Multiple sequence alignment - TraesCS5A01G243700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G243700 chr5A 100.000 3862 0 0 347 4208 458193855 458189994 0.000000e+00 7132.0
1 TraesCS5A01G243700 chr5A 92.337 1318 56 22 705 2009 456068249 456069534 0.000000e+00 1832.0
2 TraesCS5A01G243700 chr5A 89.635 1341 84 19 2086 3408 456069571 456070874 0.000000e+00 1655.0
3 TraesCS5A01G243700 chr5A 85.433 508 65 6 1499 1998 458177977 458177471 1.730000e-143 520.0
4 TraesCS5A01G243700 chr5A 84.810 474 58 12 929 1398 458279370 458278907 8.240000e-127 464.0
5 TraesCS5A01G243700 chr5A 83.333 504 75 6 1499 1998 456088222 456088720 1.380000e-124 457.0
6 TraesCS5A01G243700 chr5A 85.678 398 50 6 999 1391 458179303 458178908 3.030000e-111 412.0
7 TraesCS5A01G243700 chr5A 84.826 402 58 3 990 1391 456087750 456088148 6.550000e-108 401.0
8 TraesCS5A01G243700 chr5A 89.968 309 31 0 1684 1992 458273314 458273006 2.360000e-107 399.0
9 TraesCS5A01G243700 chr5A 92.105 266 16 2 444 709 456066262 456066522 1.850000e-98 370.0
10 TraesCS5A01G243700 chr5A 83.200 375 44 15 2855 3219 458277311 458276946 4.060000e-85 326.0
11 TraesCS5A01G243700 chr5A 82.493 377 45 12 2844 3213 458225820 458225458 1.140000e-80 311.0
12 TraesCS5A01G243700 chr5A 78.763 485 59 22 2090 2565 458177403 458176954 6.890000e-73 285.0
13 TraesCS5A01G243700 chr5A 80.759 369 53 8 2834 3193 458176182 458175823 5.360000e-69 272.0
14 TraesCS5A01G243700 chr5A 81.341 343 44 11 2874 3201 458232980 458232643 1.160000e-65 261.0
15 TraesCS5A01G243700 chr5A 75.253 691 89 56 2090 2742 456088793 456089439 1.940000e-63 254.0
16 TraesCS5A01G243700 chr5A 100.000 121 0 0 1 121 458194201 458194081 1.520000e-54 224.0
17 TraesCS5A01G243700 chr5A 94.444 126 7 0 3443 3568 456072037 456072162 1.190000e-45 195.0
18 TraesCS5A01G243700 chr5A 89.412 85 7 2 4054 4137 645673043 645672960 5.750000e-19 106.0
19 TraesCS5A01G243700 chr5A 95.556 45 2 0 3727 3771 456072160 456072204 5.840000e-09 73.1
20 TraesCS5A01G243700 chr5A 97.368 38 1 0 62 99 322892094 322892057 9.770000e-07 65.8
21 TraesCS5A01G243700 chr5D 90.446 3161 177 53 446 3568 356839451 356836378 0.000000e+00 4048.0
22 TraesCS5A01G243700 chr5D 79.747 711 116 25 1684 2379 357016410 357015713 1.360000e-134 490.0
23 TraesCS5A01G243700 chr5D 84.252 508 69 7 1499 1996 356800619 356800113 6.330000e-133 484.0
24 TraesCS5A01G243700 chr5D 84.244 476 64 9 926 1398 357017167 357016700 1.780000e-123 453.0
25 TraesCS5A01G243700 chr5D 83.073 384 44 13 2837 3213 356909681 356909312 3.140000e-86 329.0
26 TraesCS5A01G243700 chr5D 83.562 365 43 11 2855 3211 357015087 357014732 4.060000e-85 326.0
27 TraesCS5A01G243700 chr5D 77.963 481 68 17 2098 2565 356800031 356799576 2.490000e-67 267.0
28 TraesCS5A01G243700 chr5D 88.623 167 13 4 3566 3729 127451980 127452143 9.230000e-47 198.0
29 TraesCS5A01G243700 chr5D 89.394 132 14 0 1498 1629 357016631 357016500 2.600000e-37 167.0
30 TraesCS5A01G243700 chr5D 77.597 308 36 19 2105 2408 356688423 356688145 5.630000e-34 156.0
31 TraesCS5A01G243700 chr5D 84.466 103 16 0 19 121 356839749 356839647 7.440000e-18 102.0
32 TraesCS5A01G243700 chr5B 88.542 1571 106 39 2026 3567 421621015 421619490 0.000000e+00 1836.0
33 TraesCS5A01G243700 chr5B 92.284 972 52 11 444 1406 421622734 421621777 0.000000e+00 1358.0
34 TraesCS5A01G243700 chr5B 94.516 310 16 1 1667 1975 421621330 421621021 1.060000e-130 477.0
35 TraesCS5A01G243700 chr5B 83.054 478 66 11 926 1398 421718147 421717680 1.810000e-113 420.0
36 TraesCS5A01G243700 chr5B 90.062 322 31 1 1678 1998 421612441 421612120 2.340000e-112 416.0
37 TraesCS5A01G243700 chr5B 84.382 429 58 7 966 1391 421613183 421612761 3.030000e-111 412.0
38 TraesCS5A01G243700 chr5B 84.932 365 42 9 2855 3211 421716208 421715849 1.440000e-94 357.0
39 TraesCS5A01G243700 chr5B 83.073 384 44 10 2837 3213 421696044 421695675 3.140000e-86 329.0
40 TraesCS5A01G243700 chr5B 78.794 481 61 22 2090 2565 421612023 421611579 6.890000e-73 285.0
41 TraesCS5A01G243700 chr5B 91.566 166 10 2 1466 1631 421621759 421621598 4.230000e-55 226.0
42 TraesCS5A01G243700 chr5B 87.879 132 15 1 1499 1630 421612651 421612521 2.030000e-33 154.0
43 TraesCS5A01G243700 chr1A 94.839 155 8 0 4054 4208 526579617 526579771 4.200000e-60 243.0
44 TraesCS5A01G243700 chr7A 94.231 156 8 1 4054 4208 558154852 558155007 1.960000e-58 237.0
45 TraesCS5A01G243700 chr3A 94.194 155 8 1 4054 4207 227926152 227925998 7.030000e-58 235.0
46 TraesCS5A01G243700 chr3B 91.463 164 11 2 3566 3728 169691794 169691955 5.480000e-54 222.0
47 TraesCS5A01G243700 chr3B 89.634 164 13 3 3566 3728 719421079 719421239 5.510000e-49 206.0
48 TraesCS5A01G243700 chr3B 82.828 99 17 0 23 121 215022547 215022645 5.790000e-14 89.8
49 TraesCS5A01G243700 chrUn 90.798 163 13 2 3566 3728 175474413 175474573 2.550000e-52 217.0
50 TraesCS5A01G243700 chr2A 97.600 125 3 0 4054 4178 539392654 539392530 9.160000e-52 215.0
51 TraesCS5A01G243700 chr3D 89.820 167 14 2 3565 3730 19328930 19328766 1.190000e-50 211.0
52 TraesCS5A01G243700 chr3D 87.209 172 18 3 3558 3728 536788329 536788497 4.290000e-45 193.0
53 TraesCS5A01G243700 chr6D 89.222 167 15 2 3563 3728 311580531 311580695 5.510000e-49 206.0
54 TraesCS5A01G243700 chr6D 87.719 171 15 4 3565 3732 55895890 55895723 1.190000e-45 195.0
55 TraesCS5A01G243700 chr6D 87.324 71 8 1 37 106 471613930 471614000 3.490000e-11 80.5
56 TraesCS5A01G243700 chr4A 89.024 164 15 2 3566 3728 660522538 660522377 2.570000e-47 200.0
57 TraesCS5A01G243700 chr1D 89.286 84 7 2 4055 4137 62871132 62871050 2.070000e-18 104.0
58 TraesCS5A01G243700 chr1D 86.747 83 11 0 4055 4137 155928659 155928741 4.480000e-15 93.5
59 TraesCS5A01G243700 chr7B 89.062 64 6 1 55 117 647006545 647006608 1.250000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G243700 chr5A 458189994 458194201 4207 True 3678.000000 7132 100.000000 1 4208 2 chr5A.!!$R6 4207
1 TraesCS5A01G243700 chr5A 456066262 456072204 5942 False 825.020000 1832 92.815400 444 3771 5 chr5A.!!$F1 3327
2 TraesCS5A01G243700 chr5A 458273006 458279370 6364 True 396.333333 464 85.992667 929 3219 3 chr5A.!!$R7 2290
3 TraesCS5A01G243700 chr5A 458175823 458179303 3480 True 372.250000 520 82.658250 999 3193 4 chr5A.!!$R5 2194
4 TraesCS5A01G243700 chr5A 456087750 456089439 1689 False 370.666667 457 81.137333 990 2742 3 chr5A.!!$F2 1752
5 TraesCS5A01G243700 chr5D 356836378 356839749 3371 True 2075.000000 4048 87.456000 19 3568 2 chr5D.!!$R4 3549
6 TraesCS5A01G243700 chr5D 356799576 356800619 1043 True 375.500000 484 81.107500 1499 2565 2 chr5D.!!$R3 1066
7 TraesCS5A01G243700 chr5D 357014732 357017167 2435 True 359.000000 490 84.236750 926 3211 4 chr5D.!!$R5 2285
8 TraesCS5A01G243700 chr5B 421619490 421622734 3244 True 974.250000 1836 91.727000 444 3567 4 chr5B.!!$R3 3123
9 TraesCS5A01G243700 chr5B 421715849 421718147 2298 True 388.500000 420 83.993000 926 3211 2 chr5B.!!$R4 2285
10 TraesCS5A01G243700 chr5B 421611579 421613183 1604 True 316.750000 416 85.279250 966 2565 4 chr5B.!!$R2 1599

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
831 2619 0.183492 AGTCCTGCAAGCCTTGTTGA 59.817 50.0 6.28 0.0 0.00 3.18 F
832 2620 1.032014 GTCCTGCAAGCCTTGTTGAA 58.968 50.0 6.28 0.0 0.00 2.69 F
919 2707 1.265454 ACTGCCCTCTTTCCCCTACG 61.265 60.0 0.00 0.0 0.00 3.51 F
923 2711 1.550130 CCCTCTTTCCCCTACGTGCA 61.550 60.0 0.00 0.0 0.00 4.57 F
1490 4161 1.780806 CTGGCTGATCACGCTAGATG 58.219 55.0 18.92 0.0 38.11 2.90 F
2757 6367 0.179108 GTAGCAGATCACGACCACCC 60.179 60.0 0.00 0.0 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1810 4736 1.174078 TCACCAGGAAGACGTACGCA 61.174 55.000 16.72 0.0 0.00 5.24 R
2150 5113 1.646189 GGTCCAGAAGAAGTCGATGC 58.354 55.000 0.00 0.0 0.00 3.91 R
2579 6087 1.656429 GCGTTCAACATATTAGCCGCG 60.656 52.381 0.00 0.0 0.00 6.46 R
2624 6217 1.906966 GCGCAAAATCACATGAGTTCG 59.093 47.619 0.30 0.0 30.42 3.95 R
3111 6834 0.625683 AGGATGGAACCAGATGCCCT 60.626 55.000 0.00 0.0 0.00 5.19 R
3894 11741 0.107017 AGCAGCGGATACAAATGCCT 60.107 50.000 0.00 0.0 39.13 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.284123 GAGGTGATGAGCGCAACA 57.716 55.556 11.47 10.29 0.00 3.33
21 22 0.523072 GGTGATGAGCGCAACATGTT 59.477 50.000 21.16 4.92 0.00 2.71
24 25 2.658325 GTGATGAGCGCAACATGTTTTC 59.342 45.455 21.16 10.34 0.00 2.29
33 34 2.543653 GCAACATGTTTTCGGCTCACTT 60.544 45.455 8.77 0.00 0.00 3.16
39 40 1.264288 GTTTTCGGCTCACTTCAGTGG 59.736 52.381 7.11 0.00 45.65 4.00
47 48 3.467803 GCTCACTTCAGTGGTTGTAGTT 58.532 45.455 7.11 0.00 45.65 2.24
49 50 3.202906 TCACTTCAGTGGTTGTAGTTGC 58.797 45.455 7.11 0.00 45.65 4.17
51 52 1.531149 CTTCAGTGGTTGTAGTTGCCG 59.469 52.381 0.00 0.00 0.00 5.69
52 53 0.466543 TCAGTGGTTGTAGTTGCCGT 59.533 50.000 0.00 0.00 0.00 5.68
56 57 1.802365 GTGGTTGTAGTTGCCGTTAGG 59.198 52.381 0.00 0.00 41.62 2.69
59 60 1.196127 GTTGTAGTTGCCGTTAGGTGC 59.804 52.381 0.00 0.00 40.50 5.01
60 61 0.682852 TGTAGTTGCCGTTAGGTGCT 59.317 50.000 0.00 0.00 40.50 4.40
62 63 1.067071 GTAGTTGCCGTTAGGTGCTCT 60.067 52.381 0.00 0.00 40.50 4.09
64 65 1.831736 AGTTGCCGTTAGGTGCTCTAT 59.168 47.619 0.00 0.00 40.50 1.98
65 66 1.933853 GTTGCCGTTAGGTGCTCTATG 59.066 52.381 0.00 0.00 40.50 2.23
74 75 2.699160 AGGTGCTCTATGGACATGGAT 58.301 47.619 0.00 0.00 38.87 3.41
82 83 6.712095 TGCTCTATGGACATGGATGTAATTTC 59.288 38.462 0.00 0.00 41.95 2.17
368 369 5.819825 ATGAAAGACGATTAAAGGAAGGC 57.180 39.130 0.00 0.00 0.00 4.35
369 370 3.682858 TGAAAGACGATTAAAGGAAGGCG 59.317 43.478 0.00 0.00 0.00 5.52
374 375 4.153655 AGACGATTAAAGGAAGGCGTTTTC 59.846 41.667 0.00 0.00 33.64 2.29
431 439 2.789409 GGGACACCTGCTAGTTGATT 57.211 50.000 0.00 0.00 0.00 2.57
659 703 3.262405 AGGATAACCAACGGCTTAAGTCA 59.738 43.478 8.01 0.00 38.94 3.41
667 711 3.746045 ACGGCTTAAGTCACTCTCAAA 57.254 42.857 8.01 0.00 0.00 2.69
813 2601 4.628333 GGATGAATCCAAACATTGTTGCAG 59.372 41.667 2.13 0.00 46.38 4.41
829 2617 2.724520 CAGTCCTGCAAGCCTTGTT 58.275 52.632 6.28 0.00 0.00 2.83
830 2618 0.313043 CAGTCCTGCAAGCCTTGTTG 59.687 55.000 6.28 0.00 0.00 3.33
831 2619 0.183492 AGTCCTGCAAGCCTTGTTGA 59.817 50.000 6.28 0.00 0.00 3.18
832 2620 1.032014 GTCCTGCAAGCCTTGTTGAA 58.968 50.000 6.28 0.00 0.00 2.69
833 2621 1.408702 GTCCTGCAAGCCTTGTTGAAA 59.591 47.619 6.28 0.00 0.00 2.69
913 2701 1.605753 AACGAAACTGCCCTCTTTCC 58.394 50.000 0.00 0.00 0.00 3.13
919 2707 1.265454 ACTGCCCTCTTTCCCCTACG 61.265 60.000 0.00 0.00 0.00 3.51
923 2711 1.550130 CCCTCTTTCCCCTACGTGCA 61.550 60.000 0.00 0.00 0.00 4.57
1012 2806 2.622470 TCATCAGAGATGAAGAGCCTCG 59.378 50.000 7.20 0.00 32.52 4.63
1187 2988 2.263852 CAGCCTGAGCGCAGAGAA 59.736 61.111 19.95 0.00 45.17 2.87
1471 4142 4.369182 AGGTGCACGTTTATAGATACTGC 58.631 43.478 11.45 0.00 0.00 4.40
1490 4161 1.780806 CTGGCTGATCACGCTAGATG 58.219 55.000 18.92 0.00 38.11 2.90
1675 4591 4.081087 TGGACCTGCTTAATTACAGACCTC 60.081 45.833 4.98 0.00 35.90 3.85
1810 4736 2.799371 GAGAGAACCGCCGACGAT 59.201 61.111 0.00 0.00 43.93 3.73
2009 4971 7.129622 ACGTGAAATTTACAGTTACACACATG 58.870 34.615 0.00 0.00 0.00 3.21
2097 5060 2.671632 CGACGGTCTCCTTTCTTTCTCC 60.672 54.545 6.57 0.00 0.00 3.71
2579 6087 3.668447 TGCAAGTGAGATCCTTCAACTC 58.332 45.455 0.00 0.00 0.00 3.01
2624 6217 1.199097 CATTTTCACCCAGCACGTACC 59.801 52.381 0.00 0.00 0.00 3.34
2637 6230 2.876091 CACGTACCGAACTCATGTGAT 58.124 47.619 0.94 0.00 32.11 3.06
2757 6367 0.179108 GTAGCAGATCACGACCACCC 60.179 60.000 0.00 0.00 0.00 4.61
2759 6463 1.003839 GCAGATCACGACCACCCAA 60.004 57.895 0.00 0.00 0.00 4.12
2764 6468 3.561310 CAGATCACGACCACCCAATATTG 59.439 47.826 8.58 8.58 0.00 1.90
2846 6554 2.825532 CACCACCCAATAAACTTCCCTG 59.174 50.000 0.00 0.00 0.00 4.45
2851 6559 3.515104 ACCCAATAAACTTCCCTGCATTG 59.485 43.478 0.00 0.00 0.00 2.82
3034 6750 2.642311 TCACCCTGAAACTGATGGCTTA 59.358 45.455 0.00 0.00 0.00 3.09
3111 6834 0.636647 TCCTATCTGTGAGGGGAGCA 59.363 55.000 0.00 0.00 34.56 4.26
3114 6837 0.399091 TATCTGTGAGGGGAGCAGGG 60.399 60.000 0.00 0.00 0.00 4.45
3224 6947 3.869832 CAGTGAGTCATATGCCAAGACAG 59.130 47.826 0.00 0.00 34.80 3.51
3358 7125 3.735591 TGGTTAGAGTTGAAAAGGTCCG 58.264 45.455 0.00 0.00 0.00 4.79
3463 11303 4.887071 TCAGTGGTTACAATTGCACTTCTT 59.113 37.500 12.15 0.00 0.00 2.52
3493 11334 6.694447 TCTAATAGACAAAAACTGGCGTACT 58.306 36.000 0.00 0.00 38.56 2.73
3522 11363 3.510388 TTATGACTCTGTGAAGAGCCG 57.490 47.619 2.66 0.00 39.42 5.52
3575 11422 9.810870 ATAAATCTCTACTAATTACTCCTCCGT 57.189 33.333 0.00 0.00 0.00 4.69
3576 11423 7.513371 AATCTCTACTAATTACTCCTCCGTG 57.487 40.000 0.00 0.00 0.00 4.94
3577 11424 5.999044 TCTCTACTAATTACTCCTCCGTGT 58.001 41.667 0.00 0.00 0.00 4.49
3578 11425 6.421485 TCTCTACTAATTACTCCTCCGTGTT 58.579 40.000 0.00 0.00 0.00 3.32
3579 11426 6.541641 TCTCTACTAATTACTCCTCCGTGTTC 59.458 42.308 0.00 0.00 0.00 3.18
3580 11427 4.732672 ACTAATTACTCCTCCGTGTTCC 57.267 45.455 0.00 0.00 0.00 3.62
3581 11428 4.351127 ACTAATTACTCCTCCGTGTTCCT 58.649 43.478 0.00 0.00 0.00 3.36
3582 11429 5.513233 ACTAATTACTCCTCCGTGTTCCTA 58.487 41.667 0.00 0.00 0.00 2.94
3583 11430 5.954150 ACTAATTACTCCTCCGTGTTCCTAA 59.046 40.000 0.00 0.00 0.00 2.69
3584 11431 5.750352 AATTACTCCTCCGTGTTCCTAAA 57.250 39.130 0.00 0.00 0.00 1.85
3585 11432 5.952347 ATTACTCCTCCGTGTTCCTAAAT 57.048 39.130 0.00 0.00 0.00 1.40
3586 11433 7.427989 AATTACTCCTCCGTGTTCCTAAATA 57.572 36.000 0.00 0.00 0.00 1.40
3587 11434 7.613551 ATTACTCCTCCGTGTTCCTAAATAT 57.386 36.000 0.00 0.00 0.00 1.28
3588 11435 8.716674 ATTACTCCTCCGTGTTCCTAAATATA 57.283 34.615 0.00 0.00 0.00 0.86
3589 11436 8.537728 TTACTCCTCCGTGTTCCTAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
3590 11437 7.052142 ACTCCTCCGTGTTCCTAAATATAAG 57.948 40.000 0.00 0.00 0.00 1.73
3591 11438 6.610425 ACTCCTCCGTGTTCCTAAATATAAGT 59.390 38.462 0.00 0.00 0.00 2.24
3592 11439 7.047460 TCCTCCGTGTTCCTAAATATAAGTC 57.953 40.000 0.00 0.00 0.00 3.01
3593 11440 6.837568 TCCTCCGTGTTCCTAAATATAAGTCT 59.162 38.462 0.00 0.00 0.00 3.24
3594 11441 7.343833 TCCTCCGTGTTCCTAAATATAAGTCTT 59.656 37.037 0.00 0.00 0.00 3.01
3595 11442 7.985752 CCTCCGTGTTCCTAAATATAAGTCTTT 59.014 37.037 0.00 0.00 0.00 2.52
3596 11443 8.712285 TCCGTGTTCCTAAATATAAGTCTTTG 57.288 34.615 0.00 0.00 0.00 2.77
3597 11444 7.279313 TCCGTGTTCCTAAATATAAGTCTTTGC 59.721 37.037 0.00 0.00 0.00 3.68
3598 11445 7.065324 CCGTGTTCCTAAATATAAGTCTTTGCA 59.935 37.037 0.00 0.00 0.00 4.08
3599 11446 8.116753 CGTGTTCCTAAATATAAGTCTTTGCAG 58.883 37.037 0.00 0.00 0.00 4.41
3600 11447 9.162764 GTGTTCCTAAATATAAGTCTTTGCAGA 57.837 33.333 0.00 0.00 0.00 4.26
3601 11448 9.905713 TGTTCCTAAATATAAGTCTTTGCAGAT 57.094 29.630 0.00 0.00 0.00 2.90
3613 11460 8.985315 AAGTCTTTGCAGATATTCCATTATGA 57.015 30.769 0.00 0.00 0.00 2.15
3614 11461 8.985315 AGTCTTTGCAGATATTCCATTATGAA 57.015 30.769 0.00 0.00 0.00 2.57
3615 11462 8.844244 AGTCTTTGCAGATATTCCATTATGAAC 58.156 33.333 0.00 0.00 0.00 3.18
3616 11463 8.078596 GTCTTTGCAGATATTCCATTATGAACC 58.921 37.037 0.00 0.00 0.00 3.62
3617 11464 7.779326 TCTTTGCAGATATTCCATTATGAACCA 59.221 33.333 0.00 0.00 0.00 3.67
3618 11465 6.882610 TGCAGATATTCCATTATGAACCAC 57.117 37.500 0.00 0.00 0.00 4.16
3619 11466 6.363882 TGCAGATATTCCATTATGAACCACA 58.636 36.000 0.00 0.00 0.00 4.17
3620 11467 7.005902 TGCAGATATTCCATTATGAACCACAT 58.994 34.615 0.00 0.00 42.39 3.21
3621 11468 8.162746 TGCAGATATTCCATTATGAACCACATA 58.837 33.333 0.00 0.00 40.07 2.29
3622 11469 8.454106 GCAGATATTCCATTATGAACCACATAC 58.546 37.037 0.00 0.00 40.62 2.39
3623 11470 9.506018 CAGATATTCCATTATGAACCACATACA 57.494 33.333 0.00 0.00 40.62 2.29
3624 11471 9.730705 AGATATTCCATTATGAACCACATACAG 57.269 33.333 0.00 0.00 40.62 2.74
3625 11472 9.725019 GATATTCCATTATGAACCACATACAGA 57.275 33.333 0.00 0.00 40.62 3.41
3627 11474 7.806409 TTCCATTATGAACCACATACAGATG 57.194 36.000 0.00 0.00 40.62 2.90
3629 11476 8.028652 TCCATTATGAACCACATACAGATGTA 57.971 34.615 0.00 0.00 44.82 2.29
3630 11477 8.659527 TCCATTATGAACCACATACAGATGTAT 58.340 33.333 0.00 0.00 44.82 2.29
3670 11517 8.897752 AGAGTGTAGATTCATTTAATTTGCTCC 58.102 33.333 0.00 0.00 0.00 4.70
3671 11518 7.697691 AGTGTAGATTCATTTAATTTGCTCCG 58.302 34.615 0.00 0.00 0.00 4.63
3672 11519 7.336931 AGTGTAGATTCATTTAATTTGCTCCGT 59.663 33.333 0.00 0.00 0.00 4.69
3673 11520 8.609176 GTGTAGATTCATTTAATTTGCTCCGTA 58.391 33.333 0.00 0.00 0.00 4.02
3676 11523 8.225603 AGATTCATTTAATTTGCTCCGTATGT 57.774 30.769 0.00 0.00 0.00 2.29
3677 11524 9.337396 AGATTCATTTAATTTGCTCCGTATGTA 57.663 29.630 0.00 0.00 0.00 2.29
3678 11525 9.599322 GATTCATTTAATTTGCTCCGTATGTAG 57.401 33.333 0.00 0.00 0.00 2.74
3679 11526 8.500753 TTCATTTAATTTGCTCCGTATGTAGT 57.499 30.769 0.00 0.00 0.00 2.73
3680 11527 8.138365 TCATTTAATTTGCTCCGTATGTAGTC 57.862 34.615 0.00 0.00 0.00 2.59
3681 11528 6.913873 TTTAATTTGCTCCGTATGTAGTCC 57.086 37.500 0.00 0.00 0.00 3.85
3682 11529 4.481368 AATTTGCTCCGTATGTAGTCCA 57.519 40.909 0.00 0.00 0.00 4.02
3686 11533 5.801531 TTGCTCCGTATGTAGTCCATAAT 57.198 39.130 0.00 0.00 37.77 1.28
3688 11535 6.904463 TGCTCCGTATGTAGTCCATAATAA 57.096 37.500 0.00 0.00 37.77 1.40
3690 11537 7.728148 TGCTCCGTATGTAGTCCATAATAAAA 58.272 34.615 0.00 0.00 37.77 1.52
3692 11539 8.870879 GCTCCGTATGTAGTCCATAATAAAATC 58.129 37.037 0.00 0.00 37.77 2.17
3724 11571 7.909485 AGACTTATATTTAAGAACGGAGGGA 57.091 36.000 9.58 0.00 38.56 4.20
3725 11572 7.953752 AGACTTATATTTAAGAACGGAGGGAG 58.046 38.462 9.58 0.00 38.56 4.30
3726 11573 7.564292 AGACTTATATTTAAGAACGGAGGGAGT 59.436 37.037 9.58 0.00 38.56 3.85
3728 11575 9.377238 ACTTATATTTAAGAACGGAGGGAGTAT 57.623 33.333 9.58 0.00 38.56 2.12
3775 11622 4.024670 AGACGGCTTAAGTAGTCTTGGAT 58.975 43.478 21.31 7.05 40.64 3.41
3776 11623 4.113354 GACGGCTTAAGTAGTCTTGGATG 58.887 47.826 18.72 0.00 35.36 3.51
3777 11624 3.118738 ACGGCTTAAGTAGTCTTGGATGG 60.119 47.826 4.02 0.00 35.36 3.51
3778 11625 3.118738 CGGCTTAAGTAGTCTTGGATGGT 60.119 47.826 4.02 0.00 35.36 3.55
3779 11626 4.623171 CGGCTTAAGTAGTCTTGGATGGTT 60.623 45.833 4.02 0.00 35.36 3.67
3780 11627 5.394883 CGGCTTAAGTAGTCTTGGATGGTTA 60.395 44.000 4.02 0.00 35.36 2.85
3781 11628 6.592870 GGCTTAAGTAGTCTTGGATGGTTAT 58.407 40.000 4.02 0.00 35.36 1.89
3782 11629 7.470981 CGGCTTAAGTAGTCTTGGATGGTTATA 60.471 40.741 4.02 0.00 35.36 0.98
3783 11630 7.656542 GGCTTAAGTAGTCTTGGATGGTTATAC 59.343 40.741 4.02 0.00 35.36 1.47
3785 11632 6.496144 AAGTAGTCTTGGATGGTTATACCC 57.504 41.667 0.00 0.00 32.86 3.69
3786 11633 5.789535 AGTAGTCTTGGATGGTTATACCCT 58.210 41.667 0.00 0.00 37.50 4.34
3787 11634 6.210522 AGTAGTCTTGGATGGTTATACCCTT 58.789 40.000 0.00 0.00 37.50 3.95
3789 11636 5.036916 AGTCTTGGATGGTTATACCCTTCA 58.963 41.667 4.84 0.00 37.50 3.02
3790 11637 5.672194 AGTCTTGGATGGTTATACCCTTCAT 59.328 40.000 4.84 0.00 37.50 2.57
3791 11638 6.849697 AGTCTTGGATGGTTATACCCTTCATA 59.150 38.462 4.84 0.00 37.50 2.15
3792 11639 6.935208 GTCTTGGATGGTTATACCCTTCATAC 59.065 42.308 4.84 0.00 37.50 2.39
3793 11640 6.849697 TCTTGGATGGTTATACCCTTCATACT 59.150 38.462 4.84 0.00 37.50 2.12
3795 11642 8.570038 TTGGATGGTTATACCCTTCATACTTA 57.430 34.615 4.84 0.00 37.50 2.24
3797 11644 9.177927 TGGATGGTTATACCCTTCATACTTATT 57.822 33.333 4.84 0.00 37.50 1.40
3834 11681 8.735692 TCTTGAATTGATACATGAGCAATACA 57.264 30.769 0.00 0.00 43.38 2.29
3835 11682 9.176460 TCTTGAATTGATACATGAGCAATACAA 57.824 29.630 0.00 0.00 43.38 2.41
3836 11683 9.229784 CTTGAATTGATACATGAGCAATACAAC 57.770 33.333 0.00 0.00 43.38 3.32
3837 11684 8.278729 TGAATTGATACATGAGCAATACAACA 57.721 30.769 0.00 1.73 43.38 3.33
3838 11685 8.738106 TGAATTGATACATGAGCAATACAACAA 58.262 29.630 0.00 0.00 43.38 2.83
3839 11686 9.571810 GAATTGATACATGAGCAATACAACAAA 57.428 29.630 0.00 0.00 43.38 2.83
3840 11687 9.926158 AATTGATACATGAGCAATACAACAAAA 57.074 25.926 0.00 0.00 43.38 2.44
3841 11688 9.926158 ATTGATACATGAGCAATACAACAAAAA 57.074 25.926 0.00 0.00 42.37 1.94
3844 11691 8.970691 ATACATGAGCAATACAACAAAAAGAC 57.029 30.769 0.00 0.00 0.00 3.01
3845 11692 6.215845 ACATGAGCAATACAACAAAAAGACC 58.784 36.000 0.00 0.00 0.00 3.85
3846 11693 5.843673 TGAGCAATACAACAAAAAGACCA 57.156 34.783 0.00 0.00 0.00 4.02
3847 11694 6.214191 TGAGCAATACAACAAAAAGACCAA 57.786 33.333 0.00 0.00 0.00 3.67
3848 11695 6.039616 TGAGCAATACAACAAAAAGACCAAC 58.960 36.000 0.00 0.00 0.00 3.77
3849 11696 5.971763 AGCAATACAACAAAAAGACCAACA 58.028 33.333 0.00 0.00 0.00 3.33
3850 11697 5.810074 AGCAATACAACAAAAAGACCAACAC 59.190 36.000 0.00 0.00 0.00 3.32
3852 11699 6.975772 GCAATACAACAAAAAGACCAACACTA 59.024 34.615 0.00 0.00 0.00 2.74
3853 11700 7.043656 GCAATACAACAAAAAGACCAACACTAC 60.044 37.037 0.00 0.00 0.00 2.73
3854 11701 7.875327 ATACAACAAAAAGACCAACACTACT 57.125 32.000 0.00 0.00 0.00 2.57
3855 11702 5.949735 ACAACAAAAAGACCAACACTACTG 58.050 37.500 0.00 0.00 0.00 2.74
3856 11703 5.708230 ACAACAAAAAGACCAACACTACTGA 59.292 36.000 0.00 0.00 0.00 3.41
3857 11704 6.207810 ACAACAAAAAGACCAACACTACTGAA 59.792 34.615 0.00 0.00 0.00 3.02
3858 11705 6.827586 ACAAAAAGACCAACACTACTGAAA 57.172 33.333 0.00 0.00 0.00 2.69
3859 11706 7.222000 ACAAAAAGACCAACACTACTGAAAA 57.778 32.000 0.00 0.00 0.00 2.29
3860 11707 7.662897 ACAAAAAGACCAACACTACTGAAAAA 58.337 30.769 0.00 0.00 0.00 1.94
3862 11709 7.462571 AAAAGACCAACACTACTGAAAAACT 57.537 32.000 0.00 0.00 0.00 2.66
3864 11711 5.497474 AGACCAACACTACTGAAAAACTGT 58.503 37.500 0.00 0.00 35.06 3.55
3865 11712 5.944007 AGACCAACACTACTGAAAAACTGTT 59.056 36.000 0.00 0.00 33.04 3.16
3866 11713 6.433093 AGACCAACACTACTGAAAAACTGTTT 59.567 34.615 0.00 0.00 33.04 2.83
3867 11714 7.608761 AGACCAACACTACTGAAAAACTGTTTA 59.391 33.333 6.16 0.00 33.04 2.01
3868 11715 8.288689 ACCAACACTACTGAAAAACTGTTTAT 57.711 30.769 6.16 0.00 33.04 1.40
3869 11716 8.188139 ACCAACACTACTGAAAAACTGTTTATG 58.812 33.333 6.16 0.52 33.04 1.90
3870 11717 8.188139 CCAACACTACTGAAAAACTGTTTATGT 58.812 33.333 6.16 6.03 33.04 2.29
3871 11718 9.009327 CAACACTACTGAAAAACTGTTTATGTG 57.991 33.333 6.16 9.79 33.04 3.21
3872 11719 8.276252 ACACTACTGAAAAACTGTTTATGTGT 57.724 30.769 6.16 10.31 32.05 3.72
3874 11721 7.643764 CACTACTGAAAAACTGTTTATGTGTGG 59.356 37.037 6.16 8.26 33.04 4.17
3875 11722 6.767524 ACTGAAAAACTGTTTATGTGTGGA 57.232 33.333 6.16 0.00 0.00 4.02
3876 11723 7.164230 ACTGAAAAACTGTTTATGTGTGGAA 57.836 32.000 6.16 0.00 0.00 3.53
3879 11726 5.852282 AAAACTGTTTATGTGTGGAAGCT 57.148 34.783 6.16 0.00 0.00 3.74
3881 11728 4.085357 ACTGTTTATGTGTGGAAGCTCA 57.915 40.909 0.00 0.00 0.00 4.26
3883 11730 4.697352 ACTGTTTATGTGTGGAAGCTCATC 59.303 41.667 0.00 0.00 0.00 2.92
3884 11731 4.650734 TGTTTATGTGTGGAAGCTCATCA 58.349 39.130 0.00 0.00 0.00 3.07
3885 11732 5.069318 TGTTTATGTGTGGAAGCTCATCAA 58.931 37.500 0.00 0.00 0.00 2.57
3887 11734 5.885230 TTATGTGTGGAAGCTCATCAAAG 57.115 39.130 0.00 0.00 0.00 2.77
3888 11735 2.507484 TGTGTGGAAGCTCATCAAAGG 58.493 47.619 0.00 0.00 0.00 3.11
3889 11736 1.200948 GTGTGGAAGCTCATCAAAGGC 59.799 52.381 0.00 0.00 0.00 4.35
3890 11737 0.449388 GTGGAAGCTCATCAAAGGCG 59.551 55.000 0.00 0.00 0.00 5.52
3891 11738 1.308069 TGGAAGCTCATCAAAGGCGC 61.308 55.000 0.00 0.00 0.00 6.53
3892 11739 1.061570 GAAGCTCATCAAAGGCGCG 59.938 57.895 0.00 0.00 0.00 6.86
3893 11740 2.315038 GAAGCTCATCAAAGGCGCGG 62.315 60.000 8.83 0.00 0.00 6.46
3894 11741 2.803155 AAGCTCATCAAAGGCGCGGA 62.803 55.000 8.83 0.00 0.00 5.54
3901 11748 2.993471 CAAAGGCGCGGAGGCATTT 61.993 57.895 8.83 0.00 46.53 2.32
3902 11749 2.993471 AAAGGCGCGGAGGCATTTG 61.993 57.895 8.83 0.00 44.23 2.32
3905 11752 2.186826 GGCGCGGAGGCATTTGTAT 61.187 57.895 8.83 0.00 45.92 2.29
3906 11753 1.279840 GCGCGGAGGCATTTGTATC 59.720 57.895 8.83 0.00 39.92 2.24
3910 11757 3.403936 GGAGGCATTTGTATCCGCT 57.596 52.632 0.00 0.00 0.00 5.52
3911 11758 0.947244 GGAGGCATTTGTATCCGCTG 59.053 55.000 0.00 0.00 0.00 5.18
3913 11760 0.107017 AGGCATTTGTATCCGCTGCT 60.107 50.000 0.00 0.00 33.43 4.24
3914 11761 0.029834 GGCATTTGTATCCGCTGCTG 59.970 55.000 0.00 0.00 33.43 4.41
3915 11762 0.029834 GCATTTGTATCCGCTGCTGG 59.970 55.000 0.00 0.82 0.00 4.85
3916 11763 1.382522 CATTTGTATCCGCTGCTGGT 58.617 50.000 9.66 0.00 0.00 4.00
3917 11764 2.560504 CATTTGTATCCGCTGCTGGTA 58.439 47.619 9.66 0.00 0.00 3.25
3918 11765 2.772077 TTTGTATCCGCTGCTGGTAA 57.228 45.000 9.66 0.00 0.00 2.85
3920 11767 2.526304 TGTATCCGCTGCTGGTAATC 57.474 50.000 9.66 2.49 0.00 1.75
3921 11768 2.039418 TGTATCCGCTGCTGGTAATCT 58.961 47.619 9.66 0.00 0.00 2.40
3922 11769 2.224042 TGTATCCGCTGCTGGTAATCTG 60.224 50.000 9.66 0.00 0.00 2.90
3924 11771 2.182842 CCGCTGCTGGTAATCTGGC 61.183 63.158 0.00 0.00 0.00 4.85
3925 11772 2.182842 CGCTGCTGGTAATCTGGCC 61.183 63.158 0.00 0.00 0.00 5.36
3926 11773 1.077501 GCTGCTGGTAATCTGGCCA 60.078 57.895 4.71 4.71 0.00 5.36
3929 11776 0.698238 TGCTGGTAATCTGGCCACTT 59.302 50.000 0.00 0.30 0.00 3.16
3930 11777 1.912731 TGCTGGTAATCTGGCCACTTA 59.087 47.619 0.00 0.00 0.00 2.24
3943 11790 4.388499 ACTTACCAGTGGCGGGCG 62.388 66.667 9.78 0.00 0.00 6.13
3949 11796 4.054825 CAGTGGCGGGCGCAAAAT 62.055 61.111 17.69 0.00 44.11 1.82
3952 11799 3.067439 TGGCGGGCGCAAAATCAT 61.067 55.556 10.83 0.00 44.11 2.45
3953 11800 2.583045 GGCGGGCGCAAAATCATG 60.583 61.111 10.83 0.00 44.11 3.07
3954 11801 3.256833 GCGGGCGCAAAATCATGC 61.257 61.111 10.83 0.00 42.94 4.06
3957 11804 3.784746 GGCGCAAAATCATGCCAC 58.215 55.556 10.83 0.00 46.76 5.01
3958 11805 1.810853 GGCGCAAAATCATGCCACC 60.811 57.895 10.83 0.00 46.76 4.61
3959 11806 1.079956 GCGCAAAATCATGCCACCA 60.080 52.632 0.30 0.00 43.47 4.17
3960 11807 1.079875 GCGCAAAATCATGCCACCAG 61.080 55.000 0.30 0.00 43.47 4.00
3961 11808 0.244450 CGCAAAATCATGCCACCAGT 59.756 50.000 0.00 0.00 43.47 4.00
3962 11809 1.717194 GCAAAATCATGCCACCAGTG 58.283 50.000 0.00 0.00 40.49 3.66
3973 11820 2.032681 ACCAGTGGAGAAAGCGGC 59.967 61.111 18.40 0.00 0.00 6.53
3975 11822 3.121030 CAGTGGAGAAAGCGGCCG 61.121 66.667 24.05 24.05 0.00 6.13
3976 11823 4.394712 AGTGGAGAAAGCGGCCGG 62.395 66.667 29.38 8.95 0.00 6.13
3988 11835 4.123545 GGCCGGCCCATGTAGGTT 62.124 66.667 36.64 0.00 34.66 3.50
3989 11836 2.044352 GCCGGCCCATGTAGGTTT 60.044 61.111 18.11 0.00 34.66 3.27
3990 11837 1.680989 GCCGGCCCATGTAGGTTTT 60.681 57.895 18.11 0.00 34.66 2.43
4014 11861 7.659652 TTTTTCACCGTTTTCTCATTTTTGT 57.340 28.000 0.00 0.00 0.00 2.83
4015 11862 7.659652 TTTTCACCGTTTTCTCATTTTTGTT 57.340 28.000 0.00 0.00 0.00 2.83
4016 11863 7.659652 TTTCACCGTTTTCTCATTTTTGTTT 57.340 28.000 0.00 0.00 0.00 2.83
4017 11864 6.879188 TCACCGTTTTCTCATTTTTGTTTC 57.121 33.333 0.00 0.00 0.00 2.78
4018 11865 5.808030 TCACCGTTTTCTCATTTTTGTTTCC 59.192 36.000 0.00 0.00 0.00 3.13
4019 11866 5.810074 CACCGTTTTCTCATTTTTGTTTCCT 59.190 36.000 0.00 0.00 0.00 3.36
4020 11867 6.312672 CACCGTTTTCTCATTTTTGTTTCCTT 59.687 34.615 0.00 0.00 0.00 3.36
4021 11868 6.876789 ACCGTTTTCTCATTTTTGTTTCCTTT 59.123 30.769 0.00 0.00 0.00 3.11
4022 11869 7.389330 ACCGTTTTCTCATTTTTGTTTCCTTTT 59.611 29.630 0.00 0.00 0.00 2.27
4023 11870 8.233868 CCGTTTTCTCATTTTTGTTTCCTTTTT 58.766 29.630 0.00 0.00 0.00 1.94
4024 11871 9.261318 CGTTTTCTCATTTTTGTTTCCTTTTTC 57.739 29.630 0.00 0.00 0.00 2.29
4108 11955 3.053831 ACGGAAGTGGTAAATGGTCAG 57.946 47.619 0.00 0.00 46.97 3.51
4109 11956 2.370849 ACGGAAGTGGTAAATGGTCAGT 59.629 45.455 0.00 0.00 46.97 3.41
4110 11957 2.742053 CGGAAGTGGTAAATGGTCAGTG 59.258 50.000 0.00 0.00 0.00 3.66
4111 11958 3.081804 GGAAGTGGTAAATGGTCAGTGG 58.918 50.000 0.00 0.00 0.00 4.00
4112 11959 3.244770 GGAAGTGGTAAATGGTCAGTGGA 60.245 47.826 0.00 0.00 0.00 4.02
4113 11960 4.394729 GAAGTGGTAAATGGTCAGTGGAA 58.605 43.478 0.00 0.00 0.00 3.53
4114 11961 4.447138 AGTGGTAAATGGTCAGTGGAAA 57.553 40.909 0.00 0.00 0.00 3.13
4115 11962 4.998051 AGTGGTAAATGGTCAGTGGAAAT 58.002 39.130 0.00 0.00 0.00 2.17
4116 11963 5.393866 AGTGGTAAATGGTCAGTGGAAATT 58.606 37.500 0.00 0.00 0.00 1.82
4117 11964 5.243730 AGTGGTAAATGGTCAGTGGAAATTG 59.756 40.000 0.00 0.00 0.00 2.32
4118 11965 5.010617 GTGGTAAATGGTCAGTGGAAATTGT 59.989 40.000 0.00 0.00 0.00 2.71
4119 11966 5.242838 TGGTAAATGGTCAGTGGAAATTGTC 59.757 40.000 0.00 0.00 0.00 3.18
4120 11967 5.242838 GGTAAATGGTCAGTGGAAATTGTCA 59.757 40.000 0.00 0.00 0.00 3.58
4121 11968 5.867903 AAATGGTCAGTGGAAATTGTCAA 57.132 34.783 0.00 0.00 0.00 3.18
4122 11969 5.867903 AATGGTCAGTGGAAATTGTCAAA 57.132 34.783 0.00 0.00 0.00 2.69
4123 11970 5.867903 ATGGTCAGTGGAAATTGTCAAAA 57.132 34.783 0.00 0.00 0.00 2.44
4124 11971 5.867903 TGGTCAGTGGAAATTGTCAAAAT 57.132 34.783 0.00 0.00 0.00 1.82
4125 11972 6.968263 TGGTCAGTGGAAATTGTCAAAATA 57.032 33.333 0.00 0.00 0.00 1.40
4126 11973 6.980593 TGGTCAGTGGAAATTGTCAAAATAG 58.019 36.000 0.00 0.00 0.00 1.73
4127 11974 6.549364 TGGTCAGTGGAAATTGTCAAAATAGT 59.451 34.615 0.00 0.00 0.00 2.12
4128 11975 7.721842 TGGTCAGTGGAAATTGTCAAAATAGTA 59.278 33.333 0.00 0.00 0.00 1.82
4129 11976 8.573035 GGTCAGTGGAAATTGTCAAAATAGTAA 58.427 33.333 0.00 0.00 0.00 2.24
4130 11977 9.612620 GTCAGTGGAAATTGTCAAAATAGTAAG 57.387 33.333 0.00 0.00 0.00 2.34
4131 11978 8.792633 TCAGTGGAAATTGTCAAAATAGTAAGG 58.207 33.333 0.00 0.00 0.00 2.69
4132 11979 8.792633 CAGTGGAAATTGTCAAAATAGTAAGGA 58.207 33.333 0.00 0.00 0.00 3.36
4133 11980 8.793592 AGTGGAAATTGTCAAAATAGTAAGGAC 58.206 33.333 0.00 0.00 0.00 3.85
4134 11981 7.749126 GTGGAAATTGTCAAAATAGTAAGGACG 59.251 37.037 0.00 0.00 0.00 4.79
4135 11982 6.745907 GGAAATTGTCAAAATAGTAAGGACGC 59.254 38.462 0.00 0.00 0.00 5.19
4136 11983 7.361799 GGAAATTGTCAAAATAGTAAGGACGCT 60.362 37.037 0.00 0.00 0.00 5.07
4137 11984 8.556213 AAATTGTCAAAATAGTAAGGACGCTA 57.444 30.769 0.00 0.00 0.00 4.26
4138 11985 8.732746 AATTGTCAAAATAGTAAGGACGCTAT 57.267 30.769 0.00 0.00 0.00 2.97
4139 11986 8.732746 ATTGTCAAAATAGTAAGGACGCTATT 57.267 30.769 0.00 0.00 38.95 1.73
4140 11987 9.826574 ATTGTCAAAATAGTAAGGACGCTATTA 57.173 29.630 0.00 0.00 37.03 0.98
4141 11988 9.656040 TTGTCAAAATAGTAAGGACGCTATTAA 57.344 29.630 0.00 0.00 37.03 1.40
4142 11989 9.309516 TGTCAAAATAGTAAGGACGCTATTAAG 57.690 33.333 0.00 0.00 37.03 1.85
4143 11990 9.525409 GTCAAAATAGTAAGGACGCTATTAAGA 57.475 33.333 0.00 0.00 37.03 2.10
4144 11991 9.745880 TCAAAATAGTAAGGACGCTATTAAGAG 57.254 33.333 0.00 0.00 37.03 2.85
4145 11992 8.488764 CAAAATAGTAAGGACGCTATTAAGAGC 58.511 37.037 12.13 12.13 37.03 4.09
4146 11993 6.896021 ATAGTAAGGACGCTATTAAGAGCA 57.104 37.500 21.15 0.00 42.99 4.26
4147 11994 5.189659 AGTAAGGACGCTATTAAGAGCAG 57.810 43.478 21.15 15.47 42.99 4.24
4148 11995 2.517650 AGGACGCTATTAAGAGCAGC 57.482 50.000 21.15 11.87 42.99 5.25
4153 12000 2.225068 GCTATTAAGAGCAGCGTCCA 57.775 50.000 17.01 0.00 42.36 4.02
4154 12001 2.550978 GCTATTAAGAGCAGCGTCCAA 58.449 47.619 17.01 0.00 42.36 3.53
4155 12002 3.134458 GCTATTAAGAGCAGCGTCCAAT 58.866 45.455 17.01 0.00 42.36 3.16
4156 12003 3.185391 GCTATTAAGAGCAGCGTCCAATC 59.815 47.826 17.01 0.00 42.36 2.67
4157 12004 3.550437 ATTAAGAGCAGCGTCCAATCT 57.450 42.857 0.00 0.00 0.00 2.40
4158 12005 3.334583 TTAAGAGCAGCGTCCAATCTT 57.665 42.857 0.00 0.00 34.71 2.40
4159 12006 1.446907 AAGAGCAGCGTCCAATCTTG 58.553 50.000 0.00 0.00 0.00 3.02
4171 12018 1.959042 CAATCTTGGACGCCATAGCT 58.041 50.000 0.00 0.00 36.60 3.32
4172 12019 3.111853 CAATCTTGGACGCCATAGCTA 57.888 47.619 0.00 0.00 36.60 3.32
4173 12020 3.466836 CAATCTTGGACGCCATAGCTAA 58.533 45.455 0.00 0.00 36.60 3.09
4174 12021 2.890808 TCTTGGACGCCATAGCTAAG 57.109 50.000 0.00 0.00 36.60 2.18
4175 12022 2.108168 TCTTGGACGCCATAGCTAAGT 58.892 47.619 0.00 0.00 36.60 2.24
4176 12023 2.159099 TCTTGGACGCCATAGCTAAGTG 60.159 50.000 0.00 1.57 36.60 3.16
4177 12024 0.179084 TGGACGCCATAGCTAAGTGC 60.179 55.000 0.00 2.23 43.29 4.40
4178 12025 0.179084 GGACGCCATAGCTAAGTGCA 60.179 55.000 0.00 0.00 45.94 4.57
4179 12026 1.541233 GGACGCCATAGCTAAGTGCAT 60.541 52.381 0.00 0.00 45.94 3.96
4180 12027 2.213499 GACGCCATAGCTAAGTGCATT 58.787 47.619 0.00 0.00 45.94 3.56
4181 12028 2.213499 ACGCCATAGCTAAGTGCATTC 58.787 47.619 0.00 0.00 45.94 2.67
4182 12029 2.158900 ACGCCATAGCTAAGTGCATTCT 60.159 45.455 0.00 0.00 45.94 2.40
4183 12030 2.874701 CGCCATAGCTAAGTGCATTCTT 59.125 45.455 0.00 0.00 45.94 2.52
4184 12031 3.313526 CGCCATAGCTAAGTGCATTCTTT 59.686 43.478 0.00 0.00 45.94 2.52
4185 12032 4.201950 CGCCATAGCTAAGTGCATTCTTTT 60.202 41.667 0.00 0.00 45.94 2.27
4186 12033 5.007626 CGCCATAGCTAAGTGCATTCTTTTA 59.992 40.000 0.00 0.00 45.94 1.52
4187 12034 6.293626 CGCCATAGCTAAGTGCATTCTTTTAT 60.294 38.462 0.00 0.00 45.94 1.40
4188 12035 6.860023 GCCATAGCTAAGTGCATTCTTTTATG 59.140 38.462 0.00 0.34 45.94 1.90
4189 12036 7.365741 CCATAGCTAAGTGCATTCTTTTATGG 58.634 38.462 0.00 13.99 45.94 2.74
4190 12037 7.229306 CCATAGCTAAGTGCATTCTTTTATGGA 59.771 37.037 18.30 0.00 45.94 3.41
4191 12038 6.442513 AGCTAAGTGCATTCTTTTATGGAC 57.557 37.500 0.00 0.00 44.38 4.02
4194 12041 3.764885 GTGCATTCTTTTATGGACGCT 57.235 42.857 0.00 0.00 37.17 5.07
4195 12042 3.429085 GTGCATTCTTTTATGGACGCTG 58.571 45.455 0.00 0.00 37.17 5.18
4196 12043 3.081061 TGCATTCTTTTATGGACGCTGT 58.919 40.909 0.00 0.00 0.00 4.40
4197 12044 3.505680 TGCATTCTTTTATGGACGCTGTT 59.494 39.130 0.00 0.00 0.00 3.16
4198 12045 4.697828 TGCATTCTTTTATGGACGCTGTTA 59.302 37.500 0.00 0.00 0.00 2.41
4199 12046 5.028375 GCATTCTTTTATGGACGCTGTTAC 58.972 41.667 0.00 0.00 0.00 2.50
4200 12047 4.914312 TTCTTTTATGGACGCTGTTACG 57.086 40.909 0.00 0.00 39.50 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.376152 CATGTTGCGCTCATCACCTC 59.624 55.000 9.73 0.00 0.00 3.85
1 2 0.321919 ACATGTTGCGCTCATCACCT 60.322 50.000 9.73 0.00 0.00 4.00
2 3 0.523072 AACATGTTGCGCTCATCACC 59.477 50.000 11.07 0.00 0.00 4.02
3 4 2.336554 AAACATGTTGCGCTCATCAC 57.663 45.000 12.82 0.00 0.00 3.06
4 5 2.665245 CGAAAACATGTTGCGCTCATCA 60.665 45.455 12.82 2.77 0.00 3.07
5 6 1.906966 CGAAAACATGTTGCGCTCATC 59.093 47.619 12.82 1.68 0.00 2.92
6 7 1.401409 CCGAAAACATGTTGCGCTCAT 60.401 47.619 21.85 10.89 0.00 2.90
7 8 0.040514 CCGAAAACATGTTGCGCTCA 60.041 50.000 21.85 8.76 0.00 4.26
8 9 1.337110 GCCGAAAACATGTTGCGCTC 61.337 55.000 21.85 14.46 0.00 5.03
9 10 1.371635 GCCGAAAACATGTTGCGCT 60.372 52.632 21.85 2.11 0.00 5.92
10 11 1.337110 GAGCCGAAAACATGTTGCGC 61.337 55.000 21.85 14.84 0.00 6.09
11 12 0.040514 TGAGCCGAAAACATGTTGCG 60.041 50.000 20.85 20.85 0.00 4.85
12 13 1.001378 AGTGAGCCGAAAACATGTTGC 60.001 47.619 12.82 11.12 0.00 4.17
13 14 3.243035 TGAAGTGAGCCGAAAACATGTTG 60.243 43.478 12.82 0.08 0.00 3.33
14 15 2.948979 TGAAGTGAGCCGAAAACATGTT 59.051 40.909 4.92 4.92 0.00 2.71
15 16 2.549754 CTGAAGTGAGCCGAAAACATGT 59.450 45.455 0.00 0.00 0.00 3.21
16 17 2.549754 ACTGAAGTGAGCCGAAAACATG 59.450 45.455 0.00 0.00 0.00 3.21
17 18 2.851195 ACTGAAGTGAGCCGAAAACAT 58.149 42.857 0.00 0.00 0.00 2.71
33 34 0.466543 ACGGCAACTACAACCACTGA 59.533 50.000 0.00 0.00 0.00 3.41
39 40 1.196127 GCACCTAACGGCAACTACAAC 59.804 52.381 0.00 0.00 0.00 3.32
47 48 0.464036 CCATAGAGCACCTAACGGCA 59.536 55.000 0.00 0.00 0.00 5.69
49 50 1.754803 TGTCCATAGAGCACCTAACGG 59.245 52.381 0.00 0.00 0.00 4.44
51 52 3.388024 TCCATGTCCATAGAGCACCTAAC 59.612 47.826 0.00 0.00 0.00 2.34
52 53 3.653164 TCCATGTCCATAGAGCACCTAA 58.347 45.455 0.00 0.00 0.00 2.69
56 57 3.482156 ACATCCATGTCCATAGAGCAC 57.518 47.619 0.00 0.00 35.87 4.40
62 63 9.013229 GCAATAGAAATTACATCCATGTCCATA 57.987 33.333 0.00 0.00 41.97 2.74
64 65 7.062322 AGCAATAGAAATTACATCCATGTCCA 58.938 34.615 0.00 0.00 41.97 4.02
65 66 7.516198 AGCAATAGAAATTACATCCATGTCC 57.484 36.000 0.00 0.00 41.97 4.02
74 75 9.066892 AGAACACAAGAAGCAATAGAAATTACA 57.933 29.630 0.00 0.00 0.00 2.41
82 83 9.979270 CAGTATAAAGAACACAAGAAGCAATAG 57.021 33.333 0.00 0.00 0.00 1.73
346 347 4.332819 CGCCTTCCTTTAATCGTCTTTCAT 59.667 41.667 0.00 0.00 0.00 2.57
347 348 3.682858 CGCCTTCCTTTAATCGTCTTTCA 59.317 43.478 0.00 0.00 0.00 2.69
364 365 0.387565 AATTGCACCGAAAACGCCTT 59.612 45.000 0.00 0.00 0.00 4.35
366 367 1.885814 GCAATTGCACCGAAAACGCC 61.886 55.000 25.36 0.00 41.59 5.68
367 368 1.486801 GCAATTGCACCGAAAACGC 59.513 52.632 25.36 0.00 41.59 4.84
409 410 0.250513 CAACTAGCAGGTGTCCCTCC 59.749 60.000 0.00 0.00 39.89 4.30
410 411 1.267121 TCAACTAGCAGGTGTCCCTC 58.733 55.000 0.00 0.00 39.89 4.30
419 427 6.706055 TCACGAAGTTTAATCAACTAGCAG 57.294 37.500 0.00 0.00 45.77 4.24
431 439 5.065474 CCAAGTGGAAGTTTCACGAAGTTTA 59.935 40.000 8.68 0.00 39.86 2.01
439 447 2.024414 AGTGCCAAGTGGAAGTTTCAC 58.976 47.619 6.14 6.14 37.39 3.18
558 601 6.801862 CCTTGTTTAGAACGATGATTTGGAAC 59.198 38.462 0.00 0.00 0.00 3.62
594 637 6.551601 TGGGTTTTCAGCAGGTTCTTTAATTA 59.448 34.615 0.00 0.00 0.00 1.40
595 638 5.365314 TGGGTTTTCAGCAGGTTCTTTAATT 59.635 36.000 0.00 0.00 0.00 1.40
596 639 4.898861 TGGGTTTTCAGCAGGTTCTTTAAT 59.101 37.500 0.00 0.00 0.00 1.40
597 640 4.098807 GTGGGTTTTCAGCAGGTTCTTTAA 59.901 41.667 0.00 0.00 0.00 1.52
659 703 1.679032 GCGGCCAAGGTATTTGAGAGT 60.679 52.381 2.24 0.00 39.21 3.24
667 711 0.034574 TTGACATGCGGCCAAGGTAT 60.035 50.000 2.24 0.00 0.00 2.73
813 2601 1.032014 TTCAACAAGGCTTGCAGGAC 58.968 50.000 26.45 0.00 0.00 3.85
829 2617 2.811431 CGGGTAAGAACAGTGCATTTCA 59.189 45.455 0.00 0.00 0.00 2.69
830 2618 3.071479 TCGGGTAAGAACAGTGCATTTC 58.929 45.455 0.00 0.00 0.00 2.17
831 2619 3.134574 TCGGGTAAGAACAGTGCATTT 57.865 42.857 0.00 0.00 0.00 2.32
832 2620 2.851263 TCGGGTAAGAACAGTGCATT 57.149 45.000 0.00 0.00 0.00 3.56
833 2621 2.812011 GTTTCGGGTAAGAACAGTGCAT 59.188 45.455 0.00 0.00 0.00 3.96
875 2663 0.751452 TTGCATTGCAACAAGGAGCA 59.249 45.000 19.77 2.80 43.99 4.26
913 2701 0.386476 TATAGGCGTTGCACGTAGGG 59.614 55.000 9.76 0.00 44.73 3.53
1012 2806 2.349886 CGAGGAGCAAGAAGTACAATGC 59.650 50.000 0.00 0.00 39.06 3.56
1347 3148 4.803426 AGCGGCTTCTCGGAAGCG 62.803 66.667 23.42 20.09 43.89 4.68
1471 4142 1.068281 ACATCTAGCGTGATCAGCCAG 59.932 52.381 11.89 9.05 34.64 4.85
1490 4161 1.865865 CCCTGTGGATGCGTACATAC 58.134 55.000 0.00 0.00 36.35 2.39
1649 4533 4.636206 GTCTGTAATTAAGCAGGTCCAAGG 59.364 45.833 3.90 0.00 33.81 3.61
1810 4736 1.174078 TCACCAGGAAGACGTACGCA 61.174 55.000 16.72 0.00 0.00 5.24
2050 5012 8.975439 GTCGTTGTTCAGAAGAAATTAGTCTTA 58.025 33.333 0.00 0.00 37.98 2.10
2150 5113 1.646189 GGTCCAGAAGAAGTCGATGC 58.354 55.000 0.00 0.00 0.00 3.91
2422 5470 5.120208 TGTCGTTTTAGCTAGCAATTCAGAC 59.880 40.000 18.83 17.99 0.00 3.51
2579 6087 1.656429 GCGTTCAACATATTAGCCGCG 60.656 52.381 0.00 0.00 0.00 6.46
2624 6217 1.906966 GCGCAAAATCACATGAGTTCG 59.093 47.619 0.30 0.00 30.42 3.95
2764 6468 5.284079 TGTAGTTTTAAGGTGTCTGACGAC 58.716 41.667 2.98 2.95 40.64 4.34
2812 6520 4.348863 TGGGTGGTGAAATTTGAAATGG 57.651 40.909 0.00 0.00 0.00 3.16
2814 6522 8.217111 AGTTTATTGGGTGGTGAAATTTGAAAT 58.783 29.630 0.00 0.00 0.00 2.17
2822 6530 3.898741 GGGAAGTTTATTGGGTGGTGAAA 59.101 43.478 0.00 0.00 0.00 2.69
2846 6554 5.119931 TCAAAATCACCACTGTACAATGC 57.880 39.130 0.00 0.00 0.00 3.56
2851 6559 4.454504 ACGGAATCAAAATCACCACTGTAC 59.545 41.667 0.00 0.00 0.00 2.90
3111 6834 0.625683 AGGATGGAACCAGATGCCCT 60.626 55.000 0.00 0.00 0.00 5.19
3114 6837 1.064463 TGGAAGGATGGAACCAGATGC 60.064 52.381 0.00 0.00 0.00 3.91
3179 6902 0.813184 TTCTACGTAAGGTGGGAGCG 59.187 55.000 0.00 0.00 46.39 5.03
3224 6947 3.969795 GCCGTAGCAAACTAGCAAC 57.030 52.632 0.00 0.00 39.53 4.17
3289 7051 7.696992 AATTAAGCAAATAAACCTCTCCGAA 57.303 32.000 0.00 0.00 0.00 4.30
3291 7053 7.275560 CCAAAATTAAGCAAATAAACCTCTCCG 59.724 37.037 0.00 0.00 0.00 4.63
3292 7054 8.094548 ACCAAAATTAAGCAAATAAACCTCTCC 58.905 33.333 0.00 0.00 0.00 3.71
3322 7085 9.517609 CAACTCTAACCAGATACAAGTACATAC 57.482 37.037 0.00 0.00 0.00 2.39
3412 9180 7.488471 CCGTGGCCGTTTTAATTATTTGATTTA 59.512 33.333 0.00 0.00 0.00 1.40
3413 9181 6.311690 CCGTGGCCGTTTTAATTATTTGATTT 59.688 34.615 0.00 0.00 0.00 2.17
3414 9182 5.808030 CCGTGGCCGTTTTAATTATTTGATT 59.192 36.000 0.00 0.00 0.00 2.57
3416 9184 4.734917 CCGTGGCCGTTTTAATTATTTGA 58.265 39.130 0.00 0.00 0.00 2.69
3425 9193 1.669760 CTGAGCCGTGGCCGTTTTA 60.670 57.895 7.39 0.00 43.17 1.52
3463 11303 8.447833 CGCCAGTTTTTGTCTATTAGAAATACA 58.552 33.333 0.00 0.00 28.66 2.29
3488 11329 9.741168 CACAGAGTCATAAATTTACAAAGTACG 57.259 33.333 0.00 0.00 0.00 3.67
3568 11415 6.837568 AGACTTATATTTAGGAACACGGAGGA 59.162 38.462 0.00 0.00 0.00 3.71
3569 11416 7.052142 AGACTTATATTTAGGAACACGGAGG 57.948 40.000 0.00 0.00 0.00 4.30
3570 11417 8.818057 CAAAGACTTATATTTAGGAACACGGAG 58.182 37.037 0.00 0.00 0.00 4.63
3571 11418 7.279313 GCAAAGACTTATATTTAGGAACACGGA 59.721 37.037 0.00 0.00 0.00 4.69
3572 11419 7.065324 TGCAAAGACTTATATTTAGGAACACGG 59.935 37.037 0.00 0.00 0.00 4.94
3573 11420 7.970384 TGCAAAGACTTATATTTAGGAACACG 58.030 34.615 0.00 0.00 0.00 4.49
3574 11421 9.162764 TCTGCAAAGACTTATATTTAGGAACAC 57.837 33.333 0.00 0.00 0.00 3.32
3575 11422 9.905713 ATCTGCAAAGACTTATATTTAGGAACA 57.094 29.630 0.00 0.00 0.00 3.18
3588 11435 8.985315 TCATAATGGAATATCTGCAAAGACTT 57.015 30.769 0.00 0.00 0.00 3.01
3589 11436 8.844244 GTTCATAATGGAATATCTGCAAAGACT 58.156 33.333 0.00 0.00 0.00 3.24
3590 11437 8.078596 GGTTCATAATGGAATATCTGCAAAGAC 58.921 37.037 0.00 0.00 0.00 3.01
3591 11438 7.779326 TGGTTCATAATGGAATATCTGCAAAGA 59.221 33.333 0.00 0.00 0.00 2.52
3592 11439 7.864379 GTGGTTCATAATGGAATATCTGCAAAG 59.136 37.037 0.00 0.00 0.00 2.77
3593 11440 7.341512 TGTGGTTCATAATGGAATATCTGCAAA 59.658 33.333 0.00 0.00 0.00 3.68
3594 11441 6.832900 TGTGGTTCATAATGGAATATCTGCAA 59.167 34.615 0.00 0.00 0.00 4.08
3595 11442 6.363882 TGTGGTTCATAATGGAATATCTGCA 58.636 36.000 0.00 0.00 0.00 4.41
3596 11443 6.882610 TGTGGTTCATAATGGAATATCTGC 57.117 37.500 0.00 0.00 0.00 4.26
3597 11444 9.506018 TGTATGTGGTTCATAATGGAATATCTG 57.494 33.333 0.00 0.00 40.21 2.90
3598 11445 9.730705 CTGTATGTGGTTCATAATGGAATATCT 57.269 33.333 0.00 0.00 40.21 1.98
3599 11446 9.725019 TCTGTATGTGGTTCATAATGGAATATC 57.275 33.333 0.00 0.00 40.21 1.63
3601 11448 9.506018 CATCTGTATGTGGTTCATAATGGAATA 57.494 33.333 0.00 0.00 40.21 1.75
3602 11449 8.000709 ACATCTGTATGTGGTTCATAATGGAAT 58.999 33.333 0.00 0.00 44.79 3.01
3603 11450 7.345691 ACATCTGTATGTGGTTCATAATGGAA 58.654 34.615 0.00 0.00 44.79 3.53
3604 11451 6.899089 ACATCTGTATGTGGTTCATAATGGA 58.101 36.000 0.00 0.00 44.79 3.41
3605 11452 8.853077 ATACATCTGTATGTGGTTCATAATGG 57.147 34.615 2.10 0.00 45.99 3.16
3644 11491 8.897752 GGAGCAAATTAAATGAATCTACACTCT 58.102 33.333 0.00 0.00 0.00 3.24
3645 11492 7.852945 CGGAGCAAATTAAATGAATCTACACTC 59.147 37.037 0.00 0.00 0.00 3.51
3651 11498 8.225603 ACATACGGAGCAAATTAAATGAATCT 57.774 30.769 0.00 0.00 0.00 2.40
3654 11501 8.500753 ACTACATACGGAGCAAATTAAATGAA 57.499 30.769 0.00 0.00 0.00 2.57
3656 11503 7.011950 TGGACTACATACGGAGCAAATTAAATG 59.988 37.037 0.00 0.00 0.00 2.32
3658 11505 6.408035 TGGACTACATACGGAGCAAATTAAA 58.592 36.000 0.00 0.00 0.00 1.52
3663 11510 5.601583 TTATGGACTACATACGGAGCAAA 57.398 39.130 0.00 0.00 41.61 3.68
3664 11511 5.801531 ATTATGGACTACATACGGAGCAA 57.198 39.130 0.00 0.00 41.61 3.91
3698 11545 8.765517 TCCCTCCGTTCTTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 39.65 2.52
3699 11546 8.315220 TCCCTCCGTTCTTAAATATAAGTCTT 57.685 34.615 0.00 0.00 39.65 3.01
3700 11547 7.564292 ACTCCCTCCGTTCTTAAATATAAGTCT 59.436 37.037 0.00 0.00 39.65 3.24
3701 11548 7.724287 ACTCCCTCCGTTCTTAAATATAAGTC 58.276 38.462 0.00 0.00 39.65 3.01
3702 11549 7.672122 ACTCCCTCCGTTCTTAAATATAAGT 57.328 36.000 0.00 0.00 39.65 2.24
3709 11556 9.822185 GTTTATTATACTCCCTCCGTTCTTAAA 57.178 33.333 0.00 0.00 0.00 1.52
3710 11557 8.980596 TGTTTATTATACTCCCTCCGTTCTTAA 58.019 33.333 0.00 0.00 0.00 1.85
3711 11558 8.537728 TGTTTATTATACTCCCTCCGTTCTTA 57.462 34.615 0.00 0.00 0.00 2.10
3712 11559 7.427989 TGTTTATTATACTCCCTCCGTTCTT 57.572 36.000 0.00 0.00 0.00 2.52
3714 11561 8.496707 TTTTGTTTATTATACTCCCTCCGTTC 57.503 34.615 0.00 0.00 0.00 3.95
3715 11562 8.105197 ACTTTTGTTTATTATACTCCCTCCGTT 58.895 33.333 0.00 0.00 0.00 4.44
3716 11563 7.551617 CACTTTTGTTTATTATACTCCCTCCGT 59.448 37.037 0.00 0.00 0.00 4.69
3717 11564 7.551617 ACACTTTTGTTTATTATACTCCCTCCG 59.448 37.037 0.00 0.00 28.43 4.63
3718 11565 8.803397 ACACTTTTGTTTATTATACTCCCTCC 57.197 34.615 0.00 0.00 28.43 4.30
3808 11655 9.176460 TGTATTGCTCATGTATCAATTCAAGAA 57.824 29.630 12.40 0.00 33.13 2.52
3809 11656 8.735692 TGTATTGCTCATGTATCAATTCAAGA 57.264 30.769 12.40 0.00 33.13 3.02
3810 11657 9.229784 GTTGTATTGCTCATGTATCAATTCAAG 57.770 33.333 18.77 0.28 37.79 3.02
3811 11658 8.738106 TGTTGTATTGCTCATGTATCAATTCAA 58.262 29.630 16.57 16.57 36.13 2.69
3812 11659 8.278729 TGTTGTATTGCTCATGTATCAATTCA 57.721 30.769 12.40 11.20 33.13 2.57
3813 11660 9.571810 TTTGTTGTATTGCTCATGTATCAATTC 57.428 29.630 12.40 9.46 33.13 2.17
3814 11661 9.926158 TTTTGTTGTATTGCTCATGTATCAATT 57.074 25.926 12.40 0.00 33.13 2.32
3815 11662 9.926158 TTTTTGTTGTATTGCTCATGTATCAAT 57.074 25.926 12.02 12.02 35.02 2.57
3816 11663 9.409312 CTTTTTGTTGTATTGCTCATGTATCAA 57.591 29.630 0.00 0.00 0.00 2.57
3817 11664 8.791675 TCTTTTTGTTGTATTGCTCATGTATCA 58.208 29.630 0.00 0.00 0.00 2.15
3818 11665 9.065871 GTCTTTTTGTTGTATTGCTCATGTATC 57.934 33.333 0.00 0.00 0.00 2.24
3819 11666 8.028938 GGTCTTTTTGTTGTATTGCTCATGTAT 58.971 33.333 0.00 0.00 0.00 2.29
3820 11667 7.013750 TGGTCTTTTTGTTGTATTGCTCATGTA 59.986 33.333 0.00 0.00 0.00 2.29
3821 11668 6.183360 TGGTCTTTTTGTTGTATTGCTCATGT 60.183 34.615 0.00 0.00 0.00 3.21
3822 11669 6.215121 TGGTCTTTTTGTTGTATTGCTCATG 58.785 36.000 0.00 0.00 0.00 3.07
3826 11673 5.810074 GTGTTGGTCTTTTTGTTGTATTGCT 59.190 36.000 0.00 0.00 0.00 3.91
3827 11674 5.810074 AGTGTTGGTCTTTTTGTTGTATTGC 59.190 36.000 0.00 0.00 0.00 3.56
3828 11675 8.188139 AGTAGTGTTGGTCTTTTTGTTGTATTG 58.812 33.333 0.00 0.00 0.00 1.90
3830 11677 7.554835 TCAGTAGTGTTGGTCTTTTTGTTGTAT 59.445 33.333 0.00 0.00 0.00 2.29
3831 11678 6.879993 TCAGTAGTGTTGGTCTTTTTGTTGTA 59.120 34.615 0.00 0.00 0.00 2.41
3832 11679 5.708230 TCAGTAGTGTTGGTCTTTTTGTTGT 59.292 36.000 0.00 0.00 0.00 3.32
3833 11680 6.189677 TCAGTAGTGTTGGTCTTTTTGTTG 57.810 37.500 0.00 0.00 0.00 3.33
3834 11681 6.827586 TTCAGTAGTGTTGGTCTTTTTGTT 57.172 33.333 0.00 0.00 0.00 2.83
3835 11682 6.827586 TTTCAGTAGTGTTGGTCTTTTTGT 57.172 33.333 0.00 0.00 0.00 2.83
3836 11683 7.812669 AGTTTTTCAGTAGTGTTGGTCTTTTTG 59.187 33.333 0.00 0.00 0.00 2.44
3837 11684 7.812669 CAGTTTTTCAGTAGTGTTGGTCTTTTT 59.187 33.333 0.00 0.00 0.00 1.94
3838 11685 7.039993 ACAGTTTTTCAGTAGTGTTGGTCTTTT 60.040 33.333 0.00 0.00 0.00 2.27
3839 11686 6.433093 ACAGTTTTTCAGTAGTGTTGGTCTTT 59.567 34.615 0.00 0.00 0.00 2.52
3840 11687 5.944007 ACAGTTTTTCAGTAGTGTTGGTCTT 59.056 36.000 0.00 0.00 0.00 3.01
3841 11688 5.497474 ACAGTTTTTCAGTAGTGTTGGTCT 58.503 37.500 0.00 0.00 0.00 3.85
3844 11691 8.188139 ACATAAACAGTTTTTCAGTAGTGTTGG 58.812 33.333 3.25 0.00 37.82 3.77
3845 11692 9.009327 CACATAAACAGTTTTTCAGTAGTGTTG 57.991 33.333 3.25 0.00 37.82 3.33
3846 11693 8.736244 ACACATAAACAGTTTTTCAGTAGTGTT 58.264 29.630 3.25 0.00 39.05 3.32
3847 11694 8.181573 CACACATAAACAGTTTTTCAGTAGTGT 58.818 33.333 3.25 4.15 34.68 3.55
3848 11695 7.643764 CCACACATAAACAGTTTTTCAGTAGTG 59.356 37.037 3.25 3.56 0.00 2.74
3849 11696 7.554835 TCCACACATAAACAGTTTTTCAGTAGT 59.445 33.333 3.25 0.00 0.00 2.73
3850 11697 7.925993 TCCACACATAAACAGTTTTTCAGTAG 58.074 34.615 3.25 0.00 0.00 2.57
3852 11699 6.767524 TCCACACATAAACAGTTTTTCAGT 57.232 33.333 3.25 0.00 0.00 3.41
3853 11700 6.198966 GCTTCCACACATAAACAGTTTTTCAG 59.801 38.462 3.25 0.00 0.00 3.02
3854 11701 6.039616 GCTTCCACACATAAACAGTTTTTCA 58.960 36.000 3.25 0.00 0.00 2.69
3855 11702 6.273071 AGCTTCCACACATAAACAGTTTTTC 58.727 36.000 3.25 0.00 0.00 2.29
3856 11703 6.127479 TGAGCTTCCACACATAAACAGTTTTT 60.127 34.615 3.25 0.00 0.00 1.94
3857 11704 5.359576 TGAGCTTCCACACATAAACAGTTTT 59.640 36.000 3.25 0.00 0.00 2.43
3858 11705 4.887071 TGAGCTTCCACACATAAACAGTTT 59.113 37.500 3.49 3.49 0.00 2.66
3859 11706 4.460263 TGAGCTTCCACACATAAACAGTT 58.540 39.130 0.00 0.00 0.00 3.16
3860 11707 4.085357 TGAGCTTCCACACATAAACAGT 57.915 40.909 0.00 0.00 0.00 3.55
3862 11709 4.650734 TGATGAGCTTCCACACATAAACA 58.349 39.130 0.00 0.00 0.00 2.83
3864 11711 5.183713 CCTTTGATGAGCTTCCACACATAAA 59.816 40.000 0.00 0.00 0.00 1.40
3865 11712 4.701651 CCTTTGATGAGCTTCCACACATAA 59.298 41.667 0.00 0.00 0.00 1.90
3866 11713 4.264253 CCTTTGATGAGCTTCCACACATA 58.736 43.478 0.00 0.00 0.00 2.29
3867 11714 3.087031 CCTTTGATGAGCTTCCACACAT 58.913 45.455 0.00 0.00 0.00 3.21
3868 11715 2.507484 CCTTTGATGAGCTTCCACACA 58.493 47.619 0.00 0.00 0.00 3.72
3869 11716 1.200948 GCCTTTGATGAGCTTCCACAC 59.799 52.381 0.00 0.00 0.00 3.82
3870 11717 1.538047 GCCTTTGATGAGCTTCCACA 58.462 50.000 0.00 0.00 0.00 4.17
3871 11718 0.449388 CGCCTTTGATGAGCTTCCAC 59.551 55.000 0.00 0.00 0.00 4.02
3872 11719 1.308069 GCGCCTTTGATGAGCTTCCA 61.308 55.000 0.00 0.00 0.00 3.53
3874 11721 1.061570 CGCGCCTTTGATGAGCTTC 59.938 57.895 0.00 0.00 0.00 3.86
3875 11722 2.401766 CCGCGCCTTTGATGAGCTT 61.402 57.895 0.00 0.00 0.00 3.74
3876 11723 2.821366 CCGCGCCTTTGATGAGCT 60.821 61.111 0.00 0.00 0.00 4.09
3879 11726 2.125147 CCTCCGCGCCTTTGATGA 60.125 61.111 0.00 0.00 0.00 2.92
3881 11728 3.704231 ATGCCTCCGCGCCTTTGAT 62.704 57.895 0.00 0.00 38.08 2.57
3883 11730 2.993471 AAATGCCTCCGCGCCTTTG 61.993 57.895 0.00 0.00 38.08 2.77
3884 11731 2.676471 AAATGCCTCCGCGCCTTT 60.676 55.556 0.00 0.00 38.08 3.11
3885 11732 2.813226 TACAAATGCCTCCGCGCCTT 62.813 55.000 0.00 0.00 38.08 4.35
3887 11734 2.117941 GATACAAATGCCTCCGCGCC 62.118 60.000 0.00 0.00 38.08 6.53
3888 11735 1.279840 GATACAAATGCCTCCGCGC 59.720 57.895 0.00 0.00 38.08 6.86
3889 11736 1.831389 CGGATACAAATGCCTCCGCG 61.831 60.000 0.00 0.00 43.51 6.46
3890 11737 1.941812 CGGATACAAATGCCTCCGC 59.058 57.895 10.19 0.00 43.51 5.54
3892 11739 0.947244 CAGCGGATACAAATGCCTCC 59.053 55.000 0.00 0.00 0.00 4.30
3893 11740 0.308993 GCAGCGGATACAAATGCCTC 59.691 55.000 0.00 0.00 34.00 4.70
3894 11741 0.107017 AGCAGCGGATACAAATGCCT 60.107 50.000 0.00 0.00 39.13 4.75
3897 11744 1.382522 ACCAGCAGCGGATACAAATG 58.617 50.000 9.87 0.00 0.00 2.32
3899 11746 2.772077 TTACCAGCAGCGGATACAAA 57.228 45.000 9.87 0.00 0.00 2.83
3900 11747 2.434336 AGATTACCAGCAGCGGATACAA 59.566 45.455 9.87 0.54 0.00 2.41
3901 11748 2.039418 AGATTACCAGCAGCGGATACA 58.961 47.619 9.87 0.00 0.00 2.29
3902 11749 2.408050 CAGATTACCAGCAGCGGATAC 58.592 52.381 9.87 0.44 0.00 2.24
3905 11752 1.522092 CCAGATTACCAGCAGCGGA 59.478 57.895 9.87 0.00 0.00 5.54
3906 11753 2.182842 GCCAGATTACCAGCAGCGG 61.183 63.158 2.15 2.15 0.00 5.52
3908 11755 1.077501 TGGCCAGATTACCAGCAGC 60.078 57.895 0.00 0.00 0.00 5.25
3909 11756 0.254178 AGTGGCCAGATTACCAGCAG 59.746 55.000 5.11 0.00 36.38 4.24
3910 11757 0.698238 AAGTGGCCAGATTACCAGCA 59.302 50.000 5.11 0.00 36.38 4.41
3911 11758 2.289565 GTAAGTGGCCAGATTACCAGC 58.710 52.381 22.27 3.25 36.38 4.85
3926 11773 4.388499 CGCCCGCCACTGGTAAGT 62.388 66.667 0.00 0.00 36.98 2.24
3933 11780 3.747976 GATTTTGCGCCCGCCACT 61.748 61.111 4.18 0.00 41.09 4.00
3934 11781 3.355203 ATGATTTTGCGCCCGCCAC 62.355 57.895 4.18 0.00 41.09 5.01
3935 11782 3.067439 ATGATTTTGCGCCCGCCA 61.067 55.556 4.18 0.65 41.09 5.69
3936 11783 2.583045 CATGATTTTGCGCCCGCC 60.583 61.111 4.18 0.00 41.09 6.13
3937 11784 3.256833 GCATGATTTTGCGCCCGC 61.257 61.111 4.18 5.60 42.35 6.13
3939 11786 1.810853 GTGGCATGATTTTGCGCCC 60.811 57.895 4.18 0.00 44.22 6.13
3940 11787 1.810853 GGTGGCATGATTTTGCGCC 60.811 57.895 4.18 0.00 43.71 6.53
3941 11788 1.079875 CTGGTGGCATGATTTTGCGC 61.080 55.000 0.00 0.00 43.71 6.09
3943 11790 1.673626 CCACTGGTGGCATGATTTTGC 60.674 52.381 6.84 0.00 44.73 3.68
3944 11791 2.373540 CCACTGGTGGCATGATTTTG 57.626 50.000 6.84 0.00 44.73 2.44
3957 11804 2.747855 GGCCGCTTTCTCCACTGG 60.748 66.667 0.00 0.00 0.00 4.00
3958 11805 3.121030 CGGCCGCTTTCTCCACTG 61.121 66.667 14.67 0.00 0.00 3.66
3959 11806 4.394712 CCGGCCGCTTTCTCCACT 62.395 66.667 22.85 0.00 0.00 4.00
3971 11818 3.655350 AAACCTACATGGGCCGGCC 62.655 63.158 38.57 38.57 41.11 6.13
3973 11820 2.970205 AAAAACCTACATGGGCCGG 58.030 52.632 0.00 0.00 41.11 6.13
3990 11837 7.659652 ACAAAAATGAGAAAACGGTGAAAAA 57.340 28.000 0.00 0.00 0.00 1.94
3992 11839 7.148557 GGAAACAAAAATGAGAAAACGGTGAAA 60.149 33.333 0.00 0.00 0.00 2.69
3995 11842 5.810074 AGGAAACAAAAATGAGAAAACGGTG 59.190 36.000 0.00 0.00 0.00 4.94
3996 11843 5.972935 AGGAAACAAAAATGAGAAAACGGT 58.027 33.333 0.00 0.00 0.00 4.83
3997 11844 6.902224 AAGGAAACAAAAATGAGAAAACGG 57.098 33.333 0.00 0.00 0.00 4.44
3998 11845 9.261318 GAAAAAGGAAACAAAAATGAGAAAACG 57.739 29.630 0.00 0.00 0.00 3.60
4071 11918 9.765795 CCACTTCCGTAATTAGAGAATTCTTAT 57.234 33.333 9.87 4.44 36.62 1.73
4072 11919 8.755977 ACCACTTCCGTAATTAGAGAATTCTTA 58.244 33.333 9.87 1.66 36.62 2.10
4073 11920 7.621796 ACCACTTCCGTAATTAGAGAATTCTT 58.378 34.615 9.87 2.63 36.62 2.52
4074 11921 7.184067 ACCACTTCCGTAATTAGAGAATTCT 57.816 36.000 7.95 7.95 36.62 2.40
4075 11922 8.937634 TTACCACTTCCGTAATTAGAGAATTC 57.062 34.615 0.00 0.00 36.62 2.17
4076 11923 9.901172 ATTTACCACTTCCGTAATTAGAGAATT 57.099 29.630 0.00 0.00 38.79 2.17
4077 11924 9.326413 CATTTACCACTTCCGTAATTAGAGAAT 57.674 33.333 0.00 0.00 0.00 2.40
4078 11925 7.767198 CCATTTACCACTTCCGTAATTAGAGAA 59.233 37.037 0.00 0.00 0.00 2.87
4079 11926 7.093201 ACCATTTACCACTTCCGTAATTAGAGA 60.093 37.037 0.00 0.00 0.00 3.10
4080 11927 7.046033 ACCATTTACCACTTCCGTAATTAGAG 58.954 38.462 0.00 0.00 0.00 2.43
4081 11928 6.949715 ACCATTTACCACTTCCGTAATTAGA 58.050 36.000 0.00 0.00 0.00 2.10
4082 11929 6.819649 TGACCATTTACCACTTCCGTAATTAG 59.180 38.462 0.00 0.00 0.00 1.73
4083 11930 6.709281 TGACCATTTACCACTTCCGTAATTA 58.291 36.000 0.00 0.00 0.00 1.40
4084 11931 5.562635 TGACCATTTACCACTTCCGTAATT 58.437 37.500 0.00 0.00 0.00 1.40
4085 11932 5.168647 TGACCATTTACCACTTCCGTAAT 57.831 39.130 0.00 0.00 0.00 1.89
4086 11933 4.040706 ACTGACCATTTACCACTTCCGTAA 59.959 41.667 0.00 0.00 0.00 3.18
4087 11934 3.579586 ACTGACCATTTACCACTTCCGTA 59.420 43.478 0.00 0.00 0.00 4.02
4088 11935 2.370849 ACTGACCATTTACCACTTCCGT 59.629 45.455 0.00 0.00 0.00 4.69
4089 11936 2.742053 CACTGACCATTTACCACTTCCG 59.258 50.000 0.00 0.00 0.00 4.30
4090 11937 3.081804 CCACTGACCATTTACCACTTCC 58.918 50.000 0.00 0.00 0.00 3.46
4091 11938 4.015872 TCCACTGACCATTTACCACTTC 57.984 45.455 0.00 0.00 0.00 3.01
4092 11939 4.447138 TTCCACTGACCATTTACCACTT 57.553 40.909 0.00 0.00 0.00 3.16
4093 11940 4.447138 TTTCCACTGACCATTTACCACT 57.553 40.909 0.00 0.00 0.00 4.00
4094 11941 5.010617 ACAATTTCCACTGACCATTTACCAC 59.989 40.000 0.00 0.00 0.00 4.16
4095 11942 5.144100 ACAATTTCCACTGACCATTTACCA 58.856 37.500 0.00 0.00 0.00 3.25
4096 11943 5.242838 TGACAATTTCCACTGACCATTTACC 59.757 40.000 0.00 0.00 0.00 2.85
4097 11944 6.325919 TGACAATTTCCACTGACCATTTAC 57.674 37.500 0.00 0.00 0.00 2.01
4098 11945 6.968263 TTGACAATTTCCACTGACCATTTA 57.032 33.333 0.00 0.00 0.00 1.40
4099 11946 5.867903 TTGACAATTTCCACTGACCATTT 57.132 34.783 0.00 0.00 0.00 2.32
4100 11947 5.867903 TTTGACAATTTCCACTGACCATT 57.132 34.783 0.00 0.00 0.00 3.16
4101 11948 5.867903 TTTTGACAATTTCCACTGACCAT 57.132 34.783 0.00 0.00 0.00 3.55
4102 11949 5.867903 ATTTTGACAATTTCCACTGACCA 57.132 34.783 0.00 0.00 0.00 4.02
4103 11950 6.981722 ACTATTTTGACAATTTCCACTGACC 58.018 36.000 0.00 0.00 0.00 4.02
4104 11951 9.612620 CTTACTATTTTGACAATTTCCACTGAC 57.387 33.333 0.00 0.00 0.00 3.51
4105 11952 8.792633 CCTTACTATTTTGACAATTTCCACTGA 58.207 33.333 0.00 0.00 0.00 3.41
4106 11953 8.792633 TCCTTACTATTTTGACAATTTCCACTG 58.207 33.333 0.00 0.00 0.00 3.66
4107 11954 8.793592 GTCCTTACTATTTTGACAATTTCCACT 58.206 33.333 0.00 0.00 0.00 4.00
4108 11955 7.749126 CGTCCTTACTATTTTGACAATTTCCAC 59.251 37.037 0.00 0.00 0.00 4.02
4109 11956 7.574217 GCGTCCTTACTATTTTGACAATTTCCA 60.574 37.037 0.00 0.00 0.00 3.53
4110 11957 6.745907 GCGTCCTTACTATTTTGACAATTTCC 59.254 38.462 0.00 0.00 0.00 3.13
4111 11958 7.527457 AGCGTCCTTACTATTTTGACAATTTC 58.473 34.615 0.00 0.00 0.00 2.17
4112 11959 7.448748 AGCGTCCTTACTATTTTGACAATTT 57.551 32.000 0.00 0.00 0.00 1.82
4113 11960 8.732746 ATAGCGTCCTTACTATTTTGACAATT 57.267 30.769 0.00 0.00 0.00 2.32
4114 11961 8.732746 AATAGCGTCCTTACTATTTTGACAAT 57.267 30.769 0.00 0.00 35.98 2.71
4115 11962 9.656040 TTAATAGCGTCCTTACTATTTTGACAA 57.344 29.630 0.00 0.00 39.29 3.18
4116 11963 9.309516 CTTAATAGCGTCCTTACTATTTTGACA 57.690 33.333 0.00 0.00 39.29 3.58
4117 11964 9.525409 TCTTAATAGCGTCCTTACTATTTTGAC 57.475 33.333 0.00 0.00 39.29 3.18
4118 11965 9.745880 CTCTTAATAGCGTCCTTACTATTTTGA 57.254 33.333 0.00 0.00 39.29 2.69
4119 11966 8.488764 GCTCTTAATAGCGTCCTTACTATTTTG 58.511 37.037 0.00 0.00 39.29 2.44
4120 11967 8.202137 TGCTCTTAATAGCGTCCTTACTATTTT 58.798 33.333 8.17 0.00 45.85 1.82
4121 11968 7.723324 TGCTCTTAATAGCGTCCTTACTATTT 58.277 34.615 8.17 0.00 45.85 1.40
4122 11969 7.286215 TGCTCTTAATAGCGTCCTTACTATT 57.714 36.000 8.17 0.00 45.85 1.73
4123 11970 6.570764 GCTGCTCTTAATAGCGTCCTTACTAT 60.571 42.308 8.17 0.00 45.85 2.12
4124 11971 5.278364 GCTGCTCTTAATAGCGTCCTTACTA 60.278 44.000 8.17 0.00 45.85 1.82
4125 11972 4.500035 GCTGCTCTTAATAGCGTCCTTACT 60.500 45.833 8.17 0.00 45.85 2.24
4126 11973 3.736759 GCTGCTCTTAATAGCGTCCTTAC 59.263 47.826 8.17 0.00 45.85 2.34
4127 11974 3.978687 GCTGCTCTTAATAGCGTCCTTA 58.021 45.455 8.17 0.00 45.85 2.69
4128 11975 2.827652 GCTGCTCTTAATAGCGTCCTT 58.172 47.619 8.17 0.00 45.85 3.36
4129 11976 2.517650 GCTGCTCTTAATAGCGTCCT 57.482 50.000 8.17 0.00 45.85 3.85
4134 11981 2.225068 TGGACGCTGCTCTTAATAGC 57.775 50.000 5.92 5.92 43.08 2.97
4135 11982 4.626042 AGATTGGACGCTGCTCTTAATAG 58.374 43.478 0.00 0.00 0.00 1.73
4136 11983 4.672587 AGATTGGACGCTGCTCTTAATA 57.327 40.909 0.00 0.00 0.00 0.98
4137 11984 3.550437 AGATTGGACGCTGCTCTTAAT 57.450 42.857 0.00 1.16 0.00 1.40
4138 11985 3.002791 CAAGATTGGACGCTGCTCTTAA 58.997 45.455 0.00 0.00 0.00 1.85
4139 11986 2.621338 CAAGATTGGACGCTGCTCTTA 58.379 47.619 0.00 0.00 0.00 2.10
4140 11987 1.446907 CAAGATTGGACGCTGCTCTT 58.553 50.000 0.00 0.00 0.00 2.85
4141 11988 3.149899 CAAGATTGGACGCTGCTCT 57.850 52.632 0.00 0.00 0.00 4.09
4151 11998 1.475751 AGCTATGGCGTCCAAGATTGG 60.476 52.381 5.18 5.18 45.85 3.16
4152 11999 1.959042 AGCTATGGCGTCCAAGATTG 58.041 50.000 2.68 0.00 44.37 2.67
4153 12000 3.134804 ACTTAGCTATGGCGTCCAAGATT 59.865 43.478 11.03 0.00 44.37 2.40
4154 12001 2.700897 ACTTAGCTATGGCGTCCAAGAT 59.299 45.455 11.03 4.14 44.37 2.40
4155 12002 2.108168 ACTTAGCTATGGCGTCCAAGA 58.892 47.619 11.03 0.00 44.37 3.02
4156 12003 2.205074 CACTTAGCTATGGCGTCCAAG 58.795 52.381 11.03 1.21 44.37 3.61
4157 12004 1.742411 GCACTTAGCTATGGCGTCCAA 60.742 52.381 11.03 0.00 44.37 3.53
4158 12005 0.179084 GCACTTAGCTATGGCGTCCA 60.179 55.000 11.03 1.01 44.37 4.02
4159 12006 0.179084 TGCACTTAGCTATGGCGTCC 60.179 55.000 11.03 0.00 45.94 4.79
4160 12007 1.871080 ATGCACTTAGCTATGGCGTC 58.129 50.000 11.03 0.00 45.94 5.19
4161 12008 2.158900 AGAATGCACTTAGCTATGGCGT 60.159 45.455 11.03 9.42 45.94 5.68
4162 12009 2.487934 AGAATGCACTTAGCTATGGCG 58.512 47.619 11.03 3.37 45.94 5.69
4163 12010 4.907879 AAAGAATGCACTTAGCTATGGC 57.092 40.909 11.03 11.00 45.94 4.40
4164 12011 7.229306 TCCATAAAAGAATGCACTTAGCTATGG 59.771 37.037 16.92 16.92 45.94 2.74
4165 12012 8.072567 GTCCATAAAAGAATGCACTTAGCTATG 58.927 37.037 5.13 5.13 45.94 2.23
4166 12013 7.041780 CGTCCATAAAAGAATGCACTTAGCTAT 60.042 37.037 0.00 0.00 45.94 2.97
4167 12014 6.257849 CGTCCATAAAAGAATGCACTTAGCTA 59.742 38.462 0.00 0.00 45.94 3.32
4168 12015 5.065218 CGTCCATAAAAGAATGCACTTAGCT 59.935 40.000 0.00 0.00 45.94 3.32
4169 12016 5.266242 CGTCCATAAAAGAATGCACTTAGC 58.734 41.667 0.00 0.00 45.96 3.09
4170 12017 5.065218 AGCGTCCATAAAAGAATGCACTTAG 59.935 40.000 0.00 0.00 0.00 2.18
4171 12018 4.941263 AGCGTCCATAAAAGAATGCACTTA 59.059 37.500 0.00 0.00 0.00 2.24
4172 12019 3.758554 AGCGTCCATAAAAGAATGCACTT 59.241 39.130 0.00 0.00 0.00 3.16
4173 12020 3.127548 CAGCGTCCATAAAAGAATGCACT 59.872 43.478 0.00 0.00 0.00 4.40
4174 12021 3.119849 ACAGCGTCCATAAAAGAATGCAC 60.120 43.478 0.00 0.00 0.00 4.57
4175 12022 3.081061 ACAGCGTCCATAAAAGAATGCA 58.919 40.909 0.00 0.00 0.00 3.96
4176 12023 3.764885 ACAGCGTCCATAAAAGAATGC 57.235 42.857 0.00 0.00 0.00 3.56
4177 12024 5.163893 ACGTAACAGCGTCCATAAAAGAATG 60.164 40.000 0.00 0.00 41.71 2.67
4178 12025 4.933400 ACGTAACAGCGTCCATAAAAGAAT 59.067 37.500 0.00 0.00 41.71 2.40
4179 12026 4.309099 ACGTAACAGCGTCCATAAAAGAA 58.691 39.130 0.00 0.00 41.71 2.52
4180 12027 3.916761 ACGTAACAGCGTCCATAAAAGA 58.083 40.909 0.00 0.00 41.71 2.52
4181 12028 5.517411 TCATACGTAACAGCGTCCATAAAAG 59.483 40.000 0.00 0.00 44.55 2.27
4182 12029 5.409211 TCATACGTAACAGCGTCCATAAAA 58.591 37.500 0.00 0.00 44.55 1.52
4183 12030 4.996344 TCATACGTAACAGCGTCCATAAA 58.004 39.130 0.00 0.00 44.55 1.40
4184 12031 4.635833 TCATACGTAACAGCGTCCATAA 57.364 40.909 0.00 0.00 44.55 1.90
4185 12032 4.542735 CATCATACGTAACAGCGTCCATA 58.457 43.478 0.00 0.00 44.55 2.74
4186 12033 3.381045 CATCATACGTAACAGCGTCCAT 58.619 45.455 0.00 0.00 44.55 3.41
4187 12034 2.804647 CATCATACGTAACAGCGTCCA 58.195 47.619 0.00 0.00 44.55 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.