Multiple sequence alignment - TraesCS5A01G242900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G242900 chr5A 100.000 3149 0 0 1 3149 457879667 457882815 0.000000e+00 5816.0
1 TraesCS5A01G242900 chr5A 79.475 419 65 16 1407 1819 457539796 457539393 8.600000e-71 278.0
2 TraesCS5A01G242900 chr5A 76.712 292 38 21 1414 1696 457511817 457512087 5.480000e-28 135.0
3 TraesCS5A01G242900 chr5D 91.251 1726 89 34 717 2420 356188593 356190278 0.000000e+00 2294.0
4 TraesCS5A01G242900 chr5D 86.789 492 29 12 16 499 356188048 356188511 1.670000e-142 516.0
5 TraesCS5A01G242900 chr5D 80.570 386 60 10 1398 1780 355677179 355677552 1.850000e-72 283.0
6 TraesCS5A01G242900 chr5D 79.396 364 48 21 2718 3057 356190918 356191278 6.790000e-57 231.0
7 TraesCS5A01G242900 chr5D 75.945 291 42 19 1414 1696 355797579 355797309 1.190000e-24 124.0
8 TraesCS5A01G242900 chr5D 78.710 155 26 5 3 157 301632941 301632794 2.590000e-16 97.1
9 TraesCS5A01G242900 chr5D 88.312 77 5 2 2594 2666 356190283 356190359 4.330000e-14 89.8
10 TraesCS5A01G242900 chr5B 91.387 1428 78 18 763 2167 420857308 420855903 0.000000e+00 1914.0
11 TraesCS5A01G242900 chr5B 80.620 387 58 12 1398 1780 420386430 420386803 1.850000e-72 283.0
12 TraesCS5A01G242900 chr5B 91.667 180 15 0 2701 2880 421096218 421096397 1.880000e-62 250.0
13 TraesCS5A01G242900 chr5B 87.958 191 18 4 2716 2905 421158963 421159149 1.470000e-53 220.0
14 TraesCS5A01G242900 chr5B 90.909 165 10 4 2434 2595 412686484 412686646 1.900000e-52 217.0
15 TraesCS5A01G242900 chr5B 86.207 174 7 7 390 552 420857606 420857439 4.180000e-39 172.0
16 TraesCS5A01G242900 chr5B 90.816 98 9 0 556 653 659172732 659172829 7.090000e-27 132.0
17 TraesCS5A01G242900 chr4B 94.000 150 7 2 2440 2587 19746505 19746356 3.160000e-55 226.0
18 TraesCS5A01G242900 chr4B 89.655 174 8 4 2424 2589 284234580 284234409 2.460000e-51 213.0
19 TraesCS5A01G242900 chr4B 88.785 107 8 4 556 660 51117734 51117838 9.170000e-26 128.0
20 TraesCS5A01G242900 chr2A 90.286 175 9 6 2421 2589 310408106 310407934 4.090000e-54 222.0
21 TraesCS5A01G242900 chr7D 92.763 152 7 3 2440 2587 339017138 339016987 1.900000e-52 217.0
22 TraesCS5A01G242900 chr7D 74.434 442 95 14 1274 1709 125856444 125856873 1.160000e-39 174.0
23 TraesCS5A01G242900 chr7D 83.077 130 17 4 556 683 5568457 5568331 2.570000e-21 113.0
24 TraesCS5A01G242900 chr3A 90.798 163 9 5 2434 2590 582946265 582946427 2.460000e-51 213.0
25 TraesCS5A01G242900 chr3D 89.535 172 8 8 2426 2589 591102410 591102579 3.180000e-50 209.0
26 TraesCS5A01G242900 chr3D 85.938 128 5 3 556 683 184559635 184559749 1.190000e-24 124.0
27 TraesCS5A01G242900 chr2D 89.941 169 8 3 2440 2599 560959640 560959472 3.180000e-50 209.0
28 TraesCS5A01G242900 chr6D 88.701 177 9 5 2422 2590 13557736 13557563 4.120000e-49 206.0
29 TraesCS5A01G242900 chr7B 74.664 446 91 16 1272 1709 87029012 87029443 8.970000e-41 178.0
30 TraesCS5A01G242900 chr7B 88.889 126 10 4 556 680 47343768 47343890 5.440000e-33 152.0
31 TraesCS5A01G242900 chr7B 83.838 99 15 1 1260 1357 87125921 87126019 3.340000e-15 93.5
32 TraesCS5A01G242900 chr1A 85.938 128 16 2 556 682 200574660 200574534 5.480000e-28 135.0
33 TraesCS5A01G242900 chr4D 92.222 90 7 0 556 645 366574485 366574574 9.170000e-26 128.0
34 TraesCS5A01G242900 chr6B 92.135 89 7 0 1190 1278 690905480 690905568 3.300000e-25 126.0
35 TraesCS5A01G242900 chr2B 92.135 89 7 0 556 644 672024924 672025012 3.300000e-25 126.0
36 TraesCS5A01G242900 chr4A 88.776 98 11 0 556 653 572547280 572547183 1.530000e-23 121.0
37 TraesCS5A01G242900 chr7A 83.838 99 15 1 1260 1357 127371163 127371261 3.340000e-15 93.5
38 TraesCS5A01G242900 chr1D 95.000 40 1 1 644 683 229041181 229041219 9.430000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G242900 chr5A 457879667 457882815 3148 False 5816.0 5816 100.000 1 3149 1 chr5A.!!$F2 3148
1 TraesCS5A01G242900 chr5D 356188048 356191278 3230 False 782.7 2294 86.437 16 3057 4 chr5D.!!$F2 3041
2 TraesCS5A01G242900 chr5B 420855903 420857606 1703 True 1043.0 1914 88.797 390 2167 2 chr5B.!!$R1 1777

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
651 671 0.03254 CTGCCAAACCTCTGCCAAAC 59.967 55.0 0.0 0.0 0.0 2.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2572 2664 0.455005 CGTTCTACTCCCTCCGTTCC 59.545 60.0 0.0 0.0 0.0 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 6.825284 TTATTTGCACTGATGTTGTGTTTG 57.175 33.333 0.00 0.00 37.70 2.93
70 71 6.035866 GCACTGATGTTGTGTTTGAATTTCAA 59.964 34.615 7.74 7.74 37.70 2.69
108 109 9.882856 GAGAACATTAAACTTCTTACGTATTCG 57.117 33.333 0.00 0.00 43.34 3.34
117 118 7.045725 ACTTCTTACGTATTCGAATTGTGTG 57.954 36.000 17.19 11.83 40.62 3.82
118 119 5.444586 TCTTACGTATTCGAATTGTGTGC 57.555 39.130 17.19 0.00 40.62 4.57
119 120 4.924462 TCTTACGTATTCGAATTGTGTGCA 59.076 37.500 17.19 0.00 40.62 4.57
120 121 3.449322 ACGTATTCGAATTGTGTGCAC 57.551 42.857 17.19 10.75 40.62 4.57
121 122 2.803386 ACGTATTCGAATTGTGTGCACA 59.197 40.909 17.42 17.42 40.62 4.57
122 123 3.435327 ACGTATTCGAATTGTGTGCACAT 59.565 39.130 24.69 6.59 39.67 3.21
123 124 3.780279 CGTATTCGAATTGTGTGCACATG 59.220 43.478 24.69 9.08 39.16 3.21
124 125 4.435386 CGTATTCGAATTGTGTGCACATGA 60.435 41.667 24.69 15.01 39.16 3.07
127 128 3.824151 TCGAATTGTGTGCACATGATTG 58.176 40.909 24.69 17.58 41.52 2.67
128 129 3.252944 TCGAATTGTGTGCACATGATTGT 59.747 39.130 24.69 6.62 41.52 2.71
129 130 3.982701 CGAATTGTGTGCACATGATTGTT 59.017 39.130 24.69 12.03 41.52 2.83
130 131 4.445052 CGAATTGTGTGCACATGATTGTTT 59.555 37.500 24.69 9.94 41.52 2.83
131 132 5.628606 CGAATTGTGTGCACATGATTGTTTA 59.371 36.000 24.69 1.36 41.52 2.01
132 133 6.398830 CGAATTGTGTGCACATGATTGTTTAC 60.399 38.462 24.69 11.83 41.52 2.01
133 134 3.882982 TGTGTGCACATGATTGTTTACG 58.117 40.909 24.69 0.00 36.21 3.18
134 135 3.313803 TGTGTGCACATGATTGTTTACGT 59.686 39.130 24.69 0.00 36.21 3.57
135 136 4.201960 TGTGTGCACATGATTGTTTACGTT 60.202 37.500 24.69 0.00 36.21 3.99
136 137 4.378616 GTGTGCACATGATTGTTTACGTTC 59.621 41.667 24.69 0.00 32.34 3.95
137 138 4.274705 TGTGCACATGATTGTTTACGTTCT 59.725 37.500 17.42 0.00 32.34 3.01
178 179 9.691362 TGCCAAAGAAAAGTTCTCAATTAATAC 57.309 29.630 0.00 0.00 39.61 1.89
179 180 9.140286 GCCAAAGAAAAGTTCTCAATTAATACC 57.860 33.333 0.00 0.00 39.61 2.73
180 181 9.341899 CCAAAGAAAAGTTCTCAATTAATACCG 57.658 33.333 0.00 0.00 39.61 4.02
181 182 9.893305 CAAAGAAAAGTTCTCAATTAATACCGT 57.107 29.630 0.00 0.00 39.61 4.83
188 189 7.844009 AGTTCTCAATTAATACCGTACTTCCA 58.156 34.615 0.00 0.00 0.00 3.53
189 190 8.483758 AGTTCTCAATTAATACCGTACTTCCAT 58.516 33.333 0.00 0.00 0.00 3.41
193 194 6.698329 TCAATTAATACCGTACTTCCATCGTG 59.302 38.462 0.00 0.00 0.00 4.35
195 196 2.925578 TACCGTACTTCCATCGTGTG 57.074 50.000 0.00 0.00 0.00 3.82
209 210 4.866921 CATCGTGTGGAATTACCTATCGA 58.133 43.478 0.00 0.00 39.86 3.59
230 233 5.103898 TCGATATGCATCTAGGAGGGAGTAT 60.104 44.000 0.19 0.00 0.00 2.12
231 234 5.009510 CGATATGCATCTAGGAGGGAGTATG 59.990 48.000 0.19 0.00 0.00 2.39
232 235 3.619900 TGCATCTAGGAGGGAGTATGT 57.380 47.619 0.00 0.00 0.00 2.29
242 245 3.514309 GGAGGGAGTATGTGTGTGTAAGT 59.486 47.826 0.00 0.00 0.00 2.24
249 252 7.130269 GGAGTATGTGTGTGTAAGTTTGAAAC 58.870 38.462 0.00 0.00 0.00 2.78
256 259 5.410746 TGTGTGTAAGTTTGAAACCGTGTTA 59.589 36.000 4.14 0.00 0.00 2.41
257 260 5.961263 GTGTGTAAGTTTGAAACCGTGTTAG 59.039 40.000 4.14 0.00 0.00 2.34
258 261 4.965762 GTGTAAGTTTGAAACCGTGTTAGC 59.034 41.667 4.14 0.00 0.00 3.09
259 262 4.877251 TGTAAGTTTGAAACCGTGTTAGCT 59.123 37.500 4.14 0.00 0.00 3.32
260 263 3.963383 AGTTTGAAACCGTGTTAGCTG 57.037 42.857 4.14 0.00 0.00 4.24
261 264 3.275999 AGTTTGAAACCGTGTTAGCTGT 58.724 40.909 4.14 0.00 0.00 4.40
262 265 3.064820 AGTTTGAAACCGTGTTAGCTGTG 59.935 43.478 4.14 0.00 0.00 3.66
263 266 1.588674 TGAAACCGTGTTAGCTGTGG 58.411 50.000 0.00 0.00 0.00 4.17
264 267 0.872388 GAAACCGTGTTAGCTGTGGG 59.128 55.000 0.00 0.00 0.00 4.61
278 281 2.029918 GCTGTGGGAGGATTTGACAAAC 60.030 50.000 1.94 0.00 0.00 2.93
279 282 3.221771 CTGTGGGAGGATTTGACAAACA 58.778 45.455 1.94 0.00 0.00 2.83
327 332 6.633500 CTGTGGGACAGTGATTTTCTTTAA 57.367 37.500 0.00 0.00 41.80 1.52
396 405 4.467795 AGGAAATCTGCTGTAGTTGCTCTA 59.532 41.667 0.00 0.00 0.00 2.43
444 453 0.534412 CAGACTCCGCTGGAACTGAT 59.466 55.000 17.55 0.00 37.93 2.90
445 454 0.534412 AGACTCCGCTGGAACTGATG 59.466 55.000 0.00 0.00 0.00 3.07
446 455 0.532573 GACTCCGCTGGAACTGATGA 59.467 55.000 0.00 0.00 0.00 2.92
508 518 2.374170 ACCGGTGAAAGGAACCTTGTAT 59.626 45.455 6.12 0.00 36.26 2.29
512 522 4.142038 GGTGAAAGGAACCTTGTATGTGT 58.858 43.478 6.88 0.00 36.26 3.72
552 572 5.036737 CGCACAAATTATTGTCAATCCTCC 58.963 41.667 0.07 0.00 46.78 4.30
553 573 5.163622 CGCACAAATTATTGTCAATCCTCCT 60.164 40.000 0.07 0.00 46.78 3.69
554 574 6.625740 CGCACAAATTATTGTCAATCCTCCTT 60.626 38.462 0.07 0.00 46.78 3.36
555 575 6.532657 GCACAAATTATTGTCAATCCTCCTTG 59.467 38.462 0.07 3.43 46.78 3.61
556 576 6.532657 CACAAATTATTGTCAATCCTCCTTGC 59.467 38.462 0.07 0.00 46.78 4.01
560 580 4.796038 ATTGTCAATCCTCCTTGCTTTG 57.204 40.909 0.00 0.00 0.00 2.77
563 583 3.569701 TGTCAATCCTCCTTGCTTTGTTC 59.430 43.478 0.00 0.00 0.00 3.18
564 584 2.813754 TCAATCCTCCTTGCTTTGTTCG 59.186 45.455 0.00 0.00 0.00 3.95
565 585 1.826385 ATCCTCCTTGCTTTGTTCGG 58.174 50.000 0.00 0.00 0.00 4.30
568 588 1.266989 CCTCCTTGCTTTGTTCGGTTC 59.733 52.381 0.00 0.00 0.00 3.62
569 589 1.266989 CTCCTTGCTTTGTTCGGTTCC 59.733 52.381 0.00 0.00 0.00 3.62
570 590 1.028905 CCTTGCTTTGTTCGGTTCCA 58.971 50.000 0.00 0.00 0.00 3.53
571 591 1.269051 CCTTGCTTTGTTCGGTTCCAC 60.269 52.381 0.00 0.00 0.00 4.02
572 592 0.741915 TTGCTTTGTTCGGTTCCACC 59.258 50.000 0.00 0.00 34.05 4.61
573 593 1.104577 TGCTTTGTTCGGTTCCACCC 61.105 55.000 0.00 0.00 33.75 4.61
574 594 1.802337 GCTTTGTTCGGTTCCACCCC 61.802 60.000 0.00 0.00 33.75 4.95
576 596 4.629523 TGTTCGGTTCCACCCCGC 62.630 66.667 0.00 0.00 45.09 6.13
596 616 4.186911 CAAGGGGATTGGAGGGGA 57.813 61.111 0.00 0.00 35.08 4.81
597 617 2.650764 CAAGGGGATTGGAGGGGAT 58.349 57.895 0.00 0.00 35.08 3.85
598 618 0.936691 CAAGGGGATTGGAGGGGATT 59.063 55.000 0.00 0.00 35.08 3.01
599 619 1.291939 CAAGGGGATTGGAGGGGATTT 59.708 52.381 0.00 0.00 35.08 2.17
600 620 0.936691 AGGGGATTGGAGGGGATTTG 59.063 55.000 0.00 0.00 0.00 2.32
601 621 0.105504 GGGGATTGGAGGGGATTTGG 60.106 60.000 0.00 0.00 0.00 3.28
602 622 0.105504 GGGATTGGAGGGGATTTGGG 60.106 60.000 0.00 0.00 0.00 4.12
603 623 0.105504 GGATTGGAGGGGATTTGGGG 60.106 60.000 0.00 0.00 0.00 4.96
604 624 0.105504 GATTGGAGGGGATTTGGGGG 60.106 60.000 0.00 0.00 0.00 5.40
622 642 3.031013 GGGGGAATTTGACTTGTATGGG 58.969 50.000 0.00 0.00 0.00 4.00
623 643 3.309556 GGGGGAATTTGACTTGTATGGGA 60.310 47.826 0.00 0.00 0.00 4.37
624 644 4.546674 GGGGAATTTGACTTGTATGGGAT 58.453 43.478 0.00 0.00 0.00 3.85
625 645 4.962362 GGGGAATTTGACTTGTATGGGATT 59.038 41.667 0.00 0.00 0.00 3.01
626 646 5.425217 GGGGAATTTGACTTGTATGGGATTT 59.575 40.000 0.00 0.00 0.00 2.17
627 647 6.609616 GGGGAATTTGACTTGTATGGGATTTA 59.390 38.462 0.00 0.00 0.00 1.40
628 648 7.125053 GGGGAATTTGACTTGTATGGGATTTAA 59.875 37.037 0.00 0.00 0.00 1.52
629 649 8.704668 GGGAATTTGACTTGTATGGGATTTAAT 58.295 33.333 0.00 0.00 0.00 1.40
630 650 9.750125 GGAATTTGACTTGTATGGGATTTAATC 57.250 33.333 0.00 0.00 0.00 1.75
641 661 3.819564 GGATTTAATCCCTGCCAAACC 57.180 47.619 12.74 0.00 43.88 3.27
642 662 3.374764 GGATTTAATCCCTGCCAAACCT 58.625 45.455 12.74 0.00 43.88 3.50
643 663 3.384789 GGATTTAATCCCTGCCAAACCTC 59.615 47.826 12.74 0.00 43.88 3.85
644 664 3.825908 TTTAATCCCTGCCAAACCTCT 57.174 42.857 0.00 0.00 0.00 3.69
645 665 2.806945 TAATCCCTGCCAAACCTCTG 57.193 50.000 0.00 0.00 0.00 3.35
646 666 0.613012 AATCCCTGCCAAACCTCTGC 60.613 55.000 0.00 0.00 0.00 4.26
647 667 2.505364 ATCCCTGCCAAACCTCTGCC 62.505 60.000 0.00 0.00 0.00 4.85
648 668 2.115910 CCTGCCAAACCTCTGCCA 59.884 61.111 0.00 0.00 0.00 4.92
649 669 1.531365 CCTGCCAAACCTCTGCCAA 60.531 57.895 0.00 0.00 0.00 4.52
650 670 1.114722 CCTGCCAAACCTCTGCCAAA 61.115 55.000 0.00 0.00 0.00 3.28
651 671 0.032540 CTGCCAAACCTCTGCCAAAC 59.967 55.000 0.00 0.00 0.00 2.93
652 672 1.367471 GCCAAACCTCTGCCAAACC 59.633 57.895 0.00 0.00 0.00 3.27
653 673 2.049435 CCAAACCTCTGCCAAACCC 58.951 57.895 0.00 0.00 0.00 4.11
654 674 1.471829 CCAAACCTCTGCCAAACCCC 61.472 60.000 0.00 0.00 0.00 4.95
655 675 0.469892 CAAACCTCTGCCAAACCCCT 60.470 55.000 0.00 0.00 0.00 4.79
656 676 0.264657 AAACCTCTGCCAAACCCCTT 59.735 50.000 0.00 0.00 0.00 3.95
657 677 0.178961 AACCTCTGCCAAACCCCTTC 60.179 55.000 0.00 0.00 0.00 3.46
658 678 1.360393 ACCTCTGCCAAACCCCTTCA 61.360 55.000 0.00 0.00 0.00 3.02
659 679 0.178964 CCTCTGCCAAACCCCTTCAA 60.179 55.000 0.00 0.00 0.00 2.69
660 680 1.703411 CTCTGCCAAACCCCTTCAAA 58.297 50.000 0.00 0.00 0.00 2.69
661 681 2.250924 CTCTGCCAAACCCCTTCAAAT 58.749 47.619 0.00 0.00 0.00 2.32
662 682 2.232208 CTCTGCCAAACCCCTTCAAATC 59.768 50.000 0.00 0.00 0.00 2.17
663 683 1.276138 CTGCCAAACCCCTTCAAATCC 59.724 52.381 0.00 0.00 0.00 3.01
664 684 0.613260 GCCAAACCCCTTCAAATCCC 59.387 55.000 0.00 0.00 0.00 3.85
665 685 1.831290 GCCAAACCCCTTCAAATCCCT 60.831 52.381 0.00 0.00 0.00 4.20
666 686 1.901833 CCAAACCCCTTCAAATCCCTG 59.098 52.381 0.00 0.00 0.00 4.45
667 687 2.608623 CAAACCCCTTCAAATCCCTGT 58.391 47.619 0.00 0.00 0.00 4.00
668 688 2.299867 CAAACCCCTTCAAATCCCTGTG 59.700 50.000 0.00 0.00 0.00 3.66
673 693 1.812571 CCTTCAAATCCCTGTGAACCG 59.187 52.381 0.00 0.00 30.73 4.44
674 694 2.552155 CCTTCAAATCCCTGTGAACCGA 60.552 50.000 0.00 0.00 30.73 4.69
676 696 2.500229 TCAAATCCCTGTGAACCGAAC 58.500 47.619 0.00 0.00 0.00 3.95
679 699 0.762418 ATCCCTGTGAACCGAACACA 59.238 50.000 0.00 0.00 44.34 3.72
694 714 1.302033 CACAGCCACCACTCCTGAC 60.302 63.158 0.00 0.00 0.00 3.51
699 719 1.168714 GCCACCACTCCTGACATTTC 58.831 55.000 0.00 0.00 0.00 2.17
703 723 0.995024 CCACTCCTGACATTTCCCCT 59.005 55.000 0.00 0.00 0.00 4.79
707 727 2.041755 ACTCCTGACATTTCCCCTTTCC 59.958 50.000 0.00 0.00 0.00 3.13
708 728 1.357761 TCCTGACATTTCCCCTTTCCC 59.642 52.381 0.00 0.00 0.00 3.97
709 729 1.077005 CCTGACATTTCCCCTTTCCCA 59.923 52.381 0.00 0.00 0.00 4.37
710 730 2.492567 CCTGACATTTCCCCTTTCCCAA 60.493 50.000 0.00 0.00 0.00 4.12
711 731 3.444029 CTGACATTTCCCCTTTCCCAAT 58.556 45.455 0.00 0.00 0.00 3.16
712 732 3.840078 CTGACATTTCCCCTTTCCCAATT 59.160 43.478 0.00 0.00 0.00 2.32
713 733 3.582208 TGACATTTCCCCTTTCCCAATTG 59.418 43.478 0.00 0.00 0.00 2.32
714 734 3.582647 GACATTTCCCCTTTCCCAATTGT 59.417 43.478 4.43 0.00 0.00 2.71
715 735 4.757692 ACATTTCCCCTTTCCCAATTGTA 58.242 39.130 4.43 0.00 0.00 2.41
716 736 5.158889 ACATTTCCCCTTTCCCAATTGTAA 58.841 37.500 4.43 0.00 0.00 2.41
717 737 5.790096 ACATTTCCCCTTTCCCAATTGTAAT 59.210 36.000 4.43 0.00 0.00 1.89
718 738 6.274436 ACATTTCCCCTTTCCCAATTGTAATT 59.726 34.615 4.43 0.00 0.00 1.40
745 765 2.512515 GCATCCAGACTCCACCGC 60.513 66.667 0.00 0.00 0.00 5.68
747 767 1.153489 CATCCAGACTCCACCGCTG 60.153 63.158 0.00 0.00 0.00 5.18
749 769 1.892819 ATCCAGACTCCACCGCTGTG 61.893 60.000 0.56 0.56 42.39 3.66
761 781 1.226547 CGCTGTGCAAAACCAACGT 60.227 52.632 0.00 0.00 0.00 3.99
776 812 0.317479 AACGTCGGAGAAAGGTCAGG 59.683 55.000 0.00 0.00 39.69 3.86
781 817 0.390472 CGGAGAAAGGTCAGGTCAGC 60.390 60.000 0.00 0.00 0.00 4.26
803 839 1.139095 CACGCTCCTACTTCCCGAC 59.861 63.158 0.00 0.00 0.00 4.79
804 840 2.050934 ACGCTCCTACTTCCCGACC 61.051 63.158 0.00 0.00 0.00 4.79
805 841 2.783288 CGCTCCTACTTCCCGACCC 61.783 68.421 0.00 0.00 0.00 4.46
808 844 2.039951 CCTACTTCCCGACCCCCA 59.960 66.667 0.00 0.00 0.00 4.96
834 886 2.555199 CAAATCCACTCCCGTCATCTC 58.445 52.381 0.00 0.00 0.00 2.75
844 896 2.233922 TCCCGTCATCTCTTCTCAAACC 59.766 50.000 0.00 0.00 0.00 3.27
879 931 2.784347 GCTATCCTATCCAAAGCACCC 58.216 52.381 0.00 0.00 33.38 4.61
896 948 6.331369 AGCACCCCATTATTTATTCATTCG 57.669 37.500 0.00 0.00 0.00 3.34
897 949 5.833131 AGCACCCCATTATTTATTCATTCGT 59.167 36.000 0.00 0.00 0.00 3.85
901 953 8.359642 CACCCCATTATTTATTCATTCGTTCAT 58.640 33.333 0.00 0.00 0.00 2.57
904 956 9.964303 CCCATTATTTATTCATTCGTTCATTCA 57.036 29.630 0.00 0.00 0.00 2.57
913 965 2.432206 TCGTTCATTCAGCTTCGTCA 57.568 45.000 0.00 0.00 0.00 4.35
914 966 2.959516 TCGTTCATTCAGCTTCGTCAT 58.040 42.857 0.00 0.00 0.00 3.06
916 968 2.284684 CGTTCATTCAGCTTCGTCATCG 60.285 50.000 0.00 0.00 38.55 3.84
942 998 4.021104 CCAAATCCCACTTCTTTTTCTCCC 60.021 45.833 0.00 0.00 0.00 4.30
959 1015 2.779981 CCCCCTTGCCAAATCCCT 59.220 61.111 0.00 0.00 0.00 4.20
1023 1107 0.674581 TGTCCAAGATGAAGCGGCTG 60.675 55.000 1.81 0.00 0.00 4.85
1354 1438 4.910585 GGATGTACCTGCCGCCGG 62.911 72.222 0.00 0.00 35.41 6.13
1387 1471 2.273776 GGGGCAGGAAGGAGAAGC 59.726 66.667 0.00 0.00 0.00 3.86
1404 1488 2.046892 CAGAAGGACCTGCCGGTG 60.047 66.667 3.79 0.00 45.73 4.94
1473 1557 1.475682 CCCAAGTACCACGACTACCTC 59.524 57.143 0.00 0.00 0.00 3.85
1592 1676 2.281484 GCTCAACTGGGCCGTCAA 60.281 61.111 0.00 0.00 0.00 3.18
1704 1788 2.100797 CACAACATGGCGATGCGG 59.899 61.111 8.81 3.73 32.14 5.69
2090 2174 4.101448 CTTCCTGGACCAGCCCGG 62.101 72.222 16.72 3.34 42.12 5.73
2160 2244 3.450115 GGCTAGGACACGGACGCT 61.450 66.667 0.00 0.00 0.00 5.07
2161 2245 2.572284 GCTAGGACACGGACGCTT 59.428 61.111 0.00 0.00 0.00 4.68
2162 2246 1.080025 GCTAGGACACGGACGCTTT 60.080 57.895 0.00 0.00 0.00 3.51
2163 2247 1.352156 GCTAGGACACGGACGCTTTG 61.352 60.000 0.00 0.00 0.00 2.77
2164 2248 0.736325 CTAGGACACGGACGCTTTGG 60.736 60.000 0.00 0.00 0.00 3.28
2165 2249 1.466025 TAGGACACGGACGCTTTGGT 61.466 55.000 0.00 0.00 0.00 3.67
2166 2250 2.604174 GGACACGGACGCTTTGGTG 61.604 63.158 0.00 0.00 36.50 4.17
2188 2272 1.304134 GTGTTGGTGGGGTGGGATC 60.304 63.158 0.00 0.00 0.00 3.36
2196 2280 3.396570 GGGTGGGATCGGTCGGTT 61.397 66.667 0.00 0.00 0.00 4.44
2197 2281 2.125269 GGTGGGATCGGTCGGTTG 60.125 66.667 0.00 0.00 0.00 3.77
2198 2282 2.125269 GTGGGATCGGTCGGTTGG 60.125 66.667 0.00 0.00 0.00 3.77
2199 2283 2.284039 TGGGATCGGTCGGTTGGA 60.284 61.111 0.00 0.00 0.00 3.53
2200 2284 1.914263 TGGGATCGGTCGGTTGGAA 60.914 57.895 0.00 0.00 0.00 3.53
2201 2285 1.268992 TGGGATCGGTCGGTTGGAAT 61.269 55.000 0.00 0.00 0.00 3.01
2202 2286 0.107361 GGGATCGGTCGGTTGGAATT 60.107 55.000 0.00 0.00 0.00 2.17
2203 2287 1.014352 GGATCGGTCGGTTGGAATTG 58.986 55.000 0.00 0.00 0.00 2.32
2204 2288 1.014352 GATCGGTCGGTTGGAATTGG 58.986 55.000 0.00 0.00 0.00 3.16
2205 2289 0.616371 ATCGGTCGGTTGGAATTGGA 59.384 50.000 0.00 0.00 0.00 3.53
2206 2290 0.397187 TCGGTCGGTTGGAATTGGAA 59.603 50.000 0.00 0.00 0.00 3.53
2272 2360 1.528586 GAGGATTGGTTGATGATCGCG 59.471 52.381 0.00 0.00 0.00 5.87
2273 2361 1.138859 AGGATTGGTTGATGATCGCGA 59.861 47.619 13.09 13.09 0.00 5.87
2274 2362 1.528586 GGATTGGTTGATGATCGCGAG 59.471 52.381 16.66 0.00 0.00 5.03
2275 2363 1.528586 GATTGGTTGATGATCGCGAGG 59.471 52.381 16.66 0.00 0.00 4.63
2276 2364 0.534873 TTGGTTGATGATCGCGAGGA 59.465 50.000 16.66 3.16 0.00 3.71
2277 2365 0.752658 TGGTTGATGATCGCGAGGAT 59.247 50.000 16.66 8.81 38.35 3.24
2295 2383 6.686630 CGAGGATTGATTGATTAGCTACTCT 58.313 40.000 11.88 0.00 0.00 3.24
2339 2430 9.760660 GTATATACTGTTGCTTTTTGTCTCTTG 57.239 33.333 5.58 0.00 0.00 3.02
2340 2431 6.699575 ATACTGTTGCTTTTTGTCTCTTGT 57.300 33.333 0.00 0.00 0.00 3.16
2345 2437 3.772932 TGCTTTTTGTCTCTTGTGCTTG 58.227 40.909 0.00 0.00 0.00 4.01
2381 2473 2.094182 TCATGGCGAGTCTGGTAAAGTC 60.094 50.000 0.00 0.00 0.00 3.01
2386 2478 1.732732 CGAGTCTGGTAAAGTCTGCGG 60.733 57.143 0.00 0.00 0.00 5.69
2420 2512 3.815401 CTCCGTTGATCTTTGGTGAAAGT 59.185 43.478 0.00 0.00 39.79 2.66
2422 2514 5.369833 TCCGTTGATCTTTGGTGAAAGTTA 58.630 37.500 0.00 0.00 39.79 2.24
2423 2515 5.237779 TCCGTTGATCTTTGGTGAAAGTTAC 59.762 40.000 0.00 0.00 39.79 2.50
2424 2516 5.449304 CGTTGATCTTTGGTGAAAGTTACC 58.551 41.667 0.00 0.00 39.79 2.85
2425 2517 5.238650 CGTTGATCTTTGGTGAAAGTTACCT 59.761 40.000 0.00 0.00 39.79 3.08
2426 2518 6.425721 CGTTGATCTTTGGTGAAAGTTACCTA 59.574 38.462 0.00 0.00 39.79 3.08
2427 2519 7.570691 CGTTGATCTTTGGTGAAAGTTACCTAC 60.571 40.741 0.00 0.00 39.79 3.18
2428 2520 7.074653 TGATCTTTGGTGAAAGTTACCTACT 57.925 36.000 0.00 0.00 39.79 2.57
2429 2521 7.159372 TGATCTTTGGTGAAAGTTACCTACTC 58.841 38.462 0.00 0.00 39.79 2.59
2430 2522 6.488769 TCTTTGGTGAAAGTTACCTACTCA 57.511 37.500 0.00 0.00 39.79 3.41
2431 2523 6.285990 TCTTTGGTGAAAGTTACCTACTCAC 58.714 40.000 0.00 0.00 39.79 3.51
2432 2524 5.881923 TTGGTGAAAGTTACCTACTCACT 57.118 39.130 3.77 0.00 39.01 3.41
2433 2525 5.881923 TGGTGAAAGTTACCTACTCACTT 57.118 39.130 3.77 0.00 39.01 3.16
2434 2526 5.850614 TGGTGAAAGTTACCTACTCACTTC 58.149 41.667 3.77 0.00 39.01 3.01
2435 2527 5.364446 TGGTGAAAGTTACCTACTCACTTCA 59.636 40.000 3.77 0.00 39.01 3.02
2436 2528 5.695363 GGTGAAAGTTACCTACTCACTTCAC 59.305 44.000 10.36 10.36 44.23 3.18
2437 2529 6.462628 GGTGAAAGTTACCTACTCACTTCACT 60.463 42.308 15.15 0.00 44.31 3.41
2438 2530 6.985059 GTGAAAGTTACCTACTCACTTCACTT 59.015 38.462 11.10 0.00 42.97 3.16
2439 2531 7.169476 GTGAAAGTTACCTACTCACTTCACTTC 59.831 40.741 11.10 0.00 42.97 3.01
2440 2532 5.373981 AGTTACCTACTCACTTCACTTCG 57.626 43.478 0.00 0.00 28.23 3.79
2441 2533 4.826183 AGTTACCTACTCACTTCACTTCGT 59.174 41.667 0.00 0.00 28.23 3.85
2442 2534 5.301298 AGTTACCTACTCACTTCACTTCGTT 59.699 40.000 0.00 0.00 28.23 3.85
2443 2535 4.240175 ACCTACTCACTTCACTTCGTTC 57.760 45.455 0.00 0.00 0.00 3.95
2444 2536 3.005578 ACCTACTCACTTCACTTCGTTCC 59.994 47.826 0.00 0.00 0.00 3.62
2445 2537 3.256136 CCTACTCACTTCACTTCGTTCCT 59.744 47.826 0.00 0.00 0.00 3.36
2446 2538 4.458295 CCTACTCACTTCACTTCGTTCCTA 59.542 45.833 0.00 0.00 0.00 2.94
2447 2539 4.931661 ACTCACTTCACTTCGTTCCTAA 57.068 40.909 0.00 0.00 0.00 2.69
2448 2540 5.272283 ACTCACTTCACTTCGTTCCTAAA 57.728 39.130 0.00 0.00 0.00 1.85
2449 2541 5.855045 ACTCACTTCACTTCGTTCCTAAAT 58.145 37.500 0.00 0.00 0.00 1.40
2450 2542 6.989659 ACTCACTTCACTTCGTTCCTAAATA 58.010 36.000 0.00 0.00 0.00 1.40
2451 2543 7.612677 ACTCACTTCACTTCGTTCCTAAATAT 58.387 34.615 0.00 0.00 0.00 1.28
2452 2544 8.095169 ACTCACTTCACTTCGTTCCTAAATATT 58.905 33.333 0.00 0.00 0.00 1.28
2453 2545 8.842358 TCACTTCACTTCGTTCCTAAATATTT 57.158 30.769 5.89 5.89 0.00 1.40
2454 2546 8.717821 TCACTTCACTTCGTTCCTAAATATTTG 58.282 33.333 11.05 1.40 0.00 2.32
2455 2547 8.504005 CACTTCACTTCGTTCCTAAATATTTGT 58.496 33.333 11.05 0.00 0.00 2.83
2456 2548 8.718734 ACTTCACTTCGTTCCTAAATATTTGTC 58.281 33.333 11.05 0.00 0.00 3.18
2457 2549 8.842358 TTCACTTCGTTCCTAAATATTTGTCT 57.158 30.769 11.05 0.00 0.00 3.41
2458 2550 8.842358 TCACTTCGTTCCTAAATATTTGTCTT 57.158 30.769 11.05 0.00 0.00 3.01
2459 2551 9.280174 TCACTTCGTTCCTAAATATTTGTCTTT 57.720 29.630 11.05 0.00 0.00 2.52
2492 2584 7.709269 TTCAACAAATGACTATATACGGAGC 57.291 36.000 0.00 0.00 37.92 4.70
2493 2585 6.811954 TCAACAAATGACTATATACGGAGCA 58.188 36.000 0.00 0.00 31.50 4.26
2494 2586 7.269316 TCAACAAATGACTATATACGGAGCAA 58.731 34.615 0.00 0.00 31.50 3.91
2495 2587 7.766738 TCAACAAATGACTATATACGGAGCAAA 59.233 33.333 0.00 0.00 31.50 3.68
2496 2588 8.394877 CAACAAATGACTATATACGGAGCAAAA 58.605 33.333 0.00 0.00 0.00 2.44
2497 2589 8.677148 ACAAATGACTATATACGGAGCAAAAT 57.323 30.769 0.00 0.00 0.00 1.82
2498 2590 8.559536 ACAAATGACTATATACGGAGCAAAATG 58.440 33.333 0.00 0.00 0.00 2.32
2499 2591 8.773645 CAAATGACTATATACGGAGCAAAATGA 58.226 33.333 0.00 0.00 0.00 2.57
2500 2592 8.539770 AATGACTATATACGGAGCAAAATGAG 57.460 34.615 0.00 0.00 0.00 2.90
2501 2593 7.050970 TGACTATATACGGAGCAAAATGAGT 57.949 36.000 0.00 0.00 0.00 3.41
2502 2594 6.923508 TGACTATATACGGAGCAAAATGAGTG 59.076 38.462 0.00 0.00 0.00 3.51
2503 2595 7.050970 ACTATATACGGAGCAAAATGAGTGA 57.949 36.000 0.00 0.00 0.00 3.41
2504 2596 7.497595 ACTATATACGGAGCAAAATGAGTGAA 58.502 34.615 0.00 0.00 0.00 3.18
2505 2597 8.150945 ACTATATACGGAGCAAAATGAGTGAAT 58.849 33.333 0.00 0.00 0.00 2.57
2506 2598 5.741388 ATACGGAGCAAAATGAGTGAATC 57.259 39.130 0.00 0.00 0.00 2.52
2507 2599 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2508 2600 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2509 2601 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2510 2602 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2511 2603 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2547 2639 9.607988 TGTTTATATACAGTGGTAGTCCATTTG 57.392 33.333 0.00 0.00 46.20 2.32
2548 2640 9.826574 GTTTATATACAGTGGTAGTCCATTTGA 57.173 33.333 0.00 0.00 46.20 2.69
2552 2644 9.920946 ATATACAGTGGTAGTCCATTTGAAATT 57.079 29.630 0.00 0.00 46.20 1.82
2553 2645 6.976934 ACAGTGGTAGTCCATTTGAAATTT 57.023 33.333 0.00 0.00 46.20 1.82
2554 2646 6.981722 ACAGTGGTAGTCCATTTGAAATTTC 58.018 36.000 11.41 11.41 46.20 2.17
2555 2647 6.777580 ACAGTGGTAGTCCATTTGAAATTTCT 59.222 34.615 18.64 0.00 46.20 2.52
2556 2648 7.942341 ACAGTGGTAGTCCATTTGAAATTTCTA 59.058 33.333 18.64 8.95 46.20 2.10
2557 2649 8.792633 CAGTGGTAGTCCATTTGAAATTTCTAA 58.207 33.333 18.64 17.10 46.20 2.10
2558 2650 9.362151 AGTGGTAGTCCATTTGAAATTTCTAAA 57.638 29.630 18.64 15.99 46.20 1.85
2559 2651 9.974980 GTGGTAGTCCATTTGAAATTTCTAAAA 57.025 29.630 18.64 11.98 46.20 1.52
2582 2674 6.769134 AAACAAATATTTAGGAACGGAGGG 57.231 37.500 0.00 0.00 0.00 4.30
2583 2675 5.703730 ACAAATATTTAGGAACGGAGGGA 57.296 39.130 0.00 0.00 0.00 4.20
2584 2676 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2585 2677 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
2586 2678 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
2587 2679 6.667558 AATATTTAGGAACGGAGGGAGTAG 57.332 41.667 0.00 0.00 0.00 2.57
2588 2680 3.744940 TTTAGGAACGGAGGGAGTAGA 57.255 47.619 0.00 0.00 0.00 2.59
2589 2681 3.744940 TTAGGAACGGAGGGAGTAGAA 57.255 47.619 0.00 0.00 0.00 2.10
2590 2682 1.849977 AGGAACGGAGGGAGTAGAAC 58.150 55.000 0.00 0.00 0.00 3.01
2591 2683 0.455005 GGAACGGAGGGAGTAGAACG 59.545 60.000 0.00 0.00 0.00 3.95
2592 2684 1.457346 GAACGGAGGGAGTAGAACGA 58.543 55.000 0.00 0.00 0.00 3.85
2629 2721 3.859650 CATCGATGCTTTCCATGCC 57.140 52.632 13.37 0.00 33.29 4.40
2636 2732 0.469705 TGCTTTCCATGCCCTGTTGT 60.470 50.000 0.00 0.00 0.00 3.32
2651 2747 1.073025 TTGTCAGGCGCATTGGTCT 59.927 52.632 10.83 0.00 0.00 3.85
2678 3309 3.247648 CGAAGAGTACAAACACACAAGGG 59.752 47.826 0.00 0.00 0.00 3.95
2681 3312 0.317519 GTACAAACACACAAGGGCGC 60.318 55.000 0.00 0.00 0.00 6.53
2694 3325 4.404654 GGCGCCCGCAGAAAAGTG 62.405 66.667 18.11 0.00 44.11 3.16
2696 3327 4.404654 CGCCCGCAGAAAAGTGCC 62.405 66.667 0.00 0.00 40.62 5.01
2697 3328 3.294493 GCCCGCAGAAAAGTGCCA 61.294 61.111 0.00 0.00 40.62 4.92
2698 3329 2.639327 GCCCGCAGAAAAGTGCCAT 61.639 57.895 0.00 0.00 40.62 4.40
2699 3330 1.508088 CCCGCAGAAAAGTGCCATC 59.492 57.895 0.00 0.00 40.62 3.51
2700 3331 0.962356 CCCGCAGAAAAGTGCCATCT 60.962 55.000 0.00 0.00 40.62 2.90
2701 3332 1.678728 CCCGCAGAAAAGTGCCATCTA 60.679 52.381 0.00 0.00 40.62 1.98
2702 3333 1.398390 CCGCAGAAAAGTGCCATCTAC 59.602 52.381 0.00 0.00 40.62 2.59
2703 3334 1.398390 CGCAGAAAAGTGCCATCTACC 59.602 52.381 0.00 0.00 40.62 3.18
2704 3335 2.436417 GCAGAAAAGTGCCATCTACCA 58.564 47.619 0.00 0.00 37.49 3.25
2705 3336 3.019564 GCAGAAAAGTGCCATCTACCAT 58.980 45.455 0.00 0.00 37.49 3.55
2706 3337 4.199310 GCAGAAAAGTGCCATCTACCATA 58.801 43.478 0.00 0.00 37.49 2.74
2707 3338 4.274459 GCAGAAAAGTGCCATCTACCATAG 59.726 45.833 0.00 0.00 37.49 2.23
2708 3339 4.818546 CAGAAAAGTGCCATCTACCATAGG 59.181 45.833 0.00 0.00 0.00 2.57
2709 3340 3.864789 AAAGTGCCATCTACCATAGGG 57.135 47.619 0.00 0.00 41.29 3.53
2710 3341 1.734655 AGTGCCATCTACCATAGGGG 58.265 55.000 0.00 0.00 44.81 4.79
2711 3342 0.036875 GTGCCATCTACCATAGGGGC 59.963 60.000 0.00 10.65 42.87 5.80
2712 3343 1.296715 GCCATCTACCATAGGGGCG 59.703 63.158 0.00 0.00 42.05 6.13
2713 3344 1.983224 CCATCTACCATAGGGGCGG 59.017 63.158 0.00 0.00 42.05 6.13
2714 3345 1.553690 CCATCTACCATAGGGGCGGG 61.554 65.000 0.00 0.00 42.05 6.13
2715 3346 1.918800 ATCTACCATAGGGGCGGGC 60.919 63.158 0.00 0.00 42.05 6.13
2716 3347 2.402557 ATCTACCATAGGGGCGGGCT 62.403 60.000 0.00 0.00 42.05 5.19
2717 3348 1.229082 CTACCATAGGGGCGGGCTA 60.229 63.158 0.00 0.00 42.05 3.93
2718 3349 0.834687 CTACCATAGGGGCGGGCTAA 60.835 60.000 0.00 0.00 42.05 3.09
2719 3350 0.400237 TACCATAGGGGCGGGCTAAA 60.400 55.000 0.00 0.00 42.05 1.85
2720 3351 1.073199 CCATAGGGGCGGGCTAAAG 59.927 63.158 0.26 0.00 0.00 1.85
2721 3352 1.705997 CCATAGGGGCGGGCTAAAGT 61.706 60.000 0.26 0.00 0.00 2.66
2722 3353 1.053424 CATAGGGGCGGGCTAAAGTA 58.947 55.000 0.26 0.00 0.00 2.24
2723 3354 1.054231 ATAGGGGCGGGCTAAAGTAC 58.946 55.000 0.26 0.00 0.00 2.73
2727 3358 1.297364 GGCGGGCTAAAGTACCACA 59.703 57.895 0.00 0.00 0.00 4.17
2738 3369 2.627515 AGTACCACATGCTGCCATAG 57.372 50.000 0.00 0.00 0.00 2.23
2740 3371 2.158900 AGTACCACATGCTGCCATAGAC 60.159 50.000 0.00 0.00 0.00 2.59
2741 3372 0.620030 ACCACATGCTGCCATAGACA 59.380 50.000 0.00 0.00 0.00 3.41
2748 3379 1.298157 GCTGCCATAGACAACGCACA 61.298 55.000 0.00 0.00 0.00 4.57
2749 3380 1.155889 CTGCCATAGACAACGCACAA 58.844 50.000 0.00 0.00 0.00 3.33
2750 3381 0.871722 TGCCATAGACAACGCACAAC 59.128 50.000 0.00 0.00 0.00 3.32
2770 3401 4.811761 GAATCCGCAACGCCACGC 62.812 66.667 0.00 0.00 0.00 5.34
2790 3421 3.482156 CAGTACCAAGCTGCTATCCAT 57.518 47.619 0.90 0.00 0.00 3.41
2793 3424 0.466922 ACCAAGCTGCTATCCATGGC 60.467 55.000 15.41 0.00 34.56 4.40
2801 3432 2.232208 CTGCTATCCATGGCTGACGATA 59.768 50.000 6.96 0.00 35.73 2.92
2818 3449 1.331138 GATACGTCGACACCTGGAGAG 59.669 57.143 17.16 0.00 0.00 3.20
2824 3455 2.295349 GTCGACACCTGGAGAGTTGTTA 59.705 50.000 11.55 0.00 0.00 2.41
2838 3469 6.126911 GGAGAGTTGTTAATTCCATCCTCTCT 60.127 42.308 20.39 11.60 35.38 3.10
2878 3509 2.126057 TCATCTATGGCCATCACACCA 58.874 47.619 24.80 1.72 41.06 4.17
2896 3527 5.691754 CACACCATTCTAAGCAACTTTTTCC 59.308 40.000 0.00 0.00 0.00 3.13
2905 3536 3.081804 AGCAACTTTTTCCCATCCGTAG 58.918 45.455 0.00 0.00 0.00 3.51
2906 3537 2.817844 GCAACTTTTTCCCATCCGTAGT 59.182 45.455 0.00 0.00 0.00 2.73
2907 3538 4.004982 GCAACTTTTTCCCATCCGTAGTA 58.995 43.478 0.00 0.00 0.00 1.82
2908 3539 4.142752 GCAACTTTTTCCCATCCGTAGTAC 60.143 45.833 0.00 0.00 0.00 2.73
2909 3540 5.243207 CAACTTTTTCCCATCCGTAGTACT 58.757 41.667 0.00 0.00 0.00 2.73
2910 3541 5.082251 ACTTTTTCCCATCCGTAGTACTC 57.918 43.478 0.00 0.00 0.00 2.59
2911 3542 4.081254 ACTTTTTCCCATCCGTAGTACTCC 60.081 45.833 0.00 0.00 0.00 3.85
2912 3543 1.683943 TTCCCATCCGTAGTACTCCG 58.316 55.000 0.00 0.00 0.00 4.63
2913 3544 0.548031 TCCCATCCGTAGTACTCCGT 59.452 55.000 7.11 0.00 0.00 4.69
2914 3545 1.768275 TCCCATCCGTAGTACTCCGTA 59.232 52.381 7.11 0.00 0.00 4.02
2922 3553 4.572389 TCCGTAGTACTCCGTATCTTTCAC 59.428 45.833 7.11 0.00 0.00 3.18
2923 3554 4.260948 CCGTAGTACTCCGTATCTTTCACC 60.261 50.000 7.11 0.00 0.00 4.02
2948 3592 6.238610 GCAGATGTATGCCTCTAATTTGAG 57.761 41.667 9.64 9.64 40.43 3.02
2949 3593 5.334724 GCAGATGTATGCCTCTAATTTGAGC 60.335 44.000 10.96 7.62 40.43 4.26
2950 3594 5.996513 CAGATGTATGCCTCTAATTTGAGCT 59.003 40.000 10.96 0.00 33.02 4.09
2951 3595 5.996513 AGATGTATGCCTCTAATTTGAGCTG 59.003 40.000 10.96 0.92 33.02 4.24
2952 3596 5.357742 TGTATGCCTCTAATTTGAGCTGA 57.642 39.130 10.96 0.00 33.02 4.26
2953 3597 5.363101 TGTATGCCTCTAATTTGAGCTGAG 58.637 41.667 10.96 0.00 33.02 3.35
2954 3598 3.988976 TGCCTCTAATTTGAGCTGAGT 57.011 42.857 10.96 0.00 33.02 3.41
2955 3599 3.603532 TGCCTCTAATTTGAGCTGAGTG 58.396 45.455 10.96 0.00 33.02 3.51
2956 3600 2.941720 GCCTCTAATTTGAGCTGAGTGG 59.058 50.000 10.96 0.00 33.02 4.00
2957 3601 2.941720 CCTCTAATTTGAGCTGAGTGGC 59.058 50.000 10.96 0.00 33.02 5.01
2958 3602 2.606725 CTCTAATTTGAGCTGAGTGGCG 59.393 50.000 3.95 0.00 37.29 5.69
2959 3603 1.667724 CTAATTTGAGCTGAGTGGCGG 59.332 52.381 0.00 0.00 37.29 6.13
2960 3604 0.962356 AATTTGAGCTGAGTGGCGGG 60.962 55.000 0.00 0.00 37.29 6.13
2992 3656 1.004079 GAGCTGAGCTGCTTTATTCGC 60.004 52.381 13.71 0.88 44.17 4.70
2993 3657 0.315706 GCTGAGCTGCTTTATTCGCG 60.316 55.000 2.53 0.00 0.00 5.87
2996 3660 2.797156 CTGAGCTGCTTTATTCGCGTAT 59.203 45.455 5.77 4.29 0.00 3.06
2998 3662 1.867233 AGCTGCTTTATTCGCGTATGG 59.133 47.619 5.77 0.00 0.00 2.74
3004 3668 5.270083 TGCTTTATTCGCGTATGGAAAATG 58.730 37.500 5.77 0.00 0.00 2.32
3022 3686 6.484977 GGAAAATGAAGCTTATCCGAGATTCT 59.515 38.462 0.00 0.00 41.40 2.40
3057 3721 2.925170 AAGGCGTGTCCTGCTCCT 60.925 61.111 0.00 0.00 46.94 3.69
3058 3722 2.520536 AAGGCGTGTCCTGCTCCTT 61.521 57.895 0.00 0.00 46.94 3.36
3059 3723 2.738213 AAGGCGTGTCCTGCTCCTTG 62.738 60.000 0.00 0.00 46.94 3.61
3060 3724 2.031163 GCGTGTCCTGCTCCTTGT 59.969 61.111 0.00 0.00 0.00 3.16
3061 3725 1.598130 GCGTGTCCTGCTCCTTGTT 60.598 57.895 0.00 0.00 0.00 2.83
3062 3726 1.845809 GCGTGTCCTGCTCCTTGTTG 61.846 60.000 0.00 0.00 0.00 3.33
3063 3727 1.845809 CGTGTCCTGCTCCTTGTTGC 61.846 60.000 0.00 0.00 0.00 4.17
3064 3728 0.819259 GTGTCCTGCTCCTTGTTGCA 60.819 55.000 0.00 0.00 37.63 4.08
3065 3729 0.111061 TGTCCTGCTCCTTGTTGCAT 59.889 50.000 0.00 0.00 38.59 3.96
3066 3730 1.251251 GTCCTGCTCCTTGTTGCATT 58.749 50.000 0.00 0.00 38.59 3.56
3067 3731 1.615392 GTCCTGCTCCTTGTTGCATTT 59.385 47.619 0.00 0.00 38.59 2.32
3068 3732 1.614903 TCCTGCTCCTTGTTGCATTTG 59.385 47.619 0.00 0.00 38.59 2.32
3069 3733 1.342174 CCTGCTCCTTGTTGCATTTGT 59.658 47.619 0.00 0.00 38.59 2.83
3070 3734 2.400399 CTGCTCCTTGTTGCATTTGTG 58.600 47.619 0.00 0.00 38.59 3.33
3071 3735 1.068895 TGCTCCTTGTTGCATTTGTGG 59.931 47.619 0.00 0.00 33.94 4.17
3072 3736 1.069049 GCTCCTTGTTGCATTTGTGGT 59.931 47.619 0.00 0.00 0.00 4.16
3073 3737 2.483538 GCTCCTTGTTGCATTTGTGGTT 60.484 45.455 0.00 0.00 0.00 3.67
3074 3738 3.795877 CTCCTTGTTGCATTTGTGGTTT 58.204 40.909 0.00 0.00 0.00 3.27
3075 3739 4.739137 GCTCCTTGTTGCATTTGTGGTTTA 60.739 41.667 0.00 0.00 0.00 2.01
3076 3740 4.942852 TCCTTGTTGCATTTGTGGTTTAG 58.057 39.130 0.00 0.00 0.00 1.85
3077 3741 4.404073 TCCTTGTTGCATTTGTGGTTTAGT 59.596 37.500 0.00 0.00 0.00 2.24
3078 3742 5.105146 TCCTTGTTGCATTTGTGGTTTAGTT 60.105 36.000 0.00 0.00 0.00 2.24
3079 3743 5.234116 CCTTGTTGCATTTGTGGTTTAGTTC 59.766 40.000 0.00 0.00 0.00 3.01
3080 3744 5.330455 TGTTGCATTTGTGGTTTAGTTCA 57.670 34.783 0.00 0.00 0.00 3.18
3081 3745 5.347342 TGTTGCATTTGTGGTTTAGTTCAG 58.653 37.500 0.00 0.00 0.00 3.02
3082 3746 3.976169 TGCATTTGTGGTTTAGTTCAGC 58.024 40.909 0.00 0.00 0.00 4.26
3083 3747 2.979813 GCATTTGTGGTTTAGTTCAGCG 59.020 45.455 0.00 0.00 0.00 5.18
3084 3748 3.550030 GCATTTGTGGTTTAGTTCAGCGT 60.550 43.478 0.00 0.00 0.00 5.07
3085 3749 3.684103 TTTGTGGTTTAGTTCAGCGTG 57.316 42.857 0.00 0.00 0.00 5.34
3086 3750 2.605837 TGTGGTTTAGTTCAGCGTGA 57.394 45.000 0.00 0.00 0.00 4.35
3087 3751 3.120321 TGTGGTTTAGTTCAGCGTGAT 57.880 42.857 0.00 0.00 0.00 3.06
3088 3752 3.472652 TGTGGTTTAGTTCAGCGTGATT 58.527 40.909 0.00 0.00 0.00 2.57
3089 3753 4.633175 TGTGGTTTAGTTCAGCGTGATTA 58.367 39.130 0.00 0.00 0.00 1.75
3090 3754 5.057819 TGTGGTTTAGTTCAGCGTGATTAA 58.942 37.500 0.00 0.00 0.00 1.40
3091 3755 5.178623 TGTGGTTTAGTTCAGCGTGATTAAG 59.821 40.000 0.00 0.00 0.00 1.85
3092 3756 4.693566 TGGTTTAGTTCAGCGTGATTAAGG 59.306 41.667 0.00 0.00 0.00 2.69
3093 3757 4.694037 GGTTTAGTTCAGCGTGATTAAGGT 59.306 41.667 0.00 0.00 0.00 3.50
3094 3758 5.870978 GGTTTAGTTCAGCGTGATTAAGGTA 59.129 40.000 0.00 0.00 0.00 3.08
3095 3759 6.369615 GGTTTAGTTCAGCGTGATTAAGGTAA 59.630 38.462 0.00 0.00 0.00 2.85
3096 3760 7.065443 GGTTTAGTTCAGCGTGATTAAGGTAAT 59.935 37.037 0.00 0.00 0.00 1.89
3097 3761 9.090692 GTTTAGTTCAGCGTGATTAAGGTAATA 57.909 33.333 0.00 0.00 0.00 0.98
3098 3762 8.638685 TTAGTTCAGCGTGATTAAGGTAATAC 57.361 34.615 0.00 0.00 0.00 1.89
3099 3763 6.875076 AGTTCAGCGTGATTAAGGTAATACT 58.125 36.000 0.00 0.00 0.00 2.12
3100 3764 6.979238 AGTTCAGCGTGATTAAGGTAATACTC 59.021 38.462 0.00 0.00 0.00 2.59
3101 3765 5.839621 TCAGCGTGATTAAGGTAATACTCC 58.160 41.667 0.00 0.00 0.00 3.85
3102 3766 4.989168 CAGCGTGATTAAGGTAATACTCCC 59.011 45.833 0.00 0.00 0.00 4.30
3103 3767 4.900054 AGCGTGATTAAGGTAATACTCCCT 59.100 41.667 0.00 0.00 0.00 4.20
3104 3768 5.010820 AGCGTGATTAAGGTAATACTCCCTC 59.989 44.000 0.00 0.00 0.00 4.30
3105 3769 5.780984 CGTGATTAAGGTAATACTCCCTCC 58.219 45.833 0.00 0.00 0.00 4.30
3106 3770 5.539193 CGTGATTAAGGTAATACTCCCTCCT 59.461 44.000 0.00 0.00 0.00 3.69
3107 3771 6.294620 CGTGATTAAGGTAATACTCCCTCCTC 60.295 46.154 0.00 0.00 0.00 3.71
3108 3772 6.014413 GTGATTAAGGTAATACTCCCTCCTCC 60.014 46.154 0.00 0.00 0.00 4.30
3109 3773 2.679429 AGGTAATACTCCCTCCTCCG 57.321 55.000 0.00 0.00 0.00 4.63
3110 3774 1.858246 AGGTAATACTCCCTCCTCCGT 59.142 52.381 0.00 0.00 0.00 4.69
3111 3775 1.962100 GGTAATACTCCCTCCTCCGTG 59.038 57.143 0.00 0.00 0.00 4.94
3112 3776 2.423947 GGTAATACTCCCTCCTCCGTGA 60.424 54.545 0.00 0.00 0.00 4.35
3113 3777 2.544844 AATACTCCCTCCTCCGTGAA 57.455 50.000 0.00 0.00 0.00 3.18
3114 3778 2.074729 ATACTCCCTCCTCCGTGAAG 57.925 55.000 0.00 0.00 0.00 3.02
3115 3779 0.997363 TACTCCCTCCTCCGTGAAGA 59.003 55.000 0.00 0.00 0.00 2.87
3116 3780 0.114560 ACTCCCTCCTCCGTGAAGAA 59.885 55.000 0.00 0.00 0.00 2.52
3117 3781 1.267121 CTCCCTCCTCCGTGAAGAAA 58.733 55.000 0.00 0.00 0.00 2.52
3118 3782 1.834263 CTCCCTCCTCCGTGAAGAAAT 59.166 52.381 0.00 0.00 0.00 2.17
3119 3783 3.031736 CTCCCTCCTCCGTGAAGAAATA 58.968 50.000 0.00 0.00 0.00 1.40
3120 3784 3.643792 CTCCCTCCTCCGTGAAGAAATAT 59.356 47.826 0.00 0.00 0.00 1.28
3121 3785 4.811498 TCCCTCCTCCGTGAAGAAATATA 58.189 43.478 0.00 0.00 0.00 0.86
3122 3786 5.213519 TCCCTCCTCCGTGAAGAAATATAA 58.786 41.667 0.00 0.00 0.00 0.98
3123 3787 5.304614 TCCCTCCTCCGTGAAGAAATATAAG 59.695 44.000 0.00 0.00 0.00 1.73
3124 3788 5.304614 CCCTCCTCCGTGAAGAAATATAAGA 59.695 44.000 0.00 0.00 0.00 2.10
3125 3789 6.451393 CCTCCTCCGTGAAGAAATATAAGAG 58.549 44.000 0.00 0.00 0.00 2.85
3126 3790 6.406692 TCCTCCGTGAAGAAATATAAGAGG 57.593 41.667 0.00 0.00 39.79 3.69
3127 3791 5.304614 TCCTCCGTGAAGAAATATAAGAGGG 59.695 44.000 0.00 0.00 39.09 4.30
3128 3792 5.070580 CCTCCGTGAAGAAATATAAGAGGGT 59.929 44.000 0.00 0.00 35.73 4.34
3129 3793 6.158023 TCCGTGAAGAAATATAAGAGGGTC 57.842 41.667 0.00 0.00 0.00 4.46
3130 3794 5.897824 TCCGTGAAGAAATATAAGAGGGTCT 59.102 40.000 0.00 0.00 0.00 3.85
3131 3795 7.064866 TCCGTGAAGAAATATAAGAGGGTCTA 58.935 38.462 0.00 0.00 0.00 2.59
3132 3796 7.562454 TCCGTGAAGAAATATAAGAGGGTCTAA 59.438 37.037 0.00 0.00 0.00 2.10
3133 3797 8.202137 CCGTGAAGAAATATAAGAGGGTCTAAA 58.798 37.037 0.00 0.00 0.00 1.85
3134 3798 9.765795 CGTGAAGAAATATAAGAGGGTCTAAAT 57.234 33.333 0.00 0.00 0.00 1.40
3145 3809 7.693969 AAGAGGGTCTAAATCATTCTTTGTG 57.306 36.000 0.00 0.00 0.00 3.33
3146 3810 6.183347 AGAGGGTCTAAATCATTCTTTGTGG 58.817 40.000 0.00 0.00 0.00 4.17
3147 3811 5.892348 AGGGTCTAAATCATTCTTTGTGGT 58.108 37.500 0.00 0.00 0.00 4.16
3148 3812 6.314917 AGGGTCTAAATCATTCTTTGTGGTT 58.685 36.000 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.630098 ACAACATCAGTGCAAATAAATTAAGAG 57.370 29.630 0.00 0.00 0.00 2.85
46 47 7.522901 TTGAAATTCAAACACAACATCAGTG 57.477 32.000 5.87 0.00 35.89 3.66
94 95 5.952064 GCACACAATTCGAATACGTAAGAAG 59.048 40.000 11.83 2.79 43.62 2.85
101 102 3.447752 TGTGCACACAATTCGAATACG 57.552 42.857 17.42 8.45 38.56 3.06
108 109 5.910637 AAACAATCATGTGCACACAATTC 57.089 34.783 24.37 0.00 45.41 2.17
117 118 9.549509 TTATTAAGAACGTAAACAATCATGTGC 57.450 29.630 0.00 0.00 40.46 4.57
152 153 9.691362 GTATTAATTGAGAACTTTTCTTTGGCA 57.309 29.630 0.00 0.00 40.87 4.92
153 154 9.140286 GGTATTAATTGAGAACTTTTCTTTGGC 57.860 33.333 0.00 0.00 40.87 4.52
188 189 5.723672 ATCGATAGGTAATTCCACACGAT 57.276 39.130 0.00 0.00 39.57 3.73
189 190 6.617879 CATATCGATAGGTAATTCCACACGA 58.382 40.000 11.41 0.00 38.98 4.35
193 194 7.268586 AGATGCATATCGATAGGTAATTCCAC 58.731 38.462 17.55 0.34 38.38 4.02
195 196 8.085296 CCTAGATGCATATCGATAGGTAATTCC 58.915 40.741 17.55 5.77 38.38 3.01
205 206 4.214310 CTCCCTCCTAGATGCATATCGAT 58.786 47.826 0.00 2.16 38.38 3.59
209 210 5.660417 CACATACTCCCTCCTAGATGCATAT 59.340 44.000 0.00 0.00 0.00 1.78
230 233 3.752222 ACGGTTTCAAACTTACACACACA 59.248 39.130 0.00 0.00 0.00 3.72
231 234 4.092816 CACGGTTTCAAACTTACACACAC 58.907 43.478 0.00 0.00 0.00 3.82
232 235 3.752222 ACACGGTTTCAAACTTACACACA 59.248 39.130 0.00 0.00 0.00 3.72
242 245 2.356382 CCACAGCTAACACGGTTTCAAA 59.644 45.455 0.00 0.00 0.00 2.69
249 252 1.079127 CCTCCCACAGCTAACACGG 60.079 63.158 0.00 0.00 0.00 4.94
256 259 1.067295 TGTCAAATCCTCCCACAGCT 58.933 50.000 0.00 0.00 0.00 4.24
257 260 1.909700 TTGTCAAATCCTCCCACAGC 58.090 50.000 0.00 0.00 0.00 4.40
258 261 3.221771 TGTTTGTCAAATCCTCCCACAG 58.778 45.455 0.40 0.00 0.00 3.66
259 262 3.304911 TGTTTGTCAAATCCTCCCACA 57.695 42.857 0.40 0.00 0.00 4.17
260 263 4.664150 TTTGTTTGTCAAATCCTCCCAC 57.336 40.909 0.40 0.00 40.56 4.61
261 264 5.683876 TTTTTGTTTGTCAAATCCTCCCA 57.316 34.783 0.40 0.00 44.15 4.37
445 454 3.876589 TTTCCTGCGGGTCGTGCTC 62.877 63.158 12.43 0.00 0.00 4.26
446 455 3.254024 ATTTCCTGCGGGTCGTGCT 62.254 57.895 12.43 0.00 0.00 4.40
508 518 1.630369 AGCTTGATTGAGGGCTACACA 59.370 47.619 0.00 0.00 32.94 3.72
512 522 0.179073 GCGAGCTTGATTGAGGGCTA 60.179 55.000 4.70 0.00 35.01 3.93
552 572 2.119671 GTGGAACCGAACAAAGCAAG 57.880 50.000 0.00 0.00 0.00 4.01
572 592 4.839706 CAATCCCCTTGGGGCGGG 62.840 72.222 19.73 7.33 44.51 6.13
579 599 0.936691 AATCCCCTCCAATCCCCTTG 59.063 55.000 0.00 0.00 34.42 3.61
581 601 0.936691 CAAATCCCCTCCAATCCCCT 59.063 55.000 0.00 0.00 0.00 4.79
582 602 0.105504 CCAAATCCCCTCCAATCCCC 60.106 60.000 0.00 0.00 0.00 4.81
583 603 0.105504 CCCAAATCCCCTCCAATCCC 60.106 60.000 0.00 0.00 0.00 3.85
584 604 0.105504 CCCCAAATCCCCTCCAATCC 60.106 60.000 0.00 0.00 0.00 3.01
585 605 0.105504 CCCCCAAATCCCCTCCAATC 60.106 60.000 0.00 0.00 0.00 2.67
586 606 2.026945 CCCCCAAATCCCCTCCAAT 58.973 57.895 0.00 0.00 0.00 3.16
587 607 3.531961 CCCCCAAATCCCCTCCAA 58.468 61.111 0.00 0.00 0.00 3.53
601 621 3.031013 CCCATACAAGTCAAATTCCCCC 58.969 50.000 0.00 0.00 0.00 5.40
602 622 3.976015 TCCCATACAAGTCAAATTCCCC 58.024 45.455 0.00 0.00 0.00 4.81
603 623 6.544928 AAATCCCATACAAGTCAAATTCCC 57.455 37.500 0.00 0.00 0.00 3.97
604 624 9.750125 GATTAAATCCCATACAAGTCAAATTCC 57.250 33.333 0.00 0.00 0.00 3.01
605 625 9.750125 GGATTAAATCCCATACAAGTCAAATTC 57.250 33.333 0.00 0.00 43.88 2.17
622 642 4.098501 CAGAGGTTTGGCAGGGATTAAATC 59.901 45.833 0.00 0.00 0.00 2.17
623 643 4.026052 CAGAGGTTTGGCAGGGATTAAAT 58.974 43.478 0.00 0.00 0.00 1.40
624 644 3.430453 CAGAGGTTTGGCAGGGATTAAA 58.570 45.455 0.00 0.00 0.00 1.52
625 645 2.883888 GCAGAGGTTTGGCAGGGATTAA 60.884 50.000 0.00 0.00 0.00 1.40
626 646 1.340991 GCAGAGGTTTGGCAGGGATTA 60.341 52.381 0.00 0.00 0.00 1.75
627 647 0.613012 GCAGAGGTTTGGCAGGGATT 60.613 55.000 0.00 0.00 0.00 3.01
628 648 1.000396 GCAGAGGTTTGGCAGGGAT 60.000 57.895 0.00 0.00 0.00 3.85
629 649 2.436109 GCAGAGGTTTGGCAGGGA 59.564 61.111 0.00 0.00 0.00 4.20
630 650 2.677875 GGCAGAGGTTTGGCAGGG 60.678 66.667 0.00 0.00 42.68 4.45
634 654 1.367471 GGTTTGGCAGAGGTTTGGC 59.633 57.895 0.00 0.00 43.38 4.52
635 655 1.471829 GGGGTTTGGCAGAGGTTTGG 61.472 60.000 0.00 0.00 0.00 3.28
636 656 0.469892 AGGGGTTTGGCAGAGGTTTG 60.470 55.000 0.00 0.00 0.00 2.93
637 657 0.264657 AAGGGGTTTGGCAGAGGTTT 59.735 50.000 0.00 0.00 0.00 3.27
638 658 0.178961 GAAGGGGTTTGGCAGAGGTT 60.179 55.000 0.00 0.00 0.00 3.50
639 659 1.360393 TGAAGGGGTTTGGCAGAGGT 61.360 55.000 0.00 0.00 0.00 3.85
640 660 0.178964 TTGAAGGGGTTTGGCAGAGG 60.179 55.000 0.00 0.00 0.00 3.69
641 661 1.703411 TTTGAAGGGGTTTGGCAGAG 58.297 50.000 0.00 0.00 0.00 3.35
642 662 2.247358 GATTTGAAGGGGTTTGGCAGA 58.753 47.619 0.00 0.00 0.00 4.26
643 663 1.276138 GGATTTGAAGGGGTTTGGCAG 59.724 52.381 0.00 0.00 0.00 4.85
644 664 1.347062 GGATTTGAAGGGGTTTGGCA 58.653 50.000 0.00 0.00 0.00 4.92
645 665 0.613260 GGGATTTGAAGGGGTTTGGC 59.387 55.000 0.00 0.00 0.00 4.52
646 666 1.901833 CAGGGATTTGAAGGGGTTTGG 59.098 52.381 0.00 0.00 0.00 3.28
647 667 2.299867 CACAGGGATTTGAAGGGGTTTG 59.700 50.000 0.00 0.00 0.00 2.93
648 668 2.178984 TCACAGGGATTTGAAGGGGTTT 59.821 45.455 0.00 0.00 0.00 3.27
649 669 1.786441 TCACAGGGATTTGAAGGGGTT 59.214 47.619 0.00 0.00 0.00 4.11
650 670 1.455822 TCACAGGGATTTGAAGGGGT 58.544 50.000 0.00 0.00 0.00 4.95
651 671 2.171003 GTTCACAGGGATTTGAAGGGG 58.829 52.381 0.00 0.00 32.40 4.79
652 672 2.171003 GGTTCACAGGGATTTGAAGGG 58.829 52.381 0.00 0.00 32.40 3.95
653 673 1.812571 CGGTTCACAGGGATTTGAAGG 59.187 52.381 0.00 0.00 32.40 3.46
654 674 2.778299 TCGGTTCACAGGGATTTGAAG 58.222 47.619 0.00 0.00 32.40 3.02
655 675 2.882137 GTTCGGTTCACAGGGATTTGAA 59.118 45.455 0.00 0.00 0.00 2.69
656 676 2.158740 TGTTCGGTTCACAGGGATTTGA 60.159 45.455 0.00 0.00 0.00 2.69
657 677 2.031157 GTGTTCGGTTCACAGGGATTTG 60.031 50.000 0.00 0.00 36.05 2.32
658 678 2.227194 GTGTTCGGTTCACAGGGATTT 58.773 47.619 0.00 0.00 36.05 2.17
659 679 1.142060 TGTGTTCGGTTCACAGGGATT 59.858 47.619 4.66 0.00 40.26 3.01
660 680 0.762418 TGTGTTCGGTTCACAGGGAT 59.238 50.000 4.66 0.00 40.26 3.85
661 681 2.213280 TGTGTTCGGTTCACAGGGA 58.787 52.632 4.66 0.00 40.26 4.20
662 682 4.868026 TGTGTTCGGTTCACAGGG 57.132 55.556 4.66 0.00 40.26 4.45
665 685 1.092921 GTGGCTGTGTTCGGTTCACA 61.093 55.000 7.67 7.67 42.41 3.58
666 686 1.647084 GTGGCTGTGTTCGGTTCAC 59.353 57.895 0.00 0.00 36.48 3.18
667 687 1.525077 GGTGGCTGTGTTCGGTTCA 60.525 57.895 0.00 0.00 0.00 3.18
668 688 1.525077 TGGTGGCTGTGTTCGGTTC 60.525 57.895 0.00 0.00 0.00 3.62
673 693 0.886490 CAGGAGTGGTGGCTGTGTTC 60.886 60.000 0.00 0.00 0.00 3.18
674 694 1.149174 CAGGAGTGGTGGCTGTGTT 59.851 57.895 0.00 0.00 0.00 3.32
676 696 1.302033 GTCAGGAGTGGTGGCTGTG 60.302 63.158 0.00 0.00 0.00 3.66
679 699 0.773644 AAATGTCAGGAGTGGTGGCT 59.226 50.000 0.00 0.00 0.00 4.75
694 714 5.753721 TTACAATTGGGAAAGGGGAAATG 57.246 39.130 10.83 0.00 0.00 2.32
708 728 2.801063 CTCGCTGCCCAATTACAATTG 58.199 47.619 3.24 3.24 44.12 2.32
709 729 1.134946 GCTCGCTGCCCAATTACAATT 59.865 47.619 0.00 0.00 35.15 2.32
710 730 0.740737 GCTCGCTGCCCAATTACAAT 59.259 50.000 0.00 0.00 35.15 2.71
711 731 0.607762 TGCTCGCTGCCCAATTACAA 60.608 50.000 0.00 0.00 42.00 2.41
712 732 0.394216 ATGCTCGCTGCCCAATTACA 60.394 50.000 0.00 0.00 42.00 2.41
713 733 0.308993 GATGCTCGCTGCCCAATTAC 59.691 55.000 0.00 0.00 42.00 1.89
714 734 0.819259 GGATGCTCGCTGCCCAATTA 60.819 55.000 0.00 0.00 42.00 1.40
715 735 2.123428 GGATGCTCGCTGCCCAATT 61.123 57.895 0.00 0.00 42.00 2.32
716 736 2.517875 GGATGCTCGCTGCCCAAT 60.518 61.111 0.00 0.00 42.00 3.16
717 737 3.982316 CTGGATGCTCGCTGCCCAA 62.982 63.158 0.00 0.00 42.00 4.12
718 738 4.478371 CTGGATGCTCGCTGCCCA 62.478 66.667 0.00 0.00 42.00 5.36
745 765 0.591236 CCGACGTTGGTTTTGCACAG 60.591 55.000 14.24 0.00 0.00 3.66
747 767 0.316689 CTCCGACGTTGGTTTTGCAC 60.317 55.000 21.46 0.00 0.00 4.57
749 769 0.658897 TTCTCCGACGTTGGTTTTGC 59.341 50.000 21.46 0.00 0.00 3.68
761 781 1.257743 CTGACCTGACCTTTCTCCGA 58.742 55.000 0.00 0.00 0.00 4.55
776 812 2.052690 TAGGAGCGTGAGGGCTGAC 61.053 63.158 0.00 0.00 44.93 3.51
781 817 1.677637 GGGAAGTAGGAGCGTGAGGG 61.678 65.000 0.00 0.00 0.00 4.30
803 839 2.038426 GAGTGGATTTGGTTTTTGGGGG 59.962 50.000 0.00 0.00 0.00 5.40
804 840 2.038426 GGAGTGGATTTGGTTTTTGGGG 59.962 50.000 0.00 0.00 0.00 4.96
805 841 2.038426 GGGAGTGGATTTGGTTTTTGGG 59.962 50.000 0.00 0.00 0.00 4.12
808 844 2.673258 ACGGGAGTGGATTTGGTTTTT 58.327 42.857 0.00 0.00 44.82 1.94
834 886 1.740025 GGGATTGCGAGGTTTGAGAAG 59.260 52.381 0.00 0.00 0.00 2.85
896 948 2.923655 TCGATGACGAAGCTGAATGAAC 59.076 45.455 0.00 0.00 45.74 3.18
897 949 3.230743 TCGATGACGAAGCTGAATGAA 57.769 42.857 0.00 0.00 45.74 2.57
913 965 1.916181 AGAAGTGGGATTTGGGTCGAT 59.084 47.619 0.00 0.00 0.00 3.59
914 966 1.358152 AGAAGTGGGATTTGGGTCGA 58.642 50.000 0.00 0.00 0.00 4.20
916 968 4.588951 AGAAAAAGAAGTGGGATTTGGGTC 59.411 41.667 0.00 0.00 0.00 4.46
942 998 1.686800 CAGGGATTTGGCAAGGGGG 60.687 63.158 0.00 0.00 0.00 5.40
945 1001 1.180029 CTGACAGGGATTTGGCAAGG 58.820 55.000 0.00 0.00 35.21 3.61
948 1004 1.002069 ATCCTGACAGGGATTTGGCA 58.998 50.000 21.56 0.00 42.89 4.92
949 1005 2.173569 ACTATCCTGACAGGGATTTGGC 59.826 50.000 21.56 0.00 42.89 4.52
950 1006 4.510167 AACTATCCTGACAGGGATTTGG 57.490 45.455 21.56 8.67 42.89 3.28
951 1007 5.050490 CGTAACTATCCTGACAGGGATTTG 58.950 45.833 21.56 10.04 42.89 2.32
952 1008 4.101119 CCGTAACTATCCTGACAGGGATTT 59.899 45.833 21.56 12.13 42.89 2.17
953 1009 3.641906 CCGTAACTATCCTGACAGGGATT 59.358 47.826 21.56 12.40 42.89 3.01
954 1010 3.231818 CCGTAACTATCCTGACAGGGAT 58.768 50.000 21.56 14.92 46.60 3.85
955 1011 2.662866 CCGTAACTATCCTGACAGGGA 58.337 52.381 21.56 9.06 39.95 4.20
956 1012 1.687123 CCCGTAACTATCCTGACAGGG 59.313 57.143 21.56 8.13 35.59 4.45
957 1013 1.068741 GCCCGTAACTATCCTGACAGG 59.931 57.143 15.99 15.99 36.46 4.00
958 1014 1.269102 CGCCCGTAACTATCCTGACAG 60.269 57.143 0.00 0.00 0.00 3.51
959 1015 0.742505 CGCCCGTAACTATCCTGACA 59.257 55.000 0.00 0.00 0.00 3.58
1050 1134 2.043450 AGGAGCAGGACGAGGAGG 60.043 66.667 0.00 0.00 0.00 4.30
1082 1166 0.179051 GAGGAAGATGAGCAGCAGGG 60.179 60.000 0.00 0.00 0.00 4.45
1362 1446 4.360405 TTCCTGCCCCCGCCTTTC 62.360 66.667 0.00 0.00 0.00 2.62
1363 1447 4.366684 CTTCCTGCCCCCGCCTTT 62.367 66.667 0.00 0.00 0.00 3.11
1371 1455 1.077858 CTGCTTCTCCTTCCTGCCC 60.078 63.158 0.00 0.00 0.00 5.36
2144 2228 1.080025 AAAGCGTCCGTGTCCTAGC 60.080 57.895 0.00 0.00 0.00 3.42
2145 2229 0.736325 CCAAAGCGTCCGTGTCCTAG 60.736 60.000 0.00 0.00 0.00 3.02
2160 2244 0.898320 CCACCAACACCAACACCAAA 59.102 50.000 0.00 0.00 0.00 3.28
2161 2245 0.972983 CCCACCAACACCAACACCAA 60.973 55.000 0.00 0.00 0.00 3.67
2162 2246 1.380515 CCCACCAACACCAACACCA 60.381 57.895 0.00 0.00 0.00 4.17
2163 2247 2.131067 CCCCACCAACACCAACACC 61.131 63.158 0.00 0.00 0.00 4.16
2164 2248 1.380650 ACCCCACCAACACCAACAC 60.381 57.895 0.00 0.00 0.00 3.32
2165 2249 1.380515 CACCCCACCAACACCAACA 60.381 57.895 0.00 0.00 0.00 3.33
2166 2250 2.131067 CCACCCCACCAACACCAAC 61.131 63.158 0.00 0.00 0.00 3.77
2188 2272 1.459450 ATTCCAATTCCAACCGACCG 58.541 50.000 0.00 0.00 0.00 4.79
2195 2279 6.629963 CGATCCAATTCCAATTCCAATTCCAA 60.630 38.462 0.00 0.00 0.00 3.53
2196 2280 5.163426 CGATCCAATTCCAATTCCAATTCCA 60.163 40.000 0.00 0.00 0.00 3.53
2197 2281 5.163416 ACGATCCAATTCCAATTCCAATTCC 60.163 40.000 0.00 0.00 0.00 3.01
2198 2282 5.906073 ACGATCCAATTCCAATTCCAATTC 58.094 37.500 0.00 0.00 0.00 2.17
2199 2283 5.450412 CGACGATCCAATTCCAATTCCAATT 60.450 40.000 0.00 0.00 0.00 2.32
2200 2284 4.036734 CGACGATCCAATTCCAATTCCAAT 59.963 41.667 0.00 0.00 0.00 3.16
2201 2285 3.376859 CGACGATCCAATTCCAATTCCAA 59.623 43.478 0.00 0.00 0.00 3.53
2202 2286 2.942376 CGACGATCCAATTCCAATTCCA 59.058 45.455 0.00 0.00 0.00 3.53
2203 2287 2.943033 ACGACGATCCAATTCCAATTCC 59.057 45.455 0.00 0.00 0.00 3.01
2204 2288 3.788797 GCACGACGATCCAATTCCAATTC 60.789 47.826 0.00 0.00 0.00 2.17
2205 2289 2.097466 GCACGACGATCCAATTCCAATT 59.903 45.455 0.00 0.00 0.00 2.32
2206 2290 1.670811 GCACGACGATCCAATTCCAAT 59.329 47.619 0.00 0.00 0.00 3.16
2272 2360 7.665690 TCAGAGTAGCTAATCAATCAATCCTC 58.334 38.462 22.16 7.58 0.00 3.71
2273 2361 7.609097 TCAGAGTAGCTAATCAATCAATCCT 57.391 36.000 22.16 0.00 0.00 3.24
2274 2362 8.845413 AATCAGAGTAGCTAATCAATCAATCC 57.155 34.615 22.16 0.00 0.00 3.01
2315 2403 8.292448 CACAAGAGACAAAAAGCAACAGTATAT 58.708 33.333 0.00 0.00 0.00 0.86
2316 2404 7.639039 CACAAGAGACAAAAAGCAACAGTATA 58.361 34.615 0.00 0.00 0.00 1.47
2334 2425 5.404946 CCAACAATAATCCAAGCACAAGAG 58.595 41.667 0.00 0.00 0.00 2.85
2336 2427 4.021192 ACCCAACAATAATCCAAGCACAAG 60.021 41.667 0.00 0.00 0.00 3.16
2337 2428 3.900601 ACCCAACAATAATCCAAGCACAA 59.099 39.130 0.00 0.00 0.00 3.33
2339 2430 4.021544 TGAACCCAACAATAATCCAAGCAC 60.022 41.667 0.00 0.00 0.00 4.40
2340 2431 4.155709 TGAACCCAACAATAATCCAAGCA 58.844 39.130 0.00 0.00 0.00 3.91
2345 2437 3.490761 CGCCATGAACCCAACAATAATCC 60.491 47.826 0.00 0.00 0.00 3.01
2381 2473 0.529992 GAGTTTCCGTATCCCCGCAG 60.530 60.000 0.00 0.00 0.00 5.18
2420 2512 5.278660 GGAACGAAGTGAAGTGAGTAGGTAA 60.279 44.000 0.00 0.00 45.00 2.85
2422 2514 3.005578 GGAACGAAGTGAAGTGAGTAGGT 59.994 47.826 0.00 0.00 45.00 3.08
2423 2515 3.256136 AGGAACGAAGTGAAGTGAGTAGG 59.744 47.826 0.00 0.00 45.00 3.18
2424 2516 4.506886 AGGAACGAAGTGAAGTGAGTAG 57.493 45.455 0.00 0.00 45.00 2.57
2425 2517 6.395426 TTTAGGAACGAAGTGAAGTGAGTA 57.605 37.500 0.00 0.00 45.00 2.59
2426 2518 4.931661 TTAGGAACGAAGTGAAGTGAGT 57.068 40.909 0.00 0.00 45.00 3.41
2427 2519 8.480643 AATATTTAGGAACGAAGTGAAGTGAG 57.519 34.615 0.00 0.00 45.00 3.51
2428 2520 8.717821 CAAATATTTAGGAACGAAGTGAAGTGA 58.282 33.333 0.00 0.00 45.00 3.41
2429 2521 8.504005 ACAAATATTTAGGAACGAAGTGAAGTG 58.496 33.333 0.00 0.00 45.00 3.16
2430 2522 8.617290 ACAAATATTTAGGAACGAAGTGAAGT 57.383 30.769 0.00 0.00 45.00 3.01
2431 2523 8.936864 AGACAAATATTTAGGAACGAAGTGAAG 58.063 33.333 0.00 0.00 45.00 3.02
2432 2524 8.842358 AGACAAATATTTAGGAACGAAGTGAA 57.158 30.769 0.00 0.00 45.00 3.18
2433 2525 8.842358 AAGACAAATATTTAGGAACGAAGTGA 57.158 30.769 0.00 0.00 45.00 3.41
2466 2558 8.774586 GCTCCGTATATAGTCATTTGTTGAAAT 58.225 33.333 0.00 0.00 35.70 2.17
2467 2559 7.766738 TGCTCCGTATATAGTCATTTGTTGAAA 59.233 33.333 0.00 0.00 35.70 2.69
2468 2560 7.269316 TGCTCCGTATATAGTCATTTGTTGAA 58.731 34.615 0.00 0.00 35.70 2.69
2469 2561 6.811954 TGCTCCGTATATAGTCATTTGTTGA 58.188 36.000 0.00 0.00 0.00 3.18
2470 2562 7.477144 TTGCTCCGTATATAGTCATTTGTTG 57.523 36.000 0.00 0.00 0.00 3.33
2471 2563 8.500753 TTTTGCTCCGTATATAGTCATTTGTT 57.499 30.769 0.00 0.00 0.00 2.83
2472 2564 8.559536 CATTTTGCTCCGTATATAGTCATTTGT 58.440 33.333 0.00 0.00 0.00 2.83
2473 2565 8.773645 TCATTTTGCTCCGTATATAGTCATTTG 58.226 33.333 0.00 0.00 0.00 2.32
2474 2566 8.902540 TCATTTTGCTCCGTATATAGTCATTT 57.097 30.769 0.00 0.00 0.00 2.32
2475 2567 8.150945 ACTCATTTTGCTCCGTATATAGTCATT 58.849 33.333 0.00 0.00 0.00 2.57
2476 2568 7.600375 CACTCATTTTGCTCCGTATATAGTCAT 59.400 37.037 0.00 0.00 0.00 3.06
2477 2569 6.923508 CACTCATTTTGCTCCGTATATAGTCA 59.076 38.462 0.00 0.00 0.00 3.41
2478 2570 7.145985 TCACTCATTTTGCTCCGTATATAGTC 58.854 38.462 0.00 0.00 0.00 2.59
2479 2571 7.050970 TCACTCATTTTGCTCCGTATATAGT 57.949 36.000 0.00 0.00 0.00 2.12
2480 2572 7.946655 TTCACTCATTTTGCTCCGTATATAG 57.053 36.000 0.00 0.00 0.00 1.31
2481 2573 8.367911 AGATTCACTCATTTTGCTCCGTATATA 58.632 33.333 0.00 0.00 0.00 0.86
2482 2574 7.220030 AGATTCACTCATTTTGCTCCGTATAT 58.780 34.615 0.00 0.00 0.00 0.86
2483 2575 6.582636 AGATTCACTCATTTTGCTCCGTATA 58.417 36.000 0.00 0.00 0.00 1.47
2484 2576 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2485 2577 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2486 2578 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2487 2579 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2488 2580 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2489 2581 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2490 2582 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
2491 2583 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
2557 2649 7.452189 TCCCTCCGTTCCTAAATATTTGTTTTT 59.548 33.333 11.05 0.00 0.00 1.94
2558 2650 6.949463 TCCCTCCGTTCCTAAATATTTGTTTT 59.051 34.615 11.05 0.00 0.00 2.43
2559 2651 6.486941 TCCCTCCGTTCCTAAATATTTGTTT 58.513 36.000 11.05 0.00 0.00 2.83
2560 2652 6.069705 TCCCTCCGTTCCTAAATATTTGTT 57.930 37.500 11.05 0.00 0.00 2.83
2561 2653 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2562 2654 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2563 2655 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2564 2656 6.379579 TCTACTCCCTCCGTTCCTAAATATT 58.620 40.000 0.00 0.00 0.00 1.28
2565 2657 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
2566 2658 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
2567 2659 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
2568 2660 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
2569 2661 3.359950 GTTCTACTCCCTCCGTTCCTAA 58.640 50.000 0.00 0.00 0.00 2.69
2570 2662 2.681976 CGTTCTACTCCCTCCGTTCCTA 60.682 54.545 0.00 0.00 0.00 2.94
2571 2663 1.849977 GTTCTACTCCCTCCGTTCCT 58.150 55.000 0.00 0.00 0.00 3.36
2572 2664 0.455005 CGTTCTACTCCCTCCGTTCC 59.545 60.000 0.00 0.00 0.00 3.62
2573 2665 1.457346 TCGTTCTACTCCCTCCGTTC 58.543 55.000 0.00 0.00 0.00 3.95
2574 2666 1.915141 TTCGTTCTACTCCCTCCGTT 58.085 50.000 0.00 0.00 0.00 4.44
2575 2667 1.817447 CTTTCGTTCTACTCCCTCCGT 59.183 52.381 0.00 0.00 0.00 4.69
2576 2668 1.817447 ACTTTCGTTCTACTCCCTCCG 59.183 52.381 0.00 0.00 0.00 4.63
2577 2669 2.159407 CGACTTTCGTTCTACTCCCTCC 60.159 54.545 0.00 0.00 34.72 4.30
2578 2670 2.159407 CCGACTTTCGTTCTACTCCCTC 60.159 54.545 0.00 0.00 38.40 4.30
2579 2671 1.817447 CCGACTTTCGTTCTACTCCCT 59.183 52.381 0.00 0.00 38.40 4.20
2580 2672 1.815003 TCCGACTTTCGTTCTACTCCC 59.185 52.381 0.00 0.00 38.40 4.30
2581 2673 3.500014 CTTCCGACTTTCGTTCTACTCC 58.500 50.000 0.00 0.00 38.40 3.85
2582 2674 3.057666 ACCTTCCGACTTTCGTTCTACTC 60.058 47.826 0.00 0.00 38.40 2.59
2583 2675 2.889678 ACCTTCCGACTTTCGTTCTACT 59.110 45.455 0.00 0.00 38.40 2.57
2584 2676 2.985139 CACCTTCCGACTTTCGTTCTAC 59.015 50.000 0.00 0.00 38.40 2.59
2585 2677 2.608752 GCACCTTCCGACTTTCGTTCTA 60.609 50.000 0.00 0.00 38.40 2.10
2586 2678 1.872653 GCACCTTCCGACTTTCGTTCT 60.873 52.381 0.00 0.00 38.40 3.01
2587 2679 0.511653 GCACCTTCCGACTTTCGTTC 59.488 55.000 0.00 0.00 38.40 3.95
2588 2680 1.219522 CGCACCTTCCGACTTTCGTT 61.220 55.000 0.00 0.00 38.40 3.85
2589 2681 1.663702 CGCACCTTCCGACTTTCGT 60.664 57.895 0.00 0.00 38.40 3.85
2590 2682 1.663702 ACGCACCTTCCGACTTTCG 60.664 57.895 0.00 0.00 40.07 3.46
2591 2683 1.566018 CCACGCACCTTCCGACTTTC 61.566 60.000 0.00 0.00 0.00 2.62
2592 2684 1.597027 CCACGCACCTTCCGACTTT 60.597 57.895 0.00 0.00 0.00 2.66
2636 2732 1.220749 GGTAGACCAATGCGCCTGA 59.779 57.895 4.18 0.00 35.64 3.86
2651 2747 4.338964 TGTGTGTTTGTACTCTTCGAGGTA 59.661 41.667 0.00 0.00 33.35 3.08
2681 3312 0.962356 AGATGGCACTTTTCTGCGGG 60.962 55.000 0.00 0.00 38.12 6.13
2688 3319 3.117512 CCCCTATGGTAGATGGCACTTTT 60.118 47.826 0.00 0.00 0.00 2.27
2694 3325 1.296715 CGCCCCTATGGTAGATGGC 59.703 63.158 0.00 0.00 39.00 4.40
2695 3326 1.553690 CCCGCCCCTATGGTAGATGG 61.554 65.000 0.00 0.00 36.04 3.51
2696 3327 1.983224 CCCGCCCCTATGGTAGATG 59.017 63.158 0.00 0.00 36.04 2.90
2697 3328 1.918800 GCCCGCCCCTATGGTAGAT 60.919 63.158 0.00 0.00 36.04 1.98
2698 3329 1.732355 TAGCCCGCCCCTATGGTAGA 61.732 60.000 0.00 0.00 36.04 2.59
2699 3330 0.834687 TTAGCCCGCCCCTATGGTAG 60.835 60.000 0.00 0.00 36.04 3.18
2700 3331 0.400237 TTTAGCCCGCCCCTATGGTA 60.400 55.000 0.00 0.00 36.04 3.25
2701 3332 1.694882 TTTAGCCCGCCCCTATGGT 60.695 57.895 0.00 0.00 36.04 3.55
2702 3333 1.073199 CTTTAGCCCGCCCCTATGG 59.927 63.158 0.00 0.00 37.09 2.74
2703 3334 1.053424 TACTTTAGCCCGCCCCTATG 58.947 55.000 0.00 0.00 0.00 2.23
2704 3335 1.054231 GTACTTTAGCCCGCCCCTAT 58.946 55.000 0.00 0.00 0.00 2.57
2705 3336 1.050421 GGTACTTTAGCCCGCCCCTA 61.050 60.000 0.00 0.00 0.00 3.53
2706 3337 2.372890 GGTACTTTAGCCCGCCCCT 61.373 63.158 0.00 0.00 0.00 4.79
2707 3338 2.191375 GGTACTTTAGCCCGCCCC 59.809 66.667 0.00 0.00 0.00 5.80
2708 3339 1.450848 GTGGTACTTTAGCCCGCCC 60.451 63.158 0.00 0.00 0.00 6.13
2709 3340 0.107361 ATGTGGTACTTTAGCCCGCC 60.107 55.000 0.00 0.00 0.00 6.13
2710 3341 1.014352 CATGTGGTACTTTAGCCCGC 58.986 55.000 0.00 0.00 0.00 6.13
2711 3342 1.014352 GCATGTGGTACTTTAGCCCG 58.986 55.000 0.00 0.00 0.00 6.13
2712 3343 2.017049 CAGCATGTGGTACTTTAGCCC 58.983 52.381 0.00 0.00 0.00 5.19
2713 3344 1.401905 GCAGCATGTGGTACTTTAGCC 59.598 52.381 0.00 0.00 39.31 3.93
2714 3345 1.401905 GGCAGCATGTGGTACTTTAGC 59.598 52.381 0.00 0.00 39.31 3.09
2715 3346 2.710377 TGGCAGCATGTGGTACTTTAG 58.290 47.619 0.00 0.00 39.31 1.85
2716 3347 2.869101 TGGCAGCATGTGGTACTTTA 57.131 45.000 0.00 0.00 39.31 1.85
2717 3348 2.220653 ATGGCAGCATGTGGTACTTT 57.779 45.000 0.00 0.00 39.31 2.66
2718 3349 2.505407 TCTATGGCAGCATGTGGTACTT 59.495 45.455 0.00 0.00 39.31 2.24
2719 3350 2.118679 TCTATGGCAGCATGTGGTACT 58.881 47.619 0.00 0.00 39.31 2.73
2720 3351 2.213499 GTCTATGGCAGCATGTGGTAC 58.787 52.381 0.00 0.00 39.31 3.34
2721 3352 1.836802 TGTCTATGGCAGCATGTGGTA 59.163 47.619 0.00 0.00 39.31 3.25
2722 3353 0.620030 TGTCTATGGCAGCATGTGGT 59.380 50.000 0.00 0.00 39.31 4.16
2723 3354 1.402968 GTTGTCTATGGCAGCATGTGG 59.597 52.381 0.00 0.00 39.31 4.17
2727 3358 0.392863 TGCGTTGTCTATGGCAGCAT 60.393 50.000 0.00 0.00 0.00 3.79
2759 3390 4.084888 GGTACTGCGTGGCGTTGC 62.085 66.667 0.00 0.00 0.00 4.17
2770 3401 2.988010 TGGATAGCAGCTTGGTACTG 57.012 50.000 0.00 0.00 32.73 2.74
2771 3402 2.105477 CCATGGATAGCAGCTTGGTACT 59.895 50.000 5.56 0.00 32.73 2.73
2783 3414 2.229062 ACGTATCGTCAGCCATGGATAG 59.771 50.000 18.40 4.28 33.69 2.08
2785 3416 1.040646 ACGTATCGTCAGCCATGGAT 58.959 50.000 18.40 6.18 33.69 3.41
2801 3432 0.822532 AACTCTCCAGGTGTCGACGT 60.823 55.000 11.62 0.00 0.00 4.34
2818 3449 8.041323 TCTGTTAGAGAGGATGGAATTAACAAC 58.959 37.037 0.00 0.00 31.53 3.32
2824 3455 5.665459 CGTTCTGTTAGAGAGGATGGAATT 58.335 41.667 0.00 0.00 30.18 2.17
2838 3469 1.070134 ACTTGAGGCAGCGTTCTGTTA 59.930 47.619 0.00 0.00 42.29 2.41
2850 3481 1.141657 TGGCCATAGATGACTTGAGGC 59.858 52.381 0.00 0.00 36.27 4.70
2878 3509 5.105756 CGGATGGGAAAAAGTTGCTTAGAAT 60.106 40.000 0.00 0.00 0.00 2.40
2911 3542 1.860950 CATCTGCCGGTGAAAGATACG 59.139 52.381 1.90 0.00 0.00 3.06
2912 3543 2.906354 ACATCTGCCGGTGAAAGATAC 58.094 47.619 1.90 0.00 0.00 2.24
2913 3544 4.631131 CATACATCTGCCGGTGAAAGATA 58.369 43.478 1.90 0.00 0.00 1.98
2914 3545 3.470709 CATACATCTGCCGGTGAAAGAT 58.529 45.455 1.90 4.28 0.00 2.40
2949 3593 4.624364 TGTGCACCCGCCACTCAG 62.624 66.667 15.69 0.00 37.32 3.35
2950 3594 4.182433 TTGTGCACCCGCCACTCA 62.182 61.111 15.69 0.00 37.32 3.41
2951 3595 3.660111 GTTGTGCACCCGCCACTC 61.660 66.667 15.69 0.00 37.32 3.51
2952 3596 3.714487 AAGTTGTGCACCCGCCACT 62.714 57.895 15.69 5.69 37.32 4.00
2953 3597 2.781158 AAAGTTGTGCACCCGCCAC 61.781 57.895 15.69 3.33 37.32 5.01
2954 3598 2.441164 AAAGTTGTGCACCCGCCA 60.441 55.556 15.69 0.00 37.32 5.69
2955 3599 2.027460 CAAAGTTGTGCACCCGCC 59.973 61.111 15.69 0.00 37.32 6.13
2956 3600 1.008538 CTCAAAGTTGTGCACCCGC 60.009 57.895 15.69 4.27 39.24 6.13
2957 3601 1.008538 GCTCAAAGTTGTGCACCCG 60.009 57.895 15.69 0.00 44.54 5.28
2958 3602 0.031178 CAGCTCAAAGTTGTGCACCC 59.969 55.000 15.69 4.81 46.77 4.61
2959 3603 1.002033 CTCAGCTCAAAGTTGTGCACC 60.002 52.381 15.69 0.00 46.77 5.01
2960 3604 1.598924 GCTCAGCTCAAAGTTGTGCAC 60.599 52.381 10.75 10.75 46.77 4.57
2992 3656 5.465390 TCGGATAAGCTTCATTTTCCATACG 59.535 40.000 0.00 0.37 31.80 3.06
2993 3657 6.706270 TCTCGGATAAGCTTCATTTTCCATAC 59.294 38.462 0.00 0.00 31.80 2.39
2996 3660 5.097742 TCTCGGATAAGCTTCATTTTCCA 57.902 39.130 0.00 0.00 31.80 3.53
2998 3662 7.307692 GGAGAATCTCGGATAAGCTTCATTTTC 60.308 40.741 0.00 0.00 33.73 2.29
3004 3668 3.004944 ACGGAGAATCTCGGATAAGCTTC 59.995 47.826 22.05 0.00 35.31 3.86
3045 3709 0.819259 TGCAACAAGGAGCAGGACAC 60.819 55.000 0.00 0.00 35.51 3.67
3047 3711 1.251251 AATGCAACAAGGAGCAGGAC 58.749 50.000 0.00 0.00 44.94 3.85
3048 3712 1.614903 CAAATGCAACAAGGAGCAGGA 59.385 47.619 0.00 0.00 44.94 3.86
3057 3721 5.724328 TGAACTAAACCACAAATGCAACAA 58.276 33.333 0.00 0.00 0.00 2.83
3058 3722 5.330455 TGAACTAAACCACAAATGCAACA 57.670 34.783 0.00 0.00 0.00 3.33
3059 3723 4.209080 GCTGAACTAAACCACAAATGCAAC 59.791 41.667 0.00 0.00 0.00 4.17
3060 3724 4.367450 GCTGAACTAAACCACAAATGCAA 58.633 39.130 0.00 0.00 0.00 4.08
3061 3725 3.549827 CGCTGAACTAAACCACAAATGCA 60.550 43.478 0.00 0.00 0.00 3.96
3062 3726 2.979813 CGCTGAACTAAACCACAAATGC 59.020 45.455 0.00 0.00 0.00 3.56
3063 3727 3.974401 CACGCTGAACTAAACCACAAATG 59.026 43.478 0.00 0.00 0.00 2.32
3064 3728 3.880490 TCACGCTGAACTAAACCACAAAT 59.120 39.130 0.00 0.00 0.00 2.32
3065 3729 3.271729 TCACGCTGAACTAAACCACAAA 58.728 40.909 0.00 0.00 0.00 2.83
3066 3730 2.907634 TCACGCTGAACTAAACCACAA 58.092 42.857 0.00 0.00 0.00 3.33
3067 3731 2.605837 TCACGCTGAACTAAACCACA 57.394 45.000 0.00 0.00 0.00 4.17
3068 3732 5.390567 CCTTAATCACGCTGAACTAAACCAC 60.391 44.000 0.00 0.00 0.00 4.16
3069 3733 4.693566 CCTTAATCACGCTGAACTAAACCA 59.306 41.667 0.00 0.00 0.00 3.67
3070 3734 4.694037 ACCTTAATCACGCTGAACTAAACC 59.306 41.667 0.00 0.00 0.00 3.27
3071 3735 5.857822 ACCTTAATCACGCTGAACTAAAC 57.142 39.130 0.00 0.00 0.00 2.01
3072 3736 9.090692 GTATTACCTTAATCACGCTGAACTAAA 57.909 33.333 0.00 0.00 0.00 1.85
3073 3737 8.472413 AGTATTACCTTAATCACGCTGAACTAA 58.528 33.333 0.00 0.00 0.00 2.24
3074 3738 8.004087 AGTATTACCTTAATCACGCTGAACTA 57.996 34.615 0.00 0.00 0.00 2.24
3075 3739 6.875076 AGTATTACCTTAATCACGCTGAACT 58.125 36.000 0.00 0.00 0.00 3.01
3076 3740 6.200475 GGAGTATTACCTTAATCACGCTGAAC 59.800 42.308 0.00 0.00 0.00 3.18
3077 3741 6.278363 GGAGTATTACCTTAATCACGCTGAA 58.722 40.000 0.00 0.00 0.00 3.02
3078 3742 5.221382 GGGAGTATTACCTTAATCACGCTGA 60.221 44.000 0.00 0.00 0.00 4.26
3079 3743 4.989168 GGGAGTATTACCTTAATCACGCTG 59.011 45.833 0.00 0.00 0.00 5.18
3080 3744 4.900054 AGGGAGTATTACCTTAATCACGCT 59.100 41.667 0.00 0.00 31.68 5.07
3081 3745 5.211174 AGGGAGTATTACCTTAATCACGC 57.789 43.478 0.00 0.00 31.68 5.34
3082 3746 5.539193 AGGAGGGAGTATTACCTTAATCACG 59.461 44.000 0.00 0.00 37.18 4.35
3083 3747 6.014413 GGAGGAGGGAGTATTACCTTAATCAC 60.014 46.154 0.00 0.00 37.18 3.06
3084 3748 6.082707 GGAGGAGGGAGTATTACCTTAATCA 58.917 44.000 0.00 0.00 37.18 2.57
3085 3749 5.185442 CGGAGGAGGGAGTATTACCTTAATC 59.815 48.000 0.00 0.00 37.18 1.75
3086 3750 5.085219 CGGAGGAGGGAGTATTACCTTAAT 58.915 45.833 0.00 0.00 37.18 1.40
3087 3751 4.078980 ACGGAGGAGGGAGTATTACCTTAA 60.079 45.833 0.00 0.00 37.18 1.85
3088 3752 3.464833 ACGGAGGAGGGAGTATTACCTTA 59.535 47.826 0.00 0.00 37.18 2.69
3089 3753 2.246849 ACGGAGGAGGGAGTATTACCTT 59.753 50.000 0.00 0.00 37.18 3.50
3090 3754 1.858246 ACGGAGGAGGGAGTATTACCT 59.142 52.381 0.00 0.00 40.54 3.08
3091 3755 1.962100 CACGGAGGAGGGAGTATTACC 59.038 57.143 0.00 0.00 0.00 2.85
3092 3756 2.941480 TCACGGAGGAGGGAGTATTAC 58.059 52.381 0.00 0.00 0.00 1.89
3093 3757 3.203710 TCTTCACGGAGGAGGGAGTATTA 59.796 47.826 0.00 0.00 0.00 0.98
3094 3758 2.024273 TCTTCACGGAGGAGGGAGTATT 60.024 50.000 0.00 0.00 0.00 1.89
3095 3759 1.569548 TCTTCACGGAGGAGGGAGTAT 59.430 52.381 0.00 0.00 0.00 2.12
3096 3760 0.997363 TCTTCACGGAGGAGGGAGTA 59.003 55.000 0.00 0.00 0.00 2.59
3097 3761 0.114560 TTCTTCACGGAGGAGGGAGT 59.885 55.000 0.00 0.00 0.00 3.85
3098 3762 1.267121 TTTCTTCACGGAGGAGGGAG 58.733 55.000 0.00 0.00 0.00 4.30
3099 3763 1.952621 ATTTCTTCACGGAGGAGGGA 58.047 50.000 0.00 0.00 0.00 4.20
3100 3764 5.304614 TCTTATATTTCTTCACGGAGGAGGG 59.695 44.000 0.00 0.00 0.00 4.30
3101 3765 6.406692 TCTTATATTTCTTCACGGAGGAGG 57.593 41.667 0.00 0.00 0.00 4.30
3102 3766 6.451393 CCTCTTATATTTCTTCACGGAGGAG 58.549 44.000 0.00 0.00 39.87 3.69
3103 3767 5.304614 CCCTCTTATATTTCTTCACGGAGGA 59.695 44.000 0.00 0.00 39.87 3.71
3104 3768 5.070580 ACCCTCTTATATTTCTTCACGGAGG 59.929 44.000 0.00 0.00 37.96 4.30
3105 3769 6.041069 AGACCCTCTTATATTTCTTCACGGAG 59.959 42.308 0.00 0.00 0.00 4.63
3106 3770 5.897824 AGACCCTCTTATATTTCTTCACGGA 59.102 40.000 0.00 0.00 0.00 4.69
3107 3771 6.163135 AGACCCTCTTATATTTCTTCACGG 57.837 41.667 0.00 0.00 0.00 4.94
3108 3772 9.765795 ATTTAGACCCTCTTATATTTCTTCACG 57.234 33.333 0.00 0.00 0.00 4.35
3119 3783 9.401058 CACAAAGAATGATTTAGACCCTCTTAT 57.599 33.333 0.00 0.00 0.00 1.73
3120 3784 7.829211 CCACAAAGAATGATTTAGACCCTCTTA 59.171 37.037 0.00 0.00 0.00 2.10
3121 3785 6.660949 CCACAAAGAATGATTTAGACCCTCTT 59.339 38.462 0.00 0.00 0.00 2.85
3122 3786 6.183347 CCACAAAGAATGATTTAGACCCTCT 58.817 40.000 0.00 0.00 0.00 3.69
3123 3787 5.946377 ACCACAAAGAATGATTTAGACCCTC 59.054 40.000 0.00 0.00 0.00 4.30
3124 3788 5.892348 ACCACAAAGAATGATTTAGACCCT 58.108 37.500 0.00 0.00 0.00 4.34
3125 3789 6.590234 AACCACAAAGAATGATTTAGACCC 57.410 37.500 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.