Multiple sequence alignment - TraesCS5A01G238800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G238800 chr5A 100.000 2768 0 0 1 2768 454818118 454815351 0.000000e+00 5112.0
1 TraesCS5A01G238800 chr5A 85.059 1178 100 34 656 1806 457003407 457004535 0.000000e+00 1131.0
2 TraesCS5A01G238800 chr5D 89.829 1927 122 40 605 2501 354031873 354029991 0.000000e+00 2405.0
3 TraesCS5A01G238800 chr5D 86.833 1162 93 29 650 1806 354890812 354891918 0.000000e+00 1243.0
4 TraesCS5A01G238800 chr5D 78.317 618 69 37 1107 1707 354836973 354837542 3.410000e-89 339.0
5 TraesCS5A01G238800 chr5D 88.350 206 13 3 2563 2768 354029993 354029799 1.280000e-58 237.0
6 TraesCS5A01G238800 chr5D 89.730 185 17 2 170 352 322978469 322978653 4.610000e-58 235.0
7 TraesCS5A01G238800 chr5D 77.184 206 25 15 667 857 354836599 354836797 1.750000e-17 100.0
8 TraesCS5A01G238800 chr5B 91.015 1625 96 25 356 1961 418375268 418373675 0.000000e+00 2146.0
9 TraesCS5A01G238800 chr5B 85.411 1179 112 38 650 1806 419643986 419645126 0.000000e+00 1170.0
10 TraesCS5A01G238800 chr5B 82.622 633 51 29 2143 2768 418372133 418371553 3.180000e-139 505.0
11 TraesCS5A01G238800 chr5B 90.164 183 16 2 172 352 433527350 433527168 1.280000e-58 237.0
12 TraesCS5A01G238800 chr5B 84.848 66 7 2 2413 2475 419645358 419645423 2.300000e-06 63.9
13 TraesCS5A01G238800 chrUn 89.362 188 19 1 166 352 277314042 277314229 4.610000e-58 235.0
14 TraesCS5A01G238800 chr2B 89.362 188 19 1 166 352 314779072 314778885 4.610000e-58 235.0
15 TraesCS5A01G238800 chr2B 89.362 188 16 4 173 357 611637913 611637727 1.660000e-57 233.0
16 TraesCS5A01G238800 chr2A 89.362 188 18 2 171 356 60738867 60739054 4.610000e-58 235.0
17 TraesCS5A01G238800 chr2A 88.889 189 17 4 167 352 692697653 692697840 2.140000e-56 230.0
18 TraesCS5A01G238800 chr1B 88.660 194 18 4 170 359 70318574 70318381 1.660000e-57 233.0
19 TraesCS5A01G238800 chr1B 95.122 41 2 0 2147 2187 239780275 239780235 6.400000e-07 65.8
20 TraesCS5A01G238800 chr4B 88.265 196 18 5 159 352 455621438 455621630 2.140000e-56 230.0
21 TraesCS5A01G238800 chr3A 77.953 127 17 5 2147 2270 651517269 651517387 4.950000e-08 69.4
22 TraesCS5A01G238800 chr2D 94.737 38 2 0 2147 2184 461083361 461083398 2.980000e-05 60.2
23 TraesCS5A01G238800 chr2D 96.875 32 1 0 2147 2178 68867490 68867521 1.000000e-03 54.7
24 TraesCS5A01G238800 chr1A 81.707 82 4 7 2147 2228 217608363 217608433 1.070000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G238800 chr5A 454815351 454818118 2767 True 5112.00 5112 100.0000 1 2768 1 chr5A.!!$R1 2767
1 TraesCS5A01G238800 chr5A 457003407 457004535 1128 False 1131.00 1131 85.0590 656 1806 1 chr5A.!!$F1 1150
2 TraesCS5A01G238800 chr5D 354029799 354031873 2074 True 1321.00 2405 89.0895 605 2768 2 chr5D.!!$R1 2163
3 TraesCS5A01G238800 chr5D 354890812 354891918 1106 False 1243.00 1243 86.8330 650 1806 1 chr5D.!!$F2 1156
4 TraesCS5A01G238800 chr5D 354836599 354837542 943 False 219.50 339 77.7505 667 1707 2 chr5D.!!$F3 1040
5 TraesCS5A01G238800 chr5B 418371553 418375268 3715 True 1325.50 2146 86.8185 356 2768 2 chr5B.!!$R2 2412
6 TraesCS5A01G238800 chr5B 419643986 419645423 1437 False 616.95 1170 85.1295 650 2475 2 chr5B.!!$F1 1825

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
207 208 0.029834 GCATGTAGCTCCCATTTGCG 59.97 55.0 0.0 0.0 41.15 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1982 2095 0.433492 CTACAACGACGCCAAAGACG 59.567 55.0 0.0 0.0 35.6 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.231215 ACTTCTCTGCGTATCATGGC 57.769 50.000 0.00 0.00 0.00 4.40
20 21 1.482182 ACTTCTCTGCGTATCATGGCA 59.518 47.619 0.00 0.00 37.63 4.92
21 22 2.093500 ACTTCTCTGCGTATCATGGCAA 60.093 45.455 0.00 0.00 38.94 4.52
22 23 2.916702 TCTCTGCGTATCATGGCAAT 57.083 45.000 0.00 0.00 38.94 3.56
23 24 3.198409 TCTCTGCGTATCATGGCAATT 57.802 42.857 0.00 0.00 38.94 2.32
24 25 3.133691 TCTCTGCGTATCATGGCAATTC 58.866 45.455 0.00 0.00 38.94 2.17
25 26 1.866601 TCTGCGTATCATGGCAATTCG 59.133 47.619 0.00 0.00 38.94 3.34
26 27 0.307453 TGCGTATCATGGCAATTCGC 59.693 50.000 13.93 13.93 41.47 4.70
35 36 2.572812 GCAATTCGCCATGGTGCA 59.427 55.556 20.97 10.73 35.28 4.57
36 37 1.079956 GCAATTCGCCATGGTGCAA 60.080 52.632 20.97 15.19 35.28 4.08
37 38 1.353609 GCAATTCGCCATGGTGCAAC 61.354 55.000 20.97 0.00 35.28 4.17
38 39 0.038435 CAATTCGCCATGGTGCAACA 60.038 50.000 20.97 7.04 39.98 3.33
39 40 0.896923 AATTCGCCATGGTGCAACAT 59.103 45.000 20.97 12.64 39.98 2.71
40 41 0.173935 ATTCGCCATGGTGCAACATG 59.826 50.000 33.44 33.44 46.02 3.21
45 46 3.844911 CATGGTGCAACATGGCAAT 57.155 47.368 32.91 1.51 46.93 3.56
46 47 2.102070 CATGGTGCAACATGGCAATT 57.898 45.000 32.91 0.67 46.93 2.32
47 48 2.004017 CATGGTGCAACATGGCAATTC 58.996 47.619 32.91 0.00 46.93 2.17
48 49 0.321021 TGGTGCAACATGGCAATTCC 59.679 50.000 0.00 0.00 46.93 3.01
49 50 0.609662 GGTGCAACATGGCAATTCCT 59.390 50.000 0.00 0.00 46.93 3.36
50 51 1.673626 GGTGCAACATGGCAATTCCTG 60.674 52.381 0.00 0.00 46.93 3.86
51 52 0.609151 TGCAACATGGCAATTCCTGG 59.391 50.000 0.00 0.00 41.65 4.45
52 53 0.896923 GCAACATGGCAATTCCTGGA 59.103 50.000 0.00 0.00 35.26 3.86
53 54 1.483415 GCAACATGGCAATTCCTGGAT 59.517 47.619 0.00 0.00 35.26 3.41
54 55 2.694628 GCAACATGGCAATTCCTGGATA 59.305 45.455 0.00 0.00 35.26 2.59
55 56 3.322828 GCAACATGGCAATTCCTGGATAT 59.677 43.478 0.00 0.00 35.26 1.63
56 57 4.798263 GCAACATGGCAATTCCTGGATATG 60.798 45.833 0.00 0.77 35.26 1.78
57 58 4.188937 ACATGGCAATTCCTGGATATGT 57.811 40.909 0.00 0.00 35.26 2.29
58 59 3.893200 ACATGGCAATTCCTGGATATGTG 59.107 43.478 0.00 0.00 35.26 3.21
59 60 2.948115 TGGCAATTCCTGGATATGTGG 58.052 47.619 0.00 0.00 35.26 4.17
60 61 2.242043 GGCAATTCCTGGATATGTGGG 58.758 52.381 0.00 0.00 0.00 4.61
61 62 2.242043 GCAATTCCTGGATATGTGGGG 58.758 52.381 0.00 0.00 0.00 4.96
62 63 2.158475 GCAATTCCTGGATATGTGGGGA 60.158 50.000 0.00 0.00 0.00 4.81
63 64 3.691020 GCAATTCCTGGATATGTGGGGAA 60.691 47.826 0.00 0.00 39.84 3.97
64 65 3.884037 ATTCCTGGATATGTGGGGAAC 57.116 47.619 0.00 0.00 38.62 3.62
65 66 2.587060 TCCTGGATATGTGGGGAACT 57.413 50.000 0.00 0.00 0.00 3.01
66 67 2.858644 TCCTGGATATGTGGGGAACTT 58.141 47.619 0.00 0.00 0.00 2.66
67 68 2.777692 TCCTGGATATGTGGGGAACTTC 59.222 50.000 0.00 0.00 0.00 3.01
68 69 2.158608 CCTGGATATGTGGGGAACTTCC 60.159 54.545 0.00 0.00 35.23 3.46
81 82 3.611970 GGAACTTCCCTTTCTCTTAGCC 58.388 50.000 0.00 0.00 0.00 3.93
82 83 3.611970 GAACTTCCCTTTCTCTTAGCCC 58.388 50.000 0.00 0.00 0.00 5.19
83 84 2.632537 ACTTCCCTTTCTCTTAGCCCA 58.367 47.619 0.00 0.00 0.00 5.36
84 85 2.306219 ACTTCCCTTTCTCTTAGCCCAC 59.694 50.000 0.00 0.00 0.00 4.61
85 86 1.286248 TCCCTTTCTCTTAGCCCACC 58.714 55.000 0.00 0.00 0.00 4.61
86 87 0.991920 CCCTTTCTCTTAGCCCACCA 59.008 55.000 0.00 0.00 0.00 4.17
87 88 1.340114 CCCTTTCTCTTAGCCCACCAC 60.340 57.143 0.00 0.00 0.00 4.16
88 89 1.630878 CCTTTCTCTTAGCCCACCACT 59.369 52.381 0.00 0.00 0.00 4.00
89 90 2.040412 CCTTTCTCTTAGCCCACCACTT 59.960 50.000 0.00 0.00 0.00 3.16
90 91 3.339141 CTTTCTCTTAGCCCACCACTTC 58.661 50.000 0.00 0.00 0.00 3.01
91 92 2.327325 TCTCTTAGCCCACCACTTCT 57.673 50.000 0.00 0.00 0.00 2.85
92 93 2.621070 TCTCTTAGCCCACCACTTCTT 58.379 47.619 0.00 0.00 0.00 2.52
93 94 2.979678 TCTCTTAGCCCACCACTTCTTT 59.020 45.455 0.00 0.00 0.00 2.52
94 95 3.008049 TCTCTTAGCCCACCACTTCTTTC 59.992 47.826 0.00 0.00 0.00 2.62
95 96 2.979678 TCTTAGCCCACCACTTCTTTCT 59.020 45.455 0.00 0.00 0.00 2.52
96 97 4.164981 TCTTAGCCCACCACTTCTTTCTA 58.835 43.478 0.00 0.00 0.00 2.10
97 98 2.861147 AGCCCACCACTTCTTTCTAC 57.139 50.000 0.00 0.00 0.00 2.59
98 99 2.339769 AGCCCACCACTTCTTTCTACT 58.660 47.619 0.00 0.00 0.00 2.57
99 100 3.517612 AGCCCACCACTTCTTTCTACTA 58.482 45.455 0.00 0.00 0.00 1.82
100 101 3.261137 AGCCCACCACTTCTTTCTACTAC 59.739 47.826 0.00 0.00 0.00 2.73
101 102 3.007614 GCCCACCACTTCTTTCTACTACA 59.992 47.826 0.00 0.00 0.00 2.74
102 103 4.822026 CCCACCACTTCTTTCTACTACAG 58.178 47.826 0.00 0.00 0.00 2.74
103 104 4.527038 CCCACCACTTCTTTCTACTACAGA 59.473 45.833 0.00 0.00 0.00 3.41
104 105 5.011738 CCCACCACTTCTTTCTACTACAGAA 59.988 44.000 0.00 0.00 41.66 3.02
105 106 6.295916 CCCACCACTTCTTTCTACTACAGAAT 60.296 42.308 0.00 0.00 42.88 2.40
106 107 6.591834 CCACCACTTCTTTCTACTACAGAATG 59.408 42.308 0.00 0.00 42.88 2.67
107 108 6.591834 CACCACTTCTTTCTACTACAGAATGG 59.408 42.308 0.00 0.00 42.88 3.16
108 109 5.582665 CCACTTCTTTCTACTACAGAATGGC 59.417 44.000 0.00 0.00 42.88 4.40
109 110 6.166279 CACTTCTTTCTACTACAGAATGGCA 58.834 40.000 0.00 0.00 42.88 4.92
110 111 6.650807 CACTTCTTTCTACTACAGAATGGCAA 59.349 38.462 0.00 0.00 42.88 4.52
111 112 7.173218 CACTTCTTTCTACTACAGAATGGCAAA 59.827 37.037 0.00 0.00 42.88 3.68
112 113 7.885399 ACTTCTTTCTACTACAGAATGGCAAAT 59.115 33.333 0.00 0.00 42.88 2.32
113 114 8.635765 TTCTTTCTACTACAGAATGGCAAATT 57.364 30.769 0.00 0.00 42.88 1.82
114 115 8.268850 TCTTTCTACTACAGAATGGCAAATTC 57.731 34.615 0.00 3.73 42.88 2.17
115 116 7.336931 TCTTTCTACTACAGAATGGCAAATTCC 59.663 37.037 7.53 0.00 42.88 3.01
116 117 5.116180 TCTACTACAGAATGGCAAATTCCG 58.884 41.667 7.53 1.50 43.62 4.30
117 118 3.950397 ACTACAGAATGGCAAATTCCGA 58.050 40.909 7.53 0.00 43.62 4.55
118 119 4.331968 ACTACAGAATGGCAAATTCCGAA 58.668 39.130 7.53 0.00 43.62 4.30
119 120 4.764823 ACTACAGAATGGCAAATTCCGAAA 59.235 37.500 7.53 0.00 43.62 3.46
120 121 4.599047 ACAGAATGGCAAATTCCGAAAA 57.401 36.364 7.53 0.00 43.62 2.29
121 122 4.306600 ACAGAATGGCAAATTCCGAAAAC 58.693 39.130 7.53 0.00 43.62 2.43
122 123 4.202202 ACAGAATGGCAAATTCCGAAAACA 60.202 37.500 7.53 0.00 43.62 2.83
123 124 4.150451 CAGAATGGCAAATTCCGAAAACAC 59.850 41.667 7.53 0.00 0.00 3.32
124 125 3.742433 ATGGCAAATTCCGAAAACACA 57.258 38.095 0.00 0.00 0.00 3.72
125 126 3.742433 TGGCAAATTCCGAAAACACAT 57.258 38.095 0.00 0.00 0.00 3.21
126 127 3.388308 TGGCAAATTCCGAAAACACATG 58.612 40.909 0.00 0.00 0.00 3.21
127 128 3.068732 TGGCAAATTCCGAAAACACATGA 59.931 39.130 0.00 0.00 0.00 3.07
128 129 3.428534 GGCAAATTCCGAAAACACATGAC 59.571 43.478 0.00 0.00 0.00 3.06
129 130 4.047822 GCAAATTCCGAAAACACATGACA 58.952 39.130 0.00 0.00 0.00 3.58
130 131 4.505922 GCAAATTCCGAAAACACATGACAA 59.494 37.500 0.00 0.00 0.00 3.18
131 132 5.177327 GCAAATTCCGAAAACACATGACAAT 59.823 36.000 0.00 0.00 0.00 2.71
132 133 6.292811 GCAAATTCCGAAAACACATGACAATT 60.293 34.615 0.00 0.00 0.00 2.32
133 134 7.629130 CAAATTCCGAAAACACATGACAATTT 58.371 30.769 0.00 0.00 0.00 1.82
134 135 7.784633 AATTCCGAAAACACATGACAATTTT 57.215 28.000 0.00 0.23 0.00 1.82
135 136 6.820470 TTCCGAAAACACATGACAATTTTC 57.180 33.333 0.00 8.70 37.58 2.29
136 137 6.142818 TCCGAAAACACATGACAATTTTCT 57.857 33.333 0.00 0.00 38.39 2.52
137 138 6.568869 TCCGAAAACACATGACAATTTTCTT 58.431 32.000 0.00 0.00 38.39 2.52
138 139 6.695278 TCCGAAAACACATGACAATTTTCTTC 59.305 34.615 0.00 0.00 38.39 2.87
139 140 6.344936 CCGAAAACACATGACAATTTTCTTCG 60.345 38.462 0.00 1.65 38.39 3.79
140 141 6.196353 CGAAAACACATGACAATTTTCTTCGT 59.804 34.615 0.00 0.00 38.39 3.85
141 142 7.253618 CGAAAACACATGACAATTTTCTTCGTT 60.254 33.333 0.00 0.00 38.39 3.85
142 143 6.810888 AACACATGACAATTTTCTTCGTTG 57.189 33.333 0.00 0.00 0.00 4.10
143 144 5.890334 ACACATGACAATTTTCTTCGTTGT 58.110 33.333 0.00 0.00 38.66 3.32
144 145 6.329496 ACACATGACAATTTTCTTCGTTGTT 58.671 32.000 0.00 0.00 36.30 2.83
145 146 6.253298 ACACATGACAATTTTCTTCGTTGTTG 59.747 34.615 0.00 0.00 36.30 3.33
146 147 6.253298 CACATGACAATTTTCTTCGTTGTTGT 59.747 34.615 0.00 0.00 36.30 3.32
147 148 7.430793 CACATGACAATTTTCTTCGTTGTTGTA 59.569 33.333 0.00 0.00 36.30 2.41
148 149 8.134895 ACATGACAATTTTCTTCGTTGTTGTAT 58.865 29.630 0.00 0.00 36.30 2.29
149 150 7.906611 TGACAATTTTCTTCGTTGTTGTATG 57.093 32.000 0.00 0.00 36.30 2.39
150 151 7.698628 TGACAATTTTCTTCGTTGTTGTATGA 58.301 30.769 0.00 0.00 36.30 2.15
151 152 7.642194 TGACAATTTTCTTCGTTGTTGTATGAC 59.358 33.333 0.00 0.00 36.30 3.06
152 153 7.476667 ACAATTTTCTTCGTTGTTGTATGACA 58.523 30.769 0.00 0.00 32.53 3.58
153 154 7.971168 ACAATTTTCTTCGTTGTTGTATGACAA 59.029 29.630 0.00 0.00 37.20 3.18
154 155 8.967218 CAATTTTCTTCGTTGTTGTATGACAAT 58.033 29.630 0.00 0.00 40.59 2.71
155 156 9.528018 AATTTTCTTCGTTGTTGTATGACAATT 57.472 25.926 0.00 0.00 40.59 2.32
156 157 8.555166 TTTTCTTCGTTGTTGTATGACAATTC 57.445 30.769 0.00 0.00 40.59 2.17
157 158 7.490962 TTCTTCGTTGTTGTATGACAATTCT 57.509 32.000 0.00 0.00 40.59 2.40
158 159 7.490962 TCTTCGTTGTTGTATGACAATTCTT 57.509 32.000 0.00 0.00 40.59 2.52
159 160 7.925993 TCTTCGTTGTTGTATGACAATTCTTT 58.074 30.769 0.00 0.00 40.59 2.52
160 161 8.067784 TCTTCGTTGTTGTATGACAATTCTTTC 58.932 33.333 0.00 0.00 40.59 2.62
161 162 6.359545 TCGTTGTTGTATGACAATTCTTTCG 58.640 36.000 0.00 0.00 40.59 3.46
162 163 6.201234 TCGTTGTTGTATGACAATTCTTTCGA 59.799 34.615 0.00 0.00 40.59 3.71
163 164 6.299966 CGTTGTTGTATGACAATTCTTTCGAC 59.700 38.462 0.00 0.00 40.59 4.20
164 165 7.352739 GTTGTTGTATGACAATTCTTTCGACT 58.647 34.615 0.00 0.00 40.59 4.18
165 166 8.492748 GTTGTTGTATGACAATTCTTTCGACTA 58.507 33.333 0.00 0.00 40.59 2.59
166 167 8.771920 TGTTGTATGACAATTCTTTCGACTAT 57.228 30.769 0.00 0.00 40.59 2.12
167 168 9.863845 TGTTGTATGACAATTCTTTCGACTATA 57.136 29.630 0.00 0.00 40.59 1.31
179 180 8.658499 TTCTTTCGACTATAGAATAAAAGGGC 57.342 34.615 6.78 0.00 0.00 5.19
180 181 7.788026 TCTTTCGACTATAGAATAAAAGGGCA 58.212 34.615 6.78 0.00 0.00 5.36
181 182 7.926555 TCTTTCGACTATAGAATAAAAGGGCAG 59.073 37.037 6.78 0.00 0.00 4.85
182 183 6.971726 TCGACTATAGAATAAAAGGGCAGA 57.028 37.500 6.78 0.00 0.00 4.26
183 184 6.746120 TCGACTATAGAATAAAAGGGCAGAC 58.254 40.000 6.78 0.00 0.00 3.51
184 185 5.927115 CGACTATAGAATAAAAGGGCAGACC 59.073 44.000 6.78 0.00 40.67 3.85
185 186 5.855045 ACTATAGAATAAAAGGGCAGACCG 58.145 41.667 6.78 0.00 46.96 4.79
186 187 5.601313 ACTATAGAATAAAAGGGCAGACCGA 59.399 40.000 6.78 0.00 46.96 4.69
187 188 3.933861 AGAATAAAAGGGCAGACCGAT 57.066 42.857 0.00 0.00 46.96 4.18
188 189 3.545703 AGAATAAAAGGGCAGACCGATG 58.454 45.455 0.00 0.00 46.96 3.84
189 190 1.680338 ATAAAAGGGCAGACCGATGC 58.320 50.000 0.00 0.00 46.96 3.91
196 197 1.937391 GCAGACCGATGCATGTAGC 59.063 57.895 2.46 1.05 45.77 3.58
197 198 0.531532 GCAGACCGATGCATGTAGCT 60.532 55.000 2.46 0.00 45.77 3.32
198 199 1.495878 CAGACCGATGCATGTAGCTC 58.504 55.000 2.46 0.00 45.94 4.09
199 200 0.390860 AGACCGATGCATGTAGCTCC 59.609 55.000 2.46 0.00 45.94 4.70
200 201 0.601311 GACCGATGCATGTAGCTCCC 60.601 60.000 2.46 0.00 45.94 4.30
201 202 1.337384 ACCGATGCATGTAGCTCCCA 61.337 55.000 2.46 0.00 45.94 4.37
202 203 0.035881 CCGATGCATGTAGCTCCCAT 59.964 55.000 2.46 0.00 45.94 4.00
203 204 1.544093 CCGATGCATGTAGCTCCCATT 60.544 52.381 2.46 0.00 45.94 3.16
204 205 2.224606 CGATGCATGTAGCTCCCATTT 58.775 47.619 2.46 0.00 45.94 2.32
205 206 2.031420 CGATGCATGTAGCTCCCATTTG 60.031 50.000 2.46 0.00 45.94 2.32
206 207 1.105457 TGCATGTAGCTCCCATTTGC 58.895 50.000 0.00 0.00 45.94 3.68
207 208 0.029834 GCATGTAGCTCCCATTTGCG 59.970 55.000 0.00 0.00 41.15 4.85
208 209 0.029834 CATGTAGCTCCCATTTGCGC 59.970 55.000 0.00 0.00 0.00 6.09
209 210 0.394216 ATGTAGCTCCCATTTGCGCA 60.394 50.000 5.66 5.66 0.00 6.09
210 211 1.026182 TGTAGCTCCCATTTGCGCAG 61.026 55.000 11.31 0.00 0.00 5.18
211 212 1.451927 TAGCTCCCATTTGCGCAGG 60.452 57.895 11.31 8.90 0.00 4.85
212 213 2.891941 TAGCTCCCATTTGCGCAGGG 62.892 60.000 23.80 23.80 44.22 4.45
213 214 2.361610 CTCCCATTTGCGCAGGGT 60.362 61.111 27.15 9.01 43.31 4.34
214 215 2.361104 TCCCATTTGCGCAGGGTC 60.361 61.111 27.15 0.00 43.31 4.46
215 216 3.451894 CCCATTTGCGCAGGGTCC 61.452 66.667 22.00 0.00 37.81 4.46
216 217 3.814268 CCATTTGCGCAGGGTCCG 61.814 66.667 11.31 0.00 0.00 4.79
217 218 3.814268 CATTTGCGCAGGGTCCGG 61.814 66.667 11.31 0.00 0.00 5.14
218 219 4.028490 ATTTGCGCAGGGTCCGGA 62.028 61.111 11.31 0.00 0.00 5.14
219 220 3.976701 ATTTGCGCAGGGTCCGGAG 62.977 63.158 11.31 0.00 0.00 4.63
222 223 4.899239 GCGCAGGGTCCGGAGATG 62.899 72.222 3.06 5.10 0.00 2.90
223 224 4.227134 CGCAGGGTCCGGAGATGG 62.227 72.222 3.06 0.00 0.00 3.51
224 225 3.866582 GCAGGGTCCGGAGATGGG 61.867 72.222 3.06 0.00 0.00 4.00
225 226 2.365635 CAGGGTCCGGAGATGGGT 60.366 66.667 3.06 0.00 0.00 4.51
226 227 2.041819 AGGGTCCGGAGATGGGTC 60.042 66.667 3.06 0.00 0.00 4.46
227 228 2.041819 GGGTCCGGAGATGGGTCT 60.042 66.667 3.06 0.00 37.42 3.85
228 229 2.435693 GGGTCCGGAGATGGGTCTG 61.436 68.421 3.06 0.00 33.97 3.51
229 230 1.381327 GGTCCGGAGATGGGTCTGA 60.381 63.158 3.06 0.00 33.97 3.27
230 231 1.677637 GGTCCGGAGATGGGTCTGAC 61.678 65.000 3.06 0.00 33.97 3.51
231 232 1.381327 TCCGGAGATGGGTCTGACC 60.381 63.158 18.65 18.65 37.60 4.02
232 233 1.685765 CCGGAGATGGGTCTGACCA 60.686 63.158 26.94 14.17 46.24 4.02
233 234 1.517832 CGGAGATGGGTCTGACCAC 59.482 63.158 26.94 16.80 44.72 4.16
234 235 0.972983 CGGAGATGGGTCTGACCACT 60.973 60.000 26.94 20.94 44.72 4.00
235 236 1.280457 GGAGATGGGTCTGACCACTT 58.720 55.000 26.94 14.49 44.72 3.16
236 237 1.630878 GGAGATGGGTCTGACCACTTT 59.369 52.381 26.94 10.55 44.72 2.66
237 238 2.616510 GGAGATGGGTCTGACCACTTTG 60.617 54.545 26.94 0.00 44.72 2.77
238 239 1.352352 AGATGGGTCTGACCACTTTGG 59.648 52.381 26.94 0.00 44.72 3.28
239 240 0.405585 ATGGGTCTGACCACTTTGGG 59.594 55.000 26.94 0.00 44.72 4.12
240 241 0.991355 TGGGTCTGACCACTTTGGGT 60.991 55.000 26.94 0.00 43.37 4.51
251 252 5.514500 ACCACTTTGGGTCTATTGTATGT 57.486 39.130 0.00 0.00 43.37 2.29
252 253 6.630203 ACCACTTTGGGTCTATTGTATGTA 57.370 37.500 0.00 0.00 43.37 2.29
253 254 6.650120 ACCACTTTGGGTCTATTGTATGTAG 58.350 40.000 0.00 0.00 43.37 2.74
254 255 5.527582 CCACTTTGGGTCTATTGTATGTAGC 59.472 44.000 0.00 0.00 32.67 3.58
255 256 5.527582 CACTTTGGGTCTATTGTATGTAGCC 59.472 44.000 0.00 0.00 0.00 3.93
256 257 5.428783 ACTTTGGGTCTATTGTATGTAGCCT 59.571 40.000 0.00 0.00 0.00 4.58
257 258 5.968676 TTGGGTCTATTGTATGTAGCCTT 57.031 39.130 0.00 0.00 0.00 4.35
258 259 5.546621 TGGGTCTATTGTATGTAGCCTTC 57.453 43.478 0.00 0.00 0.00 3.46
259 260 5.216622 TGGGTCTATTGTATGTAGCCTTCT 58.783 41.667 0.00 0.00 0.00 2.85
260 261 5.304614 TGGGTCTATTGTATGTAGCCTTCTC 59.695 44.000 0.00 0.00 0.00 2.87
261 262 5.540719 GGGTCTATTGTATGTAGCCTTCTCT 59.459 44.000 0.00 0.00 0.00 3.10
262 263 6.720288 GGGTCTATTGTATGTAGCCTTCTCTA 59.280 42.308 0.00 0.00 0.00 2.43
263 264 7.397761 GGGTCTATTGTATGTAGCCTTCTCTAT 59.602 40.741 0.00 0.00 0.00 1.98
264 265 9.463902 GGTCTATTGTATGTAGCCTTCTCTATA 57.536 37.037 0.00 0.00 0.00 1.31
271 272 8.307483 TGTATGTAGCCTTCTCTATATTTCTGC 58.693 37.037 0.00 0.00 0.00 4.26
272 273 6.731292 TGTAGCCTTCTCTATATTTCTGCA 57.269 37.500 0.00 0.00 0.00 4.41
273 274 7.124573 TGTAGCCTTCTCTATATTTCTGCAA 57.875 36.000 0.00 0.00 0.00 4.08
274 275 7.212976 TGTAGCCTTCTCTATATTTCTGCAAG 58.787 38.462 0.00 0.00 0.00 4.01
275 276 6.491714 AGCCTTCTCTATATTTCTGCAAGA 57.508 37.500 0.00 0.00 44.68 3.02
285 286 3.329300 TCTGCAAGAGGCTGTTTCC 57.671 52.632 0.00 0.00 38.67 3.13
286 287 0.473755 TCTGCAAGAGGCTGTTTCCA 59.526 50.000 0.00 0.00 38.67 3.53
287 288 0.879765 CTGCAAGAGGCTGTTTCCAG 59.120 55.000 0.00 0.00 45.15 3.86
288 289 0.538057 TGCAAGAGGCTGTTTCCAGG 60.538 55.000 0.00 0.00 45.15 4.45
289 290 0.250901 GCAAGAGGCTGTTTCCAGGA 60.251 55.000 0.00 0.00 39.22 3.86
290 291 1.528129 CAAGAGGCTGTTTCCAGGAC 58.472 55.000 0.00 0.00 39.22 3.85
291 292 1.072965 CAAGAGGCTGTTTCCAGGACT 59.927 52.381 0.00 0.00 39.22 3.85
292 293 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
293 294 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
294 295 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
295 296 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
296 297 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
297 298 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
298 299 2.749800 GCTGTTTCCAGGACTTGAACCT 60.750 50.000 0.00 0.00 39.22 3.50
299 300 3.142174 CTGTTTCCAGGACTTGAACCTC 58.858 50.000 0.00 0.00 35.35 3.85
300 301 2.777692 TGTTTCCAGGACTTGAACCTCT 59.222 45.455 0.00 0.00 35.35 3.69
301 302 3.142174 GTTTCCAGGACTTGAACCTCTG 58.858 50.000 0.00 0.00 35.35 3.35
302 303 2.398754 TCCAGGACTTGAACCTCTGA 57.601 50.000 0.00 0.00 35.35 3.27
303 304 1.971357 TCCAGGACTTGAACCTCTGAC 59.029 52.381 0.00 0.00 35.35 3.51
304 305 1.002544 CCAGGACTTGAACCTCTGACC 59.997 57.143 0.00 0.00 35.35 4.02
305 306 1.974236 CAGGACTTGAACCTCTGACCT 59.026 52.381 0.00 0.00 35.35 3.85
306 307 2.028567 CAGGACTTGAACCTCTGACCTC 60.029 54.545 0.00 0.00 35.35 3.85
307 308 1.971357 GGACTTGAACCTCTGACCTCA 59.029 52.381 0.00 0.00 0.00 3.86
308 309 2.569404 GGACTTGAACCTCTGACCTCAT 59.431 50.000 0.00 0.00 0.00 2.90
309 310 3.008485 GGACTTGAACCTCTGACCTCATT 59.992 47.826 0.00 0.00 0.00 2.57
310 311 3.999663 GACTTGAACCTCTGACCTCATTG 59.000 47.826 0.00 0.00 0.00 2.82
311 312 3.392616 ACTTGAACCTCTGACCTCATTGT 59.607 43.478 0.00 0.00 0.00 2.71
312 313 3.685139 TGAACCTCTGACCTCATTGTC 57.315 47.619 0.00 0.00 35.77 3.18
313 314 2.972021 TGAACCTCTGACCTCATTGTCA 59.028 45.455 0.00 0.00 42.75 3.58
314 315 3.244215 TGAACCTCTGACCTCATTGTCAC 60.244 47.826 0.00 0.00 40.22 3.67
315 316 2.329267 ACCTCTGACCTCATTGTCACA 58.671 47.619 0.00 0.00 40.22 3.58
316 317 2.705658 ACCTCTGACCTCATTGTCACAA 59.294 45.455 0.00 0.00 40.22 3.33
317 318 3.244353 ACCTCTGACCTCATTGTCACAAG 60.244 47.826 0.00 0.00 40.22 3.16
318 319 3.332919 CTCTGACCTCATTGTCACAAGG 58.667 50.000 0.00 0.00 40.22 3.61
319 320 1.808945 CTGACCTCATTGTCACAAGGC 59.191 52.381 0.00 0.00 40.22 4.35
320 321 1.142667 TGACCTCATTGTCACAAGGCA 59.857 47.619 0.00 0.00 40.22 4.75
321 322 1.808945 GACCTCATTGTCACAAGGCAG 59.191 52.381 0.00 0.00 35.29 4.85
322 323 0.524862 CCTCATTGTCACAAGGCAGC 59.475 55.000 0.00 0.00 0.00 5.25
323 324 1.241165 CTCATTGTCACAAGGCAGCA 58.759 50.000 0.00 0.00 0.00 4.41
324 325 1.199327 CTCATTGTCACAAGGCAGCAG 59.801 52.381 0.00 0.00 0.00 4.24
325 326 0.388134 CATTGTCACAAGGCAGCAGC 60.388 55.000 0.00 0.00 41.10 5.25
326 327 0.538977 ATTGTCACAAGGCAGCAGCT 60.539 50.000 0.00 0.00 41.70 4.24
327 328 0.752743 TTGTCACAAGGCAGCAGCTT 60.753 50.000 0.00 0.00 41.70 3.74
328 329 0.752743 TGTCACAAGGCAGCAGCTTT 60.753 50.000 0.00 0.00 41.17 3.51
329 330 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
330 331 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
331 332 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
332 333 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
333 334 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
334 335 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
335 336 0.984230 AGGCAGCAGCTTTACCACTA 59.016 50.000 0.00 0.00 41.70 2.74
336 337 1.087501 GGCAGCAGCTTTACCACTAC 58.912 55.000 0.00 0.00 41.70 2.73
337 338 0.721718 GCAGCAGCTTTACCACTACG 59.278 55.000 0.00 0.00 37.91 3.51
338 339 0.721718 CAGCAGCTTTACCACTACGC 59.278 55.000 0.00 0.00 0.00 4.42
339 340 0.391263 AGCAGCTTTACCACTACGCC 60.391 55.000 0.00 0.00 0.00 5.68
340 341 0.672401 GCAGCTTTACCACTACGCCA 60.672 55.000 0.00 0.00 0.00 5.69
341 342 1.803334 CAGCTTTACCACTACGCCAA 58.197 50.000 0.00 0.00 0.00 4.52
342 343 1.732259 CAGCTTTACCACTACGCCAAG 59.268 52.381 0.00 0.00 0.00 3.61
343 344 1.084289 GCTTTACCACTACGCCAAGG 58.916 55.000 0.00 0.00 0.00 3.61
344 345 1.084289 CTTTACCACTACGCCAAGGC 58.916 55.000 0.00 0.00 37.85 4.35
345 346 0.688487 TTTACCACTACGCCAAGGCT 59.312 50.000 9.73 0.00 39.32 4.58
346 347 0.248289 TTACCACTACGCCAAGGCTC 59.752 55.000 9.73 0.00 39.32 4.70
347 348 1.610554 TACCACTACGCCAAGGCTCC 61.611 60.000 9.73 0.00 39.32 4.70
348 349 2.660064 CCACTACGCCAAGGCTCCT 61.660 63.158 9.73 0.00 39.32 3.69
349 350 1.153549 CACTACGCCAAGGCTCCTC 60.154 63.158 9.73 0.00 39.32 3.71
350 351 1.305381 ACTACGCCAAGGCTCCTCT 60.305 57.895 9.73 0.00 39.32 3.69
351 352 0.905337 ACTACGCCAAGGCTCCTCTT 60.905 55.000 9.73 0.00 39.32 2.85
352 353 0.250513 CTACGCCAAGGCTCCTCTTT 59.749 55.000 9.73 0.00 39.32 2.52
353 354 0.690762 TACGCCAAGGCTCCTCTTTT 59.309 50.000 9.73 0.00 39.32 2.27
354 355 0.178990 ACGCCAAGGCTCCTCTTTTT 60.179 50.000 9.73 0.00 39.32 1.94
409 410 7.725251 TCTTGGCAATAACAAATTTCTCTGTT 58.275 30.769 0.00 0.00 39.13 3.16
448 451 9.664332 ATCTCTGTTATAGCATATGACAATTCC 57.336 33.333 6.97 0.00 0.00 3.01
468 471 8.824781 CAATTCCATTGTGTTAAAAACATGACA 58.175 29.630 0.00 0.00 44.35 3.58
516 521 3.884037 TTTTGGAGGGAAAGCTCTCTT 57.116 42.857 0.00 0.00 41.60 2.85
517 522 2.867109 TTGGAGGGAAAGCTCTCTTG 57.133 50.000 0.00 0.00 41.60 3.02
522 527 1.349357 AGGGAAAGCTCTCTTGTGACC 59.651 52.381 0.00 0.00 31.78 4.02
529 534 1.404315 GCTCTCTTGTGACCCCGTTAG 60.404 57.143 0.00 0.00 0.00 2.34
536 541 0.735287 GTGACCCCGTTAGCTCGAAC 60.735 60.000 0.00 0.00 0.00 3.95
537 542 1.180456 TGACCCCGTTAGCTCGAACA 61.180 55.000 0.00 0.00 0.00 3.18
540 545 0.037605 CCCCGTTAGCTCGAACAAGT 60.038 55.000 0.00 0.00 0.00 3.16
543 548 2.251893 CCGTTAGCTCGAACAAGTCTC 58.748 52.381 0.00 0.00 0.00 3.36
551 556 1.145803 CGAACAAGTCTCCCGGAAAC 58.854 55.000 0.73 0.00 0.00 2.78
620 625 9.684702 TCCCTACTGGAGTCCTATAAAAATTAT 57.315 33.333 11.33 0.00 38.61 1.28
756 768 0.875728 CCATCTAGCTACGGACCTCG 59.124 60.000 0.00 0.00 45.88 4.63
886 922 3.703001 AGATCCCCCATTTATACGCAG 57.297 47.619 0.00 0.00 0.00 5.18
897 933 1.158484 TATACGCAGAGCTCGCTCGT 61.158 55.000 25.42 25.42 46.90 4.18
903 939 2.277628 GAGCTCGCTCGTTCCTCG 60.278 66.667 0.00 0.00 41.41 4.63
924 992 3.677148 CGCCAGAGATCACATACACAAGT 60.677 47.826 0.00 0.00 0.00 3.16
926 994 5.419542 GCCAGAGATCACATACACAAGTAA 58.580 41.667 0.00 0.00 33.13 2.24
930 998 6.533012 CAGAGATCACATACACAAGTAACCAG 59.467 42.308 0.00 0.00 33.13 4.00
1167 1238 2.097918 GACAGCGACGACGACGAT 59.902 61.111 22.94 14.51 42.66 3.73
1263 1353 3.056250 AGGTCATGAGTAACAGCAGAGTG 60.056 47.826 0.00 0.00 0.00 3.51
1282 1374 3.873361 AGTGATATGTCTTGCGTTGATGG 59.127 43.478 0.00 0.00 0.00 3.51
1799 1909 3.317150 GGCCATTAACAAGCAAGAACAC 58.683 45.455 0.00 0.00 0.00 3.32
1819 1929 0.882927 TATAATTGAGCCGCCCGTGC 60.883 55.000 0.00 0.00 0.00 5.34
1848 1958 2.202756 CGCCGACCTGCTTAGACC 60.203 66.667 0.00 0.00 0.00 3.85
1886 1996 3.331150 TGTGCTCATCGGTATTTCGTTT 58.669 40.909 0.00 0.00 0.00 3.60
1887 1997 4.496360 TGTGCTCATCGGTATTTCGTTTA 58.504 39.130 0.00 0.00 0.00 2.01
1888 1998 4.930405 TGTGCTCATCGGTATTTCGTTTAA 59.070 37.500 0.00 0.00 0.00 1.52
1889 1999 5.583061 TGTGCTCATCGGTATTTCGTTTAAT 59.417 36.000 0.00 0.00 0.00 1.40
1966 2078 1.912110 GTACGAGATGTGTGACGAAGC 59.088 52.381 0.00 0.00 0.00 3.86
1973 2085 2.031012 TGTGACGAAGCTGGCAGG 59.969 61.111 17.64 1.38 0.00 4.85
1979 2092 0.179018 ACGAAGCTGGCAGGTTTTCT 60.179 50.000 30.23 10.90 35.86 2.52
2000 2113 1.550659 GCGTCTTTGGCGTCGTTGTA 61.551 55.000 0.00 0.00 0.00 2.41
2011 2124 2.222976 GCGTCGTTGTAGATTCGAGAGA 60.223 50.000 0.00 0.00 34.33 3.10
2012 2125 3.599338 CGTCGTTGTAGATTCGAGAGAG 58.401 50.000 0.00 0.00 43.69 3.20
2013 2126 3.306434 CGTCGTTGTAGATTCGAGAGAGA 59.694 47.826 0.00 0.00 43.69 3.10
2014 2127 4.549298 CGTCGTTGTAGATTCGAGAGAGAG 60.549 50.000 0.00 0.00 43.69 3.20
2033 2146 4.925068 AGAGTGCTGTTGTGATTTTGTTC 58.075 39.130 0.00 0.00 0.00 3.18
2061 2174 1.334960 CCTTGAAGAATTTGTGCGCGT 60.335 47.619 8.43 0.00 0.00 6.01
2062 2175 2.095969 CCTTGAAGAATTTGTGCGCGTA 60.096 45.455 8.43 0.00 0.00 4.42
2063 2176 3.550561 CTTGAAGAATTTGTGCGCGTAA 58.449 40.909 8.43 0.00 0.00 3.18
2064 2177 3.822594 TGAAGAATTTGTGCGCGTAAT 57.177 38.095 8.43 0.00 0.00 1.89
2081 2194 5.388061 CGCGTAATTAATCGTAATCCCAGTG 60.388 44.000 0.00 0.00 0.00 3.66
2098 2211 3.368739 CCAGTGACTCAGATGCATGTACA 60.369 47.826 2.46 0.00 0.00 2.90
2106 2219 7.059202 ACTCAGATGCATGTACATTCTGATA 57.941 36.000 27.23 14.23 35.55 2.15
2109 2222 8.913487 TCAGATGCATGTACATTCTGATATTT 57.087 30.769 24.97 3.50 33.35 1.40
2129 2242 2.572290 TCAGAGCTGCATCAATCATGG 58.428 47.619 1.02 0.00 32.37 3.66
2215 3745 6.970484 ACATACAAACTGAAATGAGTGAACC 58.030 36.000 0.00 0.00 0.00 3.62
2218 3748 6.279513 ACAAACTGAAATGAGTGAACCAAA 57.720 33.333 0.00 0.00 0.00 3.28
2219 3749 6.099341 ACAAACTGAAATGAGTGAACCAAAC 58.901 36.000 0.00 0.00 0.00 2.93
2220 3750 4.552166 ACTGAAATGAGTGAACCAAACG 57.448 40.909 0.00 0.00 0.00 3.60
2221 3751 3.243068 ACTGAAATGAGTGAACCAAACGC 60.243 43.478 0.00 0.00 0.00 4.84
2222 3752 2.685388 TGAAATGAGTGAACCAAACGCA 59.315 40.909 0.00 0.00 0.00 5.24
2223 3753 2.774439 AATGAGTGAACCAAACGCAC 57.226 45.000 0.00 0.00 29.93 5.34
2225 3755 0.730265 TGAGTGAACCAAACGCACAC 59.270 50.000 0.00 0.00 35.08 3.82
2226 3756 1.014352 GAGTGAACCAAACGCACACT 58.986 50.000 0.00 0.00 43.10 3.55
2228 3758 2.210116 AGTGAACCAAACGCACACTAG 58.790 47.619 0.00 0.00 39.52 2.57
2229 3759 1.937899 GTGAACCAAACGCACACTAGT 59.062 47.619 0.00 0.00 32.96 2.57
2230 3760 2.033151 GTGAACCAAACGCACACTAGTC 60.033 50.000 0.00 0.00 32.96 2.59
2231 3761 2.159014 TGAACCAAACGCACACTAGTCT 60.159 45.455 0.00 0.00 0.00 3.24
2236 3766 3.367932 CCAAACGCACACTAGTCTGTATG 59.632 47.826 0.00 0.00 0.00 2.39
2312 3842 7.784037 TGAGTACTTGTTAGTTTAGTTGTGGA 58.216 34.615 0.00 0.00 35.78 4.02
2318 3848 6.105397 TGTTAGTTTAGTTGTGGACCCTAG 57.895 41.667 0.00 0.00 0.00 3.02
2319 3849 3.697619 AGTTTAGTTGTGGACCCTAGC 57.302 47.619 0.00 0.00 0.00 3.42
2398 3928 2.135933 CCACTCCTCGTGTTGTTTCTC 58.864 52.381 0.00 0.00 42.20 2.87
2403 3933 2.143925 CCTCGTGTTGTTTCTCCTTCC 58.856 52.381 0.00 0.00 0.00 3.46
2428 3958 4.103153 TGGATATCTTTCTACCCAAGCTGG 59.897 45.833 2.05 0.00 37.25 4.85
2496 4029 3.181520 GCAGCACCGAATATATAAAGGCG 60.182 47.826 0.00 0.00 0.00 5.52
2498 4031 3.994392 AGCACCGAATATATAAAGGCGTG 59.006 43.478 0.00 0.00 0.00 5.34
2499 4032 3.991773 GCACCGAATATATAAAGGCGTGA 59.008 43.478 0.00 0.00 0.00 4.35
2500 4033 4.143179 GCACCGAATATATAAAGGCGTGAC 60.143 45.833 0.00 0.00 0.00 3.67
2501 4034 4.986034 CACCGAATATATAAAGGCGTGACA 59.014 41.667 0.00 0.00 0.00 3.58
2502 4035 5.464057 CACCGAATATATAAAGGCGTGACAA 59.536 40.000 0.00 0.00 0.00 3.18
2516 4049 3.242608 GCGTGACAAACTAAAGTGAAGCA 60.243 43.478 0.00 0.00 0.00 3.91
2526 4059 3.890936 AGTGAAGCAGGAGCGCACC 62.891 63.158 16.88 16.88 45.64 5.01
2559 4092 3.350612 GCACGCACGGCTGGTTAA 61.351 61.111 0.00 0.00 0.00 2.01
2560 4093 2.899044 GCACGCACGGCTGGTTAAA 61.899 57.895 0.00 0.00 0.00 1.52
2561 4094 1.082366 CACGCACGGCTGGTTAAAC 60.082 57.895 0.00 0.00 0.00 2.01
2566 4099 1.223187 CACGGCTGGTTAAACGACTT 58.777 50.000 0.00 0.00 0.00 3.01
2598 4131 1.064611 TGACACGACCAAAGGGGAAAA 60.065 47.619 0.00 0.00 41.15 2.29
2632 4165 2.078392 CAAAGCATTGGTTTGGCATCC 58.922 47.619 26.18 0.00 44.18 3.51
2633 4166 1.350071 AAGCATTGGTTTGGCATCCA 58.650 45.000 7.66 7.66 0.00 3.41
2635 4168 0.737019 GCATTGGTTTGGCATCCACG 60.737 55.000 10.70 7.24 30.78 4.94
2636 4169 0.108709 CATTGGTTTGGCATCCACGG 60.109 55.000 10.70 3.96 30.78 4.94
2637 4170 1.887344 ATTGGTTTGGCATCCACGGC 61.887 55.000 10.70 0.00 30.78 5.68
2638 4171 4.114997 GGTTTGGCATCCACGGCG 62.115 66.667 4.80 4.80 30.78 6.46
2639 4172 3.361977 GTTTGGCATCCACGGCGT 61.362 61.111 6.77 6.77 30.78 5.68
2676 4209 4.443266 AGCACTCCGGCGCTCTTC 62.443 66.667 7.64 0.00 39.27 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.229675 TGCCATGATACGCAGAGAAG 57.770 50.000 0.00 0.00 0.00 2.85
3 4 2.916702 ATTGCCATGATACGCAGAGA 57.083 45.000 0.00 0.00 36.14 3.10
5 6 1.866601 CGAATTGCCATGATACGCAGA 59.133 47.619 0.00 0.00 36.14 4.26
6 7 1.661178 GCGAATTGCCATGATACGCAG 60.661 52.381 0.00 0.00 43.18 5.18
7 8 0.307453 GCGAATTGCCATGATACGCA 59.693 50.000 0.00 0.00 43.18 5.24
8 9 3.077339 GCGAATTGCCATGATACGC 57.923 52.632 0.00 0.00 37.76 4.42
18 19 1.079956 TTGCACCATGGCGAATTGC 60.080 52.632 13.04 14.54 45.38 3.56
19 20 0.038435 TGTTGCACCATGGCGAATTG 60.038 50.000 13.04 2.88 36.28 2.32
20 21 0.896923 ATGTTGCACCATGGCGAATT 59.103 45.000 13.04 0.00 36.28 2.17
21 22 0.173935 CATGTTGCACCATGGCGAAT 59.826 50.000 15.96 0.00 38.83 3.34
22 23 1.585517 CATGTTGCACCATGGCGAA 59.414 52.632 15.96 0.00 38.83 4.70
23 24 3.276109 CATGTTGCACCATGGCGA 58.724 55.556 15.96 0.00 38.83 5.54
27 28 2.004017 GAATTGCCATGTTGCACCATG 58.996 47.619 16.72 16.72 41.88 3.66
28 29 1.065998 GGAATTGCCATGTTGCACCAT 60.066 47.619 0.00 0.00 41.88 3.55
29 30 0.321021 GGAATTGCCATGTTGCACCA 59.679 50.000 0.00 0.00 41.88 4.17
30 31 0.609662 AGGAATTGCCATGTTGCACC 59.390 50.000 0.00 0.00 41.88 5.01
31 32 1.673626 CCAGGAATTGCCATGTTGCAC 60.674 52.381 0.00 0.00 41.88 4.57
32 33 0.609151 CCAGGAATTGCCATGTTGCA 59.391 50.000 0.00 0.00 40.02 4.08
33 34 0.896923 TCCAGGAATTGCCATGTTGC 59.103 50.000 0.00 0.00 40.02 4.17
34 35 4.342951 ACATATCCAGGAATTGCCATGTTG 59.657 41.667 0.00 0.00 40.02 3.33
35 36 4.342951 CACATATCCAGGAATTGCCATGTT 59.657 41.667 0.00 0.00 40.02 2.71
36 37 3.893200 CACATATCCAGGAATTGCCATGT 59.107 43.478 0.00 0.00 40.02 3.21
37 38 3.257375 CCACATATCCAGGAATTGCCATG 59.743 47.826 0.00 0.00 40.02 3.66
38 39 3.503365 CCACATATCCAGGAATTGCCAT 58.497 45.455 0.00 0.00 40.02 4.40
39 40 2.424667 CCCACATATCCAGGAATTGCCA 60.425 50.000 0.00 0.00 40.02 4.92
40 41 2.242043 CCCACATATCCAGGAATTGCC 58.758 52.381 0.00 0.00 0.00 4.52
41 42 2.158475 TCCCCACATATCCAGGAATTGC 60.158 50.000 0.00 0.00 0.00 3.56
42 43 3.882102 TCCCCACATATCCAGGAATTG 57.118 47.619 0.00 0.00 0.00 2.32
43 44 3.793827 AGTTCCCCACATATCCAGGAATT 59.206 43.478 0.00 0.00 38.77 2.17
44 45 3.407209 AGTTCCCCACATATCCAGGAAT 58.593 45.455 0.00 0.00 38.77 3.01
45 46 2.858644 AGTTCCCCACATATCCAGGAA 58.141 47.619 0.00 0.00 34.27 3.36
46 47 2.587060 AGTTCCCCACATATCCAGGA 57.413 50.000 0.00 0.00 0.00 3.86
47 48 2.158608 GGAAGTTCCCCACATATCCAGG 60.159 54.545 11.17 0.00 0.00 4.45
48 49 3.214696 GGAAGTTCCCCACATATCCAG 57.785 52.381 11.17 0.00 0.00 3.86
60 61 3.611970 GGCTAAGAGAAAGGGAAGTTCC 58.388 50.000 13.99 13.99 35.23 3.62
61 62 3.009143 TGGGCTAAGAGAAAGGGAAGTTC 59.991 47.826 0.00 0.00 0.00 3.01
62 63 2.986728 TGGGCTAAGAGAAAGGGAAGTT 59.013 45.455 0.00 0.00 0.00 2.66
63 64 2.306219 GTGGGCTAAGAGAAAGGGAAGT 59.694 50.000 0.00 0.00 0.00 3.01
64 65 2.356227 GGTGGGCTAAGAGAAAGGGAAG 60.356 54.545 0.00 0.00 0.00 3.46
65 66 1.633945 GGTGGGCTAAGAGAAAGGGAA 59.366 52.381 0.00 0.00 0.00 3.97
66 67 1.286248 GGTGGGCTAAGAGAAAGGGA 58.714 55.000 0.00 0.00 0.00 4.20
67 68 0.991920 TGGTGGGCTAAGAGAAAGGG 59.008 55.000 0.00 0.00 0.00 3.95
68 69 1.630878 AGTGGTGGGCTAAGAGAAAGG 59.369 52.381 0.00 0.00 0.00 3.11
69 70 3.008485 AGAAGTGGTGGGCTAAGAGAAAG 59.992 47.826 0.00 0.00 0.00 2.62
70 71 2.979678 AGAAGTGGTGGGCTAAGAGAAA 59.020 45.455 0.00 0.00 0.00 2.52
71 72 2.621070 AGAAGTGGTGGGCTAAGAGAA 58.379 47.619 0.00 0.00 0.00 2.87
72 73 2.327325 AGAAGTGGTGGGCTAAGAGA 57.673 50.000 0.00 0.00 0.00 3.10
73 74 3.008485 AGAAAGAAGTGGTGGGCTAAGAG 59.992 47.826 0.00 0.00 0.00 2.85
74 75 2.979678 AGAAAGAAGTGGTGGGCTAAGA 59.020 45.455 0.00 0.00 0.00 2.10
75 76 3.425162 AGAAAGAAGTGGTGGGCTAAG 57.575 47.619 0.00 0.00 0.00 2.18
76 77 3.908103 AGTAGAAAGAAGTGGTGGGCTAA 59.092 43.478 0.00 0.00 0.00 3.09
77 78 3.517612 AGTAGAAAGAAGTGGTGGGCTA 58.482 45.455 0.00 0.00 0.00 3.93
78 79 2.339769 AGTAGAAAGAAGTGGTGGGCT 58.660 47.619 0.00 0.00 0.00 5.19
79 80 2.861147 AGTAGAAAGAAGTGGTGGGC 57.139 50.000 0.00 0.00 0.00 5.36
80 81 4.527038 TCTGTAGTAGAAAGAAGTGGTGGG 59.473 45.833 0.00 0.00 30.84 4.61
81 82 5.723672 TCTGTAGTAGAAAGAAGTGGTGG 57.276 43.478 0.00 0.00 30.84 4.61
93 94 5.105106 TCGGAATTTGCCATTCTGTAGTAGA 60.105 40.000 12.19 0.00 36.19 2.59
94 95 5.116180 TCGGAATTTGCCATTCTGTAGTAG 58.884 41.667 12.19 0.00 36.19 2.57
95 96 5.092554 TCGGAATTTGCCATTCTGTAGTA 57.907 39.130 12.19 0.00 36.19 1.82
96 97 3.950397 TCGGAATTTGCCATTCTGTAGT 58.050 40.909 12.19 0.00 36.19 2.73
97 98 4.963276 TTCGGAATTTGCCATTCTGTAG 57.037 40.909 12.19 1.85 36.19 2.74
98 99 5.010112 TGTTTTCGGAATTTGCCATTCTGTA 59.990 36.000 12.19 3.20 36.19 2.74
99 100 4.202202 TGTTTTCGGAATTTGCCATTCTGT 60.202 37.500 12.19 0.00 36.19 3.41
100 101 4.150451 GTGTTTTCGGAATTTGCCATTCTG 59.850 41.667 7.85 7.85 36.11 3.02
101 102 4.202202 TGTGTTTTCGGAATTTGCCATTCT 60.202 37.500 5.87 0.00 0.00 2.40
102 103 4.054671 TGTGTTTTCGGAATTTGCCATTC 58.945 39.130 0.00 0.00 0.00 2.67
103 104 4.065321 TGTGTTTTCGGAATTTGCCATT 57.935 36.364 0.00 0.00 0.00 3.16
104 105 3.742433 TGTGTTTTCGGAATTTGCCAT 57.258 38.095 0.00 0.00 0.00 4.40
105 106 3.068732 TCATGTGTTTTCGGAATTTGCCA 59.931 39.130 0.00 0.00 0.00 4.92
106 107 3.428534 GTCATGTGTTTTCGGAATTTGCC 59.571 43.478 0.00 0.00 0.00 4.52
107 108 4.047822 TGTCATGTGTTTTCGGAATTTGC 58.952 39.130 0.00 0.00 0.00 3.68
108 109 6.768029 ATTGTCATGTGTTTTCGGAATTTG 57.232 33.333 0.00 0.00 0.00 2.32
109 110 7.784633 AAATTGTCATGTGTTTTCGGAATTT 57.215 28.000 0.00 0.00 0.00 1.82
110 111 7.710475 AGAAAATTGTCATGTGTTTTCGGAATT 59.290 29.630 0.00 0.00 42.42 2.17
111 112 7.209475 AGAAAATTGTCATGTGTTTTCGGAAT 58.791 30.769 0.00 0.00 42.42 3.01
112 113 6.568869 AGAAAATTGTCATGTGTTTTCGGAA 58.431 32.000 0.00 0.00 42.42 4.30
113 114 6.142818 AGAAAATTGTCATGTGTTTTCGGA 57.857 33.333 0.00 0.00 42.42 4.55
114 115 6.344936 CGAAGAAAATTGTCATGTGTTTTCGG 60.345 38.462 0.00 9.44 42.42 4.30
115 116 6.196353 ACGAAGAAAATTGTCATGTGTTTTCG 59.804 34.615 10.63 10.63 42.42 3.46
116 117 7.449934 ACGAAGAAAATTGTCATGTGTTTTC 57.550 32.000 0.00 14.08 39.58 2.29
117 118 7.330700 ACAACGAAGAAAATTGTCATGTGTTTT 59.669 29.630 0.00 0.00 30.82 2.43
118 119 6.811170 ACAACGAAGAAAATTGTCATGTGTTT 59.189 30.769 0.00 0.00 30.82 2.83
119 120 6.329496 ACAACGAAGAAAATTGTCATGTGTT 58.671 32.000 0.00 0.00 30.82 3.32
120 121 5.890334 ACAACGAAGAAAATTGTCATGTGT 58.110 33.333 0.00 0.00 30.82 3.72
121 122 6.253298 ACAACAACGAAGAAAATTGTCATGTG 59.747 34.615 0.00 0.00 35.54 3.21
122 123 6.329496 ACAACAACGAAGAAAATTGTCATGT 58.671 32.000 0.00 0.00 35.54 3.21
123 124 6.810888 ACAACAACGAAGAAAATTGTCATG 57.189 33.333 0.00 0.00 35.54 3.07
124 125 8.349245 TCATACAACAACGAAGAAAATTGTCAT 58.651 29.630 0.00 0.00 35.54 3.06
125 126 7.642194 GTCATACAACAACGAAGAAAATTGTCA 59.358 33.333 0.00 0.00 35.54 3.58
126 127 7.642194 TGTCATACAACAACGAAGAAAATTGTC 59.358 33.333 0.00 0.00 35.54 3.18
127 128 7.476667 TGTCATACAACAACGAAGAAAATTGT 58.523 30.769 0.00 0.00 38.18 2.71
128 129 7.906611 TGTCATACAACAACGAAGAAAATTG 57.093 32.000 0.00 0.00 0.00 2.32
129 130 9.528018 AATTGTCATACAACAACGAAGAAAATT 57.472 25.926 0.00 0.00 41.40 1.82
130 131 9.180678 GAATTGTCATACAACAACGAAGAAAAT 57.819 29.630 0.00 0.00 41.40 1.82
131 132 8.402472 AGAATTGTCATACAACAACGAAGAAAA 58.598 29.630 0.00 0.00 41.40 2.29
132 133 7.925993 AGAATTGTCATACAACAACGAAGAAA 58.074 30.769 0.00 0.00 41.40 2.52
133 134 7.490962 AGAATTGTCATACAACAACGAAGAA 57.509 32.000 0.00 0.00 41.40 2.52
134 135 7.490962 AAGAATTGTCATACAACAACGAAGA 57.509 32.000 0.00 0.00 41.40 2.87
135 136 7.058354 CGAAAGAATTGTCATACAACAACGAAG 59.942 37.037 0.00 0.00 41.40 3.79
136 137 6.848800 CGAAAGAATTGTCATACAACAACGAA 59.151 34.615 0.00 0.00 41.40 3.85
137 138 6.201234 TCGAAAGAATTGTCATACAACAACGA 59.799 34.615 0.00 0.00 36.53 3.85
138 139 6.299966 GTCGAAAGAATTGTCATACAACAACG 59.700 38.462 0.00 0.00 45.01 4.10
139 140 7.352739 AGTCGAAAGAATTGTCATACAACAAC 58.647 34.615 0.00 0.00 45.01 3.32
140 141 7.490962 AGTCGAAAGAATTGTCATACAACAA 57.509 32.000 0.00 0.00 45.01 2.83
141 142 8.771920 ATAGTCGAAAGAATTGTCATACAACA 57.228 30.769 0.00 0.00 45.01 3.33
153 154 9.274206 GCCCTTTTATTCTATAGTCGAAAGAAT 57.726 33.333 14.33 14.33 45.01 2.40
154 155 8.262227 TGCCCTTTTATTCTATAGTCGAAAGAA 58.738 33.333 15.53 0.00 45.01 2.52
155 156 7.788026 TGCCCTTTTATTCTATAGTCGAAAGA 58.212 34.615 15.53 0.00 38.16 2.52
156 157 7.926555 TCTGCCCTTTTATTCTATAGTCGAAAG 59.073 37.037 0.00 6.64 0.00 2.62
157 158 7.709613 GTCTGCCCTTTTATTCTATAGTCGAAA 59.290 37.037 0.00 0.00 0.00 3.46
158 159 7.208080 GTCTGCCCTTTTATTCTATAGTCGAA 58.792 38.462 0.00 0.00 0.00 3.71
159 160 6.239232 GGTCTGCCCTTTTATTCTATAGTCGA 60.239 42.308 0.00 0.00 0.00 4.20
160 161 5.927115 GGTCTGCCCTTTTATTCTATAGTCG 59.073 44.000 0.00 0.00 0.00 4.18
161 162 5.927115 CGGTCTGCCCTTTTATTCTATAGTC 59.073 44.000 0.00 0.00 0.00 2.59
162 163 5.601313 TCGGTCTGCCCTTTTATTCTATAGT 59.399 40.000 0.00 0.00 0.00 2.12
163 164 6.097915 TCGGTCTGCCCTTTTATTCTATAG 57.902 41.667 0.00 0.00 0.00 1.31
164 165 6.464222 CATCGGTCTGCCCTTTTATTCTATA 58.536 40.000 0.00 0.00 0.00 1.31
165 166 5.308825 CATCGGTCTGCCCTTTTATTCTAT 58.691 41.667 0.00 0.00 0.00 1.98
166 167 4.703897 CATCGGTCTGCCCTTTTATTCTA 58.296 43.478 0.00 0.00 0.00 2.10
167 168 3.545703 CATCGGTCTGCCCTTTTATTCT 58.454 45.455 0.00 0.00 0.00 2.40
168 169 2.033424 GCATCGGTCTGCCCTTTTATTC 59.967 50.000 0.00 0.00 36.10 1.75
169 170 2.024414 GCATCGGTCTGCCCTTTTATT 58.976 47.619 0.00 0.00 36.10 1.40
170 171 1.064758 TGCATCGGTCTGCCCTTTTAT 60.065 47.619 3.65 0.00 41.58 1.40
171 172 0.326595 TGCATCGGTCTGCCCTTTTA 59.673 50.000 3.65 0.00 41.58 1.52
172 173 0.323725 ATGCATCGGTCTGCCCTTTT 60.324 50.000 0.00 0.00 41.58 2.27
173 174 1.033746 CATGCATCGGTCTGCCCTTT 61.034 55.000 0.00 0.00 41.58 3.11
174 175 1.452651 CATGCATCGGTCTGCCCTT 60.453 57.895 0.00 0.00 41.58 3.95
175 176 1.337384 TACATGCATCGGTCTGCCCT 61.337 55.000 0.00 0.00 41.58 5.19
176 177 0.882042 CTACATGCATCGGTCTGCCC 60.882 60.000 0.00 0.00 41.58 5.36
177 178 1.502163 GCTACATGCATCGGTCTGCC 61.502 60.000 0.00 0.00 41.58 4.85
178 179 0.531532 AGCTACATGCATCGGTCTGC 60.532 55.000 0.00 1.81 45.94 4.26
179 180 1.495878 GAGCTACATGCATCGGTCTG 58.504 55.000 0.00 0.00 45.94 3.51
180 181 0.390860 GGAGCTACATGCATCGGTCT 59.609 55.000 15.00 4.22 45.94 3.85
181 182 0.601311 GGGAGCTACATGCATCGGTC 60.601 60.000 0.00 3.52 45.94 4.79
182 183 1.337384 TGGGAGCTACATGCATCGGT 61.337 55.000 0.00 0.00 45.94 4.69
183 184 0.035881 ATGGGAGCTACATGCATCGG 59.964 55.000 0.00 0.00 45.94 4.18
184 185 1.888215 AATGGGAGCTACATGCATCG 58.112 50.000 0.00 0.00 45.94 3.84
185 186 2.288030 GCAAATGGGAGCTACATGCATC 60.288 50.000 0.00 0.00 45.94 3.91
186 187 1.684983 GCAAATGGGAGCTACATGCAT 59.315 47.619 0.00 0.00 45.94 3.96
187 188 1.105457 GCAAATGGGAGCTACATGCA 58.895 50.000 0.00 0.00 45.94 3.96
188 189 0.029834 CGCAAATGGGAGCTACATGC 59.970 55.000 0.00 1.50 43.29 4.06
189 190 0.029834 GCGCAAATGGGAGCTACATG 59.970 55.000 0.30 0.00 0.00 3.21
190 191 0.394216 TGCGCAAATGGGAGCTACAT 60.394 50.000 8.16 0.00 34.46 2.29
191 192 1.002746 TGCGCAAATGGGAGCTACA 60.003 52.632 8.16 0.00 34.46 2.74
192 193 1.718757 CCTGCGCAAATGGGAGCTAC 61.719 60.000 13.05 0.00 34.46 3.58
193 194 1.451927 CCTGCGCAAATGGGAGCTA 60.452 57.895 13.05 0.00 34.46 3.32
194 195 2.753043 CCTGCGCAAATGGGAGCT 60.753 61.111 13.05 0.00 34.46 4.09
195 196 3.830192 CCCTGCGCAAATGGGAGC 61.830 66.667 25.15 0.00 43.47 4.70
196 197 2.361610 ACCCTGCGCAAATGGGAG 60.362 61.111 33.19 17.09 43.47 4.30
197 198 2.361104 GACCCTGCGCAAATGGGA 60.361 61.111 33.19 0.28 43.47 4.37
198 199 3.451894 GGACCCTGCGCAAATGGG 61.452 66.667 26.96 26.96 46.07 4.00
199 200 3.814268 CGGACCCTGCGCAAATGG 61.814 66.667 13.05 15.08 0.00 3.16
200 201 3.814268 CCGGACCCTGCGCAAATG 61.814 66.667 13.05 5.12 0.00 2.32
201 202 3.976701 CTCCGGACCCTGCGCAAAT 62.977 63.158 13.05 0.00 0.00 2.32
202 203 4.697756 CTCCGGACCCTGCGCAAA 62.698 66.667 13.05 0.00 0.00 3.68
205 206 4.899239 CATCTCCGGACCCTGCGC 62.899 72.222 0.00 0.00 0.00 6.09
206 207 4.227134 CCATCTCCGGACCCTGCG 62.227 72.222 0.00 0.00 0.00 5.18
207 208 3.866582 CCCATCTCCGGACCCTGC 61.867 72.222 0.00 0.00 0.00 4.85
208 209 2.365635 ACCCATCTCCGGACCCTG 60.366 66.667 0.00 0.00 0.00 4.45
209 210 2.041819 GACCCATCTCCGGACCCT 60.042 66.667 0.00 0.00 0.00 4.34
210 211 2.041819 AGACCCATCTCCGGACCC 60.042 66.667 0.00 0.00 0.00 4.46
211 212 1.381327 TCAGACCCATCTCCGGACC 60.381 63.158 0.00 0.00 30.42 4.46
212 213 1.677637 GGTCAGACCCATCTCCGGAC 61.678 65.000 8.65 0.00 30.42 4.79
213 214 1.381327 GGTCAGACCCATCTCCGGA 60.381 63.158 8.65 2.93 30.42 5.14
214 215 1.685765 TGGTCAGACCCATCTCCGG 60.686 63.158 17.59 0.00 37.50 5.14
215 216 0.972983 AGTGGTCAGACCCATCTCCG 60.973 60.000 17.59 0.00 37.50 4.63
216 217 1.280457 AAGTGGTCAGACCCATCTCC 58.720 55.000 17.59 0.00 37.50 3.71
217 218 2.616510 CCAAAGTGGTCAGACCCATCTC 60.617 54.545 17.59 2.86 37.50 2.75
218 219 1.352352 CCAAAGTGGTCAGACCCATCT 59.648 52.381 17.59 9.81 37.50 2.90
219 220 1.614317 CCCAAAGTGGTCAGACCCATC 60.614 57.143 17.59 7.68 37.50 3.51
220 221 0.405585 CCCAAAGTGGTCAGACCCAT 59.594 55.000 17.59 2.27 37.50 4.00
221 222 0.991355 ACCCAAAGTGGTCAGACCCA 60.991 55.000 17.59 2.36 37.50 4.51
222 223 1.844130 ACCCAAAGTGGTCAGACCC 59.156 57.895 17.59 8.45 37.50 4.46
229 230 5.514500 ACATACAATAGACCCAAAGTGGT 57.486 39.130 0.00 0.00 42.79 4.16
230 231 5.527582 GCTACATACAATAGACCCAAAGTGG 59.472 44.000 0.00 0.00 37.25 4.00
231 232 5.527582 GGCTACATACAATAGACCCAAAGTG 59.472 44.000 0.00 0.00 0.00 3.16
232 233 5.428783 AGGCTACATACAATAGACCCAAAGT 59.571 40.000 0.00 0.00 0.00 2.66
233 234 5.930135 AGGCTACATACAATAGACCCAAAG 58.070 41.667 0.00 0.00 0.00 2.77
234 235 5.968676 AGGCTACATACAATAGACCCAAA 57.031 39.130 0.00 0.00 0.00 3.28
235 236 5.665812 AGAAGGCTACATACAATAGACCCAA 59.334 40.000 0.00 0.00 0.00 4.12
236 237 5.216622 AGAAGGCTACATACAATAGACCCA 58.783 41.667 0.00 0.00 0.00 4.51
237 238 5.540719 AGAGAAGGCTACATACAATAGACCC 59.459 44.000 0.00 0.00 0.00 4.46
238 239 6.658188 AGAGAAGGCTACATACAATAGACC 57.342 41.667 0.00 0.00 0.00 3.85
245 246 8.307483 GCAGAAATATAGAGAAGGCTACATACA 58.693 37.037 0.00 0.00 0.00 2.29
246 247 8.307483 TGCAGAAATATAGAGAAGGCTACATAC 58.693 37.037 0.00 0.00 0.00 2.39
247 248 8.422577 TGCAGAAATATAGAGAAGGCTACATA 57.577 34.615 0.00 0.00 0.00 2.29
248 249 7.308450 TGCAGAAATATAGAGAAGGCTACAT 57.692 36.000 0.00 0.00 0.00 2.29
249 250 6.731292 TGCAGAAATATAGAGAAGGCTACA 57.269 37.500 0.00 0.00 0.00 2.74
250 251 7.437748 TCTTGCAGAAATATAGAGAAGGCTAC 58.562 38.462 0.00 0.00 0.00 3.58
251 252 7.256119 CCTCTTGCAGAAATATAGAGAAGGCTA 60.256 40.741 10.27 0.00 35.48 3.93
252 253 6.464180 CCTCTTGCAGAAATATAGAGAAGGCT 60.464 42.308 10.27 0.00 35.48 4.58
253 254 5.700373 CCTCTTGCAGAAATATAGAGAAGGC 59.300 44.000 10.27 0.00 35.48 4.35
254 255 5.700373 GCCTCTTGCAGAAATATAGAGAAGG 59.300 44.000 10.27 2.05 40.77 3.46
255 256 6.424509 CAGCCTCTTGCAGAAATATAGAGAAG 59.575 42.308 10.27 0.00 44.83 2.85
256 257 6.126940 ACAGCCTCTTGCAGAAATATAGAGAA 60.127 38.462 10.27 0.00 44.83 2.87
257 258 5.365025 ACAGCCTCTTGCAGAAATATAGAGA 59.635 40.000 10.27 0.00 44.83 3.10
258 259 5.609423 ACAGCCTCTTGCAGAAATATAGAG 58.391 41.667 2.87 2.87 44.83 2.43
259 260 5.620738 ACAGCCTCTTGCAGAAATATAGA 57.379 39.130 0.00 0.00 44.83 1.98
260 261 6.238593 GGAAACAGCCTCTTGCAGAAATATAG 60.239 42.308 0.00 0.00 44.83 1.31
261 262 5.590259 GGAAACAGCCTCTTGCAGAAATATA 59.410 40.000 0.00 0.00 44.83 0.86
262 263 4.400567 GGAAACAGCCTCTTGCAGAAATAT 59.599 41.667 0.00 0.00 44.83 1.28
263 264 3.758554 GGAAACAGCCTCTTGCAGAAATA 59.241 43.478 0.00 0.00 44.83 1.40
264 265 2.560105 GGAAACAGCCTCTTGCAGAAAT 59.440 45.455 0.00 0.00 44.83 2.17
265 266 1.956477 GGAAACAGCCTCTTGCAGAAA 59.044 47.619 0.00 0.00 44.83 2.52
266 267 1.133823 TGGAAACAGCCTCTTGCAGAA 60.134 47.619 0.00 0.00 44.83 3.02
267 268 0.473755 TGGAAACAGCCTCTTGCAGA 59.526 50.000 0.00 0.00 44.83 4.26
268 269 3.025924 TGGAAACAGCCTCTTGCAG 57.974 52.632 0.00 0.00 44.83 4.41
279 280 2.777692 AGAGGTTCAAGTCCTGGAAACA 59.222 45.455 0.00 0.00 33.16 2.83
280 281 3.142174 CAGAGGTTCAAGTCCTGGAAAC 58.858 50.000 0.00 0.00 35.20 2.78
281 282 3.045634 TCAGAGGTTCAAGTCCTGGAAA 58.954 45.455 0.00 0.00 35.20 3.13
282 283 2.368875 GTCAGAGGTTCAAGTCCTGGAA 59.631 50.000 0.00 0.00 35.20 3.53
283 284 1.971357 GTCAGAGGTTCAAGTCCTGGA 59.029 52.381 0.00 0.00 35.20 3.86
284 285 1.002544 GGTCAGAGGTTCAAGTCCTGG 59.997 57.143 0.00 0.00 35.20 4.45
285 286 1.974236 AGGTCAGAGGTTCAAGTCCTG 59.026 52.381 0.00 0.00 35.20 3.86
286 287 2.252714 GAGGTCAGAGGTTCAAGTCCT 58.747 52.381 0.00 0.00 38.09 3.85
287 288 1.971357 TGAGGTCAGAGGTTCAAGTCC 59.029 52.381 0.00 0.00 0.00 3.85
288 289 3.971245 ATGAGGTCAGAGGTTCAAGTC 57.029 47.619 0.00 0.00 0.00 3.01
289 290 3.392616 ACAATGAGGTCAGAGGTTCAAGT 59.607 43.478 0.00 0.00 0.00 3.16
290 291 3.999663 GACAATGAGGTCAGAGGTTCAAG 59.000 47.826 0.00 0.00 37.73 3.02
291 292 3.390967 TGACAATGAGGTCAGAGGTTCAA 59.609 43.478 0.00 0.00 42.56 2.69
292 293 2.972021 TGACAATGAGGTCAGAGGTTCA 59.028 45.455 0.00 0.00 42.56 3.18
293 294 3.685139 TGACAATGAGGTCAGAGGTTC 57.315 47.619 0.00 0.00 42.56 3.62
300 301 1.142667 TGCCTTGTGACAATGAGGTCA 59.857 47.619 4.76 0.74 45.06 4.02
301 302 1.808945 CTGCCTTGTGACAATGAGGTC 59.191 52.381 4.76 0.00 38.29 3.85
302 303 1.901591 CTGCCTTGTGACAATGAGGT 58.098 50.000 4.76 0.00 0.00 3.85
303 304 0.524862 GCTGCCTTGTGACAATGAGG 59.475 55.000 4.76 1.05 0.00 3.86
304 305 1.199327 CTGCTGCCTTGTGACAATGAG 59.801 52.381 4.76 0.12 0.00 2.90
305 306 1.241165 CTGCTGCCTTGTGACAATGA 58.759 50.000 4.76 0.00 0.00 2.57
306 307 0.388134 GCTGCTGCCTTGTGACAATG 60.388 55.000 3.85 0.00 0.00 2.82
307 308 0.538977 AGCTGCTGCCTTGTGACAAT 60.539 50.000 12.44 0.00 40.80 2.71
308 309 0.752743 AAGCTGCTGCCTTGTGACAA 60.753 50.000 12.44 0.00 40.80 3.18
309 310 0.752743 AAAGCTGCTGCCTTGTGACA 60.753 50.000 12.44 0.00 40.80 3.58
310 311 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
311 312 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
312 313 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
313 314 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
314 315 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
315 316 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
316 317 0.984230 TAGTGGTAAAGCTGCTGCCT 59.016 50.000 12.44 2.45 40.80 4.75
317 318 1.087501 GTAGTGGTAAAGCTGCTGCC 58.912 55.000 12.44 7.07 40.80 4.85
318 319 0.721718 CGTAGTGGTAAAGCTGCTGC 59.278 55.000 1.35 7.62 40.05 5.25
319 320 0.721718 GCGTAGTGGTAAAGCTGCTG 59.278 55.000 1.35 0.00 0.00 4.41
320 321 0.391263 GGCGTAGTGGTAAAGCTGCT 60.391 55.000 0.00 0.00 0.00 4.24
321 322 0.672401 TGGCGTAGTGGTAAAGCTGC 60.672 55.000 0.00 0.00 0.00 5.25
322 323 1.732259 CTTGGCGTAGTGGTAAAGCTG 59.268 52.381 0.00 0.00 0.00 4.24
323 324 1.338769 CCTTGGCGTAGTGGTAAAGCT 60.339 52.381 0.00 0.00 0.00 3.74
324 325 1.084289 CCTTGGCGTAGTGGTAAAGC 58.916 55.000 0.00 0.00 0.00 3.51
325 326 1.084289 GCCTTGGCGTAGTGGTAAAG 58.916 55.000 0.00 0.00 0.00 1.85
326 327 0.688487 AGCCTTGGCGTAGTGGTAAA 59.312 50.000 5.95 0.00 0.00 2.01
327 328 0.248289 GAGCCTTGGCGTAGTGGTAA 59.752 55.000 5.95 0.00 0.00 2.85
328 329 1.610554 GGAGCCTTGGCGTAGTGGTA 61.611 60.000 5.95 0.00 0.00 3.25
329 330 2.663196 GAGCCTTGGCGTAGTGGT 59.337 61.111 5.95 0.00 0.00 4.16
330 331 2.125106 GGAGCCTTGGCGTAGTGG 60.125 66.667 5.95 0.00 0.00 4.00
331 332 1.153549 GAGGAGCCTTGGCGTAGTG 60.154 63.158 5.95 0.00 0.00 2.74
332 333 0.905337 AAGAGGAGCCTTGGCGTAGT 60.905 55.000 5.95 0.00 0.00 2.73
333 334 0.250513 AAAGAGGAGCCTTGGCGTAG 59.749 55.000 5.95 0.00 0.00 3.51
334 335 0.690762 AAAAGAGGAGCCTTGGCGTA 59.309 50.000 5.95 0.00 0.00 4.42
335 336 0.178990 AAAAAGAGGAGCCTTGGCGT 60.179 50.000 5.95 0.00 0.00 5.68
336 337 2.646121 AAAAAGAGGAGCCTTGGCG 58.354 52.632 5.95 0.00 0.00 5.69
352 353 8.696043 ATCAATGCCATGCTATAGTAGAAAAA 57.304 30.769 0.84 0.00 0.00 1.94
353 354 8.696043 AATCAATGCCATGCTATAGTAGAAAA 57.304 30.769 0.84 0.00 0.00 2.29
354 355 8.696043 AAATCAATGCCATGCTATAGTAGAAA 57.304 30.769 0.84 0.00 0.00 2.52
382 383 8.203485 ACAGAGAAATTTGTTATTGCCAAGAAA 58.797 29.630 0.00 0.00 0.00 2.52
385 386 7.951530 AACAGAGAAATTTGTTATTGCCAAG 57.048 32.000 0.00 0.00 35.86 3.61
423 426 8.650490 TGGAATTGTCATATGCTATAACAGAGA 58.350 33.333 0.00 0.00 0.00 3.10
448 451 9.649024 GGAATTTGTCATGTTTTTAACACAATG 57.351 29.630 0.00 0.00 45.50 2.82
456 459 9.829507 ACATTTCTGGAATTTGTCATGTTTTTA 57.170 25.926 0.00 0.00 0.00 1.52
462 465 5.870978 GGGAACATTTCTGGAATTTGTCATG 59.129 40.000 0.00 0.00 0.00 3.07
464 467 5.010922 CAGGGAACATTTCTGGAATTTGTCA 59.989 40.000 0.00 0.00 0.00 3.58
465 468 5.243730 TCAGGGAACATTTCTGGAATTTGTC 59.756 40.000 0.00 0.00 0.00 3.18
467 470 5.477984 TCTCAGGGAACATTTCTGGAATTTG 59.522 40.000 0.00 0.00 0.00 2.32
468 471 5.644188 TCTCAGGGAACATTTCTGGAATTT 58.356 37.500 0.00 0.00 0.00 1.82
498 503 2.057922 ACAAGAGAGCTTTCCCTCCAA 58.942 47.619 0.00 0.00 32.17 3.53
500 505 1.625818 TCACAAGAGAGCTTTCCCTCC 59.374 52.381 0.00 0.00 32.17 4.30
501 506 2.614229 GGTCACAAGAGAGCTTTCCCTC 60.614 54.545 0.00 0.00 33.41 4.30
516 521 1.180456 TTCGAGCTAACGGGGTCACA 61.180 55.000 0.00 0.00 33.84 3.58
517 522 0.735287 GTTCGAGCTAACGGGGTCAC 60.735 60.000 0.00 0.00 33.84 3.67
522 527 1.067776 AGACTTGTTCGAGCTAACGGG 60.068 52.381 0.00 0.00 31.76 5.28
529 534 1.446272 CCGGGAGACTTGTTCGAGC 60.446 63.158 0.00 0.00 0.00 5.03
536 541 0.865769 CGTTGTTTCCGGGAGACTTG 59.134 55.000 17.52 4.98 0.00 3.16
537 542 0.754472 TCGTTGTTTCCGGGAGACTT 59.246 50.000 17.52 0.00 0.00 3.01
540 545 0.108992 CGATCGTTGTTTCCGGGAGA 60.109 55.000 7.03 0.00 0.00 3.71
543 548 0.441145 GAACGATCGTTGTTTCCGGG 59.559 55.000 36.12 0.00 38.60 5.73
571 576 3.391382 CGTGTCCTCCCTGGGGTC 61.391 72.222 14.00 1.86 36.20 4.46
654 659 8.283291 CAGTGTACTAGAAATTGACCAAGTTTC 58.717 37.037 0.00 4.09 33.24 2.78
698 710 4.648651 TGGGTTCAAGGCTAAGTAAGAAC 58.351 43.478 0.00 0.00 35.77 3.01
699 711 4.986054 TGGGTTCAAGGCTAAGTAAGAA 57.014 40.909 0.00 0.00 0.00 2.52
700 712 4.986054 TTGGGTTCAAGGCTAAGTAAGA 57.014 40.909 0.00 0.00 0.00 2.10
701 713 4.459337 CCTTTGGGTTCAAGGCTAAGTAAG 59.541 45.833 0.00 0.00 33.98 2.34
756 768 4.428615 GAGTAGGCTCTCGATTGTATCC 57.571 50.000 0.00 0.00 38.66 2.59
859 891 0.748005 AAATGGGGGATCTTGTCGCG 60.748 55.000 0.00 0.00 40.50 5.87
886 922 2.277628 CGAGGAACGAGCGAGCTC 60.278 66.667 14.61 14.61 45.77 4.09
897 933 1.489481 ATGTGATCTCTGGCGAGGAA 58.511 50.000 0.00 0.00 37.86 3.36
903 939 3.866651 ACTTGTGTATGTGATCTCTGGC 58.133 45.455 0.00 0.00 0.00 4.85
1167 1238 0.525761 TCGTGTCGAGCATGTCATCA 59.474 50.000 0.00 0.00 35.64 3.07
1263 1353 3.546815 GCACCATCAACGCAAGACATATC 60.547 47.826 0.00 0.00 43.62 1.63
1356 1451 4.473520 ATGAAGGCGCCCGACAGG 62.474 66.667 26.15 0.00 39.47 4.00
1778 1888 3.005791 AGTGTTCTTGCTTGTTAATGGCC 59.994 43.478 0.00 0.00 0.00 5.36
1799 1909 1.148310 CACGGGCGGCTCAATTATAG 58.852 55.000 9.56 0.00 0.00 1.31
1819 1929 2.126618 TCGGCGTGTCTGCTAACG 60.127 61.111 6.85 0.00 42.61 3.18
1832 1942 2.202756 CGGTCTAAGCAGGTCGGC 60.203 66.667 0.00 0.00 0.00 5.54
1848 1958 3.945285 AGCACATGAAAAATACTACCCCG 59.055 43.478 0.00 0.00 0.00 5.73
1886 1996 4.641094 CCGGTATTTGGTGCAAGGTTATTA 59.359 41.667 0.00 0.00 0.00 0.98
1887 1997 3.445805 CCGGTATTTGGTGCAAGGTTATT 59.554 43.478 0.00 0.00 0.00 1.40
1888 1998 3.020984 CCGGTATTTGGTGCAAGGTTAT 58.979 45.455 0.00 0.00 0.00 1.89
1889 1999 2.438411 CCGGTATTTGGTGCAAGGTTA 58.562 47.619 0.00 0.00 0.00 2.85
1966 2078 1.856265 GACGCCAGAAAACCTGCCAG 61.856 60.000 0.00 0.00 41.57 4.85
1973 2085 0.660300 CGCCAAAGACGCCAGAAAAC 60.660 55.000 0.00 0.00 0.00 2.43
1979 2092 4.595538 ACGACGCCAAAGACGCCA 62.596 61.111 0.00 0.00 32.99 5.69
1982 2095 0.433492 CTACAACGACGCCAAAGACG 59.567 55.000 0.00 0.00 35.60 4.18
1983 2096 1.774639 TCTACAACGACGCCAAAGAC 58.225 50.000 0.00 0.00 0.00 3.01
2000 2113 2.722094 ACAGCACTCTCTCTCGAATCT 58.278 47.619 0.00 0.00 0.00 2.40
2011 2124 4.641989 AGAACAAAATCACAACAGCACTCT 59.358 37.500 0.00 0.00 0.00 3.24
2012 2125 4.925068 AGAACAAAATCACAACAGCACTC 58.075 39.130 0.00 0.00 0.00 3.51
2013 2126 4.989279 AGAACAAAATCACAACAGCACT 57.011 36.364 0.00 0.00 0.00 4.40
2014 2127 5.343249 AGAAGAACAAAATCACAACAGCAC 58.657 37.500 0.00 0.00 0.00 4.40
2056 2169 3.429543 TGGGATTACGATTAATTACGCGC 59.570 43.478 5.73 0.00 0.00 6.86
2061 2174 8.014070 TGAGTCACTGGGATTACGATTAATTA 57.986 34.615 0.00 0.00 0.00 1.40
2062 2175 6.884832 TGAGTCACTGGGATTACGATTAATT 58.115 36.000 0.00 0.00 0.00 1.40
2063 2176 6.323996 TCTGAGTCACTGGGATTACGATTAAT 59.676 38.462 0.00 0.00 0.00 1.40
2064 2177 5.655090 TCTGAGTCACTGGGATTACGATTAA 59.345 40.000 0.00 0.00 0.00 1.40
2081 2194 5.354767 TCAGAATGTACATGCATCTGAGTC 58.645 41.667 24.97 11.03 37.40 3.36
2106 2219 4.038042 CCATGATTGATGCAGCTCTGAAAT 59.962 41.667 2.53 0.00 0.00 2.17
2109 2222 2.092592 ACCATGATTGATGCAGCTCTGA 60.093 45.455 2.53 0.00 0.00 3.27
2192 3722 6.969366 TGGTTCACTCATTTCAGTTTGTATG 58.031 36.000 0.00 0.00 0.00 2.39
2197 3727 5.339990 CGTTTGGTTCACTCATTTCAGTTT 58.660 37.500 0.00 0.00 0.00 2.66
2215 3745 3.181530 GCATACAGACTAGTGTGCGTTTG 60.182 47.826 19.31 12.33 44.57 2.93
2218 3748 2.279582 GCATACAGACTAGTGTGCGT 57.720 50.000 19.31 5.97 44.57 5.24
2221 3751 5.254339 TCAGATGCATACAGACTAGTGTG 57.746 43.478 17.93 17.93 34.23 3.82
2222 3752 6.477053 AATCAGATGCATACAGACTAGTGT 57.523 37.500 0.00 0.00 34.21 3.55
2223 3753 8.355913 TCTTAATCAGATGCATACAGACTAGTG 58.644 37.037 0.00 0.00 0.00 2.74
2225 3755 9.755804 TTTCTTAATCAGATGCATACAGACTAG 57.244 33.333 0.00 0.00 0.00 2.57
2270 3800 9.099454 CAAGTACTCATCCCTCTGTTTATAAAC 57.901 37.037 19.44 19.44 39.33 2.01
2287 3817 7.707893 GTCCACAACTAAACTAACAAGTACTCA 59.292 37.037 0.00 0.00 0.00 3.41
2288 3818 7.170489 GGTCCACAACTAAACTAACAAGTACTC 59.830 40.741 0.00 0.00 0.00 2.59
2312 3842 3.679389 CTGTTCTGAAACATGCTAGGGT 58.321 45.455 0.00 0.00 44.18 4.34
2318 3848 3.631145 TTCTGCTGTTCTGAAACATGC 57.369 42.857 0.00 0.00 44.18 4.06
2355 3885 4.359706 GAAAACAGATTCGCAACAAAGGT 58.640 39.130 0.00 0.00 0.00 3.50
2398 3928 4.262506 GGGTAGAAAGATATCCACGGAAGG 60.263 50.000 0.00 0.00 0.00 3.46
2403 3933 4.058817 GCTTGGGTAGAAAGATATCCACG 58.941 47.826 0.00 0.00 35.62 4.94
2428 3958 3.803778 CCTCATGCAAGTGGAACAAAAAC 59.196 43.478 4.00 0.00 44.16 2.43
2496 4029 4.574828 TCCTGCTTCACTTTAGTTTGTCAC 59.425 41.667 0.00 0.00 0.00 3.67
2498 4031 4.319839 GCTCCTGCTTCACTTTAGTTTGTC 60.320 45.833 0.00 0.00 36.03 3.18
2499 4032 3.565902 GCTCCTGCTTCACTTTAGTTTGT 59.434 43.478 0.00 0.00 36.03 2.83
2500 4033 3.364366 CGCTCCTGCTTCACTTTAGTTTG 60.364 47.826 0.00 0.00 36.97 2.93
2501 4034 2.808543 CGCTCCTGCTTCACTTTAGTTT 59.191 45.455 0.00 0.00 36.97 2.66
2502 4035 2.417719 CGCTCCTGCTTCACTTTAGTT 58.582 47.619 0.00 0.00 36.97 2.24
2542 4075 2.899044 TTTAACCAGCCGTGCGTGC 61.899 57.895 0.00 0.00 0.00 5.34
2543 4076 1.082366 GTTTAACCAGCCGTGCGTG 60.082 57.895 0.00 0.00 0.00 5.34
2544 4077 2.600475 CGTTTAACCAGCCGTGCGT 61.600 57.895 0.00 0.00 0.00 5.24
2545 4078 2.172419 CGTTTAACCAGCCGTGCG 59.828 61.111 0.00 0.00 0.00 5.34
2546 4079 1.205820 GTCGTTTAACCAGCCGTGC 59.794 57.895 0.00 0.00 0.00 5.34
2547 4080 1.070175 CAAGTCGTTTAACCAGCCGTG 60.070 52.381 0.00 0.00 0.00 4.94
2548 4081 1.223187 CAAGTCGTTTAACCAGCCGT 58.777 50.000 0.00 0.00 0.00 5.68
2549 4082 1.193874 GACAAGTCGTTTAACCAGCCG 59.806 52.381 0.00 0.00 0.00 5.52
2550 4083 2.215196 TGACAAGTCGTTTAACCAGCC 58.785 47.619 0.00 0.00 0.00 4.85
2551 4084 3.955771 TTGACAAGTCGTTTAACCAGC 57.044 42.857 0.00 0.00 0.00 4.85
2552 4085 5.907391 GTCATTTGACAAGTCGTTTAACCAG 59.093 40.000 5.84 0.00 44.18 4.00
2553 4086 5.812652 GTCATTTGACAAGTCGTTTAACCA 58.187 37.500 5.84 0.00 44.18 3.67
2598 4131 1.074405 TGCTTTGGCATCCAGTTCTCT 59.926 47.619 0.00 0.00 44.28 3.10
2623 4156 3.053291 GACGCCGTGGATGCCAAA 61.053 61.111 0.00 0.00 34.18 3.28
2673 4206 3.691342 TCGACCGCAGTGGGGAAG 61.691 66.667 31.26 22.36 44.64 3.46
2674 4207 3.998672 GTCGACCGCAGTGGGGAA 61.999 66.667 31.26 13.86 44.64 3.97
2676 4209 3.605749 AATGTCGACCGCAGTGGGG 62.606 63.158 23.87 23.87 44.64 4.96
2677 4210 2.047274 AATGTCGACCGCAGTGGG 60.047 61.111 14.12 0.00 44.64 4.61
2722 4255 3.000623 CACGGATCACAATCGAAGACATG 59.999 47.826 0.00 0.00 42.51 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.