Multiple sequence alignment - TraesCS5A01G236000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G236000 chr5A 100.000 8660 0 0 1 8660 451731556 451722897 0.000000e+00 15993.0
1 TraesCS5A01G236000 chr5A 94.444 162 9 0 2092 2253 320214244 320214405 5.190000e-62 250.0
2 TraesCS5A01G236000 chr5D 95.477 2830 82 6 5016 7833 351333270 351330475 0.000000e+00 4475.0
3 TraesCS5A01G236000 chr5D 93.042 1466 64 13 2251 3682 351336154 351334693 0.000000e+00 2108.0
4 TraesCS5A01G236000 chr5D 94.037 1308 51 11 3679 4963 351334588 351333285 0.000000e+00 1958.0
5 TraesCS5A01G236000 chr5D 94.072 1029 31 11 874 1885 351337312 351336297 0.000000e+00 1535.0
6 TraesCS5A01G236000 chr5D 91.771 717 42 10 7832 8539 351330394 351329686 0.000000e+00 981.0
7 TraesCS5A01G236000 chr5D 92.560 336 24 1 478 813 351393340 351393006 1.690000e-131 481.0
8 TraesCS5A01G236000 chr5D 98.165 109 2 0 1985 2093 351336260 351336152 3.190000e-44 191.0
9 TraesCS5A01G236000 chr5B 93.568 2332 87 15 5013 7331 412447950 412445669 0.000000e+00 3417.0
10 TraesCS5A01G236000 chr5B 93.706 1144 55 6 741 1874 412452102 412450966 0.000000e+00 1698.0
11 TraesCS5A01G236000 chr5B 91.561 1185 59 16 7364 8539 412445677 412444525 0.000000e+00 1596.0
12 TraesCS5A01G236000 chr5B 96.226 901 32 2 2784 3682 412450271 412449371 0.000000e+00 1474.0
13 TraesCS5A01G236000 chr5B 91.199 1034 59 15 4003 5026 412448978 412447967 0.000000e+00 1376.0
14 TraesCS5A01G236000 chr5B 90.985 599 28 16 181 755 412452715 412452119 0.000000e+00 784.0
15 TraesCS5A01G236000 chr5B 92.710 535 28 7 2251 2782 412450873 412450347 0.000000e+00 761.0
16 TraesCS5A01G236000 chr5B 94.265 279 14 2 3679 3955 412449266 412448988 8.040000e-115 425.0
17 TraesCS5A01G236000 chr5B 99.000 100 1 0 1994 2093 412450970 412450871 6.910000e-41 180.0
18 TraesCS5A01G236000 chr5B 94.845 97 4 1 8564 8660 56365377 56365472 5.420000e-32 150.0
19 TraesCS5A01G236000 chr5B 76.774 155 30 6 6466 6615 386643243 386643090 2.000000e-11 82.4
20 TraesCS5A01G236000 chr3A 93.939 165 10 0 2090 2254 585298144 585297980 5.190000e-62 250.0
21 TraesCS5A01G236000 chr2A 93.413 167 11 0 2090 2256 184561317 184561151 1.870000e-61 248.0
22 TraesCS5A01G236000 chr2A 83.735 166 23 3 2382 2546 59070572 59070410 4.190000e-33 154.0
23 TraesCS5A01G236000 chr2D 92.899 169 10 2 2092 2259 296364209 296364042 2.410000e-60 244.0
24 TraesCS5A01G236000 chr2D 92.857 168 12 0 2089 2256 299891718 299891551 2.410000e-60 244.0
25 TraesCS5A01G236000 chr2B 93.373 166 9 2 2092 2256 366017519 366017683 2.410000e-60 244.0
26 TraesCS5A01G236000 chr2B 96.947 131 3 1 1869 1998 353573468 353573598 1.460000e-52 219.0
27 TraesCS5A01G236000 chr2B 93.151 146 5 5 1872 2012 136176799 136176654 8.810000e-50 209.0
28 TraesCS5A01G236000 chr2B 96.907 97 2 1 8565 8660 514372194 514372290 2.500000e-35 161.0
29 TraesCS5A01G236000 chr3D 93.293 164 11 0 2092 2255 87926000 87926163 8.690000e-60 243.0
30 TraesCS5A01G236000 chr1D 90.909 176 14 2 2092 2266 324412389 324412215 1.450000e-57 235.0
31 TraesCS5A01G236000 chr1B 90.909 176 14 2 2092 2266 436689151 436688977 1.450000e-57 235.0
32 TraesCS5A01G236000 chr1B 91.837 147 10 2 1853 1998 626226861 626227006 4.100000e-48 204.0
33 TraesCS5A01G236000 chr1B 95.833 96 4 0 8565 8660 27293815 27293720 1.160000e-33 156.0
34 TraesCS5A01G236000 chr1B 98.276 58 1 0 8603 8660 252030442 252030385 1.540000e-17 102.0
35 TraesCS5A01G236000 chr7D 96.241 133 3 2 1867 1998 150359431 150359300 5.260000e-52 217.0
36 TraesCS5A01G236000 chr7D 96.667 90 2 1 8571 8660 535601742 535601654 1.950000e-31 148.0
37 TraesCS5A01G236000 chr7D 94.444 90 3 2 8571 8660 259020342 259020429 4.220000e-28 137.0
38 TraesCS5A01G236000 chr4B 96.241 133 4 1 1872 2003 660689369 660689501 5.260000e-52 217.0
39 TraesCS5A01G236000 chr4B 93.617 141 8 1 1858 1997 82019108 82019248 8.810000e-50 209.0
40 TraesCS5A01G236000 chr4B 100.000 99 0 0 8562 8660 220392425 220392327 5.340000e-42 183.0
41 TraesCS5A01G236000 chr4B 100.000 92 0 0 8569 8660 241710980 241710889 4.160000e-38 171.0
42 TraesCS5A01G236000 chr4B 95.833 96 1 2 8565 8660 299463162 299463254 1.510000e-32 152.0
43 TraesCS5A01G236000 chr4B 83.673 98 11 5 2429 2524 617285831 617285925 4.310000e-13 87.9
44 TraesCS5A01G236000 chr7B 95.522 134 5 1 1872 2004 705715677 705715810 6.810000e-51 213.0
45 TraesCS5A01G236000 chr7B 97.753 89 1 1 8572 8660 684321828 684321915 1.510000e-32 152.0
46 TraesCS5A01G236000 chr1A 94.891 137 5 2 1870 2004 486045771 486045907 6.810000e-51 213.0
47 TraesCS5A01G236000 chr1A 97.917 96 2 0 8565 8660 49093814 49093719 5.380000e-37 167.0
48 TraesCS5A01G236000 chr1A 98.795 83 1 0 8578 8660 271884700 271884782 1.950000e-31 148.0
49 TraesCS5A01G236000 chr6B 91.946 149 9 3 1863 2008 495435708 495435560 1.140000e-48 206.0
50 TraesCS5A01G236000 chr6A 98.795 83 1 0 8578 8660 38448418 38448500 1.950000e-31 148.0
51 TraesCS5A01G236000 chr6A 95.402 87 1 3 8565 8649 109129133 109129218 1.520000e-27 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G236000 chr5A 451722897 451731556 8659 True 15993.000000 15993 100.000000 1 8660 1 chr5A.!!$R1 8659
1 TraesCS5A01G236000 chr5D 351329686 351337312 7626 True 1874.666667 4475 94.427333 874 8539 6 chr5D.!!$R2 7665
2 TraesCS5A01G236000 chr5B 412444525 412452715 8190 True 1301.222222 3417 93.691111 181 8539 9 chr5B.!!$R2 8358

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
861 927 0.034186 CATGCTCCTTTACCAGCCCA 60.034 55.000 0.00 0.0 34.47 5.36 F
862 928 0.257039 ATGCTCCTTTACCAGCCCAG 59.743 55.000 0.00 0.0 34.47 4.45 F
1536 1609 1.450312 CAAGGAGGCCGAGCGATTT 60.450 57.895 0.00 0.0 0.00 2.17 F
1893 1976 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 F
2105 2188 0.248565 GGTTGTACTCCCTCCGTTCC 59.751 60.000 0.00 0.0 0.00 3.62 F
2507 2591 0.383949 AACGTTCGCAAATGCCAACT 59.616 45.000 12.77 0.0 39.47 3.16 F
3688 3857 0.874175 CGAGTGCACCTGTCACGAAA 60.874 55.000 14.63 0.0 39.31 3.46 F
4000 4286 1.377725 GTGATGGCCTCCCACACAG 60.378 63.158 3.32 0.0 45.77 3.66 F
4368 4660 1.531423 ATCTGGCTGCTGTTTGTCTG 58.469 50.000 0.00 0.0 0.00 3.51 F
4714 5014 1.676529 AGCACAGCAGATGAATGATGC 59.323 47.619 0.00 0.0 40.22 3.91 F
5063 5399 1.705002 TTGCCTGGCCGCCTATATGT 61.705 55.000 17.53 0.0 0.00 2.29 F
6694 7041 1.243902 TTTTAAGCCCTTCCAGTGCG 58.756 50.000 0.00 0.0 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 1954 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59 R
1872 1955 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85 R
2507 2591 1.301401 CAAACGTTCGCTGGGAGGA 60.301 57.895 0.00 0.00 0.00 3.71 R
3709 3988 0.307760 CGCACAAAGTCACTTGTCCC 59.692 55.000 0.00 0.00 37.43 4.46 R
3713 3992 1.299541 AGACCGCACAAAGTCACTTG 58.700 50.000 0.00 0.00 35.38 3.16 R
4354 4646 0.516439 GAGCTCAGACAAACAGCAGC 59.484 55.000 9.40 0.00 35.46 5.25 R
4891 5197 2.372172 AGTTGCTAGCACTTAACCACCT 59.628 45.455 19.17 0.00 0.00 4.00 R
5689 6029 1.489230 AGTGGAACCAAAACTCCGTCT 59.511 47.619 0.00 0.00 37.80 4.18 R
6139 6486 0.748005 CCTTGCCATAACCTCCACCG 60.748 60.000 0.00 0.00 0.00 4.94 R
6628 6975 0.319469 GTTTGAAATGTGTGGGCCGG 60.319 55.000 0.00 0.00 0.00 6.13 R
6785 7132 1.067354 CCATTCCAAGCTCAGCAAACC 60.067 52.381 0.00 0.00 0.00 3.27 R
8551 8991 0.621082 GGGAGGGACTAAGCAAGCTT 59.379 55.000 12.42 12.42 41.55 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.616969 GCTGAACCGAAGCAACTCA 58.383 52.632 0.00 0.00 40.52 3.41
21 22 0.944386 GCTGAACCGAAGCAACTCAA 59.056 50.000 0.00 0.00 40.52 3.02
22 23 1.333619 GCTGAACCGAAGCAACTCAAA 59.666 47.619 0.00 0.00 40.52 2.69
23 24 2.603173 GCTGAACCGAAGCAACTCAAAG 60.603 50.000 0.00 0.00 40.52 2.77
24 25 1.333619 TGAACCGAAGCAACTCAAAGC 59.666 47.619 0.00 0.00 0.00 3.51
25 26 0.668535 AACCGAAGCAACTCAAAGCC 59.331 50.000 0.00 0.00 0.00 4.35
26 27 0.179018 ACCGAAGCAACTCAAAGCCT 60.179 50.000 0.00 0.00 0.00 4.58
27 28 1.071699 ACCGAAGCAACTCAAAGCCTA 59.928 47.619 0.00 0.00 0.00 3.93
28 29 2.151202 CCGAAGCAACTCAAAGCCTAA 58.849 47.619 0.00 0.00 0.00 2.69
29 30 2.552315 CCGAAGCAACTCAAAGCCTAAA 59.448 45.455 0.00 0.00 0.00 1.85
30 31 3.004315 CCGAAGCAACTCAAAGCCTAAAA 59.996 43.478 0.00 0.00 0.00 1.52
31 32 4.321230 CCGAAGCAACTCAAAGCCTAAAAT 60.321 41.667 0.00 0.00 0.00 1.82
32 33 4.853743 CGAAGCAACTCAAAGCCTAAAATC 59.146 41.667 0.00 0.00 0.00 2.17
33 34 5.562696 CGAAGCAACTCAAAGCCTAAAATCA 60.563 40.000 0.00 0.00 0.00 2.57
34 35 5.382618 AGCAACTCAAAGCCTAAAATCAG 57.617 39.130 0.00 0.00 0.00 2.90
35 36 5.072741 AGCAACTCAAAGCCTAAAATCAGA 58.927 37.500 0.00 0.00 0.00 3.27
36 37 5.536161 AGCAACTCAAAGCCTAAAATCAGAA 59.464 36.000 0.00 0.00 0.00 3.02
37 38 6.210185 AGCAACTCAAAGCCTAAAATCAGAAT 59.790 34.615 0.00 0.00 0.00 2.40
38 39 6.529477 GCAACTCAAAGCCTAAAATCAGAATC 59.471 38.462 0.00 0.00 0.00 2.52
39 40 7.596494 CAACTCAAAGCCTAAAATCAGAATCA 58.404 34.615 0.00 0.00 0.00 2.57
40 41 7.388460 ACTCAAAGCCTAAAATCAGAATCAG 57.612 36.000 0.00 0.00 0.00 2.90
41 42 6.127786 ACTCAAAGCCTAAAATCAGAATCAGC 60.128 38.462 0.00 0.00 0.00 4.26
42 43 5.948162 TCAAAGCCTAAAATCAGAATCAGCT 59.052 36.000 0.00 0.00 0.00 4.24
43 44 5.831702 AAGCCTAAAATCAGAATCAGCTG 57.168 39.130 7.63 7.63 37.24 4.24
44 45 4.205587 AGCCTAAAATCAGAATCAGCTGG 58.794 43.478 15.13 0.00 36.55 4.85
45 46 3.950395 GCCTAAAATCAGAATCAGCTGGT 59.050 43.478 15.13 2.68 36.55 4.00
46 47 4.036144 GCCTAAAATCAGAATCAGCTGGTC 59.964 45.833 15.13 11.86 36.55 4.02
47 48 5.435291 CCTAAAATCAGAATCAGCTGGTCT 58.565 41.667 15.13 14.04 36.55 3.85
48 49 5.526846 CCTAAAATCAGAATCAGCTGGTCTC 59.473 44.000 15.13 7.43 36.55 3.36
49 50 3.557228 AATCAGAATCAGCTGGTCTCC 57.443 47.619 15.13 0.00 36.55 3.71
50 51 1.942776 TCAGAATCAGCTGGTCTCCA 58.057 50.000 15.13 3.50 36.55 3.86
51 52 1.552337 TCAGAATCAGCTGGTCTCCAC 59.448 52.381 15.13 0.00 36.55 4.02
52 53 1.554160 CAGAATCAGCTGGTCTCCACT 59.446 52.381 15.13 0.00 32.26 4.00
53 54 1.830477 AGAATCAGCTGGTCTCCACTC 59.170 52.381 15.13 0.00 0.00 3.51
54 55 1.830477 GAATCAGCTGGTCTCCACTCT 59.170 52.381 15.13 0.00 0.00 3.24
55 56 1.193323 ATCAGCTGGTCTCCACTCTG 58.807 55.000 15.13 6.85 33.26 3.35
56 57 1.079266 CAGCTGGTCTCCACTCTGC 60.079 63.158 5.57 0.00 0.00 4.26
57 58 1.534959 AGCTGGTCTCCACTCTGCA 60.535 57.895 0.00 0.00 0.00 4.41
58 59 1.079266 GCTGGTCTCCACTCTGCAG 60.079 63.158 7.63 7.63 0.00 4.41
59 60 1.079266 CTGGTCTCCACTCTGCAGC 60.079 63.158 9.47 0.00 0.00 5.25
60 61 1.824224 CTGGTCTCCACTCTGCAGCA 61.824 60.000 9.47 0.00 0.00 4.41
61 62 1.372683 GGTCTCCACTCTGCAGCAA 59.627 57.895 9.47 0.00 0.00 3.91
62 63 0.952984 GGTCTCCACTCTGCAGCAAC 60.953 60.000 9.47 0.00 0.00 4.17
63 64 0.034616 GTCTCCACTCTGCAGCAACT 59.965 55.000 9.47 0.00 0.00 3.16
64 65 1.273606 GTCTCCACTCTGCAGCAACTA 59.726 52.381 9.47 0.00 0.00 2.24
65 66 1.547820 TCTCCACTCTGCAGCAACTAG 59.452 52.381 9.47 2.99 0.00 2.57
66 67 1.274728 CTCCACTCTGCAGCAACTAGT 59.725 52.381 9.47 3.73 0.00 2.57
67 68 1.694150 TCCACTCTGCAGCAACTAGTT 59.306 47.619 9.47 1.12 0.00 2.24
68 69 2.072298 CCACTCTGCAGCAACTAGTTC 58.928 52.381 9.47 1.12 0.00 3.01
69 70 1.723542 CACTCTGCAGCAACTAGTTCG 59.276 52.381 9.47 3.03 0.00 3.95
70 71 1.613925 ACTCTGCAGCAACTAGTTCGA 59.386 47.619 9.47 0.00 0.00 3.71
71 72 2.232452 ACTCTGCAGCAACTAGTTCGAT 59.768 45.455 9.47 0.00 0.00 3.59
72 73 3.444034 ACTCTGCAGCAACTAGTTCGATA 59.556 43.478 9.47 0.00 0.00 2.92
73 74 4.033990 TCTGCAGCAACTAGTTCGATAG 57.966 45.455 9.47 1.53 0.00 2.08
93 94 9.186837 TCGATAGATAGGAGATTGGGTAATAAC 57.813 37.037 0.00 0.00 42.67 1.89
94 95 8.129840 CGATAGATAGGAGATTGGGTAATAACG 58.870 40.741 0.00 0.00 39.76 3.18
95 96 6.038997 AGATAGGAGATTGGGTAATAACGC 57.961 41.667 0.00 0.00 38.96 4.84
96 97 5.780793 AGATAGGAGATTGGGTAATAACGCT 59.219 40.000 0.00 0.00 39.24 5.07
97 98 4.772886 AGGAGATTGGGTAATAACGCTT 57.227 40.909 0.00 0.00 39.24 4.68
98 99 5.112129 AGGAGATTGGGTAATAACGCTTT 57.888 39.130 0.00 0.00 39.24 3.51
99 100 5.123936 AGGAGATTGGGTAATAACGCTTTC 58.876 41.667 0.00 0.00 39.24 2.62
100 101 4.879545 GGAGATTGGGTAATAACGCTTTCA 59.120 41.667 0.00 0.00 39.24 2.69
101 102 5.007724 GGAGATTGGGTAATAACGCTTTCAG 59.992 44.000 0.00 0.00 39.24 3.02
102 103 4.881850 AGATTGGGTAATAACGCTTTCAGG 59.118 41.667 0.00 0.00 39.24 3.86
103 104 2.993937 TGGGTAATAACGCTTTCAGGG 58.006 47.619 0.00 0.00 39.24 4.45
104 105 1.674441 GGGTAATAACGCTTTCAGGGC 59.326 52.381 0.00 0.00 35.73 5.19
105 106 2.640184 GGTAATAACGCTTTCAGGGCT 58.360 47.619 0.00 0.00 0.00 5.19
106 107 3.432608 GGGTAATAACGCTTTCAGGGCTA 60.433 47.826 0.00 0.00 35.73 3.93
107 108 4.386711 GGTAATAACGCTTTCAGGGCTAT 58.613 43.478 0.00 0.00 0.00 2.97
108 109 4.213482 GGTAATAACGCTTTCAGGGCTATG 59.787 45.833 0.00 0.00 0.00 2.23
109 110 1.663695 TAACGCTTTCAGGGCTATGC 58.336 50.000 0.00 0.00 0.00 3.14
110 111 3.017323 CGCTTTCAGGGCTATGCG 58.983 61.111 0.00 0.00 37.57 4.73
111 112 1.815421 CGCTTTCAGGGCTATGCGT 60.815 57.895 0.00 0.00 38.81 5.24
112 113 1.369091 CGCTTTCAGGGCTATGCGTT 61.369 55.000 0.00 0.00 38.81 4.84
113 114 0.811281 GCTTTCAGGGCTATGCGTTT 59.189 50.000 0.00 0.00 0.00 3.60
114 115 1.202348 GCTTTCAGGGCTATGCGTTTT 59.798 47.619 0.00 0.00 0.00 2.43
115 116 2.867429 CTTTCAGGGCTATGCGTTTTG 58.133 47.619 0.00 0.00 0.00 2.44
116 117 2.192664 TTCAGGGCTATGCGTTTTGA 57.807 45.000 0.00 0.00 0.00 2.69
117 118 2.418368 TCAGGGCTATGCGTTTTGAT 57.582 45.000 0.00 0.00 0.00 2.57
118 119 2.722094 TCAGGGCTATGCGTTTTGATT 58.278 42.857 0.00 0.00 0.00 2.57
119 120 2.682856 TCAGGGCTATGCGTTTTGATTC 59.317 45.455 0.00 0.00 0.00 2.52
120 121 2.024414 AGGGCTATGCGTTTTGATTCC 58.976 47.619 0.00 0.00 0.00 3.01
121 122 1.067060 GGGCTATGCGTTTTGATTCCC 59.933 52.381 0.00 0.00 0.00 3.97
122 123 1.268539 GGCTATGCGTTTTGATTCCCG 60.269 52.381 0.00 0.00 0.00 5.14
123 124 1.668751 GCTATGCGTTTTGATTCCCGA 59.331 47.619 0.00 0.00 0.00 5.14
124 125 2.538939 GCTATGCGTTTTGATTCCCGAC 60.539 50.000 0.00 0.00 0.00 4.79
125 126 1.821216 ATGCGTTTTGATTCCCGACT 58.179 45.000 0.00 0.00 0.00 4.18
126 127 0.871722 TGCGTTTTGATTCCCGACTG 59.128 50.000 0.00 0.00 0.00 3.51
127 128 0.872388 GCGTTTTGATTCCCGACTGT 59.128 50.000 0.00 0.00 0.00 3.55
128 129 1.399727 GCGTTTTGATTCCCGACTGTG 60.400 52.381 0.00 0.00 0.00 3.66
129 130 2.139917 CGTTTTGATTCCCGACTGTGA 58.860 47.619 0.00 0.00 0.00 3.58
130 131 2.157668 CGTTTTGATTCCCGACTGTGAG 59.842 50.000 0.00 0.00 0.00 3.51
131 132 3.139077 GTTTTGATTCCCGACTGTGAGT 58.861 45.455 0.00 0.00 0.00 3.41
132 133 4.312443 GTTTTGATTCCCGACTGTGAGTA 58.688 43.478 0.00 0.00 0.00 2.59
133 134 3.868757 TTGATTCCCGACTGTGAGTAG 57.131 47.619 0.00 0.00 0.00 2.57
134 135 1.476891 TGATTCCCGACTGTGAGTAGC 59.523 52.381 0.00 0.00 0.00 3.58
135 136 0.824759 ATTCCCGACTGTGAGTAGCC 59.175 55.000 0.00 0.00 0.00 3.93
136 137 0.541063 TTCCCGACTGTGAGTAGCCA 60.541 55.000 0.00 0.00 0.00 4.75
137 138 1.215647 CCCGACTGTGAGTAGCCAC 59.784 63.158 0.00 0.00 37.55 5.01
138 139 1.532604 CCCGACTGTGAGTAGCCACA 61.533 60.000 0.00 0.00 43.98 4.17
139 140 0.532573 CCGACTGTGAGTAGCCACAT 59.467 55.000 0.00 0.00 44.93 3.21
140 141 1.749063 CCGACTGTGAGTAGCCACATA 59.251 52.381 0.00 0.00 44.93 2.29
141 142 2.223595 CCGACTGTGAGTAGCCACATAG 60.224 54.545 0.00 0.00 44.93 2.23
142 143 2.683362 CGACTGTGAGTAGCCACATAGA 59.317 50.000 0.00 0.00 44.93 1.98
143 144 3.242903 CGACTGTGAGTAGCCACATAGAG 60.243 52.174 0.00 0.00 44.93 2.43
144 145 2.428890 ACTGTGAGTAGCCACATAGAGC 59.571 50.000 0.00 0.00 44.93 4.09
145 146 1.757118 TGTGAGTAGCCACATAGAGCC 59.243 52.381 0.00 0.00 41.63 4.70
146 147 1.032794 TGAGTAGCCACATAGAGCCG 58.967 55.000 0.00 0.00 0.00 5.52
147 148 0.319125 GAGTAGCCACATAGAGCCGC 60.319 60.000 0.00 0.00 0.00 6.53
148 149 1.043116 AGTAGCCACATAGAGCCGCA 61.043 55.000 0.00 0.00 0.00 5.69
149 150 0.876342 GTAGCCACATAGAGCCGCAC 60.876 60.000 0.00 0.00 0.00 5.34
150 151 2.028125 TAGCCACATAGAGCCGCACC 62.028 60.000 0.00 0.00 0.00 5.01
151 152 2.203070 CCACATAGAGCCGCACCC 60.203 66.667 0.00 0.00 0.00 4.61
152 153 2.586079 CACATAGAGCCGCACCCG 60.586 66.667 0.00 0.00 0.00 5.28
153 154 4.530857 ACATAGAGCCGCACCCGC 62.531 66.667 0.00 0.00 0.00 6.13
167 168 4.069232 CCGCGAGCTGGAACCTGA 62.069 66.667 8.23 0.00 0.00 3.86
168 169 2.507992 CGCGAGCTGGAACCTGAG 60.508 66.667 0.00 0.00 0.00 3.35
169 170 2.817396 GCGAGCTGGAACCTGAGC 60.817 66.667 0.00 0.00 35.28 4.26
170 171 2.125350 CGAGCTGGAACCTGAGCC 60.125 66.667 0.00 0.00 35.69 4.70
171 172 2.947532 CGAGCTGGAACCTGAGCCA 61.948 63.158 0.00 0.00 35.69 4.75
172 173 1.376553 GAGCTGGAACCTGAGCCAC 60.377 63.158 0.00 0.00 35.69 5.01
173 174 2.360475 GCTGGAACCTGAGCCACC 60.360 66.667 2.01 0.00 0.00 4.61
174 175 2.046892 CTGGAACCTGAGCCACCG 60.047 66.667 0.00 0.00 0.00 4.94
175 176 2.525629 TGGAACCTGAGCCACCGA 60.526 61.111 0.00 0.00 0.00 4.69
176 177 2.111999 CTGGAACCTGAGCCACCGAA 62.112 60.000 0.00 0.00 0.00 4.30
177 178 1.671379 GGAACCTGAGCCACCGAAC 60.671 63.158 0.00 0.00 0.00 3.95
178 179 1.671379 GAACCTGAGCCACCGAACC 60.671 63.158 0.00 0.00 0.00 3.62
179 180 3.192103 AACCTGAGCCACCGAACCC 62.192 63.158 0.00 0.00 0.00 4.11
183 184 3.948719 GAGCCACCGAACCCCACA 61.949 66.667 0.00 0.00 0.00 4.17
194 195 3.849951 CCCCACATAGCGAGGCGT 61.850 66.667 0.00 0.00 0.00 5.68
203 204 1.377366 TAGCGAGGCGTCAGGAAGAG 61.377 60.000 7.26 0.00 0.00 2.85
212 213 2.171840 CGTCAGGAAGAGAAAGGGAGA 58.828 52.381 0.00 0.00 0.00 3.71
447 448 4.394712 GCCGTGGAGGTGGAGGTG 62.395 72.222 0.00 0.00 43.70 4.00
448 449 3.706373 CCGTGGAGGTGGAGGTGG 61.706 72.222 0.00 0.00 34.51 4.61
449 450 2.603473 CGTGGAGGTGGAGGTGGA 60.603 66.667 0.00 0.00 0.00 4.02
450 451 2.650116 CGTGGAGGTGGAGGTGGAG 61.650 68.421 0.00 0.00 0.00 3.86
451 452 1.229209 GTGGAGGTGGAGGTGGAGA 60.229 63.158 0.00 0.00 0.00 3.71
452 453 1.229209 TGGAGGTGGAGGTGGAGAC 60.229 63.158 0.00 0.00 0.00 3.36
453 454 2.352032 GGAGGTGGAGGTGGAGACG 61.352 68.421 0.00 0.00 0.00 4.18
454 455 2.283966 AGGTGGAGGTGGAGACGG 60.284 66.667 0.00 0.00 0.00 4.79
567 596 3.053896 GGGCTGCGTGTGGGTTAC 61.054 66.667 0.00 0.00 0.00 2.50
568 597 2.281208 GGCTGCGTGTGGGTTACA 60.281 61.111 0.00 0.00 36.82 2.41
572 601 0.249699 CTGCGTGTGGGTTACAGTGA 60.250 55.000 0.00 0.00 40.69 3.41
640 669 0.661020 AACTGCTTTCCGTTTGGTCG 59.339 50.000 0.00 0.00 36.30 4.79
642 671 0.234884 CTGCTTTCCGTTTGGTCGTC 59.765 55.000 0.00 0.00 36.30 4.20
643 672 0.179067 TGCTTTCCGTTTGGTCGTCT 60.179 50.000 0.00 0.00 36.30 4.18
644 673 0.234884 GCTTTCCGTTTGGTCGTCTG 59.765 55.000 0.00 0.00 36.30 3.51
645 674 0.234884 CTTTCCGTTTGGTCGTCTGC 59.765 55.000 0.00 0.00 36.30 4.26
646 675 0.179067 TTTCCGTTTGGTCGTCTGCT 60.179 50.000 0.00 0.00 36.30 4.24
648 677 2.372690 CCGTTTGGTCGTCTGCTCG 61.373 63.158 0.00 0.00 0.00 5.03
685 720 0.248907 CGCCGTATGTGATTCGAGGT 60.249 55.000 0.00 0.00 0.00 3.85
711 746 3.800863 TCGTCGGCGAGTGAGCTC 61.801 66.667 8.66 6.82 42.81 4.09
713 748 2.461945 CGTCGGCGAGTGAGCTCTA 61.462 63.158 11.20 0.00 41.33 2.43
739 774 2.173382 GTGTTGTCGCGTGCCATC 59.827 61.111 5.77 1.87 0.00 3.51
755 790 1.406887 CCATCGAATCTGGACGGGTTT 60.407 52.381 0.00 0.00 35.70 3.27
756 791 2.356135 CATCGAATCTGGACGGGTTTT 58.644 47.619 0.00 0.00 0.00 2.43
771 837 1.219646 GTTTTTGCTGACCGTCCGTA 58.780 50.000 0.00 0.00 0.00 4.02
798 864 3.052082 CAGCAACCAGGCACTCGG 61.052 66.667 0.00 0.00 34.60 4.63
808 874 3.121030 GCACTCGGCAATGCGTCT 61.121 61.111 0.00 0.00 43.97 4.18
823 889 0.742281 CGTCTCTGTGAAGCCCCATG 60.742 60.000 0.00 0.00 0.00 3.66
845 911 2.050350 CCTGTTGGGCTGCTCCATG 61.050 63.158 10.07 0.00 36.58 3.66
856 922 0.991146 TGCTCCATGCTCCTTTACCA 59.009 50.000 0.00 0.00 43.37 3.25
861 927 0.034186 CATGCTCCTTTACCAGCCCA 60.034 55.000 0.00 0.00 34.47 5.36
862 928 0.257039 ATGCTCCTTTACCAGCCCAG 59.743 55.000 0.00 0.00 34.47 4.45
1536 1609 1.450312 CAAGGAGGCCGAGCGATTT 60.450 57.895 0.00 0.00 0.00 2.17
1549 1630 4.573201 CCGAGCGATTTGGAGGTAATTAAA 59.427 41.667 0.00 0.00 31.06 1.52
1554 1635 8.062065 AGCGATTTGGAGGTAATTAAATTTGA 57.938 30.769 0.00 0.00 0.00 2.69
1556 1637 7.222031 GCGATTTGGAGGTAATTAAATTTGACC 59.778 37.037 0.00 3.39 0.00 4.02
1605 1687 2.037251 TGAGGGCTTCTGTTACACAGTC 59.963 50.000 3.87 0.00 46.03 3.51
1632 1714 9.830975 ATTGTTATTTTTACCTTTCAAAGTGCT 57.169 25.926 0.00 0.00 0.00 4.40
1695 1777 7.098074 TCATTGCTATTATTGTGTGCATTCA 57.902 32.000 0.00 0.00 33.50 2.57
1696 1778 7.718525 TCATTGCTATTATTGTGTGCATTCAT 58.281 30.769 0.00 0.00 33.50 2.57
1697 1779 8.198778 TCATTGCTATTATTGTGTGCATTCATT 58.801 29.630 0.00 0.00 33.50 2.57
1698 1780 7.990541 TTGCTATTATTGTGTGCATTCATTC 57.009 32.000 0.00 0.00 33.50 2.67
1719 1801 7.921214 TCATTCTGTTTTATGGACTCGATAGAC 59.079 37.037 0.00 0.00 42.67 2.59
1828 1911 6.926826 TGGTATATACATTTGTTAGCAGGACG 59.073 38.462 14.70 0.00 0.00 4.79
1869 1952 4.958581 GCTCCTACCCTTGTTACCTAGTAA 59.041 45.833 0.00 0.00 0.00 2.24
1870 1953 5.068855 GCTCCTACCCTTGTTACCTAGTAAG 59.931 48.000 0.00 0.00 0.00 2.34
1871 1954 6.157862 TCCTACCCTTGTTACCTAGTAAGT 57.842 41.667 0.00 0.00 0.00 2.24
1872 1955 7.284014 TCCTACCCTTGTTACCTAGTAAGTA 57.716 40.000 0.00 0.00 0.00 2.24
1885 1968 1.020437 GTAAGTACTCCCTCCGTCCG 58.980 60.000 0.00 0.00 0.00 4.79
1886 1969 0.107017 TAAGTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
1887 1970 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
1892 1975 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1893 1976 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1894 1977 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
1895 1978 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1896 1979 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1897 1980 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1898 1981 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
1899 1982 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
1900 1983 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
1901 1984 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
1902 1985 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
1903 1986 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
1904 1987 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
1905 1988 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
1906 1989 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
1907 1990 6.035843 CCGGAAATACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
1909 1992 7.416664 CCGGAAATACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
1910 1993 8.620416 CGGAAATACTTGTCATCAAAATGGATA 58.380 33.333 0.00 0.00 33.42 2.59
1916 1999 8.421249 ACTTGTCATCAAAATGGATAAAAGGA 57.579 30.769 0.00 0.00 33.42 3.36
1920 2003 8.814931 TGTCATCAAAATGGATAAAAGGAATGT 58.185 29.630 0.00 0.00 33.42 2.71
1976 2059 9.918630 CTCTTTTTATCCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
1983 2066 7.773489 TCCATTTTGATGACAAGTATTTCCA 57.227 32.000 0.00 0.00 37.32 3.53
2093 2176 6.090783 GCCAAATAAGTTTGCTAGGTTGTAC 58.909 40.000 0.00 0.00 42.66 2.90
2094 2177 6.072119 GCCAAATAAGTTTGCTAGGTTGTACT 60.072 38.462 0.00 0.00 42.66 2.73
2095 2178 7.527457 CCAAATAAGTTTGCTAGGTTGTACTC 58.473 38.462 0.00 0.00 42.66 2.59
2096 2179 7.361799 CCAAATAAGTTTGCTAGGTTGTACTCC 60.362 40.741 0.00 0.00 42.66 3.85
2097 2180 3.697619 AGTTTGCTAGGTTGTACTCCC 57.302 47.619 0.00 0.00 0.00 4.30
2098 2181 3.248888 AGTTTGCTAGGTTGTACTCCCT 58.751 45.455 8.63 8.63 34.74 4.20
2099 2182 3.261137 AGTTTGCTAGGTTGTACTCCCTC 59.739 47.826 7.11 0.00 32.08 4.30
2100 2183 1.861982 TGCTAGGTTGTACTCCCTCC 58.138 55.000 7.11 2.40 32.08 4.30
2101 2184 0.745468 GCTAGGTTGTACTCCCTCCG 59.255 60.000 7.11 2.87 32.08 4.63
2102 2185 1.959028 GCTAGGTTGTACTCCCTCCGT 60.959 57.143 7.11 0.00 32.08 4.69
2103 2186 2.454538 CTAGGTTGTACTCCCTCCGTT 58.545 52.381 7.11 0.00 32.08 4.44
2104 2187 1.264295 AGGTTGTACTCCCTCCGTTC 58.736 55.000 0.00 0.00 0.00 3.95
2105 2188 0.248565 GGTTGTACTCCCTCCGTTCC 59.751 60.000 0.00 0.00 0.00 3.62
2106 2189 1.264295 GTTGTACTCCCTCCGTTCCT 58.736 55.000 0.00 0.00 0.00 3.36
2107 2190 2.450476 GTTGTACTCCCTCCGTTCCTA 58.550 52.381 0.00 0.00 0.00 2.94
2108 2191 2.827921 GTTGTACTCCCTCCGTTCCTAA 59.172 50.000 0.00 0.00 0.00 2.69
2109 2192 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
2110 2193 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
2111 2194 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
2112 2195 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
2113 2196 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
2114 2197 7.068702 TGTACTCCCTCCGTTCCTAAATATAA 58.931 38.462 0.00 0.00 0.00 0.98
2115 2198 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2116 2199 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2117 2200 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2118 2201 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2119 2202 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2120 2203 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2121 2204 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
2122 2205 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
2138 2221 8.879342 AAGTCTTTGTAGAGATTCGAATATGG 57.121 34.615 10.53 0.00 0.00 2.74
2139 2222 7.437748 AGTCTTTGTAGAGATTCGAATATGGG 58.562 38.462 10.53 0.00 0.00 4.00
2140 2223 6.146347 GTCTTTGTAGAGATTCGAATATGGGC 59.854 42.308 10.53 0.00 0.00 5.36
2141 2224 5.808366 TTGTAGAGATTCGAATATGGGCT 57.192 39.130 10.53 2.82 0.00 5.19
2142 2225 6.911250 TTGTAGAGATTCGAATATGGGCTA 57.089 37.500 10.53 2.96 0.00 3.93
2143 2226 6.268825 TGTAGAGATTCGAATATGGGCTAC 57.731 41.667 10.53 14.72 0.00 3.58
2144 2227 5.773176 TGTAGAGATTCGAATATGGGCTACA 59.227 40.000 20.28 20.28 34.91 2.74
2145 2228 5.140747 AGAGATTCGAATATGGGCTACAC 57.859 43.478 10.53 0.00 0.00 2.90
2146 2229 4.588951 AGAGATTCGAATATGGGCTACACA 59.411 41.667 10.53 0.00 0.00 3.72
2147 2230 4.632153 AGATTCGAATATGGGCTACACAC 58.368 43.478 11.38 0.00 0.00 3.82
2148 2231 2.502213 TCGAATATGGGCTACACACG 57.498 50.000 0.00 0.00 0.00 4.49
2149 2232 1.067974 TCGAATATGGGCTACACACGG 59.932 52.381 0.00 0.00 0.00 4.94
2150 2233 1.067974 CGAATATGGGCTACACACGGA 59.932 52.381 0.00 0.00 0.00 4.69
2151 2234 2.755650 GAATATGGGCTACACACGGAG 58.244 52.381 0.00 0.00 0.00 4.63
2152 2235 0.393077 ATATGGGCTACACACGGAGC 59.607 55.000 0.00 0.00 38.00 4.70
2153 2236 0.973496 TATGGGCTACACACGGAGCA 60.973 55.000 0.00 0.00 40.64 4.26
2154 2237 1.836999 ATGGGCTACACACGGAGCAA 61.837 55.000 0.00 0.00 40.64 3.91
2155 2238 1.302192 GGGCTACACACGGAGCAAA 60.302 57.895 0.00 0.00 40.64 3.68
2156 2239 0.887387 GGGCTACACACGGAGCAAAA 60.887 55.000 0.00 0.00 40.64 2.44
2157 2240 1.165270 GGCTACACACGGAGCAAAAT 58.835 50.000 0.00 0.00 40.64 1.82
2158 2241 1.135689 GGCTACACACGGAGCAAAATG 60.136 52.381 0.00 0.00 40.64 2.32
2159 2242 1.804151 GCTACACACGGAGCAAAATGA 59.196 47.619 0.00 0.00 38.62 2.57
2160 2243 2.159653 GCTACACACGGAGCAAAATGAG 60.160 50.000 0.00 0.00 38.62 2.90
2161 2244 1.967319 ACACACGGAGCAAAATGAGT 58.033 45.000 0.00 0.00 0.00 3.41
2162 2245 1.603802 ACACACGGAGCAAAATGAGTG 59.396 47.619 0.00 0.00 35.89 3.51
2163 2246 1.872952 CACACGGAGCAAAATGAGTGA 59.127 47.619 0.19 0.00 34.16 3.41
2164 2247 2.290367 CACACGGAGCAAAATGAGTGAA 59.710 45.455 0.19 0.00 34.16 3.18
2165 2248 3.058016 CACACGGAGCAAAATGAGTGAAT 60.058 43.478 0.19 0.00 34.16 2.57
2166 2249 3.189287 ACACGGAGCAAAATGAGTGAATC 59.811 43.478 0.19 0.00 34.16 2.52
2167 2250 3.438087 CACGGAGCAAAATGAGTGAATCT 59.562 43.478 0.00 0.00 0.00 2.40
2168 2251 4.631377 CACGGAGCAAAATGAGTGAATCTA 59.369 41.667 0.00 0.00 0.00 1.98
2169 2252 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2170 2253 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2171 2254 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2218 2301 6.821031 GGTACGTAGTCCATATTGAGATCT 57.179 41.667 0.00 0.00 43.93 2.75
2219 2302 6.844254 GGTACGTAGTCCATATTGAGATCTC 58.156 44.000 16.21 16.21 43.93 2.75
2220 2303 6.655848 GGTACGTAGTCCATATTGAGATCTCT 59.344 42.308 22.95 6.99 43.93 3.10
2221 2304 7.823310 GGTACGTAGTCCATATTGAGATCTCTA 59.177 40.741 22.95 16.42 43.93 2.43
2222 2305 9.217278 GTACGTAGTCCATATTGAGATCTCTAA 57.783 37.037 22.95 15.32 43.93 2.10
2223 2306 8.693120 ACGTAGTCCATATTGAGATCTCTAAA 57.307 34.615 22.95 10.81 29.74 1.85
2224 2307 9.132923 ACGTAGTCCATATTGAGATCTCTAAAA 57.867 33.333 22.95 10.10 29.74 1.52
2225 2308 9.967346 CGTAGTCCATATTGAGATCTCTAAAAA 57.033 33.333 22.95 9.74 0.00 1.94
2248 2331 8.515695 AAAAACTTATATTTAGGAACGGAGGG 57.484 34.615 0.00 0.00 0.00 4.30
2249 2332 7.441903 AAACTTATATTTAGGAACGGAGGGA 57.558 36.000 0.00 0.00 0.00 4.20
2250 2333 6.667558 ACTTATATTTAGGAACGGAGGGAG 57.332 41.667 0.00 0.00 0.00 4.30
2251 2334 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
2252 2335 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
2264 2347 4.102524 ACGGAGGGAGTAATTGCATAATGA 59.897 41.667 0.00 0.00 0.00 2.57
2289 2372 3.086282 TGCAGTTGATCATTGATGTGCT 58.914 40.909 3.32 0.00 0.00 4.40
2344 2427 3.825623 GGGAGGGGGATGGCAAGG 61.826 72.222 0.00 0.00 0.00 3.61
2345 2428 3.825623 GGAGGGGGATGGCAAGGG 61.826 72.222 0.00 0.00 0.00 3.95
2441 2525 3.446873 TCTTTCCATAAATTGCCATGCGT 59.553 39.130 0.00 0.00 0.00 5.24
2461 2545 3.303229 CGTTTTGTGAAGAAACTGGCAAC 59.697 43.478 0.00 0.00 35.40 4.17
2478 2562 4.043059 TGGCAACCCCATACAACTAAACTA 59.957 41.667 0.00 0.00 39.18 2.24
2507 2591 0.383949 AACGTTCGCAAATGCCAACT 59.616 45.000 12.77 0.00 39.47 3.16
2529 2613 2.718731 CCAGCGAACGTTTGCCAA 59.281 55.556 31.97 0.00 38.37 4.52
2548 2632 4.744631 GCCAAATATTGCGGTCCTAAATTG 59.255 41.667 6.15 0.00 0.00 2.32
2644 2728 3.785486 TCTTGTATCGGCTTGTGATCTG 58.215 45.455 0.00 0.00 0.00 2.90
2754 2847 3.305608 GCTTTATGCACTTTGCCAACTCT 60.306 43.478 0.00 0.00 44.23 3.24
3079 3247 6.716628 TCTCAAATATTTCATGGGCTATGGAC 59.283 38.462 11.16 0.00 37.39 4.02
3091 3259 1.138266 GCTATGGACGGGAAAGCACTA 59.862 52.381 0.00 0.00 33.38 2.74
3121 3289 6.824305 ATTGTTACAAATGAGGACAGAAGG 57.176 37.500 0.66 0.00 0.00 3.46
3335 3504 9.815936 CGGTTTATAACGTTAAATGTCTTTTCT 57.184 29.630 12.81 0.00 0.00 2.52
3376 3545 3.362706 TGCTTCTCGTACACCCTATCTT 58.637 45.455 0.00 0.00 0.00 2.40
3385 3554 8.509690 TCTCGTACACCCTATCTTTATTATTCG 58.490 37.037 0.00 0.00 0.00 3.34
3412 3581 3.139397 TGGTCCCCTGTTTGTTACTCATT 59.861 43.478 0.00 0.00 0.00 2.57
3545 3714 3.537580 TGGACGCCTGTATTTATTCACC 58.462 45.455 0.00 0.00 0.00 4.02
3654 3823 6.260936 GGTTTGTGCTATGCATCTACTATGTT 59.739 38.462 0.19 0.00 41.91 2.71
3682 3851 1.069090 TTGTCCGAGTGCACCTGTC 59.931 57.895 14.63 3.61 0.00 3.51
3683 3852 1.681486 TTGTCCGAGTGCACCTGTCA 61.681 55.000 14.63 4.26 0.00 3.58
3684 3853 1.664965 GTCCGAGTGCACCTGTCAC 60.665 63.158 14.63 0.21 34.80 3.67
3685 3854 2.734723 CCGAGTGCACCTGTCACG 60.735 66.667 14.63 9.79 39.31 4.35
3686 3855 2.335011 CGAGTGCACCTGTCACGA 59.665 61.111 14.63 0.00 39.31 4.35
3688 3857 0.874175 CGAGTGCACCTGTCACGAAA 60.874 55.000 14.63 0.00 39.31 3.46
3690 3859 1.668751 GAGTGCACCTGTCACGAAAAA 59.331 47.619 14.63 0.00 39.31 1.94
3691 3860 2.290641 GAGTGCACCTGTCACGAAAAAT 59.709 45.455 14.63 0.00 39.31 1.82
3692 3861 2.033299 AGTGCACCTGTCACGAAAAATG 59.967 45.455 14.63 0.00 39.31 2.32
3693 3862 2.020720 TGCACCTGTCACGAAAAATGT 58.979 42.857 0.00 0.00 0.00 2.71
3709 3988 7.379529 ACGAAAAATGTTGCTCTGAGTTAATTG 59.620 33.333 6.53 0.00 0.00 2.32
3710 3989 7.148918 CGAAAAATGTTGCTCTGAGTTAATTGG 60.149 37.037 6.53 0.00 0.00 3.16
3713 3992 4.072131 TGTTGCTCTGAGTTAATTGGGAC 58.928 43.478 6.53 0.00 0.00 4.46
3857 4136 3.206150 TGAGACAAGGCAGAAAACTCAC 58.794 45.455 0.00 0.00 0.00 3.51
3908 4187 9.178758 ACCTGAAAATATCCAAGTAAGTCAATC 57.821 33.333 0.00 0.00 0.00 2.67
3917 4196 7.421530 TCCAAGTAAGTCAATCTTCTTTTCG 57.578 36.000 0.00 0.00 37.56 3.46
4000 4286 1.377725 GTGATGGCCTCCCACACAG 60.378 63.158 3.32 0.00 45.77 3.66
4024 4311 2.593257 GTTACTCTTTCGGGAGTGACG 58.407 52.381 13.82 0.00 44.98 4.35
4067 4354 5.142061 TCACTAAATTTACTCAGTCCGCA 57.858 39.130 0.00 0.00 0.00 5.69
4298 4590 8.731591 AGATTTTATCTGGCCCAAATTATGAT 57.268 30.769 0.00 0.00 38.44 2.45
4354 4646 3.071457 TCACCTGTGGTATGCATATCTGG 59.929 47.826 17.67 19.11 32.11 3.86
4368 4660 1.531423 ATCTGGCTGCTGTTTGTCTG 58.469 50.000 0.00 0.00 0.00 3.51
4443 4735 2.913578 CTTTGCACAGCAGGGCCA 60.914 61.111 6.18 0.00 40.61 5.36
4454 4746 3.245264 ACAGCAGGGCCAAATTAGTTACT 60.245 43.478 6.18 0.00 0.00 2.24
4456 4748 4.947388 CAGCAGGGCCAAATTAGTTACTTA 59.053 41.667 6.18 0.00 0.00 2.24
4461 4753 7.284716 GCAGGGCCAAATTAGTTACTTATACTT 59.715 37.037 6.18 0.00 0.00 2.24
4511 4803 7.610305 ACCATCTTTCTTACGTATGGAAATGTT 59.390 33.333 16.24 4.60 39.60 2.71
4700 4992 8.723942 AGGTCTTCATTTATAAAGTAGCACAG 57.276 34.615 3.94 0.00 0.00 3.66
4714 5014 1.676529 AGCACAGCAGATGAATGATGC 59.323 47.619 0.00 0.00 40.22 3.91
4725 5025 7.591165 GCAGATGAATGATGCTACAAATGTAT 58.409 34.615 0.00 0.00 37.00 2.29
4876 5182 2.028420 TGCGAATTCAGTGCTATGCT 57.972 45.000 6.22 0.00 0.00 3.79
4891 5197 8.243426 CAGTGCTATGCTTTATTTCCTTTACAA 58.757 33.333 0.00 0.00 0.00 2.41
5002 5308 7.391620 TCGTTGTTTTCTGATATCTAAAGGGT 58.608 34.615 3.98 0.00 0.00 4.34
5063 5399 1.705002 TTGCCTGGCCGCCTATATGT 61.705 55.000 17.53 0.00 0.00 2.29
5067 5403 2.423577 CCTGGCCGCCTATATGTAAAC 58.576 52.381 11.61 0.00 0.00 2.01
5101 5437 3.425525 CACGATGTCGCTGTTATCCATAC 59.574 47.826 1.77 0.00 44.43 2.39
5244 5580 8.161425 ACCTTTTGCTCTATTGTCCTTAAGTTA 58.839 33.333 0.97 0.00 0.00 2.24
5311 5651 5.001232 GGAAGGTATTGCTTGTGAGTTGTA 58.999 41.667 0.00 0.00 0.00 2.41
5329 5669 6.180472 AGTTGTAGCACCTTAGCATTACATT 58.820 36.000 0.00 0.00 36.85 2.71
5380 5720 9.748708 TCTTATTTTGCCATCATGTAATTTAGC 57.251 29.630 0.00 0.00 0.00 3.09
5689 6029 6.978659 GTGAGTACTATGATGTTCCATCGAAA 59.021 38.462 0.00 0.00 0.00 3.46
5726 6066 6.177610 GTTCCACTCACCTTGGTATATTCAA 58.822 40.000 0.00 0.00 35.42 2.69
5912 6252 2.737252 GCGTCTTTACCTCCTGAAACAG 59.263 50.000 0.00 0.00 0.00 3.16
5983 6323 1.892209 ATTGACTTCCGTTGTCCCAC 58.108 50.000 0.00 0.00 33.83 4.61
6035 6382 6.096705 TGAGTTTGACTGATTTTGGTTCATGT 59.903 34.615 0.00 0.00 0.00 3.21
6056 6403 4.766373 TGTGAGCTTATGCCATCTTCAAAA 59.234 37.500 0.00 0.00 40.80 2.44
6057 6404 5.243507 TGTGAGCTTATGCCATCTTCAAAAA 59.756 36.000 0.00 0.00 40.80 1.94
6058 6405 5.574443 GTGAGCTTATGCCATCTTCAAAAAC 59.426 40.000 0.00 0.00 40.80 2.43
6059 6406 5.243507 TGAGCTTATGCCATCTTCAAAAACA 59.756 36.000 0.00 0.00 40.80 2.83
6060 6407 6.071221 TGAGCTTATGCCATCTTCAAAAACAT 60.071 34.615 0.00 0.00 40.80 2.71
6061 6408 6.103997 AGCTTATGCCATCTTCAAAAACATG 58.896 36.000 0.00 0.00 40.80 3.21
6062 6409 5.220529 GCTTATGCCATCTTCAAAAACATGC 60.221 40.000 0.00 0.00 0.00 4.06
6063 6410 3.042871 TGCCATCTTCAAAAACATGCC 57.957 42.857 0.00 0.00 0.00 4.40
6064 6411 2.633967 TGCCATCTTCAAAAACATGCCT 59.366 40.909 0.00 0.00 0.00 4.75
6097 6444 7.107639 TGCTTTTGCCTTTAGAGTTTTTACT 57.892 32.000 0.00 0.00 46.87 2.24
6101 6448 4.465886 TGCCTTTAGAGTTTTTACTGGCA 58.534 39.130 0.00 0.00 44.41 4.92
6139 6486 8.018537 ACTTAAAAATATATGGTTTCAGGGGC 57.981 34.615 7.64 0.00 0.00 5.80
6525 6872 3.068024 CCACAAAAGTAGGCAAAAGCTGA 59.932 43.478 0.00 0.00 0.00 4.26
6584 6931 6.349611 GGCAAATGCGATAATGATAATCCACT 60.350 38.462 0.00 0.00 43.26 4.00
6628 6975 3.665745 ATCTGCCAATCACAAACCAAC 57.334 42.857 0.00 0.00 0.00 3.77
6668 7015 5.656213 ACTTACGTGCAGAATAACCTAGT 57.344 39.130 0.00 0.00 0.00 2.57
6694 7041 1.243902 TTTTAAGCCCTTCCAGTGCG 58.756 50.000 0.00 0.00 0.00 5.34
6711 7058 3.560068 AGTGCGGTTTTCTTTGTCACTAG 59.440 43.478 0.00 0.00 32.29 2.57
6785 7132 8.537049 TTCAGGCAAATTAATGTTCTTGAATG 57.463 30.769 0.00 0.00 0.00 2.67
6869 7216 6.018262 GCTATTACCGCATCTATTGTTGTTCA 60.018 38.462 0.00 0.00 0.00 3.18
6911 7259 5.660460 ACCACAACTCACATTTTTCTTTCC 58.340 37.500 0.00 0.00 0.00 3.13
7001 7349 4.781775 TGAAGAGTTTGGGTTTCCTGTA 57.218 40.909 0.00 0.00 0.00 2.74
7151 7499 1.140312 TGCCTGGACCATTAGGATCC 58.860 55.000 2.48 2.48 38.69 3.36
7216 7564 4.103785 ACCTTCCAGCATTATAGTCTGCAT 59.896 41.667 0.00 0.00 40.88 3.96
7438 7787 3.921104 TCTGCTCTGATCCTCCAGTTAT 58.079 45.455 0.00 0.00 35.71 1.89
7542 7891 6.097696 TCCGTGAACTTACTCAATATGATCCA 59.902 38.462 0.00 0.00 0.00 3.41
7560 7909 1.407437 CCAGAGCGGCCTGTAATTCTT 60.407 52.381 0.00 0.00 32.43 2.52
7712 8061 7.647907 AATTGTTTCTCAAACTCAATGATGC 57.352 32.000 1.11 0.00 41.90 3.91
7804 8153 6.266786 TCGATTGGAGCTTATATGAGGTAACA 59.733 38.462 0.00 0.00 41.41 2.41
7805 8154 6.366332 CGATTGGAGCTTATATGAGGTAACAC 59.634 42.308 0.00 0.00 41.41 3.32
7884 8315 6.587226 GCACATTGATTGTAACACACATGATT 59.413 34.615 0.00 0.00 36.57 2.57
7907 8340 7.531280 TTGATTGATTCTCTCATCGACTTTC 57.469 36.000 0.00 0.00 32.72 2.62
7915 8348 4.464244 TCTCTCATCGACTTTCCAGATGTT 59.536 41.667 0.00 0.00 41.63 2.71
7921 8354 4.341487 TCGACTTTCCAGATGTTCTAGGA 58.659 43.478 0.00 0.00 0.00 2.94
7969 8402 0.678395 ATGAGATAGCTGCCCACTCG 59.322 55.000 0.00 0.00 0.00 4.18
8044 8477 7.990886 ACGGTTCTACCAATTGTATGATGTTAT 59.009 33.333 4.43 0.00 38.47 1.89
8074 8507 6.649973 GGATCATCTCAGTTGAACCATATCAG 59.350 42.308 7.08 0.00 36.39 2.90
8163 8598 1.546834 GAACACGCCGTCATCTACTC 58.453 55.000 0.00 0.00 0.00 2.59
8174 8609 3.873361 CGTCATCTACTCATTGGCACATT 59.127 43.478 0.00 0.00 39.30 2.71
8187 8622 9.520204 CTCATTGGCACATTAAGTTAAATTAGG 57.480 33.333 0.00 0.00 39.30 2.69
8197 8632 9.878599 CATTAAGTTAAATTAGGCCAAGATACG 57.121 33.333 5.01 0.00 0.00 3.06
8207 8642 5.165961 AGGCCAAGATACGCATATTGTAT 57.834 39.130 5.01 0.00 32.53 2.29
8231 8668 5.165961 TGGAAAGCTGATACTGCTAAACT 57.834 39.130 0.00 0.00 37.67 2.66
8232 8669 4.937620 TGGAAAGCTGATACTGCTAAACTG 59.062 41.667 0.00 0.00 37.67 3.16
8245 8682 3.388024 TGCTAAACTGGATGCTAGGTAGG 59.612 47.826 0.00 0.00 0.00 3.18
8246 8683 3.641906 GCTAAACTGGATGCTAGGTAGGA 59.358 47.826 0.00 0.00 0.00 2.94
8247 8684 4.262249 GCTAAACTGGATGCTAGGTAGGAG 60.262 50.000 0.00 0.00 0.00 3.69
8248 8685 3.406512 AACTGGATGCTAGGTAGGAGT 57.593 47.619 0.00 0.00 0.00 3.85
8249 8686 4.537945 AACTGGATGCTAGGTAGGAGTA 57.462 45.455 0.00 0.00 0.00 2.59
8250 8687 4.750833 ACTGGATGCTAGGTAGGAGTAT 57.249 45.455 0.00 0.00 0.00 2.12
8283 8720 1.030457 CTTCATGGCCTTGGAGATGC 58.970 55.000 20.19 0.00 0.00 3.91
8309 8749 3.329386 CTGCATAATAGGCGTGCACTAT 58.671 45.455 16.19 3.14 43.30 2.12
8332 8772 4.343814 TGACAGTGAGACCAGAACATACAA 59.656 41.667 0.00 0.00 0.00 2.41
8333 8773 4.632153 ACAGTGAGACCAGAACATACAAC 58.368 43.478 0.00 0.00 0.00 3.32
8372 8812 5.413499 CGCCAAATCAATCTTTCATCCTTT 58.587 37.500 0.00 0.00 0.00 3.11
8397 8837 5.632347 CACTGAAATTCAAATTCTCACAGCC 59.368 40.000 0.00 0.00 0.00 4.85
8432 8872 6.966021 TGTAGCAAAGTAAGGAATGAACAAC 58.034 36.000 0.00 0.00 0.00 3.32
8504 8944 9.864034 CATGTATACCATAAGTTTTTGTCGATC 57.136 33.333 0.00 0.00 30.71 3.69
8539 8979 2.871022 CGATGAGAAGCTGGAAAGATGG 59.129 50.000 0.00 0.00 0.00 3.51
8540 8980 3.681034 CGATGAGAAGCTGGAAAGATGGT 60.681 47.826 0.00 0.00 0.00 3.55
8541 8981 3.795688 TGAGAAGCTGGAAAGATGGTT 57.204 42.857 0.00 0.00 0.00 3.67
8542 8982 3.415212 TGAGAAGCTGGAAAGATGGTTG 58.585 45.455 0.00 0.00 0.00 3.77
8543 8983 2.751806 GAGAAGCTGGAAAGATGGTTGG 59.248 50.000 0.00 0.00 0.00 3.77
8544 8984 2.108952 AGAAGCTGGAAAGATGGTTGGT 59.891 45.455 0.00 0.00 0.00 3.67
8545 8985 3.330701 AGAAGCTGGAAAGATGGTTGGTA 59.669 43.478 0.00 0.00 0.00 3.25
8546 8986 3.806949 AGCTGGAAAGATGGTTGGTAA 57.193 42.857 0.00 0.00 0.00 2.85
8547 8987 3.421844 AGCTGGAAAGATGGTTGGTAAC 58.578 45.455 0.00 0.00 0.00 2.50
8548 8988 3.074538 AGCTGGAAAGATGGTTGGTAACT 59.925 43.478 0.00 0.00 37.61 2.24
8549 8989 3.191371 GCTGGAAAGATGGTTGGTAACTG 59.809 47.826 0.00 0.00 37.61 3.16
8550 8990 3.153919 TGGAAAGATGGTTGGTAACTGC 58.846 45.455 0.00 0.00 37.61 4.40
8551 8991 3.153919 GGAAAGATGGTTGGTAACTGCA 58.846 45.455 0.00 0.00 37.61 4.41
8552 8992 3.572255 GGAAAGATGGTTGGTAACTGCAA 59.428 43.478 0.00 0.00 37.61 4.08
8553 8993 4.321230 GGAAAGATGGTTGGTAACTGCAAG 60.321 45.833 0.00 0.00 42.29 4.01
8554 8994 2.162681 AGATGGTTGGTAACTGCAAGC 58.837 47.619 0.00 0.00 37.60 4.01
8555 8995 2.162681 GATGGTTGGTAACTGCAAGCT 58.837 47.619 0.00 0.00 37.60 3.74
8556 8996 2.065899 TGGTTGGTAACTGCAAGCTT 57.934 45.000 0.00 0.00 37.60 3.74
8557 8997 1.680735 TGGTTGGTAACTGCAAGCTTG 59.319 47.619 22.44 22.44 37.60 4.01
8569 9009 1.743996 CAAGCTTGCTTAGTCCCTCC 58.256 55.000 14.65 0.00 0.00 4.30
8570 9010 0.621082 AAGCTTGCTTAGTCCCTCCC 59.379 55.000 6.02 0.00 0.00 4.30
8571 9011 1.224870 GCTTGCTTAGTCCCTCCCC 59.775 63.158 0.00 0.00 0.00 4.81
8572 9012 1.915983 CTTGCTTAGTCCCTCCCCC 59.084 63.158 0.00 0.00 0.00 5.40
8618 9058 2.125633 GACTCGGGAGGCGAAACC 60.126 66.667 0.00 0.00 39.61 3.27
8619 9059 3.660732 GACTCGGGAGGCGAAACCC 62.661 68.421 0.00 0.00 40.58 4.11
8620 9060 3.391382 CTCGGGAGGCGAAACCCT 61.391 66.667 0.00 0.00 43.57 4.34
8621 9061 2.037687 TCGGGAGGCGAAACCCTA 59.962 61.111 0.00 0.00 43.57 3.53
8622 9062 2.017559 CTCGGGAGGCGAAACCCTAG 62.018 65.000 0.00 0.00 43.57 3.02
8623 9063 2.189784 GGGAGGCGAAACCCTAGC 59.810 66.667 0.00 0.00 42.56 3.42
8646 9086 3.093172 CCCAGGCTCCCCTCCTTC 61.093 72.222 0.00 0.00 40.33 3.46
8647 9087 3.093172 CCAGGCTCCCCTCCTTCC 61.093 72.222 0.00 0.00 40.33 3.46
8648 9088 3.093172 CAGGCTCCCCTCCTTCCC 61.093 72.222 0.00 0.00 40.33 3.97
8649 9089 4.439901 AGGCTCCCCTCCTTCCCC 62.440 72.222 0.00 0.00 36.46 4.81
8650 9090 4.439901 GGCTCCCCTCCTTCCCCT 62.440 72.222 0.00 0.00 0.00 4.79
8651 9091 2.770475 GCTCCCCTCCTTCCCCTC 60.770 72.222 0.00 0.00 0.00 4.30
8652 9092 2.040359 CTCCCCTCCTTCCCCTCC 60.040 72.222 0.00 0.00 0.00 4.30
8653 9093 3.707189 TCCCCTCCTTCCCCTCCC 61.707 72.222 0.00 0.00 0.00 4.30
8654 9094 3.711782 CCCCTCCTTCCCCTCCCT 61.712 72.222 0.00 0.00 0.00 4.20
8655 9095 2.040359 CCCTCCTTCCCCTCCCTC 60.040 72.222 0.00 0.00 0.00 4.30
8656 9096 2.040359 CCTCCTTCCCCTCCCTCC 60.040 72.222 0.00 0.00 0.00 4.30
8657 9097 2.040359 CTCCTTCCCCTCCCTCCC 60.040 72.222 0.00 0.00 0.00 4.30
8658 9098 3.707189 TCCTTCCCCTCCCTCCCC 61.707 72.222 0.00 0.00 0.00 4.81
8659 9099 3.711782 CCTTCCCCTCCCTCCCCT 61.712 72.222 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.179059 TGAGTTGCTTCGGTTCAGCA 60.179 50.000 0.00 0.00 45.73 4.41
2 3 0.944386 TTGAGTTGCTTCGGTTCAGC 59.056 50.000 0.00 0.00 37.82 4.26
3 4 2.603173 GCTTTGAGTTGCTTCGGTTCAG 60.603 50.000 0.00 0.00 0.00 3.02
4 5 1.333619 GCTTTGAGTTGCTTCGGTTCA 59.666 47.619 0.00 0.00 0.00 3.18
5 6 1.335051 GGCTTTGAGTTGCTTCGGTTC 60.335 52.381 0.00 0.00 0.00 3.62
6 7 0.668535 GGCTTTGAGTTGCTTCGGTT 59.331 50.000 0.00 0.00 0.00 4.44
7 8 0.179018 AGGCTTTGAGTTGCTTCGGT 60.179 50.000 0.00 0.00 0.00 4.69
8 9 1.808411 TAGGCTTTGAGTTGCTTCGG 58.192 50.000 0.00 0.00 0.00 4.30
9 10 3.896648 TTTAGGCTTTGAGTTGCTTCG 57.103 42.857 0.00 0.00 0.00 3.79
10 11 5.772521 TGATTTTAGGCTTTGAGTTGCTTC 58.227 37.500 0.00 0.00 0.00 3.86
11 12 5.536161 TCTGATTTTAGGCTTTGAGTTGCTT 59.464 36.000 0.00 0.00 0.00 3.91
12 13 5.072741 TCTGATTTTAGGCTTTGAGTTGCT 58.927 37.500 0.00 0.00 0.00 3.91
13 14 5.376854 TCTGATTTTAGGCTTTGAGTTGC 57.623 39.130 0.00 0.00 0.00 4.17
14 15 7.596494 TGATTCTGATTTTAGGCTTTGAGTTG 58.404 34.615 0.00 0.00 0.00 3.16
15 16 7.576477 GCTGATTCTGATTTTAGGCTTTGAGTT 60.576 37.037 0.00 0.00 0.00 3.01
16 17 6.127786 GCTGATTCTGATTTTAGGCTTTGAGT 60.128 38.462 0.00 0.00 0.00 3.41
17 18 6.095160 AGCTGATTCTGATTTTAGGCTTTGAG 59.905 38.462 0.00 0.00 0.00 3.02
18 19 5.948162 AGCTGATTCTGATTTTAGGCTTTGA 59.052 36.000 0.00 0.00 0.00 2.69
19 20 6.034591 CAGCTGATTCTGATTTTAGGCTTTG 58.965 40.000 8.42 0.00 36.19 2.77
20 21 5.126707 CCAGCTGATTCTGATTTTAGGCTTT 59.873 40.000 17.39 0.00 36.19 3.51
21 22 4.643784 CCAGCTGATTCTGATTTTAGGCTT 59.356 41.667 17.39 0.00 36.19 4.35
22 23 4.205587 CCAGCTGATTCTGATTTTAGGCT 58.794 43.478 17.39 0.00 36.19 4.58
23 24 3.950395 ACCAGCTGATTCTGATTTTAGGC 59.050 43.478 17.39 0.00 36.19 3.93
24 25 5.435291 AGACCAGCTGATTCTGATTTTAGG 58.565 41.667 17.39 0.00 36.19 2.69
25 26 5.526846 GGAGACCAGCTGATTCTGATTTTAG 59.473 44.000 17.39 0.00 36.19 1.85
26 27 5.045651 TGGAGACCAGCTGATTCTGATTTTA 60.046 40.000 17.39 0.00 36.19 1.52
27 28 4.263639 TGGAGACCAGCTGATTCTGATTTT 60.264 41.667 17.39 0.00 36.19 1.82
28 29 3.265221 TGGAGACCAGCTGATTCTGATTT 59.735 43.478 17.39 0.00 36.19 2.17
29 30 2.842496 TGGAGACCAGCTGATTCTGATT 59.158 45.455 17.39 0.00 36.19 2.57
30 31 2.170187 GTGGAGACCAGCTGATTCTGAT 59.830 50.000 17.39 0.00 36.19 2.90
31 32 1.552337 GTGGAGACCAGCTGATTCTGA 59.448 52.381 17.39 2.73 36.19 3.27
32 33 1.554160 AGTGGAGACCAGCTGATTCTG 59.446 52.381 17.39 0.00 32.34 3.02
33 34 1.830477 GAGTGGAGACCAGCTGATTCT 59.170 52.381 17.39 16.23 32.34 2.40
34 35 1.830477 AGAGTGGAGACCAGCTGATTC 59.170 52.381 17.39 11.28 32.34 2.52
35 36 1.554160 CAGAGTGGAGACCAGCTGATT 59.446 52.381 17.39 0.32 38.56 2.57
36 37 1.193323 CAGAGTGGAGACCAGCTGAT 58.807 55.000 17.39 0.00 38.56 2.90
37 38 1.539560 GCAGAGTGGAGACCAGCTGA 61.540 60.000 17.39 0.00 38.56 4.26
38 39 1.079266 GCAGAGTGGAGACCAGCTG 60.079 63.158 6.78 6.78 38.99 4.24
39 40 1.534959 TGCAGAGTGGAGACCAGCT 60.535 57.895 0.00 0.00 32.34 4.24
40 41 1.079266 CTGCAGAGTGGAGACCAGC 60.079 63.158 8.42 0.00 38.14 4.85
41 42 1.079266 GCTGCAGAGTGGAGACCAG 60.079 63.158 20.43 0.00 38.14 4.00
42 43 1.410050 TTGCTGCAGAGTGGAGACCA 61.410 55.000 20.43 0.00 38.14 4.02
43 44 0.952984 GTTGCTGCAGAGTGGAGACC 60.953 60.000 20.43 0.00 38.14 3.85
44 45 0.034616 AGTTGCTGCAGAGTGGAGAC 59.965 55.000 20.43 4.29 38.14 3.36
45 46 1.547820 CTAGTTGCTGCAGAGTGGAGA 59.452 52.381 20.43 0.00 38.14 3.71
46 47 1.274728 ACTAGTTGCTGCAGAGTGGAG 59.725 52.381 20.43 10.69 38.97 3.86
47 48 1.342074 ACTAGTTGCTGCAGAGTGGA 58.658 50.000 20.43 0.00 0.00 4.02
48 49 2.072298 GAACTAGTTGCTGCAGAGTGG 58.928 52.381 20.43 4.90 0.00 4.00
49 50 1.723542 CGAACTAGTTGCTGCAGAGTG 59.276 52.381 20.43 3.02 0.00 3.51
50 51 1.613925 TCGAACTAGTTGCTGCAGAGT 59.386 47.619 20.43 8.71 0.00 3.24
51 52 2.354109 TCGAACTAGTTGCTGCAGAG 57.646 50.000 20.43 7.96 0.00 3.35
52 53 3.694566 TCTATCGAACTAGTTGCTGCAGA 59.305 43.478 20.43 6.19 0.00 4.26
53 54 4.033990 TCTATCGAACTAGTTGCTGCAG 57.966 45.455 14.14 10.11 0.00 4.41
54 55 4.655762 ATCTATCGAACTAGTTGCTGCA 57.344 40.909 14.14 0.00 0.00 4.41
55 56 5.048643 TCCTATCTATCGAACTAGTTGCTGC 60.049 44.000 14.14 0.00 0.00 5.25
56 57 6.428465 TCTCCTATCTATCGAACTAGTTGCTG 59.572 42.308 14.14 2.77 0.00 4.41
57 58 6.535540 TCTCCTATCTATCGAACTAGTTGCT 58.464 40.000 14.14 0.00 0.00 3.91
58 59 6.804770 TCTCCTATCTATCGAACTAGTTGC 57.195 41.667 14.14 4.02 0.00 4.17
59 60 8.240682 CCAATCTCCTATCTATCGAACTAGTTG 58.759 40.741 14.14 5.81 0.00 3.16
60 61 7.394923 CCCAATCTCCTATCTATCGAACTAGTT 59.605 40.741 8.13 8.13 0.00 2.24
61 62 6.887545 CCCAATCTCCTATCTATCGAACTAGT 59.112 42.308 0.00 0.00 0.00 2.57
62 63 6.887545 ACCCAATCTCCTATCTATCGAACTAG 59.112 42.308 0.00 0.00 0.00 2.57
63 64 6.791371 ACCCAATCTCCTATCTATCGAACTA 58.209 40.000 0.00 0.00 0.00 2.24
64 65 5.646215 ACCCAATCTCCTATCTATCGAACT 58.354 41.667 0.00 0.00 0.00 3.01
65 66 5.986501 ACCCAATCTCCTATCTATCGAAC 57.013 43.478 0.00 0.00 0.00 3.95
66 67 9.763837 TTATTACCCAATCTCCTATCTATCGAA 57.236 33.333 0.00 0.00 0.00 3.71
67 68 9.186837 GTTATTACCCAATCTCCTATCTATCGA 57.813 37.037 0.00 0.00 0.00 3.59
68 69 8.129840 CGTTATTACCCAATCTCCTATCTATCG 58.870 40.741 0.00 0.00 0.00 2.92
69 70 7.921745 GCGTTATTACCCAATCTCCTATCTATC 59.078 40.741 0.00 0.00 0.00 2.08
70 71 7.620094 AGCGTTATTACCCAATCTCCTATCTAT 59.380 37.037 0.00 0.00 0.00 1.98
71 72 6.952358 AGCGTTATTACCCAATCTCCTATCTA 59.048 38.462 0.00 0.00 0.00 1.98
72 73 5.780793 AGCGTTATTACCCAATCTCCTATCT 59.219 40.000 0.00 0.00 0.00 1.98
73 74 6.038997 AGCGTTATTACCCAATCTCCTATC 57.961 41.667 0.00 0.00 0.00 2.08
74 75 6.435292 AAGCGTTATTACCCAATCTCCTAT 57.565 37.500 0.00 0.00 0.00 2.57
75 76 5.881923 AAGCGTTATTACCCAATCTCCTA 57.118 39.130 0.00 0.00 0.00 2.94
76 77 4.772886 AAGCGTTATTACCCAATCTCCT 57.227 40.909 0.00 0.00 0.00 3.69
77 78 4.879545 TGAAAGCGTTATTACCCAATCTCC 59.120 41.667 0.00 0.00 0.00 3.71
78 79 5.007724 CCTGAAAGCGTTATTACCCAATCTC 59.992 44.000 0.00 0.00 0.00 2.75
79 80 4.881850 CCTGAAAGCGTTATTACCCAATCT 59.118 41.667 0.00 0.00 0.00 2.40
80 81 4.036380 CCCTGAAAGCGTTATTACCCAATC 59.964 45.833 0.00 0.00 0.00 2.67
81 82 3.951680 CCCTGAAAGCGTTATTACCCAAT 59.048 43.478 0.00 0.00 0.00 3.16
82 83 3.349022 CCCTGAAAGCGTTATTACCCAA 58.651 45.455 0.00 0.00 0.00 4.12
83 84 2.942306 GCCCTGAAAGCGTTATTACCCA 60.942 50.000 0.00 0.00 0.00 4.51
84 85 1.674441 GCCCTGAAAGCGTTATTACCC 59.326 52.381 0.00 0.00 0.00 3.69
85 86 2.640184 AGCCCTGAAAGCGTTATTACC 58.360 47.619 0.00 0.00 34.64 2.85
86 87 4.319549 GCATAGCCCTGAAAGCGTTATTAC 60.320 45.833 0.00 0.00 34.64 1.89
87 88 3.813166 GCATAGCCCTGAAAGCGTTATTA 59.187 43.478 0.00 0.00 34.64 0.98
88 89 2.618709 GCATAGCCCTGAAAGCGTTATT 59.381 45.455 0.00 0.00 34.64 1.40
89 90 2.222027 GCATAGCCCTGAAAGCGTTAT 58.778 47.619 0.00 0.00 34.64 1.89
90 91 1.663695 GCATAGCCCTGAAAGCGTTA 58.336 50.000 0.00 0.00 34.64 3.18
91 92 1.369091 CGCATAGCCCTGAAAGCGTT 61.369 55.000 0.00 0.00 40.25 4.84
92 93 1.815421 CGCATAGCCCTGAAAGCGT 60.815 57.895 0.00 0.00 40.25 5.07
93 94 3.017323 CGCATAGCCCTGAAAGCG 58.983 61.111 0.00 0.00 39.17 4.68
94 95 0.811281 AAACGCATAGCCCTGAAAGC 59.189 50.000 0.00 0.00 0.00 3.51
95 96 2.487762 TCAAAACGCATAGCCCTGAAAG 59.512 45.455 0.00 0.00 0.00 2.62
96 97 2.509569 TCAAAACGCATAGCCCTGAAA 58.490 42.857 0.00 0.00 0.00 2.69
97 98 2.192664 TCAAAACGCATAGCCCTGAA 57.807 45.000 0.00 0.00 0.00 3.02
98 99 2.418368 ATCAAAACGCATAGCCCTGA 57.582 45.000 0.00 0.00 0.00 3.86
99 100 2.223572 GGAATCAAAACGCATAGCCCTG 60.224 50.000 0.00 0.00 0.00 4.45
100 101 2.024414 GGAATCAAAACGCATAGCCCT 58.976 47.619 0.00 0.00 0.00 5.19
101 102 1.067060 GGGAATCAAAACGCATAGCCC 59.933 52.381 0.00 0.00 0.00 5.19
102 103 1.268539 CGGGAATCAAAACGCATAGCC 60.269 52.381 0.00 0.00 0.00 3.93
103 104 1.668751 TCGGGAATCAAAACGCATAGC 59.331 47.619 0.00 0.00 0.00 2.97
104 105 2.936498 AGTCGGGAATCAAAACGCATAG 59.064 45.455 0.00 0.00 0.00 2.23
105 106 2.675844 CAGTCGGGAATCAAAACGCATA 59.324 45.455 0.00 0.00 0.00 3.14
106 107 1.468520 CAGTCGGGAATCAAAACGCAT 59.531 47.619 0.00 0.00 0.00 4.73
107 108 0.871722 CAGTCGGGAATCAAAACGCA 59.128 50.000 0.00 0.00 0.00 5.24
108 109 0.872388 ACAGTCGGGAATCAAAACGC 59.128 50.000 0.00 0.00 0.00 4.84
109 110 2.139917 TCACAGTCGGGAATCAAAACG 58.860 47.619 0.00 0.00 0.00 3.60
110 111 3.139077 ACTCACAGTCGGGAATCAAAAC 58.861 45.455 0.00 0.00 0.00 2.43
111 112 3.485463 ACTCACAGTCGGGAATCAAAA 57.515 42.857 0.00 0.00 0.00 2.44
112 113 3.616560 GCTACTCACAGTCGGGAATCAAA 60.617 47.826 0.00 0.00 0.00 2.69
113 114 2.094182 GCTACTCACAGTCGGGAATCAA 60.094 50.000 0.00 0.00 0.00 2.57
114 115 1.476891 GCTACTCACAGTCGGGAATCA 59.523 52.381 0.00 0.00 0.00 2.57
115 116 1.202428 GGCTACTCACAGTCGGGAATC 60.202 57.143 0.00 0.00 0.00 2.52
116 117 0.824759 GGCTACTCACAGTCGGGAAT 59.175 55.000 0.00 0.00 0.00 3.01
117 118 0.541063 TGGCTACTCACAGTCGGGAA 60.541 55.000 0.00 0.00 0.00 3.97
118 119 1.076014 TGGCTACTCACAGTCGGGA 59.924 57.895 0.00 0.00 0.00 5.14
119 120 1.215647 GTGGCTACTCACAGTCGGG 59.784 63.158 0.00 0.00 37.57 5.14
120 121 1.964448 TGTGGCTACTCACAGTCGG 59.036 57.895 0.64 0.00 42.05 4.79
126 127 1.269309 CGGCTCTATGTGGCTACTCAC 60.269 57.143 0.64 0.00 38.09 3.51
127 128 1.032794 CGGCTCTATGTGGCTACTCA 58.967 55.000 0.64 0.00 0.00 3.41
128 129 0.319125 GCGGCTCTATGTGGCTACTC 60.319 60.000 0.64 0.00 0.00 2.59
129 130 1.043116 TGCGGCTCTATGTGGCTACT 61.043 55.000 0.64 0.00 0.00 2.57
130 131 0.876342 GTGCGGCTCTATGTGGCTAC 60.876 60.000 0.00 0.00 0.00 3.58
131 132 1.441729 GTGCGGCTCTATGTGGCTA 59.558 57.895 0.00 0.00 0.00 3.93
132 133 2.187946 GTGCGGCTCTATGTGGCT 59.812 61.111 0.00 0.00 0.00 4.75
133 134 2.897350 GGTGCGGCTCTATGTGGC 60.897 66.667 0.00 0.00 0.00 5.01
134 135 2.203070 GGGTGCGGCTCTATGTGG 60.203 66.667 0.00 0.00 0.00 4.17
135 136 2.586079 CGGGTGCGGCTCTATGTG 60.586 66.667 0.00 0.00 0.00 3.21
136 137 4.530857 GCGGGTGCGGCTCTATGT 62.531 66.667 0.00 0.00 0.00 2.29
150 151 3.997064 CTCAGGTTCCAGCTCGCGG 62.997 68.421 6.13 0.00 0.00 6.46
151 152 2.507992 CTCAGGTTCCAGCTCGCG 60.508 66.667 0.00 0.00 0.00 5.87
152 153 2.817396 GCTCAGGTTCCAGCTCGC 60.817 66.667 0.00 0.00 32.48 5.03
153 154 2.125350 GGCTCAGGTTCCAGCTCG 60.125 66.667 0.00 0.00 35.82 5.03
154 155 1.376553 GTGGCTCAGGTTCCAGCTC 60.377 63.158 0.00 0.00 35.82 4.09
155 156 2.753029 GTGGCTCAGGTTCCAGCT 59.247 61.111 2.14 0.00 35.82 4.24
156 157 2.360475 GGTGGCTCAGGTTCCAGC 60.360 66.667 0.00 0.00 42.61 4.85
157 158 2.046892 CGGTGGCTCAGGTTCCAG 60.047 66.667 0.00 0.00 32.15 3.86
158 159 2.144078 TTCGGTGGCTCAGGTTCCA 61.144 57.895 0.00 0.00 0.00 3.53
159 160 1.671379 GTTCGGTGGCTCAGGTTCC 60.671 63.158 0.00 0.00 0.00 3.62
160 161 1.671379 GGTTCGGTGGCTCAGGTTC 60.671 63.158 0.00 0.00 0.00 3.62
161 162 2.430367 GGTTCGGTGGCTCAGGTT 59.570 61.111 0.00 0.00 0.00 3.50
162 163 3.637273 GGGTTCGGTGGCTCAGGT 61.637 66.667 0.00 0.00 0.00 4.00
163 164 4.410400 GGGGTTCGGTGGCTCAGG 62.410 72.222 0.00 0.00 0.00 3.86
164 165 3.636231 TGGGGTTCGGTGGCTCAG 61.636 66.667 0.00 0.00 0.00 3.35
165 166 3.948719 GTGGGGTTCGGTGGCTCA 61.949 66.667 0.00 0.00 0.00 4.26
166 167 1.906105 TATGTGGGGTTCGGTGGCTC 61.906 60.000 0.00 0.00 0.00 4.70
167 168 1.910580 CTATGTGGGGTTCGGTGGCT 61.911 60.000 0.00 0.00 0.00 4.75
168 169 1.451387 CTATGTGGGGTTCGGTGGC 60.451 63.158 0.00 0.00 0.00 5.01
169 170 1.451387 GCTATGTGGGGTTCGGTGG 60.451 63.158 0.00 0.00 0.00 4.61
170 171 1.813753 CGCTATGTGGGGTTCGGTG 60.814 63.158 0.00 0.00 0.00 4.94
171 172 1.956629 CTCGCTATGTGGGGTTCGGT 61.957 60.000 0.00 0.00 0.00 4.69
172 173 1.227263 CTCGCTATGTGGGGTTCGG 60.227 63.158 0.00 0.00 0.00 4.30
173 174 1.227263 CCTCGCTATGTGGGGTTCG 60.227 63.158 0.00 0.00 0.00 3.95
174 175 1.523938 GCCTCGCTATGTGGGGTTC 60.524 63.158 0.00 0.00 0.00 3.62
175 176 2.590092 GCCTCGCTATGTGGGGTT 59.410 61.111 0.00 0.00 0.00 4.11
176 177 3.849951 CGCCTCGCTATGTGGGGT 61.850 66.667 0.00 0.00 38.85 4.95
177 178 3.792053 GACGCCTCGCTATGTGGGG 62.792 68.421 0.00 0.00 46.44 4.96
178 179 2.279517 GACGCCTCGCTATGTGGG 60.280 66.667 0.00 0.00 0.00 4.61
179 180 1.589993 CTGACGCCTCGCTATGTGG 60.590 63.158 0.00 0.00 0.00 4.17
183 184 0.752009 TCTTCCTGACGCCTCGCTAT 60.752 55.000 0.00 0.00 0.00 2.97
194 195 2.183679 GCTCTCCCTTTCTCTTCCTGA 58.816 52.381 0.00 0.00 0.00 3.86
203 204 2.881352 CGCGTCGCTCTCCCTTTC 60.881 66.667 16.36 0.00 0.00 2.62
327 328 0.671251 CCCTCCGGAAGAAGATCTCG 59.329 60.000 5.23 0.00 0.00 4.04
453 454 4.209866 ATGAATCTGGCCGCCCCC 62.210 66.667 7.03 0.00 0.00 5.40
454 455 2.908940 CATGAATCTGGCCGCCCC 60.909 66.667 7.03 0.00 0.00 5.80
553 582 0.249699 TCACTGTAACCCACACGCAG 60.250 55.000 0.00 0.00 32.33 5.18
554 583 0.178301 TTCACTGTAACCCACACGCA 59.822 50.000 0.00 0.00 32.33 5.24
556 585 2.478894 GTCATTCACTGTAACCCACACG 59.521 50.000 0.00 0.00 32.33 4.49
558 587 2.549134 CCGTCATTCACTGTAACCCACA 60.549 50.000 0.00 0.00 35.30 4.17
560 589 1.002659 CCCGTCATTCACTGTAACCCA 59.997 52.381 0.00 0.00 0.00 4.51
567 596 2.040544 GCCCACCCGTCATTCACTG 61.041 63.158 0.00 0.00 0.00 3.66
568 597 2.351276 GCCCACCCGTCATTCACT 59.649 61.111 0.00 0.00 0.00 3.41
607 636 0.387239 GCAGTTTCCCACAATGACGC 60.387 55.000 0.00 0.00 0.00 5.19
631 660 1.213094 AACGAGCAGACGACCAAACG 61.213 55.000 5.12 0.00 37.03 3.60
640 669 2.027625 CGGTCCCAAACGAGCAGAC 61.028 63.158 0.00 0.00 0.00 3.51
642 671 2.742372 CCGGTCCCAAACGAGCAG 60.742 66.667 0.00 0.00 0.00 4.24
643 672 3.234630 CTCCGGTCCCAAACGAGCA 62.235 63.158 0.00 0.00 0.00 4.26
644 673 2.240162 ATCTCCGGTCCCAAACGAGC 62.240 60.000 0.00 0.00 0.00 5.03
645 674 0.460284 CATCTCCGGTCCCAAACGAG 60.460 60.000 0.00 0.00 0.00 4.18
646 675 1.594833 CATCTCCGGTCCCAAACGA 59.405 57.895 0.00 0.00 0.00 3.85
648 677 1.749258 GGCATCTCCGGTCCCAAAC 60.749 63.158 0.00 0.00 0.00 2.93
711 746 1.645034 CGACAACACTGGAGCCATAG 58.355 55.000 0.00 0.00 0.00 2.23
713 748 1.672356 GCGACAACACTGGAGCCAT 60.672 57.895 0.00 0.00 0.00 4.40
723 758 3.410516 CGATGGCACGCGACAACA 61.411 61.111 15.93 6.55 30.02 3.33
739 774 1.401018 GCAAAAACCCGTCCAGATTCG 60.401 52.381 0.00 0.00 0.00 3.34
755 790 0.319211 CACTACGGACGGTCAGCAAA 60.319 55.000 10.76 0.00 0.00 3.68
756 791 1.287815 CACTACGGACGGTCAGCAA 59.712 57.895 10.76 0.00 0.00 3.91
771 837 4.603535 GGTTGCTGGCCCACCACT 62.604 66.667 0.00 0.00 42.67 4.00
798 864 0.179205 GCTTCACAGAGACGCATTGC 60.179 55.000 0.00 0.00 40.92 3.56
801 867 1.078848 GGGCTTCACAGAGACGCAT 60.079 57.895 0.00 0.00 42.87 4.73
807 873 2.110967 CGCATGGGGCTTCACAGAG 61.111 63.158 0.89 0.00 41.67 3.35
808 874 2.046023 CGCATGGGGCTTCACAGA 60.046 61.111 0.89 0.00 41.67 3.41
839 905 1.673168 GCTGGTAAAGGAGCATGGAG 58.327 55.000 0.00 0.00 34.32 3.86
845 911 1.750780 GCTGGGCTGGTAAAGGAGC 60.751 63.158 0.00 0.00 34.23 4.70
856 922 3.790416 TTCGGTGCTTTGCTGGGCT 62.790 57.895 0.00 0.00 0.00 5.19
861 927 1.789078 CTGCTGTTCGGTGCTTTGCT 61.789 55.000 0.00 0.00 0.00 3.91
862 928 1.370900 CTGCTGTTCGGTGCTTTGC 60.371 57.895 0.00 0.00 0.00 3.68
1536 1609 6.723977 AGCAAGGTCAAATTTAATTACCTCCA 59.276 34.615 11.29 0.00 39.64 3.86
1549 1630 6.067217 ACTGGAATAGTAGCAAGGTCAAAT 57.933 37.500 0.00 0.00 38.04 2.32
1554 1635 3.097614 ACGACTGGAATAGTAGCAAGGT 58.902 45.455 0.00 0.00 40.53 3.50
1556 1637 4.602995 GAGACGACTGGAATAGTAGCAAG 58.397 47.826 0.00 0.00 40.53 4.01
1605 1687 9.862585 GCACTTTGAAAGGTAAAAATAACAATG 57.137 29.630 10.02 0.00 0.00 2.82
1632 1714 8.709499 TGTAAATAGCATTGAGCCATTGACACA 61.709 37.037 0.00 0.00 39.73 3.72
1689 1771 5.967674 CGAGTCCATAAAACAGAATGAATGC 59.032 40.000 0.00 0.00 39.69 3.56
1695 1777 7.923344 CAGTCTATCGAGTCCATAAAACAGAAT 59.077 37.037 0.00 0.00 0.00 2.40
1696 1778 7.122204 TCAGTCTATCGAGTCCATAAAACAGAA 59.878 37.037 0.00 0.00 0.00 3.02
1697 1779 6.602009 TCAGTCTATCGAGTCCATAAAACAGA 59.398 38.462 0.00 0.00 0.00 3.41
1698 1780 6.796426 TCAGTCTATCGAGTCCATAAAACAG 58.204 40.000 0.00 0.00 0.00 3.16
1719 1801 4.406972 TCACCAGGATATCAAACCTCTCAG 59.593 45.833 4.83 0.00 33.91 3.35
1821 1904 6.183309 AGTCAAGAAAATATTTCGTCCTGC 57.817 37.500 0.10 0.00 0.00 4.85
1828 1911 8.184848 GGTAGGAGCAAGTCAAGAAAATATTTC 58.815 37.037 0.10 0.00 0.00 2.17
1869 1952 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
1870 1953 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
1871 1954 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
1872 1955 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
1892 1975 9.880157 ATTCCTTTTATCCATTTTGATGACAAG 57.120 29.630 0.00 0.00 37.32 3.16
1893 1976 9.656040 CATTCCTTTTATCCATTTTGATGACAA 57.344 29.630 0.00 0.00 0.00 3.18
1894 1977 8.814931 ACATTCCTTTTATCCATTTTGATGACA 58.185 29.630 0.00 0.00 0.00 3.58
1950 2033 9.918630 ACTTGTCATCAAAATGGATAAAAAGAG 57.081 29.630 0.00 0.00 33.42 2.85
1957 2040 9.473007 TGGAAATACTTGTCATCAAAATGGATA 57.527 29.630 0.00 0.00 33.42 2.59
1958 2041 8.365060 TGGAAATACTTGTCATCAAAATGGAT 57.635 30.769 0.00 0.00 33.42 3.41
1959 2042 7.669304 TCTGGAAATACTTGTCATCAAAATGGA 59.331 33.333 0.00 0.00 33.42 3.41
1960 2043 7.756722 GTCTGGAAATACTTGTCATCAAAATGG 59.243 37.037 0.00 0.00 33.42 3.16
1961 2044 7.482743 CGTCTGGAAATACTTGTCATCAAAATG 59.517 37.037 0.00 0.00 32.87 2.32
1962 2045 7.362056 CCGTCTGGAAATACTTGTCATCAAAAT 60.362 37.037 0.00 0.00 37.49 1.82
1963 2046 6.072728 CCGTCTGGAAATACTTGTCATCAAAA 60.073 38.462 0.00 0.00 37.49 2.44
1964 2047 5.411361 CCGTCTGGAAATACTTGTCATCAAA 59.589 40.000 0.00 0.00 37.49 2.69
1965 2048 4.935205 CCGTCTGGAAATACTTGTCATCAA 59.065 41.667 0.00 0.00 37.49 2.57
1966 2049 4.221924 TCCGTCTGGAAATACTTGTCATCA 59.778 41.667 0.00 0.00 42.85 3.07
1967 2050 4.755411 TCCGTCTGGAAATACTTGTCATC 58.245 43.478 0.00 0.00 42.85 2.92
1968 2051 4.383118 CCTCCGTCTGGAAATACTTGTCAT 60.383 45.833 0.00 0.00 45.87 3.06
1969 2052 3.056107 CCTCCGTCTGGAAATACTTGTCA 60.056 47.826 0.00 0.00 45.87 3.58
1970 2053 3.522553 CCTCCGTCTGGAAATACTTGTC 58.477 50.000 0.00 0.00 45.87 3.18
1971 2054 2.236395 CCCTCCGTCTGGAAATACTTGT 59.764 50.000 0.00 0.00 45.87 3.16
1972 2055 2.500098 TCCCTCCGTCTGGAAATACTTG 59.500 50.000 0.00 0.00 45.87 3.16
1973 2056 2.766828 CTCCCTCCGTCTGGAAATACTT 59.233 50.000 0.00 0.00 45.87 2.24
1974 2057 2.292323 ACTCCCTCCGTCTGGAAATACT 60.292 50.000 0.00 0.00 45.87 2.12
1975 2058 2.108970 ACTCCCTCCGTCTGGAAATAC 58.891 52.381 0.00 0.00 45.87 1.89
1976 2059 2.544844 ACTCCCTCCGTCTGGAAATA 57.455 50.000 0.00 0.00 45.87 1.40
1977 2060 2.108970 GTACTCCCTCCGTCTGGAAAT 58.891 52.381 0.00 0.00 45.87 2.17
1978 2061 1.553706 GTACTCCCTCCGTCTGGAAA 58.446 55.000 0.00 0.00 45.87 3.13
1979 2062 0.324091 GGTACTCCCTCCGTCTGGAA 60.324 60.000 0.00 0.00 45.87 3.53
1980 2063 1.212934 AGGTACTCCCTCCGTCTGGA 61.213 60.000 0.00 0.00 40.71 3.86
1981 2064 0.324460 AAGGTACTCCCTCCGTCTGG 60.324 60.000 0.00 0.00 45.47 3.86
1982 2065 1.558233 AAAGGTACTCCCTCCGTCTG 58.442 55.000 0.00 0.00 45.47 3.51
1983 2066 2.322339 AAAAGGTACTCCCTCCGTCT 57.678 50.000 0.00 0.00 45.47 4.18
2093 2176 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2094 2177 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2095 2178 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2096 2179 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
2097 2180 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
2112 2195 9.967346 CCATATTCGAATCTCTACAAAGACTTA 57.033 33.333 15.25 0.00 0.00 2.24
2113 2196 7.928706 CCCATATTCGAATCTCTACAAAGACTT 59.071 37.037 15.25 0.00 0.00 3.01
2114 2197 7.437748 CCCATATTCGAATCTCTACAAAGACT 58.562 38.462 15.25 0.00 0.00 3.24
2115 2198 6.146347 GCCCATATTCGAATCTCTACAAAGAC 59.854 42.308 15.25 0.00 0.00 3.01
2116 2199 6.042093 AGCCCATATTCGAATCTCTACAAAGA 59.958 38.462 15.25 0.00 0.00 2.52
2117 2200 6.226787 AGCCCATATTCGAATCTCTACAAAG 58.773 40.000 15.25 0.00 0.00 2.77
2118 2201 6.174720 AGCCCATATTCGAATCTCTACAAA 57.825 37.500 15.25 0.00 0.00 2.83
2119 2202 5.808366 AGCCCATATTCGAATCTCTACAA 57.192 39.130 15.25 0.00 0.00 2.41
2120 2203 5.773176 TGTAGCCCATATTCGAATCTCTACA 59.227 40.000 15.25 19.22 33.68 2.74
2121 2204 6.094061 GTGTAGCCCATATTCGAATCTCTAC 58.906 44.000 15.25 17.28 0.00 2.59
2122 2205 5.773176 TGTGTAGCCCATATTCGAATCTCTA 59.227 40.000 15.25 7.19 0.00 2.43
2123 2206 4.588951 TGTGTAGCCCATATTCGAATCTCT 59.411 41.667 15.25 8.10 0.00 3.10
2124 2207 4.686554 GTGTGTAGCCCATATTCGAATCTC 59.313 45.833 15.25 0.76 0.00 2.75
2125 2208 4.632153 GTGTGTAGCCCATATTCGAATCT 58.368 43.478 15.25 7.71 0.00 2.40
2126 2209 3.428870 CGTGTGTAGCCCATATTCGAATC 59.571 47.826 15.25 0.00 0.00 2.52
2127 2210 3.390135 CGTGTGTAGCCCATATTCGAAT 58.610 45.455 16.15 16.15 0.00 3.34
2128 2211 2.482316 CCGTGTGTAGCCCATATTCGAA 60.482 50.000 0.00 0.00 0.00 3.71
2129 2212 1.067974 CCGTGTGTAGCCCATATTCGA 59.932 52.381 0.00 0.00 0.00 3.71
2130 2213 1.067974 TCCGTGTGTAGCCCATATTCG 59.932 52.381 0.00 0.00 0.00 3.34
2131 2214 2.755650 CTCCGTGTGTAGCCCATATTC 58.244 52.381 0.00 0.00 0.00 1.75
2132 2215 1.202651 GCTCCGTGTGTAGCCCATATT 60.203 52.381 0.00 0.00 32.40 1.28
2133 2216 0.393077 GCTCCGTGTGTAGCCCATAT 59.607 55.000 0.00 0.00 32.40 1.78
2134 2217 0.973496 TGCTCCGTGTGTAGCCCATA 60.973 55.000 0.00 0.00 37.97 2.74
2135 2218 1.836999 TTGCTCCGTGTGTAGCCCAT 61.837 55.000 0.00 0.00 37.97 4.00
2136 2219 2.046009 TTTGCTCCGTGTGTAGCCCA 62.046 55.000 0.00 0.00 37.97 5.36
2137 2220 0.887387 TTTTGCTCCGTGTGTAGCCC 60.887 55.000 0.00 0.00 37.97 5.19
2138 2221 1.135689 CATTTTGCTCCGTGTGTAGCC 60.136 52.381 0.00 0.00 37.97 3.93
2139 2222 1.804151 TCATTTTGCTCCGTGTGTAGC 59.196 47.619 0.00 0.00 39.25 3.58
2140 2223 3.067106 ACTCATTTTGCTCCGTGTGTAG 58.933 45.455 0.00 0.00 0.00 2.74
2141 2224 2.805671 CACTCATTTTGCTCCGTGTGTA 59.194 45.455 0.00 0.00 0.00 2.90
2142 2225 1.603802 CACTCATTTTGCTCCGTGTGT 59.396 47.619 0.00 0.00 0.00 3.72
2143 2226 1.872952 TCACTCATTTTGCTCCGTGTG 59.127 47.619 0.00 0.00 0.00 3.82
2144 2227 2.254546 TCACTCATTTTGCTCCGTGT 57.745 45.000 0.00 0.00 0.00 4.49
2145 2228 3.438087 AGATTCACTCATTTTGCTCCGTG 59.562 43.478 0.00 0.00 0.00 4.94
2146 2229 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2147 2230 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2148 2231 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2149 2232 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2179 2262 9.521503 GACTACGTACCGATGTATATAGACATA 57.478 37.037 12.82 0.00 40.18 2.29
2180 2263 7.493971 GGACTACGTACCGATGTATATAGACAT 59.506 40.741 12.70 12.70 42.82 3.06
2181 2264 6.813649 GGACTACGTACCGATGTATATAGACA 59.186 42.308 2.07 2.07 0.00 3.41
2182 2265 6.813649 TGGACTACGTACCGATGTATATAGAC 59.186 42.308 0.00 0.00 0.00 2.59
2183 2266 6.935167 TGGACTACGTACCGATGTATATAGA 58.065 40.000 0.00 0.00 0.00 1.98
2184 2267 7.783090 ATGGACTACGTACCGATGTATATAG 57.217 40.000 0.00 0.00 0.00 1.31
2185 2268 9.836864 AATATGGACTACGTACCGATGTATATA 57.163 33.333 0.00 0.00 0.00 0.86
2186 2269 8.618677 CAATATGGACTACGTACCGATGTATAT 58.381 37.037 0.00 0.00 0.00 0.86
2187 2270 7.823799 TCAATATGGACTACGTACCGATGTATA 59.176 37.037 0.00 0.00 0.00 1.47
2188 2271 6.656270 TCAATATGGACTACGTACCGATGTAT 59.344 38.462 0.00 0.00 0.00 2.29
2189 2272 5.997129 TCAATATGGACTACGTACCGATGTA 59.003 40.000 0.00 0.00 0.00 2.29
2190 2273 4.823442 TCAATATGGACTACGTACCGATGT 59.177 41.667 0.00 0.00 0.00 3.06
2191 2274 5.180680 TCTCAATATGGACTACGTACCGATG 59.819 44.000 0.00 0.00 0.00 3.84
2192 2275 5.311265 TCTCAATATGGACTACGTACCGAT 58.689 41.667 0.00 0.00 0.00 4.18
2193 2276 4.707105 TCTCAATATGGACTACGTACCGA 58.293 43.478 0.00 0.00 0.00 4.69
2194 2277 5.411977 AGATCTCAATATGGACTACGTACCG 59.588 44.000 0.00 0.00 0.00 4.02
2195 2278 6.655848 AGAGATCTCAATATGGACTACGTACC 59.344 42.308 24.39 0.00 0.00 3.34
2196 2279 7.675962 AGAGATCTCAATATGGACTACGTAC 57.324 40.000 24.39 0.00 0.00 3.67
2197 2280 9.788889 TTTAGAGATCTCAATATGGACTACGTA 57.211 33.333 24.39 0.00 0.00 3.57
2198 2281 8.693120 TTTAGAGATCTCAATATGGACTACGT 57.307 34.615 24.39 0.00 0.00 3.57
2199 2282 9.967346 TTTTTAGAGATCTCAATATGGACTACG 57.033 33.333 24.39 0.00 0.00 3.51
2223 2306 8.330993 TCCCTCCGTTCCTAAATATAAGTTTTT 58.669 33.333 0.00 0.00 0.00 1.94
2224 2307 7.864770 TCCCTCCGTTCCTAAATATAAGTTTT 58.135 34.615 0.00 0.00 0.00 2.43
2225 2308 7.126879 ACTCCCTCCGTTCCTAAATATAAGTTT 59.873 37.037 0.00 0.00 0.00 2.66
2226 2309 6.614496 ACTCCCTCCGTTCCTAAATATAAGTT 59.386 38.462 0.00 0.00 0.00 2.66
2227 2310 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2228 2311 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2229 2312 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
2230 2313 8.591072 CAATTACTCCCTCCGTTCCTAAATATA 58.409 37.037 0.00 0.00 0.00 0.86
2231 2314 7.450903 CAATTACTCCCTCCGTTCCTAAATAT 58.549 38.462 0.00 0.00 0.00 1.28
2232 2315 6.687139 GCAATTACTCCCTCCGTTCCTAAATA 60.687 42.308 0.00 0.00 0.00 1.40
2233 2316 5.681639 CAATTACTCCCTCCGTTCCTAAAT 58.318 41.667 0.00 0.00 0.00 1.40
2234 2317 4.624604 GCAATTACTCCCTCCGTTCCTAAA 60.625 45.833 0.00 0.00 0.00 1.85
2235 2318 3.118519 GCAATTACTCCCTCCGTTCCTAA 60.119 47.826 0.00 0.00 0.00 2.69
2236 2319 2.433239 GCAATTACTCCCTCCGTTCCTA 59.567 50.000 0.00 0.00 0.00 2.94
2237 2320 1.209747 GCAATTACTCCCTCCGTTCCT 59.790 52.381 0.00 0.00 0.00 3.36
2238 2321 1.065709 TGCAATTACTCCCTCCGTTCC 60.066 52.381 0.00 0.00 0.00 3.62
2239 2322 2.396590 TGCAATTACTCCCTCCGTTC 57.603 50.000 0.00 0.00 0.00 3.95
2240 2323 4.497291 TTATGCAATTACTCCCTCCGTT 57.503 40.909 0.00 0.00 0.00 4.44
2241 2324 4.102524 TCATTATGCAATTACTCCCTCCGT 59.897 41.667 0.00 0.00 0.00 4.69
2242 2325 4.641396 TCATTATGCAATTACTCCCTCCG 58.359 43.478 0.00 0.00 0.00 4.63
2243 2326 7.335422 CAGTATCATTATGCAATTACTCCCTCC 59.665 40.741 0.00 0.00 0.00 4.30
2244 2327 7.148340 GCAGTATCATTATGCAATTACTCCCTC 60.148 40.741 0.00 0.00 39.75 4.30
2245 2328 6.656693 GCAGTATCATTATGCAATTACTCCCT 59.343 38.462 0.00 0.00 39.75 4.20
2246 2329 6.430925 TGCAGTATCATTATGCAATTACTCCC 59.569 38.462 0.00 0.00 46.31 4.30
2247 2330 7.439157 TGCAGTATCATTATGCAATTACTCC 57.561 36.000 0.00 0.00 46.31 3.85
2264 2347 5.220989 GCACATCAATGATCAACTGCAGTAT 60.221 40.000 22.01 11.23 0.00 2.12
2301 2384 5.005779 GCTGACGTTCACCAGTTATCATTAG 59.994 44.000 4.18 0.00 33.19 1.73
2356 2440 2.065899 ACCAGCTAAAGTTGCCACAA 57.934 45.000 0.00 0.00 0.00 3.33
2357 2441 2.552155 CCTACCAGCTAAAGTTGCCACA 60.552 50.000 0.00 0.00 0.00 4.17
2415 2499 6.285990 GCATGGCAATTTATGGAAAGAAGAT 58.714 36.000 0.00 0.00 0.00 2.40
2441 2525 3.368948 GGGTTGCCAGTTTCTTCACAAAA 60.369 43.478 0.00 0.00 0.00 2.44
2461 2545 4.395959 TCGCTAGTTTAGTTGTATGGGG 57.604 45.455 0.00 0.00 0.00 4.96
2507 2591 1.301401 CAAACGTTCGCTGGGAGGA 60.301 57.895 0.00 0.00 0.00 3.71
2529 2613 6.039382 GGAGAACAATTTAGGACCGCAATATT 59.961 38.462 0.00 0.00 0.00 1.28
2548 2632 7.981789 TCAAGTACTATCATGATTGTGGAGAAC 59.018 37.037 26.55 18.11 0.00 3.01
2668 2761 2.945668 AGCCTTCGACTTGATATTTGGC 59.054 45.455 0.00 0.00 38.24 4.52
2754 2847 9.967346 GTATTTATGTCTGTATTCTCTAGTGCA 57.033 33.333 0.00 0.00 0.00 4.57
2820 2987 2.771763 CTTCGAGCGCCCACTTCAGT 62.772 60.000 2.29 0.00 0.00 3.41
3079 3247 6.920569 ACAATATAAACTAGTGCTTTCCCG 57.079 37.500 0.00 0.00 0.00 5.14
3121 3289 4.215109 ACAAATCCACCAACCTATATGGC 58.785 43.478 0.00 0.00 41.89 4.40
3335 3504 3.270027 CAGAACCTTTGAGTGTGTGTCA 58.730 45.455 0.00 0.00 0.00 3.58
3341 3510 3.471680 GAGAAGCAGAACCTTTGAGTGT 58.528 45.455 0.00 0.00 0.00 3.55
3545 3714 0.725686 CACCTTCTCTTGCAGCATCG 59.274 55.000 0.00 0.00 0.00 3.84
3654 3823 3.064207 GCACTCGGACAACTTTGACATA 58.936 45.455 0.00 0.00 0.00 2.29
3682 3851 4.214980 ACTCAGAGCAACATTTTTCGTG 57.785 40.909 0.00 0.00 0.00 4.35
3683 3852 4.900635 AACTCAGAGCAACATTTTTCGT 57.099 36.364 0.00 0.00 0.00 3.85
3684 3853 7.148918 CCAATTAACTCAGAGCAACATTTTTCG 60.149 37.037 0.00 0.00 0.00 3.46
3685 3854 7.116805 CCCAATTAACTCAGAGCAACATTTTTC 59.883 37.037 0.00 0.00 0.00 2.29
3686 3855 6.930722 CCCAATTAACTCAGAGCAACATTTTT 59.069 34.615 0.00 0.00 0.00 1.94
3688 3857 5.774690 TCCCAATTAACTCAGAGCAACATTT 59.225 36.000 0.00 0.00 0.00 2.32
3690 3859 4.702131 GTCCCAATTAACTCAGAGCAACAT 59.298 41.667 0.00 0.00 0.00 2.71
3691 3860 4.072131 GTCCCAATTAACTCAGAGCAACA 58.928 43.478 0.00 0.00 0.00 3.33
3692 3861 4.072131 TGTCCCAATTAACTCAGAGCAAC 58.928 43.478 0.00 0.00 0.00 4.17
3693 3862 4.365514 TGTCCCAATTAACTCAGAGCAA 57.634 40.909 0.00 0.00 0.00 3.91
3709 3988 0.307760 CGCACAAAGTCACTTGTCCC 59.692 55.000 0.00 0.00 37.43 4.46
3710 3989 0.307760 CCGCACAAAGTCACTTGTCC 59.692 55.000 0.00 0.00 37.43 4.02
3713 3992 1.299541 AGACCGCACAAAGTCACTTG 58.700 50.000 0.00 0.00 35.38 3.16
3743 4022 9.991906 AGACATTCTGAATTCAAACATCAAAAT 57.008 25.926 9.88 0.00 0.00 1.82
3995 4281 3.243771 CCCGAAAGAGTAACAGACTGTGT 60.244 47.826 9.33 2.37 43.24 3.72
4000 4286 3.255149 TCACTCCCGAAAGAGTAACAGAC 59.745 47.826 2.94 0.00 45.38 3.51
4024 4311 6.256321 AGTGAACAACAAAGATTTGCAATGTC 59.744 34.615 0.00 1.77 41.79 3.06
4067 4354 9.720874 TCAGATATCCAATTAGGCTATATGACT 57.279 33.333 0.00 0.00 40.13 3.41
4298 4590 6.428465 TGAAACGCATTGTTGAGGAATAGTAA 59.572 34.615 0.00 0.00 40.84 2.24
4354 4646 0.516439 GAGCTCAGACAAACAGCAGC 59.484 55.000 9.40 0.00 35.46 5.25
4368 4660 5.877012 TGTAGAAGGATGAAACAATGAGCTC 59.123 40.000 6.82 6.82 0.00 4.09
4478 4770 7.548075 CCATACGTAAGAAAGATGGTGTTACTT 59.452 37.037 0.00 0.00 43.62 2.24
4498 4790 6.385843 TGTCCAAAATCAACATTTCCATACG 58.614 36.000 0.00 0.00 30.37 3.06
4574 4866 3.356529 AGCCAACTCAGACAATTAGGG 57.643 47.619 0.00 0.00 0.00 3.53
4577 4869 7.394016 TGAGAAATAGCCAACTCAGACAATTA 58.606 34.615 0.00 0.00 35.01 1.40
4585 4877 7.423844 TTCTCTATGAGAAATAGCCAACTCA 57.576 36.000 7.46 0.00 44.37 3.41
4700 4992 5.828747 ACATTTGTAGCATCATTCATCTGC 58.171 37.500 0.00 0.00 36.15 4.26
4725 5025 9.231297 CTTCCAAGGATATGTTTTCTTCTACAA 57.769 33.333 0.00 0.00 0.00 2.41
4859 5165 6.634436 GGAAATAAAGCATAGCACTGAATTCG 59.366 38.462 0.04 0.00 0.00 3.34
4891 5197 2.372172 AGTTGCTAGCACTTAACCACCT 59.628 45.455 19.17 0.00 0.00 4.00
4982 5288 8.794335 AGTCAACCCTTTAGATATCAGAAAAC 57.206 34.615 5.32 0.15 0.00 2.43
5002 5308 9.851686 ATTAAATCAAGATACAGCCATAGTCAA 57.148 29.630 0.00 0.00 0.00 3.18
5087 5423 7.022055 TGGTTTAATTGTATGGATAACAGCG 57.978 36.000 0.00 0.00 0.00 5.18
5244 5580 9.835389 TGTAGTAACAGTTTAATAGTTGGTTGT 57.165 29.630 0.00 0.00 0.00 3.32
5329 5669 4.350368 TCCACAAAGATAGTTGACAGCA 57.650 40.909 0.00 0.00 32.59 4.41
5376 5716 7.857734 TGATTGATCCATTTTAGTTCGCTAA 57.142 32.000 0.00 0.00 37.87 3.09
5689 6029 1.489230 AGTGGAACCAAAACTCCGTCT 59.511 47.619 0.00 0.00 37.80 4.18
5726 6066 1.613836 CCCTCTTGCTTGTGCTTTCT 58.386 50.000 0.00 0.00 40.48 2.52
6035 6382 5.243507 TGTTTTTGAAGATGGCATAAGCTCA 59.756 36.000 0.00 0.00 41.70 4.26
6059 6406 1.856629 AAAGCAGGCATGTTAGGCAT 58.143 45.000 0.00 0.00 38.60 4.40
6060 6407 1.273048 CAAAAGCAGGCATGTTAGGCA 59.727 47.619 0.00 0.00 36.37 4.75
6061 6408 2.000429 CAAAAGCAGGCATGTTAGGC 58.000 50.000 0.00 0.00 0.00 3.93
6062 6409 1.404583 GGCAAAAGCAGGCATGTTAGG 60.405 52.381 0.00 0.00 0.00 2.69
6063 6410 1.547372 AGGCAAAAGCAGGCATGTTAG 59.453 47.619 0.00 0.00 0.00 2.34
6064 6411 1.631405 AGGCAAAAGCAGGCATGTTA 58.369 45.000 0.00 0.00 0.00 2.41
6097 6444 6.561737 TTTAAGTCAATACGAATGTTGCCA 57.438 33.333 0.00 0.00 0.00 4.92
6139 6486 0.748005 CCTTGCCATAACCTCCACCG 60.748 60.000 0.00 0.00 0.00 4.94
6525 6872 7.881643 TTGCATATTTTAGCGTTTGTTTGAT 57.118 28.000 0.00 0.00 0.00 2.57
6628 6975 0.319469 GTTTGAAATGTGTGGGCCGG 60.319 55.000 0.00 0.00 0.00 6.13
6687 7034 1.403679 TGACAAAGAAAACCGCACTGG 59.596 47.619 0.00 0.00 46.41 4.00
6761 7108 7.098477 CCATTCAAGAACATTAATTTGCCTGA 58.902 34.615 0.00 0.00 0.00 3.86
6785 7132 1.067354 CCATTCCAAGCTCAGCAAACC 60.067 52.381 0.00 0.00 0.00 3.27
6881 7228 8.641541 AGAAAAATGTGAGTTGTGGTAATGAAT 58.358 29.630 0.00 0.00 0.00 2.57
6897 7244 3.006859 GGGACCTGGGAAAGAAAAATGTG 59.993 47.826 0.00 0.00 0.00 3.21
6911 7259 1.355720 ACATCCAAGAAAGGGACCTGG 59.644 52.381 0.00 0.00 37.23 4.45
7001 7349 6.950041 TGATTGAAAGGAATTCTTCATGGTCT 59.050 34.615 10.06 0.00 38.92 3.85
7064 7412 1.247567 CAAACACAGCTGGGTAAGGG 58.752 55.000 24.69 8.45 0.00 3.95
7118 7466 1.141053 CCAGGCATAACTCTGTACCCC 59.859 57.143 0.00 0.00 0.00 4.95
7151 7499 2.356135 AGTTTGGCCAAGTATACTGCG 58.644 47.619 19.48 0.76 0.00 5.18
7216 7564 3.323775 AGGTTTTGACCTAGGAGTGGAA 58.676 45.455 17.98 0.49 38.58 3.53
7346 7694 7.933577 CCAAATGCAGATATAACTCAACCTCTA 59.066 37.037 0.00 0.00 0.00 2.43
7438 7787 7.981789 TGCAATAATTGGTTTAGTCAAACACAA 59.018 29.630 2.98 5.10 44.92 3.33
7542 7891 3.197983 AGTTAAGAATTACAGGCCGCTCT 59.802 43.478 0.00 0.00 0.00 4.09
7781 8130 7.171678 GTGTGTTACCTCATATAAGCTCCAATC 59.828 40.741 0.00 0.00 0.00 2.67
7795 8144 6.491383 AGTAGAATAGGAGTGTGTTACCTCA 58.509 40.000 0.00 0.00 35.52 3.86
7804 8153 8.431910 TTGGTAAGAAAGTAGAATAGGAGTGT 57.568 34.615 0.00 0.00 0.00 3.55
7805 8154 8.532819 ACTTGGTAAGAAAGTAGAATAGGAGTG 58.467 37.037 0.00 0.00 36.11 3.51
7848 8279 4.081862 ACAATCAATGTGCTTGGAATCTGG 60.082 41.667 0.00 0.00 41.93 3.86
7884 8315 6.045318 GGAAAGTCGATGAGAGAATCAATCA 58.955 40.000 0.00 0.00 42.53 2.57
7907 8340 7.446319 TGCATATGATTTTCCTAGAACATCTGG 59.554 37.037 6.97 0.00 0.00 3.86
7915 8348 9.453572 GGAATATGTGCATATGATTTTCCTAGA 57.546 33.333 6.97 0.00 34.45 2.43
7969 8402 5.803552 AGATCAGGCCATTTAAGATAGCTC 58.196 41.667 5.01 0.00 0.00 4.09
8015 8448 1.530323 ACAATTGGTAGAACCGTGGC 58.470 50.000 10.83 0.00 42.58 5.01
8044 8477 6.720309 TGGTTCAACTGAGATGATCCAATTA 58.280 36.000 17.02 0.00 41.42 1.40
8141 8576 0.821517 TAGATGACGGCGTGTTCCAT 59.178 50.000 21.19 15.13 0.00 3.41
8163 8598 7.224557 GGCCTAATTTAACTTAATGTGCCAATG 59.775 37.037 0.00 0.00 31.64 2.82
8174 8609 7.049133 TGCGTATCTTGGCCTAATTTAACTTA 58.951 34.615 3.32 0.00 0.00 2.24
8187 8622 6.761242 TCCATATACAATATGCGTATCTTGGC 59.239 38.462 14.37 0.00 35.12 4.52
8197 8632 9.388506 AGTATCAGCTTTCCATATACAATATGC 57.611 33.333 2.04 0.00 0.00 3.14
8207 8642 6.763135 CAGTTTAGCAGTATCAGCTTTCCATA 59.237 38.462 0.00 0.00 43.25 2.74
8224 8659 3.641906 TCCTACCTAGCATCCAGTTTAGC 59.358 47.826 0.00 0.00 0.00 3.09
8231 8668 3.578716 GCAATACTCCTACCTAGCATCCA 59.421 47.826 0.00 0.00 0.00 3.41
8232 8669 3.578716 TGCAATACTCCTACCTAGCATCC 59.421 47.826 0.00 0.00 0.00 3.51
8245 8682 6.408858 TGAAGAATCGAGTTTGCAATACTC 57.591 37.500 21.80 21.80 38.88 2.59
8246 8683 6.183360 CCATGAAGAATCGAGTTTGCAATACT 60.183 38.462 0.00 6.98 0.00 2.12
8247 8684 5.967674 CCATGAAGAATCGAGTTTGCAATAC 59.032 40.000 0.00 1.64 0.00 1.89
8248 8685 5.449041 GCCATGAAGAATCGAGTTTGCAATA 60.449 40.000 0.00 0.00 0.00 1.90
8249 8686 4.676196 GCCATGAAGAATCGAGTTTGCAAT 60.676 41.667 0.00 0.00 0.00 3.56
8250 8687 3.366273 GCCATGAAGAATCGAGTTTGCAA 60.366 43.478 0.00 0.00 0.00 4.08
8283 8720 1.262417 CACGCCTATTATGCAGCAGTG 59.738 52.381 0.00 0.00 0.00 3.66
8295 8735 1.757118 ACTGTCATAGTGCACGCCTAT 59.243 47.619 12.01 0.84 38.49 2.57
8309 8749 3.895041 TGTATGTTCTGGTCTCACTGTCA 59.105 43.478 0.00 0.00 0.00 3.58
8332 8772 1.153745 CGCTTCCGCTGCTAAGAGT 60.154 57.895 13.67 0.00 0.00 3.24
8333 8773 3.698382 CGCTTCCGCTGCTAAGAG 58.302 61.111 13.67 7.98 0.00 2.85
8359 8799 8.413309 TGAATTTCAGTGAAAGGATGAAAGAT 57.587 30.769 22.03 0.28 43.83 2.40
8372 8812 6.441274 GCTGTGAGAATTTGAATTTCAGTGA 58.559 36.000 0.00 0.00 0.00 3.41
8397 8837 3.262420 ACTTTGCTACAGGCGTTCATAG 58.738 45.455 0.00 0.00 45.43 2.23
8432 8872 4.093408 CCTGATTATCACACCAAGTTCACG 59.907 45.833 0.00 0.00 0.00 4.35
8504 8944 3.024547 TCTCATCGGTAGAAGTTCCCAG 58.975 50.000 0.00 0.00 0.00 4.45
8550 8990 1.680249 GGGAGGGACTAAGCAAGCTTG 60.680 57.143 22.44 22.44 41.55 4.01
8551 8991 0.621082 GGGAGGGACTAAGCAAGCTT 59.379 55.000 12.42 12.42 41.55 3.74
8552 8992 1.275421 GGGGAGGGACTAAGCAAGCT 61.275 60.000 0.00 0.00 41.55 3.74
8553 8993 1.224870 GGGGAGGGACTAAGCAAGC 59.775 63.158 0.00 0.00 41.55 4.01
8554 8994 1.915983 GGGGGAGGGACTAAGCAAG 59.084 63.158 0.00 0.00 41.55 4.01
8555 8995 4.164264 GGGGGAGGGACTAAGCAA 57.836 61.111 0.00 0.00 41.55 3.91
8606 9046 2.189784 GCTAGGGTTTCGCCTCCC 59.810 66.667 0.00 0.00 43.71 4.30
8607 9047 2.189784 GGCTAGGGTTTCGCCTCC 59.810 66.667 0.00 0.00 40.62 4.30
8608 9048 2.202892 CGGCTAGGGTTTCGCCTC 60.203 66.667 0.00 0.00 41.61 4.70
8609 9049 4.468689 GCGGCTAGGGTTTCGCCT 62.469 66.667 0.00 0.00 41.61 5.52
8629 9069 3.093172 GAAGGAGGGGAGCCTGGG 61.093 72.222 0.00 0.00 35.50 4.45
8630 9070 3.093172 GGAAGGAGGGGAGCCTGG 61.093 72.222 0.00 0.00 35.50 4.45
8631 9071 3.093172 GGGAAGGAGGGGAGCCTG 61.093 72.222 0.00 0.00 35.50 4.85
8632 9072 4.439901 GGGGAAGGAGGGGAGCCT 62.440 72.222 0.00 0.00 37.35 4.58
8633 9073 4.439901 AGGGGAAGGAGGGGAGCC 62.440 72.222 0.00 0.00 0.00 4.70
8634 9074 2.770475 GAGGGGAAGGAGGGGAGC 60.770 72.222 0.00 0.00 0.00 4.70
8635 9075 2.040359 GGAGGGGAAGGAGGGGAG 60.040 72.222 0.00 0.00 0.00 4.30
8636 9076 3.707189 GGGAGGGGAAGGAGGGGA 61.707 72.222 0.00 0.00 0.00 4.81
8637 9077 3.711782 AGGGAGGGGAAGGAGGGG 61.712 72.222 0.00 0.00 0.00 4.79
8638 9078 2.040359 GAGGGAGGGGAAGGAGGG 60.040 72.222 0.00 0.00 0.00 4.30
8639 9079 2.040359 GGAGGGAGGGGAAGGAGG 60.040 72.222 0.00 0.00 0.00 4.30
8640 9080 2.040359 GGGAGGGAGGGGAAGGAG 60.040 72.222 0.00 0.00 0.00 3.69
8641 9081 3.707189 GGGGAGGGAGGGGAAGGA 61.707 72.222 0.00 0.00 0.00 3.36
8642 9082 3.711782 AGGGGAGGGAGGGGAAGG 61.712 72.222 0.00 0.00 0.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.