Multiple sequence alignment - TraesCS5A01G238300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G238300 chr5A 100.000 3340 0 0 1 3340 454718980 454722319 0.000000e+00 6168.0
1 TraesCS5A01G238300 chr5A 95.960 99 2 2 3136 3232 641790104 641790202 3.450000e-35 159.0
2 TraesCS5A01G238300 chr5A 83.673 147 20 4 756 900 454719532 454719676 5.810000e-28 135.0
3 TraesCS5A01G238300 chr5A 83.673 147 20 4 553 697 454719735 454719879 5.810000e-28 135.0
4 TraesCS5A01G238300 chr5A 96.364 55 2 0 695 749 692255888 692255834 1.280000e-14 91.6
5 TraesCS5A01G238300 chr5B 91.752 1661 61 25 796 2417 417874153 417875776 0.000000e+00 2239.0
6 TraesCS5A01G238300 chr5B 95.833 384 12 3 2 383 417864124 417864505 4.730000e-173 617.0
7 TraesCS5A01G238300 chr5B 85.714 154 15 4 2456 2609 417875785 417875931 4.460000e-34 156.0
8 TraesCS5A01G238300 chr5D 92.168 1545 43 37 928 2417 353762514 353764035 0.000000e+00 2111.0
9 TraesCS5A01G238300 chr5D 88.345 695 41 8 43 697 353760316 353761010 0.000000e+00 798.0
10 TraesCS5A01G238300 chr5D 88.300 641 36 10 2456 3095 353764044 353764646 0.000000e+00 732.0
11 TraesCS5A01G238300 chr5D 92.453 106 7 1 3144 3248 182800927 182800822 2.080000e-32 150.0
12 TraesCS5A01G238300 chr6A 74.301 965 188 41 1392 2313 604295184 604296131 1.470000e-93 353.0
13 TraesCS5A01G238300 chr6A 74.220 962 188 41 1392 2310 604384997 604385941 6.860000e-92 348.0
14 TraesCS5A01G238300 chr6A 91.667 108 7 2 3140 3246 542602781 542602887 7.470000e-32 148.0
15 TraesCS5A01G238300 chr6A 84.545 110 13 4 3233 3340 22680110 22680003 4.560000e-19 106.0
16 TraesCS5A01G238300 chr6D 75.745 738 144 24 1601 2313 457472696 457471969 4.130000e-89 339.0
17 TraesCS5A01G238300 chr6D 94.643 56 3 0 3095 3150 389338533 389338478 1.650000e-13 87.9
18 TraesCS5A01G238300 chr6B 75.679 736 142 22 1601 2310 695937608 695938332 1.920000e-87 333.0
19 TraesCS5A01G238300 chr6B 75.365 479 76 35 1388 1837 65859585 65860050 3.400000e-45 193.0
20 TraesCS5A01G238300 chr6B 74.947 475 83 29 1388 1837 65835211 65835674 5.690000e-43 185.0
21 TraesCS5A01G238300 chr6B 83.784 111 13 3 3233 3340 225313451 225313343 2.120000e-17 100.0
22 TraesCS5A01G238300 chr6B 84.615 104 10 5 3232 3331 48958223 48958324 7.630000e-17 99.0
23 TraesCS5A01G238300 chr2D 77.919 471 69 29 1388 1837 462197729 462198185 9.190000e-66 261.0
24 TraesCS5A01G238300 chr2D 89.441 161 17 0 1232 1392 16057134 16057294 1.570000e-48 204.0
25 TraesCS5A01G238300 chr2D 81.048 248 34 11 1597 1837 6463294 6463535 5.690000e-43 185.0
26 TraesCS5A01G238300 chr2D 87.963 108 9 4 3234 3340 561232239 561232343 1.260000e-24 124.0
27 TraesCS5A01G238300 chr2D 84.821 112 11 5 3233 3340 398672889 398672780 1.270000e-19 108.0
28 TraesCS5A01G238300 chr2B 77.399 469 79 24 1388 1837 544982008 544982468 1.540000e-63 254.0
29 TraesCS5A01G238300 chr2B 90.062 161 16 0 1232 1392 28323949 28324109 3.380000e-50 209.0
30 TraesCS5A01G238300 chr2B 86.400 125 14 3 1388 1510 319360673 319360796 2.090000e-27 134.0
31 TraesCS5A01G238300 chr2B 84.545 110 17 0 3123 3232 777636918 777636809 3.520000e-20 110.0
32 TraesCS5A01G238300 chr2B 85.185 108 13 3 3235 3340 481125376 481125482 1.270000e-19 108.0
33 TraesCS5A01G238300 chr2A 77.615 478 66 32 1388 1837 607476471 607476935 5.530000e-63 252.0
34 TraesCS5A01G238300 chr2A 88.820 161 18 0 1232 1392 17954364 17954524 7.310000e-47 198.0
35 TraesCS5A01G238300 chr2A 85.211 142 18 3 1388 1527 610058874 610059014 3.470000e-30 143.0
36 TraesCS5A01G238300 chr2A 78.733 221 39 5 1629 1845 17954862 17955078 1.250000e-29 141.0
37 TraesCS5A01G238300 chr2A 85.321 109 14 2 3234 3340 372373221 372373329 9.800000e-21 111.0
38 TraesCS5A01G238300 chr2A 96.491 57 2 0 693 749 765804681 765804737 9.870000e-16 95.3
39 TraesCS5A01G238300 chr2A 96.364 55 2 0 695 749 72521255 72521309 1.280000e-14 91.6
40 TraesCS5A01G238300 chr2A 96.364 55 2 0 695 749 723613959 723613905 1.280000e-14 91.6
41 TraesCS5A01G238300 chr1D 89.441 161 17 0 1232 1392 199624002 199624162 1.570000e-48 204.0
42 TraesCS5A01G238300 chr1D 82.308 130 21 2 1394 1522 199624249 199624377 9.800000e-21 111.0
43 TraesCS5A01G238300 chr1B 89.441 161 17 0 1232 1392 280182006 280182166 1.570000e-48 204.0
44 TraesCS5A01G238300 chr1B 92.381 105 7 1 3135 3238 681293960 681293856 7.470000e-32 148.0
45 TraesCS5A01G238300 chr1B 83.846 130 19 2 1394 1522 280182268 280182396 4.530000e-24 122.0
46 TraesCS5A01G238300 chr1B 97.778 45 1 0 3104 3148 653239092 653239136 9.940000e-11 78.7
47 TraesCS5A01G238300 chr1A 89.441 161 17 0 1232 1392 251376424 251376584 1.570000e-48 204.0
48 TraesCS5A01G238300 chr1A 98.148 54 1 0 696 749 30498801 30498854 9.870000e-16 95.3
49 TraesCS5A01G238300 chr3B 92.982 114 7 1 3139 3251 819011630 819011517 7.410000e-37 165.0
50 TraesCS5A01G238300 chr3B 98.246 57 1 0 693 749 821632108 821632052 2.120000e-17 100.0
51 TraesCS5A01G238300 chr3B 98.148 54 1 0 696 749 764783690 764783743 9.870000e-16 95.3
52 TraesCS5A01G238300 chr3A 79.435 248 37 12 1597 1837 359070681 359070441 2.670000e-36 163.0
53 TraesCS5A01G238300 chr3A 97.826 92 2 0 3148 3239 123651453 123651362 3.450000e-35 159.0
54 TraesCS5A01G238300 chr3A 96.774 93 3 0 3143 3235 438489034 438489126 4.460000e-34 156.0
55 TraesCS5A01G238300 chr3A 96.429 56 2 0 694 749 86576833 86576888 3.550000e-15 93.5
56 TraesCS5A01G238300 chr3A 94.915 59 2 1 691 749 247741809 247741752 1.280000e-14 91.6
57 TraesCS5A01G238300 chr3D 96.809 94 3 0 3139 3232 332232969 332232876 1.240000e-34 158.0
58 TraesCS5A01G238300 chr3D 94.949 99 4 1 3139 3236 475298818 475298916 1.600000e-33 154.0
59 TraesCS5A01G238300 chr3D 91.743 109 8 1 3145 3253 419904767 419904874 2.080000e-32 150.0
60 TraesCS5A01G238300 chr4A 93.939 99 4 2 3135 3233 422945097 422945193 7.470000e-32 148.0
61 TraesCS5A01G238300 chr4A 85.455 110 10 5 3234 3340 608222745 608222851 3.520000e-20 110.0
62 TraesCS5A01G238300 chr7B 89.535 86 9 0 3148 3233 22814062 22813977 3.520000e-20 110.0
63 TraesCS5A01G238300 chr7B 83.636 110 13 4 3233 3340 97638022 97637916 7.630000e-17 99.0
64 TraesCS5A01G238300 chr7B 96.226 53 2 0 3096 3148 98978946 98978998 1.650000e-13 87.9
65 TraesCS5A01G238300 chr4B 85.437 103 13 2 3126 3228 468006752 468006652 4.560000e-19 106.0
66 TraesCS5A01G238300 chr4B 79.259 135 20 6 1242 1372 6958271 6958141 1.650000e-13 87.9
67 TraesCS5A01G238300 chr7A 94.444 54 1 2 3096 3148 427555792 427555844 7.680000e-12 82.4
68 TraesCS5A01G238300 chr4D 95.745 47 2 0 3104 3150 320043377 320043331 3.570000e-10 76.8
69 TraesCS5A01G238300 chrUn 95.238 42 2 0 3106 3147 100636591 100636632 2.150000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G238300 chr5A 454718980 454722319 3339 False 2146.000000 6168 89.115333 1 3340 3 chr5A.!!$F2 3339
1 TraesCS5A01G238300 chr5B 417874153 417875931 1778 False 1197.500000 2239 88.733000 796 2609 2 chr5B.!!$F2 1813
2 TraesCS5A01G238300 chr5D 353760316 353764646 4330 False 1213.666667 2111 89.604333 43 3095 3 chr5D.!!$F1 3052
3 TraesCS5A01G238300 chr6A 604295184 604296131 947 False 353.000000 353 74.301000 1392 2313 1 chr6A.!!$F2 921
4 TraesCS5A01G238300 chr6A 604384997 604385941 944 False 348.000000 348 74.220000 1392 2310 1 chr6A.!!$F3 918
5 TraesCS5A01G238300 chr6D 457471969 457472696 727 True 339.000000 339 75.745000 1601 2313 1 chr6D.!!$R2 712
6 TraesCS5A01G238300 chr6B 695937608 695938332 724 False 333.000000 333 75.679000 1601 2310 1 chr6B.!!$F4 709

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
696 736 0.032912 ATGGTGCAGCATCCCATTCA 60.033 50.0 25.20 0.0 35.43 2.57 F
722 762 0.040246 GACTCGCGGACTATGCCTAC 60.040 60.0 6.13 0.0 0.00 3.18 F
794 834 0.179067 ACCAGCGAGTTCCGAACAAA 60.179 50.0 13.69 0.0 41.76 2.83 F
1015 2535 0.179129 CAAGATGGCCAACGCATTCC 60.179 55.0 10.96 0.0 36.38 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1557 3150 0.033781 TTGCAATTTGAGGCAGGTGC 59.966 50.0 0.0 0.0 41.68 5.01 R
2200 3836 0.034896 GAAGTTGTCCCAGAAGGCGA 59.965 55.0 0.0 0.0 34.51 5.54 R
2291 3927 0.107459 GGATGGTGGAGAGGTTGAGC 60.107 60.0 0.0 0.0 0.00 4.26 R
2830 4473 0.179174 CAAAACCGCAACGATAGCCC 60.179 55.0 0.0 0.0 42.67 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.862877 TCCATGGATGATTCACCGATT 57.137 42.857 11.44 0.00 0.00 3.34
21 22 4.169059 TCCATGGATGATTCACCGATTT 57.831 40.909 11.44 0.00 0.00 2.17
22 23 3.884693 TCCATGGATGATTCACCGATTTG 59.115 43.478 11.44 0.00 0.00 2.32
23 24 3.633525 CCATGGATGATTCACCGATTTGT 59.366 43.478 5.56 0.00 0.00 2.83
24 25 4.098349 CCATGGATGATTCACCGATTTGTT 59.902 41.667 5.56 0.00 0.00 2.83
25 26 4.963276 TGGATGATTCACCGATTTGTTC 57.037 40.909 0.00 0.00 0.00 3.18
35 36 2.442084 GATTTGTTCGAGTCGGCGT 58.558 52.632 13.54 0.00 0.00 5.68
36 37 0.788391 GATTTGTTCGAGTCGGCGTT 59.212 50.000 13.54 0.00 0.00 4.84
37 38 0.788391 ATTTGTTCGAGTCGGCGTTC 59.212 50.000 13.54 5.41 0.00 3.95
38 39 1.542272 TTTGTTCGAGTCGGCGTTCG 61.542 55.000 23.16 23.16 40.90 3.95
39 40 3.170585 GTTCGAGTCGGCGTTCGG 61.171 66.667 26.40 14.19 39.77 4.30
40 41 4.409218 TTCGAGTCGGCGTTCGGG 62.409 66.667 26.40 11.83 39.77 5.14
68 69 4.099380 CATGTGTGCATGCAGTTATTCA 57.901 40.909 23.41 11.75 44.87 2.57
85 86 3.870723 TTCACCGATTTGTTTGAGTCG 57.129 42.857 0.00 0.00 0.00 4.18
89 90 0.168128 CGATTTGTTTGAGTCGGGGC 59.832 55.000 0.00 0.00 0.00 5.80
91 92 1.468914 GATTTGTTTGAGTCGGGGCTC 59.531 52.381 0.00 0.00 36.12 4.70
93 94 1.415672 TTGTTTGAGTCGGGGCTCCT 61.416 55.000 0.00 0.00 34.74 3.69
104 105 3.886505 GTCGGGGCTCCTATCTATCTATG 59.113 52.174 0.00 0.00 0.00 2.23
111 112 5.245075 GGCTCCTATCTATCTATGGTATGCC 59.755 48.000 0.00 0.00 0.00 4.40
225 226 2.093235 GCAAGGACAGCTTCTCCTGTAT 60.093 50.000 10.05 0.00 45.55 2.29
256 257 3.356290 CCTGCAATTACACCTAGCCTTT 58.644 45.455 0.00 0.00 0.00 3.11
265 266 1.053424 ACCTAGCCTTTCGACCACAA 58.947 50.000 0.00 0.00 0.00 3.33
290 291 6.252967 TCAACATGCACAAAAGTGTATAGG 57.747 37.500 0.00 0.00 35.72 2.57
300 301 5.407387 ACAAAAGTGTATAGGTAGCAACACG 59.593 40.000 15.16 7.46 45.34 4.49
330 331 3.259876 TGTACGTACATCTGCCTTTCCTT 59.740 43.478 24.10 0.00 0.00 3.36
342 343 6.231211 TCTGCCTTTCCTTACTCTTTTACTG 58.769 40.000 0.00 0.00 0.00 2.74
383 384 5.362430 GGTGGAAATGGAGCAAATGGTAATA 59.638 40.000 0.00 0.00 0.00 0.98
410 411 1.261619 GTCGTGTGCCAGTTTCAAGAG 59.738 52.381 0.00 0.00 0.00 2.85
439 440 0.244994 ACGAGATATGATGCGGCCTC 59.755 55.000 0.00 0.00 0.00 4.70
441 442 0.610174 GAGATATGATGCGGCCTCCA 59.390 55.000 0.00 0.00 0.00 3.86
503 522 2.534939 GCGTGTATCAATCACAAGTCGC 60.535 50.000 0.00 0.00 35.79 5.19
508 527 3.041351 AATCACAAGTCGCGCGCA 61.041 55.556 32.61 15.73 0.00 6.09
521 540 0.452287 GCGCGCATCATGCATAGAAG 60.452 55.000 29.10 0.00 45.36 2.85
531 550 6.427974 CATCATGCATAGAAGTGTCATTCAC 58.572 40.000 0.00 0.00 46.46 3.18
551 591 1.351017 CTTCAGTTTCCCCTGGCACTA 59.649 52.381 0.00 0.00 33.14 2.74
556 596 2.772515 AGTTTCCCCTGGCACTAGATAC 59.227 50.000 0.00 0.00 0.00 2.24
560 600 1.414181 CCCCTGGCACTAGATACTGTG 59.586 57.143 0.00 0.00 37.26 3.66
572 612 5.654209 ACTAGATACTGTGCTGAGAATGACA 59.346 40.000 0.00 0.00 0.00 3.58
573 613 5.008619 AGATACTGTGCTGAGAATGACAG 57.991 43.478 0.00 0.00 41.37 3.51
581 621 0.174389 TGAGAATGACAGGAGCGAGC 59.826 55.000 0.00 0.00 0.00 5.03
593 633 1.355066 GAGCGAGCTCCGAACAAAGG 61.355 60.000 13.73 0.00 41.76 3.11
619 659 2.151202 GTCGCCTCAATGGAGTTTTGA 58.849 47.619 0.00 0.00 39.64 2.69
639 679 3.007506 TGAGGTCATTGTCAACATACGGT 59.992 43.478 0.00 0.00 0.00 4.83
645 685 6.378582 GTCATTGTCAACATACGGTTTTCAT 58.621 36.000 0.00 0.00 37.72 2.57
659 699 9.772973 ATACGGTTTTCATTAGCTAACATCATA 57.227 29.630 8.70 0.00 0.00 2.15
669 709 7.969536 TTAGCTAACATCATAATCAGAAGGC 57.030 36.000 0.86 0.00 0.00 4.35
694 734 1.682451 GCATGGTGCAGCATCCCATT 61.682 55.000 27.77 4.89 44.26 3.16
695 735 0.387929 CATGGTGCAGCATCCCATTC 59.612 55.000 27.77 0.00 36.85 2.67
696 736 0.032912 ATGGTGCAGCATCCCATTCA 60.033 50.000 25.20 0.00 35.43 2.57
697 737 0.966875 TGGTGCAGCATCCCATTCAC 60.967 55.000 15.99 0.00 0.00 3.18
698 738 0.682209 GGTGCAGCATCCCATTCACT 60.682 55.000 11.86 0.00 0.00 3.41
700 740 1.672881 GTGCAGCATCCCATTCACTAC 59.327 52.381 0.00 0.00 0.00 2.73
701 741 1.312815 GCAGCATCCCATTCACTACC 58.687 55.000 0.00 0.00 0.00 3.18
702 742 1.586422 CAGCATCCCATTCACTACCG 58.414 55.000 0.00 0.00 0.00 4.02
703 743 0.469917 AGCATCCCATTCACTACCGG 59.530 55.000 0.00 0.00 0.00 5.28
704 744 0.468226 GCATCCCATTCACTACCGGA 59.532 55.000 9.46 0.00 0.00 5.14
705 745 1.810412 GCATCCCATTCACTACCGGAC 60.810 57.143 9.46 0.00 0.00 4.79
706 746 1.762957 CATCCCATTCACTACCGGACT 59.237 52.381 9.46 0.00 0.00 3.85
707 747 1.481871 TCCCATTCACTACCGGACTC 58.518 55.000 9.46 0.00 0.00 3.36
708 748 0.102481 CCCATTCACTACCGGACTCG 59.898 60.000 9.46 0.00 0.00 4.18
709 749 0.527817 CCATTCACTACCGGACTCGC 60.528 60.000 9.46 0.00 34.56 5.03
710 750 0.866061 CATTCACTACCGGACTCGCG 60.866 60.000 9.46 0.00 34.56 5.87
711 751 2.001361 ATTCACTACCGGACTCGCGG 62.001 60.000 9.46 0.00 34.56 6.46
712 752 3.129502 CACTACCGGACTCGCGGA 61.130 66.667 9.46 0.00 34.56 5.54
713 753 3.130160 ACTACCGGACTCGCGGAC 61.130 66.667 9.46 0.00 34.56 4.79
714 754 2.823147 CTACCGGACTCGCGGACT 60.823 66.667 9.46 0.00 34.56 3.85
715 755 1.522355 CTACCGGACTCGCGGACTA 60.522 63.158 9.46 0.00 34.56 2.59
716 756 0.883814 CTACCGGACTCGCGGACTAT 60.884 60.000 9.46 0.00 34.56 2.12
717 757 1.162181 TACCGGACTCGCGGACTATG 61.162 60.000 9.46 0.00 34.56 2.23
718 758 2.353607 CGGACTCGCGGACTATGC 60.354 66.667 6.13 0.00 0.00 3.14
719 759 2.027751 GGACTCGCGGACTATGCC 59.972 66.667 6.13 0.00 0.00 4.40
720 760 2.491022 GGACTCGCGGACTATGCCT 61.491 63.158 6.13 0.00 0.00 4.75
721 761 1.170919 GGACTCGCGGACTATGCCTA 61.171 60.000 6.13 0.00 0.00 3.93
722 762 0.040246 GACTCGCGGACTATGCCTAC 60.040 60.000 6.13 0.00 0.00 3.18
723 763 1.082038 CTCGCGGACTATGCCTACG 60.082 63.158 6.13 0.00 0.00 3.51
724 764 2.050351 CGCGGACTATGCCTACGG 60.050 66.667 0.00 0.00 0.00 4.02
749 789 2.417516 CCGTCGGCATAGGTCCTG 59.582 66.667 0.00 0.00 0.00 3.86
750 790 2.125326 CCGTCGGCATAGGTCCTGA 61.125 63.158 0.00 0.00 0.00 3.86
751 791 1.360551 CGTCGGCATAGGTCCTGAG 59.639 63.158 0.00 0.00 0.00 3.35
752 792 1.101635 CGTCGGCATAGGTCCTGAGA 61.102 60.000 0.00 0.00 0.00 3.27
753 793 0.671251 GTCGGCATAGGTCCTGAGAG 59.329 60.000 0.00 0.00 0.00 3.20
754 794 0.259065 TCGGCATAGGTCCTGAGAGT 59.741 55.000 0.00 0.00 0.00 3.24
755 795 0.387202 CGGCATAGGTCCTGAGAGTG 59.613 60.000 0.00 0.00 0.00 3.51
756 796 1.781786 GGCATAGGTCCTGAGAGTGA 58.218 55.000 0.00 0.00 0.00 3.41
757 797 2.324541 GGCATAGGTCCTGAGAGTGAT 58.675 52.381 0.00 0.00 0.00 3.06
758 798 3.501349 GGCATAGGTCCTGAGAGTGATA 58.499 50.000 0.00 0.00 0.00 2.15
759 799 3.257127 GGCATAGGTCCTGAGAGTGATAC 59.743 52.174 0.00 0.00 0.00 2.24
760 800 4.148838 GCATAGGTCCTGAGAGTGATACT 58.851 47.826 0.00 0.00 0.00 2.12
761 801 4.022416 GCATAGGTCCTGAGAGTGATACTG 60.022 50.000 0.00 0.00 0.00 2.74
762 802 3.748645 AGGTCCTGAGAGTGATACTGT 57.251 47.619 0.00 0.00 0.00 3.55
763 803 3.360867 AGGTCCTGAGAGTGATACTGTG 58.639 50.000 0.00 0.00 0.00 3.66
764 804 2.159170 GGTCCTGAGAGTGATACTGTGC 60.159 54.545 0.00 0.00 0.00 4.57
765 805 2.757868 GTCCTGAGAGTGATACTGTGCT 59.242 50.000 0.00 0.00 0.00 4.40
766 806 2.757314 TCCTGAGAGTGATACTGTGCTG 59.243 50.000 0.00 0.00 0.00 4.41
767 807 2.757314 CCTGAGAGTGATACTGTGCTGA 59.243 50.000 0.00 0.00 0.00 4.26
768 808 3.181488 CCTGAGAGTGATACTGTGCTGAG 60.181 52.174 0.00 0.00 0.00 3.35
769 809 3.690460 TGAGAGTGATACTGTGCTGAGA 58.310 45.455 0.00 0.00 0.00 3.27
770 810 3.693578 TGAGAGTGATACTGTGCTGAGAG 59.306 47.826 0.00 0.00 0.00 3.20
771 811 3.694072 GAGAGTGATACTGTGCTGAGAGT 59.306 47.826 0.00 0.00 0.00 3.24
772 812 3.443329 AGAGTGATACTGTGCTGAGAGTG 59.557 47.826 0.00 0.00 0.00 3.51
773 813 3.425659 AGTGATACTGTGCTGAGAGTGA 58.574 45.455 0.00 0.00 0.00 3.41
774 814 4.022603 AGTGATACTGTGCTGAGAGTGAT 58.977 43.478 0.00 0.00 0.00 3.06
775 815 5.196695 AGTGATACTGTGCTGAGAGTGATA 58.803 41.667 0.00 0.00 0.00 2.15
776 816 5.067153 AGTGATACTGTGCTGAGAGTGATAC 59.933 44.000 0.00 0.00 0.00 2.24
777 817 4.339530 TGATACTGTGCTGAGAGTGATACC 59.660 45.833 0.00 0.00 0.00 2.73
778 818 2.529632 ACTGTGCTGAGAGTGATACCA 58.470 47.619 0.00 0.00 0.00 3.25
779 819 2.495270 ACTGTGCTGAGAGTGATACCAG 59.505 50.000 0.00 0.00 0.00 4.00
781 821 3.264666 GCTGAGAGTGATACCAGCG 57.735 57.895 0.00 0.00 41.86 5.18
782 822 0.741326 GCTGAGAGTGATACCAGCGA 59.259 55.000 0.00 0.00 41.86 4.93
783 823 1.268999 GCTGAGAGTGATACCAGCGAG 60.269 57.143 0.00 0.00 41.86 5.03
784 824 2.020720 CTGAGAGTGATACCAGCGAGT 58.979 52.381 0.00 0.00 0.00 4.18
785 825 2.425312 CTGAGAGTGATACCAGCGAGTT 59.575 50.000 0.00 0.00 0.00 3.01
786 826 2.423892 TGAGAGTGATACCAGCGAGTTC 59.576 50.000 0.00 0.00 0.00 3.01
787 827 1.751924 AGAGTGATACCAGCGAGTTCC 59.248 52.381 0.00 0.00 0.00 3.62
788 828 0.456221 AGTGATACCAGCGAGTTCCG 59.544 55.000 0.00 0.00 42.21 4.30
789 829 0.454600 GTGATACCAGCGAGTTCCGA 59.545 55.000 0.00 0.00 41.76 4.55
790 830 1.135199 GTGATACCAGCGAGTTCCGAA 60.135 52.381 0.00 0.00 41.76 4.30
791 831 1.135199 TGATACCAGCGAGTTCCGAAC 60.135 52.381 2.81 2.81 41.76 3.95
792 832 0.892755 ATACCAGCGAGTTCCGAACA 59.107 50.000 13.69 0.00 41.76 3.18
793 833 0.675083 TACCAGCGAGTTCCGAACAA 59.325 50.000 13.69 0.00 41.76 2.83
794 834 0.179067 ACCAGCGAGTTCCGAACAAA 60.179 50.000 13.69 0.00 41.76 2.83
803 843 3.551846 AGTTCCGAACAAAGGTCATTGT 58.448 40.909 13.69 0.00 45.12 2.71
818 858 3.344904 CATTGTCGCCTCAATGGAATC 57.655 47.619 16.11 0.00 46.08 2.52
872 912 3.688185 GCTCACATCAGAATCAGAAGCAA 59.312 43.478 0.00 0.00 0.00 3.91
903 944 2.560105 CTGCACGATCCCATCTCAGATA 59.440 50.000 0.00 0.00 0.00 1.98
905 946 3.056322 TGCACGATCCCATCTCAGATATG 60.056 47.826 0.00 0.00 0.00 1.78
906 947 3.194329 GCACGATCCCATCTCAGATATGA 59.806 47.826 0.00 0.00 0.00 2.15
907 948 4.677514 GCACGATCCCATCTCAGATATGAG 60.678 50.000 11.23 11.23 37.28 2.90
927 968 4.038042 TGAGTATAGCCTTCTCGTGGATTG 59.962 45.833 0.00 0.00 0.00 2.67
950 2470 9.760077 ATTGTACTATGGTAAACCGAAAGATAG 57.240 33.333 0.00 0.00 39.43 2.08
997 2517 6.463995 AAAAGTTGCCATGAAAACTACTCA 57.536 33.333 11.84 0.00 35.60 3.41
998 2518 6.463995 AAAGTTGCCATGAAAACTACTCAA 57.536 33.333 11.84 0.00 35.60 3.02
999 2519 5.695851 AGTTGCCATGAAAACTACTCAAG 57.304 39.130 10.27 0.00 34.90 3.02
1000 2520 5.376625 AGTTGCCATGAAAACTACTCAAGA 58.623 37.500 10.27 0.00 34.90 3.02
1002 2522 5.885230 TGCCATGAAAACTACTCAAGATG 57.115 39.130 0.00 0.00 0.00 2.90
1004 2524 4.439289 GCCATGAAAACTACTCAAGATGGC 60.439 45.833 0.00 0.00 41.03 4.40
1005 2525 4.096984 CCATGAAAACTACTCAAGATGGCC 59.903 45.833 0.00 0.00 0.00 5.36
1007 2527 4.724399 TGAAAACTACTCAAGATGGCCAA 58.276 39.130 10.96 0.00 0.00 4.52
1008 2528 4.518970 TGAAAACTACTCAAGATGGCCAAC 59.481 41.667 10.96 7.42 0.00 3.77
1011 2531 0.323302 TACTCAAGATGGCCAACGCA 59.677 50.000 10.96 0.00 36.38 5.24
1012 2532 0.322816 ACTCAAGATGGCCAACGCAT 60.323 50.000 10.96 0.00 36.38 4.73
1014 2534 0.810648 TCAAGATGGCCAACGCATTC 59.189 50.000 10.96 0.30 36.38 2.67
1015 2535 0.179129 CAAGATGGCCAACGCATTCC 60.179 55.000 10.96 0.00 36.38 3.01
1016 2536 0.611618 AAGATGGCCAACGCATTCCA 60.612 50.000 10.96 0.00 36.38 3.53
1017 2537 0.396139 AGATGGCCAACGCATTCCAT 60.396 50.000 10.96 0.00 41.63 3.41
1138 2668 1.376037 AGCGACCAAGCCAAGCTAC 60.376 57.895 0.00 0.00 38.25 3.58
1151 2692 2.086869 CAAGCTACACAAGGACATGGG 58.913 52.381 0.00 0.00 0.00 4.00
1194 2738 3.580193 GCAGCAGCCATGGTAGCG 61.580 66.667 20.11 16.51 34.74 4.26
1380 2924 3.239253 AACGGCCTCAACGTCCCT 61.239 61.111 0.00 0.00 44.83 4.20
1529 3122 3.077359 GCATCCAGTTTGTAAGCTCAGT 58.923 45.455 0.00 0.00 0.00 3.41
1530 3123 3.126000 GCATCCAGTTTGTAAGCTCAGTC 59.874 47.826 0.00 0.00 0.00 3.51
1532 3125 3.995199 TCCAGTTTGTAAGCTCAGTCAG 58.005 45.455 0.00 0.00 0.00 3.51
1548 3141 3.064271 CAGTCAGCTACTTCGTACCTCTC 59.936 52.174 0.00 0.00 35.76 3.20
1551 3144 2.614983 CAGCTACTTCGTACCTCTCCTC 59.385 54.545 0.00 0.00 0.00 3.71
1552 3145 2.506644 AGCTACTTCGTACCTCTCCTCT 59.493 50.000 0.00 0.00 0.00 3.69
1554 3147 3.065648 GCTACTTCGTACCTCTCCTCTTG 59.934 52.174 0.00 0.00 0.00 3.02
1555 3148 3.157750 ACTTCGTACCTCTCCTCTTGT 57.842 47.619 0.00 0.00 0.00 3.16
1556 3149 4.298103 ACTTCGTACCTCTCCTCTTGTA 57.702 45.455 0.00 0.00 0.00 2.41
1557 3150 4.263435 ACTTCGTACCTCTCCTCTTGTAG 58.737 47.826 0.00 0.00 0.00 2.74
1558 3151 2.641305 TCGTACCTCTCCTCTTGTAGC 58.359 52.381 0.00 0.00 0.00 3.58
1561 3154 1.562783 ACCTCTCCTCTTGTAGCACC 58.437 55.000 0.00 0.00 0.00 5.01
1597 3190 1.011574 ACAAGCAACGAACGAACGC 60.012 52.632 0.14 0.64 36.70 4.84
1598 3191 2.061495 CAAGCAACGAACGAACGCG 61.061 57.895 3.53 3.53 44.79 6.01
2021 3642 2.027625 GACCAAGGACCTCAACGCG 61.028 63.158 3.53 3.53 0.00 6.01
2291 3927 2.202878 CCGGACTACATGCACCCG 60.203 66.667 0.00 8.79 39.85 5.28
2342 3978 1.008538 CGCCGCAAAGCCATAATCC 60.009 57.895 0.00 0.00 0.00 3.01
2343 3979 1.723608 CGCCGCAAAGCCATAATCCA 61.724 55.000 0.00 0.00 0.00 3.41
2344 3980 0.249031 GCCGCAAAGCCATAATCCAC 60.249 55.000 0.00 0.00 0.00 4.02
2357 3993 5.560724 CCATAATCCACCATTACCCTACTG 58.439 45.833 0.00 0.00 29.24 2.74
2363 4005 4.600111 TCCACCATTACCCTACTGTTTTCT 59.400 41.667 0.00 0.00 0.00 2.52
2370 4012 8.145122 CCATTACCCTACTGTTTTCTCTATCTC 58.855 40.741 0.00 0.00 0.00 2.75
2372 4014 6.532988 ACCCTACTGTTTTCTCTATCTCAC 57.467 41.667 0.00 0.00 0.00 3.51
2417 4060 3.301771 GCATCCGTGCGCAATAAAAATTC 60.302 43.478 14.00 0.00 42.28 2.17
2418 4061 3.840890 TCCGTGCGCAATAAAAATTCT 57.159 38.095 14.00 0.00 0.00 2.40
2419 4062 3.753842 TCCGTGCGCAATAAAAATTCTC 58.246 40.909 14.00 0.00 0.00 2.87
2420 4063 3.438781 TCCGTGCGCAATAAAAATTCTCT 59.561 39.130 14.00 0.00 0.00 3.10
2421 4064 3.543494 CCGTGCGCAATAAAAATTCTCTG 59.457 43.478 14.00 0.00 0.00 3.35
2422 4065 3.001758 CGTGCGCAATAAAAATTCTCTGC 60.002 43.478 14.00 0.00 0.00 4.26
2425 4068 4.726975 CGCAATAAAAATTCTCTGCGTG 57.273 40.909 6.12 0.00 45.52 5.34
2426 4069 4.402583 CGCAATAAAAATTCTCTGCGTGA 58.597 39.130 6.12 0.00 45.52 4.35
2427 4070 5.030295 CGCAATAAAAATTCTCTGCGTGAT 58.970 37.500 6.12 0.00 45.52 3.06
2428 4071 5.512788 CGCAATAAAAATTCTCTGCGTGATT 59.487 36.000 6.12 0.00 45.52 2.57
2429 4072 6.033831 CGCAATAAAAATTCTCTGCGTGATTT 59.966 34.615 6.12 0.00 45.52 2.17
2430 4073 7.410728 CGCAATAAAAATTCTCTGCGTGATTTT 60.411 33.333 6.12 0.00 45.52 1.82
2431 4074 8.223100 GCAATAAAAATTCTCTGCGTGATTTTT 58.777 29.630 9.64 9.64 35.94 1.94
2441 4084 9.935682 TTCTCTGCGTGATTTTTATTTATCATC 57.064 29.630 0.00 0.00 33.69 2.92
2442 4085 8.559536 TCTCTGCGTGATTTTTATTTATCATCC 58.440 33.333 0.00 0.00 33.69 3.51
2443 4086 8.450578 TCTGCGTGATTTTTATTTATCATCCT 57.549 30.769 0.00 0.00 33.69 3.24
2444 4087 8.559536 TCTGCGTGATTTTTATTTATCATCCTC 58.440 33.333 0.00 0.00 33.69 3.71
2445 4088 8.450578 TGCGTGATTTTTATTTATCATCCTCT 57.549 30.769 0.00 0.00 33.69 3.69
2446 4089 8.344831 TGCGTGATTTTTATTTATCATCCTCTG 58.655 33.333 0.00 0.00 33.69 3.35
2447 4090 7.324616 GCGTGATTTTTATTTATCATCCTCTGC 59.675 37.037 0.00 0.00 33.69 4.26
2448 4091 7.805071 CGTGATTTTTATTTATCATCCTCTGCC 59.195 37.037 0.00 0.00 33.69 4.85
2449 4092 8.632679 GTGATTTTTATTTATCATCCTCTGCCA 58.367 33.333 0.00 0.00 33.69 4.92
2450 4093 9.370930 TGATTTTTATTTATCATCCTCTGCCAT 57.629 29.630 0.00 0.00 0.00 4.40
2451 4094 9.635520 GATTTTTATTTATCATCCTCTGCCATG 57.364 33.333 0.00 0.00 0.00 3.66
2452 4095 8.537728 TTTTTATTTATCATCCTCTGCCATGT 57.462 30.769 0.00 0.00 0.00 3.21
2453 4096 7.750229 TTTATTTATCATCCTCTGCCATGTC 57.250 36.000 0.00 0.00 0.00 3.06
2454 4097 5.579753 ATTTATCATCCTCTGCCATGTCT 57.420 39.130 0.00 0.00 0.00 3.41
2466 4109 2.630098 TGCCATGTCTAGCAGAGTATCC 59.370 50.000 0.00 0.00 33.66 2.59
2483 4126 5.131784 AGTATCCGTCCTCTTAATTCGACT 58.868 41.667 0.00 0.00 0.00 4.18
2489 4132 5.163683 CCGTCCTCTTAATTCGACTGAGTAA 60.164 44.000 0.00 0.00 0.00 2.24
2542 4185 5.957842 TTTTTGTTTATCATCCTCTGCGT 57.042 34.783 0.00 0.00 0.00 5.24
2551 4194 8.345565 GTTTATCATCCTCTGCGTGATTTTATT 58.654 33.333 0.00 0.00 34.62 1.40
2553 4196 6.757897 TCATCCTCTGCGTGATTTTATTTT 57.242 33.333 0.00 0.00 0.00 1.82
2555 4198 7.693952 TCATCCTCTGCGTGATTTTATTTTAC 58.306 34.615 0.00 0.00 0.00 2.01
2556 4199 7.335673 TCATCCTCTGCGTGATTTTATTTTACA 59.664 33.333 0.00 0.00 0.00 2.41
2557 4200 7.624360 TCCTCTGCGTGATTTTATTTTACAT 57.376 32.000 0.00 0.00 0.00 2.29
2558 4201 7.693952 TCCTCTGCGTGATTTTATTTTACATC 58.306 34.615 0.00 0.00 0.00 3.06
2559 4202 7.552687 TCCTCTGCGTGATTTTATTTTACATCT 59.447 33.333 0.00 0.00 0.00 2.90
2560 4203 8.184192 CCTCTGCGTGATTTTATTTTACATCTT 58.816 33.333 0.00 0.00 0.00 2.40
2561 4204 8.894409 TCTGCGTGATTTTATTTTACATCTTG 57.106 30.769 0.00 0.00 0.00 3.02
2562 4205 7.967854 TCTGCGTGATTTTATTTTACATCTTGG 59.032 33.333 0.00 0.00 0.00 3.61
2620 4263 7.605691 CAGTCACTGGATATAAGAAATGATCCC 59.394 40.741 0.00 0.00 37.63 3.85
2674 4317 6.791867 ATACCACTCTGTTCTGTAGCAATA 57.208 37.500 0.00 0.00 0.00 1.90
2683 4326 5.720202 TGTTCTGTAGCAATACCAGTACAG 58.280 41.667 0.00 2.56 42.48 2.74
2684 4327 5.245301 TGTTCTGTAGCAATACCAGTACAGT 59.755 40.000 7.92 0.00 42.00 3.55
2685 4328 6.434965 TGTTCTGTAGCAATACCAGTACAGTA 59.565 38.462 7.92 0.00 42.00 2.74
2686 4329 6.446781 TCTGTAGCAATACCAGTACAGTAC 57.553 41.667 2.05 2.05 42.00 2.73
2687 4330 5.947566 TCTGTAGCAATACCAGTACAGTACA 59.052 40.000 13.37 0.00 42.00 2.90
2688 4331 6.095021 TCTGTAGCAATACCAGTACAGTACAG 59.905 42.308 13.37 4.81 42.00 2.74
2698 4341 3.827302 CAGTACAGTACAGGAACCACTCT 59.173 47.826 13.37 0.00 0.00 3.24
2716 4359 6.042777 CCACTCTCGCAATTATAAGAAGTGA 58.957 40.000 0.00 6.85 0.00 3.41
2719 4362 6.926272 ACTCTCGCAATTATAAGAAGTGATCC 59.074 38.462 0.00 0.00 0.00 3.36
2757 4400 5.620206 ACTCAAGTGTAATCCATGACACAA 58.380 37.500 15.42 2.91 46.83 3.33
2775 4418 9.932207 ATGACACAATGATCATACAAACAAAAT 57.068 25.926 9.04 0.00 33.73 1.82
2789 4432 7.220599 ACAAACAAAATCATTTCAAGACACG 57.779 32.000 0.00 0.00 0.00 4.49
2809 4452 2.495669 CGGGGTAATCAATGTGGCTTTT 59.504 45.455 0.00 0.00 0.00 2.27
2818 4461 3.568007 TCAATGTGGCTTTTAGTGTCCAC 59.432 43.478 3.49 3.49 46.78 4.02
2846 4489 2.124860 GGGGCTATCGTTGCGGTT 60.125 61.111 0.00 0.00 0.00 4.44
2872 4515 3.144506 CTCCCATGTTGTAGATCATGCC 58.855 50.000 5.58 0.00 39.74 4.40
2935 4578 4.273318 ACTGGAGTAGGAATGAAAATGGC 58.727 43.478 0.00 0.00 0.00 4.40
2938 4581 4.137543 GGAGTAGGAATGAAAATGGCGAT 58.862 43.478 0.00 0.00 0.00 4.58
2963 4606 2.310538 CTTTCAGCTTTTCTGGTGGGT 58.689 47.619 0.00 0.00 43.06 4.51
2980 4623 1.066358 GGGTAACAGAAACGGAGAGGG 60.066 57.143 0.00 0.00 39.74 4.30
2991 4634 5.596772 AGAAACGGAGAGGGAAAATGAAAAA 59.403 36.000 0.00 0.00 0.00 1.94
2993 4636 4.725490 ACGGAGAGGGAAAATGAAAAAGA 58.275 39.130 0.00 0.00 0.00 2.52
2995 4638 5.009710 ACGGAGAGGGAAAATGAAAAAGAAC 59.990 40.000 0.00 0.00 0.00 3.01
2997 4640 6.450545 GGAGAGGGAAAATGAAAAAGAACAG 58.549 40.000 0.00 0.00 0.00 3.16
2999 4642 7.201911 GGAGAGGGAAAATGAAAAAGAACAGAA 60.202 37.037 0.00 0.00 0.00 3.02
3000 4643 8.078060 AGAGGGAAAATGAAAAAGAACAGAAA 57.922 30.769 0.00 0.00 0.00 2.52
3001 4644 8.708378 AGAGGGAAAATGAAAAAGAACAGAAAT 58.292 29.630 0.00 0.00 0.00 2.17
3002 4645 8.667076 AGGGAAAATGAAAAAGAACAGAAATG 57.333 30.769 0.00 0.00 0.00 2.32
3007 4650 9.889128 AAAATGAAAAAGAACAGAAATGGAAGA 57.111 25.926 0.00 0.00 0.00 2.87
3011 4654 7.506938 TGAAAAAGAACAGAAATGGAAGAGGAT 59.493 33.333 0.00 0.00 0.00 3.24
3041 4684 2.469886 GTGGAAATGAAACGGCGTTTTC 59.530 45.455 34.99 27.22 35.77 2.29
3045 4688 0.039527 ATGAAACGGCGTTTTCCAGC 60.040 50.000 34.99 23.15 35.77 4.85
3047 4690 2.108344 GAAACGGCGTTTTCCAGCGA 62.108 55.000 34.99 0.00 35.77 4.93
3049 4692 2.127383 CGGCGTTTTCCAGCGAAC 60.127 61.111 0.00 0.00 0.00 3.95
3050 4693 2.887889 CGGCGTTTTCCAGCGAACA 61.888 57.895 0.00 0.00 0.00 3.18
3052 4695 0.660300 GGCGTTTTCCAGCGAACAAG 60.660 55.000 0.00 0.00 0.00 3.16
3053 4696 1.268778 GCGTTTTCCAGCGAACAAGC 61.269 55.000 0.00 0.00 37.41 4.01
3055 4698 1.334960 CGTTTTCCAGCGAACAAGCAT 60.335 47.619 0.00 0.00 40.15 3.79
3056 4699 2.053627 GTTTTCCAGCGAACAAGCATG 58.946 47.619 0.00 0.00 40.15 4.06
3058 4701 0.250684 TTCCAGCGAACAAGCATGGA 60.251 50.000 0.00 6.21 40.23 3.41
3059 4702 0.250684 TCCAGCGAACAAGCATGGAA 60.251 50.000 0.00 0.00 39.58 3.53
3060 4703 0.597568 CCAGCGAACAAGCATGGAAA 59.402 50.000 0.00 0.00 37.50 3.13
3095 4738 6.392354 CACTTAAAATATGGGCATATGGCTG 58.608 40.000 26.45 10.20 44.01 4.85
3096 4739 5.481473 ACTTAAAATATGGGCATATGGCTGG 59.519 40.000 26.45 7.26 44.01 4.85
3097 4740 3.831642 AAATATGGGCATATGGCTGGA 57.168 42.857 26.45 13.31 44.01 3.86
3098 4741 2.814805 ATATGGGCATATGGCTGGAC 57.185 50.000 26.45 12.03 44.01 4.02
3099 4742 1.443852 TATGGGCATATGGCTGGACA 58.556 50.000 26.45 16.97 44.01 4.02
3100 4743 0.557238 ATGGGCATATGGCTGGACAA 59.443 50.000 26.45 8.16 44.01 3.18
3101 4744 0.106569 TGGGCATATGGCTGGACAAG 60.107 55.000 26.45 0.00 44.01 3.16
3120 4763 4.473520 CGATTCGGTGCCCAGGCT 62.474 66.667 10.58 0.00 42.51 4.58
3121 4764 2.514824 GATTCGGTGCCCAGGCTC 60.515 66.667 10.58 6.18 42.51 4.70
3122 4765 3.329542 GATTCGGTGCCCAGGCTCA 62.330 63.158 10.58 0.00 42.51 4.26
3123 4766 3.335356 ATTCGGTGCCCAGGCTCAG 62.335 63.158 10.58 7.38 42.51 3.35
3136 4779 4.827087 CTCAGCTGCACCCGCGAT 62.827 66.667 8.23 0.00 42.97 4.58
3139 4782 4.393155 AGCTGCACCCGCGATGAA 62.393 61.111 8.23 0.00 42.97 2.57
3140 4783 3.204827 GCTGCACCCGCGATGAAT 61.205 61.111 8.23 0.00 42.97 2.57
3141 4784 1.887242 GCTGCACCCGCGATGAATA 60.887 57.895 8.23 0.00 42.97 1.75
3142 4785 1.835483 GCTGCACCCGCGATGAATAG 61.835 60.000 8.23 6.51 42.97 1.73
3143 4786 0.249447 CTGCACCCGCGATGAATAGA 60.249 55.000 8.23 0.00 42.97 1.98
3144 4787 0.176910 TGCACCCGCGATGAATAGAA 59.823 50.000 8.23 0.00 42.97 2.10
3145 4788 1.295792 GCACCCGCGATGAATAGAAA 58.704 50.000 8.23 0.00 0.00 2.52
3146 4789 1.668751 GCACCCGCGATGAATAGAAAA 59.331 47.619 8.23 0.00 0.00 2.29
3147 4790 2.290641 GCACCCGCGATGAATAGAAAAT 59.709 45.455 8.23 0.00 0.00 1.82
3148 4791 3.496884 GCACCCGCGATGAATAGAAAATA 59.503 43.478 8.23 0.00 0.00 1.40
3149 4792 4.610680 GCACCCGCGATGAATAGAAAATAC 60.611 45.833 8.23 0.00 0.00 1.89
3150 4793 4.750098 CACCCGCGATGAATAGAAAATACT 59.250 41.667 8.23 0.00 0.00 2.12
3151 4794 4.989168 ACCCGCGATGAATAGAAAATACTC 59.011 41.667 8.23 0.00 0.00 2.59
3152 4795 4.389077 CCCGCGATGAATAGAAAATACTCC 59.611 45.833 8.23 0.00 0.00 3.85
3153 4796 4.389077 CCGCGATGAATAGAAAATACTCCC 59.611 45.833 8.23 0.00 0.00 4.30
3154 4797 5.230942 CGCGATGAATAGAAAATACTCCCT 58.769 41.667 0.00 0.00 0.00 4.20
3155 4798 5.346281 CGCGATGAATAGAAAATACTCCCTC 59.654 44.000 0.00 0.00 0.00 4.30
3156 4799 6.459923 GCGATGAATAGAAAATACTCCCTCT 58.540 40.000 0.00 0.00 0.00 3.69
3157 4800 6.367422 GCGATGAATAGAAAATACTCCCTCTG 59.633 42.308 0.00 0.00 0.00 3.35
3158 4801 7.437748 CGATGAATAGAAAATACTCCCTCTGT 58.562 38.462 0.00 0.00 0.00 3.41
3159 4802 8.577296 CGATGAATAGAAAATACTCCCTCTGTA 58.423 37.037 0.00 0.00 0.00 2.74
3162 4805 9.886132 TGAATAGAAAATACTCCCTCTGTAAAC 57.114 33.333 0.00 0.00 0.00 2.01
3174 4817 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
3175 4818 8.777578 TCCCTCTGTAAACTAATATAAGAGCA 57.222 34.615 0.00 0.00 0.00 4.26
3176 4819 9.381038 TCCCTCTGTAAACTAATATAAGAGCAT 57.619 33.333 0.00 0.00 0.00 3.79
3223 4866 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
3224 4867 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
3225 4868 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
3226 4869 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
3227 4870 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
3228 4871 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
3229 4872 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
3230 4873 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
3231 4874 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
3232 4875 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
3233 4876 8.995027 TTATATTAGTTTACGGAGGGAGTACA 57.005 34.615 0.00 0.00 0.00 2.90
3234 4877 7.902920 ATATTAGTTTACGGAGGGAGTACAA 57.097 36.000 0.00 0.00 0.00 2.41
3235 4878 6.610075 ATTAGTTTACGGAGGGAGTACAAA 57.390 37.500 0.00 0.00 0.00 2.83
3236 4879 4.961438 AGTTTACGGAGGGAGTACAAAA 57.039 40.909 0.00 0.00 0.00 2.44
3237 4880 4.635223 AGTTTACGGAGGGAGTACAAAAC 58.365 43.478 0.00 0.00 0.00 2.43
3238 4881 4.101430 AGTTTACGGAGGGAGTACAAAACA 59.899 41.667 0.00 0.00 0.00 2.83
3239 4882 4.686191 TTACGGAGGGAGTACAAAACAA 57.314 40.909 0.00 0.00 0.00 2.83
3240 4883 3.564053 ACGGAGGGAGTACAAAACAAA 57.436 42.857 0.00 0.00 0.00 2.83
3241 4884 4.094830 ACGGAGGGAGTACAAAACAAAT 57.905 40.909 0.00 0.00 0.00 2.32
3242 4885 5.231702 ACGGAGGGAGTACAAAACAAATA 57.768 39.130 0.00 0.00 0.00 1.40
3243 4886 4.999311 ACGGAGGGAGTACAAAACAAATAC 59.001 41.667 0.00 0.00 0.00 1.89
3244 4887 5.221783 ACGGAGGGAGTACAAAACAAATACT 60.222 40.000 0.00 0.00 31.79 2.12
3245 4888 6.014327 ACGGAGGGAGTACAAAACAAATACTA 60.014 38.462 0.00 0.00 29.25 1.82
3246 4889 6.534079 CGGAGGGAGTACAAAACAAATACTAG 59.466 42.308 0.00 0.00 29.25 2.57
3247 4890 7.578189 CGGAGGGAGTACAAAACAAATACTAGA 60.578 40.741 0.00 0.00 29.25 2.43
3248 4891 8.098912 GGAGGGAGTACAAAACAAATACTAGAA 58.901 37.037 0.00 0.00 29.25 2.10
3249 4892 9.498176 GAGGGAGTACAAAACAAATACTAGAAA 57.502 33.333 0.00 0.00 29.25 2.52
3250 4893 9.856162 AGGGAGTACAAAACAAATACTAGAAAA 57.144 29.630 0.00 0.00 29.25 2.29
3294 4937 5.999205 TTTGCATGGAAGATATTTGGTGT 57.001 34.783 0.00 0.00 0.00 4.16
3295 4938 4.987408 TGCATGGAAGATATTTGGTGTG 57.013 40.909 0.00 0.00 0.00 3.82
3296 4939 4.343231 TGCATGGAAGATATTTGGTGTGT 58.657 39.130 0.00 0.00 0.00 3.72
3297 4940 4.158209 TGCATGGAAGATATTTGGTGTGTG 59.842 41.667 0.00 0.00 0.00 3.82
3298 4941 4.398988 GCATGGAAGATATTTGGTGTGTGA 59.601 41.667 0.00 0.00 0.00 3.58
3299 4942 5.449588 GCATGGAAGATATTTGGTGTGTGAG 60.450 44.000 0.00 0.00 0.00 3.51
3300 4943 4.009675 TGGAAGATATTTGGTGTGTGAGC 58.990 43.478 0.00 0.00 0.00 4.26
3301 4944 4.263462 TGGAAGATATTTGGTGTGTGAGCT 60.263 41.667 0.00 0.00 0.00 4.09
3302 4945 4.095483 GGAAGATATTTGGTGTGTGAGCTG 59.905 45.833 0.00 0.00 0.00 4.24
3303 4946 3.012518 AGATATTTGGTGTGTGAGCTGC 58.987 45.455 0.00 0.00 0.00 5.25
3304 4947 1.155889 TATTTGGTGTGTGAGCTGCG 58.844 50.000 0.00 0.00 0.00 5.18
3305 4948 2.133742 ATTTGGTGTGTGAGCTGCGC 62.134 55.000 0.00 0.00 0.00 6.09
3306 4949 3.755526 TTGGTGTGTGAGCTGCGCT 62.756 57.895 9.73 2.68 43.88 5.92
3307 4950 2.974698 GGTGTGTGAGCTGCGCTT 60.975 61.111 9.73 0.00 39.88 4.68
3308 4951 2.553268 GTGTGTGAGCTGCGCTTC 59.447 61.111 9.73 4.47 39.88 3.86
3309 4952 2.108771 TGTGTGAGCTGCGCTTCA 59.891 55.556 9.73 7.37 39.88 3.02
3310 4953 1.523484 TGTGTGAGCTGCGCTTCAA 60.523 52.632 9.73 0.00 39.88 2.69
3311 4954 1.094650 TGTGTGAGCTGCGCTTCAAA 61.095 50.000 9.73 2.19 39.88 2.69
3312 4955 0.239347 GTGTGAGCTGCGCTTCAAAT 59.761 50.000 9.73 0.00 39.88 2.32
3313 4956 0.953727 TGTGAGCTGCGCTTCAAATT 59.046 45.000 9.73 0.00 39.88 1.82
3314 4957 1.337703 TGTGAGCTGCGCTTCAAATTT 59.662 42.857 9.73 0.00 39.88 1.82
3315 4958 1.981533 GTGAGCTGCGCTTCAAATTTC 59.018 47.619 9.73 0.00 39.88 2.17
3316 4959 1.608109 TGAGCTGCGCTTCAAATTTCA 59.392 42.857 9.73 0.00 39.88 2.69
3317 4960 2.248487 GAGCTGCGCTTCAAATTTCAG 58.752 47.619 9.73 0.00 39.88 3.02
3318 4961 1.881973 AGCTGCGCTTCAAATTTCAGA 59.118 42.857 9.73 0.00 33.89 3.27
3319 4962 2.490903 AGCTGCGCTTCAAATTTCAGAT 59.509 40.909 9.73 0.00 33.89 2.90
3320 4963 2.850647 GCTGCGCTTCAAATTTCAGATC 59.149 45.455 9.73 0.00 0.00 2.75
3321 4964 3.671433 GCTGCGCTTCAAATTTCAGATCA 60.671 43.478 9.73 0.00 0.00 2.92
3322 4965 4.669318 CTGCGCTTCAAATTTCAGATCAT 58.331 39.130 9.73 0.00 0.00 2.45
3323 4966 5.063180 TGCGCTTCAAATTTCAGATCATT 57.937 34.783 9.73 0.00 0.00 2.57
3324 4967 5.472148 TGCGCTTCAAATTTCAGATCATTT 58.528 33.333 9.73 0.00 0.00 2.32
3325 4968 5.346551 TGCGCTTCAAATTTCAGATCATTTG 59.653 36.000 9.73 9.04 40.39 2.32
3326 4969 5.220340 GCGCTTCAAATTTCAGATCATTTGG 60.220 40.000 13.37 3.62 39.76 3.28
3327 4970 6.094719 CGCTTCAAATTTCAGATCATTTGGA 58.905 36.000 13.37 6.69 39.76 3.53
3328 4971 6.034256 CGCTTCAAATTTCAGATCATTTGGAC 59.966 38.462 13.37 5.70 39.76 4.02
3329 4972 6.869913 GCTTCAAATTTCAGATCATTTGGACA 59.130 34.615 13.37 2.20 39.76 4.02
3330 4973 7.548075 GCTTCAAATTTCAGATCATTTGGACAT 59.452 33.333 13.37 0.00 39.76 3.06
3331 4974 8.991243 TTCAAATTTCAGATCATTTGGACATC 57.009 30.769 13.37 0.00 39.76 3.06
3332 4975 8.357290 TCAAATTTCAGATCATTTGGACATCT 57.643 30.769 13.37 0.00 39.76 2.90
3333 4976 8.248253 TCAAATTTCAGATCATTTGGACATCTG 58.752 33.333 13.37 2.32 43.38 2.90
3336 4979 5.688814 TCAGATCATTTGGACATCTGAGT 57.311 39.130 6.73 0.00 44.92 3.41
3337 4980 6.796785 TCAGATCATTTGGACATCTGAGTA 57.203 37.500 6.73 0.00 44.92 2.59
3338 4981 6.814043 TCAGATCATTTGGACATCTGAGTAG 58.186 40.000 6.73 0.00 44.92 2.57
3339 4982 5.466058 CAGATCATTTGGACATCTGAGTAGC 59.534 44.000 2.54 0.00 44.35 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.862877 AATCGGTGAATCATCCATGGA 57.137 42.857 18.88 18.88 0.00 3.41
2 3 4.906065 ACAAATCGGTGAATCATCCATG 57.094 40.909 0.00 0.00 0.00 3.66
4 5 4.963276 GAACAAATCGGTGAATCATCCA 57.037 40.909 0.00 0.00 0.00 3.41
17 18 0.788391 AACGCCGACTCGAACAAATC 59.212 50.000 0.00 0.00 0.00 2.17
18 19 0.788391 GAACGCCGACTCGAACAAAT 59.212 50.000 0.00 0.00 0.00 2.32
19 20 1.542272 CGAACGCCGACTCGAACAAA 61.542 55.000 7.41 0.00 41.76 2.83
20 21 2.012414 CGAACGCCGACTCGAACAA 61.012 57.895 7.41 0.00 41.76 2.83
21 22 2.427905 CGAACGCCGACTCGAACA 60.428 61.111 7.41 0.00 41.76 3.18
22 23 3.170585 CCGAACGCCGACTCGAAC 61.171 66.667 13.34 0.00 41.76 3.95
23 24 4.409218 CCCGAACGCCGACTCGAA 62.409 66.667 13.34 0.00 41.76 3.71
51 52 1.468127 CGGTGAATAACTGCATGCACA 59.532 47.619 18.46 9.49 36.33 4.57
85 86 4.273300 ACCATAGATAGATAGGAGCCCC 57.727 50.000 0.00 0.00 0.00 5.80
89 90 5.475220 CCGGCATACCATAGATAGATAGGAG 59.525 48.000 0.00 0.00 34.57 3.69
91 92 4.524714 CCCGGCATACCATAGATAGATAGG 59.475 50.000 0.00 0.00 34.57 2.57
93 94 3.895656 GCCCGGCATACCATAGATAGATA 59.104 47.826 3.91 0.00 34.57 1.98
124 125 1.078918 CTCGCTTCATGTCTGCCCA 60.079 57.895 0.00 0.00 0.00 5.36
225 226 4.199310 GTGTAATTGCAGGCCTATCTCAA 58.801 43.478 3.98 8.18 0.00 3.02
256 257 2.031245 GTGCATGTTGAATTGTGGTCGA 60.031 45.455 0.00 0.00 0.00 4.20
290 291 2.006888 ACATGCCATACGTGTTGCTAC 58.993 47.619 9.69 0.00 46.67 3.58
300 301 3.428870 GCAGATGTACGTACATGCCATAC 59.571 47.826 38.47 24.78 46.20 2.39
330 331 6.552350 ACCAGTAACCTGACAGTAAAAGAGTA 59.448 38.462 0.93 0.00 41.50 2.59
342 343 0.677842 ACCGACACCAGTAACCTGAC 59.322 55.000 0.00 0.00 41.50 3.51
383 384 0.465460 ACTGGCACACGACACCAATT 60.465 50.000 0.00 0.00 31.81 2.32
410 411 5.739630 CGCATCATATCTCGTATTACTGTCC 59.260 44.000 0.00 0.00 0.00 4.02
439 440 6.370994 GCATGATGATAACTACTCCAAGATGG 59.629 42.308 0.00 0.00 39.43 3.51
441 442 7.071069 TGCATGATGATAACTACTCCAAGAT 57.929 36.000 0.00 0.00 0.00 2.40
508 527 6.615264 GTGAATGACACTTCTATGCATGAT 57.385 37.500 10.16 0.00 45.13 2.45
521 540 6.997904 CAGGGGAAACTGAAGTGAATGACAC 61.998 48.000 0.00 0.00 43.82 3.67
531 550 0.111253 AGTGCCAGGGGAAACTGAAG 59.889 55.000 0.00 0.00 40.97 3.02
551 591 4.141981 CCTGTCATTCTCAGCACAGTATCT 60.142 45.833 0.00 0.00 35.46 1.98
556 596 2.619147 CTCCTGTCATTCTCAGCACAG 58.381 52.381 0.00 0.00 36.75 3.66
560 600 0.174389 TCGCTCCTGTCATTCTCAGC 59.826 55.000 0.00 0.00 0.00 4.26
581 621 2.157668 CGACAATGACCTTTGTTCGGAG 59.842 50.000 3.35 0.00 39.85 4.63
584 624 1.399727 GGCGACAATGACCTTTGTTCG 60.400 52.381 3.35 8.52 39.85 3.95
586 626 1.880027 GAGGCGACAATGACCTTTGTT 59.120 47.619 0.00 0.00 39.85 2.83
588 628 1.522668 TGAGGCGACAATGACCTTTG 58.477 50.000 0.00 0.00 32.67 2.77
619 659 3.695830 ACCGTATGTTGACAATGACCT 57.304 42.857 0.00 0.00 0.00 3.85
645 685 6.936900 GGCCTTCTGATTATGATGTTAGCTAA 59.063 38.462 0.86 0.86 0.00 3.09
659 699 2.422519 CCATGCAGTAGGCCTTCTGATT 60.423 50.000 35.85 21.79 43.89 2.57
686 726 1.762957 AGTCCGGTAGTGAATGGGATG 59.237 52.381 0.00 0.00 0.00 3.51
694 734 3.129502 CCGCGAGTCCGGTAGTGA 61.130 66.667 8.23 0.00 43.24 3.41
701 741 2.353607 GCATAGTCCGCGAGTCCG 60.354 66.667 8.23 0.00 39.16 4.79
702 742 1.170919 TAGGCATAGTCCGCGAGTCC 61.171 60.000 8.23 0.00 0.00 3.85
703 743 0.040246 GTAGGCATAGTCCGCGAGTC 60.040 60.000 8.23 0.00 0.00 3.36
704 744 1.783031 CGTAGGCATAGTCCGCGAGT 61.783 60.000 8.23 0.00 33.56 4.18
705 745 1.082038 CGTAGGCATAGTCCGCGAG 60.082 63.158 8.23 0.00 33.56 5.03
706 746 2.549198 CCGTAGGCATAGTCCGCGA 61.549 63.158 8.23 0.00 46.14 5.87
707 747 2.050351 CCGTAGGCATAGTCCGCG 60.050 66.667 0.00 0.00 46.14 6.46
732 772 2.076622 CTCAGGACCTATGCCGACGG 62.077 65.000 10.29 10.29 0.00 4.79
733 773 1.101635 TCTCAGGACCTATGCCGACG 61.102 60.000 0.00 0.00 0.00 5.12
734 774 0.671251 CTCTCAGGACCTATGCCGAC 59.329 60.000 0.00 0.00 0.00 4.79
735 775 0.259065 ACTCTCAGGACCTATGCCGA 59.741 55.000 0.00 0.00 0.00 5.54
736 776 0.387202 CACTCTCAGGACCTATGCCG 59.613 60.000 0.00 0.00 0.00 5.69
737 777 1.781786 TCACTCTCAGGACCTATGCC 58.218 55.000 0.00 0.00 0.00 4.40
738 778 4.022416 CAGTATCACTCTCAGGACCTATGC 60.022 50.000 0.00 0.00 0.00 3.14
739 779 5.009510 CACAGTATCACTCTCAGGACCTATG 59.990 48.000 0.00 0.00 0.00 2.23
740 780 5.136828 CACAGTATCACTCTCAGGACCTAT 58.863 45.833 0.00 0.00 0.00 2.57
741 781 4.527944 CACAGTATCACTCTCAGGACCTA 58.472 47.826 0.00 0.00 0.00 3.08
742 782 3.360867 CACAGTATCACTCTCAGGACCT 58.639 50.000 0.00 0.00 0.00 3.85
743 783 2.159170 GCACAGTATCACTCTCAGGACC 60.159 54.545 0.00 0.00 0.00 4.46
744 784 2.757868 AGCACAGTATCACTCTCAGGAC 59.242 50.000 0.00 0.00 0.00 3.85
745 785 2.757314 CAGCACAGTATCACTCTCAGGA 59.243 50.000 0.00 0.00 0.00 3.86
746 786 2.757314 TCAGCACAGTATCACTCTCAGG 59.243 50.000 0.00 0.00 0.00 3.86
747 787 3.693578 TCTCAGCACAGTATCACTCTCAG 59.306 47.826 0.00 0.00 0.00 3.35
748 788 3.690460 TCTCAGCACAGTATCACTCTCA 58.310 45.455 0.00 0.00 0.00 3.27
749 789 3.694072 ACTCTCAGCACAGTATCACTCTC 59.306 47.826 0.00 0.00 0.00 3.20
750 790 3.443329 CACTCTCAGCACAGTATCACTCT 59.557 47.826 0.00 0.00 0.00 3.24
751 791 3.441922 TCACTCTCAGCACAGTATCACTC 59.558 47.826 0.00 0.00 0.00 3.51
752 792 3.425659 TCACTCTCAGCACAGTATCACT 58.574 45.455 0.00 0.00 0.00 3.41
753 793 3.857549 TCACTCTCAGCACAGTATCAC 57.142 47.619 0.00 0.00 0.00 3.06
754 794 4.339530 GGTATCACTCTCAGCACAGTATCA 59.660 45.833 0.00 0.00 0.00 2.15
755 795 4.339530 TGGTATCACTCTCAGCACAGTATC 59.660 45.833 0.00 0.00 0.00 2.24
756 796 4.281657 TGGTATCACTCTCAGCACAGTAT 58.718 43.478 0.00 0.00 0.00 2.12
757 797 3.696548 CTGGTATCACTCTCAGCACAGTA 59.303 47.826 0.00 0.00 0.00 2.74
758 798 2.495270 CTGGTATCACTCTCAGCACAGT 59.505 50.000 0.00 0.00 0.00 3.55
759 799 3.162202 CTGGTATCACTCTCAGCACAG 57.838 52.381 0.00 0.00 0.00 3.66
763 803 0.741326 TCGCTGGTATCACTCTCAGC 59.259 55.000 0.00 0.00 46.32 4.26
764 804 2.020720 ACTCGCTGGTATCACTCTCAG 58.979 52.381 0.00 0.00 0.00 3.35
765 805 2.130272 ACTCGCTGGTATCACTCTCA 57.870 50.000 0.00 0.00 0.00 3.27
766 806 2.223618 GGAACTCGCTGGTATCACTCTC 60.224 54.545 0.00 0.00 0.00 3.20
767 807 1.751924 GGAACTCGCTGGTATCACTCT 59.248 52.381 0.00 0.00 0.00 3.24
768 808 1.534175 CGGAACTCGCTGGTATCACTC 60.534 57.143 0.00 0.00 0.00 3.51
769 809 0.456221 CGGAACTCGCTGGTATCACT 59.544 55.000 0.00 0.00 0.00 3.41
770 810 0.454600 TCGGAACTCGCTGGTATCAC 59.545 55.000 0.00 0.00 39.05 3.06
771 811 1.135199 GTTCGGAACTCGCTGGTATCA 60.135 52.381 13.49 0.00 39.05 2.15
772 812 1.135199 TGTTCGGAACTCGCTGGTATC 60.135 52.381 20.53 0.00 39.05 2.24
773 813 0.892755 TGTTCGGAACTCGCTGGTAT 59.107 50.000 20.53 0.00 39.05 2.73
774 814 0.675083 TTGTTCGGAACTCGCTGGTA 59.325 50.000 20.53 0.00 39.05 3.25
775 815 0.179067 TTTGTTCGGAACTCGCTGGT 60.179 50.000 20.53 0.00 39.05 4.00
776 816 0.512952 CTTTGTTCGGAACTCGCTGG 59.487 55.000 20.53 3.27 39.05 4.85
777 817 0.512952 CCTTTGTTCGGAACTCGCTG 59.487 55.000 20.53 7.45 39.05 5.18
778 818 0.106149 ACCTTTGTTCGGAACTCGCT 59.894 50.000 20.53 0.00 39.05 4.93
779 819 0.511653 GACCTTTGTTCGGAACTCGC 59.488 55.000 20.53 2.58 39.05 5.03
780 820 1.860676 TGACCTTTGTTCGGAACTCG 58.139 50.000 20.53 9.36 40.90 4.18
781 821 3.564225 ACAATGACCTTTGTTCGGAACTC 59.436 43.478 20.53 10.53 36.43 3.01
782 822 3.551846 ACAATGACCTTTGTTCGGAACT 58.448 40.909 20.53 0.92 36.43 3.01
783 823 3.606153 CGACAATGACCTTTGTTCGGAAC 60.606 47.826 13.86 13.86 39.85 3.62
784 824 2.546368 CGACAATGACCTTTGTTCGGAA 59.454 45.455 3.35 0.00 39.85 4.30
785 825 2.139917 CGACAATGACCTTTGTTCGGA 58.860 47.619 3.35 0.00 39.85 4.55
786 826 1.399727 GCGACAATGACCTTTGTTCGG 60.400 52.381 15.03 0.00 39.85 4.30
787 827 1.399727 GGCGACAATGACCTTTGTTCG 60.400 52.381 3.35 8.52 39.85 3.95
788 828 1.880027 AGGCGACAATGACCTTTGTTC 59.120 47.619 0.00 0.39 39.85 3.18
789 829 1.880027 GAGGCGACAATGACCTTTGTT 59.120 47.619 0.00 0.00 39.85 2.83
790 830 1.202758 TGAGGCGACAATGACCTTTGT 60.203 47.619 0.00 1.59 42.37 2.83
791 831 1.522668 TGAGGCGACAATGACCTTTG 58.477 50.000 0.00 0.00 32.67 2.77
792 832 2.270352 TTGAGGCGACAATGACCTTT 57.730 45.000 0.00 0.00 32.67 3.11
793 833 2.496899 ATTGAGGCGACAATGACCTT 57.503 45.000 10.95 0.00 38.76 3.50
803 843 3.199946 ACCTTAAGATTCCATTGAGGCGA 59.800 43.478 3.36 0.00 37.01 5.54
817 857 5.246203 ACTTATGCTGACAGTGACCTTAAGA 59.754 40.000 3.36 0.00 0.00 2.10
818 858 5.482908 ACTTATGCTGACAGTGACCTTAAG 58.517 41.667 3.99 7.79 0.00 1.85
881 921 0.879400 CTGAGATGGGATCGTGCAGC 60.879 60.000 0.00 0.00 0.00 5.25
883 923 1.417288 ATCTGAGATGGGATCGTGCA 58.583 50.000 0.00 0.00 0.00 4.57
903 944 3.833732 TCCACGAGAAGGCTATACTCAT 58.166 45.455 13.69 0.00 0.00 2.90
905 946 4.038162 ACAATCCACGAGAAGGCTATACTC 59.962 45.833 0.00 0.00 0.00 2.59
906 947 3.961408 ACAATCCACGAGAAGGCTATACT 59.039 43.478 0.00 0.00 0.00 2.12
907 948 4.323553 ACAATCCACGAGAAGGCTATAC 57.676 45.455 0.00 0.00 0.00 1.47
927 968 7.594386 GCTCTATCTTTCGGTTTACCATAGTAC 59.406 40.741 0.00 0.00 35.14 2.73
997 2517 0.611618 TGGAATGCGTTGGCCATCTT 60.612 50.000 6.09 0.00 38.85 2.40
998 2518 0.396139 ATGGAATGCGTTGGCCATCT 60.396 50.000 6.09 0.00 36.43 2.90
999 2519 0.031178 GATGGAATGCGTTGGCCATC 59.969 55.000 18.56 18.56 46.84 3.51
1000 2520 1.727511 CGATGGAATGCGTTGGCCAT 61.728 55.000 6.09 10.81 43.46 4.40
1002 2522 2.408835 CGATGGAATGCGTTGGCC 59.591 61.111 0.00 0.00 38.85 5.36
1004 2524 2.327002 CTGCCGATGGAATGCGTTGG 62.327 60.000 0.00 0.00 0.00 3.77
1005 2525 1.063006 CTGCCGATGGAATGCGTTG 59.937 57.895 0.00 0.00 0.00 4.10
1007 2527 3.204827 GCTGCCGATGGAATGCGT 61.205 61.111 0.00 0.00 0.00 5.24
1008 2528 4.303603 CGCTGCCGATGGAATGCG 62.304 66.667 0.00 0.00 36.29 4.73
1011 2531 2.586079 CGTCGCTGCCGATGGAAT 60.586 61.111 0.00 0.00 46.38 3.01
1125 2655 0.883833 CCTTGTGTAGCTTGGCTTGG 59.116 55.000 0.00 0.00 40.44 3.61
1138 2668 2.981560 GCGCACCCATGTCCTTGTG 61.982 63.158 0.30 0.00 0.00 3.33
1162 2703 1.440893 CTGCCATCACGAGGAGGAG 59.559 63.158 0.00 0.00 0.00 3.69
1380 2924 0.460811 GGTGCTCGCTGATGATGTCA 60.461 55.000 0.00 0.00 35.05 3.58
1548 3141 0.107945 GAGGCAGGTGCTACAAGAGG 60.108 60.000 1.26 0.00 41.70 3.69
1551 3144 1.896220 TTTGAGGCAGGTGCTACAAG 58.104 50.000 1.26 0.00 41.70 3.16
1552 3145 2.557924 CAATTTGAGGCAGGTGCTACAA 59.442 45.455 1.26 6.16 41.70 2.41
1554 3147 1.135286 GCAATTTGAGGCAGGTGCTAC 60.135 52.381 0.00 0.00 41.70 3.58
1555 3148 1.176527 GCAATTTGAGGCAGGTGCTA 58.823 50.000 0.00 0.00 41.70 3.49
1556 3149 0.828762 TGCAATTTGAGGCAGGTGCT 60.829 50.000 0.00 0.00 41.70 4.40
1557 3150 0.033781 TTGCAATTTGAGGCAGGTGC 59.966 50.000 0.00 0.00 41.68 5.01
1558 3151 2.137523 GTTTGCAATTTGAGGCAGGTG 58.862 47.619 0.00 0.00 41.68 4.00
1561 3154 2.823984 TGTGTTTGCAATTTGAGGCAG 58.176 42.857 0.00 0.00 41.68 4.85
1597 3190 1.131126 GGATGATGTTCACCTGCAACG 59.869 52.381 0.00 0.00 0.00 4.10
1598 3191 1.131126 CGGATGATGTTCACCTGCAAC 59.869 52.381 0.00 0.00 0.00 4.17
1599 3192 1.271325 ACGGATGATGTTCACCTGCAA 60.271 47.619 0.00 0.00 0.00 4.08
2200 3836 0.034896 GAAGTTGTCCCAGAAGGCGA 59.965 55.000 0.00 0.00 34.51 5.54
2237 3873 0.529773 GGCTGACGATGATGCGGTTA 60.530 55.000 0.00 0.00 35.12 2.85
2291 3927 0.107459 GGATGGTGGAGAGGTTGAGC 60.107 60.000 0.00 0.00 0.00 4.26
2332 3968 3.063650 AGGGTAATGGTGGATTATGGCT 58.936 45.455 0.00 0.00 0.00 4.75
2342 3978 5.805728 AGAGAAAACAGTAGGGTAATGGTG 58.194 41.667 0.00 0.00 0.00 4.17
2343 3979 7.624077 AGATAGAGAAAACAGTAGGGTAATGGT 59.376 37.037 0.00 0.00 0.00 3.55
2344 3980 8.024145 AGATAGAGAAAACAGTAGGGTAATGG 57.976 38.462 0.00 0.00 0.00 3.16
2357 3993 5.518487 GCTAGCACAGTGAGATAGAGAAAAC 59.482 44.000 15.77 0.00 0.00 2.43
2363 4005 2.919228 TCGCTAGCACAGTGAGATAGA 58.081 47.619 16.45 0.00 38.89 1.98
2417 4060 8.562892 AGGATGATAAATAAAAATCACGCAGAG 58.437 33.333 0.00 0.00 35.06 3.35
2418 4061 8.450578 AGGATGATAAATAAAAATCACGCAGA 57.549 30.769 0.00 0.00 35.06 4.26
2419 4062 8.562892 AGAGGATGATAAATAAAAATCACGCAG 58.437 33.333 0.00 0.00 35.06 5.18
2420 4063 8.344831 CAGAGGATGATAAATAAAAATCACGCA 58.655 33.333 0.00 0.00 35.06 5.24
2421 4064 7.324616 GCAGAGGATGATAAATAAAAATCACGC 59.675 37.037 0.00 0.00 35.06 5.34
2422 4065 7.805071 GGCAGAGGATGATAAATAAAAATCACG 59.195 37.037 0.00 0.00 35.06 4.35
2423 4066 8.632679 TGGCAGAGGATGATAAATAAAAATCAC 58.367 33.333 0.00 0.00 35.06 3.06
2424 4067 8.765488 TGGCAGAGGATGATAAATAAAAATCA 57.235 30.769 0.00 0.00 36.60 2.57
2425 4068 9.635520 CATGGCAGAGGATGATAAATAAAAATC 57.364 33.333 0.00 0.00 0.00 2.17
2426 4069 9.151177 ACATGGCAGAGGATGATAAATAAAAAT 57.849 29.630 0.00 0.00 0.00 1.82
2427 4070 8.537728 ACATGGCAGAGGATGATAAATAAAAA 57.462 30.769 0.00 0.00 0.00 1.94
2428 4071 8.000709 AGACATGGCAGAGGATGATAAATAAAA 58.999 33.333 0.00 0.00 0.00 1.52
2429 4072 7.520798 AGACATGGCAGAGGATGATAAATAAA 58.479 34.615 0.00 0.00 0.00 1.40
2430 4073 7.083062 AGACATGGCAGAGGATGATAAATAA 57.917 36.000 0.00 0.00 0.00 1.40
2431 4074 6.692849 AGACATGGCAGAGGATGATAAATA 57.307 37.500 0.00 0.00 0.00 1.40
2432 4075 5.579753 AGACATGGCAGAGGATGATAAAT 57.420 39.130 0.00 0.00 0.00 1.40
2433 4076 5.512060 GCTAGACATGGCAGAGGATGATAAA 60.512 44.000 0.00 0.00 32.15 1.40
2434 4077 4.020751 GCTAGACATGGCAGAGGATGATAA 60.021 45.833 0.00 0.00 32.15 1.75
2435 4078 3.513119 GCTAGACATGGCAGAGGATGATA 59.487 47.826 0.00 0.00 32.15 2.15
2436 4079 2.302445 GCTAGACATGGCAGAGGATGAT 59.698 50.000 0.00 0.00 32.15 2.45
2437 4080 1.690893 GCTAGACATGGCAGAGGATGA 59.309 52.381 0.00 0.00 32.15 2.92
2438 4081 1.415289 TGCTAGACATGGCAGAGGATG 59.585 52.381 0.00 0.00 38.10 3.51
2439 4082 1.798626 TGCTAGACATGGCAGAGGAT 58.201 50.000 0.00 0.00 38.10 3.24
2440 4083 3.305181 TGCTAGACATGGCAGAGGA 57.695 52.632 0.00 0.00 38.10 3.71
2445 4088 2.630098 GGATACTCTGCTAGACATGGCA 59.370 50.000 0.00 0.00 41.13 4.92
2446 4089 2.352225 CGGATACTCTGCTAGACATGGC 60.352 54.545 0.00 0.00 0.00 4.40
2447 4090 2.887783 ACGGATACTCTGCTAGACATGG 59.112 50.000 0.00 0.00 0.00 3.66
2448 4091 3.057876 GGACGGATACTCTGCTAGACATG 60.058 52.174 0.00 0.00 0.00 3.21
2449 4092 3.150767 GGACGGATACTCTGCTAGACAT 58.849 50.000 0.00 0.00 0.00 3.06
2450 4093 2.172930 AGGACGGATACTCTGCTAGACA 59.827 50.000 0.00 0.00 0.00 3.41
2451 4094 2.809696 GAGGACGGATACTCTGCTAGAC 59.190 54.545 0.00 0.00 32.27 2.59
2452 4095 2.706723 AGAGGACGGATACTCTGCTAGA 59.293 50.000 0.00 0.00 45.28 2.43
2453 4096 3.134574 AGAGGACGGATACTCTGCTAG 57.865 52.381 0.00 0.00 45.28 3.42
2454 4097 3.579534 AAGAGGACGGATACTCTGCTA 57.420 47.619 0.00 0.00 46.42 3.49
2466 4109 4.358494 ACTCAGTCGAATTAAGAGGACG 57.642 45.455 4.11 0.00 34.68 4.79
2551 4194 5.418840 GGAGGCAGAATTTCCAAGATGTAAA 59.581 40.000 0.00 0.00 0.00 2.01
2553 4196 4.018506 TGGAGGCAGAATTTCCAAGATGTA 60.019 41.667 0.00 0.00 38.03 2.29
2555 4198 3.359033 TGGAGGCAGAATTTCCAAGATG 58.641 45.455 0.00 0.00 38.03 2.90
2556 4199 3.744940 TGGAGGCAGAATTTCCAAGAT 57.255 42.857 0.00 0.00 38.03 2.40
2557 4200 3.524095 TTGGAGGCAGAATTTCCAAGA 57.476 42.857 4.71 0.00 43.94 3.02
2560 4203 3.454719 TGATTGGAGGCAGAATTTCCA 57.545 42.857 0.00 0.00 39.16 3.53
2561 4204 4.213513 AGATGATTGGAGGCAGAATTTCC 58.786 43.478 0.00 0.00 0.00 3.13
2562 4205 5.848833 AAGATGATTGGAGGCAGAATTTC 57.151 39.130 0.00 0.00 0.00 2.17
2620 4263 1.618343 GTCCCCAGGTGTTTCCATTTG 59.382 52.381 0.00 0.00 39.02 2.32
2674 4317 2.631545 GTGGTTCCTGTACTGTACTGGT 59.368 50.000 30.71 1.40 45.05 4.00
2683 4326 0.601558 TGCGAGAGTGGTTCCTGTAC 59.398 55.000 0.00 0.00 0.00 2.90
2684 4327 1.334160 TTGCGAGAGTGGTTCCTGTA 58.666 50.000 0.00 0.00 0.00 2.74
2685 4328 0.687354 ATTGCGAGAGTGGTTCCTGT 59.313 50.000 0.00 0.00 0.00 4.00
2686 4329 1.813513 AATTGCGAGAGTGGTTCCTG 58.186 50.000 0.00 0.00 0.00 3.86
2687 4330 3.914426 ATAATTGCGAGAGTGGTTCCT 57.086 42.857 0.00 0.00 0.00 3.36
2688 4331 5.357257 TCTTATAATTGCGAGAGTGGTTCC 58.643 41.667 0.00 0.00 0.00 3.62
2698 4341 5.924356 TGGGATCACTTCTTATAATTGCGA 58.076 37.500 0.00 0.00 0.00 5.10
2719 4362 3.070015 ACTTGAGTTGCCTTTCCATTTGG 59.930 43.478 0.00 0.00 0.00 3.28
2727 4370 4.469657 TGGATTACACTTGAGTTGCCTTT 58.530 39.130 0.00 0.00 0.00 3.11
2775 4418 3.773418 TTACCCCGTGTCTTGAAATGA 57.227 42.857 0.00 0.00 0.00 2.57
2789 4432 4.709886 ACTAAAAGCCACATTGATTACCCC 59.290 41.667 0.00 0.00 0.00 4.95
2809 4452 1.982395 CCCTCAGCCGTGGACACTA 60.982 63.158 0.56 0.00 0.00 2.74
2830 4473 0.179174 CAAAACCGCAACGATAGCCC 60.179 55.000 0.00 0.00 42.67 5.19
2846 4489 3.010027 TGATCTACAACATGGGAGCCAAA 59.990 43.478 0.00 0.00 36.95 3.28
2928 4571 3.989817 GCTGAAAGTTTCATCGCCATTTT 59.010 39.130 18.35 0.00 39.30 1.82
2963 4606 4.693042 TTTTCCCTCTCCGTTTCTGTTA 57.307 40.909 0.00 0.00 0.00 2.41
2991 4634 7.846101 AAAAATCCTCTTCCATTTCTGTTCT 57.154 32.000 0.00 0.00 0.00 3.01
3021 4664 2.544069 GGAAAACGCCGTTTCATTTCCA 60.544 45.455 20.59 0.00 45.29 3.53
3027 4670 1.357334 GCTGGAAAACGCCGTTTCA 59.643 52.632 16.42 9.62 38.93 2.69
3033 4676 0.660300 CTTGTTCGCTGGAAAACGCC 60.660 55.000 0.00 0.00 33.05 5.68
3041 4684 0.597568 TTTCCATGCTTGTTCGCTGG 59.402 50.000 0.00 0.00 32.80 4.85
3045 4688 3.003689 AGTTCTGTTTCCATGCTTGTTCG 59.996 43.478 0.00 0.00 0.00 3.95
3047 4690 5.343307 AAAGTTCTGTTTCCATGCTTGTT 57.657 34.783 0.00 0.00 0.00 2.83
3058 4701 9.981114 CCATATTTTAAGTGGAAAGTTCTGTTT 57.019 29.630 0.00 0.00 34.94 2.83
3059 4702 8.585018 CCCATATTTTAAGTGGAAAGTTCTGTT 58.415 33.333 0.00 0.00 34.94 3.16
3060 4703 7.309805 GCCCATATTTTAAGTGGAAAGTTCTGT 60.310 37.037 0.00 0.00 34.94 3.41
3072 4715 5.481473 CCAGCCATATGCCCATATTTTAAGT 59.519 40.000 0.00 0.00 42.71 2.24
3073 4716 5.716228 TCCAGCCATATGCCCATATTTTAAG 59.284 40.000 0.00 0.00 42.71 1.85
3076 4719 3.834231 GTCCAGCCATATGCCCATATTTT 59.166 43.478 0.00 0.00 42.71 1.82
3119 4762 4.827087 ATCGCGGGTGCAGCTGAG 62.827 66.667 28.35 24.46 42.97 3.35
3122 4765 2.310327 TATTCATCGCGGGTGCAGCT 62.310 55.000 16.65 0.00 42.97 4.24
3123 4766 1.835483 CTATTCATCGCGGGTGCAGC 61.835 60.000 7.55 7.55 42.97 5.25
3124 4767 0.249447 TCTATTCATCGCGGGTGCAG 60.249 55.000 6.13 4.53 42.97 4.41
3125 4768 0.176910 TTCTATTCATCGCGGGTGCA 59.823 50.000 6.13 0.00 42.97 4.57
3126 4769 1.295792 TTTCTATTCATCGCGGGTGC 58.704 50.000 6.13 0.00 37.91 5.01
3127 4770 4.750098 AGTATTTTCTATTCATCGCGGGTG 59.250 41.667 6.13 6.13 0.00 4.61
3128 4771 4.957296 AGTATTTTCTATTCATCGCGGGT 58.043 39.130 6.13 0.00 0.00 5.28
3129 4772 4.389077 GGAGTATTTTCTATTCATCGCGGG 59.611 45.833 6.13 0.00 0.00 6.13
3130 4773 4.389077 GGGAGTATTTTCTATTCATCGCGG 59.611 45.833 6.13 0.00 0.00 6.46
3131 4774 5.230942 AGGGAGTATTTTCTATTCATCGCG 58.769 41.667 0.00 0.00 0.00 5.87
3132 4775 6.367422 CAGAGGGAGTATTTTCTATTCATCGC 59.633 42.308 0.00 0.00 0.00 4.58
3133 4776 7.437748 ACAGAGGGAGTATTTTCTATTCATCG 58.562 38.462 0.00 0.00 0.00 3.84
3136 4779 9.886132 GTTTACAGAGGGAGTATTTTCTATTCA 57.114 33.333 0.00 0.00 0.00 2.57
3148 4791 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
3149 4792 8.861086 TGCTCTTATATTAGTTTACAGAGGGAG 58.139 37.037 0.00 0.00 0.00 4.30
3150 4793 8.777578 TGCTCTTATATTAGTTTACAGAGGGA 57.222 34.615 0.00 0.00 0.00 4.20
3197 4840 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
3198 4841 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
3199 4842 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
3200 4843 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
3201 4844 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
3202 4845 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
3203 4846 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
3204 4847 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
3205 4848 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
3206 4849 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
3207 4850 9.071276 TGTACTCCCTCCGTAAACTAATATAAG 57.929 37.037 0.00 0.00 0.00 1.73
3208 4851 8.995027 TGTACTCCCTCCGTAAACTAATATAA 57.005 34.615 0.00 0.00 0.00 0.98
3209 4852 8.995027 TTGTACTCCCTCCGTAAACTAATATA 57.005 34.615 0.00 0.00 0.00 0.86
3210 4853 7.902920 TTGTACTCCCTCCGTAAACTAATAT 57.097 36.000 0.00 0.00 0.00 1.28
3211 4854 7.716799 TTTGTACTCCCTCCGTAAACTAATA 57.283 36.000 0.00 0.00 0.00 0.98
3212 4855 6.610075 TTTGTACTCCCTCCGTAAACTAAT 57.390 37.500 0.00 0.00 0.00 1.73
3213 4856 6.183360 TGTTTTGTACTCCCTCCGTAAACTAA 60.183 38.462 0.00 0.00 0.00 2.24
3214 4857 5.304101 TGTTTTGTACTCCCTCCGTAAACTA 59.696 40.000 0.00 0.00 0.00 2.24
3215 4858 4.101430 TGTTTTGTACTCCCTCCGTAAACT 59.899 41.667 0.00 0.00 0.00 2.66
3216 4859 4.379652 TGTTTTGTACTCCCTCCGTAAAC 58.620 43.478 0.00 0.00 0.00 2.01
3217 4860 4.686191 TGTTTTGTACTCCCTCCGTAAA 57.314 40.909 0.00 0.00 0.00 2.01
3218 4861 4.686191 TTGTTTTGTACTCCCTCCGTAA 57.314 40.909 0.00 0.00 0.00 3.18
3219 4862 4.686191 TTTGTTTTGTACTCCCTCCGTA 57.314 40.909 0.00 0.00 0.00 4.02
3220 4863 3.564053 TTTGTTTTGTACTCCCTCCGT 57.436 42.857 0.00 0.00 0.00 4.69
3221 4864 5.243207 AGTATTTGTTTTGTACTCCCTCCG 58.757 41.667 0.00 0.00 0.00 4.63
3222 4865 7.618137 TCTAGTATTTGTTTTGTACTCCCTCC 58.382 38.462 0.00 0.00 31.58 4.30
3223 4866 9.498176 TTTCTAGTATTTGTTTTGTACTCCCTC 57.502 33.333 0.00 0.00 31.58 4.30
3224 4867 9.856162 TTTTCTAGTATTTGTTTTGTACTCCCT 57.144 29.630 0.00 0.00 31.58 4.20
3270 4913 6.649973 CACACCAAATATCTTCCATGCAAAAA 59.350 34.615 0.00 0.00 0.00 1.94
3271 4914 6.164876 CACACCAAATATCTTCCATGCAAAA 58.835 36.000 0.00 0.00 0.00 2.44
3272 4915 5.245751 ACACACCAAATATCTTCCATGCAAA 59.754 36.000 0.00 0.00 0.00 3.68
3273 4916 4.771577 ACACACCAAATATCTTCCATGCAA 59.228 37.500 0.00 0.00 0.00 4.08
3274 4917 4.158209 CACACACCAAATATCTTCCATGCA 59.842 41.667 0.00 0.00 0.00 3.96
3275 4918 4.398988 TCACACACCAAATATCTTCCATGC 59.601 41.667 0.00 0.00 0.00 4.06
3276 4919 5.449588 GCTCACACACCAAATATCTTCCATG 60.450 44.000 0.00 0.00 0.00 3.66
3277 4920 4.641989 GCTCACACACCAAATATCTTCCAT 59.358 41.667 0.00 0.00 0.00 3.41
3278 4921 4.009675 GCTCACACACCAAATATCTTCCA 58.990 43.478 0.00 0.00 0.00 3.53
3279 4922 4.095483 CAGCTCACACACCAAATATCTTCC 59.905 45.833 0.00 0.00 0.00 3.46
3280 4923 4.437930 GCAGCTCACACACCAAATATCTTC 60.438 45.833 0.00 0.00 0.00 2.87
3281 4924 3.441572 GCAGCTCACACACCAAATATCTT 59.558 43.478 0.00 0.00 0.00 2.40
3282 4925 3.012518 GCAGCTCACACACCAAATATCT 58.987 45.455 0.00 0.00 0.00 1.98
3283 4926 2.223112 CGCAGCTCACACACCAAATATC 60.223 50.000 0.00 0.00 0.00 1.63
3284 4927 1.739466 CGCAGCTCACACACCAAATAT 59.261 47.619 0.00 0.00 0.00 1.28
3285 4928 1.155889 CGCAGCTCACACACCAAATA 58.844 50.000 0.00 0.00 0.00 1.40
3286 4929 1.951510 CGCAGCTCACACACCAAAT 59.048 52.632 0.00 0.00 0.00 2.32
3287 4930 3.419828 CGCAGCTCACACACCAAA 58.580 55.556 0.00 0.00 0.00 3.28
3300 4943 4.087510 TGATCTGAAATTTGAAGCGCAG 57.912 40.909 11.47 0.00 0.00 5.18
3301 4944 4.707030 ATGATCTGAAATTTGAAGCGCA 57.293 36.364 11.47 0.00 0.00 6.09
3302 4945 5.220340 CCAAATGATCTGAAATTTGAAGCGC 60.220 40.000 21.43 0.00 43.41 5.92
3303 4946 6.034256 GTCCAAATGATCTGAAATTTGAAGCG 59.966 38.462 21.43 10.95 43.41 4.68
3304 4947 6.869913 TGTCCAAATGATCTGAAATTTGAAGC 59.130 34.615 21.43 14.41 43.41 3.86
3305 4948 8.997621 ATGTCCAAATGATCTGAAATTTGAAG 57.002 30.769 21.43 11.66 43.41 3.02
3306 4949 8.809066 AGATGTCCAAATGATCTGAAATTTGAA 58.191 29.630 21.43 7.16 43.41 2.69
3307 4950 8.248253 CAGATGTCCAAATGATCTGAAATTTGA 58.752 33.333 21.43 9.47 43.94 2.69
3308 4951 8.248253 TCAGATGTCCAAATGATCTGAAATTTG 58.752 33.333 16.38 16.38 45.77 2.32
3309 4952 8.357290 TCAGATGTCCAAATGATCTGAAATTT 57.643 30.769 8.17 0.00 45.77 1.82
3310 4953 7.949690 TCAGATGTCCAAATGATCTGAAATT 57.050 32.000 8.17 0.00 45.77 1.82
3314 4957 5.688814 ACTCAGATGTCCAAATGATCTGA 57.311 39.130 0.00 0.00 46.29 3.27
3315 4958 5.466058 GCTACTCAGATGTCCAAATGATCTG 59.534 44.000 0.00 0.00 43.01 2.90
3316 4959 5.609423 GCTACTCAGATGTCCAAATGATCT 58.391 41.667 0.00 0.00 0.00 2.75
3317 4960 5.921004 GCTACTCAGATGTCCAAATGATC 57.079 43.478 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.