Multiple sequence alignment - TraesCS5A01G234400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G234400 chr5A 100.000 7124 0 0 1 7124 450550631 450557754 0.000000e+00 13156.0
1 TraesCS5A01G234400 chr5A 90.141 284 19 6 1920 2196 295072950 295073231 1.890000e-95 361.0
2 TraesCS5A01G234400 chr5B 95.334 3515 127 19 2018 5505 410849420 410852924 0.000000e+00 5548.0
3 TraesCS5A01G234400 chr5B 94.135 1023 48 4 757 1770 410847835 410848854 0.000000e+00 1546.0
4 TraesCS5A01G234400 chr5B 91.369 869 36 18 5635 6491 410853168 410854009 0.000000e+00 1153.0
5 TraesCS5A01G234400 chr5B 93.893 262 10 3 1771 2026 410849136 410849397 2.410000e-104 390.0
6 TraesCS5A01G234400 chr5B 91.176 204 18 0 2014 2217 383254307 383254510 1.960000e-70 278.0
7 TraesCS5A01G234400 chr5D 93.203 2560 122 22 2214 4736 350226366 350228910 0.000000e+00 3716.0
8 TraesCS5A01G234400 chr5D 92.824 1742 101 19 4735 6460 350229153 350230886 0.000000e+00 2503.0
9 TraesCS5A01G234400 chr5D 93.197 1029 40 6 757 1770 350224946 350225959 0.000000e+00 1485.0
10 TraesCS5A01G234400 chr5D 94.702 151 8 0 1771 1921 350226232 350226382 1.190000e-57 235.0
11 TraesCS5A01G234400 chr5D 83.721 129 12 7 6990 7112 350231335 350231460 5.840000e-21 113.0
12 TraesCS5A01G234400 chr5D 95.918 49 2 0 6533 6581 350230961 350231009 5.920000e-11 80.5
13 TraesCS5A01G234400 chr2B 93.939 264 16 0 6572 6835 723031949 723031686 4.000000e-107 399.0
14 TraesCS5A01G234400 chr2B 90.397 302 24 2 1920 2217 373757718 373757418 6.700000e-105 392.0
15 TraesCS5A01G234400 chr2B 90.541 296 23 3 1920 2213 168620764 168620472 3.120000e-103 387.0
16 TraesCS5A01G234400 chr2B 92.366 262 20 0 6574 6835 742453554 742453293 2.430000e-99 374.0
17 TraesCS5A01G234400 chr2B 79.762 168 22 9 470 625 648488437 648488604 2.100000e-20 111.0
18 TraesCS5A01G234400 chr3A 93.333 270 16 2 6575 6844 19055594 19055327 1.440000e-106 398.0
19 TraesCS5A01G234400 chr2D 91.468 293 20 4 1924 2215 117838918 117838630 1.440000e-106 398.0
20 TraesCS5A01G234400 chr6A 93.561 264 15 2 6574 6835 58802543 58802806 6.700000e-105 392.0
21 TraesCS5A01G234400 chr2A 92.565 269 19 1 6569 6836 46848018 46848286 1.120000e-102 385.0
22 TraesCS5A01G234400 chr2A 91.450 269 20 3 6569 6835 131853578 131853845 4.060000e-97 366.0
23 TraesCS5A01G234400 chr7D 91.791 268 21 1 6570 6837 474532438 474532172 8.730000e-99 372.0
24 TraesCS5A01G234400 chr7D 74.068 644 99 46 36 637 34370813 34370196 1.210000e-47 202.0
25 TraesCS5A01G234400 chr7D 77.016 248 47 8 317 561 602686394 602686154 4.480000e-27 134.0
26 TraesCS5A01G234400 chr1D 91.760 267 22 0 6569 6835 426024968 426025234 8.730000e-99 372.0
27 TraesCS5A01G234400 chr1D 80.080 251 40 9 388 631 263196827 263197074 2.040000e-40 178.0
28 TraesCS5A01G234400 chr1D 83.851 161 15 9 1923 2076 212719966 212720122 7.450000e-30 143.0
29 TraesCS5A01G234400 chr4A 91.450 269 23 0 6568 6836 46310187 46310455 3.140000e-98 370.0
30 TraesCS5A01G234400 chr4A 90.141 213 17 3 2018 2226 98753778 98753566 2.530000e-69 274.0
31 TraesCS5A01G234400 chr3D 95.500 200 9 0 2018 2217 266414865 266415064 3.210000e-83 320.0
32 TraesCS5A01G234400 chr1B 95.455 198 9 0 2018 2215 271895238 271895041 4.150000e-82 316.0
33 TraesCS5A01G234400 chr1B 79.377 257 44 8 330 577 597158530 597158274 9.500000e-39 172.0
34 TraesCS5A01G234400 chr1B 78.073 301 44 11 1922 2219 32200540 32200259 3.420000e-38 171.0
35 TraesCS5A01G234400 chr7B 95.000 200 10 0 2018 2217 401548025 401548224 1.490000e-81 315.0
36 TraesCS5A01G234400 chr7B 81.034 290 40 13 347 627 511093216 511092933 4.330000e-52 217.0
37 TraesCS5A01G234400 chr7B 87.500 64 7 1 3774 3837 152467999 152467937 9.910000e-09 73.1
38 TraesCS5A01G234400 chr4B 84.407 295 46 0 1921 2215 38595115 38595409 2.510000e-74 291.0
39 TraesCS5A01G234400 chr3B 76.697 545 83 25 6 514 458191677 458191141 5.480000e-66 263.0
40 TraesCS5A01G234400 chr3B 87.692 130 14 2 1897 2026 685828329 685828456 4.450000e-32 150.0
41 TraesCS5A01G234400 chr3B 76.654 257 38 18 381 623 703122881 703123129 9.700000e-24 122.0
42 TraesCS5A01G234400 chr7A 80.333 300 52 7 330 624 710972098 710972395 3.350000e-53 220.0
43 TraesCS5A01G234400 chr7A 87.500 64 7 1 3774 3837 187460436 187460498 9.910000e-09 73.1
44 TraesCS5A01G234400 chr6D 95.000 40 2 0 330 369 293732170 293732209 5.970000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G234400 chr5A 450550631 450557754 7123 False 13156.000000 13156 100.000000 1 7124 1 chr5A.!!$F2 7123
1 TraesCS5A01G234400 chr5B 410847835 410854009 6174 False 2159.250000 5548 93.682750 757 6491 4 chr5B.!!$F2 5734
2 TraesCS5A01G234400 chr5D 350224946 350231460 6514 False 1355.416667 3716 92.260833 757 7112 6 chr5D.!!$F1 6355
3 TraesCS5A01G234400 chr7D 34370196 34370813 617 True 202.000000 202 74.068000 36 637 1 chr7D.!!$R1 601
4 TraesCS5A01G234400 chr3B 458191141 458191677 536 True 263.000000 263 76.697000 6 514 1 chr3B.!!$R1 508

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
742 768 0.034337 TTAGAACACTCCCGTGCACC 59.966 55.000 12.15 0.0 45.10 5.01 F
1512 1551 0.378257 ATTGCTTTACTGGCGCATCG 59.622 50.000 10.83 0.0 33.15 3.84 F
1741 1783 0.419865 TTGGTATCCTCCCAGTCCCA 59.580 55.000 0.00 0.0 32.49 4.37 F
1742 1784 0.647738 TGGTATCCTCCCAGTCCCAT 59.352 55.000 0.00 0.0 0.00 4.00 F
3578 3949 0.108377 TGCACCGTGGTATGTAGCTG 60.108 55.000 0.00 0.0 0.00 4.24 F
5162 5813 1.387084 GTTTCTGAGTTGACTAGCGCG 59.613 52.381 0.00 0.0 0.00 6.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1964 2294 2.247699 TGGGTTTCAGCTCTAGCCTA 57.752 50.000 0.00 0.0 43.38 3.93 R
3033 3396 0.522626 CAGCATGCAACGGTGATGAA 59.477 50.000 21.98 0.0 33.82 2.57 R
3514 3885 1.929230 TGCTTTTGACGACGAGTTCA 58.071 45.000 0.00 0.0 0.00 3.18 R
3883 4263 4.391216 TGTGAGCTCGTGTAGTCTAGTTAC 59.609 45.833 9.64 0.0 0.00 2.50 R
5445 6098 0.588252 ACTGCGTGCATTTCTCACAC 59.412 50.000 0.00 0.0 34.27 3.82 R
7015 8020 0.035317 TGCATCTTGCTTCTGACCGT 59.965 50.000 0.75 0.0 45.31 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 126 9.852091 CTCTTCTCTATTTTTCCATTCCTTTTG 57.148 33.333 0.00 0.00 0.00 2.44
109 127 8.306761 TCTTCTCTATTTTTCCATTCCTTTTGC 58.693 33.333 0.00 0.00 0.00 3.68
110 128 7.537596 TCTCTATTTTTCCATTCCTTTTGCA 57.462 32.000 0.00 0.00 0.00 4.08
117 140 7.878547 TTTTCCATTCCTTTTGCATTTTTCT 57.121 28.000 0.00 0.00 0.00 2.52
125 148 8.962857 TTCCTTTTGCATTTTTCTTTTGTTTC 57.037 26.923 0.00 0.00 0.00 2.78
158 181 8.225603 TCTATTTTCAGTTTTCTTTGCTCTGT 57.774 30.769 0.00 0.00 0.00 3.41
228 254 7.829378 AATACACGTCTAACATTTCTTCTCC 57.171 36.000 0.00 0.00 0.00 3.71
229 255 5.209818 ACACGTCTAACATTTCTTCTCCA 57.790 39.130 0.00 0.00 0.00 3.86
237 263 9.750125 GTCTAACATTTCTTCTCCATTTTTGTT 57.250 29.630 0.00 0.00 0.00 2.83
267 293 9.710979 TCTTATGTTTGTCTTTGTTTTTACTCG 57.289 29.630 0.00 0.00 0.00 4.18
268 294 8.844441 TTATGTTTGTCTTTGTTTTTACTCGG 57.156 30.769 0.00 0.00 0.00 4.63
270 296 4.966965 TTGTCTTTGTTTTTACTCGGCA 57.033 36.364 0.00 0.00 0.00 5.69
279 305 6.243811 TGTTTTTACTCGGCATTTTCGTAT 57.756 33.333 0.00 0.00 0.00 3.06
281 307 7.457868 TGTTTTTACTCGGCATTTTCGTATAG 58.542 34.615 0.00 0.00 0.00 1.31
282 308 7.118101 TGTTTTTACTCGGCATTTTCGTATAGT 59.882 33.333 0.00 0.00 0.00 2.12
292 318 7.408921 CGGCATTTTCGTATAGTTCAAAAACAC 60.409 37.037 0.00 0.00 37.88 3.32
293 319 7.408921 GGCATTTTCGTATAGTTCAAAAACACG 60.409 37.037 0.00 0.00 37.88 4.49
294 320 7.112426 GCATTTTCGTATAGTTCAAAAACACGT 59.888 33.333 0.00 0.00 37.88 4.49
295 321 8.949953 CATTTTCGTATAGTTCAAAAACACGTT 58.050 29.630 0.00 0.00 37.88 3.99
296 322 8.892887 TTTTCGTATAGTTCAAAAACACGTTT 57.107 26.923 0.00 0.00 37.88 3.60
297 323 8.892887 TTTCGTATAGTTCAAAAACACGTTTT 57.107 26.923 2.06 2.06 43.88 2.43
313 339 9.790389 AAACACGTTTTTAATAAGTGATCAACA 57.210 25.926 0.00 0.00 36.71 3.33
314 340 9.959749 AACACGTTTTTAATAAGTGATCAACAT 57.040 25.926 0.00 0.00 36.71 2.71
315 341 9.607285 ACACGTTTTTAATAAGTGATCAACATC 57.393 29.630 0.00 0.00 36.71 3.06
316 342 9.825972 CACGTTTTTAATAAGTGATCAACATCT 57.174 29.630 0.00 0.00 35.03 2.90
325 351 8.797350 ATAAGTGATCAACATCTCAACATTGA 57.203 30.769 0.00 0.00 35.64 2.57
326 352 6.492007 AGTGATCAACATCTCAACATTGAC 57.508 37.500 0.00 0.00 34.08 3.18
327 353 5.413833 AGTGATCAACATCTCAACATTGACC 59.586 40.000 0.00 0.00 34.08 4.02
328 354 4.392754 TGATCAACATCTCAACATTGACCG 59.607 41.667 0.00 0.00 34.08 4.79
329 355 4.001618 TCAACATCTCAACATTGACCGA 57.998 40.909 0.00 0.00 32.90 4.69
330 356 4.384940 TCAACATCTCAACATTGACCGAA 58.615 39.130 0.00 0.00 32.90 4.30
331 357 5.003160 TCAACATCTCAACATTGACCGAAT 58.997 37.500 0.00 0.00 32.90 3.34
332 358 4.952262 ACATCTCAACATTGACCGAATG 57.048 40.909 0.00 0.00 46.20 2.67
333 359 3.127548 ACATCTCAACATTGACCGAATGC 59.872 43.478 0.00 0.00 44.85 3.56
334 360 3.057969 TCTCAACATTGACCGAATGCT 57.942 42.857 0.00 0.00 44.85 3.79
335 361 3.411446 TCTCAACATTGACCGAATGCTT 58.589 40.909 0.00 0.00 44.85 3.91
336 362 4.574892 TCTCAACATTGACCGAATGCTTA 58.425 39.130 0.00 0.00 44.85 3.09
337 363 5.185454 TCTCAACATTGACCGAATGCTTAT 58.815 37.500 0.00 0.00 44.85 1.73
338 364 5.647658 TCTCAACATTGACCGAATGCTTATT 59.352 36.000 0.00 0.00 44.85 1.40
339 365 5.879237 TCAACATTGACCGAATGCTTATTC 58.121 37.500 0.00 0.00 44.85 1.75
340 366 5.414144 TCAACATTGACCGAATGCTTATTCA 59.586 36.000 0.00 0.00 44.85 2.57
341 367 5.895636 ACATTGACCGAATGCTTATTCAA 57.104 34.783 0.00 0.00 44.85 2.69
342 368 5.640732 ACATTGACCGAATGCTTATTCAAC 58.359 37.500 0.00 0.00 44.85 3.18
343 369 4.695217 TTGACCGAATGCTTATTCAACC 57.305 40.909 0.00 0.00 0.00 3.77
344 370 3.950397 TGACCGAATGCTTATTCAACCT 58.050 40.909 0.00 0.00 0.00 3.50
345 371 4.331968 TGACCGAATGCTTATTCAACCTT 58.668 39.130 0.00 0.00 0.00 3.50
346 372 4.764823 TGACCGAATGCTTATTCAACCTTT 59.235 37.500 0.00 0.00 0.00 3.11
347 373 5.242838 TGACCGAATGCTTATTCAACCTTTT 59.757 36.000 0.00 0.00 0.00 2.27
348 374 6.096673 ACCGAATGCTTATTCAACCTTTTT 57.903 33.333 0.00 0.00 0.00 1.94
375 401 8.519492 AAATACTTGTTCAACATTTCCGAATG 57.481 30.769 0.00 0.00 46.47 2.67
376 402 4.298332 ACTTGTTCAACATTTCCGAATGC 58.702 39.130 0.00 0.00 45.25 3.56
377 403 3.998099 TGTTCAACATTTCCGAATGCA 57.002 38.095 0.00 0.00 45.25 3.96
378 404 3.637432 TGTTCAACATTTCCGAATGCAC 58.363 40.909 0.00 0.00 45.25 4.57
379 405 2.610219 TCAACATTTCCGAATGCACG 57.390 45.000 0.00 0.00 45.25 5.34
380 406 1.876799 TCAACATTTCCGAATGCACGT 59.123 42.857 0.00 0.00 45.25 4.49
381 407 2.292016 TCAACATTTCCGAATGCACGTT 59.708 40.909 0.00 0.00 45.25 3.99
382 408 2.611974 ACATTTCCGAATGCACGTTC 57.388 45.000 0.00 0.00 45.25 3.95
383 409 1.876799 ACATTTCCGAATGCACGTTCA 59.123 42.857 0.00 0.00 45.25 3.18
384 410 2.292016 ACATTTCCGAATGCACGTTCAA 59.708 40.909 0.00 0.00 45.25 2.69
385 411 2.392933 TTTCCGAATGCACGTTCAAC 57.607 45.000 0.00 0.00 0.00 3.18
386 412 1.300481 TTCCGAATGCACGTTCAACA 58.700 45.000 0.00 0.00 0.00 3.33
387 413 1.518325 TCCGAATGCACGTTCAACAT 58.482 45.000 0.00 0.00 0.00 2.71
388 414 1.876799 TCCGAATGCACGTTCAACATT 59.123 42.857 0.00 0.00 36.74 2.71
389 415 2.292016 TCCGAATGCACGTTCAACATTT 59.708 40.909 0.00 0.00 34.28 2.32
390 416 3.049206 CCGAATGCACGTTCAACATTTT 58.951 40.909 0.00 0.00 34.28 1.82
391 417 3.489047 CCGAATGCACGTTCAACATTTTT 59.511 39.130 0.00 0.00 34.28 1.94
465 491 9.520204 ACTTGTTCAACATTTCAAATACTTCTG 57.480 29.630 0.00 0.00 0.00 3.02
466 492 7.928908 TGTTCAACATTTCAAATACTTCTGC 57.071 32.000 0.00 0.00 0.00 4.26
467 493 7.487484 TGTTCAACATTTCAAATACTTCTGCA 58.513 30.769 0.00 0.00 0.00 4.41
468 494 7.978414 TGTTCAACATTTCAAATACTTCTGCAA 59.022 29.630 0.00 0.00 0.00 4.08
469 495 7.928908 TCAACATTTCAAATACTTCTGCAAC 57.071 32.000 0.00 0.00 0.00 4.17
470 496 7.487484 TCAACATTTCAAATACTTCTGCAACA 58.513 30.769 0.00 0.00 0.00 3.33
471 497 8.143193 TCAACATTTCAAATACTTCTGCAACAT 58.857 29.630 0.00 0.00 0.00 2.71
472 498 8.767085 CAACATTTCAAATACTTCTGCAACATT 58.233 29.630 0.00 0.00 0.00 2.71
473 499 8.891671 ACATTTCAAATACTTCTGCAACATTT 57.108 26.923 0.00 0.00 0.00 2.32
474 500 9.328845 ACATTTCAAATACTTCTGCAACATTTT 57.671 25.926 0.00 0.00 0.00 1.82
477 503 8.939201 TTCAAATACTTCTGCAACATTTTTGA 57.061 26.923 0.00 0.00 0.00 2.69
478 504 8.578308 TCAAATACTTCTGCAACATTTTTGAG 57.422 30.769 0.00 0.00 0.00 3.02
479 505 8.196771 TCAAATACTTCTGCAACATTTTTGAGT 58.803 29.630 0.00 0.00 0.00 3.41
480 506 9.462174 CAAATACTTCTGCAACATTTTTGAGTA 57.538 29.630 0.00 0.00 0.00 2.59
481 507 9.463443 AAATACTTCTGCAACATTTTTGAGTAC 57.537 29.630 0.00 0.00 0.00 2.73
482 508 6.699575 ACTTCTGCAACATTTTTGAGTACT 57.300 33.333 0.00 0.00 0.00 2.73
483 509 7.100458 ACTTCTGCAACATTTTTGAGTACTT 57.900 32.000 0.00 0.00 0.00 2.24
484 510 6.974622 ACTTCTGCAACATTTTTGAGTACTTG 59.025 34.615 0.00 0.00 0.00 3.16
485 511 5.280945 TCTGCAACATTTTTGAGTACTTGC 58.719 37.500 0.00 0.00 34.45 4.01
486 512 5.067674 TCTGCAACATTTTTGAGTACTTGCT 59.932 36.000 10.70 0.00 34.84 3.91
487 513 5.280945 TGCAACATTTTTGAGTACTTGCTC 58.719 37.500 10.70 0.00 34.84 4.26
488 514 5.163571 TGCAACATTTTTGAGTACTTGCTCA 60.164 36.000 10.70 0.00 43.03 4.26
505 531 8.728088 ACTTGCTCAACATTTTTAAATACTCG 57.272 30.769 0.00 0.00 0.00 4.18
506 532 8.349983 ACTTGCTCAACATTTTTAAATACTCGT 58.650 29.630 0.00 0.00 0.00 4.18
507 533 9.180678 CTTGCTCAACATTTTTAAATACTCGTT 57.819 29.630 0.00 0.00 0.00 3.85
508 534 8.722342 TGCTCAACATTTTTAAATACTCGTTC 57.278 30.769 0.00 0.00 0.00 3.95
509 535 8.346300 TGCTCAACATTTTTAAATACTCGTTCA 58.654 29.630 0.00 0.00 0.00 3.18
510 536 9.176181 GCTCAACATTTTTAAATACTCGTTCAA 57.824 29.630 0.00 0.00 0.00 2.69
690 716 9.490379 CCATATAGGTCTACCAAAAATGTCTAC 57.510 37.037 1.26 0.00 38.89 2.59
691 717 9.490379 CATATAGGTCTACCAAAAATGTCTACC 57.510 37.037 1.26 0.00 38.89 3.18
692 718 5.175388 AGGTCTACCAAAAATGTCTACCC 57.825 43.478 1.26 0.00 38.89 3.69
693 719 4.600111 AGGTCTACCAAAAATGTCTACCCA 59.400 41.667 1.26 0.00 38.89 4.51
694 720 4.941873 GGTCTACCAAAAATGTCTACCCAG 59.058 45.833 0.00 0.00 35.64 4.45
695 721 4.941873 GTCTACCAAAAATGTCTACCCAGG 59.058 45.833 0.00 0.00 0.00 4.45
696 722 4.847512 TCTACCAAAAATGTCTACCCAGGA 59.152 41.667 0.00 0.00 0.00 3.86
697 723 4.034285 ACCAAAAATGTCTACCCAGGAG 57.966 45.455 0.00 0.00 0.00 3.69
698 724 3.397955 ACCAAAAATGTCTACCCAGGAGT 59.602 43.478 0.00 0.00 0.00 3.85
699 725 3.758554 CCAAAAATGTCTACCCAGGAGTG 59.241 47.826 0.00 0.00 0.00 3.51
700 726 4.398319 CAAAAATGTCTACCCAGGAGTGT 58.602 43.478 0.00 0.00 0.00 3.55
701 727 3.983044 AAATGTCTACCCAGGAGTGTC 57.017 47.619 0.00 0.00 0.00 3.67
702 728 2.930109 ATGTCTACCCAGGAGTGTCT 57.070 50.000 0.00 0.00 0.00 3.41
703 729 1.924731 TGTCTACCCAGGAGTGTCTG 58.075 55.000 0.00 0.00 34.70 3.51
704 730 1.427753 TGTCTACCCAGGAGTGTCTGA 59.572 52.381 0.00 0.00 36.93 3.27
705 731 2.158370 TGTCTACCCAGGAGTGTCTGAA 60.158 50.000 0.00 0.00 36.93 3.02
706 732 2.231721 GTCTACCCAGGAGTGTCTGAAC 59.768 54.545 0.00 0.00 36.93 3.18
707 733 2.158370 TCTACCCAGGAGTGTCTGAACA 60.158 50.000 0.00 0.00 36.93 3.18
708 734 1.507140 ACCCAGGAGTGTCTGAACAA 58.493 50.000 0.00 0.00 37.08 2.83
709 735 1.417890 ACCCAGGAGTGTCTGAACAAG 59.582 52.381 0.00 0.00 37.08 3.16
710 736 1.694150 CCCAGGAGTGTCTGAACAAGA 59.306 52.381 0.00 0.00 37.08 3.02
711 737 2.104792 CCCAGGAGTGTCTGAACAAGAA 59.895 50.000 0.00 0.00 37.08 2.52
712 738 3.397482 CCAGGAGTGTCTGAACAAGAAG 58.603 50.000 0.00 0.00 37.08 2.85
713 739 3.070159 CCAGGAGTGTCTGAACAAGAAGA 59.930 47.826 0.00 0.00 37.08 2.87
714 740 4.054671 CAGGAGTGTCTGAACAAGAAGAC 58.945 47.826 0.00 0.00 42.61 3.01
715 741 3.070302 AGGAGTGTCTGAACAAGAAGACC 59.930 47.826 0.70 0.00 41.79 3.85
716 742 3.070302 GGAGTGTCTGAACAAGAAGACCT 59.930 47.826 0.70 0.00 41.79 3.85
717 743 4.443598 GGAGTGTCTGAACAAGAAGACCTT 60.444 45.833 0.70 0.00 41.79 3.50
718 744 5.104259 AGTGTCTGAACAAGAAGACCTTT 57.896 39.130 0.70 0.00 41.79 3.11
719 745 5.501156 AGTGTCTGAACAAGAAGACCTTTT 58.499 37.500 0.70 0.00 41.79 2.27
720 746 5.946377 AGTGTCTGAACAAGAAGACCTTTTT 59.054 36.000 0.70 0.00 41.79 1.94
740 766 2.623878 TTTTAGAACACTCCCGTGCA 57.376 45.000 0.00 0.00 45.10 4.57
741 767 1.873698 TTTAGAACACTCCCGTGCAC 58.126 50.000 6.82 6.82 45.10 4.57
742 768 0.034337 TTAGAACACTCCCGTGCACC 59.966 55.000 12.15 0.00 45.10 5.01
743 769 0.830444 TAGAACACTCCCGTGCACCT 60.830 55.000 12.15 1.30 45.10 4.00
744 770 1.227853 GAACACTCCCGTGCACCTT 60.228 57.895 12.15 0.00 45.10 3.50
745 771 1.227853 AACACTCCCGTGCACCTTC 60.228 57.895 12.15 0.00 45.10 3.46
746 772 2.358737 CACTCCCGTGCACCTTCC 60.359 66.667 12.15 0.00 33.82 3.46
747 773 2.526873 ACTCCCGTGCACCTTCCT 60.527 61.111 12.15 0.00 0.00 3.36
748 774 2.266055 CTCCCGTGCACCTTCCTC 59.734 66.667 12.15 0.00 0.00 3.71
749 775 2.525629 TCCCGTGCACCTTCCTCA 60.526 61.111 12.15 0.00 0.00 3.86
750 776 2.111999 CTCCCGTGCACCTTCCTCAA 62.112 60.000 12.15 0.00 0.00 3.02
751 777 1.228124 CCCGTGCACCTTCCTCAAA 60.228 57.895 12.15 0.00 0.00 2.69
752 778 0.821711 CCCGTGCACCTTCCTCAAAA 60.822 55.000 12.15 0.00 0.00 2.44
753 779 1.028905 CCGTGCACCTTCCTCAAAAA 58.971 50.000 12.15 0.00 0.00 1.94
927 953 1.579084 TTAAATCCGCACCACCACGC 61.579 55.000 0.00 0.00 0.00 5.34
960 989 1.734477 CGATCGATCGCCACCATCC 60.734 63.158 32.34 0.00 43.84 3.51
984 1013 2.602676 CCCCTCCGGCTTCCAGAAA 61.603 63.158 0.00 0.00 0.00 2.52
985 1014 1.609783 CCCTCCGGCTTCCAGAAAT 59.390 57.895 0.00 0.00 0.00 2.17
988 1017 2.171003 CCTCCGGCTTCCAGAAATTTT 58.829 47.619 0.00 0.00 0.00 1.82
991 1020 3.226777 TCCGGCTTCCAGAAATTTTTCA 58.773 40.909 0.00 0.00 39.61 2.69
1127 1156 2.103263 ACAACTTCAAGAAGGTCTCGCT 59.897 45.455 13.83 0.00 42.53 4.93
1185 1224 3.062466 CCTCTCTGACCGTGCCGA 61.062 66.667 0.00 0.00 0.00 5.54
1395 1434 0.464013 TCGTTTCCTTTTGACCCGCA 60.464 50.000 0.00 0.00 0.00 5.69
1506 1545 4.813296 AGCGTATAATTGCTTTACTGGC 57.187 40.909 0.00 0.00 38.57 4.85
1512 1551 0.378257 ATTGCTTTACTGGCGCATCG 59.622 50.000 10.83 0.00 33.15 3.84
1539 1578 5.345741 CGTGCAATTTTGTTGGATAGAAAGG 59.654 40.000 0.00 0.00 0.00 3.11
1676 1718 4.883585 TGCTGAAGAAAGACACAGTTTGAT 59.116 37.500 0.00 0.00 33.57 2.57
1706 1748 6.630413 GCTTATCAGTAGTCAGGATTTGGTCA 60.630 42.308 0.00 0.00 0.00 4.02
1740 1782 1.591768 TTTGGTATCCTCCCAGTCCC 58.408 55.000 0.00 0.00 32.49 4.46
1741 1783 0.419865 TTGGTATCCTCCCAGTCCCA 59.580 55.000 0.00 0.00 32.49 4.37
1742 1784 0.647738 TGGTATCCTCCCAGTCCCAT 59.352 55.000 0.00 0.00 0.00 4.00
1758 1800 4.137543 GTCCCATTTGATTACTAGCCTGG 58.862 47.826 0.00 0.00 0.00 4.45
1829 2153 8.904099 ACTATTGATGGTTGTAGGCTATTAAC 57.096 34.615 13.21 13.21 0.00 2.01
1858 2182 4.435231 CGTGGTTTTAAGTTGTGTTTAGCG 59.565 41.667 0.00 0.00 0.00 4.26
1931 2255 4.036852 TGGCGATGAATACAACAACAACAA 59.963 37.500 0.00 0.00 0.00 2.83
1940 2270 7.653713 TGAATACAACAACAACAACAACAAAGT 59.346 29.630 0.00 0.00 0.00 2.66
2000 2330 2.222027 CCCATAAGAATCTCGCAACCC 58.778 52.381 0.00 0.00 0.00 4.11
2042 2403 5.488341 TGGCTAGTTCTTTGTTGATACTCC 58.512 41.667 0.00 0.00 0.00 3.85
2087 2448 2.996621 GACTCCTCCAATGTCAAGTTCG 59.003 50.000 0.00 0.00 0.00 3.95
2096 2457 0.971386 TGTCAAGTTCGGTCTACCCC 59.029 55.000 0.00 0.00 0.00 4.95
2151 2512 1.208052 TCCACTATGCACTGGAGCTTC 59.792 52.381 5.64 0.00 32.49 3.86
2169 2530 4.704833 TGGAGGCCTGCGCTGAAC 62.705 66.667 20.39 7.90 34.44 3.18
2185 2546 2.564062 CTGAACATGCCCAAACCATCTT 59.436 45.455 0.00 0.00 0.00 2.40
2615 2977 6.321848 TGCTCCACTAATTTGCATGATATG 57.678 37.500 0.00 0.00 0.00 1.78
2649 3011 6.200665 TGCATTTTCTTATGTTGCACAAGTTC 59.799 34.615 0.00 0.00 38.32 3.01
2728 3091 4.717778 TCCCCGGAGACATTATCTGTTTTA 59.282 41.667 0.73 0.00 38.00 1.52
2907 3270 1.015109 CAGCCACTCTGCATAGCTTG 58.985 55.000 0.00 0.00 35.78 4.01
2954 3317 7.046033 TCCGTTTTTACTCTTCTCTGAAGTTT 58.954 34.615 7.13 0.00 0.00 2.66
3033 3396 8.467402 TGTGTTTCAATTTAATTGTTCGTTGT 57.533 26.923 16.06 0.00 41.02 3.32
3124 3487 4.398044 CGGTTTGGTTTATAACTCAGGCAT 59.602 41.667 0.00 0.00 0.00 4.40
3157 3520 5.241728 AGGTCTTCAATTGAACTAGGCAAAC 59.758 40.000 16.91 2.38 28.44 2.93
3173 3536 4.821805 AGGCAAACGTTTATATGGATCAGG 59.178 41.667 14.20 0.00 0.00 3.86
3176 3539 5.373222 CAAACGTTTATATGGATCAGGGGA 58.627 41.667 14.20 0.00 0.00 4.81
3177 3540 4.891992 ACGTTTATATGGATCAGGGGAG 57.108 45.455 0.00 0.00 0.00 4.30
3326 3697 7.043458 CGAATTTGTCAGTTATGTTGCAAAAGT 60.043 33.333 0.00 0.00 32.32 2.66
3493 3864 9.918630 AAAAATGAACCAAATGAATCAGTAGAG 57.081 29.630 0.00 0.00 0.00 2.43
3514 3885 9.141400 GTAGAGTTGAATTCGAGTAACTTTGAT 57.859 33.333 9.52 2.08 33.83 2.57
3578 3949 0.108377 TGCACCGTGGTATGTAGCTG 60.108 55.000 0.00 0.00 0.00 4.24
3641 4017 4.038642 TGCTATTGGGTGTTTTCTCCAAAC 59.961 41.667 0.00 0.00 42.86 2.93
3924 4305 6.656693 AGCTCACATGATGCTAAAGTAAAGTT 59.343 34.615 0.00 0.00 35.05 2.66
4016 4397 4.096532 GGTTCCTATGCTTAAGCTTTGTCC 59.903 45.833 26.90 17.33 42.66 4.02
4038 4421 3.543656 CGATCTCCTACTGTTCGTACACG 60.544 52.174 0.00 0.00 41.45 4.49
4150 4533 6.204108 CCTGTTAACTGAATACACTTTTCGGT 59.796 38.462 13.56 0.00 42.95 4.69
4153 4536 7.280428 TGTTAACTGAATACACTTTTCGGTTCA 59.720 33.333 12.47 5.14 45.16 3.18
4156 4539 5.995282 ACTGAATACACTTTTCGGTTCATCA 59.005 36.000 0.00 0.00 39.14 3.07
4610 5014 5.239963 TGCATATCATACAAATGCTGGAGTG 59.760 40.000 7.89 0.00 44.96 3.51
4714 5120 4.633175 TGAGTTGTCGCCTATGTTTTGTA 58.367 39.130 0.00 0.00 0.00 2.41
4912 5562 2.230992 TGCATGTGCCACCAAATAGTTC 59.769 45.455 2.07 0.00 41.18 3.01
5015 5666 3.901844 TGAGCAAGTACAAGGTAGAAGGT 59.098 43.478 0.00 0.00 0.00 3.50
5162 5813 1.387084 GTTTCTGAGTTGACTAGCGCG 59.613 52.381 0.00 0.00 0.00 6.86
5409 6060 2.936202 ACAGGCAAGTTGTCAACTGAT 58.064 42.857 18.84 1.40 41.91 2.90
5413 6064 2.227388 GGCAAGTTGTCAACTGATCCAG 59.773 50.000 18.84 6.59 41.91 3.86
5434 6087 7.630082 TCCAGTTACTTGAATTTAGCCTACAT 58.370 34.615 0.00 0.00 0.00 2.29
5496 6179 3.728076 ACAGCTCGTTAGTGAGTTGAA 57.272 42.857 13.37 0.00 46.46 2.69
5497 6180 3.381949 ACAGCTCGTTAGTGAGTTGAAC 58.618 45.455 13.37 0.00 46.46 3.18
5543 6226 7.224557 ACATTTGGAAGCAACTTGTTTGTATTC 59.775 33.333 0.00 0.00 37.54 1.75
5592 6275 3.915437 CCTTCGGCATTAACAACTTGT 57.085 42.857 0.00 0.00 0.00 3.16
5593 6276 4.237349 CCTTCGGCATTAACAACTTGTT 57.763 40.909 11.82 11.82 43.88 2.83
5597 6280 3.632604 TCGGCATTAACAACTTGTTTGGA 59.367 39.130 12.35 0.87 41.45 3.53
5601 6284 4.808364 GCATTAACAACTTGTTTGGAAGCA 59.192 37.500 12.35 0.00 41.45 3.91
5602 6285 5.293079 GCATTAACAACTTGTTTGGAAGCAA 59.707 36.000 12.35 0.03 41.45 3.91
5603 6286 6.704819 CATTAACAACTTGTTTGGAAGCAAC 58.295 36.000 12.35 0.00 41.45 4.17
5604 6287 4.535526 AACAACTTGTTTGGAAGCAACT 57.464 36.364 1.00 0.00 37.26 3.16
5605 6288 4.535526 ACAACTTGTTTGGAAGCAACTT 57.464 36.364 0.00 0.00 39.84 2.66
5606 6289 4.244862 ACAACTTGTTTGGAAGCAACTTG 58.755 39.130 6.73 6.73 39.84 3.16
5607 6290 4.244862 CAACTTGTTTGGAAGCAACTTGT 58.755 39.130 0.00 0.00 0.00 3.16
5609 6292 4.893608 ACTTGTTTGGAAGCAACTTGTTT 58.106 34.783 0.00 0.00 0.00 2.83
5610 6293 4.690280 ACTTGTTTGGAAGCAACTTGTTTG 59.310 37.500 0.00 0.00 38.37 2.93
5611 6294 4.264460 TGTTTGGAAGCAACTTGTTTGT 57.736 36.364 0.00 0.00 37.54 2.83
5612 6295 5.392767 TGTTTGGAAGCAACTTGTTTGTA 57.607 34.783 0.00 0.00 37.54 2.41
5613 6296 5.971763 TGTTTGGAAGCAACTTGTTTGTAT 58.028 33.333 0.00 0.00 37.54 2.29
5614 6297 6.402222 TGTTTGGAAGCAACTTGTTTGTATT 58.598 32.000 0.00 0.00 37.54 1.89
5617 6300 8.874816 GTTTGGAAGCAACTTGTTTGTATTAAA 58.125 29.630 0.00 0.00 37.54 1.52
5618 6301 7.995463 TGGAAGCAACTTGTTTGTATTAAAC 57.005 32.000 0.00 0.00 37.54 2.01
5696 6465 2.435805 GAGATGGACCATACTGAGCCAA 59.564 50.000 7.05 0.00 31.53 4.52
5709 6478 0.462759 GAGCCAAGGATAGCGTTGCT 60.463 55.000 7.87 8.59 43.41 3.91
6024 6794 1.742880 CCCGACGGTCGTAGAGTCA 60.743 63.158 26.72 0.00 38.40 3.41
6105 6875 4.827087 ATGGCCGACAGCTCTGCG 62.827 66.667 0.00 2.33 43.05 5.18
6138 6908 4.451900 AGTTGTGATTTCTCAAACCGTCT 58.548 39.130 0.00 0.00 31.85 4.18
6171 6941 2.351157 GGAACACTGATGCTTCACTTGC 60.351 50.000 0.00 0.00 0.00 4.01
6215 6986 4.946478 TTGGACGGACAATTTTTGGAAT 57.054 36.364 0.00 0.00 34.12 3.01
6232 7003 4.606961 TGGAATGCTTTTCTTTTGTCGAC 58.393 39.130 9.11 9.11 0.00 4.20
6244 7015 5.224888 TCTTTTGTCGACGTTAGCAGTATT 58.775 37.500 11.62 0.00 0.00 1.89
6277 7051 0.540365 CTGATGTGCAAGGTGGGGTT 60.540 55.000 0.00 0.00 0.00 4.11
6312 7088 4.705023 CCCTGAAATAAAACCGGTTCTGAT 59.295 41.667 22.53 11.38 0.00 2.90
6371 7147 1.827344 AGATGACGGAGCATTCACTGA 59.173 47.619 0.00 0.00 0.00 3.41
6372 7148 2.159128 AGATGACGGAGCATTCACTGAG 60.159 50.000 0.00 0.00 0.00 3.35
6379 7155 2.383368 AGCATTCACTGAGTCTGCTC 57.617 50.000 7.73 0.00 38.78 4.26
6452 7232 4.569023 CGCGAGGCTGCCGATGTA 62.569 66.667 13.96 0.00 0.00 2.29
6453 7233 2.962253 GCGAGGCTGCCGATGTAC 60.962 66.667 13.96 1.44 0.00 2.90
6455 7235 2.279517 GAGGCTGCCGATGTACCG 60.280 66.667 13.96 0.00 0.00 4.02
6469 7250 2.999331 TGTACCGGTACAGTACTACCC 58.001 52.381 37.58 13.24 40.77 3.69
6513 7294 3.590824 CCTTGCCGGCGAAAGAAT 58.409 55.556 24.14 0.00 0.00 2.40
6514 7295 1.137404 CCTTGCCGGCGAAAGAATG 59.863 57.895 24.14 9.44 0.00 2.67
6516 7297 3.321315 TTGCCGGCGAAAGAATGCG 62.321 57.895 23.90 0.00 0.00 4.73
6517 7298 3.799755 GCCGGCGAAAGAATGCGT 61.800 61.111 12.58 0.00 0.00 5.24
6519 7300 1.209127 CCGGCGAAAGAATGCGTTT 59.791 52.632 9.30 0.00 0.00 3.60
6520 7301 0.386731 CCGGCGAAAGAATGCGTTTT 60.387 50.000 9.30 0.00 0.00 2.43
6521 7302 1.404477 CGGCGAAAGAATGCGTTTTT 58.596 45.000 0.00 0.00 0.00 1.94
6522 7303 1.122323 CGGCGAAAGAATGCGTTTTTG 59.878 47.619 0.00 0.00 0.00 2.44
6524 7305 2.153057 GGCGAAAGAATGCGTTTTTGTC 59.847 45.455 0.00 0.00 0.00 3.18
6527 7308 3.794028 CGAAAGAATGCGTTTTTGTCCAA 59.206 39.130 0.00 0.00 0.00 3.53
6528 7309 4.266502 CGAAAGAATGCGTTTTTGTCCAAA 59.733 37.500 0.00 0.00 0.00 3.28
6529 7310 5.554324 CGAAAGAATGCGTTTTTGTCCAAAG 60.554 40.000 0.00 0.00 0.00 2.77
6530 7311 4.385358 AGAATGCGTTTTTGTCCAAAGT 57.615 36.364 0.00 0.00 0.00 2.66
6532 7313 3.791973 ATGCGTTTTTGTCCAAAGTCA 57.208 38.095 0.00 0.00 0.00 3.41
6533 7314 2.869897 TGCGTTTTTGTCCAAAGTCAC 58.130 42.857 0.00 0.00 0.00 3.67
6534 7315 2.190161 GCGTTTTTGTCCAAAGTCACC 58.810 47.619 0.00 0.00 0.00 4.02
6535 7316 2.446282 CGTTTTTGTCCAAAGTCACCG 58.554 47.619 0.00 0.00 0.00 4.94
6536 7317 2.793237 CGTTTTTGTCCAAAGTCACCGG 60.793 50.000 0.00 0.00 0.00 5.28
6538 7319 1.440938 TTTGTCCAAAGTCACCGGCG 61.441 55.000 0.00 0.00 0.00 6.46
6540 7321 2.029964 TCCAAAGTCACCGGCGTC 59.970 61.111 6.01 0.00 0.00 5.19
6581 7371 6.183360 GGATCCTTCGAAATTTAGTACTCCCT 60.183 42.308 3.84 0.00 0.00 4.20
6582 7372 6.616237 TCCTTCGAAATTTAGTACTCCCTT 57.384 37.500 0.00 0.00 0.00 3.95
6583 7373 6.637657 TCCTTCGAAATTTAGTACTCCCTTC 58.362 40.000 0.00 0.00 0.00 3.46
6584 7374 6.211986 TCCTTCGAAATTTAGTACTCCCTTCA 59.788 38.462 0.00 0.00 0.00 3.02
6585 7375 7.048512 CCTTCGAAATTTAGTACTCCCTTCAT 58.951 38.462 0.00 0.00 0.00 2.57
6586 7376 7.553044 CCTTCGAAATTTAGTACTCCCTTCATT 59.447 37.037 0.00 0.00 0.00 2.57
6587 7377 8.857694 TTCGAAATTTAGTACTCCCTTCATTT 57.142 30.769 0.00 0.00 0.00 2.32
6588 7378 8.857694 TCGAAATTTAGTACTCCCTTCATTTT 57.142 30.769 0.00 0.00 0.00 1.82
6589 7379 9.292195 TCGAAATTTAGTACTCCCTTCATTTTT 57.708 29.630 0.00 0.00 0.00 1.94
6600 7390 8.056407 ACTCCCTTCATTTTTATTTACTCTGC 57.944 34.615 0.00 0.00 0.00 4.26
6601 7391 7.669722 ACTCCCTTCATTTTTATTTACTCTGCA 59.330 33.333 0.00 0.00 0.00 4.41
6602 7392 8.593945 TCCCTTCATTTTTATTTACTCTGCAT 57.406 30.769 0.00 0.00 0.00 3.96
6603 7393 9.693739 TCCCTTCATTTTTATTTACTCTGCATA 57.306 29.630 0.00 0.00 0.00 3.14
6617 7407 9.719355 TTTACTCTGCATATTAAAGTTGACTGA 57.281 29.630 0.00 0.00 0.00 3.41
6618 7408 9.719355 TTACTCTGCATATTAAAGTTGACTGAA 57.281 29.630 0.00 0.00 0.00 3.02
6619 7409 8.261492 ACTCTGCATATTAAAGTTGACTGAAG 57.739 34.615 0.00 0.00 0.00 3.02
6620 7410 7.880195 ACTCTGCATATTAAAGTTGACTGAAGT 59.120 33.333 0.00 0.00 0.00 3.01
6621 7411 8.256611 TCTGCATATTAAAGTTGACTGAAGTC 57.743 34.615 3.41 3.41 44.97 3.01
6637 7427 8.965986 GACTGAAGTCAAAGTTTGTTAAGTTT 57.034 30.769 15.08 2.96 44.18 2.66
6708 7498 5.801350 ATGATGTGGAAGTACATTCAACG 57.199 39.130 0.00 0.00 43.86 4.10
6709 7499 4.888917 TGATGTGGAAGTACATTCAACGA 58.111 39.130 0.00 0.00 43.86 3.85
6710 7500 5.487433 TGATGTGGAAGTACATTCAACGAT 58.513 37.500 0.00 0.00 43.86 3.73
6711 7501 5.351189 TGATGTGGAAGTACATTCAACGATG 59.649 40.000 0.00 0.00 43.86 3.84
6712 7502 4.888917 TGTGGAAGTACATTCAACGATGA 58.111 39.130 0.00 0.00 43.86 2.92
6726 7516 6.375945 TCAACGATGAATCCAATGGTATTG 57.624 37.500 0.00 0.00 30.99 1.90
6727 7517 6.118852 TCAACGATGAATCCAATGGTATTGA 58.881 36.000 0.00 0.00 30.99 2.57
6728 7518 6.038161 TCAACGATGAATCCAATGGTATTGAC 59.962 38.462 0.00 0.00 30.99 3.18
6729 7519 5.684704 ACGATGAATCCAATGGTATTGACT 58.315 37.500 0.00 0.00 0.00 3.41
6730 7520 6.122277 ACGATGAATCCAATGGTATTGACTT 58.878 36.000 0.00 0.00 0.00 3.01
6731 7521 6.038603 ACGATGAATCCAATGGTATTGACTTG 59.961 38.462 0.00 0.00 0.00 3.16
6732 7522 6.038603 CGATGAATCCAATGGTATTGACTTGT 59.961 38.462 0.00 0.00 0.00 3.16
6733 7523 7.415541 CGATGAATCCAATGGTATTGACTTGTT 60.416 37.037 0.00 0.00 0.00 2.83
6734 7524 8.821686 ATGAATCCAATGGTATTGACTTGTTA 57.178 30.769 0.00 0.00 0.00 2.41
6735 7525 8.821686 TGAATCCAATGGTATTGACTTGTTAT 57.178 30.769 0.00 0.00 0.00 1.89
6736 7526 9.253832 TGAATCCAATGGTATTGACTTGTTATT 57.746 29.630 0.00 0.00 0.00 1.40
6737 7527 9.520204 GAATCCAATGGTATTGACTTGTTATTG 57.480 33.333 0.00 0.00 0.00 1.90
6738 7528 8.593945 ATCCAATGGTATTGACTTGTTATTGT 57.406 30.769 0.00 0.00 0.00 2.71
6739 7529 9.693739 ATCCAATGGTATTGACTTGTTATTGTA 57.306 29.630 0.00 0.00 0.00 2.41
6740 7530 9.693739 TCCAATGGTATTGACTTGTTATTGTAT 57.306 29.630 0.00 0.00 0.00 2.29
6790 7580 8.770438 TTTGTCAAAATTTACAAAGCTTGACT 57.230 26.923 20.78 0.00 39.88 3.41
6791 7581 8.770438 TTGTCAAAATTTACAAAGCTTGACTT 57.230 26.923 20.78 0.00 40.48 3.01
6811 7601 4.601019 CTTTGACCAAAGCTAATATGCGG 58.399 43.478 9.25 0.00 40.94 5.69
6812 7602 3.552132 TGACCAAAGCTAATATGCGGA 57.448 42.857 0.00 0.00 38.13 5.54
6813 7603 3.879998 TGACCAAAGCTAATATGCGGAA 58.120 40.909 0.00 0.00 38.13 4.30
6814 7604 4.460263 TGACCAAAGCTAATATGCGGAAT 58.540 39.130 0.00 0.00 38.13 3.01
6815 7605 5.616270 TGACCAAAGCTAATATGCGGAATA 58.384 37.500 0.00 0.00 38.13 1.75
6816 7606 6.058833 TGACCAAAGCTAATATGCGGAATAA 58.941 36.000 0.00 0.00 38.13 1.40
6817 7607 6.544197 TGACCAAAGCTAATATGCGGAATAAA 59.456 34.615 0.00 0.00 38.13 1.40
6818 7608 7.230510 TGACCAAAGCTAATATGCGGAATAAAT 59.769 33.333 0.00 0.00 38.13 1.40
6819 7609 8.630054 ACCAAAGCTAATATGCGGAATAAATA 57.370 30.769 0.00 0.00 38.13 1.40
6820 7610 9.073475 ACCAAAGCTAATATGCGGAATAAATAA 57.927 29.630 0.00 0.00 38.13 1.40
6821 7611 9.906660 CCAAAGCTAATATGCGGAATAAATAAA 57.093 29.630 0.00 0.00 38.13 1.40
6825 7615 9.607285 AGCTAATATGCGGAATAAATAAAAACG 57.393 29.630 0.00 0.00 38.13 3.60
6826 7616 8.846607 GCTAATATGCGGAATAAATAAAAACGG 58.153 33.333 0.00 0.00 0.00 4.44
6829 7619 5.238006 TGCGGAATAAATAAAAACGGAGG 57.762 39.130 0.00 0.00 0.00 4.30
6830 7620 4.096682 TGCGGAATAAATAAAAACGGAGGG 59.903 41.667 0.00 0.00 0.00 4.30
6831 7621 4.336153 GCGGAATAAATAAAAACGGAGGGA 59.664 41.667 0.00 0.00 0.00 4.20
6832 7622 5.505159 GCGGAATAAATAAAAACGGAGGGAG 60.505 44.000 0.00 0.00 0.00 4.30
6833 7623 5.587443 CGGAATAAATAAAAACGGAGGGAGT 59.413 40.000 0.00 0.00 0.00 3.85
6834 7624 6.762661 CGGAATAAATAAAAACGGAGGGAGTA 59.237 38.462 0.00 0.00 0.00 2.59
6835 7625 7.254556 CGGAATAAATAAAAACGGAGGGAGTAC 60.255 40.741 0.00 0.00 0.00 2.73
6836 7626 7.553760 GGAATAAATAAAAACGGAGGGAGTACA 59.446 37.037 0.00 0.00 0.00 2.90
6837 7627 7.854557 ATAAATAAAAACGGAGGGAGTACAC 57.145 36.000 0.00 0.00 0.00 2.90
6838 7628 2.159327 AAAAACGGAGGGAGTACACG 57.841 50.000 0.00 0.00 0.00 4.49
6839 7629 0.319405 AAAACGGAGGGAGTACACGG 59.681 55.000 0.00 0.00 0.00 4.94
6840 7630 2.163601 AAACGGAGGGAGTACACGGC 62.164 60.000 0.00 0.00 0.00 5.68
6841 7631 2.754658 CGGAGGGAGTACACGGCT 60.755 66.667 0.00 0.00 0.00 5.52
6842 7632 2.348888 CGGAGGGAGTACACGGCTT 61.349 63.158 0.00 0.00 0.00 4.35
6843 7633 1.033746 CGGAGGGAGTACACGGCTTA 61.034 60.000 0.00 0.00 0.00 3.09
6844 7634 1.411041 GGAGGGAGTACACGGCTTAT 58.589 55.000 0.00 0.00 0.00 1.73
6845 7635 2.590821 GGAGGGAGTACACGGCTTATA 58.409 52.381 0.00 0.00 0.00 0.98
6846 7636 2.961062 GGAGGGAGTACACGGCTTATAA 59.039 50.000 0.00 0.00 0.00 0.98
6847 7637 3.385755 GGAGGGAGTACACGGCTTATAAA 59.614 47.826 0.00 0.00 0.00 1.40
6848 7638 4.141869 GGAGGGAGTACACGGCTTATAAAA 60.142 45.833 0.00 0.00 0.00 1.52
6849 7639 5.454329 GGAGGGAGTACACGGCTTATAAAAT 60.454 44.000 0.00 0.00 0.00 1.82
6850 7640 5.608449 AGGGAGTACACGGCTTATAAAATC 58.392 41.667 0.00 0.00 0.00 2.17
6851 7641 5.365895 AGGGAGTACACGGCTTATAAAATCT 59.634 40.000 0.00 0.00 0.00 2.40
6852 7642 5.695363 GGGAGTACACGGCTTATAAAATCTC 59.305 44.000 0.00 0.00 0.00 2.75
6853 7643 6.462628 GGGAGTACACGGCTTATAAAATCTCT 60.463 42.308 0.00 0.00 0.00 3.10
6854 7644 6.641723 GGAGTACACGGCTTATAAAATCTCTC 59.358 42.308 0.00 0.00 0.00 3.20
6855 7645 7.108841 AGTACACGGCTTATAAAATCTCTCA 57.891 36.000 0.00 0.00 0.00 3.27
6856 7646 7.203910 AGTACACGGCTTATAAAATCTCTCAG 58.796 38.462 0.00 0.00 0.00 3.35
6857 7647 5.978814 ACACGGCTTATAAAATCTCTCAGT 58.021 37.500 0.00 0.00 0.00 3.41
6858 7648 7.108841 ACACGGCTTATAAAATCTCTCAGTA 57.891 36.000 0.00 0.00 0.00 2.74
6859 7649 7.203910 ACACGGCTTATAAAATCTCTCAGTAG 58.796 38.462 0.00 0.00 0.00 2.57
6860 7650 6.642950 CACGGCTTATAAAATCTCTCAGTAGG 59.357 42.308 0.00 0.00 0.00 3.18
6861 7651 5.635700 CGGCTTATAAAATCTCTCAGTAGGC 59.364 44.000 0.00 0.00 0.00 3.93
6862 7652 6.517529 CGGCTTATAAAATCTCTCAGTAGGCT 60.518 42.308 0.00 0.00 0.00 4.58
6863 7653 6.648725 GGCTTATAAAATCTCTCAGTAGGCTG 59.351 42.308 0.00 0.00 43.87 4.85
6864 7654 6.147000 GCTTATAAAATCTCTCAGTAGGCTGC 59.853 42.308 0.00 0.00 42.29 5.25
6865 7655 3.988976 AAAATCTCTCAGTAGGCTGCA 57.011 42.857 5.14 0.00 42.29 4.41
6866 7656 2.977772 AATCTCTCAGTAGGCTGCAC 57.022 50.000 5.14 0.00 42.29 4.57
6867 7657 2.157640 ATCTCTCAGTAGGCTGCACT 57.842 50.000 5.14 0.00 42.29 4.40
6868 7658 2.808906 TCTCTCAGTAGGCTGCACTA 57.191 50.000 5.14 0.00 42.29 2.74
6869 7659 2.370349 TCTCTCAGTAGGCTGCACTAC 58.630 52.381 15.91 15.91 42.29 2.73
6870 7660 1.064803 CTCTCAGTAGGCTGCACTACG 59.935 57.143 16.97 13.52 46.14 3.51
6871 7661 0.526524 CTCAGTAGGCTGCACTACGC 60.527 60.000 16.97 0.00 46.14 4.42
6872 7662 1.519455 CAGTAGGCTGCACTACGCC 60.519 63.158 16.97 6.59 46.14 5.68
6878 7668 3.449227 CTGCACTACGCCTCCGGA 61.449 66.667 2.93 2.93 41.33 5.14
6899 7689 6.341316 CGGAGAATTATCTTGTCAAGGAAGA 58.659 40.000 12.66 0.00 35.54 2.87
6905 7695 3.371102 TCTTGTCAAGGAAGACTCGTG 57.629 47.619 12.66 0.00 39.27 4.35
6921 7711 1.202521 TCGTGCTGCTTGAGAAAGTGA 60.203 47.619 0.00 0.00 0.00 3.41
6927 7717 3.126831 CTGCTTGAGAAAGTGACGAGTT 58.873 45.455 0.00 0.00 0.00 3.01
6928 7718 4.299155 CTGCTTGAGAAAGTGACGAGTTA 58.701 43.478 0.00 0.00 0.00 2.24
6929 7719 4.049186 TGCTTGAGAAAGTGACGAGTTAC 58.951 43.478 0.00 0.00 0.00 2.50
6935 7725 9.622004 CTTGAGAAAGTGACGAGTTACTATTTA 57.378 33.333 1.06 0.00 0.00 1.40
6958 7748 6.515272 AAACTAGGGATGTTTATTGCACAG 57.485 37.500 0.00 0.00 36.07 3.66
6975 7765 2.828868 GTGCACTCACTCCACCCA 59.171 61.111 10.32 0.00 40.03 4.51
6976 7766 1.302033 GTGCACTCACTCCACCCAG 60.302 63.158 10.32 0.00 40.03 4.45
6979 7769 1.188219 GCACTCACTCCACCCAGAGA 61.188 60.000 0.00 0.00 37.33 3.10
6980 7770 0.605589 CACTCACTCCACCCAGAGAC 59.394 60.000 0.00 0.00 37.33 3.36
6981 7771 0.188587 ACTCACTCCACCCAGAGACA 59.811 55.000 0.00 0.00 37.33 3.41
6982 7772 0.894141 CTCACTCCACCCAGAGACAG 59.106 60.000 0.00 0.00 37.33 3.51
6983 7773 0.188587 TCACTCCACCCAGAGACAGT 59.811 55.000 0.00 0.00 37.33 3.55
6984 7774 0.319728 CACTCCACCCAGAGACAGTG 59.680 60.000 0.00 0.00 37.33 3.66
6985 7775 1.294780 CTCCACCCAGAGACAGTGC 59.705 63.158 0.00 0.00 35.82 4.40
6987 7777 1.302033 CCACCCAGAGACAGTGCAC 60.302 63.158 9.40 9.40 0.00 4.57
6992 7997 1.735920 CAGAGACAGTGCACTCGCC 60.736 63.158 18.64 8.96 38.08 5.54
6995 8000 2.433318 GACAGTGCACTCGCCCTC 60.433 66.667 18.64 2.90 37.32 4.30
7013 8018 4.764771 GCCATGCCTGGGGAAGCA 62.765 66.667 10.28 0.00 43.36 3.91
7017 8022 2.589540 TGCCTGGGGAAGCATACG 59.410 61.111 0.00 0.00 33.08 3.06
7018 8023 2.203209 GCCTGGGGAAGCATACGG 60.203 66.667 0.00 0.00 0.00 4.02
7019 8024 3.043999 GCCTGGGGAAGCATACGGT 62.044 63.158 0.00 0.00 0.00 4.83
7020 8025 1.146263 CCTGGGGAAGCATACGGTC 59.854 63.158 0.00 0.00 0.00 4.79
7022 8027 0.179073 CTGGGGAAGCATACGGTCAG 60.179 60.000 0.00 0.00 0.00 3.51
7030 8035 1.550524 AGCATACGGTCAGAAGCAAGA 59.449 47.619 0.00 0.00 0.00 3.02
7055 8060 7.117241 TGCAGTAAAAACTCAGTAGAAATCG 57.883 36.000 0.00 0.00 0.00 3.34
7057 8062 6.128526 GCAGTAAAAACTCAGTAGAAATCGCT 60.129 38.462 0.00 0.00 0.00 4.93
7060 8065 8.283291 AGTAAAAACTCAGTAGAAATCGCTTTG 58.717 33.333 0.00 0.00 0.00 2.77
7061 8066 6.861065 AAAACTCAGTAGAAATCGCTTTGA 57.139 33.333 0.00 0.00 0.00 2.69
7062 8067 7.440523 AAAACTCAGTAGAAATCGCTTTGAT 57.559 32.000 0.00 0.00 39.67 2.57
7064 8069 8.547967 AAACTCAGTAGAAATCGCTTTGATTA 57.452 30.769 0.00 0.00 46.65 1.75
7066 8071 8.136057 ACTCAGTAGAAATCGCTTTGATTATG 57.864 34.615 0.00 0.00 46.65 1.90
7069 8074 8.946085 TCAGTAGAAATCGCTTTGATTATGTTT 58.054 29.630 0.00 0.00 46.65 2.83
7079 8087 9.959749 TCGCTTTGATTATGTTTTAAAAGTTCT 57.040 25.926 0.00 0.00 0.00 3.01
7119 8127 9.739276 TGTTAGAAAGATGATGTTCCATAAACT 57.261 29.630 0.00 0.00 38.76 2.66
7122 8130 8.641498 AGAAAGATGATGTTCCATAAACTTGT 57.359 30.769 0.00 0.00 38.76 3.16
7123 8131 8.517878 AGAAAGATGATGTTCCATAAACTTGTG 58.482 33.333 0.00 0.00 38.76 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.692749 GAAAAAGGAGAATAAAGAAAAACGGAT 57.307 29.630 0.00 0.00 0.00 4.18
78 81 9.813826 AGGAATGGAAAAATAGAGAAGAGAAAA 57.186 29.630 0.00 0.00 0.00 2.29
82 85 9.852091 CAAAAGGAATGGAAAAATAGAGAAGAG 57.148 33.333 0.00 0.00 0.00 2.85
98 107 8.914328 AACAAAAGAAAAATGCAAAAGGAATG 57.086 26.923 0.00 0.00 0.00 2.67
99 108 9.571810 GAAACAAAAGAAAAATGCAAAAGGAAT 57.428 25.926 0.00 0.00 0.00 3.01
102 111 8.969121 AAGAAACAAAAGAAAAATGCAAAAGG 57.031 26.923 0.00 0.00 0.00 3.11
136 159 6.536224 CCAACAGAGCAAAGAAAACTGAAAAT 59.464 34.615 0.00 0.00 33.53 1.82
141 164 4.376340 ACCAACAGAGCAAAGAAAACTG 57.624 40.909 0.00 0.00 35.14 3.16
144 167 9.691362 GAATAATAACCAACAGAGCAAAGAAAA 57.309 29.630 0.00 0.00 0.00 2.29
145 168 9.077885 AGAATAATAACCAACAGAGCAAAGAAA 57.922 29.630 0.00 0.00 0.00 2.52
146 169 8.635765 AGAATAATAACCAACAGAGCAAAGAA 57.364 30.769 0.00 0.00 0.00 2.52
147 170 9.162764 GTAGAATAATAACCAACAGAGCAAAGA 57.837 33.333 0.00 0.00 0.00 2.52
148 171 8.946085 TGTAGAATAATAACCAACAGAGCAAAG 58.054 33.333 0.00 0.00 0.00 2.77
149 172 8.856153 TGTAGAATAATAACCAACAGAGCAAA 57.144 30.769 0.00 0.00 0.00 3.68
150 173 9.461312 AATGTAGAATAATAACCAACAGAGCAA 57.539 29.630 0.00 0.00 0.00 3.91
151 174 9.461312 AAATGTAGAATAATAACCAACAGAGCA 57.539 29.630 0.00 0.00 0.00 4.26
253 279 5.457473 ACGAAAATGCCGAGTAAAAACAAAG 59.543 36.000 0.00 0.00 0.00 2.77
262 288 5.893687 TGAACTATACGAAAATGCCGAGTA 58.106 37.500 0.00 0.00 0.00 2.59
267 293 7.408921 CGTGTTTTTGAACTATACGAAAATGCC 60.409 37.037 0.00 0.00 34.54 4.40
268 294 7.112426 ACGTGTTTTTGAACTATACGAAAATGC 59.888 33.333 0.00 0.00 34.54 3.56
270 296 9.505995 AAACGTGTTTTTGAACTATACGAAAAT 57.494 25.926 0.00 0.00 34.54 1.82
299 325 9.234827 TCAATGTTGAGATGTTGATCACTTATT 57.765 29.630 0.00 0.00 32.50 1.40
300 326 8.671921 GTCAATGTTGAGATGTTGATCACTTAT 58.328 33.333 0.00 0.00 37.98 1.73
301 327 7.119699 GGTCAATGTTGAGATGTTGATCACTTA 59.880 37.037 0.00 0.00 37.98 2.24
302 328 6.072286 GGTCAATGTTGAGATGTTGATCACTT 60.072 38.462 0.00 0.00 37.98 3.16
303 329 5.413833 GGTCAATGTTGAGATGTTGATCACT 59.586 40.000 0.00 0.00 37.98 3.41
304 330 5.634896 GGTCAATGTTGAGATGTTGATCAC 58.365 41.667 0.00 0.00 37.98 3.06
305 331 4.392754 CGGTCAATGTTGAGATGTTGATCA 59.607 41.667 0.00 0.00 37.98 2.92
306 332 4.631377 TCGGTCAATGTTGAGATGTTGATC 59.369 41.667 0.00 0.00 37.98 2.92
307 333 4.578871 TCGGTCAATGTTGAGATGTTGAT 58.421 39.130 0.00 0.00 37.98 2.57
308 334 4.001618 TCGGTCAATGTTGAGATGTTGA 57.998 40.909 0.00 0.00 37.98 3.18
309 335 4.747540 TTCGGTCAATGTTGAGATGTTG 57.252 40.909 0.00 0.00 37.98 3.33
310 336 4.379813 GCATTCGGTCAATGTTGAGATGTT 60.380 41.667 0.00 0.00 43.62 2.71
311 337 3.127548 GCATTCGGTCAATGTTGAGATGT 59.872 43.478 0.00 0.00 43.62 3.06
312 338 3.376234 AGCATTCGGTCAATGTTGAGATG 59.624 43.478 0.00 1.15 43.62 2.90
313 339 3.614092 AGCATTCGGTCAATGTTGAGAT 58.386 40.909 0.00 0.00 43.62 2.75
314 340 3.057969 AGCATTCGGTCAATGTTGAGA 57.942 42.857 0.00 0.00 43.62 3.27
315 341 3.837213 AAGCATTCGGTCAATGTTGAG 57.163 42.857 0.00 0.00 43.62 3.02
316 342 5.414144 TGAATAAGCATTCGGTCAATGTTGA 59.586 36.000 0.00 0.00 43.62 3.18
317 343 5.639757 TGAATAAGCATTCGGTCAATGTTG 58.360 37.500 0.00 0.00 43.62 3.33
318 344 5.895636 TGAATAAGCATTCGGTCAATGTT 57.104 34.783 0.00 0.00 43.62 2.71
319 345 5.393027 GGTTGAATAAGCATTCGGTCAATGT 60.393 40.000 0.00 0.00 43.62 2.71
320 346 5.036737 GGTTGAATAAGCATTCGGTCAATG 58.963 41.667 0.00 0.00 43.06 2.82
321 347 4.949856 AGGTTGAATAAGCATTCGGTCAAT 59.050 37.500 0.00 0.00 43.06 2.57
322 348 4.331968 AGGTTGAATAAGCATTCGGTCAA 58.668 39.130 0.00 0.00 43.06 3.18
323 349 3.950397 AGGTTGAATAAGCATTCGGTCA 58.050 40.909 0.00 0.00 43.06 4.02
324 350 4.965119 AAGGTTGAATAAGCATTCGGTC 57.035 40.909 0.00 0.00 43.06 4.79
325 351 5.722021 AAAAGGTTGAATAAGCATTCGGT 57.278 34.783 0.00 0.00 43.06 4.69
349 375 9.619316 CATTCGGAAATGTTGAACAAGTATTTA 57.381 29.630 0.62 0.00 37.97 1.40
350 376 7.116233 GCATTCGGAAATGTTGAACAAGTATTT 59.884 33.333 0.62 0.00 43.54 1.40
351 377 6.586082 GCATTCGGAAATGTTGAACAAGTATT 59.414 34.615 0.62 0.00 43.54 1.89
352 378 6.092748 GCATTCGGAAATGTTGAACAAGTAT 58.907 36.000 0.62 0.00 43.54 2.12
353 379 5.009110 TGCATTCGGAAATGTTGAACAAGTA 59.991 36.000 0.62 0.00 43.54 2.24
354 380 4.202101 TGCATTCGGAAATGTTGAACAAGT 60.202 37.500 0.62 0.00 43.54 3.16
355 381 4.148696 GTGCATTCGGAAATGTTGAACAAG 59.851 41.667 0.62 0.00 43.54 3.16
356 382 4.047822 GTGCATTCGGAAATGTTGAACAA 58.952 39.130 0.62 0.00 43.54 2.83
357 383 3.637432 GTGCATTCGGAAATGTTGAACA 58.363 40.909 0.00 0.00 43.54 3.18
358 384 2.656422 CGTGCATTCGGAAATGTTGAAC 59.344 45.455 0.00 0.00 43.54 3.18
359 385 2.292016 ACGTGCATTCGGAAATGTTGAA 59.708 40.909 1.59 0.00 43.54 2.69
360 386 1.876799 ACGTGCATTCGGAAATGTTGA 59.123 42.857 1.59 0.00 43.54 3.18
361 387 2.330231 ACGTGCATTCGGAAATGTTG 57.670 45.000 1.59 0.00 43.54 3.33
362 388 2.292016 TGAACGTGCATTCGGAAATGTT 59.708 40.909 0.00 0.00 43.54 2.71
363 389 1.876799 TGAACGTGCATTCGGAAATGT 59.123 42.857 0.00 0.00 43.54 2.71
364 390 2.610219 TGAACGTGCATTCGGAAATG 57.390 45.000 0.00 0.00 44.31 2.32
365 391 2.292016 TGTTGAACGTGCATTCGGAAAT 59.708 40.909 0.00 0.00 34.94 2.17
366 392 1.671328 TGTTGAACGTGCATTCGGAAA 59.329 42.857 0.00 0.00 34.94 3.13
367 393 1.300481 TGTTGAACGTGCATTCGGAA 58.700 45.000 0.00 0.00 34.94 4.30
368 394 1.518325 ATGTTGAACGTGCATTCGGA 58.482 45.000 0.00 0.00 34.94 4.55
369 395 2.330231 AATGTTGAACGTGCATTCGG 57.670 45.000 0.00 0.00 34.94 4.30
370 396 4.690731 AAAAATGTTGAACGTGCATTCG 57.309 36.364 0.00 0.00 32.38 3.34
439 465 9.520204 CAGAAGTATTTGAAATGTTGAACAAGT 57.480 29.630 0.62 0.00 0.00 3.16
440 466 8.482429 GCAGAAGTATTTGAAATGTTGAACAAG 58.518 33.333 0.62 0.00 0.00 3.16
441 467 7.978414 TGCAGAAGTATTTGAAATGTTGAACAA 59.022 29.630 0.62 0.00 0.00 2.83
442 468 7.487484 TGCAGAAGTATTTGAAATGTTGAACA 58.513 30.769 0.00 0.00 0.00 3.18
443 469 7.928908 TGCAGAAGTATTTGAAATGTTGAAC 57.071 32.000 0.00 0.00 0.00 3.18
444 470 7.978414 TGTTGCAGAAGTATTTGAAATGTTGAA 59.022 29.630 0.00 0.00 0.00 2.69
445 471 7.487484 TGTTGCAGAAGTATTTGAAATGTTGA 58.513 30.769 0.00 0.00 0.00 3.18
446 472 7.697352 TGTTGCAGAAGTATTTGAAATGTTG 57.303 32.000 0.00 0.00 0.00 3.33
447 473 8.891671 AATGTTGCAGAAGTATTTGAAATGTT 57.108 26.923 0.00 0.00 0.00 2.71
448 474 8.891671 AAATGTTGCAGAAGTATTTGAAATGT 57.108 26.923 0.00 0.00 0.00 2.71
451 477 9.376075 TCAAAAATGTTGCAGAAGTATTTGAAA 57.624 25.926 10.98 0.00 32.99 2.69
452 478 8.939201 TCAAAAATGTTGCAGAAGTATTTGAA 57.061 26.923 10.98 0.47 32.99 2.69
453 479 8.196771 ACTCAAAAATGTTGCAGAAGTATTTGA 58.803 29.630 12.13 12.13 34.31 2.69
454 480 8.356533 ACTCAAAAATGTTGCAGAAGTATTTG 57.643 30.769 0.00 0.00 0.00 2.32
455 481 9.463443 GTACTCAAAAATGTTGCAGAAGTATTT 57.537 29.630 0.00 0.00 0.00 1.40
456 482 8.850156 AGTACTCAAAAATGTTGCAGAAGTATT 58.150 29.630 0.00 0.00 0.00 1.89
457 483 8.396272 AGTACTCAAAAATGTTGCAGAAGTAT 57.604 30.769 0.00 0.00 0.00 2.12
458 484 7.801716 AGTACTCAAAAATGTTGCAGAAGTA 57.198 32.000 0.00 0.00 0.00 2.24
459 485 6.699575 AGTACTCAAAAATGTTGCAGAAGT 57.300 33.333 0.00 0.00 0.00 3.01
460 486 6.074676 GCAAGTACTCAAAAATGTTGCAGAAG 60.075 38.462 0.00 0.00 38.89 2.85
461 487 5.748152 GCAAGTACTCAAAAATGTTGCAGAA 59.252 36.000 0.00 0.00 38.89 3.02
462 488 5.067674 AGCAAGTACTCAAAAATGTTGCAGA 59.932 36.000 11.71 0.00 40.97 4.26
463 489 5.284079 AGCAAGTACTCAAAAATGTTGCAG 58.716 37.500 11.71 0.00 40.97 4.41
464 490 5.163571 TGAGCAAGTACTCAAAAATGTTGCA 60.164 36.000 11.71 0.00 43.59 4.08
465 491 5.280945 TGAGCAAGTACTCAAAAATGTTGC 58.719 37.500 0.00 0.00 43.59 4.17
479 505 9.820229 CGAGTATTTAAAAATGTTGAGCAAGTA 57.180 29.630 0.00 0.00 0.00 2.24
480 506 8.349983 ACGAGTATTTAAAAATGTTGAGCAAGT 58.650 29.630 0.00 0.00 0.00 3.16
481 507 8.728088 ACGAGTATTTAAAAATGTTGAGCAAG 57.272 30.769 0.00 0.00 0.00 4.01
482 508 9.176181 GAACGAGTATTTAAAAATGTTGAGCAA 57.824 29.630 0.00 0.00 0.00 3.91
483 509 8.346300 TGAACGAGTATTTAAAAATGTTGAGCA 58.654 29.630 0.00 0.00 0.00 4.26
484 510 8.722342 TGAACGAGTATTTAAAAATGTTGAGC 57.278 30.769 0.00 0.00 0.00 4.26
664 690 9.490379 GTAGACATTTTTGGTAGACCTATATGG 57.510 37.037 0.00 0.00 42.93 2.74
665 691 9.490379 GGTAGACATTTTTGGTAGACCTATATG 57.510 37.037 0.00 3.01 36.82 1.78
666 692 8.657712 GGGTAGACATTTTTGGTAGACCTATAT 58.342 37.037 0.00 0.00 36.82 0.86
667 693 7.624478 TGGGTAGACATTTTTGGTAGACCTATA 59.376 37.037 0.00 0.00 36.82 1.31
668 694 6.445786 TGGGTAGACATTTTTGGTAGACCTAT 59.554 38.462 0.00 0.00 36.82 2.57
669 695 5.786457 TGGGTAGACATTTTTGGTAGACCTA 59.214 40.000 0.00 0.00 36.82 3.08
670 696 4.600111 TGGGTAGACATTTTTGGTAGACCT 59.400 41.667 0.00 0.00 36.82 3.85
671 697 4.913784 TGGGTAGACATTTTTGGTAGACC 58.086 43.478 0.00 0.00 0.00 3.85
672 698 4.941873 CCTGGGTAGACATTTTTGGTAGAC 59.058 45.833 0.00 0.00 0.00 2.59
673 699 4.847512 TCCTGGGTAGACATTTTTGGTAGA 59.152 41.667 0.00 0.00 0.00 2.59
674 700 5.174037 TCCTGGGTAGACATTTTTGGTAG 57.826 43.478 0.00 0.00 0.00 3.18
675 701 4.600111 ACTCCTGGGTAGACATTTTTGGTA 59.400 41.667 0.00 0.00 0.00 3.25
676 702 3.397955 ACTCCTGGGTAGACATTTTTGGT 59.602 43.478 0.00 0.00 0.00 3.67
677 703 3.758554 CACTCCTGGGTAGACATTTTTGG 59.241 47.826 0.00 0.00 0.00 3.28
678 704 4.398319 ACACTCCTGGGTAGACATTTTTG 58.602 43.478 0.00 0.00 0.00 2.44
679 705 4.351111 AGACACTCCTGGGTAGACATTTTT 59.649 41.667 0.00 0.00 0.00 1.94
680 706 3.910627 AGACACTCCTGGGTAGACATTTT 59.089 43.478 0.00 0.00 0.00 1.82
681 707 3.261897 CAGACACTCCTGGGTAGACATTT 59.738 47.826 0.00 0.00 0.00 2.32
682 708 2.834549 CAGACACTCCTGGGTAGACATT 59.165 50.000 0.00 0.00 0.00 2.71
683 709 2.043115 TCAGACACTCCTGGGTAGACAT 59.957 50.000 0.00 0.00 34.99 3.06
684 710 1.427753 TCAGACACTCCTGGGTAGACA 59.572 52.381 0.00 0.00 34.99 3.41
685 711 2.217510 TCAGACACTCCTGGGTAGAC 57.782 55.000 0.00 0.00 34.99 2.59
686 712 2.158370 TGTTCAGACACTCCTGGGTAGA 60.158 50.000 0.00 0.00 34.99 2.59
687 713 2.248248 TGTTCAGACACTCCTGGGTAG 58.752 52.381 0.00 0.00 34.99 3.18
688 714 2.391926 TGTTCAGACACTCCTGGGTA 57.608 50.000 0.00 0.00 34.99 3.69
689 715 1.417890 CTTGTTCAGACACTCCTGGGT 59.582 52.381 0.00 0.00 34.98 4.51
690 716 1.694150 TCTTGTTCAGACACTCCTGGG 59.306 52.381 0.00 0.00 34.98 4.45
691 717 3.070159 TCTTCTTGTTCAGACACTCCTGG 59.930 47.826 0.00 0.00 34.98 4.45
692 718 4.054671 GTCTTCTTGTTCAGACACTCCTG 58.945 47.826 0.00 0.00 39.49 3.86
693 719 3.070302 GGTCTTCTTGTTCAGACACTCCT 59.930 47.826 1.98 0.00 41.19 3.69
694 720 3.070302 AGGTCTTCTTGTTCAGACACTCC 59.930 47.826 1.98 0.00 41.19 3.85
695 721 4.329462 AGGTCTTCTTGTTCAGACACTC 57.671 45.455 1.98 0.00 41.19 3.51
696 722 4.762289 AAGGTCTTCTTGTTCAGACACT 57.238 40.909 1.98 0.00 41.19 3.55
697 723 5.819825 AAAAGGTCTTCTTGTTCAGACAC 57.180 39.130 1.98 0.00 41.19 3.67
731 757 2.111999 TTGAGGAAGGTGCACGGGAG 62.112 60.000 11.45 0.00 0.00 4.30
732 758 1.701031 TTTGAGGAAGGTGCACGGGA 61.701 55.000 11.45 0.00 0.00 5.14
733 759 0.821711 TTTTGAGGAAGGTGCACGGG 60.822 55.000 11.45 0.00 0.00 5.28
734 760 1.028905 TTTTTGAGGAAGGTGCACGG 58.971 50.000 11.45 0.00 0.00 4.94
756 782 1.388837 GGACTGGGTGCACGGTTTTT 61.389 55.000 11.45 0.00 0.00 1.94
757 783 1.826487 GGACTGGGTGCACGGTTTT 60.826 57.895 11.45 0.00 0.00 2.43
758 784 2.203294 GGACTGGGTGCACGGTTT 60.203 61.111 11.45 0.00 0.00 3.27
759 785 3.168528 AGGACTGGGTGCACGGTT 61.169 61.111 11.45 0.00 0.00 4.44
760 786 3.626924 GAGGACTGGGTGCACGGT 61.627 66.667 11.45 9.54 0.00 4.83
761 787 4.394712 GGAGGACTGGGTGCACGG 62.395 72.222 11.45 6.16 0.00 4.94
762 788 3.177194 TTGGAGGACTGGGTGCACG 62.177 63.158 11.45 0.00 0.00 5.34
984 1013 1.696988 GCATGGCGTCGTTGAAAAAT 58.303 45.000 0.00 0.00 0.00 1.82
985 1014 3.171705 GCATGGCGTCGTTGAAAAA 57.828 47.368 0.00 0.00 0.00 1.94
1024 1053 2.200092 GGCGAGGAGGAGGAGGAT 59.800 66.667 0.00 0.00 0.00 3.24
1127 1156 3.976490 ATCTGGCGACGGGGGAGAA 62.976 63.158 0.00 0.00 37.31 2.87
1150 1179 0.182299 GGAGCTCAAATGGGAGGAGG 59.818 60.000 17.19 0.00 35.41 4.30
1395 1434 4.047834 CGCACATGTGGAGTGTGT 57.952 55.556 26.55 0.00 46.59 3.72
1506 1545 3.681961 AAATTGCACGGCCGATGCG 62.682 57.895 35.90 17.84 46.49 4.73
1512 1551 0.249657 TCCAACAAAATTGCACGGCC 60.250 50.000 0.00 0.00 0.00 6.13
1539 1578 2.985896 TGGTACTGAGCTGGTTAATGC 58.014 47.619 0.00 0.00 0.00 3.56
1644 1686 6.141462 GTGTCTTTCTTCAGCAGAATTCAAG 58.859 40.000 8.44 2.27 41.42 3.02
1676 1718 5.138758 TCCTGACTACTGATAAGCCCTTA 57.861 43.478 0.00 0.00 0.00 2.69
1692 1734 2.508526 AGCAAGTGACCAAATCCTGAC 58.491 47.619 0.00 0.00 0.00 3.51
1706 1748 5.105756 GGATACCAAAACAGCATTAGCAAGT 60.106 40.000 0.00 0.00 45.49 3.16
1740 1782 6.924111 ACAAAACCAGGCTAGTAATCAAATG 58.076 36.000 0.00 0.00 0.00 2.32
1741 1783 7.539034 AACAAAACCAGGCTAGTAATCAAAT 57.461 32.000 0.00 0.00 0.00 2.32
1742 1784 6.969993 AACAAAACCAGGCTAGTAATCAAA 57.030 33.333 0.00 0.00 0.00 2.69
1758 1800 5.423886 TGGTTTGGAGGATGAAAACAAAAC 58.576 37.500 0.00 0.00 38.75 2.43
1829 2153 4.034742 ACACAACTTAAAACCACGCTGTAG 59.965 41.667 0.00 0.00 0.00 2.74
1858 2182 3.006003 GGCCCTAACTATCAGTCTGCTAC 59.994 52.174 0.00 0.00 0.00 3.58
1931 2255 5.712917 TGTTTGGGACTAAAGACTTTGTTGT 59.287 36.000 10.80 6.72 0.00 3.32
1964 2294 2.247699 TGGGTTTCAGCTCTAGCCTA 57.752 50.000 0.00 0.00 43.38 3.93
2000 2330 3.735820 GCCATGTGCAATAACCATGAGTG 60.736 47.826 14.07 1.56 38.56 3.51
2042 2403 5.449862 CCGTAAAGAGAGATCTGAAGGACTG 60.450 48.000 0.00 0.00 0.00 3.51
2096 2457 4.047822 GCTGATAATGTCAAGAGAGGTCG 58.952 47.826 0.00 0.00 36.14 4.79
2151 2512 4.399395 TTCAGCGCAGGCCTCCAG 62.399 66.667 11.47 0.00 41.24 3.86
2169 2530 2.355756 CGTCTAAGATGGTTTGGGCATG 59.644 50.000 0.00 0.00 0.00 4.06
2185 2546 3.258372 AGAAGCTTGTCCAACATCGTCTA 59.742 43.478 2.10 0.00 0.00 2.59
2423 2785 6.528537 TCCATATTGCTGCAAAAGTAACAT 57.471 33.333 20.06 2.54 32.90 2.71
2594 2956 8.162878 AGAACATATCATGCAAATTAGTGGAG 57.837 34.615 0.00 0.00 0.00 3.86
2615 2977 7.953710 GCAACATAAGAAAATGCAATTGAGAAC 59.046 33.333 10.34 0.00 36.10 3.01
2771 3134 7.914427 AGTATTACACATCCTGTAAGATCCA 57.086 36.000 0.00 0.00 46.37 3.41
2785 3148 7.094975 GGCACTTGTTGTTCATAGTATTACACA 60.095 37.037 0.00 0.00 0.00 3.72
2907 3270 3.887716 AGTAAGAAGGATCATTGCATGCC 59.112 43.478 16.68 0.00 0.00 4.40
2968 3331 5.221641 ACTCAAGTCAGCCAACATTAGTGTA 60.222 40.000 0.00 0.00 37.67 2.90
2980 3343 3.627577 TGTTGAAGAAACTCAAGTCAGCC 59.372 43.478 0.00 0.00 39.70 4.85
3033 3396 0.522626 CAGCATGCAACGGTGATGAA 59.477 50.000 21.98 0.00 33.82 2.57
3124 3487 6.609616 AGTTCAATTGAAGACCTAAAAACCCA 59.390 34.615 21.05 0.00 34.27 4.51
3157 3520 4.891992 ACTCCCCTGATCCATATAAACG 57.108 45.455 0.00 0.00 0.00 3.60
3326 3697 5.129634 TGTAATGAAAGTGGAAGCTCACAA 58.870 37.500 8.15 0.00 39.93 3.33
3493 3864 8.283291 AGTTCATCAAAGTTACTCGAATTCAAC 58.717 33.333 6.22 2.39 0.00 3.18
3514 3885 1.929230 TGCTTTTGACGACGAGTTCA 58.071 45.000 0.00 0.00 0.00 3.18
3883 4263 4.391216 TGTGAGCTCGTGTAGTCTAGTTAC 59.609 45.833 9.64 0.00 0.00 2.50
3924 4305 1.477377 CCGATGAAAGGGGATGCATCA 60.477 52.381 27.25 7.73 37.56 3.07
4016 4397 3.543656 CGTGTACGAACAGTAGGAGATCG 60.544 52.174 0.00 0.00 43.02 3.69
4110 4493 9.219603 TCAGTTAACAGGATTTATTCTCAACAG 57.780 33.333 8.61 0.00 0.00 3.16
4150 4533 2.107378 TGCCCACACCTTAGTTGATGAA 59.893 45.455 0.00 0.00 0.00 2.57
4153 4536 2.200373 GTGCCCACACCTTAGTTGAT 57.800 50.000 0.00 0.00 41.21 2.57
4547 4951 5.297776 CCCCAAAGTGATATTGCTGAGTTAG 59.702 44.000 0.00 0.00 0.00 2.34
4610 5014 4.718940 AACCATAGTTATTTGCTGCCAC 57.281 40.909 0.00 0.00 33.27 5.01
4714 5120 5.716228 TCATCATGTTAAAAAGGCACCTCAT 59.284 36.000 0.00 0.00 0.00 2.90
4774 5424 8.954350 AGTAATTCAGTTGAATCTTCTGATTGG 58.046 33.333 7.74 0.00 43.41 3.16
4817 5467 1.608590 ACACTGCCTGAAACATTTCGG 59.391 47.619 6.25 6.25 41.99 4.30
4818 5468 4.154015 TGATACACTGCCTGAAACATTTCG 59.846 41.667 0.18 0.00 40.01 3.46
4968 5618 5.105392 TCAAGGACTGCAAAAATCACAAGTT 60.105 36.000 0.00 0.00 0.00 2.66
5097 5748 2.768492 GCTGCTCCAATGCGAAGGG 61.768 63.158 0.00 0.00 35.36 3.95
5105 5756 1.748122 CGCTTCCAGCTGCTCCAAT 60.748 57.895 8.66 0.00 39.60 3.16
5126 5777 1.447317 AAACTTCAGGTGGTGCAGCG 61.447 55.000 11.91 0.00 36.92 5.18
5162 5813 6.942532 TTGTGAATATCATGAAGGCTTACC 57.057 37.500 0.00 0.00 0.00 2.85
5201 5852 8.045507 ACATCAGAACATCAATCATTCACTACT 58.954 33.333 0.00 0.00 0.00 2.57
5409 6060 7.011499 TGTAGGCTAAATTCAAGTAACTGGA 57.989 36.000 0.00 0.00 0.00 3.86
5413 6064 8.494016 ACAGATGTAGGCTAAATTCAAGTAAC 57.506 34.615 0.00 0.00 0.00 2.50
5445 6098 0.588252 ACTGCGTGCATTTCTCACAC 59.412 50.000 0.00 0.00 34.27 3.82
5455 6108 6.674519 GCTGTATTAATTAGAAACTGCGTGCA 60.675 38.462 0.00 0.00 0.00 4.57
5512 6195 5.348164 ACAAGTTGCTTCCAAATGTTACAC 58.652 37.500 1.81 0.00 32.49 2.90
5580 6263 6.639563 AGTTGCTTCCAAACAAGTTGTTAAT 58.360 32.000 21.14 4.38 40.14 1.40
5587 6270 4.535526 AACAAGTTGCTTCCAAACAAGT 57.464 36.364 1.81 0.00 31.68 3.16
5590 6273 4.264460 ACAAACAAGTTGCTTCCAAACA 57.736 36.364 1.81 0.00 41.31 2.83
5591 6274 6.902224 AATACAAACAAGTTGCTTCCAAAC 57.098 33.333 1.81 0.00 41.31 2.93
5592 6275 8.874816 GTTTAATACAAACAAGTTGCTTCCAAA 58.125 29.630 1.81 0.00 41.31 3.28
5593 6276 8.035394 TGTTTAATACAAACAAGTTGCTTCCAA 58.965 29.630 1.81 0.00 41.31 3.53
5696 6465 1.089920 CTGCAAAGCAACGCTATCCT 58.910 50.000 0.00 0.00 38.25 3.24
5709 6478 1.136695 CTGCCCAGACAAAACTGCAAA 59.863 47.619 0.00 0.00 36.67 3.68
5830 6599 1.136984 CTCGAAGGCGCTACGAAGT 59.863 57.895 19.50 0.00 40.72 3.01
5933 6702 2.206515 CTCGCTGCAGGAGACGTTCT 62.207 60.000 21.15 0.00 33.27 3.01
6009 6779 1.130186 GGTTCTGACTCTACGACCGTC 59.870 57.143 0.00 0.00 0.00 4.79
6015 6785 2.100197 TCCCATGGTTCTGACTCTACG 58.900 52.381 11.73 0.00 0.00 3.51
6018 6788 0.898320 CGTCCCATGGTTCTGACTCT 59.102 55.000 11.73 0.00 0.00 3.24
6019 6789 0.108138 CCGTCCCATGGTTCTGACTC 60.108 60.000 11.73 0.00 0.00 3.36
6024 6794 1.002134 CTTGCCGTCCCATGGTTCT 60.002 57.895 11.73 0.00 0.00 3.01
6138 6908 4.859304 TCAGTGTTCCTCTAAACGCTAA 57.141 40.909 2.83 0.00 45.63 3.09
6171 6941 7.360353 CCAAATTGTACAGTGTACACATCAGAG 60.360 40.741 31.00 17.95 0.00 3.35
6215 6986 3.750639 AACGTCGACAAAAGAAAAGCA 57.249 38.095 17.16 0.00 0.00 3.91
6232 7003 3.520290 TCTCCCACAATACTGCTAACG 57.480 47.619 0.00 0.00 0.00 3.18
6244 7015 1.980765 ACATCAGAGCTTTCTCCCACA 59.019 47.619 0.00 0.00 40.22 4.17
6277 7051 0.260230 TTTCAGGGGCAAAGACACCA 59.740 50.000 0.00 0.00 0.00 4.17
6312 7088 5.185442 TGCAATGATGGACAAGCATCTAAAA 59.815 36.000 0.00 0.00 38.18 1.52
6379 7155 5.025826 CCGTACCAAAGCGCTTAAATAAAG 58.974 41.667 25.33 12.12 38.32 1.85
6432 7212 4.880537 ATCGGCAGCCTCGCGAAG 62.881 66.667 11.33 4.96 0.00 3.79
6450 7230 2.092375 AGGGGTAGTACTGTACCGGTAC 60.092 54.545 33.42 33.42 43.21 3.34
6452 7232 1.002857 AGGGGTAGTACTGTACCGGT 58.997 55.000 13.98 13.98 43.21 5.28
6453 7233 1.341383 ACAGGGGTAGTACTGTACCGG 60.341 57.143 14.05 0.00 45.45 5.28
6459 7239 0.739561 GAGCGACAGGGGTAGTACTG 59.260 60.000 5.39 0.00 40.48 2.74
6460 7240 0.395448 GGAGCGACAGGGGTAGTACT 60.395 60.000 0.00 0.00 0.00 2.73
6461 7241 0.395448 AGGAGCGACAGGGGTAGTAC 60.395 60.000 0.00 0.00 0.00 2.73
6462 7242 0.106819 GAGGAGCGACAGGGGTAGTA 60.107 60.000 0.00 0.00 0.00 1.82
6463 7243 1.380112 GAGGAGCGACAGGGGTAGT 60.380 63.158 0.00 0.00 0.00 2.73
6464 7244 1.379977 TGAGGAGCGACAGGGGTAG 60.380 63.158 0.00 0.00 0.00 3.18
6496 7277 1.137404 CATTCTTTCGCCGGCAAGG 59.863 57.895 28.98 19.17 44.97 3.61
6497 7278 1.514873 GCATTCTTTCGCCGGCAAG 60.515 57.895 28.98 22.89 0.00 4.01
6498 7279 2.566010 GCATTCTTTCGCCGGCAA 59.434 55.556 28.98 16.98 0.00 4.52
6499 7280 3.798650 CGCATTCTTTCGCCGGCA 61.799 61.111 28.98 11.20 0.00 5.69
6500 7281 2.796245 AAACGCATTCTTTCGCCGGC 62.796 55.000 19.07 19.07 0.00 6.13
6501 7282 0.386731 AAAACGCATTCTTTCGCCGG 60.387 50.000 0.00 0.00 0.00 6.13
6502 7283 1.122323 CAAAAACGCATTCTTTCGCCG 59.878 47.619 0.00 0.00 0.00 6.46
6503 7284 2.124122 ACAAAAACGCATTCTTTCGCC 58.876 42.857 0.00 0.00 0.00 5.54
6504 7285 2.153057 GGACAAAAACGCATTCTTTCGC 59.847 45.455 0.00 0.00 0.00 4.70
6505 7286 3.367607 TGGACAAAAACGCATTCTTTCG 58.632 40.909 0.00 0.00 0.00 3.46
6506 7287 5.290885 ACTTTGGACAAAAACGCATTCTTTC 59.709 36.000 0.00 0.00 0.00 2.62
6507 7288 5.175127 ACTTTGGACAAAAACGCATTCTTT 58.825 33.333 0.00 0.00 0.00 2.52
6508 7289 4.754322 ACTTTGGACAAAAACGCATTCTT 58.246 34.783 0.00 0.00 0.00 2.52
6509 7290 4.142271 TGACTTTGGACAAAAACGCATTCT 60.142 37.500 0.00 0.00 0.00 2.40
6510 7291 4.026886 GTGACTTTGGACAAAAACGCATTC 60.027 41.667 0.00 0.00 0.00 2.67
6511 7292 3.862845 GTGACTTTGGACAAAAACGCATT 59.137 39.130 0.00 0.00 0.00 3.56
6512 7293 3.443976 GTGACTTTGGACAAAAACGCAT 58.556 40.909 0.00 0.00 0.00 4.73
6513 7294 2.416162 GGTGACTTTGGACAAAAACGCA 60.416 45.455 0.00 0.00 0.00 5.24
6514 7295 2.190161 GGTGACTTTGGACAAAAACGC 58.810 47.619 0.00 3.27 0.00 4.84
6516 7297 2.804647 CCGGTGACTTTGGACAAAAAC 58.195 47.619 0.00 0.00 0.00 2.43
6517 7298 1.135333 GCCGGTGACTTTGGACAAAAA 59.865 47.619 1.90 0.00 0.00 1.94
6519 7300 1.440938 CGCCGGTGACTTTGGACAAA 61.441 55.000 10.20 0.00 0.00 2.83
6520 7301 1.890041 CGCCGGTGACTTTGGACAA 60.890 57.895 10.20 0.00 0.00 3.18
6521 7302 2.280524 CGCCGGTGACTTTGGACA 60.281 61.111 10.20 0.00 0.00 4.02
6522 7303 2.280592 ACGCCGGTGACTTTGGAC 60.281 61.111 24.59 0.00 0.00 4.02
6524 7305 3.047877 GGACGCCGGTGACTTTGG 61.048 66.667 24.59 0.00 0.00 3.28
6538 7319 0.736325 CCTGTCAATGACGTCCGGAC 60.736 60.000 25.28 25.28 34.95 4.79
6540 7321 0.175760 ATCCTGTCAATGACGTCCGG 59.824 55.000 14.12 0.00 34.95 5.14
6550 7340 6.472887 ACTAAATTTCGAAGGATCCTGTCAA 58.527 36.000 17.02 6.71 0.00 3.18
6591 7381 9.719355 TCAGTCAACTTTAATATGCAGAGTAAA 57.281 29.630 12.75 12.75 0.00 2.01
6592 7382 9.719355 TTCAGTCAACTTTAATATGCAGAGTAA 57.281 29.630 0.00 0.00 0.00 2.24
6593 7383 9.371136 CTTCAGTCAACTTTAATATGCAGAGTA 57.629 33.333 0.00 0.00 0.00 2.59
6594 7384 7.880195 ACTTCAGTCAACTTTAATATGCAGAGT 59.120 33.333 0.00 0.00 0.00 3.24
6595 7385 8.261492 ACTTCAGTCAACTTTAATATGCAGAG 57.739 34.615 0.00 0.00 0.00 3.35
6596 7386 8.256611 GACTTCAGTCAACTTTAATATGCAGA 57.743 34.615 1.86 0.00 44.18 4.26
6612 7402 8.850452 CAAACTTAACAAACTTTGACTTCAGTC 58.150 33.333 8.55 0.00 44.97 3.51
6613 7403 8.573035 TCAAACTTAACAAACTTTGACTTCAGT 58.427 29.630 8.55 0.00 29.66 3.41
6614 7404 8.850452 GTCAAACTTAACAAACTTTGACTTCAG 58.150 33.333 8.55 0.00 44.69 3.02
6615 7405 7.810759 GGTCAAACTTAACAAACTTTGACTTCA 59.189 33.333 17.21 0.00 46.19 3.02
6616 7406 7.810759 TGGTCAAACTTAACAAACTTTGACTTC 59.189 33.333 17.21 6.71 46.19 3.01
6617 7407 7.662897 TGGTCAAACTTAACAAACTTTGACTT 58.337 30.769 17.21 0.00 46.19 3.01
6618 7408 7.222000 TGGTCAAACTTAACAAACTTTGACT 57.778 32.000 17.21 0.00 46.19 3.41
6619 7409 7.876896 TTGGTCAAACTTAACAAACTTTGAC 57.123 32.000 8.55 11.83 46.21 3.18
6682 7472 9.040939 CGTTGAATGTACTTCCACATCATATAA 57.959 33.333 0.00 0.00 38.19 0.98
6683 7473 8.417884 TCGTTGAATGTACTTCCACATCATATA 58.582 33.333 0.00 0.00 38.19 0.86
6684 7474 7.272244 TCGTTGAATGTACTTCCACATCATAT 58.728 34.615 0.00 0.00 38.19 1.78
6685 7475 6.635755 TCGTTGAATGTACTTCCACATCATA 58.364 36.000 0.00 0.00 38.19 2.15
6686 7476 5.487433 TCGTTGAATGTACTTCCACATCAT 58.513 37.500 0.00 0.00 38.19 2.45
6687 7477 4.888917 TCGTTGAATGTACTTCCACATCA 58.111 39.130 0.00 0.00 38.19 3.07
6688 7478 5.580691 TCATCGTTGAATGTACTTCCACATC 59.419 40.000 0.00 0.00 38.19 3.06
6689 7479 5.487433 TCATCGTTGAATGTACTTCCACAT 58.513 37.500 0.00 0.00 40.90 3.21
6690 7480 4.888917 TCATCGTTGAATGTACTTCCACA 58.111 39.130 0.00 0.00 30.69 4.17
6691 7481 5.856126 TTCATCGTTGAATGTACTTCCAC 57.144 39.130 4.80 0.00 36.94 4.02
6702 7492 6.601217 TCAATACCATTGGATTCATCGTTGAA 59.399 34.615 10.37 11.13 45.57 2.69
6703 7493 6.038161 GTCAATACCATTGGATTCATCGTTGA 59.962 38.462 10.37 5.06 0.00 3.18
6704 7494 6.038603 AGTCAATACCATTGGATTCATCGTTG 59.961 38.462 10.37 2.99 0.00 4.10
6705 7495 6.122277 AGTCAATACCATTGGATTCATCGTT 58.878 36.000 10.37 0.00 0.00 3.85
6706 7496 5.684704 AGTCAATACCATTGGATTCATCGT 58.315 37.500 10.37 0.00 0.00 3.73
6707 7497 6.038603 ACAAGTCAATACCATTGGATTCATCG 59.961 38.462 10.37 0.00 0.00 3.84
6708 7498 7.338800 ACAAGTCAATACCATTGGATTCATC 57.661 36.000 10.37 0.00 0.00 2.92
6709 7499 7.722949 AACAAGTCAATACCATTGGATTCAT 57.277 32.000 10.37 0.00 0.00 2.57
6710 7500 8.821686 ATAACAAGTCAATACCATTGGATTCA 57.178 30.769 10.37 0.00 0.00 2.57
6711 7501 9.520204 CAATAACAAGTCAATACCATTGGATTC 57.480 33.333 10.37 0.00 0.00 2.52
6712 7502 9.034800 ACAATAACAAGTCAATACCATTGGATT 57.965 29.630 10.37 2.30 0.00 3.01
6713 7503 8.593945 ACAATAACAAGTCAATACCATTGGAT 57.406 30.769 10.37 0.00 0.00 3.41
6714 7504 9.693739 ATACAATAACAAGTCAATACCATTGGA 57.306 29.630 10.37 0.00 0.00 3.53
6765 7555 8.770438 AGTCAAGCTTTGTAAATTTTGACAAA 57.230 26.923 22.19 15.19 41.90 2.83
6766 7556 8.770438 AAGTCAAGCTTTGTAAATTTTGACAA 57.230 26.923 22.19 9.43 40.17 3.18
6767 7557 8.770438 AAAGTCAAGCTTTGTAAATTTTGACA 57.230 26.923 22.19 4.38 45.00 3.58
6790 7580 4.265893 TCCGCATATTAGCTTTGGTCAAA 58.734 39.130 0.00 0.00 0.00 2.69
6791 7581 3.879998 TCCGCATATTAGCTTTGGTCAA 58.120 40.909 0.00 0.00 0.00 3.18
6792 7582 3.552132 TCCGCATATTAGCTTTGGTCA 57.448 42.857 0.00 0.00 0.00 4.02
6793 7583 6.554334 TTATTCCGCATATTAGCTTTGGTC 57.446 37.500 0.00 0.00 0.00 4.02
6794 7584 6.952773 TTTATTCCGCATATTAGCTTTGGT 57.047 33.333 0.00 0.00 0.00 3.67
6795 7585 9.906660 TTTATTTATTCCGCATATTAGCTTTGG 57.093 29.630 0.00 0.00 0.00 3.28
6799 7589 9.607285 CGTTTTTATTTATTCCGCATATTAGCT 57.393 29.630 0.00 0.00 0.00 3.32
6800 7590 8.846607 CCGTTTTTATTTATTCCGCATATTAGC 58.153 33.333 0.00 0.00 0.00 3.09
6803 7593 8.079809 CCTCCGTTTTTATTTATTCCGCATATT 58.920 33.333 0.00 0.00 0.00 1.28
6804 7594 7.308951 CCCTCCGTTTTTATTTATTCCGCATAT 60.309 37.037 0.00 0.00 0.00 1.78
6805 7595 6.016943 CCCTCCGTTTTTATTTATTCCGCATA 60.017 38.462 0.00 0.00 0.00 3.14
6806 7596 5.221165 CCCTCCGTTTTTATTTATTCCGCAT 60.221 40.000 0.00 0.00 0.00 4.73
6807 7597 4.096682 CCCTCCGTTTTTATTTATTCCGCA 59.903 41.667 0.00 0.00 0.00 5.69
6808 7598 4.336153 TCCCTCCGTTTTTATTTATTCCGC 59.664 41.667 0.00 0.00 0.00 5.54
6809 7599 5.587443 ACTCCCTCCGTTTTTATTTATTCCG 59.413 40.000 0.00 0.00 0.00 4.30
6810 7600 7.553760 TGTACTCCCTCCGTTTTTATTTATTCC 59.446 37.037 0.00 0.00 0.00 3.01
6811 7601 8.393366 GTGTACTCCCTCCGTTTTTATTTATTC 58.607 37.037 0.00 0.00 0.00 1.75
6812 7602 7.064966 CGTGTACTCCCTCCGTTTTTATTTATT 59.935 37.037 0.00 0.00 0.00 1.40
6813 7603 6.536224 CGTGTACTCCCTCCGTTTTTATTTAT 59.464 38.462 0.00 0.00 0.00 1.40
6814 7604 5.868801 CGTGTACTCCCTCCGTTTTTATTTA 59.131 40.000 0.00 0.00 0.00 1.40
6815 7605 4.692155 CGTGTACTCCCTCCGTTTTTATTT 59.308 41.667 0.00 0.00 0.00 1.40
6816 7606 4.248058 CGTGTACTCCCTCCGTTTTTATT 58.752 43.478 0.00 0.00 0.00 1.40
6817 7607 3.368739 CCGTGTACTCCCTCCGTTTTTAT 60.369 47.826 0.00 0.00 0.00 1.40
6818 7608 2.029110 CCGTGTACTCCCTCCGTTTTTA 60.029 50.000 0.00 0.00 0.00 1.52
6819 7609 1.270465 CCGTGTACTCCCTCCGTTTTT 60.270 52.381 0.00 0.00 0.00 1.94
6820 7610 0.319405 CCGTGTACTCCCTCCGTTTT 59.681 55.000 0.00 0.00 0.00 2.43
6821 7611 1.969862 CCGTGTACTCCCTCCGTTT 59.030 57.895 0.00 0.00 0.00 3.60
6822 7612 2.643232 GCCGTGTACTCCCTCCGTT 61.643 63.158 0.00 0.00 0.00 4.44
6823 7613 3.066814 GCCGTGTACTCCCTCCGT 61.067 66.667 0.00 0.00 0.00 4.69
6824 7614 1.033746 TAAGCCGTGTACTCCCTCCG 61.034 60.000 0.00 0.00 0.00 4.63
6825 7615 1.411041 ATAAGCCGTGTACTCCCTCC 58.589 55.000 0.00 0.00 0.00 4.30
6826 7616 4.660789 TTTATAAGCCGTGTACTCCCTC 57.339 45.455 0.00 0.00 0.00 4.30
6827 7617 5.365895 AGATTTTATAAGCCGTGTACTCCCT 59.634 40.000 0.00 0.00 0.00 4.20
6828 7618 5.608449 AGATTTTATAAGCCGTGTACTCCC 58.392 41.667 0.00 0.00 0.00 4.30
6829 7619 6.514063 AGAGATTTTATAAGCCGTGTACTCC 58.486 40.000 0.00 0.00 0.00 3.85
6830 7620 7.201145 TGAGAGATTTTATAAGCCGTGTACTC 58.799 38.462 0.00 0.00 0.00 2.59
6831 7621 7.108841 TGAGAGATTTTATAAGCCGTGTACT 57.891 36.000 0.00 0.00 0.00 2.73
6832 7622 6.979238 ACTGAGAGATTTTATAAGCCGTGTAC 59.021 38.462 0.00 0.00 0.00 2.90
6833 7623 7.108841 ACTGAGAGATTTTATAAGCCGTGTA 57.891 36.000 0.00 0.00 0.00 2.90
6834 7624 5.978814 ACTGAGAGATTTTATAAGCCGTGT 58.021 37.500 0.00 0.00 0.00 4.49
6835 7625 6.642950 CCTACTGAGAGATTTTATAAGCCGTG 59.357 42.308 0.00 0.00 0.00 4.94
6836 7626 6.739008 GCCTACTGAGAGATTTTATAAGCCGT 60.739 42.308 0.00 0.00 0.00 5.68
6837 7627 5.635700 GCCTACTGAGAGATTTTATAAGCCG 59.364 44.000 0.00 0.00 0.00 5.52
6838 7628 6.764379 AGCCTACTGAGAGATTTTATAAGCC 58.236 40.000 0.00 0.00 0.00 4.35
6872 7662 5.053145 CCTTGACAAGATAATTCTCCGGAG 58.947 45.833 26.32 26.32 0.00 4.63
6873 7663 4.714802 TCCTTGACAAGATAATTCTCCGGA 59.285 41.667 16.99 2.93 0.00 5.14
6874 7664 5.023533 TCCTTGACAAGATAATTCTCCGG 57.976 43.478 16.99 0.00 0.00 5.14
6875 7665 6.256757 GTCTTCCTTGACAAGATAATTCTCCG 59.743 42.308 16.99 0.00 36.97 4.63
6876 7666 7.334858 AGTCTTCCTTGACAAGATAATTCTCC 58.665 38.462 16.99 0.00 39.27 3.71
6877 7667 7.221838 CGAGTCTTCCTTGACAAGATAATTCTC 59.778 40.741 16.99 15.75 39.27 2.87
6878 7668 7.038659 CGAGTCTTCCTTGACAAGATAATTCT 58.961 38.462 16.99 10.45 39.27 2.40
6879 7669 6.814146 ACGAGTCTTCCTTGACAAGATAATTC 59.186 38.462 16.99 6.22 39.27 2.17
6899 7689 1.202580 ACTTTCTCAAGCAGCACGAGT 60.203 47.619 10.10 0.00 32.57 4.18
6905 7695 1.458827 CTCGTCACTTTCTCAAGCAGC 59.541 52.381 0.00 0.00 32.57 5.25
6921 7711 8.975295 ACATCCCTAGTTTAAATAGTAACTCGT 58.025 33.333 0.00 0.00 36.16 4.18
6935 7725 6.010219 ACTGTGCAATAAACATCCCTAGTTT 58.990 36.000 0.00 0.00 41.63 2.66
6958 7748 1.302033 CTGGGTGGAGTGAGTGCAC 60.302 63.158 9.40 9.40 46.52 4.57
6963 7753 0.894141 CTGTCTCTGGGTGGAGTGAG 59.106 60.000 0.00 0.00 35.11 3.51
6970 7760 0.320247 GAGTGCACTGTCTCTGGGTG 60.320 60.000 27.27 0.00 0.00 4.61
6971 7761 1.810606 CGAGTGCACTGTCTCTGGGT 61.811 60.000 27.27 0.00 0.00 4.51
6972 7762 1.080230 CGAGTGCACTGTCTCTGGG 60.080 63.158 27.27 0.00 0.00 4.45
6973 7763 1.735920 GCGAGTGCACTGTCTCTGG 60.736 63.158 27.27 1.04 42.15 3.86
6975 7765 2.653702 GGCGAGTGCACTGTCTCT 59.346 61.111 27.27 0.00 45.35 3.10
6976 7766 2.433318 GGGCGAGTGCACTGTCTC 60.433 66.667 27.27 11.75 42.93 3.36
7005 8010 0.539986 TTCTGACCGTATGCTTCCCC 59.460 55.000 0.00 0.00 0.00 4.81
7009 8014 2.028112 TCTTGCTTCTGACCGTATGCTT 60.028 45.455 0.00 0.00 0.00 3.91
7011 8016 2.010145 TCTTGCTTCTGACCGTATGC 57.990 50.000 0.00 0.00 0.00 3.14
7012 8017 2.286294 GCATCTTGCTTCTGACCGTATG 59.714 50.000 0.00 0.00 40.96 2.39
7013 8018 2.093500 TGCATCTTGCTTCTGACCGTAT 60.093 45.455 0.75 0.00 45.31 3.06
7014 8019 1.275010 TGCATCTTGCTTCTGACCGTA 59.725 47.619 0.75 0.00 45.31 4.02
7015 8020 0.035317 TGCATCTTGCTTCTGACCGT 59.965 50.000 0.75 0.00 45.31 4.83
7016 8021 0.725686 CTGCATCTTGCTTCTGACCG 59.274 55.000 0.75 0.00 45.31 4.79
7017 8022 1.818642 ACTGCATCTTGCTTCTGACC 58.181 50.000 0.75 0.00 45.31 4.02
7018 8023 5.362556 TTTTACTGCATCTTGCTTCTGAC 57.637 39.130 0.75 0.00 45.31 3.51
7019 8024 5.532406 AGTTTTTACTGCATCTTGCTTCTGA 59.468 36.000 0.75 0.00 45.31 3.27
7020 8025 5.766222 AGTTTTTACTGCATCTTGCTTCTG 58.234 37.500 0.75 0.00 45.31 3.02
7022 8027 5.762045 TGAGTTTTTACTGCATCTTGCTTC 58.238 37.500 0.75 0.00 45.31 3.86
7030 8035 7.624344 GCGATTTCTACTGAGTTTTTACTGCAT 60.624 37.037 0.00 0.00 0.00 3.96
7044 8049 9.559958 AAAACATAATCAAAGCGATTTCTACTG 57.440 29.630 0.00 0.00 41.83 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.