Multiple sequence alignment - TraesCS5A01G242800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G242800 chr5A 100.000 3285 0 0 1 3285 457796244 457799528 0.000000e+00 6067.0
1 TraesCS5A01G242800 chr5A 94.453 667 33 2 2283 2949 22994956 22994294 0.000000e+00 1024.0
2 TraesCS5A01G242800 chr5A 97.612 335 8 0 2950 3284 457819673 457820007 2.840000e-160 575.0
3 TraesCS5A01G242800 chr5A 95.238 63 1 2 635 696 681462115 681462054 7.500000e-17 99.0
4 TraesCS5A01G242800 chr5D 93.794 1418 61 17 891 2287 356120029 356121440 0.000000e+00 2106.0
5 TraesCS5A01G242800 chr5D 83.887 1024 148 11 1180 2197 355455706 355456718 0.000000e+00 961.0
6 TraesCS5A01G242800 chr5B 92.740 1336 67 7 966 2287 420922856 420921537 0.000000e+00 1903.0
7 TraesCS5A01G242800 chr5B 84.000 1025 145 14 1180 2197 420180111 420181123 0.000000e+00 966.0
8 TraesCS5A01G242800 chr5B 98.980 98 1 0 538 635 608863194 608863097 3.370000e-40 176.0
9 TraesCS5A01G242800 chr5B 83.544 158 3 7 538 695 440262586 440262452 3.440000e-25 126.0
10 TraesCS5A01G242800 chr5B 95.455 66 1 2 632 695 655219400 655219465 1.610000e-18 104.0
11 TraesCS5A01G242800 chr5B 98.276 58 0 1 632 688 416028877 416028820 2.090000e-17 100.0
12 TraesCS5A01G242800 chr5B 96.721 61 1 1 635 695 440262786 440262727 2.090000e-17 100.0
13 TraesCS5A01G242800 chr3B 96.697 666 20 1 2284 2949 28078156 28078819 0.000000e+00 1107.0
14 TraesCS5A01G242800 chr3B 88.938 452 48 2 2284 2735 564027600 564028049 1.030000e-154 556.0
15 TraesCS5A01G242800 chr3B 98.990 99 1 0 537 635 624321882 624321784 9.370000e-41 178.0
16 TraesCS5A01G242800 chr3B 97.980 99 2 0 537 635 16893361 16893263 4.360000e-39 172.0
17 TraesCS5A01G242800 chr7B 96.472 652 21 1 2284 2935 41197718 41198367 0.000000e+00 1075.0
18 TraesCS5A01G242800 chr7B 85.312 640 51 16 2284 2896 637655520 637654897 3.600000e-174 621.0
19 TraesCS5A01G242800 chr7B 87.759 531 45 11 1 519 228368960 228369482 1.300000e-168 603.0
20 TraesCS5A01G242800 chr7B 89.340 197 14 2 693 885 228369479 228369672 1.180000e-59 241.0
21 TraesCS5A01G242800 chr7B 100.000 56 0 0 635 690 435855674 435855619 1.610000e-18 104.0
22 TraesCS5A01G242800 chr7A 93.853 667 37 3 2283 2949 473950918 473950256 0.000000e+00 1002.0
23 TraesCS5A01G242800 chr7A 94.065 337 20 0 2949 3285 578290158 578290494 2.260000e-141 512.0
24 TraesCS5A01G242800 chr7A 92.857 322 22 1 2957 3278 344705298 344704978 1.790000e-127 466.0
25 TraesCS5A01G242800 chr7A 95.556 135 6 0 2815 2949 665439089 665439223 1.980000e-52 217.0
26 TraesCS5A01G242800 chr7A 98.980 98 1 0 538 635 579564466 579564369 3.370000e-40 176.0
27 TraesCS5A01G242800 chr3A 93.103 667 43 1 2283 2949 715694586 715693923 0.000000e+00 974.0
28 TraesCS5A01G242800 chr3A 97.321 336 9 0 2950 3285 583772278 583771943 3.680000e-159 571.0
29 TraesCS5A01G242800 chr3A 96.736 337 11 0 2949 3285 583779954 583779618 2.210000e-156 562.0
30 TraesCS5A01G242800 chr3A 91.176 408 31 3 78 482 720462037 720462442 1.720000e-152 549.0
31 TraesCS5A01G242800 chr3A 95.238 105 5 0 19 123 720461940 720462044 2.030000e-37 167.0
32 TraesCS5A01G242800 chr3A 92.982 114 4 1 781 890 720462439 720462552 2.620000e-36 163.0
33 TraesCS5A01G242800 chr2B 84.655 971 131 13 1216 2178 583530217 583529257 0.000000e+00 952.0
34 TraesCS5A01G242800 chr2B 87.832 452 53 1 2284 2735 155816817 155817266 2.240000e-146 529.0
35 TraesCS5A01G242800 chr2B 89.401 217 14 6 2646 2855 94928569 94928783 6.990000e-67 265.0
36 TraesCS5A01G242800 chr2B 92.810 153 8 3 2800 2949 94928685 94928837 5.520000e-53 219.0
37 TraesCS5A01G242800 chr2B 100.000 98 0 0 538 635 725466853 725466756 7.240000e-42 182.0
38 TraesCS5A01G242800 chr2D 83.712 1013 140 13 1175 2178 496356246 496355250 0.000000e+00 933.0
39 TraesCS5A01G242800 chr2D 82.887 970 149 9 1216 2178 496352551 496351592 0.000000e+00 856.0
40 TraesCS5A01G242800 chr4A 83.250 997 139 9 1214 2197 460459820 460460801 0.000000e+00 891.0
41 TraesCS5A01G242800 chr4A 91.369 336 29 0 2950 3285 134689629 134689294 8.310000e-126 460.0
42 TraesCS5A01G242800 chr1A 95.933 541 11 3 1 533 560432251 560431714 0.000000e+00 867.0
43 TraesCS5A01G242800 chr1A 90.052 573 48 5 2284 2855 466348284 466348848 0.000000e+00 734.0
44 TraesCS5A01G242800 chr1A 91.667 336 27 1 2950 3285 408714180 408714514 6.420000e-127 464.0
45 TraesCS5A01G242800 chr1A 96.324 136 4 1 2815 2949 466348766 466348901 4.270000e-54 222.0
46 TraesCS5A01G242800 chr1A 92.086 139 4 2 757 891 560431711 560431576 4.330000e-44 189.0
47 TraesCS5A01G242800 chr1A 95.238 63 1 2 632 693 588470173 588470112 7.500000e-17 99.0
48 TraesCS5A01G242800 chr4D 82.766 998 142 16 1214 2197 116132233 116131252 0.000000e+00 863.0
49 TraesCS5A01G242800 chr2A 91.202 466 31 4 78 533 52430056 52429591 2.780000e-175 625.0
50 TraesCS5A01G242800 chr2A 85.542 415 59 1 1667 2081 423140892 423140479 1.810000e-117 433.0
51 TraesCS5A01G242800 chr2A 91.241 137 5 2 759 891 52429490 52429357 2.600000e-41 180.0
52 TraesCS5A01G242800 chr2A 94.286 105 6 0 19 123 52430153 52430049 9.430000e-36 161.0
53 TraesCS5A01G242800 chr4B 87.611 452 54 1 2284 2735 5821791 5822240 1.040000e-144 523.0
54 TraesCS5A01G242800 chr4B 100.000 98 0 0 538 635 660113530 660113627 7.240000e-42 182.0
55 TraesCS5A01G242800 chr6A 93.051 331 22 1 2956 3285 492757566 492757236 1.770000e-132 483.0
56 TraesCS5A01G242800 chr6A 91.420 338 28 1 2949 3285 262670867 262670530 2.310000e-126 462.0
57 TraesCS5A01G242800 chr6B 98.077 104 1 1 531 634 63665337 63665235 2.600000e-41 180.0
58 TraesCS5A01G242800 chr6B 98.990 99 1 0 537 635 34199834 34199736 9.370000e-41 178.0
59 TraesCS5A01G242800 chr6B 98.980 98 1 0 538 635 664459028 664459125 3.370000e-40 176.0
60 TraesCS5A01G242800 chr6B 96.667 60 0 2 632 690 184811944 184812002 7.500000e-17 99.0
61 TraesCS5A01G242800 chr6B 94.643 56 3 0 2894 2949 200557716 200557661 1.620000e-13 87.9
62 TraesCS5A01G242800 chr1B 92.958 71 4 1 632 701 118429470 118429540 5.800000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G242800 chr5A 457796244 457799528 3284 False 6067.0 6067 100.0000 1 3285 1 chr5A.!!$F1 3284
1 TraesCS5A01G242800 chr5A 22994294 22994956 662 True 1024.0 1024 94.4530 2283 2949 1 chr5A.!!$R1 666
2 TraesCS5A01G242800 chr5D 356120029 356121440 1411 False 2106.0 2106 93.7940 891 2287 1 chr5D.!!$F2 1396
3 TraesCS5A01G242800 chr5D 355455706 355456718 1012 False 961.0 961 83.8870 1180 2197 1 chr5D.!!$F1 1017
4 TraesCS5A01G242800 chr5B 420921537 420922856 1319 True 1903.0 1903 92.7400 966 2287 1 chr5B.!!$R2 1321
5 TraesCS5A01G242800 chr5B 420180111 420181123 1012 False 966.0 966 84.0000 1180 2197 1 chr5B.!!$F1 1017
6 TraesCS5A01G242800 chr3B 28078156 28078819 663 False 1107.0 1107 96.6970 2284 2949 1 chr3B.!!$F1 665
7 TraesCS5A01G242800 chr7B 41197718 41198367 649 False 1075.0 1075 96.4720 2284 2935 1 chr7B.!!$F1 651
8 TraesCS5A01G242800 chr7B 637654897 637655520 623 True 621.0 621 85.3120 2284 2896 1 chr7B.!!$R2 612
9 TraesCS5A01G242800 chr7B 228368960 228369672 712 False 422.0 603 88.5495 1 885 2 chr7B.!!$F2 884
10 TraesCS5A01G242800 chr7A 473950256 473950918 662 True 1002.0 1002 93.8530 2283 2949 1 chr7A.!!$R2 666
11 TraesCS5A01G242800 chr3A 715693923 715694586 663 True 974.0 974 93.1030 2283 2949 1 chr3A.!!$R3 666
12 TraesCS5A01G242800 chr3A 720461940 720462552 612 False 293.0 549 93.1320 19 890 3 chr3A.!!$F1 871
13 TraesCS5A01G242800 chr2B 583529257 583530217 960 True 952.0 952 84.6550 1216 2178 1 chr2B.!!$R1 962
14 TraesCS5A01G242800 chr2D 496351592 496356246 4654 True 894.5 933 83.2995 1175 2178 2 chr2D.!!$R1 1003
15 TraesCS5A01G242800 chr4A 460459820 460460801 981 False 891.0 891 83.2500 1214 2197 1 chr4A.!!$F1 983
16 TraesCS5A01G242800 chr1A 560431576 560432251 675 True 528.0 867 94.0095 1 891 2 chr1A.!!$R2 890
17 TraesCS5A01G242800 chr1A 466348284 466348901 617 False 478.0 734 93.1880 2284 2949 2 chr1A.!!$F2 665
18 TraesCS5A01G242800 chr4D 116131252 116132233 981 True 863.0 863 82.7660 1214 2197 1 chr4D.!!$R1 983
19 TraesCS5A01G242800 chr2A 52429357 52430153 796 True 322.0 625 92.2430 19 891 3 chr2A.!!$R2 872

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
610 841 0.036022 TGGATGACACGTGGCATTCA 59.964 50.0 36.64 36.64 46.54 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2297 3936 1.135603 GCAGCTGCGACATGAATTTCA 60.136 47.619 25.23 0.75 0.0 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
367 411 2.160813 AGTGTGGACAACAACAAACGAC 59.839 45.455 0.00 0.00 41.57 4.34
408 453 3.341823 CATGAAGTAAGCTCAGCCAACT 58.658 45.455 0.00 0.00 0.00 3.16
450 495 7.106439 TCTTGTGCTTTATTTTTCAAGACCA 57.894 32.000 0.00 0.00 37.13 4.02
537 768 4.104183 GGCCACGATCGGGGGAAA 62.104 66.667 36.10 0.00 39.58 3.13
538 769 2.045731 GCCACGATCGGGGGAAAA 60.046 61.111 36.10 0.00 39.58 2.29
539 770 1.676303 GCCACGATCGGGGGAAAAA 60.676 57.895 36.10 0.00 39.58 1.94
569 800 3.383162 AGACCAGGTCTCACGGATT 57.617 52.632 17.31 0.00 38.71 3.01
570 801 2.526888 AGACCAGGTCTCACGGATTA 57.473 50.000 17.31 0.00 38.71 1.75
571 802 2.379972 AGACCAGGTCTCACGGATTAG 58.620 52.381 17.31 0.00 38.71 1.73
572 803 0.824759 ACCAGGTCTCACGGATTAGC 59.175 55.000 0.00 0.00 0.00 3.09
573 804 0.824109 CCAGGTCTCACGGATTAGCA 59.176 55.000 0.00 0.00 0.00 3.49
574 805 1.202463 CCAGGTCTCACGGATTAGCAG 60.202 57.143 0.00 0.00 0.00 4.24
575 806 1.115467 AGGTCTCACGGATTAGCAGG 58.885 55.000 0.00 0.00 0.00 4.85
576 807 0.824759 GGTCTCACGGATTAGCAGGT 59.175 55.000 0.00 0.00 0.00 4.00
577 808 1.471676 GGTCTCACGGATTAGCAGGTG 60.472 57.143 0.00 0.00 0.00 4.00
578 809 1.476891 GTCTCACGGATTAGCAGGTGA 59.523 52.381 0.00 0.00 37.77 4.02
580 811 1.847328 TCACGGATTAGCAGGTGAGA 58.153 50.000 0.00 0.00 34.71 3.27
581 812 1.476891 TCACGGATTAGCAGGTGAGAC 59.523 52.381 0.00 0.00 34.71 3.36
582 813 0.824759 ACGGATTAGCAGGTGAGACC 59.175 55.000 0.00 0.00 38.99 3.85
583 814 0.105039 CGGATTAGCAGGTGAGACCC 59.895 60.000 0.00 0.00 39.75 4.46
584 815 1.204146 GGATTAGCAGGTGAGACCCA 58.796 55.000 0.00 0.00 39.75 4.51
585 816 1.771255 GGATTAGCAGGTGAGACCCAT 59.229 52.381 0.00 0.00 39.75 4.00
586 817 2.173569 GGATTAGCAGGTGAGACCCATT 59.826 50.000 0.00 0.00 39.75 3.16
587 818 3.471680 GATTAGCAGGTGAGACCCATTC 58.528 50.000 0.00 0.00 39.75 2.67
588 819 2.254152 TAGCAGGTGAGACCCATTCT 57.746 50.000 0.00 0.00 39.75 2.40
589 820 0.617413 AGCAGGTGAGACCCATTCTG 59.383 55.000 0.00 0.00 39.75 3.02
590 821 0.615331 GCAGGTGAGACCCATTCTGA 59.385 55.000 0.00 0.00 39.75 3.27
591 822 1.211457 GCAGGTGAGACCCATTCTGAT 59.789 52.381 0.00 0.00 39.75 2.90
592 823 2.915349 CAGGTGAGACCCATTCTGATG 58.085 52.381 0.00 0.00 39.75 3.07
603 834 3.938778 CATTCTGATGGATGACACGTG 57.061 47.619 15.48 15.48 0.00 4.49
604 835 2.385013 TTCTGATGGATGACACGTGG 57.615 50.000 21.57 1.66 0.00 4.94
605 836 0.108186 TCTGATGGATGACACGTGGC 60.108 55.000 21.57 19.24 0.00 5.01
606 837 0.391528 CTGATGGATGACACGTGGCA 60.392 55.000 29.28 29.28 37.54 4.92
608 839 1.339920 TGATGGATGACACGTGGCATT 60.340 47.619 36.07 22.11 45.42 3.56
609 840 1.331756 GATGGATGACACGTGGCATTC 59.668 52.381 36.07 34.16 45.42 2.67
610 841 0.036022 TGGATGACACGTGGCATTCA 59.964 50.000 36.64 36.64 46.54 2.57
611 842 0.447801 GGATGACACGTGGCATTCAC 59.552 55.000 36.07 24.74 45.42 3.18
612 843 1.155889 GATGACACGTGGCATTCACA 58.844 50.000 36.07 9.07 45.42 3.58
613 844 1.535028 GATGACACGTGGCATTCACAA 59.465 47.619 36.07 8.22 45.42 3.33
614 845 1.383523 TGACACGTGGCATTCACAAA 58.616 45.000 23.03 0.00 46.36 2.83
615 846 1.952990 TGACACGTGGCATTCACAAAT 59.047 42.857 23.03 0.00 46.36 2.32
616 847 2.031245 TGACACGTGGCATTCACAAATC 60.031 45.455 23.03 3.54 46.36 2.17
617 848 1.952990 ACACGTGGCATTCACAAATCA 59.047 42.857 21.57 0.00 46.36 2.57
618 849 2.287547 ACACGTGGCATTCACAAATCAC 60.288 45.455 21.57 0.00 46.36 3.06
619 850 1.952990 ACGTGGCATTCACAAATCACA 59.047 42.857 0.00 0.00 46.36 3.58
620 851 2.360483 ACGTGGCATTCACAAATCACAA 59.640 40.909 0.00 0.00 46.36 3.33
621 852 3.181482 ACGTGGCATTCACAAATCACAAA 60.181 39.130 0.00 0.00 46.36 2.83
622 853 3.426191 CGTGGCATTCACAAATCACAAAG 59.574 43.478 0.00 0.00 46.36 2.77
623 854 3.184986 GTGGCATTCACAAATCACAAAGC 59.815 43.478 0.00 0.00 45.39 3.51
624 855 3.181468 TGGCATTCACAAATCACAAAGCA 60.181 39.130 0.00 0.00 0.00 3.91
625 856 3.998341 GGCATTCACAAATCACAAAGCAT 59.002 39.130 0.00 0.00 0.00 3.79
626 857 4.092383 GGCATTCACAAATCACAAAGCATC 59.908 41.667 0.00 0.00 0.00 3.91
627 858 4.092383 GCATTCACAAATCACAAAGCATCC 59.908 41.667 0.00 0.00 0.00 3.51
628 859 4.933505 TTCACAAATCACAAAGCATCCA 57.066 36.364 0.00 0.00 0.00 3.41
629 860 4.241590 TCACAAATCACAAAGCATCCAC 57.758 40.909 0.00 0.00 0.00 4.02
630 861 3.005684 TCACAAATCACAAAGCATCCACC 59.994 43.478 0.00 0.00 0.00 4.61
631 862 2.299867 ACAAATCACAAAGCATCCACCC 59.700 45.455 0.00 0.00 0.00 4.61
632 863 1.560505 AATCACAAAGCATCCACCCC 58.439 50.000 0.00 0.00 0.00 4.95
633 864 0.409092 ATCACAAAGCATCCACCCCA 59.591 50.000 0.00 0.00 0.00 4.96
634 865 0.539438 TCACAAAGCATCCACCCCAC 60.539 55.000 0.00 0.00 0.00 4.61
635 866 0.827089 CACAAAGCATCCACCCCACA 60.827 55.000 0.00 0.00 0.00 4.17
636 867 0.540365 ACAAAGCATCCACCCCACAG 60.540 55.000 0.00 0.00 0.00 3.66
637 868 1.077265 AAAGCATCCACCCCACAGG 59.923 57.895 0.00 0.00 43.78 4.00
648 879 4.394712 CCACAGGGCGGGTCTCAC 62.395 72.222 0.00 0.00 0.00 3.51
649 880 4.394712 CACAGGGCGGGTCTCACC 62.395 72.222 0.00 0.00 37.60 4.02
650 881 4.640690 ACAGGGCGGGTCTCACCT 62.641 66.667 0.00 0.00 38.64 4.00
663 894 6.672266 GGGTCTCACCTGATTTATATGAGA 57.328 41.667 0.00 0.00 42.63 3.27
667 898 7.295322 TCTCACCTGATTTATATGAGACCTG 57.705 40.000 0.00 0.00 40.59 4.00
668 899 6.268617 TCTCACCTGATTTATATGAGACCTGG 59.731 42.308 0.00 0.00 40.59 4.45
669 900 5.905331 TCACCTGATTTATATGAGACCTGGT 59.095 40.000 0.00 0.00 0.00 4.00
670 901 6.042093 TCACCTGATTTATATGAGACCTGGTC 59.958 42.308 19.20 19.20 0.00 4.02
671 902 6.042552 CACCTGATTTATATGAGACCTGGTCT 59.957 42.308 28.70 28.70 46.42 3.85
703 934 1.128200 TTTCCACGATCGGGATCCAT 58.872 50.000 21.38 0.00 33.63 3.41
711 942 1.552792 GATCGGGATCCATCCTCCTTC 59.447 57.143 15.23 0.00 46.35 3.46
736 967 7.440856 TCAAAAAGGAAACAAAATATGGACAGC 59.559 33.333 0.00 0.00 0.00 4.40
740 971 0.098728 ACAAAATATGGACAGCGCGC 59.901 50.000 26.66 26.66 0.00 6.86
742 973 1.366111 AAAATATGGACAGCGCGCGT 61.366 50.000 32.35 25.60 0.00 6.01
773 1004 3.371168 CGAACCATTATTCCCGCAAATG 58.629 45.455 0.00 0.00 0.00 2.32
777 1008 3.221771 CCATTATTCCCGCAAATGAGGA 58.778 45.455 4.63 0.00 37.14 3.71
778 1009 3.828451 CCATTATTCCCGCAAATGAGGAT 59.172 43.478 4.63 0.00 37.14 3.24
779 1010 4.082571 CCATTATTCCCGCAAATGAGGATC 60.083 45.833 4.63 0.00 37.14 3.36
850 1081 4.493747 CGCCTCCGAGGTCGTTCC 62.494 72.222 16.09 0.00 37.80 3.62
891 1126 3.879892 GGCAGGATTTTAGCTTTCTCGAT 59.120 43.478 0.00 0.00 0.00 3.59
892 1127 4.336713 GGCAGGATTTTAGCTTTCTCGATT 59.663 41.667 0.00 0.00 0.00 3.34
893 1128 5.527582 GGCAGGATTTTAGCTTTCTCGATTA 59.472 40.000 0.00 0.00 0.00 1.75
894 1129 6.205658 GGCAGGATTTTAGCTTTCTCGATTAT 59.794 38.462 0.00 0.00 0.00 1.28
895 1130 7.294473 GCAGGATTTTAGCTTTCTCGATTATC 58.706 38.462 0.00 0.00 0.00 1.75
926 1161 9.816354 AATAAAAATTTCTTCATATTCCCACCG 57.184 29.630 0.00 0.00 0.00 4.94
931 1166 2.367567 TCTTCATATTCCCACCGGTAGC 59.632 50.000 6.87 0.00 0.00 3.58
941 1176 2.108514 ACCGGTAGCGTTCGATCGA 61.109 57.895 15.15 15.15 0.00 3.59
948 1183 2.203800 AGCGTTCGATCGATGCTAAA 57.796 45.000 31.81 11.51 35.44 1.85
949 1184 2.536365 AGCGTTCGATCGATGCTAAAA 58.464 42.857 31.81 10.84 35.44 1.52
992 1227 2.710902 CGACCCGCACCAGATCTCA 61.711 63.158 0.00 0.00 0.00 3.27
1006 1241 1.967066 GATCTCACCAGATCCCATCGT 59.033 52.381 1.10 0.00 46.83 3.73
1014 1253 1.118356 AGATCCCATCGTCCAGCTCC 61.118 60.000 0.00 0.00 0.00 4.70
1033 1272 0.320073 CCTTTCCGTAACAGCGACCA 60.320 55.000 0.00 0.00 0.00 4.02
1065 1308 3.305950 CGGACCAGAAAATGCCAATTTCA 60.306 43.478 7.90 0.00 38.86 2.69
1079 1322 3.181503 CCAATTTCAGCTCCAGAATCGTG 60.182 47.826 0.00 0.00 0.00 4.35
1150 1393 2.700897 CTCTACCAGTTCCCGATCCAAT 59.299 50.000 0.00 0.00 0.00 3.16
1156 1405 0.818040 GTTCCCGATCCAATTCCCCG 60.818 60.000 0.00 0.00 0.00 5.73
1385 1649 2.522193 CCGCCTCTACCTCCCCTC 60.522 72.222 0.00 0.00 0.00 4.30
1386 1650 2.522193 CGCCTCTACCTCCCCTCC 60.522 72.222 0.00 0.00 0.00 4.30
1387 1651 2.522193 GCCTCTACCTCCCCTCCG 60.522 72.222 0.00 0.00 0.00 4.63
2272 3911 9.871238 ATACATTTGTATGAAGTTCGTAAGACT 57.129 29.630 6.37 0.00 42.47 3.24
2297 3936 2.091278 TGATGAATACTCCCTCCGTCCT 60.091 50.000 0.00 0.00 0.00 3.85
2315 3954 1.741706 CCTGAAATTCATGTCGCAGCT 59.258 47.619 0.00 0.00 0.00 4.24
2366 4005 3.719816 GGACAAAACCCGAAGTCCT 57.280 52.632 0.00 0.00 45.46 3.85
2473 4670 1.306226 CCTTCTCTCCCTTCCCCGT 60.306 63.158 0.00 0.00 0.00 5.28
2536 5485 2.676822 TCACCGGCGCTCTCTTCT 60.677 61.111 7.64 0.00 0.00 2.85
2575 5525 5.295950 TGCATCGGTGAAAATGTGATTTTT 58.704 33.333 0.00 0.00 42.15 1.94
2949 6239 3.523681 AAGGTGCCCCTCCCCTTCT 62.524 63.158 0.00 0.00 41.56 2.85
2950 6240 3.732849 GGTGCCCCTCCCCTTCTG 61.733 72.222 0.00 0.00 0.00 3.02
2951 6241 2.936032 GTGCCCCTCCCCTTCTGT 60.936 66.667 0.00 0.00 0.00 3.41
2952 6242 2.935481 TGCCCCTCCCCTTCTGTG 60.935 66.667 0.00 0.00 0.00 3.66
2953 6243 2.610859 GCCCCTCCCCTTCTGTGA 60.611 66.667 0.00 0.00 0.00 3.58
2954 6244 2.003548 GCCCCTCCCCTTCTGTGAT 61.004 63.158 0.00 0.00 0.00 3.06
2955 6245 1.918253 CCCCTCCCCTTCTGTGATG 59.082 63.158 0.00 0.00 0.00 3.07
2956 6246 1.225704 CCCTCCCCTTCTGTGATGC 59.774 63.158 0.00 0.00 0.00 3.91
2957 6247 1.225704 CCTCCCCTTCTGTGATGCC 59.774 63.158 0.00 0.00 0.00 4.40
2958 6248 1.225704 CTCCCCTTCTGTGATGCCC 59.774 63.158 0.00 0.00 0.00 5.36
2959 6249 2.276309 CTCCCCTTCTGTGATGCCCC 62.276 65.000 0.00 0.00 0.00 5.80
2960 6250 2.124570 CCCTTCTGTGATGCCCCG 60.125 66.667 0.00 0.00 0.00 5.73
2961 6251 2.669133 CCCTTCTGTGATGCCCCGA 61.669 63.158 0.00 0.00 0.00 5.14
2962 6252 1.153289 CCTTCTGTGATGCCCCGAG 60.153 63.158 0.00 0.00 0.00 4.63
2963 6253 1.617018 CCTTCTGTGATGCCCCGAGA 61.617 60.000 0.00 0.00 0.00 4.04
2964 6254 0.460987 CTTCTGTGATGCCCCGAGAC 60.461 60.000 0.00 0.00 0.00 3.36
2965 6255 1.899437 TTCTGTGATGCCCCGAGACC 61.899 60.000 0.00 0.00 0.00 3.85
2966 6256 3.723235 CTGTGATGCCCCGAGACCG 62.723 68.421 0.00 0.00 0.00 4.79
2967 6257 3.458163 GTGATGCCCCGAGACCGA 61.458 66.667 0.00 0.00 38.22 4.69
2968 6258 2.443952 TGATGCCCCGAGACCGAT 60.444 61.111 0.00 0.00 38.22 4.18
2969 6259 2.029666 GATGCCCCGAGACCGATG 59.970 66.667 0.00 0.00 38.22 3.84
2970 6260 2.764128 ATGCCCCGAGACCGATGT 60.764 61.111 0.00 0.00 38.22 3.06
2971 6261 2.978452 GATGCCCCGAGACCGATGTG 62.978 65.000 0.00 0.00 38.22 3.21
2973 6263 4.530857 CCCCGAGACCGATGTGCC 62.531 72.222 0.00 0.00 38.22 5.01
2974 6264 3.770040 CCCGAGACCGATGTGCCA 61.770 66.667 0.00 0.00 38.22 4.92
2975 6265 2.202797 CCGAGACCGATGTGCCAG 60.203 66.667 0.00 0.00 38.22 4.85
2976 6266 2.202797 CGAGACCGATGTGCCAGG 60.203 66.667 0.00 0.00 38.22 4.45
2977 6267 2.982130 GAGACCGATGTGCCAGGT 59.018 61.111 0.00 0.00 41.63 4.00
2978 6268 1.448540 GAGACCGATGTGCCAGGTG 60.449 63.158 0.00 0.00 38.57 4.00
2979 6269 2.172483 GAGACCGATGTGCCAGGTGT 62.172 60.000 0.00 0.00 38.57 4.16
2980 6270 1.741770 GACCGATGTGCCAGGTGTC 60.742 63.158 0.00 0.00 38.57 3.67
2981 6271 2.436646 CCGATGTGCCAGGTGTCC 60.437 66.667 0.00 0.00 0.00 4.02
2982 6272 2.665000 CGATGTGCCAGGTGTCCT 59.335 61.111 0.00 0.00 0.00 3.85
2983 6273 1.448540 CGATGTGCCAGGTGTCCTC 60.449 63.158 0.00 0.00 0.00 3.71
2984 6274 1.078143 GATGTGCCAGGTGTCCTCC 60.078 63.158 0.00 0.00 0.00 4.30
2985 6275 1.841302 GATGTGCCAGGTGTCCTCCA 61.841 60.000 0.00 0.00 0.00 3.86
2986 6276 1.845627 ATGTGCCAGGTGTCCTCCAG 61.846 60.000 0.00 0.00 0.00 3.86
2987 6277 2.122413 TGCCAGGTGTCCTCCAGT 60.122 61.111 0.00 0.00 0.00 4.00
2988 6278 1.770110 TGCCAGGTGTCCTCCAGTT 60.770 57.895 0.00 0.00 0.00 3.16
2989 6279 0.472925 TGCCAGGTGTCCTCCAGTTA 60.473 55.000 0.00 0.00 0.00 2.24
2990 6280 0.912486 GCCAGGTGTCCTCCAGTTAT 59.088 55.000 0.00 0.00 0.00 1.89
2991 6281 1.282157 GCCAGGTGTCCTCCAGTTATT 59.718 52.381 0.00 0.00 0.00 1.40
2992 6282 2.681097 GCCAGGTGTCCTCCAGTTATTC 60.681 54.545 0.00 0.00 0.00 1.75
2993 6283 2.418746 CCAGGTGTCCTCCAGTTATTCG 60.419 54.545 0.00 0.00 0.00 3.34
2994 6284 2.233922 CAGGTGTCCTCCAGTTATTCGT 59.766 50.000 0.00 0.00 0.00 3.85
2995 6285 2.904434 AGGTGTCCTCCAGTTATTCGTT 59.096 45.455 0.00 0.00 0.00 3.85
2996 6286 3.000727 GGTGTCCTCCAGTTATTCGTTG 58.999 50.000 0.00 0.00 0.00 4.10
2997 6287 3.556423 GGTGTCCTCCAGTTATTCGTTGT 60.556 47.826 0.00 0.00 0.00 3.32
2998 6288 4.062991 GTGTCCTCCAGTTATTCGTTGTT 58.937 43.478 0.00 0.00 0.00 2.83
2999 6289 4.062293 TGTCCTCCAGTTATTCGTTGTTG 58.938 43.478 0.00 0.00 0.00 3.33
3000 6290 4.062991 GTCCTCCAGTTATTCGTTGTTGT 58.937 43.478 0.00 0.00 0.00 3.32
3001 6291 4.514066 GTCCTCCAGTTATTCGTTGTTGTT 59.486 41.667 0.00 0.00 0.00 2.83
3002 6292 4.513692 TCCTCCAGTTATTCGTTGTTGTTG 59.486 41.667 0.00 0.00 0.00 3.33
3003 6293 4.217754 TCCAGTTATTCGTTGTTGTTGC 57.782 40.909 0.00 0.00 0.00 4.17
3004 6294 3.003897 TCCAGTTATTCGTTGTTGTTGCC 59.996 43.478 0.00 0.00 0.00 4.52
3005 6295 3.004315 CCAGTTATTCGTTGTTGTTGCCT 59.996 43.478 0.00 0.00 0.00 4.75
3006 6296 4.499019 CCAGTTATTCGTTGTTGTTGCCTT 60.499 41.667 0.00 0.00 0.00 4.35
3007 6297 4.440758 CAGTTATTCGTTGTTGTTGCCTTG 59.559 41.667 0.00 0.00 0.00 3.61
3008 6298 4.097286 AGTTATTCGTTGTTGTTGCCTTGT 59.903 37.500 0.00 0.00 0.00 3.16
3009 6299 2.553079 TTCGTTGTTGTTGCCTTGTC 57.447 45.000 0.00 0.00 0.00 3.18
3010 6300 1.745232 TCGTTGTTGTTGCCTTGTCT 58.255 45.000 0.00 0.00 0.00 3.41
3011 6301 2.088423 TCGTTGTTGTTGCCTTGTCTT 58.912 42.857 0.00 0.00 0.00 3.01
3012 6302 2.490115 TCGTTGTTGTTGCCTTGTCTTT 59.510 40.909 0.00 0.00 0.00 2.52
3013 6303 3.057174 TCGTTGTTGTTGCCTTGTCTTTT 60.057 39.130 0.00 0.00 0.00 2.27
3014 6304 3.060628 CGTTGTTGTTGCCTTGTCTTTTG 59.939 43.478 0.00 0.00 0.00 2.44
3015 6305 2.615869 TGTTGTTGCCTTGTCTTTTGC 58.384 42.857 0.00 0.00 0.00 3.68
3016 6306 2.233431 TGTTGTTGCCTTGTCTTTTGCT 59.767 40.909 0.00 0.00 0.00 3.91
3017 6307 2.860136 GTTGTTGCCTTGTCTTTTGCTC 59.140 45.455 0.00 0.00 0.00 4.26
3018 6308 1.065401 TGTTGCCTTGTCTTTTGCTCG 59.935 47.619 0.00 0.00 0.00 5.03
3019 6309 0.030638 TTGCCTTGTCTTTTGCTCGC 59.969 50.000 0.00 0.00 0.00 5.03
3020 6310 1.441016 GCCTTGTCTTTTGCTCGCG 60.441 57.895 0.00 0.00 0.00 5.87
3021 6311 1.941812 CCTTGTCTTTTGCTCGCGT 59.058 52.632 5.77 0.00 0.00 6.01
3022 6312 0.384725 CCTTGTCTTTTGCTCGCGTG 60.385 55.000 5.77 4.44 0.00 5.34
3023 6313 0.304705 CTTGTCTTTTGCTCGCGTGT 59.695 50.000 5.77 0.00 0.00 4.49
3024 6314 0.303493 TTGTCTTTTGCTCGCGTGTC 59.697 50.000 5.77 0.50 0.00 3.67
3025 6315 1.154836 GTCTTTTGCTCGCGTGTCG 60.155 57.895 5.77 0.00 40.15 4.35
3036 6326 3.489731 CGTGTCGCATCTTGCCAT 58.510 55.556 0.00 0.00 41.12 4.40
3037 6327 1.061411 CGTGTCGCATCTTGCCATG 59.939 57.895 0.00 0.00 41.12 3.66
3038 6328 1.638388 CGTGTCGCATCTTGCCATGT 61.638 55.000 0.00 0.00 41.12 3.21
3039 6329 0.097674 GTGTCGCATCTTGCCATGTC 59.902 55.000 0.00 0.00 41.12 3.06
3040 6330 0.321475 TGTCGCATCTTGCCATGTCA 60.321 50.000 0.00 0.00 41.12 3.58
3041 6331 1.019673 GTCGCATCTTGCCATGTCAT 58.980 50.000 0.00 0.00 41.12 3.06
3042 6332 1.003116 GTCGCATCTTGCCATGTCATC 60.003 52.381 0.00 0.00 41.12 2.92
3043 6333 1.018910 CGCATCTTGCCATGTCATCA 58.981 50.000 0.00 0.00 41.12 3.07
3044 6334 1.607148 CGCATCTTGCCATGTCATCAT 59.393 47.619 0.00 0.00 41.12 2.45
3045 6335 2.809696 CGCATCTTGCCATGTCATCATA 59.190 45.455 0.00 0.00 41.12 2.15
3046 6336 3.364664 CGCATCTTGCCATGTCATCATAC 60.365 47.826 0.00 0.00 41.12 2.39
3047 6337 3.364664 GCATCTTGCCATGTCATCATACG 60.365 47.826 0.00 0.00 37.42 3.06
3048 6338 2.212652 TCTTGCCATGTCATCATACGC 58.787 47.619 0.00 0.00 32.47 4.42
3049 6339 1.941975 CTTGCCATGTCATCATACGCA 59.058 47.619 0.00 0.00 37.00 5.24
3050 6340 2.259266 TGCCATGTCATCATACGCAT 57.741 45.000 0.00 0.00 35.23 4.73
3051 6341 2.574450 TGCCATGTCATCATACGCATT 58.426 42.857 0.00 0.00 35.23 3.56
3052 6342 2.291190 TGCCATGTCATCATACGCATTG 59.709 45.455 0.00 0.00 35.23 2.82
3053 6343 2.919387 GCCATGTCATCATACGCATTGC 60.919 50.000 0.00 0.00 32.32 3.56
3054 6344 2.291190 CCATGTCATCATACGCATTGCA 59.709 45.455 9.69 0.00 32.47 4.08
3055 6345 3.057806 CCATGTCATCATACGCATTGCAT 60.058 43.478 9.69 0.00 32.47 3.96
3056 6346 3.883631 TGTCATCATACGCATTGCATC 57.116 42.857 9.69 0.00 0.00 3.91
3057 6347 3.204526 TGTCATCATACGCATTGCATCA 58.795 40.909 9.69 0.00 0.00 3.07
3058 6348 3.816523 TGTCATCATACGCATTGCATCAT 59.183 39.130 9.69 0.00 0.00 2.45
3059 6349 4.083696 TGTCATCATACGCATTGCATCATC 60.084 41.667 9.69 0.00 0.00 2.92
3060 6350 4.066490 TCATCATACGCATTGCATCATCA 58.934 39.130 9.69 0.00 0.00 3.07
3061 6351 4.698304 TCATCATACGCATTGCATCATCAT 59.302 37.500 9.69 0.00 0.00 2.45
3062 6352 4.413495 TCATACGCATTGCATCATCATG 57.587 40.909 9.69 2.77 0.00 3.07
3063 6353 3.816523 TCATACGCATTGCATCATCATGT 59.183 39.130 9.69 0.00 31.86 3.21
3064 6354 4.276431 TCATACGCATTGCATCATCATGTT 59.724 37.500 9.69 0.00 31.86 2.71
3065 6355 3.513680 ACGCATTGCATCATCATGTTT 57.486 38.095 9.69 0.00 31.86 2.83
3066 6356 3.852286 ACGCATTGCATCATCATGTTTT 58.148 36.364 9.69 0.00 31.86 2.43
3067 6357 4.996344 ACGCATTGCATCATCATGTTTTA 58.004 34.783 9.69 0.00 31.86 1.52
3068 6358 5.409211 ACGCATTGCATCATCATGTTTTAA 58.591 33.333 9.69 0.00 31.86 1.52
3069 6359 5.868258 ACGCATTGCATCATCATGTTTTAAA 59.132 32.000 9.69 0.00 31.86 1.52
3070 6360 6.368243 ACGCATTGCATCATCATGTTTTAAAA 59.632 30.769 9.69 0.00 31.86 1.52
3071 6361 7.095313 ACGCATTGCATCATCATGTTTTAAAAA 60.095 29.630 9.69 0.00 31.86 1.94
3072 6362 7.214821 CGCATTGCATCATCATGTTTTAAAAAC 59.785 33.333 9.69 0.00 31.86 2.43
3073 6363 8.231837 GCATTGCATCATCATGTTTTAAAAACT 58.768 29.630 3.15 0.00 31.86 2.66
3076 6366 7.574496 TGCATCATCATGTTTTAAAAACTTGC 58.426 30.769 1.31 4.95 31.86 4.01
3077 6367 7.226128 TGCATCATCATGTTTTAAAAACTTGCA 59.774 29.630 1.31 7.18 31.86 4.08
3078 6368 8.231837 GCATCATCATGTTTTAAAAACTTGCAT 58.768 29.630 1.31 0.00 31.86 3.96
3079 6369 9.749490 CATCATCATGTTTTAAAAACTTGCATC 57.251 29.630 1.31 0.00 0.00 3.91
3080 6370 8.309163 TCATCATGTTTTAAAAACTTGCATCC 57.691 30.769 1.31 0.00 0.00 3.51
3081 6371 6.761731 TCATGTTTTAAAAACTTGCATCCG 57.238 33.333 1.31 0.00 0.00 4.18
3082 6372 6.276847 TCATGTTTTAAAAACTTGCATCCGT 58.723 32.000 1.31 0.00 0.00 4.69
3083 6373 6.419413 TCATGTTTTAAAAACTTGCATCCGTC 59.581 34.615 1.31 0.00 0.00 4.79
3084 6374 5.651530 TGTTTTAAAAACTTGCATCCGTCA 58.348 33.333 1.31 0.00 0.00 4.35
3085 6375 5.746245 TGTTTTAAAAACTTGCATCCGTCAG 59.254 36.000 1.31 0.00 0.00 3.51
3086 6376 4.497473 TTAAAAACTTGCATCCGTCAGG 57.503 40.909 0.00 0.00 39.46 3.86
3087 6377 1.247567 AAAACTTGCATCCGTCAGGG 58.752 50.000 0.00 0.00 38.33 4.45
3088 6378 0.110486 AAACTTGCATCCGTCAGGGT 59.890 50.000 0.00 0.00 38.33 4.34
3089 6379 0.110486 AACTTGCATCCGTCAGGGTT 59.890 50.000 0.00 0.00 38.33 4.11
3090 6380 0.321653 ACTTGCATCCGTCAGGGTTC 60.322 55.000 0.00 0.00 38.33 3.62
3091 6381 0.036010 CTTGCATCCGTCAGGGTTCT 60.036 55.000 0.00 0.00 38.33 3.01
3092 6382 0.036388 TTGCATCCGTCAGGGTTCTC 60.036 55.000 0.00 0.00 38.33 2.87
3093 6383 1.153349 GCATCCGTCAGGGTTCTCC 60.153 63.158 0.00 0.00 38.33 3.71
3094 6384 1.141881 CATCCGTCAGGGTTCTCCG 59.858 63.158 0.00 0.00 41.52 4.63
3095 6385 1.000019 ATCCGTCAGGGTTCTCCGA 60.000 57.895 0.00 0.00 41.52 4.55
3096 6386 1.038130 ATCCGTCAGGGTTCTCCGAG 61.038 60.000 0.00 0.00 41.52 4.63
3097 6387 1.977544 CCGTCAGGGTTCTCCGAGT 60.978 63.158 0.00 0.00 41.52 4.18
3098 6388 1.533469 CCGTCAGGGTTCTCCGAGTT 61.533 60.000 0.00 0.00 41.52 3.01
3099 6389 0.109226 CGTCAGGGTTCTCCGAGTTC 60.109 60.000 0.00 0.00 41.52 3.01
3100 6390 1.258676 GTCAGGGTTCTCCGAGTTCT 58.741 55.000 0.00 0.00 41.52 3.01
3101 6391 1.202817 GTCAGGGTTCTCCGAGTTCTC 59.797 57.143 0.00 0.00 41.52 2.87
3102 6392 1.075698 TCAGGGTTCTCCGAGTTCTCT 59.924 52.381 0.00 0.00 41.52 3.10
3103 6393 1.474879 CAGGGTTCTCCGAGTTCTCTC 59.525 57.143 0.00 0.00 41.52 3.20
3104 6394 0.818938 GGGTTCTCCGAGTTCTCTCC 59.181 60.000 0.00 0.00 37.40 3.71
3105 6395 1.546961 GGTTCTCCGAGTTCTCTCCA 58.453 55.000 0.00 0.00 37.40 3.86
3106 6396 2.104170 GGTTCTCCGAGTTCTCTCCAT 58.896 52.381 0.00 0.00 37.40 3.41
3107 6397 2.498078 GGTTCTCCGAGTTCTCTCCATT 59.502 50.000 0.00 0.00 37.40 3.16
3108 6398 3.516615 GTTCTCCGAGTTCTCTCCATTG 58.483 50.000 0.00 0.00 37.40 2.82
3109 6399 2.808919 TCTCCGAGTTCTCTCCATTGT 58.191 47.619 0.00 0.00 37.40 2.71
3110 6400 2.755655 TCTCCGAGTTCTCTCCATTGTC 59.244 50.000 0.00 0.00 37.40 3.18
3111 6401 1.825474 TCCGAGTTCTCTCCATTGTCC 59.175 52.381 0.00 0.00 37.40 4.02
3112 6402 1.469940 CCGAGTTCTCTCCATTGTCCG 60.470 57.143 0.00 0.00 37.40 4.79
3113 6403 1.202582 CGAGTTCTCTCCATTGTCCGT 59.797 52.381 0.00 0.00 37.40 4.69
3114 6404 2.352814 CGAGTTCTCTCCATTGTCCGTT 60.353 50.000 0.00 0.00 37.40 4.44
3115 6405 3.254892 GAGTTCTCTCCATTGTCCGTTC 58.745 50.000 0.00 0.00 34.87 3.95
3116 6406 2.900546 AGTTCTCTCCATTGTCCGTTCT 59.099 45.455 0.00 0.00 0.00 3.01
3117 6407 2.996621 GTTCTCTCCATTGTCCGTTCTG 59.003 50.000 0.00 0.00 0.00 3.02
3118 6408 2.525368 TCTCTCCATTGTCCGTTCTGA 58.475 47.619 0.00 0.00 0.00 3.27
3119 6409 2.493675 TCTCTCCATTGTCCGTTCTGAG 59.506 50.000 0.00 0.00 0.00 3.35
3120 6410 1.066858 TCTCCATTGTCCGTTCTGAGC 60.067 52.381 0.00 0.00 0.00 4.26
3121 6411 0.036388 TCCATTGTCCGTTCTGAGCC 60.036 55.000 0.00 0.00 0.00 4.70
3122 6412 1.026718 CCATTGTCCGTTCTGAGCCC 61.027 60.000 0.00 0.00 0.00 5.19
3123 6413 0.321564 CATTGTCCGTTCTGAGCCCA 60.322 55.000 0.00 0.00 0.00 5.36
3124 6414 0.400213 ATTGTCCGTTCTGAGCCCAA 59.600 50.000 0.00 0.00 0.00 4.12
3125 6415 0.534203 TTGTCCGTTCTGAGCCCAAC 60.534 55.000 0.00 0.00 0.00 3.77
3126 6416 1.671379 GTCCGTTCTGAGCCCAACC 60.671 63.158 0.00 0.00 0.00 3.77
3127 6417 1.841556 TCCGTTCTGAGCCCAACCT 60.842 57.895 0.00 0.00 0.00 3.50
3128 6418 1.376037 CCGTTCTGAGCCCAACCTC 60.376 63.158 0.00 0.00 0.00 3.85
3129 6419 1.371183 CGTTCTGAGCCCAACCTCA 59.629 57.895 0.00 0.00 39.42 3.86
3130 6420 0.951040 CGTTCTGAGCCCAACCTCAC 60.951 60.000 0.00 0.00 36.96 3.51
3131 6421 0.398318 GTTCTGAGCCCAACCTCACT 59.602 55.000 0.00 0.00 36.96 3.41
3132 6422 1.140312 TTCTGAGCCCAACCTCACTT 58.860 50.000 0.00 0.00 36.96 3.16
3133 6423 0.397941 TCTGAGCCCAACCTCACTTG 59.602 55.000 0.00 0.00 36.96 3.16
3134 6424 1.228245 TGAGCCCAACCTCACTTGC 60.228 57.895 0.00 0.00 36.96 4.01
3135 6425 1.228245 GAGCCCAACCTCACTTGCA 60.228 57.895 0.00 0.00 0.00 4.08
3136 6426 1.518903 GAGCCCAACCTCACTTGCAC 61.519 60.000 0.00 0.00 0.00 4.57
3137 6427 2.908073 GCCCAACCTCACTTGCACG 61.908 63.158 0.00 0.00 0.00 5.34
3138 6428 2.639286 CCAACCTCACTTGCACGC 59.361 61.111 0.00 0.00 0.00 5.34
3139 6429 2.249309 CAACCTCACTTGCACGCG 59.751 61.111 3.53 3.53 0.00 6.01
3140 6430 3.649986 AACCTCACTTGCACGCGC 61.650 61.111 5.73 0.00 39.24 6.86
3178 6468 9.840427 CTGAAATATTATTTTATAAGTGGCCGG 57.160 33.333 0.00 0.00 0.00 6.13
3179 6469 9.575868 TGAAATATTATTTTATAAGTGGCCGGA 57.424 29.630 5.05 0.00 0.00 5.14
3185 6475 5.986501 TTTTATAAGTGGCCGGAAAATGT 57.013 34.783 5.05 0.00 0.00 2.71
3186 6476 5.986501 TTTATAAGTGGCCGGAAAATGTT 57.013 34.783 5.05 0.00 0.00 2.71
3187 6477 5.570234 TTATAAGTGGCCGGAAAATGTTC 57.430 39.130 5.05 0.00 0.00 3.18
3188 6478 1.995376 AAGTGGCCGGAAAATGTTCT 58.005 45.000 5.05 0.00 33.92 3.01
3189 6479 1.534729 AGTGGCCGGAAAATGTTCTC 58.465 50.000 5.05 0.00 33.92 2.87
3190 6480 0.168128 GTGGCCGGAAAATGTTCTCG 59.832 55.000 5.05 0.00 33.92 4.04
3191 6481 0.958382 TGGCCGGAAAATGTTCTCGG 60.958 55.000 5.05 16.80 44.15 4.63
3192 6482 0.675522 GGCCGGAAAATGTTCTCGGA 60.676 55.000 22.42 0.00 44.11 4.55
3193 6483 1.161843 GCCGGAAAATGTTCTCGGAA 58.838 50.000 22.42 0.00 44.11 4.30
3194 6484 1.743394 GCCGGAAAATGTTCTCGGAAT 59.257 47.619 22.42 0.00 44.11 3.01
3195 6485 2.477863 GCCGGAAAATGTTCTCGGAATG 60.478 50.000 22.42 3.99 44.11 2.67
3196 6486 2.097466 CCGGAAAATGTTCTCGGAATGG 59.903 50.000 16.35 0.00 44.11 3.16
3197 6487 2.097466 CGGAAAATGTTCTCGGAATGGG 59.903 50.000 0.00 0.00 33.92 4.00
3198 6488 3.089284 GGAAAATGTTCTCGGAATGGGT 58.911 45.455 0.00 0.00 33.92 4.51
3199 6489 3.509967 GGAAAATGTTCTCGGAATGGGTT 59.490 43.478 0.00 0.00 33.92 4.11
3200 6490 4.485163 GAAAATGTTCTCGGAATGGGTTG 58.515 43.478 0.00 0.00 0.00 3.77
3201 6491 3.433306 AATGTTCTCGGAATGGGTTGA 57.567 42.857 0.00 0.00 0.00 3.18
3202 6492 2.940994 TGTTCTCGGAATGGGTTGAA 57.059 45.000 0.00 0.00 0.00 2.69
3203 6493 3.216187 TGTTCTCGGAATGGGTTGAAA 57.784 42.857 0.00 0.00 0.00 2.69
3204 6494 3.146066 TGTTCTCGGAATGGGTTGAAAG 58.854 45.455 0.00 0.00 0.00 2.62
3205 6495 3.146847 GTTCTCGGAATGGGTTGAAAGT 58.853 45.455 0.00 0.00 0.00 2.66
3206 6496 3.502123 TCTCGGAATGGGTTGAAAGTT 57.498 42.857 0.00 0.00 0.00 2.66
3207 6497 3.146066 TCTCGGAATGGGTTGAAAGTTG 58.854 45.455 0.00 0.00 0.00 3.16
3208 6498 2.228822 CTCGGAATGGGTTGAAAGTTGG 59.771 50.000 0.00 0.00 0.00 3.77
3209 6499 1.336795 CGGAATGGGTTGAAAGTTGGC 60.337 52.381 0.00 0.00 0.00 4.52
3210 6500 1.336795 GGAATGGGTTGAAAGTTGGCG 60.337 52.381 0.00 0.00 0.00 5.69
3211 6501 1.339929 GAATGGGTTGAAAGTTGGCGT 59.660 47.619 0.00 0.00 0.00 5.68
3212 6502 0.673437 ATGGGTTGAAAGTTGGCGTG 59.327 50.000 0.00 0.00 0.00 5.34
3213 6503 0.681564 TGGGTTGAAAGTTGGCGTGT 60.682 50.000 0.00 0.00 0.00 4.49
3214 6504 0.248866 GGGTTGAAAGTTGGCGTGTG 60.249 55.000 0.00 0.00 0.00 3.82
3215 6505 0.248866 GGTTGAAAGTTGGCGTGTGG 60.249 55.000 0.00 0.00 0.00 4.17
3216 6506 0.454196 GTTGAAAGTTGGCGTGTGGT 59.546 50.000 0.00 0.00 0.00 4.16
3217 6507 0.736053 TTGAAAGTTGGCGTGTGGTC 59.264 50.000 0.00 0.00 0.00 4.02
3218 6508 0.107410 TGAAAGTTGGCGTGTGGTCT 60.107 50.000 0.00 0.00 0.00 3.85
3219 6509 1.021968 GAAAGTTGGCGTGTGGTCTT 58.978 50.000 0.00 0.00 0.00 3.01
3220 6510 0.738389 AAAGTTGGCGTGTGGTCTTG 59.262 50.000 0.00 0.00 0.00 3.02
3221 6511 0.393808 AAGTTGGCGTGTGGTCTTGT 60.394 50.000 0.00 0.00 0.00 3.16
3222 6512 0.393808 AGTTGGCGTGTGGTCTTGTT 60.394 50.000 0.00 0.00 0.00 2.83
3223 6513 0.454196 GTTGGCGTGTGGTCTTGTTT 59.546 50.000 0.00 0.00 0.00 2.83
3224 6514 1.135228 GTTGGCGTGTGGTCTTGTTTT 60.135 47.619 0.00 0.00 0.00 2.43
3225 6515 2.039818 TGGCGTGTGGTCTTGTTTTA 57.960 45.000 0.00 0.00 0.00 1.52
3226 6516 1.944024 TGGCGTGTGGTCTTGTTTTAG 59.056 47.619 0.00 0.00 0.00 1.85
3227 6517 1.944709 GGCGTGTGGTCTTGTTTTAGT 59.055 47.619 0.00 0.00 0.00 2.24
3228 6518 2.286772 GGCGTGTGGTCTTGTTTTAGTG 60.287 50.000 0.00 0.00 0.00 2.74
3229 6519 2.353579 GCGTGTGGTCTTGTTTTAGTGT 59.646 45.455 0.00 0.00 0.00 3.55
3230 6520 3.556775 GCGTGTGGTCTTGTTTTAGTGTA 59.443 43.478 0.00 0.00 0.00 2.90
3231 6521 4.318546 GCGTGTGGTCTTGTTTTAGTGTAG 60.319 45.833 0.00 0.00 0.00 2.74
3232 6522 5.045215 CGTGTGGTCTTGTTTTAGTGTAGA 58.955 41.667 0.00 0.00 0.00 2.59
3233 6523 5.694910 CGTGTGGTCTTGTTTTAGTGTAGAT 59.305 40.000 0.00 0.00 0.00 1.98
3234 6524 6.864685 CGTGTGGTCTTGTTTTAGTGTAGATA 59.135 38.462 0.00 0.00 0.00 1.98
3235 6525 7.061905 CGTGTGGTCTTGTTTTAGTGTAGATAG 59.938 40.741 0.00 0.00 0.00 2.08
3236 6526 8.086522 GTGTGGTCTTGTTTTAGTGTAGATAGA 58.913 37.037 0.00 0.00 0.00 1.98
3237 6527 8.086522 TGTGGTCTTGTTTTAGTGTAGATAGAC 58.913 37.037 0.00 0.00 0.00 2.59
3238 6528 7.544915 GTGGTCTTGTTTTAGTGTAGATAGACC 59.455 40.741 0.00 0.00 45.83 3.85
3239 6529 6.750963 GGTCTTGTTTTAGTGTAGATAGACCG 59.249 42.308 0.00 0.00 39.59 4.79
3240 6530 6.253083 GTCTTGTTTTAGTGTAGATAGACCGC 59.747 42.308 0.00 0.00 0.00 5.68
3241 6531 5.002464 TGTTTTAGTGTAGATAGACCGCC 57.998 43.478 0.00 0.00 0.00 6.13
3242 6532 4.708421 TGTTTTAGTGTAGATAGACCGCCT 59.292 41.667 0.00 0.00 0.00 5.52
3243 6533 4.913335 TTTAGTGTAGATAGACCGCCTG 57.087 45.455 0.00 0.00 0.00 4.85
3244 6534 2.438800 AGTGTAGATAGACCGCCTGT 57.561 50.000 0.00 0.00 0.00 4.00
3245 6535 2.299521 AGTGTAGATAGACCGCCTGTC 58.700 52.381 0.00 0.00 44.82 3.51
3255 6545 3.575965 GACCGCCTGTCAAATTTCATT 57.424 42.857 0.00 0.00 43.85 2.57
3256 6546 3.244976 GACCGCCTGTCAAATTTCATTG 58.755 45.455 0.00 0.00 43.85 2.82
3257 6547 1.994779 CCGCCTGTCAAATTTCATTGC 59.005 47.619 0.00 0.00 0.00 3.56
3258 6548 2.609984 CCGCCTGTCAAATTTCATTGCA 60.610 45.455 0.00 0.00 0.00 4.08
3259 6549 3.255725 CGCCTGTCAAATTTCATTGCAT 58.744 40.909 0.00 0.00 0.00 3.96
3260 6550 3.680937 CGCCTGTCAAATTTCATTGCATT 59.319 39.130 0.00 0.00 0.00 3.56
3261 6551 4.201647 CGCCTGTCAAATTTCATTGCATTC 60.202 41.667 0.00 0.00 0.00 2.67
3262 6552 4.201647 GCCTGTCAAATTTCATTGCATTCG 60.202 41.667 0.00 0.00 0.00 3.34
3263 6553 4.327898 CCTGTCAAATTTCATTGCATTCGG 59.672 41.667 0.00 0.00 0.00 4.30
3264 6554 5.131594 TGTCAAATTTCATTGCATTCGGA 57.868 34.783 0.00 0.00 0.00 4.55
3265 6555 5.162794 TGTCAAATTTCATTGCATTCGGAG 58.837 37.500 0.00 0.00 0.00 4.63
3266 6556 5.163513 GTCAAATTTCATTGCATTCGGAGT 58.836 37.500 0.00 0.00 0.00 3.85
3267 6557 5.634859 GTCAAATTTCATTGCATTCGGAGTT 59.365 36.000 0.00 0.00 0.00 3.01
3268 6558 5.863397 TCAAATTTCATTGCATTCGGAGTTC 59.137 36.000 0.00 0.00 0.00 3.01
3269 6559 3.469899 TTTCATTGCATTCGGAGTTCG 57.530 42.857 0.00 0.00 40.90 3.95
3270 6560 2.093306 TCATTGCATTCGGAGTTCGT 57.907 45.000 0.00 0.00 40.32 3.85
3271 6561 2.422597 TCATTGCATTCGGAGTTCGTT 58.577 42.857 0.00 0.00 40.32 3.85
3272 6562 2.811431 TCATTGCATTCGGAGTTCGTTT 59.189 40.909 0.00 0.00 40.32 3.60
3273 6563 2.679355 TTGCATTCGGAGTTCGTTTG 57.321 45.000 0.00 0.00 40.32 2.93
3274 6564 1.872388 TGCATTCGGAGTTCGTTTGA 58.128 45.000 0.00 0.00 40.32 2.69
3275 6565 2.422597 TGCATTCGGAGTTCGTTTGAT 58.577 42.857 0.00 0.00 40.32 2.57
3276 6566 3.591023 TGCATTCGGAGTTCGTTTGATA 58.409 40.909 0.00 0.00 40.32 2.15
3277 6567 3.616821 TGCATTCGGAGTTCGTTTGATAG 59.383 43.478 0.00 0.00 40.32 2.08
3278 6568 3.617263 GCATTCGGAGTTCGTTTGATAGT 59.383 43.478 0.00 0.00 40.32 2.12
3279 6569 4.259850 GCATTCGGAGTTCGTTTGATAGTC 60.260 45.833 0.00 0.00 40.32 2.59
3280 6570 4.778534 TTCGGAGTTCGTTTGATAGTCT 57.221 40.909 0.00 0.00 40.32 3.24
3281 6571 5.885230 TTCGGAGTTCGTTTGATAGTCTA 57.115 39.130 0.00 0.00 40.32 2.59
3282 6572 5.885230 TCGGAGTTCGTTTGATAGTCTAA 57.115 39.130 0.00 0.00 40.32 2.10
3283 6573 5.634896 TCGGAGTTCGTTTGATAGTCTAAC 58.365 41.667 0.00 0.00 40.32 2.34
3284 6574 4.797349 CGGAGTTCGTTTGATAGTCTAACC 59.203 45.833 0.00 0.00 30.25 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
367 411 0.887933 CCCCTCAACCAATTCAACCG 59.112 55.000 0.00 0.00 0.00 4.44
408 453 5.068987 CACAAGAAAGGGGATTTGAACTCAA 59.931 40.000 0.00 0.00 0.00 3.02
450 495 4.714632 TCGTGATTTTCTGGAGGAGTTTT 58.285 39.130 0.00 0.00 0.00 2.43
551 782 2.379972 CTAATCCGTGAGACCTGGTCT 58.620 52.381 28.70 28.70 46.42 3.85
552 783 1.202428 GCTAATCCGTGAGACCTGGTC 60.202 57.143 19.20 19.20 0.00 4.02
553 784 0.824759 GCTAATCCGTGAGACCTGGT 59.175 55.000 0.00 0.00 0.00 4.00
554 785 0.824109 TGCTAATCCGTGAGACCTGG 59.176 55.000 0.00 0.00 0.00 4.45
555 786 1.202463 CCTGCTAATCCGTGAGACCTG 60.202 57.143 0.00 0.00 0.00 4.00
556 787 1.115467 CCTGCTAATCCGTGAGACCT 58.885 55.000 0.00 0.00 0.00 3.85
557 788 0.824759 ACCTGCTAATCCGTGAGACC 59.175 55.000 0.00 0.00 0.00 3.85
558 789 1.476891 TCACCTGCTAATCCGTGAGAC 59.523 52.381 0.00 0.00 31.80 3.36
559 790 1.847328 TCACCTGCTAATCCGTGAGA 58.153 50.000 0.00 0.00 31.80 3.27
560 791 2.215907 CTCACCTGCTAATCCGTGAG 57.784 55.000 2.01 2.01 44.38 3.51
561 792 1.476891 GTCTCACCTGCTAATCCGTGA 59.523 52.381 0.00 0.00 34.26 4.35
562 793 1.471676 GGTCTCACCTGCTAATCCGTG 60.472 57.143 0.00 0.00 34.73 4.94
563 794 0.824759 GGTCTCACCTGCTAATCCGT 59.175 55.000 0.00 0.00 34.73 4.69
564 795 0.105039 GGGTCTCACCTGCTAATCCG 59.895 60.000 0.00 0.00 38.64 4.18
565 796 1.204146 TGGGTCTCACCTGCTAATCC 58.796 55.000 0.00 0.00 38.64 3.01
566 797 3.135530 AGAATGGGTCTCACCTGCTAATC 59.864 47.826 0.00 0.00 38.64 1.75
567 798 3.118112 CAGAATGGGTCTCACCTGCTAAT 60.118 47.826 0.00 0.00 38.64 1.73
568 799 2.237143 CAGAATGGGTCTCACCTGCTAA 59.763 50.000 0.00 0.00 38.64 3.09
569 800 1.833630 CAGAATGGGTCTCACCTGCTA 59.166 52.381 0.00 0.00 38.64 3.49
570 801 0.617413 CAGAATGGGTCTCACCTGCT 59.383 55.000 0.00 0.00 38.64 4.24
571 802 0.615331 TCAGAATGGGTCTCACCTGC 59.385 55.000 0.22 0.00 38.64 4.85
572 803 2.915349 CATCAGAATGGGTCTCACCTG 58.085 52.381 0.00 0.00 38.64 4.00
573 804 3.893100 ATCCATCAGAATGGGTCTCACCT 60.893 47.826 4.68 0.00 43.29 4.00
574 805 2.441001 ATCCATCAGAATGGGTCTCACC 59.559 50.000 4.68 0.00 43.29 4.02
575 806 3.135348 TCATCCATCAGAATGGGTCTCAC 59.865 47.826 4.68 0.00 43.29 3.51
576 807 3.135348 GTCATCCATCAGAATGGGTCTCA 59.865 47.826 4.68 0.00 43.29 3.27
577 808 3.135348 TGTCATCCATCAGAATGGGTCTC 59.865 47.826 4.68 0.00 43.29 3.36
578 809 3.117745 TGTCATCCATCAGAATGGGTCT 58.882 45.455 4.68 0.00 43.29 3.85
579 810 3.209410 GTGTCATCCATCAGAATGGGTC 58.791 50.000 4.68 0.00 43.29 4.46
583 814 2.610833 CCACGTGTCATCCATCAGAATG 59.389 50.000 15.65 0.00 37.54 2.67
584 815 2.910199 CCACGTGTCATCCATCAGAAT 58.090 47.619 15.65 0.00 0.00 2.40
585 816 1.675714 GCCACGTGTCATCCATCAGAA 60.676 52.381 15.65 0.00 0.00 3.02
586 817 0.108186 GCCACGTGTCATCCATCAGA 60.108 55.000 15.65 0.00 0.00 3.27
587 818 0.391528 TGCCACGTGTCATCCATCAG 60.392 55.000 15.65 0.00 0.00 2.90
588 819 0.252761 ATGCCACGTGTCATCCATCA 59.747 50.000 15.65 0.00 0.00 3.07
589 820 1.331756 GAATGCCACGTGTCATCCATC 59.668 52.381 13.12 3.25 0.00 3.51
590 821 1.339920 TGAATGCCACGTGTCATCCAT 60.340 47.619 13.12 0.00 0.00 3.41
591 822 0.036022 TGAATGCCACGTGTCATCCA 59.964 50.000 13.12 2.86 0.00 3.41
592 823 0.447801 GTGAATGCCACGTGTCATCC 59.552 55.000 13.12 0.00 35.86 3.51
593 824 3.975992 GTGAATGCCACGTGTCATC 57.024 52.632 13.12 7.23 35.86 2.92
601 832 3.184986 GCTTTGTGATTTGTGAATGCCAC 59.815 43.478 0.00 0.00 45.88 5.01
602 833 3.181468 TGCTTTGTGATTTGTGAATGCCA 60.181 39.130 0.00 0.00 0.00 4.92
603 834 3.391965 TGCTTTGTGATTTGTGAATGCC 58.608 40.909 0.00 0.00 0.00 4.40
604 835 4.092383 GGATGCTTTGTGATTTGTGAATGC 59.908 41.667 0.00 0.00 0.00 3.56
605 836 5.119588 GTGGATGCTTTGTGATTTGTGAATG 59.880 40.000 0.00 0.00 0.00 2.67
606 837 5.232463 GTGGATGCTTTGTGATTTGTGAAT 58.768 37.500 0.00 0.00 0.00 2.57
607 838 4.501229 GGTGGATGCTTTGTGATTTGTGAA 60.501 41.667 0.00 0.00 0.00 3.18
608 839 3.005684 GGTGGATGCTTTGTGATTTGTGA 59.994 43.478 0.00 0.00 0.00 3.58
609 840 3.319755 GGTGGATGCTTTGTGATTTGTG 58.680 45.455 0.00 0.00 0.00 3.33
610 841 2.299867 GGGTGGATGCTTTGTGATTTGT 59.700 45.455 0.00 0.00 0.00 2.83
611 842 2.354003 GGGGTGGATGCTTTGTGATTTG 60.354 50.000 0.00 0.00 0.00 2.32
612 843 1.901833 GGGGTGGATGCTTTGTGATTT 59.098 47.619 0.00 0.00 0.00 2.17
613 844 1.203162 TGGGGTGGATGCTTTGTGATT 60.203 47.619 0.00 0.00 0.00 2.57
614 845 0.409092 TGGGGTGGATGCTTTGTGAT 59.591 50.000 0.00 0.00 0.00 3.06
615 846 0.539438 GTGGGGTGGATGCTTTGTGA 60.539 55.000 0.00 0.00 0.00 3.58
616 847 0.827089 TGTGGGGTGGATGCTTTGTG 60.827 55.000 0.00 0.00 0.00 3.33
617 848 0.540365 CTGTGGGGTGGATGCTTTGT 60.540 55.000 0.00 0.00 0.00 2.83
618 849 1.252904 CCTGTGGGGTGGATGCTTTG 61.253 60.000 0.00 0.00 0.00 2.77
619 850 1.077265 CCTGTGGGGTGGATGCTTT 59.923 57.895 0.00 0.00 0.00 3.51
620 851 2.765969 CCTGTGGGGTGGATGCTT 59.234 61.111 0.00 0.00 0.00 3.91
631 862 4.394712 GTGAGACCCGCCCTGTGG 62.395 72.222 0.00 0.00 0.00 4.17
632 863 4.394712 GGTGAGACCCGCCCTGTG 62.395 72.222 0.00 0.00 39.55 3.66
633 864 4.640690 AGGTGAGACCCGCCCTGT 62.641 66.667 0.00 0.00 46.65 4.00
634 865 4.087892 CAGGTGAGACCCGCCCTG 62.088 72.222 0.00 0.00 46.65 4.45
635 866 3.625632 ATCAGGTGAGACCCGCCCT 62.626 63.158 0.00 0.00 46.65 5.19
636 867 2.198304 AAATCAGGTGAGACCCGCCC 62.198 60.000 0.00 0.00 46.65 6.13
637 868 0.539986 TAAATCAGGTGAGACCCGCC 59.460 55.000 0.00 0.00 45.81 6.13
638 869 2.622064 ATAAATCAGGTGAGACCCGC 57.378 50.000 0.00 0.00 39.75 6.13
639 870 5.243954 TCTCATATAAATCAGGTGAGACCCG 59.756 44.000 0.00 0.00 40.06 5.28
640 871 6.672266 TCTCATATAAATCAGGTGAGACCC 57.328 41.667 0.00 0.00 40.06 4.46
643 874 6.268617 CCAGGTCTCATATAAATCAGGTGAGA 59.731 42.308 0.00 0.00 41.99 3.27
644 875 6.042552 ACCAGGTCTCATATAAATCAGGTGAG 59.957 42.308 0.00 0.00 38.07 3.51
645 876 5.905331 ACCAGGTCTCATATAAATCAGGTGA 59.095 40.000 0.00 0.00 0.00 4.02
646 877 6.042552 AGACCAGGTCTCATATAAATCAGGTG 59.957 42.308 17.31 0.00 38.71 4.00
647 878 6.146760 AGACCAGGTCTCATATAAATCAGGT 58.853 40.000 17.31 0.00 38.71 4.00
648 879 6.678568 AGACCAGGTCTCATATAAATCAGG 57.321 41.667 17.31 0.00 38.71 3.86
682 913 1.279558 TGGATCCCGATCGTGGAAAAA 59.720 47.619 23.34 12.35 38.69 1.94
683 914 0.906066 TGGATCCCGATCGTGGAAAA 59.094 50.000 23.34 12.62 38.69 2.29
684 915 1.070134 GATGGATCCCGATCGTGGAAA 59.930 52.381 23.34 14.97 38.69 3.13
685 916 0.679505 GATGGATCCCGATCGTGGAA 59.320 55.000 23.34 11.87 38.69 3.53
686 917 1.185618 GGATGGATCCCGATCGTGGA 61.186 60.000 22.25 22.25 41.20 4.02
687 918 1.293498 GGATGGATCCCGATCGTGG 59.707 63.158 15.09 14.68 41.20 4.94
688 919 4.996976 GGATGGATCCCGATCGTG 57.003 61.111 15.09 1.95 41.20 4.35
695 926 7.351232 TCCTTTTTGAAGGAGGATGGATCCC 62.351 48.000 9.90 0.00 43.68 3.85
711 942 7.569226 CGCTGTCCATATTTTGTTTCCTTTTTG 60.569 37.037 0.00 0.00 0.00 2.44
755 986 2.958355 CCTCATTTGCGGGAATAATGGT 59.042 45.455 0.00 0.00 31.74 3.55
773 1004 5.784177 TGTCGCTTTAATAGGATGATCCTC 58.216 41.667 18.93 0.30 45.66 3.71
777 1008 6.294176 GGCAATTGTCGCTTTAATAGGATGAT 60.294 38.462 7.40 0.00 0.00 2.45
778 1009 5.008613 GGCAATTGTCGCTTTAATAGGATGA 59.991 40.000 7.40 0.00 0.00 2.92
779 1010 5.215160 GGCAATTGTCGCTTTAATAGGATG 58.785 41.667 7.40 0.00 0.00 3.51
850 1081 2.580589 CCGTAATTTTGCAACAGGTCG 58.419 47.619 0.00 2.05 0.00 4.79
902 1137 7.397761 ACCGGTGGGAATATGAAGAAATTTTTA 59.602 33.333 6.12 0.00 36.97 1.52
907 1142 4.519906 ACCGGTGGGAATATGAAGAAAT 57.480 40.909 6.12 0.00 36.97 2.17
912 1147 1.069513 CGCTACCGGTGGGAATATGAA 59.930 52.381 19.93 0.00 36.97 2.57
913 1148 0.677288 CGCTACCGGTGGGAATATGA 59.323 55.000 19.93 0.00 36.97 2.15
916 1151 0.461135 GAACGCTACCGGTGGGAATA 59.539 55.000 19.93 0.00 39.22 1.75
926 1161 0.317938 AGCATCGATCGAACGCTACC 60.318 55.000 32.10 13.58 35.90 3.18
992 1227 1.690219 GCTGGACGATGGGATCTGGT 61.690 60.000 0.00 0.00 0.00 4.00
1006 1241 0.611714 GTTACGGAAAGGGAGCTGGA 59.388 55.000 0.00 0.00 0.00 3.86
1014 1253 0.320073 TGGTCGCTGTTACGGAAAGG 60.320 55.000 0.00 0.00 0.00 3.11
1033 1272 0.106918 TTCTGGTCCGTTTGTTGGCT 60.107 50.000 0.00 0.00 0.00 4.75
1065 1308 2.185350 CGCCACGATTCTGGAGCT 59.815 61.111 0.00 0.00 32.30 4.09
1079 1322 3.499737 CCCACAGCAATCGTCGCC 61.500 66.667 0.00 0.00 0.00 5.54
1126 1369 1.067821 GATCGGGAACTGGTAGAGCAG 59.932 57.143 7.18 7.18 33.92 4.24
1156 1405 3.428282 CTTTGTGTACGGGGCGCC 61.428 66.667 21.18 21.18 0.00 6.53
1452 1716 2.027625 GGCGGTGTGGACGAAGAAG 61.028 63.158 0.00 0.00 0.00 2.85
2249 3888 7.117812 ACCAGTCTTACGAACTTCATACAAATG 59.882 37.037 0.00 0.00 0.00 2.32
2265 3904 6.049790 GGGAGTATTCATCAACCAGTCTTAC 58.950 44.000 0.00 0.00 0.00 2.34
2272 3911 2.434336 CGGAGGGAGTATTCATCAACCA 59.566 50.000 0.00 0.00 0.00 3.67
2297 3936 1.135603 GCAGCTGCGACATGAATTTCA 60.136 47.619 25.23 0.75 0.00 2.69
2315 3954 4.282957 TGAGGAGTAAATTGCAAAATGGCA 59.717 37.500 1.71 0.00 43.19 4.92
2366 4005 3.321111 AGGAAGAAAGCGACTACACAGAA 59.679 43.478 0.00 0.00 0.00 3.02
2473 4670 2.454941 GGGGAGGGAGAGGAACCA 59.545 66.667 0.00 0.00 0.00 3.67
2536 5485 1.219124 GCAGAGGGACATGCGAGAA 59.781 57.895 0.00 0.00 31.87 2.87
2949 6239 3.770040 CGGTCTCGGGGCATCACA 61.770 66.667 0.00 0.00 0.00 3.58
2950 6240 2.797278 ATCGGTCTCGGGGCATCAC 61.797 63.158 0.00 0.00 36.95 3.06
2951 6241 2.443952 ATCGGTCTCGGGGCATCA 60.444 61.111 0.00 0.00 36.95 3.07
2952 6242 2.029666 CATCGGTCTCGGGGCATC 59.970 66.667 0.00 0.00 36.95 3.91
2953 6243 2.764128 ACATCGGTCTCGGGGCAT 60.764 61.111 0.00 0.00 36.95 4.40
2954 6244 3.770040 CACATCGGTCTCGGGGCA 61.770 66.667 0.00 0.00 36.95 5.36
2956 6246 4.530857 GGCACATCGGTCTCGGGG 62.531 72.222 0.00 0.00 36.95 5.73
2957 6247 3.723235 CTGGCACATCGGTCTCGGG 62.723 68.421 0.00 0.00 38.20 5.14
2958 6248 2.202797 CTGGCACATCGGTCTCGG 60.203 66.667 0.00 0.00 38.20 4.63
2959 6249 2.202797 CCTGGCACATCGGTCTCG 60.203 66.667 0.00 0.00 38.20 4.04
2960 6250 1.448540 CACCTGGCACATCGGTCTC 60.449 63.158 0.00 0.00 38.20 3.36
2961 6251 2.172483 GACACCTGGCACATCGGTCT 62.172 60.000 0.00 0.00 38.20 3.85
2962 6252 1.741770 GACACCTGGCACATCGGTC 60.742 63.158 0.00 0.00 38.20 4.79
2963 6253 2.347490 GACACCTGGCACATCGGT 59.653 61.111 0.00 0.00 38.20 4.69
2964 6254 2.436646 GGACACCTGGCACATCGG 60.437 66.667 0.00 0.00 38.20 4.18
2965 6255 1.448540 GAGGACACCTGGCACATCG 60.449 63.158 0.00 0.00 38.20 3.84
2966 6256 1.078143 GGAGGACACCTGGCACATC 60.078 63.158 0.00 0.00 38.20 3.06
2967 6257 1.845627 CTGGAGGACACCTGGCACAT 61.846 60.000 0.00 0.00 38.20 3.21
2968 6258 2.447572 TGGAGGACACCTGGCACA 60.448 61.111 0.00 0.00 31.76 4.57
2969 6259 2.056906 AACTGGAGGACACCTGGCAC 62.057 60.000 0.00 0.00 31.76 5.01
2970 6260 0.472925 TAACTGGAGGACACCTGGCA 60.473 55.000 0.00 0.00 31.76 4.92
2971 6261 0.912486 ATAACTGGAGGACACCTGGC 59.088 55.000 0.00 0.00 31.76 4.85
2972 6262 2.418746 CGAATAACTGGAGGACACCTGG 60.419 54.545 0.00 0.00 31.76 4.45
2973 6263 2.233922 ACGAATAACTGGAGGACACCTG 59.766 50.000 0.00 0.00 31.76 4.00
2974 6264 2.537143 ACGAATAACTGGAGGACACCT 58.463 47.619 0.00 0.00 36.03 4.00
2975 6265 3.000727 CAACGAATAACTGGAGGACACC 58.999 50.000 0.00 0.00 0.00 4.16
2976 6266 3.660865 ACAACGAATAACTGGAGGACAC 58.339 45.455 0.00 0.00 0.00 3.67
2977 6267 4.062293 CAACAACGAATAACTGGAGGACA 58.938 43.478 0.00 0.00 0.00 4.02
2978 6268 4.062991 ACAACAACGAATAACTGGAGGAC 58.937 43.478 0.00 0.00 0.00 3.85
2979 6269 4.345859 ACAACAACGAATAACTGGAGGA 57.654 40.909 0.00 0.00 0.00 3.71
2980 6270 4.783242 CAACAACAACGAATAACTGGAGG 58.217 43.478 0.00 0.00 0.00 4.30
2981 6271 4.219033 GCAACAACAACGAATAACTGGAG 58.781 43.478 0.00 0.00 0.00 3.86
2982 6272 3.003897 GGCAACAACAACGAATAACTGGA 59.996 43.478 0.00 0.00 0.00 3.86
2983 6273 3.004315 AGGCAACAACAACGAATAACTGG 59.996 43.478 0.00 0.00 41.41 4.00
2984 6274 4.223320 AGGCAACAACAACGAATAACTG 57.777 40.909 0.00 0.00 41.41 3.16
2985 6275 4.097286 ACAAGGCAACAACAACGAATAACT 59.903 37.500 0.00 0.00 41.41 2.24
2986 6276 4.356289 ACAAGGCAACAACAACGAATAAC 58.644 39.130 0.00 0.00 41.41 1.89
2987 6277 4.336993 AGACAAGGCAACAACAACGAATAA 59.663 37.500 0.00 0.00 41.41 1.40
2988 6278 3.880490 AGACAAGGCAACAACAACGAATA 59.120 39.130 0.00 0.00 41.41 1.75
2989 6279 2.687935 AGACAAGGCAACAACAACGAAT 59.312 40.909 0.00 0.00 41.41 3.34
2990 6280 2.088423 AGACAAGGCAACAACAACGAA 58.912 42.857 0.00 0.00 41.41 3.85
2991 6281 1.745232 AGACAAGGCAACAACAACGA 58.255 45.000 0.00 0.00 41.41 3.85
2992 6282 2.559998 AAGACAAGGCAACAACAACG 57.440 45.000 0.00 0.00 41.41 4.10
2993 6283 3.181521 GCAAAAGACAAGGCAACAACAAC 60.182 43.478 0.00 0.00 41.41 3.32
2994 6284 2.999355 GCAAAAGACAAGGCAACAACAA 59.001 40.909 0.00 0.00 41.41 2.83
2995 6285 2.233431 AGCAAAAGACAAGGCAACAACA 59.767 40.909 0.00 0.00 41.41 3.33
2996 6286 2.860136 GAGCAAAAGACAAGGCAACAAC 59.140 45.455 0.00 0.00 41.41 3.32
2997 6287 2.479389 CGAGCAAAAGACAAGGCAACAA 60.479 45.455 0.00 0.00 41.41 2.83
2998 6288 1.065401 CGAGCAAAAGACAAGGCAACA 59.935 47.619 0.00 0.00 41.41 3.33
2999 6289 1.758783 CGAGCAAAAGACAAGGCAAC 58.241 50.000 0.00 0.00 0.00 4.17
3000 6290 0.030638 GCGAGCAAAAGACAAGGCAA 59.969 50.000 0.00 0.00 0.00 4.52
3001 6291 1.654220 GCGAGCAAAAGACAAGGCA 59.346 52.632 0.00 0.00 0.00 4.75
3002 6292 1.441016 CGCGAGCAAAAGACAAGGC 60.441 57.895 0.00 0.00 0.00 4.35
3003 6293 0.384725 CACGCGAGCAAAAGACAAGG 60.385 55.000 15.93 0.00 0.00 3.61
3004 6294 0.304705 ACACGCGAGCAAAAGACAAG 59.695 50.000 15.93 0.00 0.00 3.16
3005 6295 0.303493 GACACGCGAGCAAAAGACAA 59.697 50.000 15.93 0.00 0.00 3.18
3006 6296 1.817217 CGACACGCGAGCAAAAGACA 61.817 55.000 15.93 0.00 44.57 3.41
3007 6297 1.154836 CGACACGCGAGCAAAAGAC 60.155 57.895 15.93 0.00 44.57 3.01
3008 6298 2.938823 GCGACACGCGAGCAAAAGA 61.939 57.895 15.93 0.00 44.55 2.52
3009 6299 2.497628 GCGACACGCGAGCAAAAG 60.498 61.111 15.93 0.00 44.55 2.27
3019 6309 1.061411 CATGGCAAGATGCGACACG 59.939 57.895 0.00 0.00 46.21 4.49
3020 6310 0.097674 GACATGGCAAGATGCGACAC 59.902 55.000 0.00 0.00 46.21 3.67
3021 6311 0.321475 TGACATGGCAAGATGCGACA 60.321 50.000 0.00 0.00 46.21 4.35
3022 6312 1.003116 GATGACATGGCAAGATGCGAC 60.003 52.381 4.70 0.00 46.21 5.19
3023 6313 1.302366 GATGACATGGCAAGATGCGA 58.698 50.000 4.70 0.00 46.21 5.10
3024 6314 1.018910 TGATGACATGGCAAGATGCG 58.981 50.000 4.70 0.00 46.21 4.73
3025 6315 3.364664 CGTATGATGACATGGCAAGATGC 60.365 47.826 4.70 3.10 39.06 3.91
3026 6316 3.364664 GCGTATGATGACATGGCAAGATG 60.365 47.826 4.70 0.00 37.29 2.90
3027 6317 2.810274 GCGTATGATGACATGGCAAGAT 59.190 45.455 4.70 2.72 37.29 2.40
3028 6318 2.212652 GCGTATGATGACATGGCAAGA 58.787 47.619 4.70 0.00 37.29 3.02
3029 6319 1.941975 TGCGTATGATGACATGGCAAG 59.058 47.619 4.70 0.00 41.02 4.01
3030 6320 2.035530 TGCGTATGATGACATGGCAA 57.964 45.000 4.70 0.00 41.02 4.52
3031 6321 2.259266 ATGCGTATGATGACATGGCA 57.741 45.000 2.18 2.18 44.59 4.92
3032 6322 2.919387 GCAATGCGTATGATGACATGGC 60.919 50.000 0.00 0.00 37.87 4.40
3033 6323 2.291190 TGCAATGCGTATGATGACATGG 59.709 45.455 0.00 0.00 37.87 3.66
3034 6324 3.612472 TGCAATGCGTATGATGACATG 57.388 42.857 0.00 0.00 37.87 3.21
3035 6325 3.816523 TGATGCAATGCGTATGATGACAT 59.183 39.130 0.00 0.00 40.16 3.06
3036 6326 3.204526 TGATGCAATGCGTATGATGACA 58.795 40.909 0.00 0.00 0.00 3.58
3037 6327 3.883631 TGATGCAATGCGTATGATGAC 57.116 42.857 0.00 0.00 0.00 3.06
3038 6328 4.066490 TGATGATGCAATGCGTATGATGA 58.934 39.130 0.00 0.00 0.00 2.92
3039 6329 4.413495 TGATGATGCAATGCGTATGATG 57.587 40.909 0.00 0.00 0.00 3.07
3040 6330 4.457949 ACATGATGATGCAATGCGTATGAT 59.542 37.500 13.10 1.29 32.14 2.45
3041 6331 3.816523 ACATGATGATGCAATGCGTATGA 59.183 39.130 13.10 0.00 32.14 2.15
3042 6332 4.155310 ACATGATGATGCAATGCGTATG 57.845 40.909 0.00 3.12 32.14 2.39
3043 6333 4.841443 AACATGATGATGCAATGCGTAT 57.159 36.364 0.00 0.00 32.14 3.06
3044 6334 4.635833 AAACATGATGATGCAATGCGTA 57.364 36.364 0.00 0.00 32.14 4.42
3045 6335 3.513680 AAACATGATGATGCAATGCGT 57.486 38.095 0.00 0.00 32.14 5.24
3046 6336 5.952698 TTAAAACATGATGATGCAATGCG 57.047 34.783 0.00 0.00 32.14 4.73
3047 6337 8.231837 AGTTTTTAAAACATGATGATGCAATGC 58.768 29.630 20.62 0.00 32.14 3.56
3050 6340 8.068977 GCAAGTTTTTAAAACATGATGATGCAA 58.931 29.630 23.97 0.00 32.14 4.08
3051 6341 7.226128 TGCAAGTTTTTAAAACATGATGATGCA 59.774 29.630 23.97 20.02 34.55 3.96
3052 6342 7.574496 TGCAAGTTTTTAAAACATGATGATGC 58.426 30.769 23.97 18.37 32.14 3.91
3053 6343 9.749490 GATGCAAGTTTTTAAAACATGATGATG 57.251 29.630 23.97 11.68 35.49 3.07
3054 6344 8.938906 GGATGCAAGTTTTTAAAACATGATGAT 58.061 29.630 23.97 14.12 0.00 2.45
3055 6345 7.116090 CGGATGCAAGTTTTTAAAACATGATGA 59.884 33.333 23.97 10.85 0.00 2.92
3056 6346 7.095691 ACGGATGCAAGTTTTTAAAACATGATG 60.096 33.333 23.97 16.20 0.00 3.07
3057 6347 6.928492 ACGGATGCAAGTTTTTAAAACATGAT 59.072 30.769 23.97 15.75 0.00 2.45
3058 6348 6.276847 ACGGATGCAAGTTTTTAAAACATGA 58.723 32.000 23.97 12.63 0.00 3.07
3059 6349 6.199908 TGACGGATGCAAGTTTTTAAAACATG 59.800 34.615 20.62 19.19 0.00 3.21
3060 6350 6.276847 TGACGGATGCAAGTTTTTAAAACAT 58.723 32.000 20.62 7.83 0.00 2.71
3061 6351 5.651530 TGACGGATGCAAGTTTTTAAAACA 58.348 33.333 20.62 2.55 0.00 2.83
3062 6352 5.174943 CCTGACGGATGCAAGTTTTTAAAAC 59.825 40.000 12.16 12.16 0.00 2.43
3063 6353 5.285651 CCTGACGGATGCAAGTTTTTAAAA 58.714 37.500 0.00 0.00 0.00 1.52
3064 6354 4.261825 CCCTGACGGATGCAAGTTTTTAAA 60.262 41.667 0.00 0.00 0.00 1.52
3065 6355 3.254657 CCCTGACGGATGCAAGTTTTTAA 59.745 43.478 0.00 0.00 0.00 1.52
3066 6356 2.817258 CCCTGACGGATGCAAGTTTTTA 59.183 45.455 0.00 0.00 0.00 1.52
3067 6357 1.613437 CCCTGACGGATGCAAGTTTTT 59.387 47.619 0.00 0.00 0.00 1.94
3068 6358 1.247567 CCCTGACGGATGCAAGTTTT 58.752 50.000 0.00 0.00 0.00 2.43
3069 6359 0.110486 ACCCTGACGGATGCAAGTTT 59.890 50.000 0.00 0.00 34.64 2.66
3070 6360 0.110486 AACCCTGACGGATGCAAGTT 59.890 50.000 0.00 0.00 34.64 2.66
3071 6361 0.321653 GAACCCTGACGGATGCAAGT 60.322 55.000 0.00 0.00 34.64 3.16
3072 6362 0.036010 AGAACCCTGACGGATGCAAG 60.036 55.000 0.00 0.00 34.64 4.01
3073 6363 0.036388 GAGAACCCTGACGGATGCAA 60.036 55.000 0.00 0.00 34.64 4.08
3074 6364 1.596934 GAGAACCCTGACGGATGCA 59.403 57.895 0.00 0.00 34.64 3.96
3075 6365 1.153349 GGAGAACCCTGACGGATGC 60.153 63.158 0.00 0.00 34.64 3.91
3076 6366 1.141881 CGGAGAACCCTGACGGATG 59.858 63.158 0.00 0.00 34.64 3.51
3077 6367 1.000019 TCGGAGAACCCTGACGGAT 60.000 57.895 0.00 0.00 34.64 4.18
3078 6368 1.677966 CTCGGAGAACCCTGACGGA 60.678 63.158 0.00 0.00 34.09 4.69
3079 6369 1.533469 AACTCGGAGAACCCTGACGG 61.533 60.000 12.86 0.00 34.09 4.79
3080 6370 0.109226 GAACTCGGAGAACCCTGACG 60.109 60.000 12.86 0.00 34.09 4.35
3081 6371 1.202817 GAGAACTCGGAGAACCCTGAC 59.797 57.143 12.86 0.00 34.09 3.51
3082 6372 1.075698 AGAGAACTCGGAGAACCCTGA 59.924 52.381 12.86 0.00 34.09 3.86
3083 6373 1.474879 GAGAGAACTCGGAGAACCCTG 59.525 57.143 12.86 0.00 34.09 4.45
3084 6374 1.617533 GGAGAGAACTCGGAGAACCCT 60.618 57.143 12.86 3.45 43.44 4.34
3085 6375 0.818938 GGAGAGAACTCGGAGAACCC 59.181 60.000 12.86 0.54 43.44 4.11
3086 6376 1.546961 TGGAGAGAACTCGGAGAACC 58.453 55.000 12.86 6.08 43.44 3.62
3087 6377 3.056465 ACAATGGAGAGAACTCGGAGAAC 60.056 47.826 12.86 5.14 43.44 3.01
3088 6378 3.165875 ACAATGGAGAGAACTCGGAGAA 58.834 45.455 12.86 0.00 43.44 2.87
3089 6379 2.755655 GACAATGGAGAGAACTCGGAGA 59.244 50.000 12.86 0.00 43.44 3.71
3090 6380 2.159170 GGACAATGGAGAGAACTCGGAG 60.159 54.545 2.83 2.83 43.44 4.63
3091 6381 1.825474 GGACAATGGAGAGAACTCGGA 59.175 52.381 0.00 0.00 43.44 4.55
3092 6382 1.469940 CGGACAATGGAGAGAACTCGG 60.470 57.143 0.00 0.00 43.44 4.63
3093 6383 1.202582 ACGGACAATGGAGAGAACTCG 59.797 52.381 0.00 0.00 43.44 4.18
3094 6384 3.056465 AGAACGGACAATGGAGAGAACTC 60.056 47.826 0.00 0.00 41.94 3.01
3095 6385 2.900546 AGAACGGACAATGGAGAGAACT 59.099 45.455 0.00 0.00 0.00 3.01
3096 6386 2.996621 CAGAACGGACAATGGAGAGAAC 59.003 50.000 0.00 0.00 0.00 3.01
3097 6387 2.897326 TCAGAACGGACAATGGAGAGAA 59.103 45.455 0.00 0.00 0.00 2.87
3098 6388 2.493675 CTCAGAACGGACAATGGAGAGA 59.506 50.000 0.00 0.00 0.00 3.10
3099 6389 2.886081 CTCAGAACGGACAATGGAGAG 58.114 52.381 0.00 0.00 0.00 3.20
3100 6390 1.066858 GCTCAGAACGGACAATGGAGA 60.067 52.381 0.00 0.00 0.00 3.71
3101 6391 1.363744 GCTCAGAACGGACAATGGAG 58.636 55.000 0.00 0.00 0.00 3.86
3102 6392 0.036388 GGCTCAGAACGGACAATGGA 60.036 55.000 0.00 0.00 0.00 3.41
3103 6393 1.026718 GGGCTCAGAACGGACAATGG 61.027 60.000 0.00 0.00 0.00 3.16
3104 6394 0.321564 TGGGCTCAGAACGGACAATG 60.322 55.000 0.00 0.00 0.00 2.82
3105 6395 0.400213 TTGGGCTCAGAACGGACAAT 59.600 50.000 0.00 0.00 0.00 2.71
3106 6396 0.534203 GTTGGGCTCAGAACGGACAA 60.534 55.000 0.00 0.00 0.00 3.18
3107 6397 1.070786 GTTGGGCTCAGAACGGACA 59.929 57.895 0.00 0.00 0.00 4.02
3108 6398 1.671379 GGTTGGGCTCAGAACGGAC 60.671 63.158 0.00 0.00 0.00 4.79
3109 6399 1.827399 GAGGTTGGGCTCAGAACGGA 61.827 60.000 0.00 0.00 0.00 4.69
3110 6400 1.376037 GAGGTTGGGCTCAGAACGG 60.376 63.158 0.00 0.00 0.00 4.44
3111 6401 0.951040 GTGAGGTTGGGCTCAGAACG 60.951 60.000 0.00 0.00 0.00 3.95
3112 6402 0.398318 AGTGAGGTTGGGCTCAGAAC 59.602 55.000 0.00 0.00 0.00 3.01
3113 6403 1.140312 AAGTGAGGTTGGGCTCAGAA 58.860 50.000 0.00 0.00 0.00 3.02
3114 6404 0.397941 CAAGTGAGGTTGGGCTCAGA 59.602 55.000 0.00 0.00 0.00 3.27
3115 6405 1.239968 GCAAGTGAGGTTGGGCTCAG 61.240 60.000 0.00 0.00 0.00 3.35
3116 6406 1.228245 GCAAGTGAGGTTGGGCTCA 60.228 57.895 0.00 0.00 0.00 4.26
3117 6407 1.228245 TGCAAGTGAGGTTGGGCTC 60.228 57.895 0.00 0.00 0.00 4.70
3118 6408 1.529244 GTGCAAGTGAGGTTGGGCT 60.529 57.895 0.00 0.00 0.00 5.19
3119 6409 2.908073 CGTGCAAGTGAGGTTGGGC 61.908 63.158 0.00 0.00 0.00 5.36
3120 6410 2.908073 GCGTGCAAGTGAGGTTGGG 61.908 63.158 0.59 0.00 0.00 4.12
3121 6411 2.639286 GCGTGCAAGTGAGGTTGG 59.361 61.111 0.59 0.00 0.00 3.77
3122 6412 2.249309 CGCGTGCAAGTGAGGTTG 59.751 61.111 7.47 0.00 0.00 3.77
3123 6413 3.649986 GCGCGTGCAAGTGAGGTT 61.650 61.111 17.66 0.00 42.15 3.50
3141 6431 1.151777 ATATTTCAGACGTGCCGCGG 61.152 55.000 24.05 24.05 46.52 6.46
3143 6433 4.468095 AATAATATTTCAGACGTGCCGC 57.532 40.909 0.00 0.00 0.00 6.53
3152 6442 9.840427 CCGGCCACTTATAAAATAATATTTCAG 57.160 33.333 2.24 0.00 0.00 3.02
3153 6443 9.575868 TCCGGCCACTTATAAAATAATATTTCA 57.424 29.630 2.24 0.00 0.00 2.69
3159 6449 8.700973 ACATTTTCCGGCCACTTATAAAATAAT 58.299 29.630 2.24 0.00 0.00 1.28
3160 6450 8.068892 ACATTTTCCGGCCACTTATAAAATAA 57.931 30.769 2.24 0.00 0.00 1.40
3161 6451 7.648039 ACATTTTCCGGCCACTTATAAAATA 57.352 32.000 2.24 0.00 0.00 1.40
3162 6452 6.538945 ACATTTTCCGGCCACTTATAAAAT 57.461 33.333 2.24 0.00 0.00 1.82
3163 6453 5.986501 ACATTTTCCGGCCACTTATAAAA 57.013 34.783 2.24 0.00 0.00 1.52
3164 6454 5.712917 AGAACATTTTCCGGCCACTTATAAA 59.287 36.000 2.24 0.00 31.28 1.40
3165 6455 5.258051 AGAACATTTTCCGGCCACTTATAA 58.742 37.500 2.24 0.00 31.28 0.98
3166 6456 4.850680 AGAACATTTTCCGGCCACTTATA 58.149 39.130 2.24 0.00 31.28 0.98
3167 6457 3.694566 GAGAACATTTTCCGGCCACTTAT 59.305 43.478 2.24 0.00 31.28 1.73
3168 6458 3.078837 GAGAACATTTTCCGGCCACTTA 58.921 45.455 2.24 0.00 31.28 2.24
3169 6459 1.886542 GAGAACATTTTCCGGCCACTT 59.113 47.619 2.24 0.00 31.28 3.16
3170 6460 1.534729 GAGAACATTTTCCGGCCACT 58.465 50.000 2.24 0.00 31.28 4.00
3171 6461 0.168128 CGAGAACATTTTCCGGCCAC 59.832 55.000 2.24 0.00 31.28 5.01
3172 6462 0.958382 CCGAGAACATTTTCCGGCCA 60.958 55.000 2.24 0.00 38.15 5.36
3173 6463 0.675522 TCCGAGAACATTTTCCGGCC 60.676 55.000 13.48 0.00 41.58 6.13
3174 6464 1.161843 TTCCGAGAACATTTTCCGGC 58.838 50.000 13.48 0.00 41.58 6.13
3175 6465 2.097466 CCATTCCGAGAACATTTTCCGG 59.903 50.000 12.57 12.57 42.43 5.14
3176 6466 2.097466 CCCATTCCGAGAACATTTTCCG 59.903 50.000 0.00 0.00 31.28 4.30
3177 6467 3.089284 ACCCATTCCGAGAACATTTTCC 58.911 45.455 0.00 0.00 31.28 3.13
3178 6468 4.217550 TCAACCCATTCCGAGAACATTTTC 59.782 41.667 0.00 0.00 0.00 2.29
3179 6469 4.148838 TCAACCCATTCCGAGAACATTTT 58.851 39.130 0.00 0.00 0.00 1.82
3180 6470 3.761897 TCAACCCATTCCGAGAACATTT 58.238 40.909 0.00 0.00 0.00 2.32
3181 6471 3.433306 TCAACCCATTCCGAGAACATT 57.567 42.857 0.00 0.00 0.00 2.71
3182 6472 3.433306 TTCAACCCATTCCGAGAACAT 57.567 42.857 0.00 0.00 0.00 2.71
3183 6473 2.940994 TTCAACCCATTCCGAGAACA 57.059 45.000 0.00 0.00 0.00 3.18
3184 6474 3.146847 ACTTTCAACCCATTCCGAGAAC 58.853 45.455 0.00 0.00 0.00 3.01
3185 6475 3.502123 ACTTTCAACCCATTCCGAGAA 57.498 42.857 0.00 0.00 0.00 2.87
3186 6476 3.146066 CAACTTTCAACCCATTCCGAGA 58.854 45.455 0.00 0.00 0.00 4.04
3187 6477 2.228822 CCAACTTTCAACCCATTCCGAG 59.771 50.000 0.00 0.00 0.00 4.63
3188 6478 2.235016 CCAACTTTCAACCCATTCCGA 58.765 47.619 0.00 0.00 0.00 4.55
3189 6479 1.336795 GCCAACTTTCAACCCATTCCG 60.337 52.381 0.00 0.00 0.00 4.30
3190 6480 1.336795 CGCCAACTTTCAACCCATTCC 60.337 52.381 0.00 0.00 0.00 3.01
3191 6481 1.339929 ACGCCAACTTTCAACCCATTC 59.660 47.619 0.00 0.00 0.00 2.67
3192 6482 1.068434 CACGCCAACTTTCAACCCATT 59.932 47.619 0.00 0.00 0.00 3.16
3193 6483 0.673437 CACGCCAACTTTCAACCCAT 59.327 50.000 0.00 0.00 0.00 4.00
3194 6484 0.681564 ACACGCCAACTTTCAACCCA 60.682 50.000 0.00 0.00 0.00 4.51
3195 6485 0.248866 CACACGCCAACTTTCAACCC 60.249 55.000 0.00 0.00 0.00 4.11
3196 6486 0.248866 CCACACGCCAACTTTCAACC 60.249 55.000 0.00 0.00 0.00 3.77
3197 6487 0.454196 ACCACACGCCAACTTTCAAC 59.546 50.000 0.00 0.00 0.00 3.18
3198 6488 0.736053 GACCACACGCCAACTTTCAA 59.264 50.000 0.00 0.00 0.00 2.69
3199 6489 0.107410 AGACCACACGCCAACTTTCA 60.107 50.000 0.00 0.00 0.00 2.69
3200 6490 1.021968 AAGACCACACGCCAACTTTC 58.978 50.000 0.00 0.00 0.00 2.62
3201 6491 0.738389 CAAGACCACACGCCAACTTT 59.262 50.000 0.00 0.00 0.00 2.66
3202 6492 0.393808 ACAAGACCACACGCCAACTT 60.394 50.000 0.00 0.00 0.00 2.66
3203 6493 0.393808 AACAAGACCACACGCCAACT 60.394 50.000 0.00 0.00 0.00 3.16
3204 6494 0.454196 AAACAAGACCACACGCCAAC 59.546 50.000 0.00 0.00 0.00 3.77
3205 6495 1.178276 AAAACAAGACCACACGCCAA 58.822 45.000 0.00 0.00 0.00 4.52
3206 6496 1.944024 CTAAAACAAGACCACACGCCA 59.056 47.619 0.00 0.00 0.00 5.69
3207 6497 1.944709 ACTAAAACAAGACCACACGCC 59.055 47.619 0.00 0.00 0.00 5.68
3208 6498 2.353579 ACACTAAAACAAGACCACACGC 59.646 45.455 0.00 0.00 0.00 5.34
3209 6499 5.045215 TCTACACTAAAACAAGACCACACG 58.955 41.667 0.00 0.00 0.00 4.49
3210 6500 8.086522 TCTATCTACACTAAAACAAGACCACAC 58.913 37.037 0.00 0.00 0.00 3.82
3211 6501 8.086522 GTCTATCTACACTAAAACAAGACCACA 58.913 37.037 0.00 0.00 0.00 4.17
3212 6502 7.544915 GGTCTATCTACACTAAAACAAGACCAC 59.455 40.741 11.73 0.00 46.27 4.16
3213 6503 7.576287 CGGTCTATCTACACTAAAACAAGACCA 60.576 40.741 15.67 0.00 47.00 4.02
3214 6504 6.750963 CGGTCTATCTACACTAAAACAAGACC 59.249 42.308 7.47 7.47 44.49 3.85
3215 6505 6.253083 GCGGTCTATCTACACTAAAACAAGAC 59.747 42.308 0.00 0.00 0.00 3.01
3216 6506 6.327934 GCGGTCTATCTACACTAAAACAAGA 58.672 40.000 0.00 0.00 0.00 3.02
3217 6507 5.519206 GGCGGTCTATCTACACTAAAACAAG 59.481 44.000 0.00 0.00 0.00 3.16
3218 6508 5.186409 AGGCGGTCTATCTACACTAAAACAA 59.814 40.000 0.00 0.00 0.00 2.83
3219 6509 4.708421 AGGCGGTCTATCTACACTAAAACA 59.292 41.667 0.00 0.00 0.00 2.83
3220 6510 5.041940 CAGGCGGTCTATCTACACTAAAAC 58.958 45.833 0.00 0.00 0.00 2.43
3221 6511 4.708421 ACAGGCGGTCTATCTACACTAAAA 59.292 41.667 0.00 0.00 0.00 1.52
3222 6512 4.275810 ACAGGCGGTCTATCTACACTAAA 58.724 43.478 0.00 0.00 0.00 1.85
3223 6513 3.881688 GACAGGCGGTCTATCTACACTAA 59.118 47.826 10.66 0.00 43.46 2.24
3224 6514 3.474600 GACAGGCGGTCTATCTACACTA 58.525 50.000 10.66 0.00 43.46 2.74
3225 6515 2.299521 GACAGGCGGTCTATCTACACT 58.700 52.381 10.66 0.00 43.46 3.55
3226 6516 2.778187 GACAGGCGGTCTATCTACAC 57.222 55.000 10.66 0.00 43.46 2.90
3230 6520 9.016576 CAATGAAATTTGACAGGCGGTCTATCT 62.017 40.741 18.35 0.00 40.35 1.98
3231 6521 6.948764 CAATGAAATTTGACAGGCGGTCTATC 60.949 42.308 18.35 6.81 40.35 2.08
3232 6522 5.163622 CAATGAAATTTGACAGGCGGTCTAT 60.164 40.000 18.35 9.26 40.35 1.98
3233 6523 4.155826 CAATGAAATTTGACAGGCGGTCTA 59.844 41.667 18.35 8.56 40.35 2.59
3234 6524 3.057315 CAATGAAATTTGACAGGCGGTCT 60.057 43.478 18.35 0.00 40.35 3.85
3235 6525 3.244976 CAATGAAATTTGACAGGCGGTC 58.755 45.455 11.02 11.02 40.19 4.79
3236 6526 2.610232 GCAATGAAATTTGACAGGCGGT 60.610 45.455 0.00 0.00 31.22 5.68
3237 6527 1.994779 GCAATGAAATTTGACAGGCGG 59.005 47.619 0.00 0.00 31.22 6.13
3238 6528 2.674954 TGCAATGAAATTTGACAGGCG 58.325 42.857 0.00 0.00 31.22 5.52
3239 6529 4.201647 CGAATGCAATGAAATTTGACAGGC 60.202 41.667 0.00 0.00 31.22 4.85
3240 6530 4.327898 CCGAATGCAATGAAATTTGACAGG 59.672 41.667 0.00 0.00 31.22 4.00
3241 6531 5.162794 TCCGAATGCAATGAAATTTGACAG 58.837 37.500 0.00 0.00 31.22 3.51
3242 6532 5.131594 TCCGAATGCAATGAAATTTGACA 57.868 34.783 0.00 0.00 31.22 3.58
3243 6533 5.163513 ACTCCGAATGCAATGAAATTTGAC 58.836 37.500 0.00 0.00 31.22 3.18
3244 6534 5.389859 ACTCCGAATGCAATGAAATTTGA 57.610 34.783 0.00 0.00 31.22 2.69
3245 6535 5.220080 CGAACTCCGAATGCAATGAAATTTG 60.220 40.000 0.00 0.00 41.76 2.32
3246 6536 4.858692 CGAACTCCGAATGCAATGAAATTT 59.141 37.500 0.00 0.00 41.76 1.82
3247 6537 4.082787 ACGAACTCCGAATGCAATGAAATT 60.083 37.500 0.00 0.00 41.76 1.82
3248 6538 3.440173 ACGAACTCCGAATGCAATGAAAT 59.560 39.130 0.00 0.00 41.76 2.17
3249 6539 2.811431 ACGAACTCCGAATGCAATGAAA 59.189 40.909 0.00 0.00 41.76 2.69
3250 6540 2.422597 ACGAACTCCGAATGCAATGAA 58.577 42.857 0.00 0.00 41.76 2.57
3251 6541 2.093306 ACGAACTCCGAATGCAATGA 57.907 45.000 0.00 0.00 41.76 2.57
3252 6542 2.900122 AACGAACTCCGAATGCAATG 57.100 45.000 0.00 0.00 41.76 2.82
3253 6543 2.811431 TCAAACGAACTCCGAATGCAAT 59.189 40.909 0.00 0.00 41.76 3.56
3254 6544 2.214347 TCAAACGAACTCCGAATGCAA 58.786 42.857 0.00 0.00 41.76 4.08
3255 6545 1.872388 TCAAACGAACTCCGAATGCA 58.128 45.000 0.00 0.00 41.76 3.96
3256 6546 3.617263 ACTATCAAACGAACTCCGAATGC 59.383 43.478 0.00 0.00 41.76 3.56
3257 6547 5.103000 AGACTATCAAACGAACTCCGAATG 58.897 41.667 0.00 0.00 41.76 2.67
3258 6548 5.326200 AGACTATCAAACGAACTCCGAAT 57.674 39.130 0.00 0.00 41.76 3.34
3259 6549 4.778534 AGACTATCAAACGAACTCCGAA 57.221 40.909 0.00 0.00 41.76 4.30
3260 6550 5.392380 GGTTAGACTATCAAACGAACTCCGA 60.392 44.000 0.00 0.00 41.76 4.55
3261 6551 4.797349 GGTTAGACTATCAAACGAACTCCG 59.203 45.833 0.00 0.00 45.44 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.