Multiple sequence alignment - TraesCS5A01G239600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G239600 chr5A 100.000 2792 0 0 1 2792 456035301 456032510 0.000000e+00 5156.0
1 TraesCS5A01G239600 chr5A 89.465 1177 99 13 972 2128 458202738 458203909 0.000000e+00 1463.0
2 TraesCS5A01G239600 chr5A 86.792 53 6 1 2133 2184 73316021 73316073 1.080000e-04 58.4
3 TraesCS5A01G239600 chr5A 85.185 54 7 1 2132 2184 675735736 675735789 1.000000e-03 54.7
4 TraesCS5A01G239600 chr5B 93.057 1181 48 16 976 2129 421645458 421646631 0.000000e+00 1696.0
5 TraesCS5A01G239600 chr5B 92.838 377 16 6 2406 2782 421647562 421647927 1.140000e-148 536.0
6 TraesCS5A01G239600 chr5B 93.069 101 7 0 2292 2392 421647206 421647306 6.230000e-32 148.0
7 TraesCS5A01G239600 chr5B 84.076 157 17 7 416 570 534815008 534814858 8.060000e-31 145.0
8 TraesCS5A01G239600 chr5B 87.705 122 3 4 2222 2331 421646874 421646995 6.270000e-27 132.0
9 TraesCS5A01G239600 chr5B 97.143 35 0 1 2172 2206 7023322 7023289 1.080000e-04 58.4
10 TraesCS5A01G239600 chr5D 91.135 1004 77 7 990 1990 356846543 356847537 0.000000e+00 1351.0
11 TraesCS5A01G239600 chr5D 97.143 35 0 1 2172 2206 540237939 540237906 1.080000e-04 58.4
12 TraesCS5A01G239600 chr4A 94.434 539 18 1 172 698 27192873 27193411 0.000000e+00 819.0
13 TraesCS5A01G239600 chr4A 98.333 180 3 0 1 180 27191408 27191587 1.610000e-82 316.0
14 TraesCS5A01G239600 chr4B 92.262 336 14 2 3 326 657625266 657625601 1.510000e-127 466.0
15 TraesCS5A01G239600 chr4B 86.626 329 30 13 635 960 337551034 337550717 4.420000e-93 351.0
16 TraesCS5A01G239600 chr4B 95.122 41 2 0 2132 2172 524614965 524615005 6.460000e-07 65.8
17 TraesCS5A01G239600 chr4B 97.143 35 0 1 2172 2206 578072152 578072185 1.080000e-04 58.4
18 TraesCS5A01G239600 chr3B 88.976 381 29 3 177 544 8765470 8765850 2.530000e-125 459.0
19 TraesCS5A01G239600 chr3B 86.217 341 37 10 620 956 54988909 54989243 7.350000e-96 361.0
20 TraesCS5A01G239600 chr3B 97.619 42 1 0 2 43 8765402 8765443 3.860000e-09 73.1
21 TraesCS5A01G239600 chr3B 97.143 35 1 0 327 361 690370671 690370637 3.000000e-05 60.2
22 TraesCS5A01G239600 chr1A 89.859 355 29 6 603 956 474582374 474582722 1.530000e-122 449.0
23 TraesCS5A01G239600 chr1A 100.000 29 0 0 2172 2200 99312567 99312539 1.000000e-03 54.7
24 TraesCS5A01G239600 chr1A 100.000 29 0 0 2134 2162 553903900 553903928 1.000000e-03 54.7
25 TraesCS5A01G239600 chr1A 100.000 29 0 0 2132 2160 565747545 565747573 1.000000e-03 54.7
26 TraesCS5A01G239600 chr1B 89.688 320 26 7 642 958 74120241 74119926 4.330000e-108 401.0
27 TraesCS5A01G239600 chr1B 95.349 43 2 0 327 369 279496621 279496579 4.990000e-08 69.4
28 TraesCS5A01G239600 chr1B 100.000 30 0 0 2132 2161 7547539 7547568 3.880000e-04 56.5
29 TraesCS5A01G239600 chr6B 84.910 391 45 3 580 956 676608372 676608762 4.360000e-103 385.0
30 TraesCS5A01G239600 chr6B 87.805 328 35 2 634 956 676575041 676575368 2.030000e-101 379.0
31 TraesCS5A01G239600 chr6B 87.805 328 35 2 634 956 676579886 676580213 2.030000e-101 379.0
32 TraesCS5A01G239600 chr6B 87.805 328 35 2 634 956 676613539 676613866 2.030000e-101 379.0
33 TraesCS5A01G239600 chr6B 87.619 315 33 2 642 956 562486256 562486564 7.350000e-96 361.0
34 TraesCS5A01G239600 chr6B 88.327 257 25 4 22 276 659947064 659947317 1.260000e-78 303.0
35 TraesCS5A01G239600 chr7A 92.727 55 2 2 194 247 188031398 188031345 8.290000e-11 78.7
36 TraesCS5A01G239600 chr7B 97.674 43 1 0 327 369 452469508 452469466 1.070000e-09 75.0
37 TraesCS5A01G239600 chr7B 90.909 55 2 3 194 247 152048285 152048337 1.390000e-08 71.3
38 TraesCS5A01G239600 chr6A 90.698 43 4 0 2130 2172 17303277 17303319 1.080000e-04 58.4
39 TraesCS5A01G239600 chr2A 97.143 35 0 1 2172 2206 103132941 103132974 1.080000e-04 58.4
40 TraesCS5A01G239600 chr3A 96.875 32 1 0 2130 2161 746546675 746546706 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G239600 chr5A 456032510 456035301 2791 True 5156.0 5156 100.00000 1 2792 1 chr5A.!!$R1 2791
1 TraesCS5A01G239600 chr5A 458202738 458203909 1171 False 1463.0 1463 89.46500 972 2128 1 chr5A.!!$F2 1156
2 TraesCS5A01G239600 chr5B 421645458 421647927 2469 False 628.0 1696 91.66725 976 2782 4 chr5B.!!$F1 1806
3 TraesCS5A01G239600 chr5D 356846543 356847537 994 False 1351.0 1351 91.13500 990 1990 1 chr5D.!!$F1 1000
4 TraesCS5A01G239600 chr4A 27191408 27193411 2003 False 567.5 819 96.38350 1 698 2 chr4A.!!$F1 697

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
908 2215 0.032267 GATCCGACGGTCCAGAATCC 59.968 60.0 14.79 0.0 0.0 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1932 3279 0.106708 CACACCGCCACTGCCTATAT 59.893 55.0 0.0 0.0 0.0 0.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 3.818773 ACCTAAGTGCATGTTTGGTGTAC 59.181 43.478 14.27 0.00 32.63 2.90
122 123 2.451132 CGTGCTTGTACTCCATAGACG 58.549 52.381 0.00 0.00 0.00 4.18
226 1521 0.248289 TACGAGGTTGTAGCCAAGGC 59.752 55.000 2.02 2.02 42.33 4.35
239 1534 1.023513 CCAAGGCAGTAGCACAGCTC 61.024 60.000 0.00 0.00 44.61 4.09
258 1553 4.742201 TCGCCGCAACTGAGCTCC 62.742 66.667 12.15 0.00 0.00 4.70
307 1614 3.358076 CTTGCGTCCGACCTCCTCC 62.358 68.421 0.00 0.00 0.00 4.30
326 1633 1.520342 GAGCGCTGCCTCCTAACAG 60.520 63.158 18.48 0.00 36.96 3.16
338 1645 1.227263 CTAACAGCCACCGGATCCG 60.227 63.158 27.65 27.65 39.44 4.18
364 1671 4.373116 GGACTCGCAGCCAACGGA 62.373 66.667 0.00 0.00 0.00 4.69
365 1672 2.125512 GACTCGCAGCCAACGGAT 60.126 61.111 0.00 0.00 0.00 4.18
366 1673 1.741770 GACTCGCAGCCAACGGATT 60.742 57.895 0.00 0.00 0.00 3.01
367 1674 1.696832 GACTCGCAGCCAACGGATTC 61.697 60.000 0.00 0.00 0.00 2.52
368 1675 2.802667 CTCGCAGCCAACGGATTCG 61.803 63.158 0.00 0.00 43.02 3.34
369 1676 3.864686 CGCAGCCAACGGATTCGG 61.865 66.667 0.00 0.00 41.39 4.30
370 1677 3.508840 GCAGCCAACGGATTCGGG 61.509 66.667 0.00 0.00 41.39 5.14
371 1678 2.824041 CAGCCAACGGATTCGGGG 60.824 66.667 0.00 0.00 41.39 5.73
372 1679 3.006728 AGCCAACGGATTCGGGGA 61.007 61.111 10.29 0.00 41.39 4.81
373 1680 2.822701 GCCAACGGATTCGGGGAC 60.823 66.667 10.29 0.00 41.39 4.46
393 1700 4.552365 CGATGTGGCGCCCATCCT 62.552 66.667 33.51 16.75 36.23 3.24
394 1701 2.592861 GATGTGGCGCCCATCCTC 60.593 66.667 31.65 18.44 35.28 3.71
395 1702 4.195334 ATGTGGCGCCCATCCTCC 62.195 66.667 26.77 3.24 35.28 4.30
443 1750 4.047059 GCGACGAGAACCCGTGGA 62.047 66.667 0.00 0.00 43.49 4.02
444 1751 2.646719 CGACGAGAACCCGTGGAA 59.353 61.111 0.00 0.00 43.49 3.53
445 1752 1.443872 CGACGAGAACCCGTGGAAG 60.444 63.158 0.00 0.00 43.49 3.46
446 1753 1.737008 GACGAGAACCCGTGGAAGC 60.737 63.158 0.00 0.00 43.49 3.86
447 1754 2.342279 CGAGAACCCGTGGAAGCA 59.658 61.111 0.00 0.00 0.00 3.91
448 1755 2.027625 CGAGAACCCGTGGAAGCAC 61.028 63.158 0.00 0.00 0.00 4.40
449 1756 2.027625 GAGAACCCGTGGAAGCACG 61.028 63.158 0.00 0.00 46.92 5.34
450 1757 3.723348 GAACCCGTGGAAGCACGC 61.723 66.667 0.00 0.00 46.11 5.34
456 1763 4.666532 GTGGAAGCACGCGCACAC 62.667 66.667 5.73 2.66 42.27 3.82
479 1786 3.522731 CGACGCCCTCCCTCTCTG 61.523 72.222 0.00 0.00 0.00 3.35
480 1787 3.151022 GACGCCCTCCCTCTCTGG 61.151 72.222 0.00 0.00 0.00 3.86
481 1788 3.966930 GACGCCCTCCCTCTCTGGT 62.967 68.421 0.00 0.00 0.00 4.00
482 1789 3.151022 CGCCCTCCCTCTCTGGTC 61.151 72.222 0.00 0.00 0.00 4.02
483 1790 3.151022 GCCCTCCCTCTCTGGTCG 61.151 72.222 0.00 0.00 0.00 4.79
484 1791 3.151022 CCCTCCCTCTCTGGTCGC 61.151 72.222 0.00 0.00 0.00 5.19
485 1792 2.043450 CCTCCCTCTCTGGTCGCT 60.043 66.667 0.00 0.00 0.00 4.93
486 1793 1.684049 CCTCCCTCTCTGGTCGCTT 60.684 63.158 0.00 0.00 0.00 4.68
487 1794 1.671901 CCTCCCTCTCTGGTCGCTTC 61.672 65.000 0.00 0.00 0.00 3.86
488 1795 1.671901 CTCCCTCTCTGGTCGCTTCC 61.672 65.000 0.00 0.00 0.00 3.46
489 1796 1.684049 CCCTCTCTGGTCGCTTCCT 60.684 63.158 0.00 0.00 0.00 3.36
490 1797 1.671901 CCCTCTCTGGTCGCTTCCTC 61.672 65.000 0.00 0.00 0.00 3.71
491 1798 1.671901 CCTCTCTGGTCGCTTCCTCC 61.672 65.000 0.00 0.00 0.00 4.30
492 1799 0.967887 CTCTCTGGTCGCTTCCTCCA 60.968 60.000 0.00 0.00 0.00 3.86
493 1800 1.216710 CTCTGGTCGCTTCCTCCAC 59.783 63.158 0.00 0.00 0.00 4.02
494 1801 1.533033 TCTGGTCGCTTCCTCCACA 60.533 57.895 0.00 0.00 0.00 4.17
495 1802 1.118965 TCTGGTCGCTTCCTCCACAA 61.119 55.000 0.00 0.00 0.00 3.33
496 1803 0.951040 CTGGTCGCTTCCTCCACAAC 60.951 60.000 0.00 0.00 0.00 3.32
497 1804 2.027625 GGTCGCTTCCTCCACAACG 61.028 63.158 0.00 0.00 0.00 4.10
498 1805 2.357034 TCGCTTCCTCCACAACGC 60.357 61.111 0.00 0.00 0.00 4.84
499 1806 3.777925 CGCTTCCTCCACAACGCG 61.778 66.667 3.53 3.53 34.50 6.01
500 1807 2.665185 GCTTCCTCCACAACGCGT 60.665 61.111 5.58 5.58 0.00 6.01
501 1808 2.668280 GCTTCCTCCACAACGCGTC 61.668 63.158 14.44 0.00 0.00 5.19
502 1809 2.355363 TTCCTCCACAACGCGTCG 60.355 61.111 14.44 2.72 0.00 5.12
503 1810 3.851845 TTCCTCCACAACGCGTCGG 62.852 63.158 14.44 14.38 0.00 4.79
505 1812 4.657824 CTCCACAACGCGTCGGGT 62.658 66.667 14.44 9.42 0.00 5.28
506 1813 3.271706 CTCCACAACGCGTCGGGTA 62.272 63.158 14.44 0.00 0.00 3.69
507 1814 2.807895 CCACAACGCGTCGGGTAG 60.808 66.667 14.44 8.65 0.00 3.18
508 1815 2.807895 CACAACGCGTCGGGTAGG 60.808 66.667 14.44 13.03 0.00 3.18
509 1816 3.297620 ACAACGCGTCGGGTAGGT 61.298 61.111 14.44 13.65 0.00 3.08
510 1817 2.807895 CAACGCGTCGGGTAGGTG 60.808 66.667 14.44 6.78 0.00 4.00
511 1818 4.060038 AACGCGTCGGGTAGGTGG 62.060 66.667 14.44 0.00 0.00 4.61
516 1823 4.446413 GTCGGGTAGGTGGCGGTG 62.446 72.222 0.00 0.00 0.00 4.94
517 1824 4.682334 TCGGGTAGGTGGCGGTGA 62.682 66.667 0.00 0.00 0.00 4.02
518 1825 3.467226 CGGGTAGGTGGCGGTGAT 61.467 66.667 0.00 0.00 0.00 3.06
519 1826 2.189521 GGGTAGGTGGCGGTGATG 59.810 66.667 0.00 0.00 0.00 3.07
520 1827 2.189521 GGTAGGTGGCGGTGATGG 59.810 66.667 0.00 0.00 0.00 3.51
521 1828 2.513897 GTAGGTGGCGGTGATGGC 60.514 66.667 0.00 0.00 0.00 4.40
522 1829 4.155733 TAGGTGGCGGTGATGGCG 62.156 66.667 0.00 0.00 37.19 5.69
550 1857 3.866582 GGACGGGCAGGGAGGATG 61.867 72.222 0.00 0.00 0.00 3.51
551 1858 3.866582 GACGGGCAGGGAGGATGG 61.867 72.222 0.00 0.00 0.00 3.51
554 1861 4.201122 GGGCAGGGAGGATGGCTG 62.201 72.222 0.00 0.00 42.51 4.85
555 1862 4.201122 GGCAGGGAGGATGGCTGG 62.201 72.222 0.00 0.00 39.94 4.85
556 1863 4.891037 GCAGGGAGGATGGCTGGC 62.891 72.222 0.00 0.00 0.00 4.85
557 1864 4.559063 CAGGGAGGATGGCTGGCG 62.559 72.222 0.00 0.00 0.00 5.69
564 1871 4.864334 GATGGCTGGCGGGGAGTG 62.864 72.222 0.00 0.00 0.00 3.51
572 1879 4.208686 GCGGGGAGTGACGGCTAG 62.209 72.222 0.00 0.00 0.00 3.42
573 1880 3.528370 CGGGGAGTGACGGCTAGG 61.528 72.222 0.00 0.00 0.00 3.02
574 1881 3.155167 GGGGAGTGACGGCTAGGG 61.155 72.222 0.00 0.00 0.00 3.53
575 1882 2.363925 GGGAGTGACGGCTAGGGT 60.364 66.667 0.00 0.00 0.00 4.34
576 1883 1.988406 GGGAGTGACGGCTAGGGTT 60.988 63.158 0.00 0.00 0.00 4.11
577 1884 1.516423 GGAGTGACGGCTAGGGTTC 59.484 63.158 0.00 0.00 0.00 3.62
578 1885 1.255667 GGAGTGACGGCTAGGGTTCA 61.256 60.000 0.00 0.00 0.00 3.18
579 1886 0.606604 GAGTGACGGCTAGGGTTCAA 59.393 55.000 0.00 0.00 0.00 2.69
580 1887 1.207329 GAGTGACGGCTAGGGTTCAAT 59.793 52.381 0.00 0.00 0.00 2.57
581 1888 1.207329 AGTGACGGCTAGGGTTCAATC 59.793 52.381 0.00 0.00 0.00 2.67
582 1889 0.174845 TGACGGCTAGGGTTCAATCG 59.825 55.000 0.00 0.00 0.00 3.34
583 1890 1.152383 GACGGCTAGGGTTCAATCGC 61.152 60.000 0.00 0.00 0.00 4.58
584 1891 2.237751 CGGCTAGGGTTCAATCGCG 61.238 63.158 0.00 0.00 0.00 5.87
585 1892 1.887707 GGCTAGGGTTCAATCGCGG 60.888 63.158 6.13 0.00 0.00 6.46
586 1893 1.153429 GCTAGGGTTCAATCGCGGT 60.153 57.895 6.13 0.00 0.00 5.68
587 1894 0.743345 GCTAGGGTTCAATCGCGGTT 60.743 55.000 6.13 0.56 0.00 4.44
588 1895 1.287425 CTAGGGTTCAATCGCGGTTC 58.713 55.000 0.00 0.00 0.00 3.62
589 1896 0.458889 TAGGGTTCAATCGCGGTTCG 60.459 55.000 0.00 0.00 40.15 3.95
597 1904 3.744719 TCGCGGTTCGAGGAGGTG 61.745 66.667 6.13 0.00 43.16 4.00
598 1905 4.796231 CGCGGTTCGAGGAGGTGG 62.796 72.222 0.00 0.00 41.67 4.61
599 1906 4.452733 GCGGTTCGAGGAGGTGGG 62.453 72.222 0.00 0.00 0.00 4.61
600 1907 2.995574 CGGTTCGAGGAGGTGGGT 60.996 66.667 0.00 0.00 0.00 4.51
601 1908 2.663196 GGTTCGAGGAGGTGGGTG 59.337 66.667 0.00 0.00 0.00 4.61
602 1909 2.663196 GTTCGAGGAGGTGGGTGG 59.337 66.667 0.00 0.00 0.00 4.61
603 1910 3.319198 TTCGAGGAGGTGGGTGGC 61.319 66.667 0.00 0.00 0.00 5.01
629 1936 3.550431 CGATGCGGGTGGGAGGAT 61.550 66.667 0.00 0.00 0.00 3.24
630 1937 2.207229 CGATGCGGGTGGGAGGATA 61.207 63.158 0.00 0.00 0.00 2.59
631 1938 1.674057 GATGCGGGTGGGAGGATAG 59.326 63.158 0.00 0.00 0.00 2.08
632 1939 1.831652 GATGCGGGTGGGAGGATAGG 61.832 65.000 0.00 0.00 0.00 2.57
633 1940 2.122989 GCGGGTGGGAGGATAGGA 60.123 66.667 0.00 0.00 0.00 2.94
634 1941 2.210711 GCGGGTGGGAGGATAGGAG 61.211 68.421 0.00 0.00 0.00 3.69
635 1942 1.534235 CGGGTGGGAGGATAGGAGG 60.534 68.421 0.00 0.00 0.00 4.30
636 1943 1.843832 GGGTGGGAGGATAGGAGGC 60.844 68.421 0.00 0.00 0.00 4.70
637 1944 2.210711 GGTGGGAGGATAGGAGGCG 61.211 68.421 0.00 0.00 0.00 5.52
638 1945 2.524394 TGGGAGGATAGGAGGCGC 60.524 66.667 0.00 0.00 0.00 6.53
639 1946 3.686045 GGGAGGATAGGAGGCGCG 61.686 72.222 0.00 0.00 0.00 6.86
640 1947 4.365505 GGAGGATAGGAGGCGCGC 62.366 72.222 25.94 25.94 0.00 6.86
641 1948 4.708968 GAGGATAGGAGGCGCGCG 62.709 72.222 28.44 28.44 0.00 6.86
657 1964 4.548513 CGGGAGGGAGGGAGGGAG 62.549 77.778 0.00 0.00 0.00 4.30
658 1965 4.179599 GGGAGGGAGGGAGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
659 1966 4.890306 GGAGGGAGGGAGGGAGGC 62.890 77.778 0.00 0.00 0.00 4.70
679 1986 4.465446 CTGCGGGAGGGAGGGAGA 62.465 72.222 0.00 0.00 0.00 3.71
680 1987 4.465446 TGCGGGAGGGAGGGAGAG 62.465 72.222 0.00 0.00 0.00 3.20
681 1988 4.144727 GCGGGAGGGAGGGAGAGA 62.145 72.222 0.00 0.00 0.00 3.10
682 1989 2.197324 CGGGAGGGAGGGAGAGAG 59.803 72.222 0.00 0.00 0.00 3.20
683 1990 2.612251 GGGAGGGAGGGAGAGAGG 59.388 72.222 0.00 0.00 0.00 3.69
684 1991 2.015726 GGGAGGGAGGGAGAGAGGA 61.016 68.421 0.00 0.00 0.00 3.71
685 1992 1.541672 GGAGGGAGGGAGAGAGGAG 59.458 68.421 0.00 0.00 0.00 3.69
686 1993 1.541672 GAGGGAGGGAGAGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
687 1994 0.996762 GAGGGAGGGAGAGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
688 1995 0.998945 AGGGAGGGAGAGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
689 1996 1.541672 GGAGGGAGAGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
690 1997 1.152546 GAGGGAGAGAGGAGGAGGC 60.153 68.421 0.00 0.00 0.00 4.70
691 1998 2.520741 GGGAGAGAGGAGGAGGCG 60.521 72.222 0.00 0.00 0.00 5.52
692 1999 2.520741 GGAGAGAGGAGGAGGCGG 60.521 72.222 0.00 0.00 0.00 6.13
693 2000 3.223589 GAGAGAGGAGGAGGCGGC 61.224 72.222 0.00 0.00 0.00 6.53
694 2001 3.731766 GAGAGAGGAGGAGGCGGCT 62.732 68.421 13.09 13.09 0.00 5.52
695 2002 2.196229 GAGAGGAGGAGGCGGCTA 59.804 66.667 13.24 0.00 0.00 3.93
696 2003 1.901464 GAGAGGAGGAGGCGGCTAG 60.901 68.421 13.24 0.00 0.00 3.42
697 2004 2.915137 GAGGAGGAGGCGGCTAGG 60.915 72.222 13.24 0.00 0.00 3.02
698 2005 3.742248 GAGGAGGAGGCGGCTAGGT 62.742 68.421 13.24 0.00 0.00 3.08
699 2006 3.228017 GGAGGAGGCGGCTAGGTC 61.228 72.222 13.24 8.87 0.00 3.85
700 2007 2.123640 GAGGAGGCGGCTAGGTCT 60.124 66.667 13.24 7.43 0.00 3.85
701 2008 2.123640 AGGAGGCGGCTAGGTCTC 60.124 66.667 13.24 0.00 37.93 3.36
703 2010 2.442272 GAGGCGGCTAGGTCTCCA 60.442 66.667 13.24 0.00 32.49 3.86
704 2011 2.760385 AGGCGGCTAGGTCTCCAC 60.760 66.667 11.03 0.00 0.00 4.02
705 2012 3.851128 GGCGGCTAGGTCTCCACC 61.851 72.222 0.00 0.00 44.19 4.61
706 2013 3.075005 GCGGCTAGGTCTCCACCA 61.075 66.667 0.00 0.00 46.68 4.17
707 2014 2.893398 CGGCTAGGTCTCCACCAC 59.107 66.667 0.00 0.00 46.68 4.16
708 2015 1.982395 CGGCTAGGTCTCCACCACA 60.982 63.158 0.00 0.00 46.68 4.17
709 2016 1.901085 GGCTAGGTCTCCACCACAG 59.099 63.158 0.00 0.00 46.68 3.66
710 2017 1.617947 GGCTAGGTCTCCACCACAGG 61.618 65.000 0.00 0.00 46.68 4.00
711 2018 0.614979 GCTAGGTCTCCACCACAGGA 60.615 60.000 0.00 0.00 46.68 3.86
736 2043 3.870538 CCCCCTTTTATACCCCACTAC 57.129 52.381 0.00 0.00 0.00 2.73
737 2044 2.105306 CCCCCTTTTATACCCCACTACG 59.895 54.545 0.00 0.00 0.00 3.51
738 2045 2.486013 CCCCTTTTATACCCCACTACGC 60.486 54.545 0.00 0.00 0.00 4.42
739 2046 2.476821 CCTTTTATACCCCACTACGCG 58.523 52.381 3.53 3.53 0.00 6.01
740 2047 2.101249 CCTTTTATACCCCACTACGCGA 59.899 50.000 15.93 0.00 0.00 5.87
741 2048 3.430651 CCTTTTATACCCCACTACGCGAA 60.431 47.826 15.93 0.00 0.00 4.70
742 2049 3.883830 TTTATACCCCACTACGCGAAA 57.116 42.857 15.93 0.00 0.00 3.46
743 2050 4.405116 TTTATACCCCACTACGCGAAAT 57.595 40.909 15.93 0.00 0.00 2.17
744 2051 2.234300 ATACCCCACTACGCGAAATG 57.766 50.000 15.93 7.23 0.00 2.32
745 2052 1.184431 TACCCCACTACGCGAAATGA 58.816 50.000 15.93 0.00 0.00 2.57
746 2053 0.390735 ACCCCACTACGCGAAATGAC 60.391 55.000 15.93 0.00 0.00 3.06
747 2054 1.087771 CCCCACTACGCGAAATGACC 61.088 60.000 15.93 0.00 0.00 4.02
748 2055 1.418342 CCCACTACGCGAAATGACCG 61.418 60.000 15.93 0.00 0.00 4.79
749 2056 1.418342 CCACTACGCGAAATGACCGG 61.418 60.000 15.93 0.00 0.00 5.28
750 2057 0.457166 CACTACGCGAAATGACCGGA 60.457 55.000 15.93 0.00 0.00 5.14
751 2058 0.244450 ACTACGCGAAATGACCGGAA 59.756 50.000 15.93 0.00 0.00 4.30
752 2059 1.134907 ACTACGCGAAATGACCGGAAT 60.135 47.619 15.93 0.00 0.00 3.01
753 2060 1.257936 CTACGCGAAATGACCGGAATG 59.742 52.381 15.93 0.00 0.00 2.67
754 2061 1.297598 CGCGAAATGACCGGAATGC 60.298 57.895 9.46 0.59 0.00 3.56
755 2062 1.064134 GCGAAATGACCGGAATGCC 59.936 57.895 9.46 0.00 0.00 4.40
756 2063 1.727467 CGAAATGACCGGAATGCCC 59.273 57.895 9.46 0.00 0.00 5.36
757 2064 0.748005 CGAAATGACCGGAATGCCCT 60.748 55.000 9.46 0.00 0.00 5.19
758 2065 0.740737 GAAATGACCGGAATGCCCTG 59.259 55.000 9.46 0.00 0.00 4.45
759 2066 0.684153 AAATGACCGGAATGCCCTGG 60.684 55.000 9.46 0.00 35.58 4.45
760 2067 1.863155 AATGACCGGAATGCCCTGGT 61.863 55.000 9.46 0.00 42.02 4.00
761 2068 2.438434 GACCGGAATGCCCTGGTG 60.438 66.667 9.46 0.00 40.33 4.17
762 2069 3.995506 GACCGGAATGCCCTGGTGG 62.996 68.421 9.46 0.00 40.33 4.61
763 2070 3.727258 CCGGAATGCCCTGGTGGA 61.727 66.667 0.00 0.00 35.39 4.02
764 2071 2.124570 CGGAATGCCCTGGTGGAG 60.125 66.667 0.00 0.00 35.39 3.86
765 2072 2.276740 GGAATGCCCTGGTGGAGG 59.723 66.667 0.00 0.00 42.38 4.30
766 2073 2.616458 GGAATGCCCTGGTGGAGGT 61.616 63.158 0.00 0.00 40.87 3.85
767 2074 1.279025 GGAATGCCCTGGTGGAGGTA 61.279 60.000 0.00 0.00 40.87 3.08
768 2075 0.623723 GAATGCCCTGGTGGAGGTAA 59.376 55.000 0.00 0.00 40.87 2.85
769 2076 0.625849 AATGCCCTGGTGGAGGTAAG 59.374 55.000 0.00 0.00 40.87 2.34
770 2077 1.281925 ATGCCCTGGTGGAGGTAAGG 61.282 60.000 0.00 0.00 40.87 2.69
771 2078 1.923909 GCCCTGGTGGAGGTAAGGT 60.924 63.158 0.00 0.00 40.87 3.50
772 2079 0.619543 GCCCTGGTGGAGGTAAGGTA 60.620 60.000 0.00 0.00 40.87 3.08
773 2080 1.975196 GCCCTGGTGGAGGTAAGGTAT 60.975 57.143 0.00 0.00 40.87 2.73
774 2081 2.488836 CCCTGGTGGAGGTAAGGTATT 58.511 52.381 0.00 0.00 40.87 1.89
775 2082 2.850568 CCCTGGTGGAGGTAAGGTATTT 59.149 50.000 0.00 0.00 40.87 1.40
776 2083 4.042174 CCCTGGTGGAGGTAAGGTATTTA 58.958 47.826 0.00 0.00 40.87 1.40
777 2084 4.141551 CCCTGGTGGAGGTAAGGTATTTAC 60.142 50.000 0.00 0.00 40.87 2.01
778 2085 4.472108 CCTGGTGGAGGTAAGGTATTTACA 59.528 45.833 0.21 0.00 38.54 2.41
779 2086 5.045432 CCTGGTGGAGGTAAGGTATTTACAA 60.045 44.000 0.21 0.00 38.54 2.41
780 2087 6.353602 CCTGGTGGAGGTAAGGTATTTACAAT 60.354 42.308 0.21 0.00 38.54 2.71
781 2088 7.034967 TGGTGGAGGTAAGGTATTTACAATT 57.965 36.000 0.21 0.00 42.85 2.32
782 2089 8.160434 TGGTGGAGGTAAGGTATTTACAATTA 57.840 34.615 0.21 0.00 42.85 1.40
783 2090 8.269317 TGGTGGAGGTAAGGTATTTACAATTAG 58.731 37.037 0.21 0.00 42.85 1.73
784 2091 8.270030 GGTGGAGGTAAGGTATTTACAATTAGT 58.730 37.037 0.21 0.00 42.85 2.24
785 2092 9.676861 GTGGAGGTAAGGTATTTACAATTAGTT 57.323 33.333 0.21 0.00 42.85 2.24
786 2093 9.675464 TGGAGGTAAGGTATTTACAATTAGTTG 57.325 33.333 0.00 0.00 42.85 3.16
787 2094 8.618677 GGAGGTAAGGTATTTACAATTAGTTGC 58.381 37.037 0.00 0.00 42.85 4.17
788 2095 8.515695 AGGTAAGGTATTTACAATTAGTTGCC 57.484 34.615 0.00 0.00 42.85 4.52
789 2096 8.110908 AGGTAAGGTATTTACAATTAGTTGCCA 58.889 33.333 0.00 0.00 42.85 4.92
790 2097 8.909923 GGTAAGGTATTTACAATTAGTTGCCAT 58.090 33.333 0.00 0.00 42.85 4.40
793 2100 8.588290 AGGTATTTACAATTAGTTGCCATTGA 57.412 30.769 0.00 0.00 38.96 2.57
794 2101 9.030452 AGGTATTTACAATTAGTTGCCATTGAA 57.970 29.630 0.00 0.00 38.96 2.69
795 2102 9.646427 GGTATTTACAATTAGTTGCCATTGAAA 57.354 29.630 0.00 0.00 38.96 2.69
804 2111 8.647143 ATTAGTTGCCATTGAAATTTTATCCG 57.353 30.769 0.00 0.00 0.00 4.18
805 2112 6.279513 AGTTGCCATTGAAATTTTATCCGA 57.720 33.333 0.00 0.00 0.00 4.55
806 2113 6.099341 AGTTGCCATTGAAATTTTATCCGAC 58.901 36.000 0.00 0.00 0.00 4.79
807 2114 4.667262 TGCCATTGAAATTTTATCCGACG 58.333 39.130 0.00 0.00 0.00 5.12
808 2115 4.041723 GCCATTGAAATTTTATCCGACGG 58.958 43.478 7.84 7.84 0.00 4.79
809 2116 4.041723 CCATTGAAATTTTATCCGACGGC 58.958 43.478 9.66 0.00 0.00 5.68
810 2117 3.768468 TTGAAATTTTATCCGACGGCC 57.232 42.857 9.66 0.00 0.00 6.13
811 2118 2.018515 TGAAATTTTATCCGACGGCCC 58.981 47.619 9.66 0.00 0.00 5.80
812 2119 2.018515 GAAATTTTATCCGACGGCCCA 58.981 47.619 9.66 0.00 0.00 5.36
813 2120 1.675552 AATTTTATCCGACGGCCCAG 58.324 50.000 9.66 0.00 0.00 4.45
814 2121 0.179029 ATTTTATCCGACGGCCCAGG 60.179 55.000 9.66 0.00 0.00 4.45
815 2122 1.266160 TTTTATCCGACGGCCCAGGA 61.266 55.000 9.66 10.46 38.56 3.86
816 2123 1.963464 TTTATCCGACGGCCCAGGAC 61.963 60.000 9.66 0.00 36.81 3.85
825 2132 2.836360 GCCCAGGACGATCGGGTA 60.836 66.667 20.98 0.00 42.44 3.69
826 2133 2.428925 GCCCAGGACGATCGGGTAA 61.429 63.158 20.98 0.00 42.44 2.85
827 2134 1.440476 CCCAGGACGATCGGGTAAC 59.560 63.158 20.98 4.44 35.03 2.50
828 2135 1.041447 CCCAGGACGATCGGGTAACT 61.041 60.000 20.98 6.76 35.03 2.24
829 2136 1.683943 CCAGGACGATCGGGTAACTA 58.316 55.000 20.98 0.00 0.00 2.24
830 2137 2.236766 CCAGGACGATCGGGTAACTAT 58.763 52.381 20.98 0.00 0.00 2.12
831 2138 2.228343 CCAGGACGATCGGGTAACTATC 59.772 54.545 20.98 4.78 0.00 2.08
832 2139 2.882761 CAGGACGATCGGGTAACTATCA 59.117 50.000 20.98 0.00 0.00 2.15
833 2140 3.058155 CAGGACGATCGGGTAACTATCAG 60.058 52.174 20.98 0.00 0.00 2.90
834 2141 3.144506 GGACGATCGGGTAACTATCAGA 58.855 50.000 20.98 0.00 0.00 3.27
835 2142 3.058363 GGACGATCGGGTAACTATCAGAC 60.058 52.174 20.98 0.00 0.00 3.51
836 2143 2.547211 ACGATCGGGTAACTATCAGACG 59.453 50.000 20.98 0.00 0.00 4.18
837 2144 2.804527 CGATCGGGTAACTATCAGACGA 59.195 50.000 7.38 0.00 0.00 4.20
838 2145 3.363772 CGATCGGGTAACTATCAGACGAC 60.364 52.174 7.38 0.00 0.00 4.34
839 2146 2.292267 TCGGGTAACTATCAGACGACC 58.708 52.381 0.00 0.00 0.00 4.79
840 2147 1.336125 CGGGTAACTATCAGACGACCC 59.664 57.143 0.00 0.00 42.69 4.46
841 2148 2.381911 GGGTAACTATCAGACGACCCA 58.618 52.381 2.98 0.00 45.02 4.51
842 2149 2.100418 GGGTAACTATCAGACGACCCAC 59.900 54.545 2.98 0.00 45.02 4.61
843 2150 2.756760 GGTAACTATCAGACGACCCACA 59.243 50.000 0.00 0.00 0.00 4.17
844 2151 3.181489 GGTAACTATCAGACGACCCACAG 60.181 52.174 0.00 0.00 0.00 3.66
845 2152 0.818296 ACTATCAGACGACCCACAGC 59.182 55.000 0.00 0.00 0.00 4.40
846 2153 0.248661 CTATCAGACGACCCACAGCG 60.249 60.000 0.00 0.00 0.00 5.18
847 2154 0.678684 TATCAGACGACCCACAGCGA 60.679 55.000 0.00 0.00 0.00 4.93
848 2155 1.323271 ATCAGACGACCCACAGCGAT 61.323 55.000 0.00 0.00 0.00 4.58
849 2156 1.079819 CAGACGACCCACAGCGATT 60.080 57.895 0.00 0.00 0.00 3.34
850 2157 0.670546 CAGACGACCCACAGCGATTT 60.671 55.000 0.00 0.00 0.00 2.17
851 2158 0.670546 AGACGACCCACAGCGATTTG 60.671 55.000 0.00 0.00 0.00 2.32
852 2159 1.635663 GACGACCCACAGCGATTTGG 61.636 60.000 0.00 0.00 0.00 3.28
853 2160 1.375396 CGACCCACAGCGATTTGGA 60.375 57.895 7.58 0.00 34.46 3.53
854 2161 0.744414 CGACCCACAGCGATTTGGAT 60.744 55.000 7.58 0.00 34.46 3.41
855 2162 1.017387 GACCCACAGCGATTTGGATC 58.983 55.000 7.58 0.00 34.46 3.36
871 2178 3.209812 TCGAGATCCGACGGCCTG 61.210 66.667 9.66 0.00 43.23 4.85
872 2179 3.518998 CGAGATCCGACGGCCTGT 61.519 66.667 9.66 0.00 41.76 4.00
873 2180 2.184830 CGAGATCCGACGGCCTGTA 61.185 63.158 9.66 0.00 41.76 2.74
874 2181 1.516365 CGAGATCCGACGGCCTGTAT 61.516 60.000 9.66 0.00 41.76 2.29
875 2182 0.241481 GAGATCCGACGGCCTGTATC 59.759 60.000 9.66 6.71 0.00 2.24
876 2183 1.081376 GATCCGACGGCCTGTATCG 60.081 63.158 9.66 4.84 35.62 2.92
877 2184 3.208884 ATCCGACGGCCTGTATCGC 62.209 63.158 9.66 0.00 34.52 4.58
878 2185 4.201679 CCGACGGCCTGTATCGCA 62.202 66.667 0.00 0.00 34.52 5.10
879 2186 2.202690 CGACGGCCTGTATCGCAA 60.203 61.111 0.00 0.00 0.00 4.85
880 2187 2.230940 CGACGGCCTGTATCGCAAG 61.231 63.158 0.00 0.00 0.00 4.01
881 2188 1.883084 GACGGCCTGTATCGCAAGG 60.883 63.158 0.00 0.00 38.47 3.61
882 2189 2.292794 GACGGCCTGTATCGCAAGGA 62.293 60.000 0.00 0.00 38.47 3.36
883 2190 1.592669 CGGCCTGTATCGCAAGGAG 60.593 63.158 0.00 0.00 38.47 3.69
884 2191 1.823295 GGCCTGTATCGCAAGGAGA 59.177 57.895 0.00 0.00 38.47 3.71
885 2192 0.394565 GGCCTGTATCGCAAGGAGAT 59.605 55.000 0.00 0.00 38.47 2.75
886 2193 1.202698 GGCCTGTATCGCAAGGAGATT 60.203 52.381 0.00 0.00 38.47 2.40
887 2194 2.565841 GCCTGTATCGCAAGGAGATTT 58.434 47.619 0.00 0.00 38.47 2.17
888 2195 2.545946 GCCTGTATCGCAAGGAGATTTC 59.454 50.000 0.00 0.00 38.47 2.17
889 2196 2.797156 CCTGTATCGCAAGGAGATTTCG 59.203 50.000 0.00 0.00 38.47 3.46
890 2197 3.490933 CCTGTATCGCAAGGAGATTTCGA 60.491 47.826 0.00 0.00 38.47 3.71
891 2198 4.302455 CTGTATCGCAAGGAGATTTCGAT 58.698 43.478 0.00 0.00 41.83 3.59
892 2199 4.299155 TGTATCGCAAGGAGATTTCGATC 58.701 43.478 0.00 0.00 39.99 3.69
893 2200 2.225068 TCGCAAGGAGATTTCGATCC 57.775 50.000 0.00 0.00 35.71 3.36
894 2201 0.855349 CGCAAGGAGATTTCGATCCG 59.145 55.000 0.00 0.00 40.73 4.18
895 2202 1.536072 CGCAAGGAGATTTCGATCCGA 60.536 52.381 0.00 0.00 40.73 4.55
896 2203 1.861575 GCAAGGAGATTTCGATCCGAC 59.138 52.381 0.00 0.00 40.73 4.79
897 2204 2.120232 CAAGGAGATTTCGATCCGACG 58.880 52.381 0.00 0.00 40.73 5.12
898 2205 0.669077 AGGAGATTTCGATCCGACGG 59.331 55.000 7.84 7.84 40.73 4.79
899 2206 0.384669 GGAGATTTCGATCCGACGGT 59.615 55.000 14.79 0.67 34.89 4.83
900 2207 1.599916 GGAGATTTCGATCCGACGGTC 60.600 57.143 14.79 9.85 34.89 4.79
901 2208 0.384669 AGATTTCGATCCGACGGTCC 59.615 55.000 14.79 6.01 34.89 4.46
902 2209 0.101759 GATTTCGATCCGACGGTCCA 59.898 55.000 14.79 0.00 34.89 4.02
903 2210 0.102481 ATTTCGATCCGACGGTCCAG 59.898 55.000 14.79 4.52 34.89 3.86
904 2211 0.961857 TTTCGATCCGACGGTCCAGA 60.962 55.000 14.79 6.88 34.89 3.86
905 2212 0.961857 TTCGATCCGACGGTCCAGAA 60.962 55.000 14.79 12.32 34.89 3.02
906 2213 0.750546 TCGATCCGACGGTCCAGAAT 60.751 55.000 14.79 0.00 0.00 2.40
907 2214 0.317938 CGATCCGACGGTCCAGAATC 60.318 60.000 14.79 7.33 0.00 2.52
908 2215 0.032267 GATCCGACGGTCCAGAATCC 59.968 60.000 14.79 0.00 0.00 3.01
909 2216 0.686441 ATCCGACGGTCCAGAATCCA 60.686 55.000 14.79 0.00 0.00 3.41
910 2217 0.901114 TCCGACGGTCCAGAATCCAA 60.901 55.000 14.79 0.00 0.00 3.53
911 2218 0.036765 CCGACGGTCCAGAATCCAAA 60.037 55.000 5.48 0.00 0.00 3.28
912 2219 1.076332 CGACGGTCCAGAATCCAAAC 58.924 55.000 1.91 0.00 0.00 2.93
913 2220 1.076332 GACGGTCCAGAATCCAAACG 58.924 55.000 0.00 0.00 0.00 3.60
914 2221 0.953960 ACGGTCCAGAATCCAAACGC 60.954 55.000 0.00 0.00 0.00 4.84
915 2222 0.953471 CGGTCCAGAATCCAAACGCA 60.953 55.000 0.00 0.00 0.00 5.24
916 2223 0.521735 GGTCCAGAATCCAAACGCAC 59.478 55.000 0.00 0.00 0.00 5.34
917 2224 0.165944 GTCCAGAATCCAAACGCACG 59.834 55.000 0.00 0.00 0.00 5.34
918 2225 0.953471 TCCAGAATCCAAACGCACGG 60.953 55.000 0.00 0.00 0.00 4.94
919 2226 1.501741 CAGAATCCAAACGCACGGG 59.498 57.895 0.00 0.00 0.00 5.28
920 2227 0.953471 CAGAATCCAAACGCACGGGA 60.953 55.000 0.00 0.00 34.70 5.14
921 2228 0.673644 AGAATCCAAACGCACGGGAG 60.674 55.000 0.00 0.00 33.47 4.30
922 2229 0.672401 GAATCCAAACGCACGGGAGA 60.672 55.000 0.00 0.00 33.47 3.71
923 2230 0.673644 AATCCAAACGCACGGGAGAG 60.674 55.000 0.00 0.00 33.47 3.20
924 2231 3.423154 CCAAACGCACGGGAGAGC 61.423 66.667 0.00 0.00 43.27 4.09
925 2232 2.357517 CAAACGCACGGGAGAGCT 60.358 61.111 0.00 0.00 44.57 4.09
926 2233 2.048127 AAACGCACGGGAGAGCTC 60.048 61.111 5.27 5.27 44.57 4.09
938 2245 2.015736 GAGAGCTCCATTTCGCTTCA 57.984 50.000 10.93 0.00 36.45 3.02
939 2246 1.932511 GAGAGCTCCATTTCGCTTCAG 59.067 52.381 10.93 0.00 36.45 3.02
940 2247 1.552337 AGAGCTCCATTTCGCTTCAGA 59.448 47.619 10.93 0.00 36.45 3.27
941 2248 1.663135 GAGCTCCATTTCGCTTCAGAC 59.337 52.381 0.87 0.00 36.45 3.51
942 2249 1.277557 AGCTCCATTTCGCTTCAGACT 59.722 47.619 0.00 0.00 31.17 3.24
943 2250 1.663135 GCTCCATTTCGCTTCAGACTC 59.337 52.381 0.00 0.00 0.00 3.36
944 2251 2.676463 GCTCCATTTCGCTTCAGACTCT 60.676 50.000 0.00 0.00 0.00 3.24
945 2252 3.429547 GCTCCATTTCGCTTCAGACTCTA 60.430 47.826 0.00 0.00 0.00 2.43
946 2253 4.748892 CTCCATTTCGCTTCAGACTCTAA 58.251 43.478 0.00 0.00 0.00 2.10
947 2254 4.495422 TCCATTTCGCTTCAGACTCTAAC 58.505 43.478 0.00 0.00 0.00 2.34
948 2255 4.021456 TCCATTTCGCTTCAGACTCTAACA 60.021 41.667 0.00 0.00 0.00 2.41
949 2256 4.690748 CCATTTCGCTTCAGACTCTAACAA 59.309 41.667 0.00 0.00 0.00 2.83
950 2257 5.163913 CCATTTCGCTTCAGACTCTAACAAG 60.164 44.000 0.00 0.00 0.00 3.16
951 2258 3.577649 TCGCTTCAGACTCTAACAAGG 57.422 47.619 0.00 0.00 0.00 3.61
952 2259 2.231478 TCGCTTCAGACTCTAACAAGGG 59.769 50.000 0.00 0.00 0.00 3.95
953 2260 2.675317 CGCTTCAGACTCTAACAAGGGG 60.675 54.545 0.00 0.00 0.00 4.79
954 2261 2.567615 GCTTCAGACTCTAACAAGGGGA 59.432 50.000 0.00 0.00 0.00 4.81
955 2262 3.198853 GCTTCAGACTCTAACAAGGGGAT 59.801 47.826 0.00 0.00 0.00 3.85
956 2263 4.406003 GCTTCAGACTCTAACAAGGGGATA 59.594 45.833 0.00 0.00 0.00 2.59
957 2264 5.682730 GCTTCAGACTCTAACAAGGGGATAC 60.683 48.000 0.00 0.00 0.00 2.24
958 2265 5.208294 TCAGACTCTAACAAGGGGATACT 57.792 43.478 0.00 0.00 0.00 2.12
959 2266 5.202004 TCAGACTCTAACAAGGGGATACTC 58.798 45.833 0.00 0.00 37.29 2.59
970 2277 2.069273 GGGGATACTCGATTGCATTCG 58.931 52.381 21.75 21.75 40.46 3.34
1125 2432 1.136329 ACCAGATCCACCAGCACCTT 61.136 55.000 0.00 0.00 0.00 3.50
1503 2810 3.785859 ATGATGGCGCTCACCCGT 61.786 61.111 7.64 0.00 0.00 5.28
1563 2870 2.819595 CCGCCGAGTTCACCATGG 60.820 66.667 11.19 11.19 0.00 3.66
1564 2871 2.047274 CGCCGAGTTCACCATGGT 60.047 61.111 13.00 13.00 0.00 3.55
1569 2876 2.504367 CCGAGTTCACCATGGTTTTCT 58.496 47.619 16.84 13.17 0.00 2.52
1573 2880 4.739716 CGAGTTCACCATGGTTTTCTTTTG 59.260 41.667 16.84 0.85 0.00 2.44
1574 2881 5.022282 AGTTCACCATGGTTTTCTTTTGG 57.978 39.130 16.84 0.00 0.00 3.28
1764 3097 2.956964 GTCGATCTTCCGGCTGCG 60.957 66.667 0.00 0.00 0.00 5.18
1802 3135 2.105006 TTCACCTGATCTGCTCTTGC 57.895 50.000 0.00 0.00 40.20 4.01
1840 3177 2.240279 GAGACGGGTGTATGGATAGCT 58.760 52.381 0.00 0.00 0.00 3.32
1844 3181 1.435256 GGGTGTATGGATAGCTGGGT 58.565 55.000 0.00 0.00 0.00 4.51
1912 3254 1.996191 GAAATGGAGTGAGTGCTCGAC 59.004 52.381 0.00 0.00 36.41 4.20
1913 3255 1.261480 AATGGAGTGAGTGCTCGACT 58.739 50.000 4.73 4.73 37.76 4.18
1924 3271 2.166664 AGTGCTCGACTAATGACTTCCC 59.833 50.000 0.00 0.00 30.86 3.97
1930 3277 5.123979 GCTCGACTAATGACTTCCCAAAAAT 59.876 40.000 0.00 0.00 0.00 1.82
1932 3279 7.148306 GCTCGACTAATGACTTCCCAAAAATAA 60.148 37.037 0.00 0.00 0.00 1.40
1948 3296 4.367039 AAATAATATAGGCAGTGGCGGT 57.633 40.909 11.51 6.57 42.47 5.68
1950 3298 0.837272 AATATAGGCAGTGGCGGTGT 59.163 50.000 11.51 0.00 42.47 4.16
2114 3467 9.643693 ACAACATCTGCTTTCATATTTTTAAGG 57.356 29.630 0.00 0.00 0.00 2.69
2119 3472 9.632638 ATCTGCTTTCATATTTTTAAGGAGCTA 57.367 29.630 0.00 0.00 36.41 3.32
2137 3490 7.562135 AGGAGCTAAAACTAATATTCGTTCCA 58.438 34.615 5.88 0.00 0.00 3.53
2138 3491 8.044908 AGGAGCTAAAACTAATATTCGTTCCAA 58.955 33.333 5.88 0.00 0.00 3.53
2139 3492 8.671028 GGAGCTAAAACTAATATTCGTTCCAAA 58.329 33.333 5.88 0.00 0.00 3.28
2153 3506 8.980481 ATTCGTTCCAAAATAGATGACCTAAT 57.020 30.769 0.00 0.00 0.00 1.73
2155 3508 8.801882 TCGTTCCAAAATAGATGACCTAATTT 57.198 30.769 0.00 0.00 32.23 1.82
2156 3509 9.238368 TCGTTCCAAAATAGATGACCTAATTTT 57.762 29.630 0.00 0.00 30.22 1.82
2239 3742 9.445786 AACAACAAATACTACTGAAAACGAATG 57.554 29.630 0.00 0.00 0.00 2.67
2278 3790 7.572539 GCACAACAATACTAGTGAAAACTACCC 60.573 40.741 5.39 0.00 33.99 3.69
2306 3821 8.791355 AAACAAATCCGAAAACATGTACTTAC 57.209 30.769 0.00 0.00 0.00 2.34
2331 3846 6.811170 CGGAAACAACAAATAACCTTATGCAT 59.189 34.615 3.79 3.79 0.00 3.96
2332 3847 7.201427 CGGAAACAACAAATAACCTTATGCATG 60.201 37.037 10.16 0.00 0.00 4.06
2392 4157 7.753659 TCACAAAGTGAAACGAATACAGAAAA 58.246 30.769 0.00 0.00 45.86 2.29
2393 4158 8.237949 TCACAAAGTGAAACGAATACAGAAAAA 58.762 29.630 0.00 0.00 45.86 1.94
2395 4160 8.024285 ACAAAGTGAAACGAATACAGAAAAACA 58.976 29.630 0.00 0.00 45.86 2.83
2396 4161 8.855279 CAAAGTGAAACGAATACAGAAAAACAA 58.145 29.630 0.00 0.00 45.86 2.83
2397 4162 9.581099 AAAGTGAAACGAATACAGAAAAACAAT 57.419 25.926 0.00 0.00 45.86 2.71
2442 4449 9.902196 AAAAACAAAGTAACAAATACTATCGGG 57.098 29.630 0.00 0.00 44.22 5.14
2443 4450 7.619964 AACAAAGTAACAAATACTATCGGGG 57.380 36.000 0.00 0.00 44.22 5.73
2468 4475 7.305993 GGAAGAAAACAAAGCAAATACGACAAG 60.306 37.037 0.00 0.00 0.00 3.16
2475 4482 7.254852 ACAAAGCAAATACGACAAGAAAAAGA 58.745 30.769 0.00 0.00 0.00 2.52
2476 4483 7.432252 ACAAAGCAAATACGACAAGAAAAAGAG 59.568 33.333 0.00 0.00 0.00 2.85
2480 4487 6.603095 CAAATACGACAAGAAAAAGAGGAGG 58.397 40.000 0.00 0.00 0.00 4.30
2499 4506 8.506083 AGAGGAGGAAACCAATACAATATTCAT 58.494 33.333 0.00 0.00 0.00 2.57
2547 4554 4.507756 GGCATTTTTGAGAAACCACACTTC 59.492 41.667 0.00 0.00 0.00 3.01
2548 4555 5.108517 GCATTTTTGAGAAACCACACTTCA 58.891 37.500 0.00 0.00 0.00 3.02
2604 4611 6.436843 AAACTATGGCATAACAGTGTTAGC 57.563 37.500 19.87 20.11 0.00 3.09
2610 4617 4.215399 TGGCATAACAGTGTTAGCTCAAAC 59.785 41.667 24.13 14.56 0.00 2.93
2625 4632 3.682858 GCTCAAACCGTAAATAGTGCTCA 59.317 43.478 0.00 0.00 0.00 4.26
2626 4633 4.201724 GCTCAAACCGTAAATAGTGCTCAG 60.202 45.833 0.00 0.00 0.00 3.35
2638 4645 3.000684 AGTGCTCAGGTGACGATACTA 57.999 47.619 0.00 0.00 0.00 1.82
2682 4689 2.175499 ACATGGGCCAGCATGTAATAGT 59.825 45.455 21.86 1.24 39.91 2.12
2705 4712 2.747446 GGCTAACATATGGGCCATAACG 59.253 50.000 28.85 23.50 43.59 3.18
2714 4721 1.227556 GGCCATAACGAGTGCGGAT 60.228 57.895 0.00 0.00 43.17 4.18
2729 4736 6.642950 CGAGTGCGGATAAGAGAGAAATTATT 59.357 38.462 0.00 0.00 0.00 1.40
2730 4737 7.808381 CGAGTGCGGATAAGAGAGAAATTATTA 59.192 37.037 0.00 0.00 0.00 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 5.048782 TCCATGCAGTACAAACACTCAATTC 60.049 40.000 0.00 0.00 0.00 2.17
226 1521 2.155194 GCGACGAGCTGTGCTACTG 61.155 63.158 0.00 0.00 39.88 2.74
307 1614 2.583593 GTTAGGAGGCAGCGCTCG 60.584 66.667 7.13 4.46 0.00 5.03
353 1660 3.508840 CCCGAATCCGTTGGCTGC 61.509 66.667 0.00 0.00 0.00 5.25
354 1661 2.824041 CCCCGAATCCGTTGGCTG 60.824 66.667 0.00 0.00 0.00 4.85
355 1662 3.006728 TCCCCGAATCCGTTGGCT 61.007 61.111 0.00 0.00 0.00 4.75
356 1663 2.822701 GTCCCCGAATCCGTTGGC 60.823 66.667 0.00 0.00 0.00 4.52
357 1664 2.124860 GGTCCCCGAATCCGTTGG 60.125 66.667 0.00 0.00 0.00 3.77
376 1683 4.552365 AGGATGGGCGCCACATCG 62.552 66.667 32.95 0.00 44.34 3.84
377 1684 2.592861 GAGGATGGGCGCCACATC 60.593 66.667 32.86 32.86 43.04 3.06
378 1685 4.195334 GGAGGATGGGCGCCACAT 62.195 66.667 30.85 27.26 35.80 3.21
426 1733 3.562779 TTCCACGGGTTCTCGTCGC 62.563 63.158 0.00 0.00 41.86 5.19
427 1734 1.443872 CTTCCACGGGTTCTCGTCG 60.444 63.158 0.00 0.00 41.86 5.12
428 1735 1.737008 GCTTCCACGGGTTCTCGTC 60.737 63.158 0.00 0.00 41.86 4.20
429 1736 2.342648 GCTTCCACGGGTTCTCGT 59.657 61.111 0.00 0.00 44.91 4.18
430 1737 2.027625 GTGCTTCCACGGGTTCTCG 61.028 63.158 0.00 0.00 31.34 4.04
431 1738 3.967715 GTGCTTCCACGGGTTCTC 58.032 61.111 0.00 0.00 31.34 2.87
439 1746 4.666532 GTGTGCGCGTGCTTCCAC 62.667 66.667 23.16 20.16 43.34 4.02
462 1769 3.522731 CAGAGAGGGAGGGCGTCG 61.523 72.222 0.53 0.00 0.00 5.12
463 1770 3.151022 CCAGAGAGGGAGGGCGTC 61.151 72.222 0.00 0.00 0.00 5.19
464 1771 3.966930 GACCAGAGAGGGAGGGCGT 62.967 68.421 0.00 0.00 43.89 5.68
465 1772 3.151022 GACCAGAGAGGGAGGGCG 61.151 72.222 0.00 0.00 43.89 6.13
466 1773 3.151022 CGACCAGAGAGGGAGGGC 61.151 72.222 0.00 0.00 43.89 5.19
467 1774 3.151022 GCGACCAGAGAGGGAGGG 61.151 72.222 0.00 0.00 43.89 4.30
468 1775 1.671901 GAAGCGACCAGAGAGGGAGG 61.672 65.000 0.00 0.00 43.89 4.30
469 1776 1.671901 GGAAGCGACCAGAGAGGGAG 61.672 65.000 0.00 0.00 43.89 4.30
470 1777 1.682684 GGAAGCGACCAGAGAGGGA 60.683 63.158 0.00 0.00 43.89 4.20
471 1778 1.671901 GAGGAAGCGACCAGAGAGGG 61.672 65.000 5.15 0.00 43.89 4.30
472 1779 1.671901 GGAGGAAGCGACCAGAGAGG 61.672 65.000 5.15 0.00 45.67 3.69
473 1780 0.967887 TGGAGGAAGCGACCAGAGAG 60.968 60.000 5.15 0.00 0.00 3.20
474 1781 1.076727 TGGAGGAAGCGACCAGAGA 59.923 57.895 5.15 0.00 0.00 3.10
475 1782 1.216710 GTGGAGGAAGCGACCAGAG 59.783 63.158 5.15 0.00 34.21 3.35
476 1783 1.118965 TTGTGGAGGAAGCGACCAGA 61.119 55.000 5.15 0.00 34.21 3.86
477 1784 0.951040 GTTGTGGAGGAAGCGACCAG 60.951 60.000 5.15 0.00 34.21 4.00
478 1785 1.070786 GTTGTGGAGGAAGCGACCA 59.929 57.895 5.15 0.00 0.00 4.02
479 1786 2.027625 CGTTGTGGAGGAAGCGACC 61.028 63.158 0.00 0.00 0.00 4.79
480 1787 2.668280 GCGTTGTGGAGGAAGCGAC 61.668 63.158 0.00 0.00 0.00 5.19
481 1788 2.357034 GCGTTGTGGAGGAAGCGA 60.357 61.111 0.00 0.00 0.00 4.93
482 1789 3.777925 CGCGTTGTGGAGGAAGCG 61.778 66.667 0.00 0.00 41.56 4.68
483 1790 2.665185 ACGCGTTGTGGAGGAAGC 60.665 61.111 5.58 0.00 0.00 3.86
484 1791 2.372690 CGACGCGTTGTGGAGGAAG 61.373 63.158 15.53 0.00 0.00 3.46
485 1792 2.355363 CGACGCGTTGTGGAGGAA 60.355 61.111 15.53 0.00 0.00 3.36
486 1793 4.351938 CCGACGCGTTGTGGAGGA 62.352 66.667 24.28 0.00 0.00 3.71
488 1795 3.271706 TACCCGACGCGTTGTGGAG 62.272 63.158 29.53 19.79 0.00 3.86
489 1796 3.271706 CTACCCGACGCGTTGTGGA 62.272 63.158 29.53 15.88 0.00 4.02
490 1797 2.807895 CTACCCGACGCGTTGTGG 60.808 66.667 24.28 24.25 0.00 4.17
491 1798 2.807895 CCTACCCGACGCGTTGTG 60.808 66.667 24.28 16.47 0.00 3.33
492 1799 3.297620 ACCTACCCGACGCGTTGT 61.298 61.111 24.28 18.30 0.00 3.32
493 1800 2.807895 CACCTACCCGACGCGTTG 60.808 66.667 19.89 19.89 0.00 4.10
494 1801 4.060038 CCACCTACCCGACGCGTT 62.060 66.667 15.53 0.00 0.00 4.84
499 1806 4.446413 CACCGCCACCTACCCGAC 62.446 72.222 0.00 0.00 0.00 4.79
500 1807 3.968837 ATCACCGCCACCTACCCGA 62.969 63.158 0.00 0.00 0.00 5.14
501 1808 3.467226 ATCACCGCCACCTACCCG 61.467 66.667 0.00 0.00 0.00 5.28
502 1809 2.189521 CATCACCGCCACCTACCC 59.810 66.667 0.00 0.00 0.00 3.69
503 1810 2.189521 CCATCACCGCCACCTACC 59.810 66.667 0.00 0.00 0.00 3.18
504 1811 2.513897 GCCATCACCGCCACCTAC 60.514 66.667 0.00 0.00 0.00 3.18
505 1812 4.155733 CGCCATCACCGCCACCTA 62.156 66.667 0.00 0.00 0.00 3.08
533 1840 3.866582 CATCCTCCCTGCCCGTCC 61.867 72.222 0.00 0.00 0.00 4.79
534 1841 3.866582 CCATCCTCCCTGCCCGTC 61.867 72.222 0.00 0.00 0.00 4.79
537 1844 4.201122 CAGCCATCCTCCCTGCCC 62.201 72.222 0.00 0.00 0.00 5.36
538 1845 4.201122 CCAGCCATCCTCCCTGCC 62.201 72.222 0.00 0.00 0.00 4.85
539 1846 4.891037 GCCAGCCATCCTCCCTGC 62.891 72.222 0.00 0.00 0.00 4.85
540 1847 4.559063 CGCCAGCCATCCTCCCTG 62.559 72.222 0.00 0.00 0.00 4.45
547 1854 4.864334 CACTCCCCGCCAGCCATC 62.864 72.222 0.00 0.00 0.00 3.51
555 1862 4.208686 CTAGCCGTCACTCCCCGC 62.209 72.222 0.00 0.00 0.00 6.13
556 1863 3.528370 CCTAGCCGTCACTCCCCG 61.528 72.222 0.00 0.00 0.00 5.73
557 1864 3.155167 CCCTAGCCGTCACTCCCC 61.155 72.222 0.00 0.00 0.00 4.81
558 1865 1.957765 GAACCCTAGCCGTCACTCCC 61.958 65.000 0.00 0.00 0.00 4.30
559 1866 1.255667 TGAACCCTAGCCGTCACTCC 61.256 60.000 0.00 0.00 0.00 3.85
560 1867 0.606604 TTGAACCCTAGCCGTCACTC 59.393 55.000 0.00 0.00 0.00 3.51
561 1868 1.207329 GATTGAACCCTAGCCGTCACT 59.793 52.381 0.00 0.00 0.00 3.41
562 1869 1.653151 GATTGAACCCTAGCCGTCAC 58.347 55.000 0.00 0.00 0.00 3.67
563 1870 0.174845 CGATTGAACCCTAGCCGTCA 59.825 55.000 0.00 0.00 0.00 4.35
564 1871 1.152383 GCGATTGAACCCTAGCCGTC 61.152 60.000 0.00 0.00 0.00 4.79
565 1872 1.153429 GCGATTGAACCCTAGCCGT 60.153 57.895 0.00 0.00 0.00 5.68
566 1873 2.237751 CGCGATTGAACCCTAGCCG 61.238 63.158 0.00 0.00 0.00 5.52
567 1874 1.887707 CCGCGATTGAACCCTAGCC 60.888 63.158 8.23 0.00 0.00 3.93
568 1875 0.743345 AACCGCGATTGAACCCTAGC 60.743 55.000 8.23 0.00 0.00 3.42
569 1876 1.287425 GAACCGCGATTGAACCCTAG 58.713 55.000 8.23 0.00 0.00 3.02
570 1877 0.458889 CGAACCGCGATTGAACCCTA 60.459 55.000 8.23 0.00 44.57 3.53
571 1878 1.740296 CGAACCGCGATTGAACCCT 60.740 57.895 8.23 0.00 44.57 4.34
572 1879 1.738830 TCGAACCGCGATTGAACCC 60.739 57.895 8.23 0.00 45.59 4.11
573 1880 3.864944 TCGAACCGCGATTGAACC 58.135 55.556 8.23 0.00 45.59 3.62
581 1888 4.796231 CCACCTCCTCGAACCGCG 62.796 72.222 0.00 0.00 42.69 6.46
582 1889 4.452733 CCCACCTCCTCGAACCGC 62.453 72.222 0.00 0.00 0.00 5.68
583 1890 2.995574 ACCCACCTCCTCGAACCG 60.996 66.667 0.00 0.00 0.00 4.44
584 1891 2.663196 CACCCACCTCCTCGAACC 59.337 66.667 0.00 0.00 0.00 3.62
585 1892 2.663196 CCACCCACCTCCTCGAAC 59.337 66.667 0.00 0.00 0.00 3.95
586 1893 3.319198 GCCACCCACCTCCTCGAA 61.319 66.667 0.00 0.00 0.00 3.71
612 1919 2.159819 CTATCCTCCCACCCGCATCG 62.160 65.000 0.00 0.00 0.00 3.84
613 1920 1.674057 CTATCCTCCCACCCGCATC 59.326 63.158 0.00 0.00 0.00 3.91
614 1921 1.843376 CCTATCCTCCCACCCGCAT 60.843 63.158 0.00 0.00 0.00 4.73
615 1922 2.445845 CCTATCCTCCCACCCGCA 60.446 66.667 0.00 0.00 0.00 5.69
616 1923 2.122989 TCCTATCCTCCCACCCGC 60.123 66.667 0.00 0.00 0.00 6.13
617 1924 1.534235 CCTCCTATCCTCCCACCCG 60.534 68.421 0.00 0.00 0.00 5.28
618 1925 1.843832 GCCTCCTATCCTCCCACCC 60.844 68.421 0.00 0.00 0.00 4.61
619 1926 2.210711 CGCCTCCTATCCTCCCACC 61.211 68.421 0.00 0.00 0.00 4.61
620 1927 2.873525 GCGCCTCCTATCCTCCCAC 61.874 68.421 0.00 0.00 0.00 4.61
621 1928 2.524394 GCGCCTCCTATCCTCCCA 60.524 66.667 0.00 0.00 0.00 4.37
622 1929 3.686045 CGCGCCTCCTATCCTCCC 61.686 72.222 0.00 0.00 0.00 4.30
623 1930 4.365505 GCGCGCCTCCTATCCTCC 62.366 72.222 23.24 0.00 0.00 4.30
624 1931 4.708968 CGCGCGCCTCCTATCCTC 62.709 72.222 27.72 0.00 0.00 3.71
640 1947 4.548513 CTCCCTCCCTCCCTCCCG 62.549 77.778 0.00 0.00 0.00 5.14
641 1948 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
642 1949 4.890306 GCCTCCCTCCCTCCCTCC 62.890 77.778 0.00 0.00 0.00 4.30
662 1969 4.465446 TCTCCCTCCCTCCCGCAG 62.465 72.222 0.00 0.00 0.00 5.18
663 1970 4.465446 CTCTCCCTCCCTCCCGCA 62.465 72.222 0.00 0.00 0.00 5.69
664 1971 4.144727 TCTCTCCCTCCCTCCCGC 62.145 72.222 0.00 0.00 0.00 6.13
665 1972 2.197324 CTCTCTCCCTCCCTCCCG 59.803 72.222 0.00 0.00 0.00 5.14
666 1973 2.015726 TCCTCTCTCCCTCCCTCCC 61.016 68.421 0.00 0.00 0.00 4.30
667 1974 1.541672 CTCCTCTCTCCCTCCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
668 1975 0.996762 TCCTCCTCTCTCCCTCCCTC 60.997 65.000 0.00 0.00 0.00 4.30
669 1976 0.998945 CTCCTCCTCTCTCCCTCCCT 60.999 65.000 0.00 0.00 0.00 4.20
670 1977 1.541672 CTCCTCCTCTCTCCCTCCC 59.458 68.421 0.00 0.00 0.00 4.30
671 1978 1.541672 CCTCCTCCTCTCTCCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
672 1979 1.152546 GCCTCCTCCTCTCTCCCTC 60.153 68.421 0.00 0.00 0.00 4.30
673 1980 3.024217 GCCTCCTCCTCTCTCCCT 58.976 66.667 0.00 0.00 0.00 4.20
674 1981 2.520741 CGCCTCCTCCTCTCTCCC 60.521 72.222 0.00 0.00 0.00 4.30
675 1982 2.520741 CCGCCTCCTCCTCTCTCC 60.521 72.222 0.00 0.00 0.00 3.71
676 1983 2.346284 TAGCCGCCTCCTCCTCTCTC 62.346 65.000 0.00 0.00 0.00 3.20
677 1984 2.351924 CTAGCCGCCTCCTCCTCTCT 62.352 65.000 0.00 0.00 0.00 3.10
678 1985 1.901464 CTAGCCGCCTCCTCCTCTC 60.901 68.421 0.00 0.00 0.00 3.20
679 1986 2.197324 CTAGCCGCCTCCTCCTCT 59.803 66.667 0.00 0.00 0.00 3.69
680 1987 2.915137 CCTAGCCGCCTCCTCCTC 60.915 72.222 0.00 0.00 0.00 3.71
681 1988 3.742248 GACCTAGCCGCCTCCTCCT 62.742 68.421 0.00 0.00 0.00 3.69
682 1989 3.228017 GACCTAGCCGCCTCCTCC 61.228 72.222 0.00 0.00 0.00 4.30
683 1990 2.123640 AGACCTAGCCGCCTCCTC 60.124 66.667 0.00 0.00 0.00 3.71
684 1991 2.123640 GAGACCTAGCCGCCTCCT 60.124 66.667 0.00 0.00 0.00 3.69
685 1992 3.228017 GGAGACCTAGCCGCCTCC 61.228 72.222 0.00 0.00 38.47 4.30
686 1993 2.442272 TGGAGACCTAGCCGCCTC 60.442 66.667 5.14 0.00 0.00 4.70
687 1994 2.760385 GTGGAGACCTAGCCGCCT 60.760 66.667 5.14 0.00 0.00 5.52
688 1995 3.851128 GGTGGAGACCTAGCCGCC 61.851 72.222 0.00 0.00 46.53 6.13
689 1996 3.075005 TGGTGGAGACCTAGCCGC 61.075 66.667 0.00 0.00 43.58 6.53
690 1997 1.949847 CTGTGGTGGAGACCTAGCCG 61.950 65.000 0.00 0.00 43.58 5.52
691 1998 1.617947 CCTGTGGTGGAGACCTAGCC 61.618 65.000 0.00 0.00 43.58 3.93
692 1999 0.614979 TCCTGTGGTGGAGACCTAGC 60.615 60.000 0.00 0.00 43.58 3.42
693 2000 3.691820 TCCTGTGGTGGAGACCTAG 57.308 57.895 0.00 0.00 43.58 3.02
716 2023 2.105306 CGTAGTGGGGTATAAAAGGGGG 59.895 54.545 0.00 0.00 0.00 5.40
717 2024 2.486013 GCGTAGTGGGGTATAAAAGGGG 60.486 54.545 0.00 0.00 0.00 4.79
718 2025 2.804212 CGCGTAGTGGGGTATAAAAGGG 60.804 54.545 0.00 0.00 0.00 3.95
719 2026 2.101249 TCGCGTAGTGGGGTATAAAAGG 59.899 50.000 5.77 0.00 39.32 3.11
720 2027 3.441496 TCGCGTAGTGGGGTATAAAAG 57.559 47.619 5.77 0.00 39.32 2.27
721 2028 3.883830 TTCGCGTAGTGGGGTATAAAA 57.116 42.857 5.77 0.00 39.32 1.52
722 2029 3.883830 TTTCGCGTAGTGGGGTATAAA 57.116 42.857 5.77 0.00 39.32 1.40
723 2030 3.384146 TCATTTCGCGTAGTGGGGTATAA 59.616 43.478 5.77 0.00 39.32 0.98
724 2031 2.957680 TCATTTCGCGTAGTGGGGTATA 59.042 45.455 5.77 0.00 39.32 1.47
725 2032 1.758280 TCATTTCGCGTAGTGGGGTAT 59.242 47.619 5.77 0.00 39.32 2.73
726 2033 1.135024 GTCATTTCGCGTAGTGGGGTA 60.135 52.381 5.77 0.00 39.32 3.69
727 2034 0.390735 GTCATTTCGCGTAGTGGGGT 60.391 55.000 5.77 0.00 39.32 4.95
728 2035 1.087771 GGTCATTTCGCGTAGTGGGG 61.088 60.000 5.77 0.00 39.32 4.96
729 2036 1.418342 CGGTCATTTCGCGTAGTGGG 61.418 60.000 5.77 0.00 39.32 4.61
730 2037 1.418342 CCGGTCATTTCGCGTAGTGG 61.418 60.000 5.77 0.00 39.32 4.00
731 2038 0.457166 TCCGGTCATTTCGCGTAGTG 60.457 55.000 5.77 3.46 40.84 2.74
732 2039 0.244450 TTCCGGTCATTTCGCGTAGT 59.756 50.000 5.77 0.00 0.00 2.73
733 2040 1.257936 CATTCCGGTCATTTCGCGTAG 59.742 52.381 5.77 0.00 0.00 3.51
734 2041 1.282817 CATTCCGGTCATTTCGCGTA 58.717 50.000 5.77 0.00 0.00 4.42
735 2042 1.977594 GCATTCCGGTCATTTCGCGT 61.978 55.000 5.77 0.00 0.00 6.01
736 2043 1.297598 GCATTCCGGTCATTTCGCG 60.298 57.895 0.00 0.00 0.00 5.87
737 2044 1.064134 GGCATTCCGGTCATTTCGC 59.936 57.895 0.00 0.00 0.00 4.70
738 2045 0.748005 AGGGCATTCCGGTCATTTCG 60.748 55.000 0.00 0.00 41.52 3.46
739 2046 0.740737 CAGGGCATTCCGGTCATTTC 59.259 55.000 0.00 0.00 41.52 2.17
740 2047 0.684153 CCAGGGCATTCCGGTCATTT 60.684 55.000 0.00 0.00 41.52 2.32
741 2048 1.076777 CCAGGGCATTCCGGTCATT 60.077 57.895 0.00 0.00 41.52 2.57
742 2049 2.308722 ACCAGGGCATTCCGGTCAT 61.309 57.895 0.00 0.00 37.72 3.06
743 2050 2.933287 ACCAGGGCATTCCGGTCA 60.933 61.111 0.00 0.00 37.72 4.02
744 2051 2.438434 CACCAGGGCATTCCGGTC 60.438 66.667 0.00 0.00 39.32 4.79
745 2052 4.047125 CCACCAGGGCATTCCGGT 62.047 66.667 0.00 0.00 41.04 5.28
746 2053 3.704231 CTCCACCAGGGCATTCCGG 62.704 68.421 0.00 0.00 41.52 5.14
747 2054 2.124570 CTCCACCAGGGCATTCCG 60.125 66.667 0.00 0.00 41.52 4.30
748 2055 2.276740 CCTCCACCAGGGCATTCC 59.723 66.667 0.00 0.00 38.91 3.01
756 2063 5.687166 TGTAAATACCTTACCTCCACCAG 57.313 43.478 0.00 0.00 39.43 4.00
757 2064 6.645884 ATTGTAAATACCTTACCTCCACCA 57.354 37.500 0.00 0.00 39.43 4.17
758 2065 8.270030 ACTAATTGTAAATACCTTACCTCCACC 58.730 37.037 0.00 0.00 39.43 4.61
759 2066 9.676861 AACTAATTGTAAATACCTTACCTCCAC 57.323 33.333 0.00 0.00 39.43 4.02
760 2067 9.675464 CAACTAATTGTAAATACCTTACCTCCA 57.325 33.333 0.00 0.00 39.43 3.86
761 2068 8.618677 GCAACTAATTGTAAATACCTTACCTCC 58.381 37.037 0.00 0.00 39.43 4.30
762 2069 8.618677 GGCAACTAATTGTAAATACCTTACCTC 58.381 37.037 0.00 0.00 39.43 3.85
763 2070 8.110908 TGGCAACTAATTGTAAATACCTTACCT 58.889 33.333 0.00 0.00 37.29 3.08
764 2071 8.283699 TGGCAACTAATTGTAAATACCTTACC 57.716 34.615 0.00 0.00 37.29 2.85
767 2074 9.030452 TCAATGGCAACTAATTGTAAATACCTT 57.970 29.630 0.00 0.00 38.17 3.50
768 2075 8.588290 TCAATGGCAACTAATTGTAAATACCT 57.412 30.769 0.00 0.00 38.17 3.08
769 2076 9.646427 TTTCAATGGCAACTAATTGTAAATACC 57.354 29.630 0.00 0.00 38.17 2.73
778 2085 9.097257 CGGATAAAATTTCAATGGCAACTAATT 57.903 29.630 0.00 0.00 37.61 1.40
779 2086 8.474025 TCGGATAAAATTTCAATGGCAACTAAT 58.526 29.630 0.00 0.00 37.61 1.73
780 2087 7.757624 GTCGGATAAAATTTCAATGGCAACTAA 59.242 33.333 0.00 0.00 37.61 2.24
781 2088 7.254852 GTCGGATAAAATTTCAATGGCAACTA 58.745 34.615 0.00 0.00 37.61 2.24
782 2089 6.099341 GTCGGATAAAATTTCAATGGCAACT 58.901 36.000 0.00 0.00 37.61 3.16
783 2090 5.004345 CGTCGGATAAAATTTCAATGGCAAC 59.996 40.000 0.00 0.00 0.00 4.17
784 2091 5.098893 CGTCGGATAAAATTTCAATGGCAA 58.901 37.500 0.00 0.00 0.00 4.52
785 2092 4.439426 CCGTCGGATAAAATTTCAATGGCA 60.439 41.667 4.91 0.00 0.00 4.92
786 2093 4.041723 CCGTCGGATAAAATTTCAATGGC 58.958 43.478 4.91 0.00 0.00 4.40
787 2094 4.041723 GCCGTCGGATAAAATTTCAATGG 58.958 43.478 17.49 0.00 0.00 3.16
788 2095 4.041723 GGCCGTCGGATAAAATTTCAATG 58.958 43.478 17.49 0.00 0.00 2.82
789 2096 3.067601 GGGCCGTCGGATAAAATTTCAAT 59.932 43.478 17.49 0.00 0.00 2.57
790 2097 2.424246 GGGCCGTCGGATAAAATTTCAA 59.576 45.455 17.49 0.00 0.00 2.69
791 2098 2.018515 GGGCCGTCGGATAAAATTTCA 58.981 47.619 17.49 0.00 0.00 2.69
792 2099 2.018515 TGGGCCGTCGGATAAAATTTC 58.981 47.619 17.49 0.00 0.00 2.17
793 2100 2.021457 CTGGGCCGTCGGATAAAATTT 58.979 47.619 17.49 0.00 0.00 1.82
794 2101 1.675552 CTGGGCCGTCGGATAAAATT 58.324 50.000 17.49 0.00 0.00 1.82
795 2102 0.179029 CCTGGGCCGTCGGATAAAAT 60.179 55.000 17.49 0.00 0.00 1.82
796 2103 1.222387 CCTGGGCCGTCGGATAAAA 59.778 57.895 17.49 0.00 0.00 1.52
797 2104 1.686455 TCCTGGGCCGTCGGATAAA 60.686 57.895 17.49 0.00 0.00 1.40
798 2105 2.042741 TCCTGGGCCGTCGGATAA 60.043 61.111 17.49 0.00 0.00 1.75
799 2106 2.836360 GTCCTGGGCCGTCGGATA 60.836 66.667 17.49 0.00 0.00 2.59
803 2110 4.570663 GATCGTCCTGGGCCGTCG 62.571 72.222 0.00 0.82 0.00 5.12
804 2111 4.570663 CGATCGTCCTGGGCCGTC 62.571 72.222 7.03 0.00 0.00 4.79
810 2117 1.683943 TAGTTACCCGATCGTCCTGG 58.316 55.000 15.09 10.43 0.00 4.45
811 2118 2.882761 TGATAGTTACCCGATCGTCCTG 59.117 50.000 15.09 2.07 0.00 3.86
812 2119 3.147629 CTGATAGTTACCCGATCGTCCT 58.852 50.000 15.09 4.61 0.00 3.85
813 2120 3.058363 GTCTGATAGTTACCCGATCGTCC 60.058 52.174 15.09 0.00 0.00 4.79
814 2121 3.363772 CGTCTGATAGTTACCCGATCGTC 60.364 52.174 15.09 2.71 0.00 4.20
815 2122 2.547211 CGTCTGATAGTTACCCGATCGT 59.453 50.000 15.09 0.00 0.00 3.73
816 2123 2.804527 TCGTCTGATAGTTACCCGATCG 59.195 50.000 8.51 8.51 0.00 3.69
817 2124 3.058363 GGTCGTCTGATAGTTACCCGATC 60.058 52.174 0.00 0.00 0.00 3.69
818 2125 2.883386 GGTCGTCTGATAGTTACCCGAT 59.117 50.000 0.00 0.00 0.00 4.18
819 2126 2.292267 GGTCGTCTGATAGTTACCCGA 58.708 52.381 0.00 0.00 0.00 5.14
820 2127 1.336125 GGGTCGTCTGATAGTTACCCG 59.664 57.143 0.00 0.00 37.41 5.28
821 2128 2.100418 GTGGGTCGTCTGATAGTTACCC 59.900 54.545 0.00 0.00 45.64 3.69
822 2129 2.756760 TGTGGGTCGTCTGATAGTTACC 59.243 50.000 0.00 0.00 0.00 2.85
823 2130 3.734293 GCTGTGGGTCGTCTGATAGTTAC 60.734 52.174 0.00 0.00 0.00 2.50
824 2131 2.426024 GCTGTGGGTCGTCTGATAGTTA 59.574 50.000 0.00 0.00 0.00 2.24
825 2132 1.204941 GCTGTGGGTCGTCTGATAGTT 59.795 52.381 0.00 0.00 0.00 2.24
826 2133 0.818296 GCTGTGGGTCGTCTGATAGT 59.182 55.000 0.00 0.00 0.00 2.12
827 2134 0.248661 CGCTGTGGGTCGTCTGATAG 60.249 60.000 0.00 0.00 0.00 2.08
828 2135 0.678684 TCGCTGTGGGTCGTCTGATA 60.679 55.000 0.00 0.00 0.00 2.15
829 2136 1.323271 ATCGCTGTGGGTCGTCTGAT 61.323 55.000 0.00 0.00 0.00 2.90
830 2137 1.532604 AATCGCTGTGGGTCGTCTGA 61.533 55.000 0.00 0.00 0.00 3.27
831 2138 0.670546 AAATCGCTGTGGGTCGTCTG 60.671 55.000 0.00 0.00 0.00 3.51
832 2139 0.670546 CAAATCGCTGTGGGTCGTCT 60.671 55.000 0.00 0.00 0.00 4.18
833 2140 1.635663 CCAAATCGCTGTGGGTCGTC 61.636 60.000 0.00 0.00 0.00 4.20
834 2141 1.671054 CCAAATCGCTGTGGGTCGT 60.671 57.895 0.00 0.00 0.00 4.34
835 2142 0.744414 ATCCAAATCGCTGTGGGTCG 60.744 55.000 0.00 0.00 35.46 4.79
836 2143 1.017387 GATCCAAATCGCTGTGGGTC 58.983 55.000 0.00 0.00 37.85 4.46
837 2144 3.175133 GATCCAAATCGCTGTGGGT 57.825 52.632 0.00 0.00 35.46 4.51
854 2161 2.598098 TACAGGCCGTCGGATCTCGA 62.598 60.000 17.49 2.65 46.77 4.04
855 2162 1.516365 ATACAGGCCGTCGGATCTCG 61.516 60.000 17.49 8.74 40.90 4.04
856 2163 0.241481 GATACAGGCCGTCGGATCTC 59.759 60.000 17.49 0.64 0.00 2.75
857 2164 1.516365 CGATACAGGCCGTCGGATCT 61.516 60.000 17.49 8.68 0.00 2.75
858 2165 1.081376 CGATACAGGCCGTCGGATC 60.081 63.158 17.49 7.65 0.00 3.36
859 2166 3.039988 CGATACAGGCCGTCGGAT 58.960 61.111 17.49 0.00 0.00 4.18
860 2167 3.896133 GCGATACAGGCCGTCGGA 61.896 66.667 17.49 0.00 36.00 4.55
861 2168 3.709880 TTGCGATACAGGCCGTCGG 62.710 63.158 19.29 6.99 36.00 4.79
862 2169 2.202690 TTGCGATACAGGCCGTCG 60.203 61.111 15.39 15.39 38.34 5.12
863 2170 1.883084 CCTTGCGATACAGGCCGTC 60.883 63.158 0.00 0.00 0.00 4.79
864 2171 2.186903 CCTTGCGATACAGGCCGT 59.813 61.111 0.00 0.49 0.00 5.68
865 2172 1.592669 CTCCTTGCGATACAGGCCG 60.593 63.158 0.00 0.00 0.00 6.13
866 2173 0.394565 ATCTCCTTGCGATACAGGCC 59.605 55.000 0.00 0.00 0.00 5.19
867 2174 2.246719 AATCTCCTTGCGATACAGGC 57.753 50.000 0.00 0.00 0.00 4.85
868 2175 2.797156 CGAAATCTCCTTGCGATACAGG 59.203 50.000 0.00 0.00 0.00 4.00
869 2176 3.706698 TCGAAATCTCCTTGCGATACAG 58.293 45.455 0.00 0.00 0.00 2.74
870 2177 3.793797 TCGAAATCTCCTTGCGATACA 57.206 42.857 0.00 0.00 0.00 2.29
871 2178 3.675698 GGATCGAAATCTCCTTGCGATAC 59.324 47.826 1.02 0.00 41.21 2.24
872 2179 3.611766 CGGATCGAAATCTCCTTGCGATA 60.612 47.826 1.02 0.00 41.21 2.92
873 2180 2.760374 GGATCGAAATCTCCTTGCGAT 58.240 47.619 0.60 0.60 43.48 4.58
874 2181 1.536072 CGGATCGAAATCTCCTTGCGA 60.536 52.381 1.53 0.00 35.32 5.10
875 2182 0.855349 CGGATCGAAATCTCCTTGCG 59.145 55.000 1.53 0.00 32.12 4.85
876 2183 1.861575 GTCGGATCGAAATCTCCTTGC 59.138 52.381 1.53 0.00 37.72 4.01
877 2184 2.120232 CGTCGGATCGAAATCTCCTTG 58.880 52.381 1.53 0.00 37.72 3.61
878 2185 1.067212 CCGTCGGATCGAAATCTCCTT 59.933 52.381 4.91 0.00 37.72 3.36
879 2186 0.669077 CCGTCGGATCGAAATCTCCT 59.331 55.000 4.91 0.00 37.72 3.69
880 2187 0.384669 ACCGTCGGATCGAAATCTCC 59.615 55.000 20.51 0.00 37.72 3.71
881 2188 1.599916 GGACCGTCGGATCGAAATCTC 60.600 57.143 20.51 0.79 37.72 2.75
882 2189 0.384669 GGACCGTCGGATCGAAATCT 59.615 55.000 20.51 0.00 37.72 2.40
883 2190 0.101759 TGGACCGTCGGATCGAAATC 59.898 55.000 20.51 2.42 37.72 2.17
884 2191 0.102481 CTGGACCGTCGGATCGAAAT 59.898 55.000 20.51 0.00 37.72 2.17
885 2192 0.961857 TCTGGACCGTCGGATCGAAA 60.962 55.000 20.51 0.00 37.72 3.46
886 2193 0.961857 TTCTGGACCGTCGGATCGAA 60.962 55.000 20.51 11.50 37.72 3.71
887 2194 0.750546 ATTCTGGACCGTCGGATCGA 60.751 55.000 20.51 8.21 0.00 3.59
888 2195 0.317938 GATTCTGGACCGTCGGATCG 60.318 60.000 20.51 3.30 0.00 3.69
889 2196 0.032267 GGATTCTGGACCGTCGGATC 59.968 60.000 20.51 11.57 0.00 3.36
890 2197 0.686441 TGGATTCTGGACCGTCGGAT 60.686 55.000 20.51 1.57 0.00 4.18
891 2198 0.901114 TTGGATTCTGGACCGTCGGA 60.901 55.000 20.51 0.00 0.00 4.55
892 2199 0.036765 TTTGGATTCTGGACCGTCGG 60.037 55.000 10.48 10.48 0.00 4.79
893 2200 1.076332 GTTTGGATTCTGGACCGTCG 58.924 55.000 0.00 0.00 0.00 5.12
894 2201 1.076332 CGTTTGGATTCTGGACCGTC 58.924 55.000 0.00 0.00 0.00 4.79
895 2202 0.953960 GCGTTTGGATTCTGGACCGT 60.954 55.000 0.00 0.00 0.00 4.83
896 2203 0.953471 TGCGTTTGGATTCTGGACCG 60.953 55.000 0.00 0.00 0.00 4.79
897 2204 0.521735 GTGCGTTTGGATTCTGGACC 59.478 55.000 0.00 0.00 0.00 4.46
898 2205 0.165944 CGTGCGTTTGGATTCTGGAC 59.834 55.000 0.00 0.00 0.00 4.02
899 2206 0.953471 CCGTGCGTTTGGATTCTGGA 60.953 55.000 0.00 0.00 0.00 3.86
900 2207 1.501741 CCGTGCGTTTGGATTCTGG 59.498 57.895 0.00 0.00 0.00 3.86
901 2208 0.953471 TCCCGTGCGTTTGGATTCTG 60.953 55.000 0.00 0.00 0.00 3.02
902 2209 0.673644 CTCCCGTGCGTTTGGATTCT 60.674 55.000 0.00 0.00 0.00 2.40
903 2210 0.672401 TCTCCCGTGCGTTTGGATTC 60.672 55.000 0.00 0.00 0.00 2.52
904 2211 0.673644 CTCTCCCGTGCGTTTGGATT 60.674 55.000 0.00 0.00 0.00 3.01
905 2212 1.079127 CTCTCCCGTGCGTTTGGAT 60.079 57.895 0.00 0.00 0.00 3.41
906 2213 2.342279 CTCTCCCGTGCGTTTGGA 59.658 61.111 0.00 0.00 0.00 3.53
907 2214 3.423154 GCTCTCCCGTGCGTTTGG 61.423 66.667 0.00 0.00 0.00 3.28
908 2215 2.357517 AGCTCTCCCGTGCGTTTG 60.358 61.111 0.00 0.00 34.94 2.93
909 2216 2.048127 GAGCTCTCCCGTGCGTTT 60.048 61.111 6.43 0.00 34.94 3.60
910 2217 4.070552 GGAGCTCTCCCGTGCGTT 62.071 66.667 14.64 0.00 43.94 4.84
919 2226 1.932511 CTGAAGCGAAATGGAGCTCTC 59.067 52.381 14.64 4.40 43.78 3.20
920 2227 1.552337 TCTGAAGCGAAATGGAGCTCT 59.448 47.619 14.64 0.00 43.78 4.09
921 2228 1.663135 GTCTGAAGCGAAATGGAGCTC 59.337 52.381 4.71 4.71 43.78 4.09
922 2229 1.277557 AGTCTGAAGCGAAATGGAGCT 59.722 47.619 0.00 0.00 46.97 4.09
923 2230 1.663135 GAGTCTGAAGCGAAATGGAGC 59.337 52.381 0.00 0.00 0.00 4.70
924 2231 3.244033 AGAGTCTGAAGCGAAATGGAG 57.756 47.619 0.00 0.00 0.00 3.86
925 2232 4.021456 TGTTAGAGTCTGAAGCGAAATGGA 60.021 41.667 1.86 0.00 0.00 3.41
926 2233 4.245660 TGTTAGAGTCTGAAGCGAAATGG 58.754 43.478 1.86 0.00 0.00 3.16
927 2234 5.163913 CCTTGTTAGAGTCTGAAGCGAAATG 60.164 44.000 1.86 0.00 0.00 2.32
928 2235 4.932200 CCTTGTTAGAGTCTGAAGCGAAAT 59.068 41.667 1.86 0.00 0.00 2.17
929 2236 4.307432 CCTTGTTAGAGTCTGAAGCGAAA 58.693 43.478 1.86 0.00 0.00 3.46
930 2237 3.306088 CCCTTGTTAGAGTCTGAAGCGAA 60.306 47.826 1.86 0.00 0.00 4.70
931 2238 2.231478 CCCTTGTTAGAGTCTGAAGCGA 59.769 50.000 1.86 0.00 0.00 4.93
932 2239 2.611518 CCCTTGTTAGAGTCTGAAGCG 58.388 52.381 1.86 0.00 0.00 4.68
933 2240 2.567615 TCCCCTTGTTAGAGTCTGAAGC 59.432 50.000 1.86 0.00 0.00 3.86
934 2241 5.659079 AGTATCCCCTTGTTAGAGTCTGAAG 59.341 44.000 1.86 2.44 0.00 3.02
935 2242 5.590818 AGTATCCCCTTGTTAGAGTCTGAA 58.409 41.667 1.86 0.00 0.00 3.02
936 2243 5.202004 GAGTATCCCCTTGTTAGAGTCTGA 58.798 45.833 1.86 0.00 0.00 3.27
937 2244 4.036971 CGAGTATCCCCTTGTTAGAGTCTG 59.963 50.000 1.86 0.00 0.00 3.51
938 2245 4.079901 TCGAGTATCCCCTTGTTAGAGTCT 60.080 45.833 0.00 0.00 0.00 3.24
939 2246 4.205587 TCGAGTATCCCCTTGTTAGAGTC 58.794 47.826 0.00 0.00 0.00 3.36
940 2247 4.246712 TCGAGTATCCCCTTGTTAGAGT 57.753 45.455 0.00 0.00 0.00 3.24
941 2248 5.533482 CAATCGAGTATCCCCTTGTTAGAG 58.467 45.833 0.00 0.00 0.00 2.43
942 2249 4.202223 GCAATCGAGTATCCCCTTGTTAGA 60.202 45.833 0.00 0.00 0.00 2.10
943 2250 4.058817 GCAATCGAGTATCCCCTTGTTAG 58.941 47.826 0.00 0.00 0.00 2.34
944 2251 3.452990 TGCAATCGAGTATCCCCTTGTTA 59.547 43.478 0.00 0.00 0.00 2.41
945 2252 2.238646 TGCAATCGAGTATCCCCTTGTT 59.761 45.455 0.00 0.00 0.00 2.83
946 2253 1.837439 TGCAATCGAGTATCCCCTTGT 59.163 47.619 0.00 0.00 0.00 3.16
947 2254 2.620251 TGCAATCGAGTATCCCCTTG 57.380 50.000 0.00 0.00 0.00 3.61
948 2255 3.744660 GAATGCAATCGAGTATCCCCTT 58.255 45.455 0.00 0.00 0.00 3.95
949 2256 2.289072 CGAATGCAATCGAGTATCCCCT 60.289 50.000 19.33 0.00 45.48 4.79
950 2257 2.069273 CGAATGCAATCGAGTATCCCC 58.931 52.381 19.33 0.00 45.48 4.81
951 2258 1.461127 GCGAATGCAATCGAGTATCCC 59.539 52.381 27.52 4.19 45.48 3.85
952 2259 2.863658 GCGAATGCAATCGAGTATCC 57.136 50.000 27.52 4.93 45.48 2.59
964 2271 0.845768 GTTGTGTGTGTTGCGAATGC 59.154 50.000 0.00 0.00 43.20 3.56
965 2272 2.375110 GAGTTGTGTGTGTTGCGAATG 58.625 47.619 0.00 0.00 0.00 2.67
966 2273 1.003972 CGAGTTGTGTGTGTTGCGAAT 60.004 47.619 0.00 0.00 0.00 3.34
967 2274 0.371989 CGAGTTGTGTGTGTTGCGAA 59.628 50.000 0.00 0.00 0.00 4.70
968 2275 2.002899 CGAGTTGTGTGTGTTGCGA 58.997 52.632 0.00 0.00 0.00 5.10
969 2276 1.651132 GCGAGTTGTGTGTGTTGCG 60.651 57.895 0.00 0.00 0.00 4.85
970 2277 0.861450 GTGCGAGTTGTGTGTGTTGC 60.861 55.000 0.00 0.00 0.00 4.17
980 2287 0.094216 CTTCGATGCTGTGCGAGTTG 59.906 55.000 0.00 0.00 37.85 3.16
1101 2408 1.340308 TGCTGGTGGATCTGGTTGATG 60.340 52.381 0.00 0.00 35.14 3.07
1125 2432 0.669318 CGTAGAAGTGGAAGGCGCAA 60.669 55.000 10.83 0.00 0.00 4.85
1209 2516 3.822607 GTCGAAGATGAGGCACTGT 57.177 52.632 0.00 0.00 37.83 3.55
1282 2589 1.118965 TCGGGCAGAGTGAGGAACAA 61.119 55.000 0.00 0.00 0.00 2.83
1293 2600 2.035155 TTCTCCTCGTCGGGCAGA 59.965 61.111 0.00 0.00 0.00 4.26
1480 2787 1.001293 GGTGAGCGCCATCATGATCTA 59.999 52.381 4.86 0.00 0.00 1.98
1546 2853 2.819595 CCATGGTGAACTCGGCGG 60.820 66.667 7.21 0.00 0.00 6.13
1560 2867 5.436175 CAAGAAACCCCAAAAGAAAACCAT 58.564 37.500 0.00 0.00 0.00 3.55
1563 2870 4.839121 ACCAAGAAACCCCAAAAGAAAAC 58.161 39.130 0.00 0.00 0.00 2.43
1564 2871 5.492895 GAACCAAGAAACCCCAAAAGAAAA 58.507 37.500 0.00 0.00 0.00 2.29
1569 2876 2.458620 ACGAACCAAGAAACCCCAAAA 58.541 42.857 0.00 0.00 0.00 2.44
1573 2880 1.335810 GTGAACGAACCAAGAAACCCC 59.664 52.381 0.00 0.00 0.00 4.95
1574 2881 1.335810 GGTGAACGAACCAAGAAACCC 59.664 52.381 0.00 0.00 40.22 4.11
1598 2905 2.170166 CACCTGCACCCACATAACAAT 58.830 47.619 0.00 0.00 0.00 2.71
1600 2907 0.476338 ACACCTGCACCCACATAACA 59.524 50.000 0.00 0.00 0.00 2.41
1764 3097 2.640316 AAATCCTGGCTCCGGTATTC 57.360 50.000 0.00 0.00 0.00 1.75
1840 3177 8.783903 ACATTTTATTAACTACCCTATCACCCA 58.216 33.333 0.00 0.00 0.00 4.51
1924 3271 5.009610 ACCGCCACTGCCTATATTATTTTTG 59.990 40.000 0.00 0.00 0.00 2.44
1930 3277 2.043992 ACACCGCCACTGCCTATATTA 58.956 47.619 0.00 0.00 0.00 0.98
1932 3279 0.106708 CACACCGCCACTGCCTATAT 59.893 55.000 0.00 0.00 0.00 0.86
1948 3296 2.100197 CTACATCCTCGGTTCCTCACA 58.900 52.381 0.00 0.00 0.00 3.58
1950 3298 2.025226 ACTCTACATCCTCGGTTCCTCA 60.025 50.000 0.00 0.00 0.00 3.86
2129 3482 8.801882 AATTAGGTCATCTATTTTGGAACGAA 57.198 30.769 0.00 0.00 0.00 3.85
2130 3483 8.801882 AAATTAGGTCATCTATTTTGGAACGA 57.198 30.769 0.00 0.00 33.07 3.85
2131 3484 9.289303 CAAAATTAGGTCATCTATTTTGGAACG 57.711 33.333 0.00 0.00 35.60 3.95
2208 3663 9.575783 GTTTTCAGTAGTATTTGTTGTTTCCAA 57.424 29.630 0.00 0.00 0.00 3.53
2211 3666 9.493206 TTCGTTTTCAGTAGTATTTGTTGTTTC 57.507 29.630 0.00 0.00 0.00 2.78
2239 3742 3.641437 TGTTGTGCAGAAGGTTTATGC 57.359 42.857 0.00 1.73 40.40 3.14
2306 3821 6.153067 TGCATAAGGTTATTTGTTGTTTCCG 58.847 36.000 0.00 0.00 0.00 4.30
2349 4114 9.956720 ACTTTGTGAAGAAGATTTCTGTATTTG 57.043 29.630 0.00 0.00 40.59 2.32
2399 4164 9.393249 CTTTGTTTTTCTTCGATAGTAATTGCA 57.607 29.630 0.00 0.00 37.40 4.08
2400 4165 9.394477 ACTTTGTTTTTCTTCGATAGTAATTGC 57.606 29.630 0.00 0.00 37.40 3.56
2432 4439 5.589050 GCTTTGTTTTCTTCCCCGATAGTAT 59.411 40.000 0.00 0.00 0.00 2.12
2442 4449 5.974751 TGTCGTATTTGCTTTGTTTTCTTCC 59.025 36.000 0.00 0.00 0.00 3.46
2443 4450 7.431084 TCTTGTCGTATTTGCTTTGTTTTCTTC 59.569 33.333 0.00 0.00 0.00 2.87
2468 4475 6.894339 TGTATTGGTTTCCTCCTCTTTTTC 57.106 37.500 0.00 0.00 0.00 2.29
2475 4482 8.506083 AGATGAATATTGTATTGGTTTCCTCCT 58.494 33.333 0.00 0.00 0.00 3.69
2476 4483 8.697507 AGATGAATATTGTATTGGTTTCCTCC 57.302 34.615 0.00 0.00 0.00 4.30
2480 4487 9.034544 GCCAAAGATGAATATTGTATTGGTTTC 57.965 33.333 0.00 0.00 38.60 2.78
2499 4506 3.951775 AGTGTTTTGTGTTGCCAAAGA 57.048 38.095 0.00 0.00 35.85 2.52
2504 4511 2.929398 CCTTCAAGTGTTTTGTGTTGCC 59.071 45.455 0.00 0.00 0.00 4.52
2512 4519 6.405538 TCTCAAAAATGCCTTCAAGTGTTTT 58.594 32.000 0.00 0.00 0.00 2.43
2585 4592 5.351948 TGAGCTAACACTGTTATGCCATA 57.648 39.130 14.61 0.00 0.00 2.74
2604 4611 4.330074 CCTGAGCACTATTTACGGTTTGAG 59.670 45.833 0.00 0.00 0.00 3.02
2610 4617 3.187700 GTCACCTGAGCACTATTTACGG 58.812 50.000 0.00 0.00 0.00 4.02
2625 4632 6.058183 AGTATTACCGTTAGTATCGTCACCT 58.942 40.000 0.31 0.00 0.00 4.00
2626 4633 6.305693 AGTATTACCGTTAGTATCGTCACC 57.694 41.667 0.31 0.00 0.00 4.02
2638 4645 6.151648 TGTGTGAGCTAACTAGTATTACCGTT 59.848 38.462 2.06 4.98 0.00 4.44
2705 4712 7.954788 AATAATTTCTCTCTTATCCGCACTC 57.045 36.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.