGAGCT 59.489 41.667 5.92 0.00 41.46 4.09
71 72 5.558463 CGCTGAGAACATTATCAATGAGCTG 60.558 44.000 5.92 0.00 41.46 4.24
72 73 5.526479 GCTGAGAACATTATCAATGAGCTGA 59.474 40.000 5.92 0.00 41.46 4.26
73 74 6.037940 GCTGAGAACATTATCAATGAGCTGAA 59.962 38.462 5.92 0.00 41.46 3.02
74 75 7.255173 GCTGAGAACATTATCAATGAGCTGAAT 60.255 37.037 5.92 0.00 41.46 2.57
75 76 8.515695 TGAGAACATTATCAATGAGCTGAATT 57.484 30.769 5.92 0.00 41.46 2.17
76 77 8.618677 TGAGAACATTATCAATGAGCTGAATTC 58.381 33.333 5.92 0.00 41.46 2.17
77 78 8.749026 AGAACATTATCAATGAGCTGAATTCT 57.251 30.769 7.05 0.72 41.46 2.40
78 79 9.186837 AGAACATTATCAATGAGCTGAATTCTT 57.813 29.630 7.05 0.00 41.46 2.52
79 80 9.234384 GAACATTATCAATGAGCTGAATTCTTG 57.766 33.333 7.05 1.95 41.46 3.02
80 81 7.713750 ACATTATCAATGAGCTGAATTCTTGG 58.286 34.615 7.05 0.00 41.46 3.61
81 82 7.558807 ACATTATCAATGAGCTGAATTCTTGGA 59.441 33.333 7.05 0.00 41.46 3.53
82 83 7.563888 TTATCAATGAGCTGAATTCTTGGAG 57.436 36.000 7.05 0.00 0.00 3.86
83 84 5.169992 TCAATGAGCTGAATTCTTGGAGA 57.830 39.130 7.05 0.00 0.00 3.71
84 85 5.563592 TCAATGAGCTGAATTCTTGGAGAA 58.436 37.500 7.05 0.00 38.78 2.87
85 86 6.185511 TCAATGAGCTGAATTCTTGGAGAAT 58.814 36.000 7.05 0.00 46.22 2.40
86 87 6.318144 TCAATGAGCTGAATTCTTGGAGAATC 59.682 38.462 7.05 0.00 43.67 2.52
87 88 4.186926 TGAGCTGAATTCTTGGAGAATCG 58.813 43.478 7.05 0.00 43.67 3.34
88 89 2.941720 AGCTGAATTCTTGGAGAATCGC 59.058 45.455 7.05 7.30 43.67 4.58
89 90 2.941720 GCTGAATTCTTGGAGAATCGCT 59.058 45.455 7.05 0.00 43.67 4.93
90 91 3.242673 GCTGAATTCTTGGAGAATCGCTG 60.243 47.826 7.05 5.33 43.67 5.18
91 92 3.273434 TGAATTCTTGGAGAATCGCTGG 58.727 45.455 7.05 0.00 43.67 4.85
92 93 3.055167 TGAATTCTTGGAGAATCGCTGGA 60.055 43.478 7.05 0.00 43.67 3.86
93 94 3.853355 ATTCTTGGAGAATCGCTGGAT 57.147 42.857 0.00 0.00 40.75 3.41
94 95 3.634397 TTCTTGGAGAATCGCTGGATT 57.366 42.857 0.00 0.00 45.43 3.01
103 104 1.673168 ATCGCTGGATTCAAAGGAGC 58.327 50.000 0.00 0.00 0.00 4.70
104 105 0.324614 TCGCTGGATTCAAAGGAGCA 59.675 50.000 0.00 0.00 0.00 4.26
105 106 0.449388 CGCTGGATTCAAAGGAGCAC 59.551 55.000 0.00 0.00 0.00 4.40
106 107 1.538047 GCTGGATTCAAAGGAGCACA 58.462 50.000 0.00 0.00 0.00 4.57
107 108 1.888512 GCTGGATTCAAAGGAGCACAA 59.111 47.619 0.00 0.00 0.00 3.33
108 109 2.494870 GCTGGATTCAAAGGAGCACAAT 59.505 45.455 0.00 0.00 0.00 2.71
109 110 3.675228 GCTGGATTCAAAGGAGCACAATG 60.675 47.826 0.00 0.00 0.00 2.82
110 111 2.827322 TGGATTCAAAGGAGCACAATGG 59.173 45.455 0.00 0.00 0.00 3.16
111 112 3.091545 GGATTCAAAGGAGCACAATGGA 58.908 45.455 0.00 0.00 0.00 3.41
112 113 3.119352 GGATTCAAAGGAGCACAATGGAC 60.119 47.826 0.00 0.00 0.00 4.02
113 114 2.655090 TCAAAGGAGCACAATGGACA 57.345 45.000 0.00 0.00 0.00 4.02
114 115 2.507484 TCAAAGGAGCACAATGGACAG 58.493 47.619 0.00 0.00 0.00 3.51
115 116 1.542915 CAAAGGAGCACAATGGACAGG 59.457 52.381 0.00 0.00 0.00 4.00
116 117 0.610232 AAGGAGCACAATGGACAGGC 60.610 55.000 0.00 0.00 0.00 4.85
117 118 2.401766 GGAGCACAATGGACAGGCG 61.402 63.158 0.00 0.00 0.00 5.52
118 119 3.044059 GAGCACAATGGACAGGCGC 62.044 63.158 0.00 0.00 0.00 6.53
119 120 4.465512 GCACAATGGACAGGCGCG 62.466 66.667 0.00 0.00 0.00 6.86
120 121 2.741985 CACAATGGACAGGCGCGA 60.742 61.111 12.10 0.00 0.00 5.87
121 122 2.434884 ACAATGGACAGGCGCGAG 60.435 61.111 12.10 0.01 0.00 5.03
122 123 2.125552 CAATGGACAGGCGCGAGA 60.126 61.111 12.10 0.00 0.00 4.04
123 124 1.522355 CAATGGACAGGCGCGAGAT 60.522 57.895 12.10 0.00 0.00 2.75
124 125 0.249447 CAATGGACAGGCGCGAGATA 60.249 55.000 12.10 0.00 0.00 1.98
125 126 0.464036 AATGGACAGGCGCGAGATAA 59.536 50.000 12.10 0.00 0.00 1.75
126 127 0.681733 ATGGACAGGCGCGAGATAAT 59.318 50.000 12.10 0.00 0.00 1.28
127 128 0.464036 TGGACAGGCGCGAGATAATT 59.536 50.000 12.10 0.00 0.00 1.40
128 129 1.134521 TGGACAGGCGCGAGATAATTT 60.135 47.619 12.10 0.00 0.00 1.82
129 130 1.527311 GGACAGGCGCGAGATAATTTC 59.473 52.381 12.10 0.00 0.00 2.17
130 131 2.474816 GACAGGCGCGAGATAATTTCT 58.525 47.619 12.10 0.00 37.41 2.52
131 132 2.866762 GACAGGCGCGAGATAATTTCTT 59.133 45.455 12.10 0.00 33.74 2.52
132 133 3.270877 ACAGGCGCGAGATAATTTCTTT 58.729 40.909 12.10 0.00 33.74 2.52
133 134 3.309954 ACAGGCGCGAGATAATTTCTTTC 59.690 43.478 12.10 0.00 33.74 2.62
134 135 3.557595 CAGGCGCGAGATAATTTCTTTCT 59.442 43.478 12.10 0.00 33.74 2.52
135 136 4.034510 CAGGCGCGAGATAATTTCTTTCTT 59.965 41.667 12.10 0.00 33.74 2.52
136 137 4.636206 AGGCGCGAGATAATTTCTTTCTTT 59.364 37.500 12.10 0.00 33.74 2.52
137 138 4.964555 GGCGCGAGATAATTTCTTTCTTTC 59.035 41.667 12.10 0.00 33.74 2.62
138 139 5.220681 GGCGCGAGATAATTTCTTTCTTTCT 60.221 40.000 12.10 0.00 33.74 2.52
139 140 6.251549 GCGCGAGATAATTTCTTTCTTTCTT 58.748 36.000 12.10 0.00 33.74 2.52
140 141 6.743172 GCGCGAGATAATTTCTTTCTTTCTTT 59.257 34.615 12.10 0.00 33.74 2.52
141 142 7.045290 GCGCGAGATAATTTCTTTCTTTCTTTC 60.045 37.037 12.10 0.00 33.74 2.62
142 143 8.171840 CGCGAGATAATTTCTTTCTTTCTTTCT 58.828 33.333 0.00 0.00 33.74 2.52
143 144 9.833182 GCGAGATAATTTCTTTCTTTCTTTCTT 57.167 29.630 0.00 0.00 33.74 2.52
176 177 9.595823 TCTAGTGTACATTTGTATAGCTTTTCC 57.404 33.333 0.00 0.00 32.54 3.13
177 178 9.601217 CTAGTGTACATTTGTATAGCTTTTCCT 57.399 33.333 0.00 0.00 32.54 3.36
178 179 8.863872 AGTGTACATTTGTATAGCTTTTCCTT 57.136 30.769 0.00 0.00 32.54 3.36
179 180 8.947115 AGTGTACATTTGTATAGCTTTTCCTTC 58.053 33.333 0.00 0.00 32.54 3.46
180 181 8.182227 GTGTACATTTGTATAGCTTTTCCTTCC 58.818 37.037 0.00 0.00 32.54 3.46
181 182 6.775594 ACATTTGTATAGCTTTTCCTTCCC 57.224 37.500 0.00 0.00 0.00 3.97
182 183 5.656859 ACATTTGTATAGCTTTTCCTTCCCC 59.343 40.000 0.00 0.00 0.00 4.81
183 184 5.530176 TTTGTATAGCTTTTCCTTCCCCT 57.470 39.130 0.00 0.00 0.00 4.79
184 185 5.530176 TTGTATAGCTTTTCCTTCCCCTT 57.470 39.130 0.00 0.00 0.00 3.95
185 186 5.530176 TGTATAGCTTTTCCTTCCCCTTT 57.470 39.130 0.00 0.00 0.00 3.11
186 187 5.506708 TGTATAGCTTTTCCTTCCCCTTTC 58.493 41.667 0.00 0.00 0.00 2.62
187 188 4.955693 ATAGCTTTTCCTTCCCCTTTCT 57.044 40.909 0.00 0.00 0.00 2.52
188 189 2.881734 AGCTTTTCCTTCCCCTTTCTG 58.118 47.619 0.00 0.00 0.00 3.02
189 190 1.895798 GCTTTTCCTTCCCCTTTCTGG 59.104 52.381 0.00 0.00 0.00 3.86
190 191 1.895798 CTTTTCCTTCCCCTTTCTGGC 59.104 52.381 0.00 0.00 0.00 4.85
191 192 0.114364 TTTCCTTCCCCTTTCTGGCC 59.886 55.000 0.00 0.00 0.00 5.36
192 193 0.776080 TTCCTTCCCCTTTCTGGCCT 60.776 55.000 3.32 0.00 0.00 5.19
193 194 0.776080 TCCTTCCCCTTTCTGGCCTT 60.776 55.000 3.32 0.00 0.00 4.35
194 195 0.323816 CCTTCCCCTTTCTGGCCTTC 60.324 60.000 3.32 0.00 0.00 3.46
195 196 0.405585 CTTCCCCTTTCTGGCCTTCA 59.594 55.000 3.32 0.00 0.00 3.02
196 197 0.405585 TTCCCCTTTCTGGCCTTCAG 59.594 55.000 3.32 0.00 44.68 3.02
197 198 1.680314 CCCCTTTCTGGCCTTCAGC 60.680 63.158 3.32 0.00 43.06 4.26
211 212 3.972227 CAGCCGTCCTGAACCTTG 58.028 61.111 0.00 0.00 44.64 3.61
212 213 1.371183 CAGCCGTCCTGAACCTTGA 59.629 57.895 0.00 0.00 44.64 3.02
213 214 0.951040 CAGCCGTCCTGAACCTTGAC 60.951 60.000 0.00 0.00 44.64 3.18
214 215 1.671379 GCCGTCCTGAACCTTGACC 60.671 63.158 0.00 0.00 0.00 4.02
215 216 2.058675 CCGTCCTGAACCTTGACCT 58.941 57.895 0.00 0.00 0.00 3.85
216 217 0.320771 CCGTCCTGAACCTTGACCTG 60.321 60.000 0.00 0.00 0.00 4.00
217 218 0.393077 CGTCCTGAACCTTGACCTGT 59.607 55.000 0.00 0.00 0.00 4.00
218 219 1.616865 CGTCCTGAACCTTGACCTGTA 59.383 52.381 0.00 0.00 0.00 2.74
219 220 2.233922 CGTCCTGAACCTTGACCTGTAT 59.766 50.000 0.00 0.00 0.00 2.29
220 221 3.306780 CGTCCTGAACCTTGACCTGTATT 60.307 47.826 0.00 0.00 0.00 1.89
221 222 4.652822 GTCCTGAACCTTGACCTGTATTT 58.347 43.478 0.00 0.00 0.00 1.40
222 223 4.695928 GTCCTGAACCTTGACCTGTATTTC 59.304 45.833 0.00 0.00 0.00 2.17
223 224 4.597507 TCCTGAACCTTGACCTGTATTTCT 59.402 41.667 0.00 0.00 0.00 2.52
224 225 5.073144 TCCTGAACCTTGACCTGTATTTCTT 59.927 40.000 0.00 0.00 0.00 2.52
225 226 5.182001 CCTGAACCTTGACCTGTATTTCTTG 59.818 44.000 0.00 0.00 0.00 3.02
226 227 5.070001 TGAACCTTGACCTGTATTTCTTGG 58.930 41.667 0.00 0.00 0.00 3.61
227 228 4.034285 ACCTTGACCTGTATTTCTTGGG 57.966 45.455 0.00 0.00 0.00 4.12
228 229 3.245264 ACCTTGACCTGTATTTCTTGGGG 60.245 47.826 0.00 0.00 0.00 4.96
229 230 3.245264 CCTTGACCTGTATTTCTTGGGGT 60.245 47.826 0.00 0.00 0.00 4.95
230 231 3.433306 TGACCTGTATTTCTTGGGGTG 57.567 47.619 0.00 0.00 0.00 4.61
231 232 2.714250 TGACCTGTATTTCTTGGGGTGT 59.286 45.455 0.00 0.00 0.00 4.16
232 233 3.244770 TGACCTGTATTTCTTGGGGTGTC 60.245 47.826 0.00 0.00 0.00 3.67
233 234 2.986728 ACCTGTATTTCTTGGGGTGTCT 59.013 45.455 0.00 0.00 0.00 3.41
234 235 3.009143 ACCTGTATTTCTTGGGGTGTCTC 59.991 47.826 0.00 0.00 0.00 3.36
235 236 3.009033 CCTGTATTTCTTGGGGTGTCTCA 59.991 47.826 0.00 0.00 0.00 3.27
236 237 4.324563 CCTGTATTTCTTGGGGTGTCTCAT 60.325 45.833 0.00 0.00 0.00 2.90
237 238 4.843728 TGTATTTCTTGGGGTGTCTCATC 58.156 43.478 0.00 0.00 0.00 2.92
238 239 2.879103 TTTCTTGGGGTGTCTCATCC 57.121 50.000 0.00 0.00 33.05 3.51
239 240 2.044793 TTCTTGGGGTGTCTCATCCT 57.955 50.000 0.00 0.00 34.53 3.24
240 241 2.940514 TCTTGGGGTGTCTCATCCTA 57.059 50.000 0.00 0.00 34.53 2.94
241 242 3.421394 TCTTGGGGTGTCTCATCCTAT 57.579 47.619 0.00 0.00 34.53 2.57
242 243 3.309296 TCTTGGGGTGTCTCATCCTATC 58.691 50.000 0.00 0.00 34.53 2.08
243 244 3.051803 TCTTGGGGTGTCTCATCCTATCT 60.052 47.826 0.00 0.00 34.53 1.98
244 245 3.421394 TGGGGTGTCTCATCCTATCTT 57.579 47.619 0.00 0.00 34.53 2.40
245 246 4.552883 TGGGGTGTCTCATCCTATCTTA 57.447 45.455 0.00 0.00 34.53 2.10
246 247 4.890988 TGGGGTGTCTCATCCTATCTTAA 58.109 43.478 0.00 0.00 34.53 1.85
247 248 5.476983 TGGGGTGTCTCATCCTATCTTAAT 58.523 41.667 0.00 0.00 34.53 1.40
248 249 5.307976 TGGGGTGTCTCATCCTATCTTAATG 59.692 44.000 0.00 0.00 34.53 1.90
249 250 5.544176 GGGGTGTCTCATCCTATCTTAATGA 59.456 44.000 0.00 0.00 34.53 2.57
250 251 6.043243 GGGGTGTCTCATCCTATCTTAATGAA 59.957 42.308 0.00 0.00 34.53 2.57
251 252 7.256835 GGGGTGTCTCATCCTATCTTAATGAAT 60.257 40.741 0.00 0.00 34.53 2.57
252 253 7.605691 GGGTGTCTCATCCTATCTTAATGAATG 59.394 40.741 0.00 0.00 30.73 2.67
253 254 8.370940 GGTGTCTCATCCTATCTTAATGAATGA 58.629 37.037 0.00 0.00 0.00 2.57
254 255 9.770097 GTGTCTCATCCTATCTTAATGAATGAA 57.230 33.333 0.00 0.00 0.00 2.57
261 262 9.803507 ATCCTATCTTAATGAATGAAATCAGCA 57.196 29.630 0.00 0.00 31.76 4.41
262 263 9.060347 TCCTATCTTAATGAATGAAATCAGCAC 57.940 33.333 0.00 0.00 31.76 4.40
263 264 8.843262 CCTATCTTAATGAATGAAATCAGCACA 58.157 33.333 0.00 0.00 31.76 4.57
266 267 8.920509 TCTTAATGAATGAAATCAGCACAATG 57.079 30.769 0.00 0.00 31.76 2.82
267 268 7.490079 TCTTAATGAATGAAATCAGCACAATGC 59.510 33.333 0.00 0.00 45.46 3.56
279 280 2.458951 GCACAATGCTGTTTTTCGTCA 58.541 42.857 0.00 0.00 40.96 4.35
280 281 3.052036 GCACAATGCTGTTTTTCGTCAT 58.948 40.909 0.00 0.00 40.96 3.06
281 282 3.490526 GCACAATGCTGTTTTTCGTCATT 59.509 39.130 0.00 0.00 40.96 2.57
282 283 4.025813 GCACAATGCTGTTTTTCGTCATTT 60.026 37.500 0.00 0.00 40.96 2.32
283 284 5.502220 GCACAATGCTGTTTTTCGTCATTTT 60.502 36.000 0.00 0.00 40.96 1.82
284 285 6.476896 CACAATGCTGTTTTTCGTCATTTTT 58.523 32.000 0.00 0.00 31.64 1.94
401 411 2.802719 GTTTGTTGGAGGATAAGGGCA 58.197 47.619 0.00 0.00 0.00 5.36
446 456 3.346606 GCTTACCGGCGGCATAGC 61.347 66.667 28.71 26.35 0.00 2.97
447 457 2.421739 CTTACCGGCGGCATAGCT 59.578 61.111 28.71 7.94 37.29 3.32
463 473 4.537433 CTAGCCAGCCAGCGTCCC 62.537 72.222 0.00 0.00 38.01 4.46
546 556 4.410400 CGGGGGTTCACTGGCTCC 62.410 72.222 0.00 0.00 0.00 4.70
547 557 2.936032 GGGGGTTCACTGGCTCCT 60.936 66.667 0.00 0.00 0.00 3.69
548 558 2.671682 GGGGTTCACTGGCTCCTC 59.328 66.667 0.00 0.00 0.00 3.71
551 561 2.435059 GTTCACTGGCTCCTCCGC 60.435 66.667 0.00 0.00 37.80 5.54
585 595 1.375013 CCACAGGCAATGGCAAAGC 60.375 57.895 10.05 6.02 43.71 3.51
608 626 2.261671 CGTCCCTGAACCCACGAG 59.738 66.667 0.00 0.00 34.06 4.18
664 682 2.806621 GTCCGAACGCCCGTGTAC 60.807 66.667 0.00 0.00 0.00 2.90
708 727 0.955905 GTGACTCGGAGCTCCTATCC 59.044 60.000 29.73 16.41 0.00 2.59
718 737 4.853142 TCCTATCCGCACGGCCCT 62.853 66.667 3.66 0.00 34.68 5.19
719 738 3.861797 CCTATCCGCACGGCCCTT 61.862 66.667 3.66 0.00 34.68 3.95
720 739 2.588877 CTATCCGCACGGCCCTTG 60.589 66.667 3.66 0.00 34.68 3.61
732 751 4.988598 CCCTTGGAGCACGCACGT 62.989 66.667 0.00 0.00 0.00 4.49
733 752 3.414700 CCTTGGAGCACGCACGTC 61.415 66.667 0.00 0.00 0.00 4.34
734 753 3.767230 CTTGGAGCACGCACGTCG 61.767 66.667 0.00 5.97 45.38 5.12
744 763 2.430493 CGCACGTCGTTCTCAATCA 58.570 52.632 0.00 0.00 0.00 2.57
745 764 0.992072 CGCACGTCGTTCTCAATCAT 59.008 50.000 0.00 0.00 0.00 2.45
746 765 1.390123 CGCACGTCGTTCTCAATCATT 59.610 47.619 0.00 0.00 0.00 2.57
747 766 2.159841 CGCACGTCGTTCTCAATCATTT 60.160 45.455 0.00 0.00 0.00 2.32
748 767 3.664276 CGCACGTCGTTCTCAATCATTTT 60.664 43.478 0.00 0.00 0.00 1.82
749 768 4.219033 GCACGTCGTTCTCAATCATTTTT 58.781 39.130 0.00 0.00 0.00 1.94
902 926 1.051008 CTCGACCCATCCATCCATCA 58.949 55.000 0.00 0.00 0.00 3.07
903 927 1.627329 CTCGACCCATCCATCCATCAT 59.373 52.381 0.00 0.00 0.00 2.45
904 928 1.625315 TCGACCCATCCATCCATCATC 59.375 52.381 0.00 0.00 0.00 2.92
905 929 1.339438 CGACCCATCCATCCATCATCC 60.339 57.143 0.00 0.00 0.00 3.51
906 930 1.706866 GACCCATCCATCCATCATCCA 59.293 52.381 0.00 0.00 0.00 3.41
976 1002 2.550699 TTTCTACCCCCATGCGGCTG 62.551 60.000 0.00 0.00 0.00 4.85
1126 1206 1.879380 CTGCTGTCGAGGATAGAGAGG 59.121 57.143 0.00 0.00 31.78 3.69
1156 1236 1.595993 CGTGTGGGAGGACGATCACT 61.596 60.000 0.00 0.00 37.81 3.41
1157 1237 0.108615 GTGTGGGAGGACGATCACTG 60.109 60.000 0.00 0.00 0.00 3.66
1158 1238 1.257750 TGTGGGAGGACGATCACTGG 61.258 60.000 0.00 0.00 0.00 4.00
1159 1239 2.359169 TGGGAGGACGATCACTGGC 61.359 63.158 0.00 0.00 0.00 4.85
1160 1240 2.501610 GGAGGACGATCACTGGCC 59.498 66.667 0.00 0.00 0.00 5.36
1161 1241 2.060980 GGAGGACGATCACTGGCCT 61.061 63.158 3.32 0.00 0.00 5.19
1162 1242 1.439644 GAGGACGATCACTGGCCTC 59.560 63.158 3.32 5.35 38.45 4.70
1163 1243 2.105128 GGACGATCACTGGCCTCG 59.895 66.667 3.32 7.10 38.34 4.63
1164 1244 2.583593 GACGATCACTGGCCTCGC 60.584 66.667 10.94 1.45 35.89 5.03
1227 1308 8.628280 TGTTTGATCAAGAAATGTTGTCATGTA 58.372 29.630 8.41 0.00 34.19 2.29
1228 1309 9.630098 GTTTGATCAAGAAATGTTGTCATGTAT 57.370 29.630 8.41 0.00 34.19 2.29
1275 1356 0.305617 TCGCAATTGATCGCATGCTC 59.694 50.000 17.13 8.12 36.67 4.26
1278 1359 1.738432 CAATTGATCGCATGCTCGTG 58.262 50.000 17.13 0.00 0.00 4.35
1287 1382 0.099968 GCATGCTCGTGTACCGACTA 59.900 55.000 11.37 0.00 41.60 2.59
1307 1402 1.501741 CCAATGCCCAGTTCGTTCG 59.498 57.895 0.00 0.00 0.00 3.95
1309 1404 1.302511 AATGCCCAGTTCGTTCGCT 60.303 52.632 0.00 0.00 0.00 4.93
1310 1405 1.298859 AATGCCCAGTTCGTTCGCTC 61.299 55.000 0.00 0.00 0.00 5.03
1354 1449 1.013005 CGATCGAGCCAGCATCCATC 61.013 60.000 10.26 0.00 0.00 3.51
1361 1456 0.743097 GCCAGCATCCATCCTGTTTC 59.257 55.000 0.00 0.00 0.00 2.78
1362 1457 1.684248 GCCAGCATCCATCCTGTTTCT 60.684 52.381 0.00 0.00 0.00 2.52
1363 1458 2.022195 CCAGCATCCATCCTGTTTCTG 58.978 52.381 0.00 0.00 0.00 3.02
1379 1474 5.361427 TGTTTCTGTGGAAGATACACGAAA 58.639 37.500 0.00 0.00 40.59 3.46
1496 1598 8.611654 TTAACATTCAGTAAGTTTGTACTCCC 57.388 34.615 0.00 0.00 31.78 4.30
1497 1599 6.435292 ACATTCAGTAAGTTTGTACTCCCT 57.565 37.500 0.00 0.00 31.78 4.20
1498 1600 6.838382 ACATTCAGTAAGTTTGTACTCCCTT 58.162 36.000 0.00 0.00 31.78 3.95
1499 1601 6.935208 ACATTCAGTAAGTTTGTACTCCCTTC 59.065 38.462 0.00 0.00 31.78 3.46
1500 1602 5.479124 TCAGTAAGTTTGTACTCCCTTCC 57.521 43.478 0.00 0.00 31.78 3.46
1501 1603 5.152934 TCAGTAAGTTTGTACTCCCTTCCT 58.847 41.667 0.00 0.00 31.78 3.36
1502 1604 5.605488 TCAGTAAGTTTGTACTCCCTTCCTT 59.395 40.000 0.00 0.00 31.78 3.36
1503 1605 6.100714 TCAGTAAGTTTGTACTCCCTTCCTTT 59.899 38.462 0.00 0.00 31.78 3.11
1504 1606 6.771267 CAGTAAGTTTGTACTCCCTTCCTTTT 59.229 38.462 0.00 0.00 31.78 2.27
1505 1607 7.284716 CAGTAAGTTTGTACTCCCTTCCTTTTT 59.715 37.037 0.00 0.00 31.78 1.94
1506 1608 8.496916 AGTAAGTTTGTACTCCCTTCCTTTTTA 58.503 33.333 0.00 0.00 31.99 1.52
1507 1609 9.293404 GTAAGTTTGTACTCCCTTCCTTTTTAT 57.707 33.333 0.00 0.00 31.99 1.40
1508 1610 8.777578 AAGTTTGTACTCCCTTCCTTTTTATT 57.222 30.769 0.00 0.00 31.99 1.40
1509 1611 8.777578 AGTTTGTACTCCCTTCCTTTTTATTT 57.222 30.769 0.00 0.00 0.00 1.40
1510 1612 9.871175 AGTTTGTACTCCCTTCCTTTTTATTTA 57.129 29.630 0.00 0.00 0.00 1.40
1511 1613 9.903682 GTTTGTACTCCCTTCCTTTTTATTTAC 57.096 33.333 0.00 0.00 0.00 2.01
1512 1614 9.871175 TTTGTACTCCCTTCCTTTTTATTTACT 57.129 29.630 0.00 0.00 0.00 2.24
1513 1615 9.511272 TTGTACTCCCTTCCTTTTTATTTACTC 57.489 33.333 0.00 0.00 0.00 2.59
1514 1616 8.887393 TGTACTCCCTTCCTTTTTATTTACTCT 58.113 33.333 0.00 0.00 0.00 3.24
1515 1617 9.163899 GTACTCCCTTCCTTTTTATTTACTCTG 57.836 37.037 0.00 0.00 0.00 3.35
1516 1618 6.659668 ACTCCCTTCCTTTTTATTTACTCTGC 59.340 38.462 0.00 0.00 0.00 4.26
1517 1619 6.548321 TCCCTTCCTTTTTATTTACTCTGCA 58.452 36.000 0.00 0.00 0.00 4.41
1518 1620 7.182060 TCCCTTCCTTTTTATTTACTCTGCAT 58.818 34.615 0.00 0.00 0.00 3.96
1519 1621 8.333235 TCCCTTCCTTTTTATTTACTCTGCATA 58.667 33.333 0.00 0.00 0.00 3.14
1520 1622 9.136323 CCCTTCCTTTTTATTTACTCTGCATAT 57.864 33.333 0.00 0.00 0.00 1.78
1524 1626 8.840321 TCCTTTTTATTTACTCTGCATATCAGC 58.160 33.333 0.00 0.00 42.56 4.26
1525 1627 8.844244 CCTTTTTATTTACTCTGCATATCAGCT 58.156 33.333 0.00 0.00 42.56 4.24
1529 1631 8.962884 TTATTTACTCTGCATATCAGCTTTGA 57.037 30.769 0.00 0.00 42.56 2.69
1530 1632 6.668541 TTTACTCTGCATATCAGCTTTGAC 57.331 37.500 0.00 0.00 42.56 3.18
1531 1633 4.484537 ACTCTGCATATCAGCTTTGACT 57.515 40.909 0.00 0.00 42.56 3.41
1532 1634 5.604758 ACTCTGCATATCAGCTTTGACTA 57.395 39.130 0.00 0.00 42.56 2.59
1533 1635 5.982356 ACTCTGCATATCAGCTTTGACTAA 58.018 37.500 0.00 0.00 42.56 2.24
1534 1636 6.409704 ACTCTGCATATCAGCTTTGACTAAA 58.590 36.000 0.00 0.00 42.56 1.85
1535 1637 6.881065 ACTCTGCATATCAGCTTTGACTAAAA 59.119 34.615 0.00 0.00 42.56 1.52
1536 1638 7.555554 ACTCTGCATATCAGCTTTGACTAAAAT 59.444 33.333 0.00 0.00 42.56 1.82
1537 1639 7.923888 TCTGCATATCAGCTTTGACTAAAATC 58.076 34.615 0.00 0.00 42.56 2.17
1538 1640 7.553760 TCTGCATATCAGCTTTGACTAAAATCA 59.446 33.333 0.00 0.00 42.56 2.57
1539 1641 8.054152 TGCATATCAGCTTTGACTAAAATCAA 57.946 30.769 0.00 0.00 36.80 2.57
1540 1642 8.522003 TGCATATCAGCTTTGACTAAAATCAAA 58.478 29.630 1.36 1.36 44.40 2.69
1541 1643 8.801913 GCATATCAGCTTTGACTAAAATCAAAC 58.198 33.333 0.00 0.00 42.32 2.93
1627 1729 8.959734 ATGATGTGAAAATATATGCAACGATG 57.040 30.769 0.00 0.00 0.00 3.84
1628 1730 8.152309 TGATGTGAAAATATATGCAACGATGA 57.848 30.769 0.00 0.00 0.00 2.92
1629 1731 8.619546 TGATGTGAAAATATATGCAACGATGAA 58.380 29.630 0.00 0.00 0.00 2.57
1630 1732 9.616634 GATGTGAAAATATATGCAACGATGAAT 57.383 29.630 0.00 0.00 0.00 2.57
1631 1733 9.970395 ATGTGAAAATATATGCAACGATGAATT 57.030 25.926 0.00 0.00 0.00 2.17
1632 1734 9.449550 TGTGAAAATATATGCAACGATGAATTC 57.550 29.630 0.00 0.00 0.00 2.17
1633 1735 9.449550 GTGAAAATATATGCAACGATGAATTCA 57.550 29.630 11.26 11.26 0.00 2.57
1706 1808 5.570234 TGAAGTTGGACTTTACACAAACC 57.430 39.130 0.00 0.00 38.80 3.27
1707 1809 4.399934 TGAAGTTGGACTTTACACAAACCC 59.600 41.667 0.00 0.00 38.80 4.11
1708 1810 3.293337 AGTTGGACTTTACACAAACCCC 58.707 45.455 0.00 0.00 0.00 4.95
1709 1811 2.363038 GTTGGACTTTACACAAACCCCC 59.637 50.000 0.00 0.00 0.00 5.40
1730 1832 7.610580 CCCCCTAATATGCAAAGGAAATAAA 57.389 36.000 8.81 0.00 31.64 1.40
1731 1833 8.028652 CCCCCTAATATGCAAAGGAAATAAAA 57.971 34.615 8.81 0.00 31.64 1.52
1732 1834 8.490311 CCCCCTAATATGCAAAGGAAATAAAAA 58.510 33.333 8.81 0.00 31.64 1.94
1733 1835 9.325198 CCCCTAATATGCAAAGGAAATAAAAAC 57.675 33.333 8.81 0.00 31.64 2.43
1734 1836 9.030301 CCCTAATATGCAAAGGAAATAAAAACG 57.970 33.333 8.81 0.00 31.64 3.60
1735 1837 9.030301 CCTAATATGCAAAGGAAATAAAAACGG 57.970 33.333 0.00 0.00 31.64 4.44
1736 1838 9.796120 CTAATATGCAAAGGAAATAAAAACGGA 57.204 29.630 0.00 0.00 0.00 4.69
1737 1839 8.702163 AATATGCAAAGGAAATAAAAACGGAG 57.298 30.769 0.00 0.00 0.00 4.63
1738 1840 4.877282 TGCAAAGGAAATAAAAACGGAGG 58.123 39.130 0.00 0.00 0.00 4.30
1739 1841 4.585162 TGCAAAGGAAATAAAAACGGAGGA 59.415 37.500 0.00 0.00 0.00 3.71
1740 1842 5.069251 TGCAAAGGAAATAAAAACGGAGGAA 59.931 36.000 0.00 0.00 0.00 3.36
1741 1843 5.633601 GCAAAGGAAATAAAAACGGAGGAAG 59.366 40.000 0.00 0.00 0.00 3.46
1742 1844 6.737622 GCAAAGGAAATAAAAACGGAGGAAGT 60.738 38.462 0.00 0.00 0.00 3.01
1756 1858 4.320202 CGGAGGAAGTACAAACCAACATTG 60.320 45.833 0.00 0.00 0.00 2.82
1763 1865 3.143807 ACAAACCAACATTGACACACG 57.856 42.857 0.00 0.00 0.00 4.49
1764 1866 1.851666 CAAACCAACATTGACACACGC 59.148 47.619 0.00 0.00 0.00 5.34
1768 1870 0.662619 CAACATTGACACACGCCACT 59.337 50.000 0.00 0.00 0.00 4.00
1770 1872 1.388547 ACATTGACACACGCCACTTT 58.611 45.000 0.00 0.00 0.00 2.66
1771 1873 1.748493 ACATTGACACACGCCACTTTT 59.252 42.857 0.00 0.00 0.00 2.27
1772 1874 2.165437 ACATTGACACACGCCACTTTTT 59.835 40.909 0.00 0.00 0.00 1.94
1833 1935 4.404073 AGACAGTGATCCAGTATTCCAGTC 59.596 45.833 0.00 0.00 0.00 3.51
1847 1949 1.021390 CCAGTCGACACAGCCCAATC 61.021 60.000 19.50 0.00 0.00 2.67
1852 1954 1.278985 TCGACACAGCCCAATCATTCT 59.721 47.619 0.00 0.00 0.00 2.40
1853 1955 2.499693 TCGACACAGCCCAATCATTCTA 59.500 45.455 0.00 0.00 0.00 2.10
1874 2086 0.179018 AACTCGATAAGCCATGGCCC 60.179 55.000 33.14 18.05 43.17 5.80
1875 2087 1.669115 CTCGATAAGCCATGGCCCG 60.669 63.158 33.14 27.52 43.17 6.13
1876 2088 2.111043 CGATAAGCCATGGCCCGT 59.889 61.111 33.14 20.57 43.17 5.28
1877 2089 2.253758 CGATAAGCCATGGCCCGTG 61.254 63.158 33.14 15.59 43.17 4.94
1878 2090 1.898574 GATAAGCCATGGCCCGTGG 60.899 63.158 33.14 18.26 42.95 4.94
1879 2091 3.435525 ATAAGCCATGGCCCGTGGG 62.436 63.158 33.14 9.99 40.61 4.61
1900 2112 0.897621 GTGGGCCCAGGAATCAAAAG 59.102 55.000 29.55 0.00 0.00 2.27
1933 2145 4.659172 CACACGGCACCCACCCAT 62.659 66.667 0.00 0.00 0.00 4.00
1979 2191 1.006805 GGATCGTCCCATCAGAGCG 60.007 63.158 0.00 0.00 0.00 5.03
2014 2226 3.411517 CCAAGGCGTCATCCCCCT 61.412 66.667 0.00 0.00 0.00 4.79
2015 2227 2.677228 CAAGGCGTCATCCCCCTT 59.323 61.111 0.00 0.00 39.46 3.95
2038 2250 1.810755 CACTCGTACAGCTGTACTCCA 59.189 52.381 39.83 27.46 46.43 3.86
2049 2265 0.113776 TGTACTCCAACGAGTCCCCT 59.886 55.000 0.00 0.00 46.90 4.79
2054 2270 0.765135 TCCAACGAGTCCCCTTCCAA 60.765 55.000 0.00 0.00 0.00 3.53
2055 2271 0.605589 CCAACGAGTCCCCTTCCAAC 60.606 60.000 0.00 0.00 0.00 3.77
2056 2272 0.605589 CAACGAGTCCCCTTCCAACC 60.606 60.000 0.00 0.00 0.00 3.77
2057 2273 2.108278 AACGAGTCCCCTTCCAACCG 62.108 60.000 0.00 0.00 0.00 4.44
2060 2276 2.047560 GTCCCCTTCCAACCGTCG 60.048 66.667 0.00 0.00 0.00 5.12
2102 2323 2.725637 GGCCCAACGACCCTAATTTAA 58.274 47.619 0.00 0.00 0.00 1.52
2366 2592 3.039988 CCGTGTCGGTGAGTGAGT 58.960 61.111 0.00 0.00 42.73 3.41
2367 2593 1.362717 CCGTGTCGGTGAGTGAGTT 59.637 57.895 0.00 0.00 42.73 3.01
2374 2600 1.481056 CGGTGAGTGAGTTTCCCCCT 61.481 60.000 0.00 0.00 0.00 4.79
2378 2604 1.699634 TGAGTGAGTTTCCCCCTCTTG 59.300 52.381 0.00 0.00 0.00 3.02
2412 2638 4.918201 CCGGGGCTCCTTGCGATC 62.918 72.222 0.00 0.00 44.05 3.69
2429 2655 2.161410 CGATCCCGTTTTGCTGATTCAA 59.839 45.455 0.00 0.00 0.00 2.69
2436 2662 3.426525 CGTTTTGCTGATTCAAGGCTTTC 59.573 43.478 0.00 0.00 0.00 2.62
2437 2663 2.995466 TTGCTGATTCAAGGCTTTCG 57.005 45.000 0.00 0.00 0.00 3.46
2438 2664 1.896220 TGCTGATTCAAGGCTTTCGT 58.104 45.000 0.00 0.00 0.00 3.85
2443 2671 1.250840 ATTCAAGGCTTTCGTGGGGC 61.251 55.000 0.00 0.00 0.00 5.80
2462 2690 2.247437 GCGGCAGATCGGTGATTCC 61.247 63.158 0.00 0.00 0.00 3.01
2581 2973 1.064758 TGGCCAGACCGCAGAATTATT 60.065 47.619 0.00 0.00 43.94 1.40
2583 2975 3.211045 GGCCAGACCGCAGAATTATTTA 58.789 45.455 0.00 0.00 0.00 1.40
2584 2976 3.821033 GGCCAGACCGCAGAATTATTTAT 59.179 43.478 0.00 0.00 0.00 1.40
2585 2977 4.083271 GGCCAGACCGCAGAATTATTTATC 60.083 45.833 0.00 0.00 0.00 1.75
2586 2978 4.757149 GCCAGACCGCAGAATTATTTATCT 59.243 41.667 0.00 0.00 0.00 1.98
2587 2979 5.334414 GCCAGACCGCAGAATTATTTATCTG 60.334 44.000 0.00 0.00 44.66 2.90
2588 2980 5.760253 CCAGACCGCAGAATTATTTATCTGT 59.240 40.000 4.87 0.00 43.91 3.41
2594 2986 5.207768 GCAGAATTATTTATCTGTGGCGTG 58.792 41.667 4.87 0.00 43.91 5.34
2608 3000 0.242017 GGCGTGCTGAATTTCTGCTT 59.758 50.000 23.32 0.00 41.21 3.91
2664 3057 1.440353 GTGACGCCGTGCACAAATC 60.440 57.895 18.64 8.90 35.19 2.17
2679 3072 6.142958 GTGCACAAATCAGAAGTTTTTAGAGC 59.857 38.462 13.17 0.00 0.00 4.09
2820 3217 0.445436 GTGCATGGCTCTGTTCTTCG 59.555 55.000 0.00 0.00 0.00 3.79
2906 3305 3.756434 TGTGCGATTCTTTTAAGGAAGGG 59.244 43.478 0.00 0.00 0.00 3.95
2908 3307 4.457949 GTGCGATTCTTTTAAGGAAGGGAA 59.542 41.667 0.00 0.00 0.00 3.97
2909 3308 4.457949 TGCGATTCTTTTAAGGAAGGGAAC 59.542 41.667 0.00 0.00 0.00 3.62
2922 3321 3.881089 GGAAGGGAACGGTGTAATTATGG 59.119 47.826 0.00 0.00 0.00 2.74
2964 3364 6.385033 TCTGTCGCACTGATATATGATTCAG 58.615 40.000 9.39 9.39 43.97 3.02
2994 3394 4.717233 TTGTTGTGATGCACTGTTTTCT 57.283 36.364 0.00 0.00 35.11 2.52
2995 3395 5.826601 TTGTTGTGATGCACTGTTTTCTA 57.173 34.783 0.00 0.00 35.11 2.10
3015 3415 7.414222 TTCTACTGGGAAACACTACGATAAT 57.586 36.000 0.00 0.00 0.00 1.28
3017 3417 8.523915 TCTACTGGGAAACACTACGATAATTA 57.476 34.615 0.00 0.00 0.00 1.40
3021 3422 9.139734 ACTGGGAAACACTACGATAATTAGATA 57.860 33.333 0.00 0.00 0.00 1.98
3100 3501 4.927267 TGGGACAGTTACTCATGGATTT 57.073 40.909 0.00 0.00 0.00 2.17
3104 3512 6.049790 GGGACAGTTACTCATGGATTTCTAC 58.950 44.000 0.00 0.00 0.00 2.59
3109 3517 6.473778 CAGTTACTCATGGATTTCTACTGTCG 59.526 42.308 0.00 0.00 0.00 4.35
3115 3523 7.014711 ACTCATGGATTTCTACTGTCGATATGT 59.985 37.037 0.00 0.00 0.00 2.29
3144 3552 7.110155 TGATTAGTTCCAGTTTAGCCCTTTAG 58.890 38.462 0.00 0.00 0.00 1.85
3156 3564 1.296715 CCTTTAGGCTGTCGGCTGT 59.703 57.895 3.10 0.00 46.70 4.40
3221 3629 4.436718 GGGCACACATTTTGTTTTGTTGAC 60.437 41.667 0.00 0.00 35.67 3.18
3228 3636 9.651913 ACACATTTTGTTTTGTTGACTATTCTT 57.348 25.926 0.00 0.00 33.09 2.52
3277 3685 6.537453 ACTGTGTAGTGCTATCTCTGAAAT 57.463 37.500 0.00 0.00 35.34 2.17
3296 3704 7.750458 TCTGAAATCGAAATGAAATGCTAACAC 59.250 33.333 0.00 0.00 0.00 3.32
3298 3706 7.325821 TGAAATCGAAATGAAATGCTAACACAC 59.674 33.333 0.00 0.00 0.00 3.82
3300 3708 5.688823 TCGAAATGAAATGCTAACACACAG 58.311 37.500 0.00 0.00 0.00 3.66
3305 3713 3.243367 TGAAATGCTAACACACAGGCAAC 60.243 43.478 0.00 0.00 38.21 4.17
3325 3733 2.292267 CGCAGTAGGCCTGAAATGAAT 58.708 47.619 17.99 0.00 44.49 2.57
3326 3734 2.032550 CGCAGTAGGCCTGAAATGAATG 59.967 50.000 17.99 4.54 44.49 2.67
3333 3741 4.634199 AGGCCTGAAATGAATGTTTTGTG 58.366 39.130 3.11 0.00 0.00 3.33
3336 3744 5.178067 GGCCTGAAATGAATGTTTTGTGAAG 59.822 40.000 0.00 0.00 0.00 3.02
3369 3777 6.039616 GTGCTGGAAAACACTGAATTTTACA 58.960 36.000 6.10 6.10 37.50 2.41
3412 3820 4.398358 AGAGCATGATTGGTTTGATGTCAG 59.602 41.667 0.00 0.00 32.62 3.51
3451 3859 7.277539 TCAAAAGTTGCCAAAAGTTGATAACTG 59.722 33.333 9.19 2.30 41.91 3.16
3452 3860 5.852282 AGTTGCCAAAAGTTGATAACTGT 57.148 34.783 8.20 0.00 41.91 3.55
3453 3861 6.220726 AGTTGCCAAAAGTTGATAACTGTT 57.779 33.333 0.00 0.00 41.91 3.16
3454 3862 6.273071 AGTTGCCAAAAGTTGATAACTGTTC 58.727 36.000 0.00 0.00 41.91 3.18
3474 3882 5.468072 TGTTCTGAGATCAGCAAGAAAAGTC 59.532 40.000 4.92 0.00 43.46 3.01
3476 3884 3.329386 TGAGATCAGCAAGAAAAGTCGG 58.671 45.455 0.00 0.00 0.00 4.79
3499 3907 0.249911 CCAACCTATCACTAGCCGGC 60.250 60.000 21.89 21.89 0.00 6.13
3507 3915 1.825191 CACTAGCCGGCATGCCAAT 60.825 57.895 34.93 21.93 35.37 3.16
3550 3958 8.948631 TCGTGCTCTAAATCTTTGATTTATCT 57.051 30.769 11.59 0.00 0.00 1.98
3644 4053 3.130516 TCTCATGTACTACAAAGGCCTCG 59.869 47.826 5.23 2.40 0.00 4.63
3645 4054 3.093814 TCATGTACTACAAAGGCCTCGA 58.906 45.455 5.23 0.00 0.00 4.04
3646 4055 3.119245 TCATGTACTACAAAGGCCTCGAC 60.119 47.826 5.23 0.00 0.00 4.20
3782 4191 6.259167 TCAAGCAACGAAACTATGTGTAAGTT 59.741 34.615 0.00 0.00 38.82 2.66
3789 4198 9.647797 AACGAAACTATGTGTAAGTTGATCATA 57.352 29.630 0.00 0.00 37.26 2.15
3790 4199 9.817809 ACGAAACTATGTGTAAGTTGATCATAT 57.182 29.630 0.00 0.00 37.26 1.78
3799 4208 9.696917 TGTGTAAGTTGATCATATAGTGCATAG 57.303 33.333 0.00 0.00 0.00 2.23
3968 4381 6.462073 TCTTCGTAATTTTCACTGTACTGC 57.538 37.500 0.00 0.00 0.00 4.40
3983 4396 5.885912 ACTGTACTGCCCCTTATTTGTATTG 59.114 40.000 0.00 0.00 0.00 1.90
4188 4601 7.887996 TTTAAAGCAATGCAGTTTCTATTGG 57.112 32.000 8.35 0.00 33.54 3.16
4192 4605 3.385755 GCAATGCAGTTTCTATTGGGGAT 59.614 43.478 0.00 0.00 33.54 3.85
4247 4660 1.821753 GGAGCTTCAGAGACTACTGCA 59.178 52.381 0.00 0.00 37.75 4.41
4329 4742 7.344093 TCATTTTTATTTCCTCCCATGCATGTA 59.656 33.333 24.58 11.83 0.00 2.29
4451 4864 5.282055 TCCAGGCACTAATGAGTATGAAG 57.718 43.478 0.00 0.00 36.02 3.02
4469 4882 5.624344 TGAAGAGTAAGAAAGACGATCGT 57.376 39.130 22.97 22.97 0.00 3.73
4505 4918 6.435591 ACAATTCTCTTCCCATTTCTCCTTTC 59.564 38.462 0.00 0.00 0.00 2.62
4755 5169 3.877559 TCCAGAGTAGTGCATTGGATTG 58.122 45.455 0.00 0.00 33.21 2.67
4766 5180 2.416431 GCATTGGATTGGTCTCTTGCAC 60.416 50.000 0.00 0.00 0.00 4.57
4826 5243 3.254166 AGCATGCACTCAAGGTTACTTTG 59.746 43.478 21.98 0.50 33.81 2.77
4964 5381 6.582677 TCAATGTACGGTTCCATGAAATTT 57.417 33.333 0.00 0.00 0.00 1.82
5150 5573 3.714798 TGAACCTTCATGGGGGATACTAC 59.285 47.826 10.95 0.00 41.11 2.73
5263 5686 4.728772 ACCTGGTCTTGATCAATGAACAA 58.271 39.130 19.45 5.83 0.00 2.83
5298 5721 4.241681 CTCTGGTAAAGTTCACTCTGCTC 58.758 47.826 0.00 0.00 0.00 4.26
5374 5797 3.500448 TGCTCCAGGTTGTATTGACAA 57.500 42.857 0.00 0.00 43.41 3.18
5408 5831 2.420022 CACTGCAGAGGAATAAAACCGG 59.580 50.000 23.35 0.00 0.00 5.28
5423 5846 5.447624 AAAACCGGAATGGAGTAAAGTTG 57.552 39.130 9.46 0.00 42.00 3.16
5445 5868 4.390603 TGGACACAGCGAACAATACATTAC 59.609 41.667 0.00 0.00 0.00 1.89
5495 5918 3.174375 GACAAAGCGAATTCAATCCAGC 58.826 45.455 6.22 0.00 0.00 4.85
5500 5923 1.533338 GCGAATTCAATCCAGCTGCTG 60.533 52.381 22.44 22.44 0.00 4.41
5507 5930 0.321564 AATCCAGCTGCTGTGCGTTA 60.322 50.000 26.41 6.69 38.13 3.18
5527 5950 6.418226 GCGTTATCTGTCTAGAATCGTGAAAT 59.582 38.462 0.00 0.00 36.32 2.17
5534 5957 1.064134 GAATCGTGAAATGGCGGCC 59.936 57.895 13.32 13.32 0.00 6.13
5569 5992 6.536941 GCAAAACCATAGTCAAAGGAAACAAA 59.463 34.615 0.00 0.00 0.00 2.83
5584 6007 5.658190 AGGAAACAAATGTATAATGCTGCCT 59.342 36.000 0.00 0.00 0.00 4.75
5700 6123 9.480053 AGTGTATAATTATTTTGAATGCATGCC 57.520 29.630 16.68 0.00 0.00 4.40
5744 6167 6.044046 TGTGATGCAATGCTATTTTGAATCC 58.956 36.000 6.82 0.00 38.05 3.01
5749 6172 4.976116 GCAATGCTATTTTGAATCCGTACC 59.024 41.667 0.00 0.00 0.00 3.34
5761 6184 1.255882 TCCGTACCGCTTCCTTTGTA 58.744 50.000 0.00 0.00 0.00 2.41
5762 6185 1.067635 TCCGTACCGCTTCCTTTGTAC 60.068 52.381 0.00 0.00 0.00 2.90
5763 6186 1.067354 CCGTACCGCTTCCTTTGTACT 60.067 52.381 0.00 0.00 33.17 2.73
5764 6187 2.257034 CGTACCGCTTCCTTTGTACTC 58.743 52.381 0.00 0.00 33.17 2.59
5767 6190 1.692519 ACCGCTTCCTTTGTACTCTGT 59.307 47.619 0.00 0.00 0.00 3.41
5768 6191 2.288886 ACCGCTTCCTTTGTACTCTGTC 60.289 50.000 0.00 0.00 0.00 3.51
5769 6192 2.338500 CGCTTCCTTTGTACTCTGTCC 58.662 52.381 0.00 0.00 0.00 4.02
5770 6193 2.701107 GCTTCCTTTGTACTCTGTCCC 58.299 52.381 0.00 0.00 0.00 4.46
5771 6194 2.038557 GCTTCCTTTGTACTCTGTCCCA 59.961 50.000 0.00 0.00 0.00 4.37
5772 6195 3.307762 GCTTCCTTTGTACTCTGTCCCAT 60.308 47.826 0.00 0.00 0.00 4.00
5773 6196 4.081087 GCTTCCTTTGTACTCTGTCCCATA 60.081 45.833 0.00 0.00 0.00 2.74
5774 6197 5.570844 GCTTCCTTTGTACTCTGTCCCATAA 60.571 44.000 0.00 0.00 0.00 1.90
5775 6198 6.636454 TTCCTTTGTACTCTGTCCCATAAT 57.364 37.500 0.00 0.00 0.00 1.28
5776 6199 7.635089 GCTTCCTTTGTACTCTGTCCCATAATA 60.635 40.741 0.00 0.00 0.00 0.98
5777 6200 7.931015 TCCTTTGTACTCTGTCCCATAATAT 57.069 36.000 0.00 0.00 0.00 1.28
5780 6203 9.712305 CCTTTGTACTCTGTCCCATAATATAAG 57.288 37.037 0.00 0.00 0.00 1.73
5786 6209 8.554490 ACTCTGTCCCATAATATAAGAGTGTT 57.446 34.615 1.84 0.00 40.90 3.32
5787 6210 8.993424 ACTCTGTCCCATAATATAAGAGTGTTT 58.007 33.333 1.84 0.00 40.90 2.83
5788 6211 9.838339 CTCTGTCCCATAATATAAGAGTGTTTT 57.162 33.333 0.00 0.00 0.00 2.43
5791 6214 9.967451 TGTCCCATAATATAAGAGTGTTTTTGA 57.033 29.630 0.00 0.00 0.00 2.69
5793 6216 9.967451 TCCCATAATATAAGAGTGTTTTTGACA 57.033 29.630 0.00 0.00 35.42 3.58
5810 6233 2.319472 GACATTTGTCAAAAGCGCTCC 58.681 47.619 12.06 0.00 44.18 4.70
5811 6234 1.956477 ACATTTGTCAAAAGCGCTCCT 59.044 42.857 12.06 0.00 0.00 3.69
5812 6235 3.146066 ACATTTGTCAAAAGCGCTCCTA 58.854 40.909 12.06 0.00 0.00 2.94
5813 6236 3.758554 ACATTTGTCAAAAGCGCTCCTAT 59.241 39.130 12.06 0.00 0.00 2.57
5814 6237 4.941263 ACATTTGTCAAAAGCGCTCCTATA 59.059 37.500 12.06 0.00 0.00 1.31
5815 6238 5.590259 ACATTTGTCAAAAGCGCTCCTATAT 59.410 36.000 12.06 0.00 0.00 0.86
5816 6239 6.095440 ACATTTGTCAAAAGCGCTCCTATATT 59.905 34.615 12.06 0.00 0.00 1.28
5817 6240 7.282224 ACATTTGTCAAAAGCGCTCCTATATTA 59.718 33.333 12.06 0.00 0.00 0.98
5818 6241 6.598753 TTGTCAAAAGCGCTCCTATATTAC 57.401 37.500 12.06 2.04 0.00 1.89
5819 6242 4.743151 TGTCAAAAGCGCTCCTATATTACG 59.257 41.667 12.06 0.00 0.00 3.18
5820 6243 4.150098 GTCAAAAGCGCTCCTATATTACGG 59.850 45.833 12.06 0.00 0.00 4.02
5821 6244 3.314541 AAAGCGCTCCTATATTACGGG 57.685 47.619 12.06 0.00 0.00 5.28
5822 6245 2.211250 AGCGCTCCTATATTACGGGA 57.789 50.000 2.64 0.00 0.00 5.14
5823 6246 2.522185 AGCGCTCCTATATTACGGGAA 58.478 47.619 2.64 0.00 0.00 3.97
5824 6247 2.492484 AGCGCTCCTATATTACGGGAAG 59.508 50.000 2.64 0.00 0.00 3.46
5825 6248 2.416972 GCGCTCCTATATTACGGGAAGG 60.417 54.545 0.00 0.00 0.00 3.46
5826 6249 3.087031 CGCTCCTATATTACGGGAAGGA 58.913 50.000 0.00 0.00 35.14 3.36
5829 6252 4.024670 CTCCTATATTACGGGAAGGAGGG 58.975 52.174 8.52 0.00 46.37 4.30
5835 6258 1.302907 TACGGGAAGGAGGGAGTAGT 58.697 55.000 0.00 0.00 0.00 2.73
5841 6264 3.118223 GGGAAGGAGGGAGTAGTTCATTG 60.118 52.174 0.00 0.00 0.00 2.82
5873 6312 9.770097 CCTATTTATTTCTGTTATCTGAGAGCA 57.230 33.333 0.00 0.00 0.00 4.26
5908 6349 5.047021 CCTCCTTTTCATGACTCTGTACTGA 60.047 44.000 0.00 2.21 0.00 3.41
5928 6369 6.106673 ACTGATAAGATTCCAAACGGTACTG 58.893 40.000 0.00 0.00 0.00 2.74
5985 6426 3.986572 CAGCAACTCTCTGTTCTACAGTG 59.013 47.826 6.71 4.89 46.03 3.66
5986 6427 2.734079 GCAACTCTCTGTTCTACAGTGC 59.266 50.000 6.71 5.42 46.03 4.40
6034 6476 5.253330 GGTTGATGTGTTAAATCCAGAGGA 58.747 41.667 0.00 0.00 35.55 3.71
6131 6576 2.224018 GGTTCAGTGATTGCAAAGCCAA 60.224 45.455 1.71 0.00 0.00 4.52
6138 6583 2.300723 TGATTGCAAAGCCAAGCTGAAT 59.699 40.909 1.71 0.00 39.62 2.57
6139 6584 2.443887 TTGCAAAGCCAAGCTGAATC 57.556 45.000 0.00 0.00 39.62 2.52
6163 6608 8.610248 TCGGAAAACACAGATCAAACTAAATA 57.390 30.769 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.485947 TGTTGAATATGCGGCTGTTTC 57.514 42.857 0.00 2.23 0.00 2.78
2 3 3.005261 TGTTGTTGAATATGCGGCTGTTT 59.995 39.130 0.00 0.00 0.00 2.83
4 5 2.158559 TGTTGTTGAATATGCGGCTGT 58.841 42.857 0.00 0.00 0.00 4.40
5 6 2.917701 TGTTGTTGAATATGCGGCTG 57.082 45.000 0.00 0.00 0.00 4.85
6 7 2.164219 CCTTGTTGTTGAATATGCGGCT 59.836 45.455 0.00 0.00 0.00 5.52
8 9 2.094803 TGCCTTGTTGTTGAATATGCGG 60.095 45.455 0.00 0.00 0.00 5.69
9 10 3.214697 TGCCTTGTTGTTGAATATGCG 57.785 42.857 0.00 0.00 0.00 4.73
10 11 4.152223 GGTTTGCCTTGTTGTTGAATATGC 59.848 41.667 0.00 0.00 0.00 3.14
11 12 5.177327 GTGGTTTGCCTTGTTGTTGAATATG 59.823 40.000 0.00 0.00 35.27 1.78
12 13 5.070313 AGTGGTTTGCCTTGTTGTTGAATAT 59.930 36.000 0.00 0.00 35.27 1.28
13 14 4.404073 AGTGGTTTGCCTTGTTGTTGAATA 59.596 37.500 0.00 0.00 35.27 1.75
14 15 3.197549 AGTGGTTTGCCTTGTTGTTGAAT 59.802 39.130 0.00 0.00 35.27 2.57
15 16 2.564947 AGTGGTTTGCCTTGTTGTTGAA 59.435 40.909 0.00 0.00 35.27 2.69
16 17 2.175202 AGTGGTTTGCCTTGTTGTTGA 58.825 42.857 0.00 0.00 35.27 3.18
17 18 2.671130 AGTGGTTTGCCTTGTTGTTG 57.329 45.000 0.00 0.00 35.27 3.33
18 19 3.260632 AGAAAGTGGTTTGCCTTGTTGTT 59.739 39.130 0.00 0.00 35.27 2.83
19 20 2.831526 AGAAAGTGGTTTGCCTTGTTGT 59.168 40.909 0.00 0.00 35.27 3.32
20 21 3.119173 TCAGAAAGTGGTTTGCCTTGTTG 60.119 43.478 0.00 0.00 35.27 3.33
21 22 3.096092 TCAGAAAGTGGTTTGCCTTGTT 58.904 40.909 0.00 0.00 35.27 2.83
22 23 2.733956 TCAGAAAGTGGTTTGCCTTGT 58.266 42.857 0.00 0.00 35.27 3.16
23 24 3.491447 CCTTCAGAAAGTGGTTTGCCTTG 60.491 47.826 0.00 0.00 35.27 3.61
24 25 2.695147 CCTTCAGAAAGTGGTTTGCCTT 59.305 45.455 0.00 0.00 35.27 4.35
25 26 2.310538 CCTTCAGAAAGTGGTTTGCCT 58.689 47.619 0.00 0.00 35.27 4.75
26 27 2.031870 ACCTTCAGAAAGTGGTTTGCC 58.968 47.619 0.00 0.00 0.00 4.52
27 28 2.287009 CGACCTTCAGAAAGTGGTTTGC 60.287 50.000 0.00 0.00 32.30 3.68
28 29 2.287009 GCGACCTTCAGAAAGTGGTTTG 60.287 50.000 0.00 0.00 32.30 2.93
29 30 1.947456 GCGACCTTCAGAAAGTGGTTT 59.053 47.619 0.00 0.00 32.30 3.27
30 31 1.141053 AGCGACCTTCAGAAAGTGGTT 59.859 47.619 0.00 0.00 32.30 3.67
31 32 0.759346 AGCGACCTTCAGAAAGTGGT 59.241 50.000 0.00 0.00 35.23 4.16
32 33 1.151668 CAGCGACCTTCAGAAAGTGG 58.848 55.000 0.00 0.00 0.00 4.00
33 34 2.064762 CTCAGCGACCTTCAGAAAGTG 58.935 52.381 0.00 0.00 0.00 3.16
34 35 1.964223 TCTCAGCGACCTTCAGAAAGT 59.036 47.619 0.00 0.00 0.00 2.66
35 36 2.732412 TCTCAGCGACCTTCAGAAAG 57.268 50.000 0.00 0.00 0.00 2.62
36 37 2.102420 TGTTCTCAGCGACCTTCAGAAA 59.898 45.455 0.00 0.00 0.00 2.52
37 38 1.686587 TGTTCTCAGCGACCTTCAGAA 59.313 47.619 0.00 0.00 0.00 3.02
38 39 1.328279 TGTTCTCAGCGACCTTCAGA 58.672 50.000 0.00 0.00 0.00 3.27
39 40 2.376808 ATGTTCTCAGCGACCTTCAG 57.623 50.000 0.00 0.00 0.00 3.02
40 41 2.839486 AATGTTCTCAGCGACCTTCA 57.161 45.000 0.00 0.00 0.00 3.02
41 42 4.433615 TGATAATGTTCTCAGCGACCTTC 58.566 43.478 0.00 0.00 0.00 3.46
42 43 4.471904 TGATAATGTTCTCAGCGACCTT 57.528 40.909 0.00 0.00 0.00 3.50
43 44 4.471904 TTGATAATGTTCTCAGCGACCT 57.528 40.909 0.00 0.00 0.00 3.85
44 45 4.811024 TCATTGATAATGTTCTCAGCGACC 59.189 41.667 1.92 0.00 39.87 4.79
45 46 5.557893 GCTCATTGATAATGTTCTCAGCGAC 60.558 44.000 1.92 0.00 39.87 5.19
46 47 4.509230 GCTCATTGATAATGTTCTCAGCGA 59.491 41.667 1.92 0.00 39.87 4.93
47 48 4.510711 AGCTCATTGATAATGTTCTCAGCG 59.489 41.667 1.92 0.00 39.87 5.18
48 49 5.526479 TCAGCTCATTGATAATGTTCTCAGC 59.474 40.000 1.92 3.55 39.87 4.26
49 50 7.549615 TTCAGCTCATTGATAATGTTCTCAG 57.450 36.000 1.92 0.00 39.87 3.35
50 51 8.515695 AATTCAGCTCATTGATAATGTTCTCA 57.484 30.769 1.92 0.00 39.87 3.27
51 52 8.838365 AGAATTCAGCTCATTGATAATGTTCTC 58.162 33.333 8.44 0.00 39.87 2.87
52 53 8.749026 AGAATTCAGCTCATTGATAATGTTCT 57.251 30.769 8.44 0.25 39.87 3.01
53 54 9.234384 CAAGAATTCAGCTCATTGATAATGTTC 57.766 33.333 8.44 0.00 39.87 3.18
54 55 8.195436 CCAAGAATTCAGCTCATTGATAATGTT 58.805 33.333 8.44 0.00 39.87 2.71
55 56 7.558807 TCCAAGAATTCAGCTCATTGATAATGT 59.441 33.333 8.44 0.00 39.87 2.71
56 57 7.937649 TCCAAGAATTCAGCTCATTGATAATG 58.062 34.615 8.44 0.00 40.28 1.90
57 58 7.997223 TCTCCAAGAATTCAGCTCATTGATAAT 59.003 33.333 8.44 0.00 0.00 1.28
58 59 7.341030 TCTCCAAGAATTCAGCTCATTGATAA 58.659 34.615 8.44 0.00 0.00 1.75
59 60 6.892485 TCTCCAAGAATTCAGCTCATTGATA 58.108 36.000 8.44 0.00 0.00 2.15
60 61 5.752650 TCTCCAAGAATTCAGCTCATTGAT 58.247 37.500 8.44 0.00 0.00 2.57
61 62 5.169992 TCTCCAAGAATTCAGCTCATTGA 57.830 39.130 8.44 0.00 0.00 2.57
62 63 5.892160 TTCTCCAAGAATTCAGCTCATTG 57.108 39.130 8.44 2.21 0.00 2.82
63 64 5.296283 CGATTCTCCAAGAATTCAGCTCATT 59.704 40.000 8.44 0.00 44.41 2.57
64 65 4.815308 CGATTCTCCAAGAATTCAGCTCAT 59.185 41.667 8.44 0.00 44.41 2.90
65 66 4.186926 CGATTCTCCAAGAATTCAGCTCA 58.813 43.478 8.44 0.00 44.41 4.26
66 67 3.002144 GCGATTCTCCAAGAATTCAGCTC 59.998 47.826 8.44 0.00 44.41 4.09
67 68 2.941720 GCGATTCTCCAAGAATTCAGCT 59.058 45.455 8.44 0.00 44.41 4.24
68 69 2.941720 AGCGATTCTCCAAGAATTCAGC 59.058 45.455 8.44 9.53 44.41 4.26
69 70 3.311871 CCAGCGATTCTCCAAGAATTCAG 59.688 47.826 8.44 0.00 44.41 3.02
70 71 3.055167 TCCAGCGATTCTCCAAGAATTCA 60.055 43.478 8.44 0.00 44.41 2.57
71 72 3.535561 TCCAGCGATTCTCCAAGAATTC 58.464 45.455 0.00 0.00 44.41 2.17
72 73 3.634397 TCCAGCGATTCTCCAAGAATT 57.366 42.857 3.85 0.00 44.41 2.17
73 74 3.853355 ATCCAGCGATTCTCCAAGAAT 57.147 42.857 1.92 1.92 46.84 2.40
74 75 3.634397 AATCCAGCGATTCTCCAAGAA 57.366 42.857 0.00 0.00 38.78 2.52
83 84 2.019984 GCTCCTTTGAATCCAGCGATT 58.980 47.619 0.00 0.00 41.57 3.34
84 85 1.065199 TGCTCCTTTGAATCCAGCGAT 60.065 47.619 0.00 0.00 32.43 4.58
85 86 0.324614 TGCTCCTTTGAATCCAGCGA 59.675 50.000 0.00 0.00 32.43 4.93
86 87 0.449388 GTGCTCCTTTGAATCCAGCG 59.551 55.000 0.00 0.00 32.43 5.18
87 88 1.538047 TGTGCTCCTTTGAATCCAGC 58.462 50.000 0.00 0.00 0.00 4.85
88 89 3.119245 CCATTGTGCTCCTTTGAATCCAG 60.119 47.826 0.00 0.00 0.00 3.86
89 90 2.827322 CCATTGTGCTCCTTTGAATCCA 59.173 45.455 0.00 0.00 0.00 3.41
90 91 3.091545 TCCATTGTGCTCCTTTGAATCC 58.908 45.455 0.00 0.00 0.00 3.01
91 92 3.507233 TGTCCATTGTGCTCCTTTGAATC 59.493 43.478 0.00 0.00 0.00 2.52
92 93 3.499338 TGTCCATTGTGCTCCTTTGAAT 58.501 40.909 0.00 0.00 0.00 2.57
93 94 2.886523 CTGTCCATTGTGCTCCTTTGAA 59.113 45.455 0.00 0.00 0.00 2.69
94 95 2.507484 CTGTCCATTGTGCTCCTTTGA 58.493 47.619 0.00 0.00 0.00 2.69
95 96 1.542915 CCTGTCCATTGTGCTCCTTTG 59.457 52.381 0.00 0.00 0.00 2.77
96 97 1.915141 CCTGTCCATTGTGCTCCTTT 58.085 50.000 0.00 0.00 0.00 3.11
97 98 0.610232 GCCTGTCCATTGTGCTCCTT 60.610 55.000 0.00 0.00 0.00 3.36
98 99 1.001641 GCCTGTCCATTGTGCTCCT 60.002 57.895 0.00 0.00 0.00 3.69
99 100 2.401766 CGCCTGTCCATTGTGCTCC 61.402 63.158 0.00 0.00 0.00 4.70
100 101 3.044059 GCGCCTGTCCATTGTGCTC 62.044 63.158 0.00 0.00 32.93 4.26
101 102 3.058160 GCGCCTGTCCATTGTGCT 61.058 61.111 0.00 0.00 32.93 4.40
102 103 4.465512 CGCGCCTGTCCATTGTGC 62.466 66.667 0.00 0.00 0.00 4.57
103 104 2.741985 TCGCGCCTGTCCATTGTG 60.742 61.111 0.00 0.00 0.00 3.33
104 105 2.244117 ATCTCGCGCCTGTCCATTGT 62.244 55.000 0.00 0.00 0.00 2.71
105 106 0.249447 TATCTCGCGCCTGTCCATTG 60.249 55.000 0.00 0.00 0.00 2.82
106 107 0.464036 TTATCTCGCGCCTGTCCATT 59.536 50.000 0.00 0.00 0.00 3.16
107 108 0.681733 ATTATCTCGCGCCTGTCCAT 59.318 50.000 0.00 0.00 0.00 3.41
108 109 0.464036 AATTATCTCGCGCCTGTCCA 59.536 50.000 0.00 0.00 0.00 4.02
109 110 1.527311 GAAATTATCTCGCGCCTGTCC 59.473 52.381 0.00 0.00 0.00 4.02
110 111 2.474816 AGAAATTATCTCGCGCCTGTC 58.525 47.619 0.00 0.00 30.46 3.51
111 112 2.604046 AGAAATTATCTCGCGCCTGT 57.396 45.000 0.00 0.00 30.46 4.00
112 113 3.557595 AGAAAGAAATTATCTCGCGCCTG 59.442 43.478 0.00 0.00 37.42 4.85
113 114 3.798202 AGAAAGAAATTATCTCGCGCCT 58.202 40.909 0.00 0.00 37.42 5.52
114 115 4.537936 AAGAAAGAAATTATCTCGCGCC 57.462 40.909 0.00 0.00 37.42 6.53
115 116 5.801012 AGAAAGAAAGAAATTATCTCGCGC 58.199 37.500 0.00 0.00 37.42 6.86
116 117 8.171840 AGAAAGAAAGAAAGAAATTATCTCGCG 58.828 33.333 0.00 0.00 37.42 5.87
117 118 9.833182 AAGAAAGAAAGAAAGAAATTATCTCGC 57.167 29.630 0.00 0.00 37.42 5.03
150 151 9.595823 GGAAAAGCTATACAAATGTACACTAGA 57.404 33.333 0.00 0.00 32.72 2.43
151 152 9.601217 AGGAAAAGCTATACAAATGTACACTAG 57.399 33.333 0.00 0.00 32.72 2.57
152 153 9.953565 AAGGAAAAGCTATACAAATGTACACTA 57.046 29.630 0.00 0.00 32.72 2.74
153 154 8.863872 AAGGAAAAGCTATACAAATGTACACT 57.136 30.769 0.00 0.00 32.72 3.55
154 155 8.182227 GGAAGGAAAAGCTATACAAATGTACAC 58.818 37.037 0.00 0.00 32.72 2.90
155 156 7.338449 GGGAAGGAAAAGCTATACAAATGTACA 59.662 37.037 0.00 0.00 32.72 2.90
156 157 7.201794 GGGGAAGGAAAAGCTATACAAATGTAC 60.202 40.741 0.00 0.00 32.72 2.90
157 158 6.831868 GGGGAAGGAAAAGCTATACAAATGTA 59.168 38.462 0.00 0.00 34.67 2.29
158 159 5.656859 GGGGAAGGAAAAGCTATACAAATGT 59.343 40.000 0.00 0.00 0.00 2.71
159 160 5.893824 AGGGGAAGGAAAAGCTATACAAATG 59.106 40.000 0.00 0.00 0.00 2.32
160 161 6.092346 AGGGGAAGGAAAAGCTATACAAAT 57.908 37.500 0.00 0.00 0.00 2.32
161 162 5.530176 AGGGGAAGGAAAAGCTATACAAA 57.470 39.130 0.00 0.00 0.00 2.83
162 163 5.530176 AAGGGGAAGGAAAAGCTATACAA 57.470 39.130 0.00 0.00 0.00 2.41
163 164 5.253096 AGAAAGGGGAAGGAAAAGCTATACA 59.747 40.000 0.00 0.00 0.00 2.29
164 165 5.590663 CAGAAAGGGGAAGGAAAAGCTATAC 59.409 44.000 0.00 0.00 0.00 1.47
165 166 5.340027 CCAGAAAGGGGAAGGAAAAGCTATA 60.340 44.000 0.00 0.00 0.00 1.31
166 167 4.570719 CCAGAAAGGGGAAGGAAAAGCTAT 60.571 45.833 0.00 0.00 0.00 2.97
167 168 3.245264 CCAGAAAGGGGAAGGAAAAGCTA 60.245 47.826 0.00 0.00 0.00 3.32
168 169 2.491640 CCAGAAAGGGGAAGGAAAAGCT 60.492 50.000 0.00 0.00 0.00 3.74
169 170 1.895798 CCAGAAAGGGGAAGGAAAAGC 59.104 52.381 0.00 0.00 0.00 3.51
170 171 1.895798 GCCAGAAAGGGGAAGGAAAAG 59.104 52.381 0.00 0.00 38.09 2.27
171 172 1.482365 GGCCAGAAAGGGGAAGGAAAA 60.482 52.381 0.00 0.00 38.09 2.29
172 173 0.114364 GGCCAGAAAGGGGAAGGAAA 59.886 55.000 0.00 0.00 38.09 3.13
173 174 0.776080 AGGCCAGAAAGGGGAAGGAA 60.776 55.000 5.01 0.00 38.09 3.36
174 175 0.776080 AAGGCCAGAAAGGGGAAGGA 60.776 55.000 5.01 0.00 38.09 3.36
175 176 0.323816 GAAGGCCAGAAAGGGGAAGG 60.324 60.000 5.01 0.00 38.09 3.46
176 177 0.405585 TGAAGGCCAGAAAGGGGAAG 59.594 55.000 5.01 0.00 38.09 3.46
177 178 0.405585 CTGAAGGCCAGAAAGGGGAA 59.594 55.000 5.01 0.00 45.78 3.97
178 179 2.078452 CTGAAGGCCAGAAAGGGGA 58.922 57.895 5.01 0.00 45.78 4.81
179 180 1.680314 GCTGAAGGCCAGAAAGGGG 60.680 63.158 5.01 0.00 45.78 4.79
180 181 4.009015 GCTGAAGGCCAGAAAGGG 57.991 61.111 5.01 0.00 45.78 3.95
189 190 2.035442 GTTCAGGACGGCTGAAGGC 61.035 63.158 0.00 0.00 40.89 4.35
190 191 1.376037 GGTTCAGGACGGCTGAAGG 60.376 63.158 0.00 0.00 40.89 3.46
191 192 0.035458 AAGGTTCAGGACGGCTGAAG 59.965 55.000 0.00 0.00 40.89 3.02
192 193 0.250295 CAAGGTTCAGGACGGCTGAA 60.250 55.000 0.00 0.00 38.35 3.02
193 194 1.118965 TCAAGGTTCAGGACGGCTGA 61.119 55.000 0.00 0.00 0.00 4.26
194 195 0.951040 GTCAAGGTTCAGGACGGCTG 60.951 60.000 0.00 0.00 0.00 4.85
195 196 1.371558 GTCAAGGTTCAGGACGGCT 59.628 57.895 0.00 0.00 0.00 5.52
196 197 1.671379 GGTCAAGGTTCAGGACGGC 60.671 63.158 0.00 0.00 32.39 5.68
197 198 0.320771 CAGGTCAAGGTTCAGGACGG 60.321 60.000 0.00 0.00 32.39 4.79
198 199 0.393077 ACAGGTCAAGGTTCAGGACG 59.607 55.000 0.00 0.00 32.39 4.79
199 200 3.983044 ATACAGGTCAAGGTTCAGGAC 57.017 47.619 0.00 0.00 0.00 3.85
200 201 4.597507 AGAAATACAGGTCAAGGTTCAGGA 59.402 41.667 0.00 0.00 0.00 3.86
201 202 4.911390 AGAAATACAGGTCAAGGTTCAGG 58.089 43.478 0.00 0.00 0.00 3.86
202 203 5.182001 CCAAGAAATACAGGTCAAGGTTCAG 59.818 44.000 0.00 0.00 0.00 3.02
203 204 5.070001 CCAAGAAATACAGGTCAAGGTTCA 58.930 41.667 0.00 0.00 0.00 3.18
204 205 4.459337 CCCAAGAAATACAGGTCAAGGTTC 59.541 45.833 0.00 0.00 0.00 3.62
205 206 4.407365 CCCAAGAAATACAGGTCAAGGTT 58.593 43.478 0.00 0.00 0.00 3.50
206 207 3.245264 CCCCAAGAAATACAGGTCAAGGT 60.245 47.826 0.00 0.00 0.00 3.50
207 208 3.245264 ACCCCAAGAAATACAGGTCAAGG 60.245 47.826 0.00 0.00 0.00 3.61
208 209 3.758554 CACCCCAAGAAATACAGGTCAAG 59.241 47.826 0.00 0.00 0.00 3.02
209 210 3.139397 ACACCCCAAGAAATACAGGTCAA 59.861 43.478 0.00 0.00 0.00 3.18
210 211 2.714250 ACACCCCAAGAAATACAGGTCA 59.286 45.455 0.00 0.00 0.00 4.02
211 212 3.009143 AGACACCCCAAGAAATACAGGTC 59.991 47.826 0.00 0.00 0.00 3.85
212 213 2.986728 AGACACCCCAAGAAATACAGGT 59.013 45.455 0.00 0.00 0.00 4.00
213 214 3.009033 TGAGACACCCCAAGAAATACAGG 59.991 47.826 0.00 0.00 0.00 4.00
214 215 4.286297 TGAGACACCCCAAGAAATACAG 57.714 45.455 0.00 0.00 0.00 2.74
215 216 4.324254 GGATGAGACACCCCAAGAAATACA 60.324 45.833 0.00 0.00 0.00 2.29
216 217 4.080299 AGGATGAGACACCCCAAGAAATAC 60.080 45.833 0.00 0.00 0.00 1.89
217 218 4.111577 AGGATGAGACACCCCAAGAAATA 58.888 43.478 0.00 0.00 0.00 1.40
218 219 2.922283 AGGATGAGACACCCCAAGAAAT 59.078 45.455 0.00 0.00 0.00 2.17
219 220 2.348472 AGGATGAGACACCCCAAGAAA 58.652 47.619 0.00 0.00 0.00 2.52
220 221 2.044793 AGGATGAGACACCCCAAGAA 57.955 50.000 0.00 0.00 0.00 2.52
221 222 2.940514 TAGGATGAGACACCCCAAGA 57.059 50.000 0.00 0.00 0.00 3.02
222 223 3.312890 AGATAGGATGAGACACCCCAAG 58.687 50.000 0.00 0.00 0.00 3.61
223 224 3.421394 AGATAGGATGAGACACCCCAA 57.579 47.619 0.00 0.00 0.00 4.12
224 225 3.421394 AAGATAGGATGAGACACCCCA 57.579 47.619 0.00 0.00 0.00 4.96
225 226 5.544176 TCATTAAGATAGGATGAGACACCCC 59.456 44.000 0.00 0.00 0.00 4.95
226 227 6.672266 TCATTAAGATAGGATGAGACACCC 57.328 41.667 0.00 0.00 0.00 4.61
227 228 8.370940 TCATTCATTAAGATAGGATGAGACACC 58.629 37.037 0.00 0.00 32.00 4.16
228 229 9.770097 TTCATTCATTAAGATAGGATGAGACAC 57.230 33.333 0.00 0.00 32.00 3.67
235 236 9.803507 TGCTGATTTCATTCATTAAGATAGGAT 57.196 29.630 0.00 0.00 0.00 3.24
236 237 9.060347 GTGCTGATTTCATTCATTAAGATAGGA 57.940 33.333 0.00 0.00 0.00 2.94
237 238 8.843262 TGTGCTGATTTCATTCATTAAGATAGG 58.157 33.333 0.00 0.00 0.00 2.57
240 241 9.529325 CATTGTGCTGATTTCATTCATTAAGAT 57.471 29.630 0.00 0.00 0.00 2.40
241 242 7.490079 GCATTGTGCTGATTTCATTCATTAAGA 59.510 33.333 0.00 0.00 40.96 2.10
242 243 7.618442 GCATTGTGCTGATTTCATTCATTAAG 58.382 34.615 0.00 0.00 40.96 1.85
243 244 7.528481 GCATTGTGCTGATTTCATTCATTAA 57.472 32.000 0.00 0.00 40.96 1.40
259 260 2.458951 TGACGAAAAACAGCATTGTGC 58.541 42.857 0.00 0.00 45.46 4.57
260 261 5.640218 AAATGACGAAAAACAGCATTGTG 57.360 34.783 0.00 0.00 37.67 3.33
261 262 6.660887 AAAAATGACGAAAAACAGCATTGT 57.339 29.167 0.00 0.00 39.87 2.71
286 287 4.436852 GCGTCTCTGTCTGTGTTTCAAAAA 60.437 41.667 0.00 0.00 0.00 1.94
287 288 3.063452 GCGTCTCTGTCTGTGTTTCAAAA 59.937 43.478 0.00 0.00 0.00 2.44
288 289 2.607635 GCGTCTCTGTCTGTGTTTCAAA 59.392 45.455 0.00 0.00 0.00 2.69
289 290 2.201732 GCGTCTCTGTCTGTGTTTCAA 58.798 47.619 0.00 0.00 0.00 2.69
290 291 1.136110 TGCGTCTCTGTCTGTGTTTCA 59.864 47.619 0.00 0.00 0.00 2.69
375 385 0.251165 ATCCTCCAACAAACGGGGTG 60.251 55.000 0.00 0.00 0.00 4.61
376 386 1.364269 TATCCTCCAACAAACGGGGT 58.636 50.000 0.00 0.00 0.00 4.95
380 390 1.743394 GCCCTTATCCTCCAACAAACG 59.257 52.381 0.00 0.00 0.00 3.60
381 391 2.802719 TGCCCTTATCCTCCAACAAAC 58.197 47.619 0.00 0.00 0.00 2.93
386 396 0.258774 GGCTTGCCCTTATCCTCCAA 59.741 55.000 0.00 0.00 0.00 3.53
446 456 4.537433 GGGACGCTGGCTGGCTAG 62.537 72.222 2.00 1.54 0.00 3.42
463 473 3.257561 CTCGCGGCGAACATCCAG 61.258 66.667 26.28 8.83 34.74 3.86
534 544 2.435059 GCGGAGGAGCCAGTGAAC 60.435 66.667 0.00 0.00 35.94 3.18
567 577 1.375013 GCTTTGCCATTGCCTGTGG 60.375 57.895 0.00 0.00 39.80 4.17
585 595 1.376037 GGGTTCAGGGACGCTTCTG 60.376 63.158 0.00 0.00 0.00 3.02
594 604 2.046892 CTGCTCGTGGGTTCAGGG 60.047 66.667 0.00 0.00 0.00 4.45
600 618 0.832135 TTCTCTTCCTGCTCGTGGGT 60.832 55.000 0.00 0.00 0.00 4.51
608 626 0.176680 TGAGCGGATTCTCTTCCTGC 59.823 55.000 0.00 0.00 36.32 4.85
656 674 2.322081 CCACCTTTGCGTACACGGG 61.322 63.158 3.67 0.00 40.23 5.28
664 682 2.159338 CCAATCAATCTCCACCTTTGCG 60.159 50.000 0.00 0.00 0.00 4.85
700 719 4.301027 GGGCCGTGCGGATAGGAG 62.301 72.222 15.45 0.00 37.50 3.69
727 746 3.455619 AAATGATTGAGAACGACGTGC 57.544 42.857 0.00 0.00 0.00 5.34
747 766 9.574458 TTTAAAACTCGTGATGATTGACAAAAA 57.426 25.926 0.00 0.00 0.00 1.94
748 767 9.232082 CTTTAAAACTCGTGATGATTGACAAAA 57.768 29.630 0.00 0.00 0.00 2.44
749 768 8.616942 TCTTTAAAACTCGTGATGATTGACAAA 58.383 29.630 0.00 0.00 0.00 2.83
750 769 8.148807 TCTTTAAAACTCGTGATGATTGACAA 57.851 30.769 0.00 0.00 0.00 3.18
881 905 0.765903 ATGGATGGATGGGTCGAGCT 60.766 55.000 15.18 0.00 0.00 4.09
902 926 2.292569 CGGTACAGTACGTGCTATGGAT 59.707 50.000 5.64 0.00 0.00 3.41
903 927 1.672363 CGGTACAGTACGTGCTATGGA 59.328 52.381 5.64 0.00 0.00 3.41
904 928 1.862815 GCGGTACAGTACGTGCTATGG 60.863 57.143 5.64 0.00 0.00 2.74
905 929 1.202211 TGCGGTACAGTACGTGCTATG 60.202 52.381 20.89 0.00 33.55 2.23
906 930 1.097232 TGCGGTACAGTACGTGCTAT 58.903 50.000 20.89 0.00 33.55 2.97
952 976 0.815095 GCATGGGGGTAGAAAAACCG 59.185 55.000 0.00 0.00 40.73 4.44
981 1007 0.898326 TAGAACACGGCAGCTGGAGA 60.898 55.000 17.12 0.00 0.00 3.71
990 1016 1.883084 CGGGAGCATAGAACACGGC 60.883 63.158 0.00 0.00 0.00 5.68
991 1017 0.806102 CACGGGAGCATAGAACACGG 60.806 60.000 0.00 0.00 34.62 4.94
992 1018 0.806102 CCACGGGAGCATAGAACACG 60.806 60.000 0.00 0.00 36.48 4.49
994 1020 0.535335 GACCACGGGAGCATAGAACA 59.465 55.000 0.00 0.00 0.00 3.18
1146 1226 2.105128 CGAGGCCAGTGATCGTCC 59.895 66.667 5.01 0.00 0.00 4.79
1227 1308 4.282195 AGAGAAGTCTCCGAACTGAACAAT 59.718 41.667 4.67 0.00 43.88 2.71
1228 1309 3.637229 AGAGAAGTCTCCGAACTGAACAA 59.363 43.478 4.67 0.00 43.88 2.83
1229 1310 3.223435 AGAGAAGTCTCCGAACTGAACA 58.777 45.455 4.67 0.00 43.88 3.18
1275 1356 1.917273 CATTGGGTAGTCGGTACACG 58.083 55.000 0.00 0.00 37.96 4.49
1278 1359 0.179065 GGGCATTGGGTAGTCGGTAC 60.179 60.000 0.00 0.00 0.00 3.34
1287 1382 0.893727 GAACGAACTGGGCATTGGGT 60.894 55.000 0.00 0.00 0.00 4.51
1307 1402 0.179158 GAGAACGTCGAGAAGGGAGC 60.179 60.000 0.00 0.00 0.00 4.70
1335 1430 1.005275 ATGGATGCTGGCTCGATCG 60.005 57.895 9.36 9.36 0.00 3.69
1354 1449 3.679980 CGTGTATCTTCCACAGAAACAGG 59.320 47.826 0.00 0.00 34.16 4.00
1361 1456 3.659786 TGGTTTCGTGTATCTTCCACAG 58.340 45.455 0.00 0.00 33.00 3.66
1362 1457 3.755112 TGGTTTCGTGTATCTTCCACA 57.245 42.857 0.00 0.00 33.00 4.17
1363 1458 4.330074 CAGATGGTTTCGTGTATCTTCCAC 59.670 45.833 0.00 0.00 0.00 4.02
1379 1474 0.962356 CGGCAAAAGGAGCAGATGGT 60.962 55.000 0.00 0.00 0.00 3.55
1477 1579 5.605488 AGGAAGGGAGTACAAACTTACTGAA 59.395 40.000 7.22 0.00 35.56 3.02
1478 1580 5.152934 AGGAAGGGAGTACAAACTTACTGA 58.847 41.667 7.22 0.00 35.56 3.41
1491 1593 6.659668 GCAGAGTAAATAAAAAGGAAGGGAGT 59.340 38.462 0.00 0.00 0.00 3.85
1492 1594 6.659242 TGCAGAGTAAATAAAAAGGAAGGGAG 59.341 38.462 0.00 0.00 0.00 4.30
1493 1595 6.548321 TGCAGAGTAAATAAAAAGGAAGGGA 58.452 36.000 0.00 0.00 0.00 4.20
1494 1596 6.834168 TGCAGAGTAAATAAAAAGGAAGGG 57.166 37.500 0.00 0.00 0.00 3.95
1513 1615 8.186163 TTGATTTTAGTCAAAGCTGATATGCAG 58.814 33.333 0.00 0.00 40.03 4.41
1514 1616 7.628769 TGATTTTAGTCAAAGCTGATATGCA 57.371 32.000 0.00 0.00 33.05 3.96
1515 1617 8.801913 GTTTGATTTTAGTCAAAGCTGATATGC 58.198 33.333 2.59 0.00 45.71 3.14
1602 1704 8.785946 TCATCGTTGCATATATTTTCACATCAT 58.214 29.630 0.00 0.00 0.00 2.45
1603 1705 8.152309 TCATCGTTGCATATATTTTCACATCA 57.848 30.769 0.00 0.00 0.00 3.07
1604 1706 9.616634 ATTCATCGTTGCATATATTTTCACATC 57.383 29.630 0.00 0.00 0.00 3.06
1605 1707 9.970395 AATTCATCGTTGCATATATTTTCACAT 57.030 25.926 0.00 0.00 0.00 3.21
1606 1708 9.449550 GAATTCATCGTTGCATATATTTTCACA 57.550 29.630 0.00 0.00 0.00 3.58
1607 1709 9.449550 TGAATTCATCGTTGCATATATTTTCAC 57.550 29.630 3.38 0.00 0.00 3.18
1680 1782 9.005777 GGTTTGTGTAAAGTCCAACTTCATATA 57.994 33.333 0.00 0.00 37.47 0.86
1681 1783 7.039993 GGGTTTGTGTAAAGTCCAACTTCATAT 60.040 37.037 0.00 0.00 37.47 1.78
1682 1784 6.263617 GGGTTTGTGTAAAGTCCAACTTCATA 59.736 38.462 0.00 0.00 37.47 2.15
1683 1785 5.068591 GGGTTTGTGTAAAGTCCAACTTCAT 59.931 40.000 0.00 0.00 37.47 2.57
1684 1786 4.399934 GGGTTTGTGTAAAGTCCAACTTCA 59.600 41.667 0.00 0.00 37.47 3.02
1685 1787 4.202080 GGGGTTTGTGTAAAGTCCAACTTC 60.202 45.833 0.00 0.00 37.47 3.01
1686 1788 3.702548 GGGGTTTGTGTAAAGTCCAACTT 59.297 43.478 0.00 0.00 40.80 2.66
1687 1789 3.293337 GGGGTTTGTGTAAAGTCCAACT 58.707 45.455 0.00 0.00 0.00 3.16
1688 1790 2.363038 GGGGGTTTGTGTAAAGTCCAAC 59.637 50.000 0.00 0.00 0.00 3.77
1689 1791 2.668625 GGGGGTTTGTGTAAAGTCCAA 58.331 47.619 0.00 0.00 0.00 3.53
1690 1792 2.368311 GGGGGTTTGTGTAAAGTCCA 57.632 50.000 0.00 0.00 0.00 4.02
1706 1808 7.610580 TTTATTTCCTTTGCATATTAGGGGG 57.389 36.000 0.00 0.00 0.00 5.40
1707 1809 9.325198 GTTTTTATTTCCTTTGCATATTAGGGG 57.675 33.333 0.00 0.00 0.00 4.79
1708 1810 9.030301 CGTTTTTATTTCCTTTGCATATTAGGG 57.970 33.333 0.00 0.00 0.00 3.53
1709 1811 9.030301 CCGTTTTTATTTCCTTTGCATATTAGG 57.970 33.333 0.00 0.00 0.00 2.69
1710 1812 9.796120 TCCGTTTTTATTTCCTTTGCATATTAG 57.204 29.630 0.00 0.00 0.00 1.73
1711 1813 9.796120 CTCCGTTTTTATTTCCTTTGCATATTA 57.204 29.630 0.00 0.00 0.00 0.98
1712 1814 7.763985 CCTCCGTTTTTATTTCCTTTGCATATT 59.236 33.333 0.00 0.00 0.00 1.28
1713 1815 7.123547 TCCTCCGTTTTTATTTCCTTTGCATAT 59.876 33.333 0.00 0.00 0.00 1.78
1714 1816 6.434652 TCCTCCGTTTTTATTTCCTTTGCATA 59.565 34.615 0.00 0.00 0.00 3.14
1715 1817 5.245075 TCCTCCGTTTTTATTTCCTTTGCAT 59.755 36.000 0.00 0.00 0.00 3.96
1716 1818 4.585162 TCCTCCGTTTTTATTTCCTTTGCA 59.415 37.500 0.00 0.00 0.00 4.08
1717 1819 5.128992 TCCTCCGTTTTTATTTCCTTTGC 57.871 39.130 0.00 0.00 0.00 3.68
1718 1820 6.745116 ACTTCCTCCGTTTTTATTTCCTTTG 58.255 36.000 0.00 0.00 0.00 2.77
1719 1821 6.971726 ACTTCCTCCGTTTTTATTTCCTTT 57.028 33.333 0.00 0.00 0.00 3.11
1720 1822 6.999871 TGTACTTCCTCCGTTTTTATTTCCTT 59.000 34.615 0.00 0.00 0.00 3.36
1721 1823 6.536447 TGTACTTCCTCCGTTTTTATTTCCT 58.464 36.000 0.00 0.00 0.00 3.36
1722 1824 6.806388 TGTACTTCCTCCGTTTTTATTTCC 57.194 37.500 0.00 0.00 0.00 3.13
1723 1825 7.592533 GGTTTGTACTTCCTCCGTTTTTATTTC 59.407 37.037 0.00 0.00 0.00 2.17
1724 1826 7.068470 TGGTTTGTACTTCCTCCGTTTTTATTT 59.932 33.333 0.00 0.00 0.00 1.40
1725 1827 6.546772 TGGTTTGTACTTCCTCCGTTTTTATT 59.453 34.615 0.00 0.00 0.00 1.40
1726 1828 6.063404 TGGTTTGTACTTCCTCCGTTTTTAT 58.937 36.000 0.00 0.00 0.00 1.40
1727 1829 5.435291 TGGTTTGTACTTCCTCCGTTTTTA 58.565 37.500 0.00 0.00 0.00 1.52
1728 1830 4.271661 TGGTTTGTACTTCCTCCGTTTTT 58.728 39.130 0.00 0.00 0.00 1.94
1729 1831 3.888583 TGGTTTGTACTTCCTCCGTTTT 58.111 40.909 0.00 0.00 0.00 2.43
1730 1832 3.564053 TGGTTTGTACTTCCTCCGTTT 57.436 42.857 0.00 0.00 0.00 3.60
1731 1833 3.208594 GTTGGTTTGTACTTCCTCCGTT 58.791 45.455 0.00 0.00 0.00 4.44
1732 1834 2.171027 TGTTGGTTTGTACTTCCTCCGT 59.829 45.455 0.00 0.00 0.00 4.69
1733 1835 2.841215 TGTTGGTTTGTACTTCCTCCG 58.159 47.619 0.00 0.00 0.00 4.63
1734 1836 4.825085 TCAATGTTGGTTTGTACTTCCTCC 59.175 41.667 0.00 0.00 0.00 4.30
1735 1837 5.298276 TGTCAATGTTGGTTTGTACTTCCTC 59.702 40.000 0.00 0.00 0.00 3.71
1736 1838 5.067283 GTGTCAATGTTGGTTTGTACTTCCT 59.933 40.000 0.00 0.00 0.00 3.36
1737 1839 5.163602 TGTGTCAATGTTGGTTTGTACTTCC 60.164 40.000 0.00 0.00 0.00 3.46
1738 1840 5.741982 GTGTGTCAATGTTGGTTTGTACTTC 59.258 40.000 0.00 0.00 0.00 3.01
1739 1841 5.646606 GTGTGTCAATGTTGGTTTGTACTT 58.353 37.500 0.00 0.00 0.00 2.24
1740 1842 4.201871 CGTGTGTCAATGTTGGTTTGTACT 60.202 41.667 0.00 0.00 0.00 2.73
1741 1843 4.032355 CGTGTGTCAATGTTGGTTTGTAC 58.968 43.478 0.00 0.00 0.00 2.90
1742 1844 3.487711 GCGTGTGTCAATGTTGGTTTGTA 60.488 43.478 0.00 0.00 0.00 2.41
1771 1873 9.371136 TGTAATGTGTTGTTGCTCAAAAATAAA 57.629 25.926 0.00 0.00 37.81 1.40
1772 1874 8.812329 GTGTAATGTGTTGTTGCTCAAAAATAA 58.188 29.630 0.00 0.00 37.81 1.40
1773 1875 7.166638 CGTGTAATGTGTTGTTGCTCAAAAATA 59.833 33.333 0.00 0.00 37.81 1.40
1774 1876 6.019961 CGTGTAATGTGTTGTTGCTCAAAAAT 60.020 34.615 0.00 0.00 37.81 1.82
1775 1877 5.287274 CGTGTAATGTGTTGTTGCTCAAAAA 59.713 36.000 0.00 0.00 37.81 1.94
1776 1878 4.795795 CGTGTAATGTGTTGTTGCTCAAAA 59.204 37.500 0.00 0.00 37.81 2.44
1777 1879 4.142578 ACGTGTAATGTGTTGTTGCTCAAA 60.143 37.500 0.00 0.00 37.81 2.69
1778 1880 3.375610 ACGTGTAATGTGTTGTTGCTCAA 59.624 39.130 0.00 0.00 32.58 3.02
1779 1881 2.939756 ACGTGTAATGTGTTGTTGCTCA 59.060 40.909 0.00 0.00 32.58 4.26
1780 1882 3.602390 ACGTGTAATGTGTTGTTGCTC 57.398 42.857 0.00 0.00 32.58 4.26
1781 1883 3.496884 CCTACGTGTAATGTGTTGTTGCT 59.503 43.478 0.00 0.00 36.26 3.91
1782 1884 3.249080 ACCTACGTGTAATGTGTTGTTGC 59.751 43.478 0.00 0.00 36.26 4.17
1783 1885 5.006844 TCAACCTACGTGTAATGTGTTGTTG 59.993 40.000 0.00 0.00 39.43 3.33
1784 1886 5.006941 GTCAACCTACGTGTAATGTGTTGTT 59.993 40.000 0.00 0.00 39.43 2.83
1785 1887 4.508861 GTCAACCTACGTGTAATGTGTTGT 59.491 41.667 0.00 0.00 39.43 3.32
1786 1888 4.508492 TGTCAACCTACGTGTAATGTGTTG 59.492 41.667 0.00 1.65 39.64 3.33
1787 1889 4.695396 TGTCAACCTACGTGTAATGTGTT 58.305 39.130 0.00 0.00 36.26 3.32
1788 1890 4.325028 TGTCAACCTACGTGTAATGTGT 57.675 40.909 0.00 0.00 36.26 3.72
1789 1891 4.986034 TCTTGTCAACCTACGTGTAATGTG 59.014 41.667 0.00 0.00 36.26 3.21
1790 1892 4.986659 GTCTTGTCAACCTACGTGTAATGT 59.013 41.667 0.00 0.00 40.66 2.71
1791 1893 4.986034 TGTCTTGTCAACCTACGTGTAATG 59.014 41.667 0.00 0.00 0.00 1.90
1792 1894 5.204409 TGTCTTGTCAACCTACGTGTAAT 57.796 39.130 0.00 0.00 0.00 1.89
1793 1895 4.098349 ACTGTCTTGTCAACCTACGTGTAA 59.902 41.667 0.00 0.00 0.00 2.41
1794 1896 3.633525 ACTGTCTTGTCAACCTACGTGTA 59.366 43.478 0.00 0.00 0.00 2.90
1833 1935 1.742761 AGAATGATTGGGCTGTGTCG 58.257 50.000 0.00 0.00 0.00 4.35
1847 1949 5.178252 CCATGGCTTATCGAGTTGTAGAATG 59.822 44.000 0.00 0.00 0.00 2.67
1852 1954 2.484770 GGCCATGGCTTATCGAGTTGTA 60.485 50.000 34.70 0.00 41.60 2.41
1853 1955 1.668419 GCCATGGCTTATCGAGTTGT 58.332 50.000 29.98 0.00 38.26 3.32
1879 2091 3.936772 TTGATTCCTGGGCCCACGC 62.937 63.158 24.45 9.04 0.00 5.34
1880 2092 0.897863 TTTTGATTCCTGGGCCCACG 60.898 55.000 24.45 18.62 0.00 4.94
1930 2142 1.533625 TTCCGCAGAAGTTGGAATGG 58.466 50.000 0.00 0.00 36.92 3.16
1931 2143 2.098117 GGATTCCGCAGAAGTTGGAATG 59.902 50.000 10.22 0.00 36.92 2.67
1932 2144 2.290896 TGGATTCCGCAGAAGTTGGAAT 60.291 45.455 5.46 5.46 36.92 3.01
1933 2145 1.073125 TGGATTCCGCAGAAGTTGGAA 59.927 47.619 0.00 0.00 36.92 3.53
1979 2191 2.265904 GGCGGTTGTCCCTTGGTTC 61.266 63.158 0.00 0.00 0.00 3.62
2002 2214 1.745489 GTGTGAAGGGGGATGACGC 60.745 63.158 0.00 0.00 0.00 5.19
2008 2220 0.178955 TGTACGAGTGTGAAGGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
2011 2223 0.603569 AGCTGTACGAGTGTGAAGGG 59.396 55.000 0.00 0.00 0.00 3.95
2014 2226 3.278367 GTACAGCTGTACGAGTGTGAA 57.722 47.619 34.51 7.87 41.06 3.18
2015 2227 2.983402 GTACAGCTGTACGAGTGTGA 57.017 50.000 34.51 8.62 41.06 3.58
2038 2250 1.759236 GGTTGGAAGGGGACTCGTT 59.241 57.895 0.00 0.00 42.68 3.85
2366 2592 0.491371 AAATGGGCAAGAGGGGGAAA 59.509 50.000 0.00 0.00 0.00 3.13
2367 2593 0.041090 GAAATGGGCAAGAGGGGGAA 59.959 55.000 0.00 0.00 0.00 3.97
2401 2627 0.447801 CAAAACGGGATCGCAAGGAG 59.552 55.000 10.70 0.00 40.63 3.69
2402 2628 1.582610 GCAAAACGGGATCGCAAGGA 61.583 55.000 10.70 0.00 40.63 3.36
2403 2629 1.154035 GCAAAACGGGATCGCAAGG 60.154 57.895 10.70 0.00 40.63 3.61
2404 2630 0.454957 CAGCAAAACGGGATCGCAAG 60.455 55.000 10.70 0.00 40.63 4.01
2405 2631 0.886938 TCAGCAAAACGGGATCGCAA 60.887 50.000 10.70 0.00 40.63 4.85
2406 2632 0.676466 ATCAGCAAAACGGGATCGCA 60.676 50.000 10.70 0.00 40.63 5.10
2407 2633 0.451783 AATCAGCAAAACGGGATCGC 59.548 50.000 0.00 0.00 40.63 4.58
2408 2634 1.737236 TGAATCAGCAAAACGGGATCG 59.263 47.619 0.00 0.00 43.02 3.69
2409 2635 3.428045 CCTTGAATCAGCAAAACGGGATC 60.428 47.826 0.00 0.00 0.00 3.36
2410 2636 2.493278 CCTTGAATCAGCAAAACGGGAT 59.507 45.455 0.00 0.00 0.00 3.85
2412 2638 1.669795 GCCTTGAATCAGCAAAACGGG 60.670 52.381 0.00 0.00 0.00 5.28
2443 2671 2.586079 AATCACCGATCTGCCGCG 60.586 61.111 0.00 0.00 0.00 6.46
2547 2939 2.027192 TCTGGCCACTCATCCAAAGTAC 60.027 50.000 0.00 0.00 30.98 2.73
2549 2941 1.067295 TCTGGCCACTCATCCAAAGT 58.933 50.000 0.00 0.00 30.98 2.66
2581 2973 2.401583 ATTCAGCACGCCACAGATAA 57.598 45.000 0.00 0.00 0.00 1.75
2583 2975 1.470098 GAAATTCAGCACGCCACAGAT 59.530 47.619 0.00 0.00 0.00 2.90
2584 2976 0.874390 GAAATTCAGCACGCCACAGA 59.126 50.000 0.00 0.00 0.00 3.41
2585 2977 0.877071 AGAAATTCAGCACGCCACAG 59.123 50.000 0.00 0.00 0.00 3.66
2586 2978 0.592637 CAGAAATTCAGCACGCCACA 59.407 50.000 0.00 0.00 0.00 4.17
2587 2979 0.730494 GCAGAAATTCAGCACGCCAC 60.730 55.000 5.47 0.00 0.00 5.01
2588 2980 0.890542 AGCAGAAATTCAGCACGCCA 60.891 50.000 12.73 0.00 30.69 5.69
2589 2981 0.242017 AAGCAGAAATTCAGCACGCC 59.758 50.000 12.73 0.00 30.69 5.68
2590 2982 1.717645 CAAAGCAGAAATTCAGCACGC 59.282 47.619 12.73 0.00 30.69 5.34
2594 2986 7.823149 AAACATATCAAAGCAGAAATTCAGC 57.177 32.000 1.92 1.92 0.00 4.26
2608 3000 5.874810 AGCGAGAGTAGCAAAAACATATCAA 59.125 36.000 0.00 0.00 37.01 2.57
2664 3057 5.525378 ACAGACACTGCTCTAAAAACTTCTG 59.475 40.000 0.00 0.00 34.37 3.02
2679 3072 5.063944 GCTCCACATAAACATACAGACACTG 59.936 44.000 0.00 0.00 37.52 3.66
2820 3217 7.306051 CGATCTTCCATAACACTGACGAAATAC 60.306 40.741 0.00 0.00 0.00 1.89
2906 3305 7.136289 TCAAAGTTCCATAATTACACCGTTC 57.864 36.000 0.00 0.00 0.00 3.95
2908 3307 7.696992 AATCAAAGTTCCATAATTACACCGT 57.303 32.000 0.00 0.00 0.00 4.83
2922 3321 7.378461 TGCGACAGAAAACATTAATCAAAGTTC 59.622 33.333 0.00 0.00 0.00 3.01
2964 3364 6.642131 ACAGTGCATCACAACAAATTACAATC 59.358 34.615 0.00 0.00 36.74 2.67
2977 3377 3.814842 CCAGTAGAAAACAGTGCATCACA 59.185 43.478 0.00 0.00 36.74 3.58
2994 3394 8.523915 TCTAATTATCGTAGTGTTTCCCAGTA 57.476 34.615 0.00 0.00 0.00 2.74
2995 3395 7.414222 TCTAATTATCGTAGTGTTTCCCAGT 57.586 36.000 0.00 0.00 0.00 4.00
3015 3415 7.378966 GGCAGTAGTGAACTATGCATATCTAA 58.621 38.462 6.92 0.00 35.76 2.10
3017 3417 5.279708 GGGCAGTAGTGAACTATGCATATCT 60.280 44.000 6.92 0.00 35.76 1.98
3021 3422 2.774234 AGGGCAGTAGTGAACTATGCAT 59.226 45.455 3.79 3.79 35.76 3.96
3022 3423 2.093500 CAGGGCAGTAGTGAACTATGCA 60.093 50.000 18.23 0.00 35.76 3.96
3074 3475 5.277250 TCCATGAGTAACTGTCCCAAGATA 58.723 41.667 0.00 0.00 0.00 1.98
3085 3486 6.377429 TCGACAGTAGAAATCCATGAGTAACT 59.623 38.462 0.00 0.00 0.00 2.24
3090 3491 7.374272 ACATATCGACAGTAGAAATCCATGAG 58.626 38.462 0.00 0.00 0.00 2.90
3104 3512 9.476202 TGGAACTAATCATTAACATATCGACAG 57.524 33.333 0.00 0.00 0.00 3.51
3115 3523 7.639378 AGGGCTAAACTGGAACTAATCATTAA 58.361 34.615 0.00 0.00 0.00 1.40
3144 3552 1.009829 CATTTCTACAGCCGACAGCC 58.990 55.000 0.00 0.00 45.47 4.85
3153 3561 9.868277 AGTGAAAGAGAGATAACATTTCTACAG 57.132 33.333 0.00 0.00 32.42 2.74
3221 3629 3.797039 TCGATCAACCAGCCAAGAATAG 58.203 45.455 0.00 0.00 0.00 1.73
3228 3636 2.158769 AGCATAATCGATCAACCAGCCA 60.159 45.455 0.00 0.00 0.00 4.75
3277 3685 5.334802 CCTGTGTGTTAGCATTTCATTTCGA 60.335 40.000 0.00 0.00 0.00 3.71
3296 3704 2.680913 GCCTACTGCGTTGCCTGTG 61.681 63.158 0.00 0.00 0.00 3.66
3298 3706 3.127533 GGCCTACTGCGTTGCCTG 61.128 66.667 0.00 0.00 42.61 4.85
3300 3708 3.127533 CAGGCCTACTGCGTTGCC 61.128 66.667 3.98 11.29 40.97 4.52
3325 3733 5.352016 AGCACTACGTTAACTTCACAAAACA 59.648 36.000 3.71 0.00 0.00 2.83
3326 3734 5.675444 CAGCACTACGTTAACTTCACAAAAC 59.325 40.000 3.71 0.00 0.00 2.43
3333 3741 5.006941 TGTTTTCCAGCACTACGTTAACTTC 59.993 40.000 3.71 0.00 0.00 3.01
3336 3744 4.271776 AGTGTTTTCCAGCACTACGTTAAC 59.728 41.667 0.00 0.00 43.30 2.01
3369 3777 6.380846 TGCTCTTAATATCAAGTGGGCAAATT 59.619 34.615 0.00 0.00 0.00 1.82
3412 3820 4.084380 GCAACTTTTGATTTTGCCTACTGC 60.084 41.667 0.00 0.00 39.82 4.40
3451 3859 5.389307 CGACTTTTCTTGCTGATCTCAGAAC 60.389 44.000 11.34 0.00 46.59 3.01
3452 3860 4.687948 CGACTTTTCTTGCTGATCTCAGAA 59.312 41.667 11.34 0.00 46.59 3.02
3453 3861 4.240888 CGACTTTTCTTGCTGATCTCAGA 58.759 43.478 11.34 0.00 46.59 3.27
3454 3862 3.370366 CCGACTTTTCTTGCTGATCTCAG 59.630 47.826 2.75 2.75 46.40 3.35
3476 3884 3.492137 CCGGCTAGTGATAGGTTGGTTAC 60.492 52.174 0.00 0.00 0.00 2.50
3486 3894 1.371183 GGCATGCCGGCTAGTGATA 59.629 57.895 29.70 5.17 37.17 2.15
3507 3915 6.686630 AGCACGATTCATTTGATACCAAAAA 58.313 32.000 0.00 0.00 44.49 1.94
3521 3929 7.615582 AATCAAAGATTTAGAGCACGATTCA 57.384 32.000 0.00 0.00 0.00 2.57
3968 4381 6.048732 ACCAAAAGCAATACAAATAAGGGG 57.951 37.500 0.00 0.00 0.00 4.79
3983 4396 3.803778 CACAGGAACATGAAACCAAAAGC 59.196 43.478 0.00 0.00 0.00 3.51
4311 4724 3.956199 CTGTTACATGCATGGGAGGAAAT 59.044 43.478 29.41 9.36 0.00 2.17
4329 4742 6.480320 GGATACTTCGCTACAAATGATCTGTT 59.520 38.462 0.00 0.00 0.00 3.16
4451 4864 5.006941 AGAGCTACGATCGTCTTTCTTACTC 59.993 44.000 26.48 18.24 0.00 2.59
4469 4882 5.834204 GGGAAGAGAATTGTACCTAGAGCTA 59.166 44.000 0.00 0.00 0.00 3.32
4662 5076 8.023128 ACTGATATGAACAAAATCACCTTTTCG 58.977 33.333 0.00 0.00 34.80 3.46
4689 5103 2.751259 ACTTCTTGCAATCACGCATCAT 59.249 40.909 0.00 0.00 42.62 2.45
4755 5169 0.107654 ATAAGGCCGTGCAAGAGACC 60.108 55.000 0.00 0.00 0.00 3.85
4766 5180 5.707298 AGATGACATGGAATAAATAAGGCCG 59.293 40.000 0.00 0.00 0.00 6.13
4802 5216 2.154462 GTAACCTTGAGTGCATGCTGT 58.846 47.619 20.33 5.56 0.00 4.40
4806 5220 4.836125 ACAAAGTAACCTTGAGTGCATG 57.164 40.909 0.00 0.00 0.00 4.06
4826 5243 5.953183 TGAATGCATATGAACTCAACCAAC 58.047 37.500 6.97 0.00 0.00 3.77
4932 5349 5.475220 TGGAACCGTACATTGATCAAACATT 59.525 36.000 13.09 3.89 0.00 2.71
4964 5381 4.223700 AGGTTCAACTATCTCACATGCTCA 59.776 41.667 0.00 0.00 0.00 4.26
5150 5573 8.523523 TCTCAAATGTGCAATCAATAAAGTTG 57.476 30.769 0.00 0.00 0.00 3.16
5298 5721 1.923356 AACCATGCTTAACCACAGGG 58.077 50.000 0.00 0.00 43.28 4.45
5374 5797 4.578105 CCTCTGCAGTGAAAAGAGTTTCTT 59.422 41.667 17.19 0.00 43.13 2.52
5408 5831 4.083271 GCTGTGTCCAACTTTACTCCATTC 60.083 45.833 0.00 0.00 0.00 2.67
5423 5846 4.630069 AGTAATGTATTGTTCGCTGTGTCC 59.370 41.667 0.00 0.00 0.00 4.02
5445 5868 6.567891 GCAGTTTACAGGCTTTACTTTGGTAG 60.568 42.308 0.00 0.00 0.00 3.18
5495 5918 2.001812 AGACAGATAACGCACAGCAG 57.998 50.000 0.00 0.00 0.00 4.24
5500 5923 4.438145 CACGATTCTAGACAGATAACGCAC 59.562 45.833 0.00 0.00 0.00 5.34
5507 5930 5.053145 GCCATTTCACGATTCTAGACAGAT 58.947 41.667 0.00 0.00 0.00 2.90
5527 5950 2.265182 GCAGTTTTACTGGCCGCCA 61.265 57.895 12.67 12.67 46.01 5.69
5569 5992 5.717078 CCAAATGAGGCAGCATTATACAT 57.283 39.130 6.11 0.00 37.50 2.29
5584 6007 2.361757 CAACACAAGGTCTGCCAAATGA 59.638 45.455 0.00 0.00 37.19 2.57
5699 6122 5.916883 CACAGTTTTGCTTATTTGAGTCAGG 59.083 40.000 0.00 0.00 0.00 3.86
5700 6123 6.728200 TCACAGTTTTGCTTATTTGAGTCAG 58.272 36.000 0.00 0.00 0.00 3.51
5749 6172 2.338500 GGACAGAGTACAAAGGAAGCG 58.662 52.381 0.00 0.00 0.00 4.68
5767 6190 9.967451 TGTCAAAAACACTCTTATATTATGGGA 57.033 29.630 0.00 0.00 31.20 4.37
5790 6213 2.030805 AGGAGCGCTTTTGACAAATGTC 60.031 45.455 13.26 6.60 44.97 3.06
5791 6214 1.956477 AGGAGCGCTTTTGACAAATGT 59.044 42.857 13.26 0.00 0.00 2.71
5792 6215 2.712057 AGGAGCGCTTTTGACAAATG 57.288 45.000 13.26 5.47 0.00 2.32
5793 6216 6.699575 AATATAGGAGCGCTTTTGACAAAT 57.300 33.333 13.26 0.00 0.00 2.32
5794 6217 6.237996 CGTAATATAGGAGCGCTTTTGACAAA 60.238 38.462 13.26 0.00 0.00 2.83
5795 6218 5.233476 CGTAATATAGGAGCGCTTTTGACAA 59.767 40.000 13.26 0.00 0.00 3.18
5796 6219 4.743151 CGTAATATAGGAGCGCTTTTGACA 59.257 41.667 13.26 0.00 0.00 3.58
5797 6220 4.150098 CCGTAATATAGGAGCGCTTTTGAC 59.850 45.833 13.26 0.00 0.00 3.18
5798 6221 4.304110 CCGTAATATAGGAGCGCTTTTGA 58.696 43.478 13.26 0.00 0.00 2.69
5799 6222 3.432252 CCCGTAATATAGGAGCGCTTTTG 59.568 47.826 13.26 0.00 0.00 2.44
5800 6223 3.322828 TCCCGTAATATAGGAGCGCTTTT 59.677 43.478 13.26 5.48 0.00 2.27
5801 6224 2.895404 TCCCGTAATATAGGAGCGCTTT 59.105 45.455 13.26 5.91 0.00 3.51
5802 6225 2.522185 TCCCGTAATATAGGAGCGCTT 58.478 47.619 13.26 0.00 0.00 4.68
5803 6226 2.211250 TCCCGTAATATAGGAGCGCT 57.789 50.000 11.27 11.27 0.00 5.92
5804 6227 2.416972 CCTTCCCGTAATATAGGAGCGC 60.417 54.545 0.00 0.00 0.00 5.92
5805 6228 3.087031 TCCTTCCCGTAATATAGGAGCG 58.913 50.000 0.00 0.00 31.60 5.03
5806 6229 3.447944 CCTCCTTCCCGTAATATAGGAGC 59.552 52.174 10.28 0.00 46.88 4.70
5808 6231 3.664127 TCCCTCCTTCCCGTAATATAGGA 59.336 47.826 0.00 0.00 34.07 2.94
5809 6232 4.024670 CTCCCTCCTTCCCGTAATATAGG 58.975 52.174 0.00 0.00 0.00 2.57
5810 6233 4.675038 ACTCCCTCCTTCCCGTAATATAG 58.325 47.826 0.00 0.00 0.00 1.31
5811 6234 4.754411 ACTCCCTCCTTCCCGTAATATA 57.246 45.455 0.00 0.00 0.00 0.86
5812 6235 3.632420 ACTCCCTCCTTCCCGTAATAT 57.368 47.619 0.00 0.00 0.00 1.28
5813 6236 3.464833 ACTACTCCCTCCTTCCCGTAATA 59.535 47.826 0.00 0.00 0.00 0.98
5814 6237 2.246849 ACTACTCCCTCCTTCCCGTAAT 59.753 50.000 0.00 0.00 0.00 1.89
5815 6238 1.642762 ACTACTCCCTCCTTCCCGTAA 59.357 52.381 0.00 0.00 0.00 3.18
5816 6239 1.302907 ACTACTCCCTCCTTCCCGTA 58.697 55.000 0.00 0.00 0.00 4.02
5817 6240 0.412640 AACTACTCCCTCCTTCCCGT 59.587 55.000 0.00 0.00 0.00 5.28
5818 6241 1.112950 GAACTACTCCCTCCTTCCCG 58.887 60.000 0.00 0.00 0.00 5.14
5819 6242 2.249309 TGAACTACTCCCTCCTTCCC 57.751 55.000 0.00 0.00 0.00 3.97
5820 6243 3.682999 GCAATGAACTACTCCCTCCTTCC 60.683 52.174 0.00 0.00 0.00 3.46
5821 6244 3.536570 GCAATGAACTACTCCCTCCTTC 58.463 50.000 0.00 0.00 0.00 3.46
5822 6245 2.239907 GGCAATGAACTACTCCCTCCTT 59.760 50.000 0.00 0.00 0.00 3.36
5823 6246 1.840635 GGCAATGAACTACTCCCTCCT 59.159 52.381 0.00 0.00 0.00 3.69
5824 6247 1.559682 TGGCAATGAACTACTCCCTCC 59.440 52.381 0.00 0.00 0.00 4.30
5825 6248 3.567478 ATGGCAATGAACTACTCCCTC 57.433 47.619 0.00 0.00 0.00 4.30
5826 6249 3.372025 GGAATGGCAATGAACTACTCCCT 60.372 47.826 0.00 0.00 0.00 4.20
5827 6250 2.952310 GGAATGGCAATGAACTACTCCC 59.048 50.000 0.00 0.00 0.00 4.30
5828 6251 3.891049 AGGAATGGCAATGAACTACTCC 58.109 45.455 0.00 0.00 0.00 3.85
5829 6252 7.573968 AAATAGGAATGGCAATGAACTACTC 57.426 36.000 0.00 0.00 0.00 2.59
5835 6258 8.980596 ACAGAAATAAATAGGAATGGCAATGAA 58.019 29.630 0.00 0.00 0.00 2.57
5873 6312 7.398332 AGTCATGAAAAGGAGGCAAGAAATATT 59.602 33.333 0.00 0.00 0.00 1.28
5908 6349 4.777463 CCCAGTACCGTTTGGAATCTTAT 58.223 43.478 0.52 0.00 39.21 1.73
5928 6369 0.175760 TGATAGCAGAACAGTCGCCC 59.824 55.000 0.00 0.00 0.00 6.13
5985 6426 0.310543 TGTTTGTTCGCCAGTGATGC 59.689 50.000 0.00 0.00 0.00 3.91
5986 6427 1.664016 GCTGTTTGTTCGCCAGTGATG 60.664 52.381 0.00 0.00 0.00 3.07
5996 6437 1.133407 TCAACCGGTTGCTGTTTGTTC 59.867 47.619 37.21 0.00 40.24 3.18
6034 6476 3.988976 AGACCAATGTCAGCACAGTAT 57.011 42.857 0.00 0.00 44.33 2.12
6050 6492 4.837972 AGGCACTGAGAGAAATTTAGACC 58.162 43.478 0.00 0.00 37.18 3.85
6131 6576 3.126001 TCTGTGTTTTCCGATTCAGCT 57.874 42.857 0.00 0.00 0.00 4.24
6138 6583 6.928979 TTTAGTTTGATCTGTGTTTTCCGA 57.071 33.333 0.00 0.00 0.00 4.55
6139 6584 9.840427 AATATTTAGTTTGATCTGTGTTTTCCG 57.160 29.630 0.00 0.00 0.00 4.30
6189 6635 3.068307 AGCGTGTATCAACCTGTAGGATC 59.932 47.826 4.64 0.00 38.94 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.