Multiple sequence alignment - TraesCS5A01G232200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G232200 chr5A 100.000 3448 0 0 1 3448 447539571 447543018 0.000000e+00 6368.0
1 TraesCS5A01G232200 chr5A 90.066 302 25 4 3148 3447 330514677 330514379 1.500000e-103 387.0
2 TraesCS5A01G232200 chr5A 88.424 311 29 7 3140 3447 457092979 457092673 5.440000e-98 368.0
3 TraesCS5A01G232200 chr5A 100.000 28 0 0 3026 3053 444531598 444531571 6.000000e-03 52.8
4 TraesCS5A01G232200 chr5A 88.372 43 5 0 3011 3053 526395770 526395812 6.000000e-03 52.8
5 TraesCS5A01G232200 chr5B 88.131 1466 90 42 1591 3013 407236046 407237470 0.000000e+00 1666.0
6 TraesCS5A01G232200 chr5B 86.076 1027 56 32 741 1727 407235083 407236062 0.000000e+00 1024.0
7 TraesCS5A01G232200 chr5B 91.603 262 11 7 1 259 407219766 407220019 5.480000e-93 351.0
8 TraesCS5A01G232200 chr5B 100.000 28 0 0 3026 3053 403707052 403707025 6.000000e-03 52.8
9 TraesCS5A01G232200 chr5D 87.580 1095 45 21 678 1727 344541257 344540209 0.000000e+00 1184.0
10 TraesCS5A01G232200 chr5D 91.943 844 49 9 1591 2430 344540225 344539397 0.000000e+00 1164.0
11 TraesCS5A01G232200 chr5D 88.983 590 44 16 2433 3013 344539363 344538786 0.000000e+00 710.0
12 TraesCS5A01G232200 chr5D 89.404 302 24 6 3148 3447 277135522 277135227 1.170000e-99 374.0
13 TraesCS5A01G232200 chr5D 88.816 304 30 4 3147 3447 512393387 512393689 1.510000e-98 370.0
14 TraesCS5A01G232200 chr5D 80.038 521 42 31 1 474 344542384 344541879 2.570000e-86 329.0
15 TraesCS5A01G232200 chr5D 93.750 96 6 0 464 559 344541534 344541439 9.970000e-31 145.0
16 TraesCS5A01G232200 chr5D 94.286 35 1 1 3026 3059 347445469 347445503 6.000000e-03 52.8
17 TraesCS5A01G232200 chr7D 92.953 298 18 3 3148 3442 193990666 193990963 6.840000e-117 431.0
18 TraesCS5A01G232200 chr7D 90.429 303 26 3 3148 3447 578817968 578817666 2.490000e-106 396.0
19 TraesCS5A01G232200 chr3D 90.759 303 23 5 3148 3447 4392736 4393036 1.930000e-107 399.0
20 TraesCS5A01G232200 chr3B 90.461 304 25 4 3145 3446 592691629 592691930 6.930000e-107 398.0
21 TraesCS5A01G232200 chr2D 87.812 320 32 7 3133 3447 342554044 342554361 5.440000e-98 368.0
22 TraesCS5A01G232200 chr2D 85.714 77 6 5 3007 3081 55356085 55356012 3.690000e-10 76.8
23 TraesCS5A01G232200 chr2D 91.379 58 1 4 3026 3081 635818364 635818419 3.690000e-10 76.8
24 TraesCS5A01G232200 chr4A 88.525 61 3 4 3023 3081 539293922 539293980 1.720000e-08 71.3
25 TraesCS5A01G232200 chr4A 86.441 59 5 3 3024 3081 668459074 668459018 1.030000e-05 62.1
26 TraesCS5A01G232200 chr1A 92.308 39 3 0 3016 3054 49259274 49259312 4.810000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G232200 chr5A 447539571 447543018 3447 False 6368.0 6368 100.0000 1 3448 1 chr5A.!!$F1 3447
1 TraesCS5A01G232200 chr5B 407235083 407237470 2387 False 1345.0 1666 87.1035 741 3013 2 chr5B.!!$F2 2272
2 TraesCS5A01G232200 chr5D 344538786 344542384 3598 True 706.4 1184 88.4588 1 3013 5 chr5D.!!$R2 3012

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
590 1039 0.248907 GCGCCTGAAGATGTACGCTA 60.249 55.0 0.0 0.0 42.81 4.26 F
1050 1558 0.178932 TATCGGGGACATGGAGGAGG 60.179 60.0 0.0 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1775 2445 0.031314 CATCATCGGAGTCGGAGTGG 59.969 60.0 6.55 0.0 36.95 4.00 R
2874 3591 0.247419 CGTCGATCAATGTGTGCTGC 60.247 55.0 0.00 0.0 0.00 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 51 1.066430 CCTGGCTAGCTTGGTTACGAA 60.066 52.381 15.72 0.00 0.00 3.85
52 54 2.038033 TGGCTAGCTTGGTTACGAAGTT 59.962 45.455 15.72 5.45 37.78 2.66
53 55 3.072211 GGCTAGCTTGGTTACGAAGTTT 58.928 45.455 15.72 1.29 37.78 2.66
54 56 3.120304 GGCTAGCTTGGTTACGAAGTTTG 60.120 47.826 15.72 5.25 37.78 2.93
55 57 3.667166 GCTAGCTTGGTTACGAAGTTTGC 60.667 47.826 7.70 12.61 37.78 3.68
56 58 2.294074 AGCTTGGTTACGAAGTTTGCA 58.706 42.857 8.76 0.00 37.78 4.08
57 59 2.685897 AGCTTGGTTACGAAGTTTGCAA 59.314 40.909 8.76 0.00 37.78 4.08
58 60 3.129638 AGCTTGGTTACGAAGTTTGCAAA 59.870 39.130 8.05 8.05 37.78 3.68
81 83 4.299586 TGCAACCCACTGATCTTATTGA 57.700 40.909 0.00 0.00 0.00 2.57
82 84 4.858850 TGCAACCCACTGATCTTATTGAT 58.141 39.130 0.00 0.00 38.27 2.57
84 86 6.422333 TGCAACCCACTGATCTTATTGATTA 58.578 36.000 0.00 0.00 35.14 1.75
86 88 7.560991 TGCAACCCACTGATCTTATTGATTAAT 59.439 33.333 0.00 0.00 35.14 1.40
88 90 9.956720 CAACCCACTGATCTTATTGATTAATTC 57.043 33.333 0.00 0.00 35.14 2.17
89 91 8.383318 ACCCACTGATCTTATTGATTAATTCG 57.617 34.615 0.00 0.00 35.14 3.34
91 93 7.445402 CCCACTGATCTTATTGATTAATTCGGT 59.555 37.037 0.00 0.00 35.14 4.69
92 94 8.499162 CCACTGATCTTATTGATTAATTCGGTC 58.501 37.037 0.00 0.00 35.14 4.79
135 139 4.840271 TGACATCTTCACATCAATCTGCT 58.160 39.130 0.00 0.00 0.00 4.24
136 140 5.981174 TGACATCTTCACATCAATCTGCTA 58.019 37.500 0.00 0.00 0.00 3.49
137 141 6.408869 TGACATCTTCACATCAATCTGCTAA 58.591 36.000 0.00 0.00 0.00 3.09
143 149 6.936335 TCTTCACATCAATCTGCTAACAAAGA 59.064 34.615 0.00 0.00 0.00 2.52
180 186 2.186384 GCAGGAGCTGTCTGCGAT 59.814 61.111 18.95 0.00 46.33 4.58
181 187 1.449246 GCAGGAGCTGTCTGCGATT 60.449 57.895 18.95 0.00 46.33 3.34
207 213 1.792367 TCAGTGTGACGATGAAAAGCG 59.208 47.619 0.00 0.00 0.00 4.68
218 224 3.354920 CGATGAAAAGCGTCAAAGTTTCG 59.645 43.478 0.00 0.00 33.58 3.46
259 305 6.128138 AGCTCCATAGTGTTCTTACCTTTT 57.872 37.500 0.00 0.00 0.00 2.27
260 306 7.253905 AGCTCCATAGTGTTCTTACCTTTTA 57.746 36.000 0.00 0.00 0.00 1.52
261 307 7.862675 AGCTCCATAGTGTTCTTACCTTTTAT 58.137 34.615 0.00 0.00 0.00 1.40
262 308 7.988028 AGCTCCATAGTGTTCTTACCTTTTATC 59.012 37.037 0.00 0.00 0.00 1.75
263 309 7.226918 GCTCCATAGTGTTCTTACCTTTTATCC 59.773 40.741 0.00 0.00 0.00 2.59
264 310 7.270047 TCCATAGTGTTCTTACCTTTTATCCG 58.730 38.462 0.00 0.00 0.00 4.18
265 311 7.046033 CCATAGTGTTCTTACCTTTTATCCGT 58.954 38.462 0.00 0.00 0.00 4.69
266 312 7.551617 CCATAGTGTTCTTACCTTTTATCCGTT 59.448 37.037 0.00 0.00 0.00 4.44
267 313 8.943002 CATAGTGTTCTTACCTTTTATCCGTTT 58.057 33.333 0.00 0.00 0.00 3.60
269 315 8.907222 AGTGTTCTTACCTTTTATCCGTTTAA 57.093 30.769 0.00 0.00 0.00 1.52
270 316 9.341078 AGTGTTCTTACCTTTTATCCGTTTAAA 57.659 29.630 0.00 0.00 0.00 1.52
271 317 9.949174 GTGTTCTTACCTTTTATCCGTTTAAAA 57.051 29.630 0.00 1.37 31.91 1.52
312 358 1.305549 CCCAGGCAGCCCTTGAAAT 60.306 57.895 8.22 0.00 40.33 2.17
315 361 2.178580 CCAGGCAGCCCTTGAAATAAA 58.821 47.619 8.22 0.00 40.33 1.40
316 362 2.566724 CCAGGCAGCCCTTGAAATAAAA 59.433 45.455 8.22 0.00 40.33 1.52
343 390 2.644151 AGTTCAATACCAAGGACCCCT 58.356 47.619 0.00 0.00 33.87 4.79
344 391 2.993863 AGTTCAATACCAAGGACCCCTT 59.006 45.455 0.00 0.00 45.88 3.95
345 392 3.010250 AGTTCAATACCAAGGACCCCTTC 59.990 47.826 0.00 0.00 42.67 3.46
346 393 2.929301 TCAATACCAAGGACCCCTTCT 58.071 47.619 0.00 0.00 42.67 2.85
347 394 2.844348 TCAATACCAAGGACCCCTTCTC 59.156 50.000 0.00 0.00 42.67 2.87
348 395 2.576191 CAATACCAAGGACCCCTTCTCA 59.424 50.000 0.00 0.00 42.67 3.27
349 396 2.661176 TACCAAGGACCCCTTCTCAT 57.339 50.000 0.00 0.00 42.67 2.90
350 397 2.661176 ACCAAGGACCCCTTCTCATA 57.339 50.000 0.00 0.00 42.67 2.15
351 398 2.482494 ACCAAGGACCCCTTCTCATAG 58.518 52.381 0.00 0.00 42.67 2.23
352 399 2.045885 ACCAAGGACCCCTTCTCATAGA 59.954 50.000 0.00 0.00 42.67 1.98
364 434 6.471146 CCCTTCTCATAGATTTTCATCGGAT 58.529 40.000 0.00 0.00 34.17 4.18
394 464 4.143179 GGTTGTTCCTCGTGAAAATCTACG 60.143 45.833 0.00 0.00 41.38 3.51
403 473 3.930229 CGTGAAAATCTACGAACATCCCA 59.070 43.478 0.00 0.00 42.54 4.37
413 483 6.806751 TCTACGAACATCCCAAGAATCTAAG 58.193 40.000 0.00 0.00 0.00 2.18
415 485 6.049955 ACGAACATCCCAAGAATCTAAGAA 57.950 37.500 0.00 0.00 0.00 2.52
416 486 6.472887 ACGAACATCCCAAGAATCTAAGAAA 58.527 36.000 0.00 0.00 0.00 2.52
417 487 7.112779 ACGAACATCCCAAGAATCTAAGAAAT 58.887 34.615 0.00 0.00 0.00 2.17
419 489 7.497249 CGAACATCCCAAGAATCTAAGAAATCT 59.503 37.037 0.00 0.00 0.00 2.40
527 960 2.253392 CTTGTGAAGCTCCGAAATGC 57.747 50.000 0.00 0.00 0.00 3.56
528 961 0.881118 TTGTGAAGCTCCGAAATGCC 59.119 50.000 0.00 0.00 0.00 4.40
537 970 2.485122 CGAAATGCCCTGCGGTTC 59.515 61.111 0.00 0.00 0.00 3.62
547 980 1.442520 CTGCGGTTCGGCAACATTG 60.443 57.895 6.52 0.00 43.39 2.82
589 1038 1.519455 GCGCCTGAAGATGTACGCT 60.519 57.895 0.00 0.00 42.81 5.07
590 1039 0.248907 GCGCCTGAAGATGTACGCTA 60.249 55.000 0.00 0.00 42.81 4.26
591 1040 1.603172 GCGCCTGAAGATGTACGCTAT 60.603 52.381 0.00 0.00 42.81 2.97
592 1041 2.743938 CGCCTGAAGATGTACGCTATT 58.256 47.619 0.00 0.00 0.00 1.73
593 1042 3.123804 CGCCTGAAGATGTACGCTATTT 58.876 45.455 0.00 0.00 0.00 1.40
594 1043 3.555956 CGCCTGAAGATGTACGCTATTTT 59.444 43.478 0.00 0.00 0.00 1.82
595 1044 4.318121 CGCCTGAAGATGTACGCTATTTTC 60.318 45.833 0.00 0.00 0.00 2.29
598 1047 5.235186 CCTGAAGATGTACGCTATTTTCCTG 59.765 44.000 0.00 0.00 0.00 3.86
599 1048 5.730550 TGAAGATGTACGCTATTTTCCTGT 58.269 37.500 0.00 0.00 0.00 4.00
602 1051 7.985184 TGAAGATGTACGCTATTTTCCTGTAAT 59.015 33.333 0.00 0.00 0.00 1.89
603 1052 9.472361 GAAGATGTACGCTATTTTCCTGTAATA 57.528 33.333 0.00 0.00 0.00 0.98
604 1053 9.826574 AAGATGTACGCTATTTTCCTGTAATAA 57.173 29.630 0.00 0.00 0.00 1.40
626 1075 5.957842 AAAAACGTGAAGATATGAAGCCA 57.042 34.783 0.00 0.00 0.00 4.75
627 1076 5.957842 AAAACGTGAAGATATGAAGCCAA 57.042 34.783 0.00 0.00 0.00 4.52
628 1077 6.515272 AAAACGTGAAGATATGAAGCCAAT 57.485 33.333 0.00 0.00 0.00 3.16
629 1078 5.741388 AACGTGAAGATATGAAGCCAATC 57.259 39.130 0.00 0.00 0.00 2.67
631 1080 4.141620 ACGTGAAGATATGAAGCCAATCCT 60.142 41.667 0.00 0.00 0.00 3.24
632 1081 4.818546 CGTGAAGATATGAAGCCAATCCTT 59.181 41.667 0.00 0.00 0.00 3.36
633 1082 5.297776 CGTGAAGATATGAAGCCAATCCTTT 59.702 40.000 0.00 0.00 0.00 3.11
634 1083 6.501781 GTGAAGATATGAAGCCAATCCTTTG 58.498 40.000 0.00 0.00 0.00 2.77
635 1084 6.319658 GTGAAGATATGAAGCCAATCCTTTGA 59.680 38.462 0.00 0.00 34.60 2.69
636 1085 6.891361 TGAAGATATGAAGCCAATCCTTTGAA 59.109 34.615 0.00 0.00 34.60 2.69
638 1087 3.881937 ATGAAGCCAATCCTTTGAAGC 57.118 42.857 0.00 0.00 34.60 3.86
639 1088 1.895131 TGAAGCCAATCCTTTGAAGCC 59.105 47.619 0.00 0.00 34.60 4.35
640 1089 1.895131 GAAGCCAATCCTTTGAAGCCA 59.105 47.619 0.00 0.00 34.60 4.75
642 1091 1.829222 AGCCAATCCTTTGAAGCCATG 59.171 47.619 0.00 0.00 34.60 3.66
645 1094 3.853475 CCAATCCTTTGAAGCCATGTTC 58.147 45.455 0.00 0.00 34.60 3.18
646 1095 3.512724 CCAATCCTTTGAAGCCATGTTCT 59.487 43.478 0.00 0.00 34.60 3.01
647 1096 4.491676 CAATCCTTTGAAGCCATGTTCTG 58.508 43.478 0.00 0.00 34.60 3.02
648 1097 3.228188 TCCTTTGAAGCCATGTTCTGT 57.772 42.857 0.00 0.00 0.00 3.41
649 1098 3.565307 TCCTTTGAAGCCATGTTCTGTT 58.435 40.909 0.00 0.00 0.00 3.16
650 1099 3.960102 TCCTTTGAAGCCATGTTCTGTTT 59.040 39.130 0.00 0.00 0.00 2.83
651 1100 4.405358 TCCTTTGAAGCCATGTTCTGTTTT 59.595 37.500 0.00 0.00 0.00 2.43
652 1101 4.746611 CCTTTGAAGCCATGTTCTGTTTTC 59.253 41.667 0.00 0.00 0.00 2.29
653 1102 5.452356 CCTTTGAAGCCATGTTCTGTTTTCT 60.452 40.000 0.00 0.00 0.00 2.52
654 1103 6.239008 CCTTTGAAGCCATGTTCTGTTTTCTA 60.239 38.462 0.00 0.00 0.00 2.10
655 1104 6.899393 TTGAAGCCATGTTCTGTTTTCTAT 57.101 33.333 0.00 0.00 0.00 1.98
656 1105 6.899393 TGAAGCCATGTTCTGTTTTCTATT 57.101 33.333 0.00 0.00 0.00 1.73
657 1106 6.913170 TGAAGCCATGTTCTGTTTTCTATTC 58.087 36.000 0.00 0.00 0.00 1.75
658 1107 5.904362 AGCCATGTTCTGTTTTCTATTCC 57.096 39.130 0.00 0.00 0.00 3.01
660 1109 6.721318 AGCCATGTTCTGTTTTCTATTCCTA 58.279 36.000 0.00 0.00 0.00 2.94
661 1110 6.599638 AGCCATGTTCTGTTTTCTATTCCTAC 59.400 38.462 0.00 0.00 0.00 3.18
662 1111 6.456988 GCCATGTTCTGTTTTCTATTCCTACG 60.457 42.308 0.00 0.00 0.00 3.51
663 1112 6.594159 CCATGTTCTGTTTTCTATTCCTACGT 59.406 38.462 0.00 0.00 0.00 3.57
665 1114 7.647907 TGTTCTGTTTTCTATTCCTACGTTC 57.352 36.000 0.00 0.00 0.00 3.95
666 1115 6.364165 TGTTCTGTTTTCTATTCCTACGTTCG 59.636 38.462 0.00 0.00 0.00 3.95
667 1116 6.258230 TCTGTTTTCTATTCCTACGTTCGA 57.742 37.500 0.00 0.00 0.00 3.71
669 1118 7.147312 TCTGTTTTCTATTCCTACGTTCGAAA 58.853 34.615 0.00 0.00 0.00 3.46
671 1120 7.566709 TGTTTTCTATTCCTACGTTCGAAAAC 58.433 34.615 15.00 15.00 44.11 2.43
683 1132 3.810148 CGAAAACGTCGCAGGAAAA 57.190 47.368 0.00 0.00 44.14 2.29
684 1133 2.093972 CGAAAACGTCGCAGGAAAAA 57.906 45.000 0.00 0.00 44.14 1.94
723 1219 1.135315 CCATTGAAACTCCTGCGCG 59.865 57.895 0.00 0.00 0.00 6.86
742 1250 2.226437 GCGAAATCTCTTTGTTCTGGCA 59.774 45.455 0.00 0.00 0.00 4.92
746 1254 5.447010 CGAAATCTCTTTGTTCTGGCAGATC 60.447 44.000 19.50 17.98 0.00 2.75
794 1302 3.191539 CGCCTGAGCCGAGAAAGC 61.192 66.667 0.00 0.00 34.57 3.51
818 1326 1.598882 TGCGTGAACAGCCACATAAA 58.401 45.000 0.00 0.00 36.89 1.40
819 1327 1.950216 TGCGTGAACAGCCACATAAAA 59.050 42.857 0.00 0.00 36.89 1.52
873 1381 8.129211 AGCGAAGGTTCATTAATTAAACTATGC 58.871 33.333 12.50 12.50 27.67 3.14
905 1413 1.201647 TCGGGCTCTTTCTTAGTCACG 59.798 52.381 0.00 0.00 0.00 4.35
949 1457 1.562783 AAGGGACGAGGAGAAAGGAG 58.437 55.000 0.00 0.00 0.00 3.69
980 1488 2.417933 GAGCCAGCACAACAATCACTAG 59.582 50.000 0.00 0.00 0.00 2.57
981 1489 2.038952 AGCCAGCACAACAATCACTAGA 59.961 45.455 0.00 0.00 0.00 2.43
982 1490 2.417933 GCCAGCACAACAATCACTAGAG 59.582 50.000 0.00 0.00 0.00 2.43
983 1491 3.866066 GCCAGCACAACAATCACTAGAGA 60.866 47.826 0.00 0.00 0.00 3.10
984 1492 3.681897 CCAGCACAACAATCACTAGAGAC 59.318 47.826 0.00 0.00 0.00 3.36
985 1493 4.562347 CCAGCACAACAATCACTAGAGACT 60.562 45.833 0.00 0.00 0.00 3.24
995 1503 2.158928 TCACTAGAGACTAGACCGAGCC 60.159 54.545 11.94 0.00 0.00 4.70
1050 1558 0.178932 TATCGGGGACATGGAGGAGG 60.179 60.000 0.00 0.00 0.00 4.30
1051 1559 1.961381 ATCGGGGACATGGAGGAGGA 61.961 60.000 0.00 0.00 0.00 3.71
1052 1560 2.136878 CGGGGACATGGAGGAGGAG 61.137 68.421 0.00 0.00 0.00 3.69
1120 1628 3.175240 CGACGCCGTGAGCTTCTG 61.175 66.667 0.00 0.00 37.60 3.02
1134 1642 4.994471 TCTGCTGCCACACCTGCG 62.994 66.667 0.00 0.00 33.01 5.18
1190 1698 2.352805 CACTTCACCCTCTGCCCC 59.647 66.667 0.00 0.00 0.00 5.80
1324 1871 3.157523 GTGCGTCTCGTCGTCGTG 61.158 66.667 1.33 0.00 38.33 4.35
1384 1931 4.681978 GCGCACAGGACCCTCGTT 62.682 66.667 0.30 0.00 0.00 3.85
1659 2215 1.145803 CGAGTCGTTTCCTTTGACCC 58.854 55.000 3.82 0.00 33.09 4.46
1769 2439 4.202461 GCTGGTACATGGGATGAATTCCTA 60.202 45.833 2.27 0.00 40.93 2.94
1844 2514 1.964223 CCGCATGTCTCTACCTACCAT 59.036 52.381 0.00 0.00 0.00 3.55
1851 2521 1.694150 TCTCTACCTACCATGCCATGC 59.306 52.381 0.00 0.00 0.00 4.06
1857 2527 1.217585 CTACCATGCCATGCTCGACG 61.218 60.000 0.00 0.00 0.00 5.12
1880 2550 3.423154 CTCCAAGTCCAACGCGGC 61.423 66.667 12.47 0.00 33.14 6.53
2153 2823 3.008517 TCCTGCCCAATCTGCCGA 61.009 61.111 0.00 0.00 0.00 5.54
2154 2824 2.515523 CCTGCCCAATCTGCCGAG 60.516 66.667 0.00 0.00 0.00 4.63
2205 2884 3.971780 GACATCGCGTCGTCGTCGT 62.972 63.158 5.77 7.18 39.49 4.34
2206 2885 3.295462 CATCGCGTCGTCGTCGTC 61.295 66.667 5.77 5.26 39.49 4.20
2207 2886 4.840554 ATCGCGTCGTCGTCGTCG 62.841 66.667 15.68 15.68 46.99 5.12
2211 2890 4.400776 CGTCGTCGTCGTCGTCGT 62.401 66.667 18.87 0.00 45.27 4.34
2212 2891 2.566765 GTCGTCGTCGTCGTCGTC 60.567 66.667 18.44 11.28 45.27 4.20
2213 2892 3.029735 TCGTCGTCGTCGTCGTCA 61.030 61.111 18.44 1.12 45.27 4.35
2214 2893 2.095282 CGTCGTCGTCGTCGTCAT 59.905 61.111 12.51 0.00 41.73 3.06
2215 2894 1.922220 CGTCGTCGTCGTCGTCATC 60.922 63.158 12.51 1.74 41.73 2.92
2216 2895 1.922220 GTCGTCGTCGTCGTCATCG 60.922 63.158 11.41 4.14 38.33 3.84
2217 2896 2.095282 CGTCGTCGTCGTCATCGT 59.905 61.111 3.67 0.00 38.33 3.73
2218 2897 1.922220 CGTCGTCGTCGTCATCGTC 60.922 63.158 3.67 0.00 38.33 4.20
2219 2898 1.922220 GTCGTCGTCGTCATCGTCG 60.922 63.158 1.33 1.62 46.06 5.12
2220 2899 3.295462 CGTCGTCGTCATCGTCGC 61.295 66.667 0.00 0.00 44.86 5.19
2223 2902 3.598562 CGTCGTCATCGTCGCAGC 61.599 66.667 0.00 0.00 40.72 5.25
2364 3043 1.291184 CGATCGCCAGACAAACAGCA 61.291 55.000 0.26 0.00 0.00 4.41
2392 3071 2.257286 GATGTGCGTGTGTGATGGCC 62.257 60.000 0.00 0.00 0.00 5.36
2398 3081 2.438254 TGTGTGATGGCCGGCATC 60.438 61.111 30.85 26.45 0.00 3.91
2623 3337 4.913924 CGAAAGATTTGAAGGAGTTGCTTG 59.086 41.667 0.00 0.00 0.00 4.01
2631 3345 3.181455 TGAAGGAGTTGCTTGCTTACAGA 60.181 43.478 0.00 0.00 0.00 3.41
2644 3358 6.463995 TTGCTTACAGATGGTTGTTTTTCT 57.536 33.333 0.00 0.00 32.56 2.52
2658 3372 7.064016 TGGTTGTTTTTCTAATTCAGCAACAAC 59.936 33.333 13.93 13.93 42.06 3.32
2708 3425 9.745018 ATGTGATATATAATTGGAGGGTCAAAG 57.255 33.333 0.00 0.00 0.00 2.77
2836 3553 2.622436 CTTCTTGAAACCTAGGAGCCG 58.378 52.381 17.98 0.00 0.00 5.52
2843 3560 4.476297 TGAAACCTAGGAGCCGATATACA 58.524 43.478 17.98 0.00 0.00 2.29
2858 3575 7.936847 AGCCGATATACAAGATAAACCAATCAA 59.063 33.333 0.00 0.00 0.00 2.57
2868 3585 8.462016 CAAGATAAACCAATCAAGAAAGGGTAG 58.538 37.037 0.00 0.00 0.00 3.18
2874 3591 5.011023 ACCAATCAAGAAAGGGTAGCAAAAG 59.989 40.000 0.00 0.00 0.00 2.27
2880 3597 0.961753 AAGGGTAGCAAAAGCAGCAC 59.038 50.000 0.00 0.00 0.00 4.40
2893 3610 0.247419 GCAGCACACATTGATCGACG 60.247 55.000 0.00 0.00 0.00 5.12
2897 3614 0.640262 CACACATTGATCGACGACCG 59.360 55.000 0.00 0.00 40.25 4.79
2907 3624 1.081376 CGACGACCGCTCAGAAAGT 60.081 57.895 0.00 0.00 0.00 2.66
2909 3626 0.318784 GACGACCGCTCAGAAAGTGT 60.319 55.000 0.00 0.00 33.38 3.55
2910 3627 0.956633 ACGACCGCTCAGAAAGTGTA 59.043 50.000 0.00 0.00 33.38 2.90
2911 3628 1.544691 ACGACCGCTCAGAAAGTGTAT 59.455 47.619 0.00 0.00 33.38 2.29
2940 3673 3.973425 AGGCTGCAACTTCCATCTAATT 58.027 40.909 0.50 0.00 0.00 1.40
2941 3674 5.116084 AGGCTGCAACTTCCATCTAATTA 57.884 39.130 0.50 0.00 0.00 1.40
2942 3675 5.699143 AGGCTGCAACTTCCATCTAATTAT 58.301 37.500 0.50 0.00 0.00 1.28
2943 3676 6.841601 AGGCTGCAACTTCCATCTAATTATA 58.158 36.000 0.50 0.00 0.00 0.98
2944 3677 6.939163 AGGCTGCAACTTCCATCTAATTATAG 59.061 38.462 0.50 0.00 0.00 1.31
2945 3678 6.150140 GGCTGCAACTTCCATCTAATTATAGG 59.850 42.308 0.50 0.00 0.00 2.57
2946 3679 6.712547 GCTGCAACTTCCATCTAATTATAGGT 59.287 38.462 0.00 0.00 0.00 3.08
2947 3680 7.095017 GCTGCAACTTCCATCTAATTATAGGTC 60.095 40.741 0.00 0.00 0.00 3.85
2948 3681 8.034313 TGCAACTTCCATCTAATTATAGGTCT 57.966 34.615 0.00 0.00 0.00 3.85
2949 3682 8.494433 TGCAACTTCCATCTAATTATAGGTCTT 58.506 33.333 0.00 0.00 0.00 3.01
2950 3683 9.998106 GCAACTTCCATCTAATTATAGGTCTTA 57.002 33.333 0.00 0.00 0.00 2.10
2972 3705 5.786401 AATACGCATCAGAAGTTCAGAAC 57.214 39.130 5.00 5.00 0.00 3.01
2988 3721 6.203723 AGTTCAGAACAGCAACAATAGAGAAC 59.796 38.462 15.85 0.00 0.00 3.01
2989 3722 5.858381 TCAGAACAGCAACAATAGAGAACT 58.142 37.500 0.00 0.00 0.00 3.01
2991 3724 5.698089 CAGAACAGCAACAATAGAGAACTGA 59.302 40.000 0.00 0.00 0.00 3.41
3005 3738 5.976458 AGAGAACTGAAAATGTTTGCCAAA 58.024 33.333 0.00 0.00 0.00 3.28
3023 3756 2.992847 AAAAAGTACCCCCTCCCTTG 57.007 50.000 0.00 0.00 0.00 3.61
3024 3757 1.842699 AAAAGTACCCCCTCCCTTGT 58.157 50.000 0.00 0.00 0.00 3.16
3025 3758 2.747083 AAAGTACCCCCTCCCTTGTA 57.253 50.000 0.00 0.00 0.00 2.41
3026 3759 2.984989 AAGTACCCCCTCCCTTGTAT 57.015 50.000 0.00 0.00 0.00 2.29
3027 3760 4.372953 AAAGTACCCCCTCCCTTGTATA 57.627 45.455 0.00 0.00 0.00 1.47
3028 3761 4.372953 AAGTACCCCCTCCCTTGTATAA 57.627 45.455 0.00 0.00 0.00 0.98
3029 3762 4.588387 AGTACCCCCTCCCTTGTATAAT 57.412 45.455 0.00 0.00 0.00 1.28
3030 3763 5.708589 AGTACCCCCTCCCTTGTATAATA 57.291 43.478 0.00 0.00 0.00 0.98
3031 3764 6.256360 AGTACCCCCTCCCTTGTATAATAT 57.744 41.667 0.00 0.00 0.00 1.28
3032 3765 7.380415 AGTACCCCCTCCCTTGTATAATATA 57.620 40.000 0.00 0.00 0.00 0.86
3033 3766 7.793153 AGTACCCCCTCCCTTGTATAATATAA 58.207 38.462 0.00 0.00 0.00 0.98
3034 3767 7.905106 AGTACCCCCTCCCTTGTATAATATAAG 59.095 40.741 0.00 0.00 0.00 1.73
3035 3768 6.893396 ACCCCCTCCCTTGTATAATATAAGA 58.107 40.000 0.00 0.00 0.00 2.10
3036 3769 6.966461 ACCCCCTCCCTTGTATAATATAAGAG 59.034 42.308 0.00 0.00 0.00 2.85
3037 3770 6.126739 CCCCCTCCCTTGTATAATATAAGAGC 60.127 46.154 0.00 0.00 0.00 4.09
3038 3771 6.443849 CCCCTCCCTTGTATAATATAAGAGCA 59.556 42.308 0.00 0.00 0.00 4.26
3039 3772 7.127955 CCCCTCCCTTGTATAATATAAGAGCAT 59.872 40.741 0.00 0.00 0.00 3.79
3040 3773 8.552296 CCCTCCCTTGTATAATATAAGAGCATT 58.448 37.037 0.00 0.00 0.00 3.56
3041 3774 9.965902 CCTCCCTTGTATAATATAAGAGCATTT 57.034 33.333 0.00 0.00 0.00 2.32
3068 3801 8.770850 TTACACTAATGTGAAGTTAAAAACGC 57.229 30.769 3.03 0.00 46.55 4.84
3069 3802 7.023197 ACACTAATGTGAAGTTAAAAACGCT 57.977 32.000 3.03 0.00 46.55 5.07
3070 3803 7.477494 ACACTAATGTGAAGTTAAAAACGCTT 58.523 30.769 3.03 0.00 46.55 4.68
3071 3804 7.971722 ACACTAATGTGAAGTTAAAAACGCTTT 59.028 29.630 3.03 0.00 46.55 3.51
3072 3805 8.803799 CACTAATGTGAAGTTAAAAACGCTTTT 58.196 29.630 1.70 1.70 46.55 2.27
3090 3823 8.025243 ACGCTTTTATATTATGTTATGGGACG 57.975 34.615 0.00 0.00 0.00 4.79
3091 3824 7.118680 ACGCTTTTATATTATGTTATGGGACGG 59.881 37.037 0.00 0.00 0.00 4.79
3092 3825 7.332430 CGCTTTTATATTATGTTATGGGACGGA 59.668 37.037 0.00 0.00 0.00 4.69
3093 3826 8.665685 GCTTTTATATTATGTTATGGGACGGAG 58.334 37.037 0.00 0.00 0.00 4.63
3094 3827 9.162764 CTTTTATATTATGTTATGGGACGGAGG 57.837 37.037 0.00 0.00 0.00 4.30
3095 3828 5.693769 ATATTATGTTATGGGACGGAGGG 57.306 43.478 0.00 0.00 0.00 4.30
3096 3829 2.779429 TATGTTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
3097 3830 1.887797 ATGTTATGGGACGGAGGGAA 58.112 50.000 0.00 0.00 0.00 3.97
3098 3831 1.887797 TGTTATGGGACGGAGGGAAT 58.112 50.000 0.00 0.00 0.00 3.01
3099 3832 3.049108 TGTTATGGGACGGAGGGAATA 57.951 47.619 0.00 0.00 0.00 1.75
3100 3833 2.969950 TGTTATGGGACGGAGGGAATAG 59.030 50.000 0.00 0.00 0.00 1.73
3101 3834 3.236896 GTTATGGGACGGAGGGAATAGA 58.763 50.000 0.00 0.00 0.00 1.98
3102 3835 1.718280 ATGGGACGGAGGGAATAGAC 58.282 55.000 0.00 0.00 0.00 2.59
3103 3836 0.337082 TGGGACGGAGGGAATAGACA 59.663 55.000 0.00 0.00 0.00 3.41
3104 3837 1.041437 GGGACGGAGGGAATAGACAG 58.959 60.000 0.00 0.00 0.00 3.51
3105 3838 1.041437 GGACGGAGGGAATAGACAGG 58.959 60.000 0.00 0.00 0.00 4.00
3106 3839 1.411216 GGACGGAGGGAATAGACAGGA 60.411 57.143 0.00 0.00 0.00 3.86
3107 3840 1.682323 GACGGAGGGAATAGACAGGAC 59.318 57.143 0.00 0.00 0.00 3.85
3108 3841 0.669077 CGGAGGGAATAGACAGGACG 59.331 60.000 0.00 0.00 0.00 4.79
3109 3842 1.749635 CGGAGGGAATAGACAGGACGA 60.750 57.143 0.00 0.00 0.00 4.20
3110 3843 1.957877 GGAGGGAATAGACAGGACGAG 59.042 57.143 0.00 0.00 0.00 4.18
3111 3844 1.957877 GAGGGAATAGACAGGACGAGG 59.042 57.143 0.00 0.00 0.00 4.63
3112 3845 1.569548 AGGGAATAGACAGGACGAGGA 59.430 52.381 0.00 0.00 0.00 3.71
3113 3846 2.178106 AGGGAATAGACAGGACGAGGAT 59.822 50.000 0.00 0.00 0.00 3.24
3114 3847 2.559231 GGGAATAGACAGGACGAGGATC 59.441 54.545 0.00 0.00 0.00 3.36
3135 3868 3.166657 CGCAAGAAAGCAAATGAGTAGC 58.833 45.455 0.00 0.00 43.02 3.58
3136 3869 3.120060 CGCAAGAAAGCAAATGAGTAGCT 60.120 43.478 0.00 0.00 39.45 3.32
3137 3870 4.093408 CGCAAGAAAGCAAATGAGTAGCTA 59.907 41.667 0.00 0.00 37.23 3.32
3138 3871 5.390885 CGCAAGAAAGCAAATGAGTAGCTAA 60.391 40.000 0.00 0.00 37.23 3.09
3139 3872 6.558909 GCAAGAAAGCAAATGAGTAGCTAAT 58.441 36.000 0.00 0.00 37.70 1.73
3140 3873 6.690528 GCAAGAAAGCAAATGAGTAGCTAATC 59.309 38.462 14.18 14.18 37.70 1.75
3141 3874 7.414984 GCAAGAAAGCAAATGAGTAGCTAATCT 60.415 37.037 20.82 3.08 37.70 2.40
3142 3875 8.457261 CAAGAAAGCAAATGAGTAGCTAATCTT 58.543 33.333 20.82 12.65 41.40 2.40
3143 3876 8.207521 AGAAAGCAAATGAGTAGCTAATCTTC 57.792 34.615 20.82 13.88 37.70 2.87
3144 3877 7.826252 AGAAAGCAAATGAGTAGCTAATCTTCA 59.174 33.333 20.82 10.91 37.70 3.02
3145 3878 7.928307 AAGCAAATGAGTAGCTAATCTTCAA 57.072 32.000 20.82 2.23 37.70 2.69
3146 3879 7.313951 AGCAAATGAGTAGCTAATCTTCAAC 57.686 36.000 20.82 8.86 36.73 3.18
3147 3880 6.036517 AGCAAATGAGTAGCTAATCTTCAACG 59.963 38.462 20.82 7.04 36.73 4.10
3148 3881 6.036083 GCAAATGAGTAGCTAATCTTCAACGA 59.964 38.462 20.82 0.42 0.00 3.85
3149 3882 7.616673 CAAATGAGTAGCTAATCTTCAACGAG 58.383 38.462 20.82 1.36 0.00 4.18
3150 3883 5.899120 TGAGTAGCTAATCTTCAACGAGT 57.101 39.130 20.82 0.00 0.00 4.18
3151 3884 5.641709 TGAGTAGCTAATCTTCAACGAGTG 58.358 41.667 20.82 0.00 0.00 3.51
3152 3885 5.000012 AGTAGCTAATCTTCAACGAGTGG 58.000 43.478 0.00 0.00 0.00 4.00
3153 3886 3.252974 AGCTAATCTTCAACGAGTGGG 57.747 47.619 0.00 0.00 0.00 4.61
3154 3887 1.666189 GCTAATCTTCAACGAGTGGGC 59.334 52.381 0.00 0.00 0.00 5.36
3155 3888 2.935238 GCTAATCTTCAACGAGTGGGCA 60.935 50.000 0.00 0.00 0.00 5.36
3156 3889 1.523758 AATCTTCAACGAGTGGGCAC 58.476 50.000 0.00 0.00 0.00 5.01
3157 3890 0.670546 ATCTTCAACGAGTGGGCACG 60.671 55.000 0.00 0.00 36.20 5.34
3158 3891 1.594293 CTTCAACGAGTGGGCACGT 60.594 57.895 0.00 0.00 43.29 4.49
3159 3892 1.557443 CTTCAACGAGTGGGCACGTC 61.557 60.000 0.00 0.00 40.78 4.34
3160 3893 2.981977 TTCAACGAGTGGGCACGTCC 62.982 60.000 0.00 0.00 40.78 4.79
3161 3894 3.231736 AACGAGTGGGCACGTCCT 61.232 61.111 0.00 0.00 40.78 3.85
3162 3895 1.904865 AACGAGTGGGCACGTCCTA 60.905 57.895 0.00 0.00 40.78 2.94
3163 3896 1.466025 AACGAGTGGGCACGTCCTAA 61.466 55.000 0.00 0.00 40.78 2.69
3164 3897 1.445582 CGAGTGGGCACGTCCTAAC 60.446 63.158 0.00 0.00 36.20 2.34
3165 3898 1.079336 GAGTGGGCACGTCCTAACC 60.079 63.158 0.00 0.00 36.20 2.85
3166 3899 2.046604 GTGGGCACGTCCTAACCC 60.047 66.667 0.00 0.00 43.14 4.11
3168 3901 2.267961 GGGCACGTCCTAACCCAG 59.732 66.667 0.00 0.00 42.33 4.45
3170 3903 2.267961 GCACGTCCTAACCCAGGG 59.732 66.667 2.85 2.85 45.58 4.45
3171 3904 2.987125 CACGTCCTAACCCAGGGG 59.013 66.667 11.37 6.87 45.58 4.79
3172 3905 3.007323 ACGTCCTAACCCAGGGGC 61.007 66.667 11.37 0.00 45.58 5.80
3173 3906 3.006728 CGTCCTAACCCAGGGGCA 61.007 66.667 11.37 0.00 45.58 5.36
3174 3907 2.375345 CGTCCTAACCCAGGGGCAT 61.375 63.158 11.37 0.00 45.58 4.40
3175 3908 1.532238 GTCCTAACCCAGGGGCATC 59.468 63.158 11.37 0.00 45.58 3.91
3176 3909 0.988678 GTCCTAACCCAGGGGCATCT 60.989 60.000 11.37 0.00 45.58 2.90
3177 3910 0.988145 TCCTAACCCAGGGGCATCTG 60.988 60.000 11.37 0.81 45.58 2.90
3178 3911 1.152881 CTAACCCAGGGGCATCTGC 60.153 63.158 11.37 0.00 39.32 4.26
3179 3912 1.925285 CTAACCCAGGGGCATCTGCA 61.925 60.000 11.37 0.00 44.36 4.41
3180 3913 2.210144 TAACCCAGGGGCATCTGCAC 62.210 60.000 11.37 0.00 45.53 4.57
3186 3919 2.036256 GGGCATCTGCACCCACTT 59.964 61.111 5.25 0.00 46.22 3.16
3187 3920 1.607467 GGGCATCTGCACCCACTTT 60.607 57.895 5.25 0.00 46.22 2.66
3188 3921 1.187567 GGGCATCTGCACCCACTTTT 61.188 55.000 5.25 0.00 46.22 2.27
3189 3922 0.244721 GGCATCTGCACCCACTTTTC 59.755 55.000 4.33 0.00 44.36 2.29
3190 3923 0.961019 GCATCTGCACCCACTTTTCA 59.039 50.000 0.00 0.00 41.59 2.69
3191 3924 1.340889 GCATCTGCACCCACTTTTCAA 59.659 47.619 0.00 0.00 41.59 2.69
3192 3925 2.224018 GCATCTGCACCCACTTTTCAAA 60.224 45.455 0.00 0.00 41.59 2.69
3193 3926 3.740764 GCATCTGCACCCACTTTTCAAAA 60.741 43.478 0.00 0.00 41.59 2.44
3194 3927 4.440880 CATCTGCACCCACTTTTCAAAAA 58.559 39.130 0.00 0.00 0.00 1.94
3253 3986 9.504708 AAATCAAAAGAAAATTCCATGCATACA 57.495 25.926 0.00 0.00 0.00 2.29
3254 3987 9.675464 AATCAAAAGAAAATTCCATGCATACAT 57.325 25.926 0.00 0.00 36.79 2.29
3271 4004 3.135414 ACATGTCGCAAATGTATGTGC 57.865 42.857 0.00 0.00 36.50 4.57
3275 4008 3.981303 GCAAATGTATGTGCGCGG 58.019 55.556 8.83 0.00 0.00 6.46
3276 4009 2.223549 GCAAATGTATGTGCGCGGC 61.224 57.895 8.83 0.00 0.00 6.53
3277 4010 1.136356 CAAATGTATGTGCGCGGCA 59.864 52.632 8.83 4.67 35.60 5.69
3286 4019 2.492090 TGCGCGGCACAAAGTTTT 59.508 50.000 8.83 0.00 31.71 2.43
3287 4020 1.875813 TGCGCGGCACAAAGTTTTG 60.876 52.632 8.83 3.17 43.62 2.44
3304 4037 9.676195 CAAAGTTTTGTGAAAAATTGTCCTTTT 57.324 25.926 0.00 0.00 33.59 2.27
3305 4038 9.676195 AAAGTTTTGTGAAAAATTGTCCTTTTG 57.324 25.926 0.00 0.00 31.13 2.44
3306 4039 8.389779 AGTTTTGTGAAAAATTGTCCTTTTGT 57.610 26.923 0.00 0.00 31.13 2.83
3307 4040 8.845227 AGTTTTGTGAAAAATTGTCCTTTTGTT 58.155 25.926 0.00 0.00 31.13 2.83
3308 4041 9.457110 GTTTTGTGAAAAATTGTCCTTTTGTTT 57.543 25.926 0.00 0.00 31.13 2.83
3310 4043 9.455847 TTTGTGAAAAATTGTCCTTTTGTTTTG 57.544 25.926 0.00 0.00 0.00 2.44
3311 4044 8.159344 TGTGAAAAATTGTCCTTTTGTTTTGT 57.841 26.923 0.00 0.00 0.00 2.83
3312 4045 8.286097 TGTGAAAAATTGTCCTTTTGTTTTGTC 58.714 29.630 0.00 0.00 0.00 3.18
3313 4046 8.503196 GTGAAAAATTGTCCTTTTGTTTTGTCT 58.497 29.630 0.00 0.00 0.00 3.41
3314 4047 8.716909 TGAAAAATTGTCCTTTTGTTTTGTCTC 58.283 29.630 0.00 0.00 0.00 3.36
3315 4048 7.609760 AAAATTGTCCTTTTGTTTTGTCTCC 57.390 32.000 0.00 0.00 0.00 3.71
3316 4049 4.364415 TTGTCCTTTTGTTTTGTCTCCG 57.636 40.909 0.00 0.00 0.00 4.63
3317 4050 3.349022 TGTCCTTTTGTTTTGTCTCCGT 58.651 40.909 0.00 0.00 0.00 4.69
3318 4051 4.515361 TGTCCTTTTGTTTTGTCTCCGTA 58.485 39.130 0.00 0.00 0.00 4.02
3319 4052 4.942483 TGTCCTTTTGTTTTGTCTCCGTAA 59.058 37.500 0.00 0.00 0.00 3.18
3320 4053 5.415077 TGTCCTTTTGTTTTGTCTCCGTAAA 59.585 36.000 0.00 0.00 0.00 2.01
3321 4054 6.072064 TGTCCTTTTGTTTTGTCTCCGTAAAA 60.072 34.615 0.00 0.00 0.00 1.52
3322 4055 6.807720 GTCCTTTTGTTTTGTCTCCGTAAAAA 59.192 34.615 0.00 0.00 0.00 1.94
3349 4082 9.631452 AGAAAAATTTCAGTGCTTCTAAATAGC 57.369 29.630 8.47 0.00 39.61 2.97
3350 4083 9.410556 GAAAAATTTCAGTGCTTCTAAATAGCA 57.589 29.630 1.11 0.00 40.20 3.49
3361 4094 8.370493 TGCTTCTAAATAGCATTCTATGACAC 57.630 34.615 0.00 0.00 43.30 3.67
3362 4095 7.986889 TGCTTCTAAATAGCATTCTATGACACA 59.013 33.333 0.00 0.00 43.30 3.72
3363 4096 8.830580 GCTTCTAAATAGCATTCTATGACACAA 58.169 33.333 0.00 0.00 38.51 3.33
3392 4125 3.514777 TTTTTGCACACGCCACAAA 57.485 42.105 0.00 0.00 37.32 2.83
3393 4126 1.795768 TTTTTGCACACGCCACAAAA 58.204 40.000 0.00 0.00 40.47 2.44
3394 4127 1.795768 TTTTGCACACGCCACAAAAA 58.204 40.000 0.00 0.00 39.57 1.94
3421 4154 7.792925 AGTTATTTTTCCGCAAAACTTTATGC 58.207 30.769 0.00 0.00 37.18 3.14
3422 4155 7.439655 AGTTATTTTTCCGCAAAACTTTATGCA 59.560 29.630 0.00 0.00 42.68 3.96
3423 4156 5.396750 TTTTTCCGCAAAACTTTATGCAC 57.603 34.783 0.00 0.00 42.68 4.57
3424 4157 2.323939 TCCGCAAAACTTTATGCACG 57.676 45.000 0.00 0.00 42.68 5.34
3425 4158 0.707822 CCGCAAAACTTTATGCACGC 59.292 50.000 0.00 0.00 42.68 5.34
3426 4159 1.403493 CGCAAAACTTTATGCACGCA 58.597 45.000 0.00 0.00 42.68 5.24
3427 4160 1.122323 CGCAAAACTTTATGCACGCAC 59.878 47.619 0.00 0.00 42.68 5.34
3428 4161 2.123342 GCAAAACTTTATGCACGCACA 58.877 42.857 0.00 0.00 42.12 4.57
3429 4162 2.730928 GCAAAACTTTATGCACGCACAT 59.269 40.909 0.00 0.00 42.12 3.21
3430 4163 3.917380 GCAAAACTTTATGCACGCACATA 59.083 39.130 0.00 0.00 42.12 2.29
3431 4164 4.030529 GCAAAACTTTATGCACGCACATAG 59.969 41.667 0.00 0.00 42.12 2.23
3432 4165 5.389778 CAAAACTTTATGCACGCACATAGA 58.610 37.500 0.00 0.00 34.15 1.98
3433 4166 5.621197 AAACTTTATGCACGCACATAGAA 57.379 34.783 0.00 0.00 34.15 2.10
3434 4167 4.600012 ACTTTATGCACGCACATAGAAC 57.400 40.909 0.00 0.00 34.15 3.01
3435 4168 4.000325 ACTTTATGCACGCACATAGAACA 59.000 39.130 0.00 0.00 34.15 3.18
3436 4169 4.635765 ACTTTATGCACGCACATAGAACAT 59.364 37.500 0.00 0.00 34.15 2.71
3437 4170 4.534794 TTATGCACGCACATAGAACATG 57.465 40.909 0.00 0.00 34.15 3.21
3438 4171 2.091852 TGCACGCACATAGAACATGA 57.908 45.000 0.00 0.00 0.00 3.07
3439 4172 2.421619 TGCACGCACATAGAACATGAA 58.578 42.857 0.00 0.00 0.00 2.57
3440 4173 2.416202 TGCACGCACATAGAACATGAAG 59.584 45.455 0.00 0.00 0.00 3.02
3441 4174 2.672874 GCACGCACATAGAACATGAAGA 59.327 45.455 0.00 0.00 0.00 2.87
3442 4175 3.484229 GCACGCACATAGAACATGAAGAC 60.484 47.826 0.00 0.00 0.00 3.01
3443 4176 3.679502 CACGCACATAGAACATGAAGACA 59.320 43.478 0.00 0.00 0.00 3.41
3444 4177 4.330894 CACGCACATAGAACATGAAGACAT 59.669 41.667 0.00 0.00 37.19 3.06
3445 4178 5.519927 CACGCACATAGAACATGAAGACATA 59.480 40.000 0.00 0.00 35.09 2.29
3446 4179 5.520288 ACGCACATAGAACATGAAGACATAC 59.480 40.000 0.00 0.00 35.09 2.39
3447 4180 5.519927 CGCACATAGAACATGAAGACATACA 59.480 40.000 0.00 0.00 35.09 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.545965 CAGGAACAAGATGTAGTAAACCTACTG 59.454 40.741 0.00 0.00 45.36 2.74
7 8 7.310485 CCAGGAACAAGATGTAGTAAACCTACT 60.310 40.741 0.00 0.00 45.36 2.57
20 21 2.681848 CAAGCTAGCCAGGAACAAGATG 59.318 50.000 12.13 0.00 0.00 2.90
54 56 2.028748 AGATCAGTGGGTTGCAATTTGC 60.029 45.455 14.49 14.49 45.29 3.68
55 57 3.947910 AGATCAGTGGGTTGCAATTTG 57.052 42.857 0.59 0.00 0.00 2.32
56 58 6.211184 TCAATAAGATCAGTGGGTTGCAATTT 59.789 34.615 0.59 0.00 0.00 1.82
57 59 5.716228 TCAATAAGATCAGTGGGTTGCAATT 59.284 36.000 0.59 0.00 0.00 2.32
58 60 5.263599 TCAATAAGATCAGTGGGTTGCAAT 58.736 37.500 0.59 0.00 0.00 3.56
81 83 3.247648 CGCCGATCAAAGACCGAATTAAT 59.752 43.478 0.00 0.00 0.00 1.40
82 84 2.605818 CGCCGATCAAAGACCGAATTAA 59.394 45.455 0.00 0.00 0.00 1.40
84 86 1.006832 CGCCGATCAAAGACCGAATT 58.993 50.000 0.00 0.00 0.00 2.17
86 88 0.457853 CTCGCCGATCAAAGACCGAA 60.458 55.000 0.00 0.00 0.00 4.30
88 90 1.153823 ACTCGCCGATCAAAGACCG 60.154 57.895 0.00 0.00 0.00 4.79
89 91 0.389948 ACACTCGCCGATCAAAGACC 60.390 55.000 0.00 0.00 0.00 3.85
91 93 3.186909 CAATACACTCGCCGATCAAAGA 58.813 45.455 0.00 0.00 0.00 2.52
92 94 2.930040 ACAATACACTCGCCGATCAAAG 59.070 45.455 0.00 0.00 0.00 2.77
133 137 2.404215 TCGACACTGCTCTTTGTTAGC 58.596 47.619 0.00 0.00 40.50 3.09
134 138 3.426859 CACTCGACACTGCTCTTTGTTAG 59.573 47.826 0.00 0.00 0.00 2.34
135 139 3.181479 ACACTCGACACTGCTCTTTGTTA 60.181 43.478 0.00 0.00 0.00 2.41
136 140 2.205074 CACTCGACACTGCTCTTTGTT 58.795 47.619 0.00 0.00 0.00 2.83
137 141 1.137086 ACACTCGACACTGCTCTTTGT 59.863 47.619 0.00 0.00 0.00 2.83
143 149 1.167155 AGACGACACTCGACACTGCT 61.167 55.000 0.00 0.00 43.74 4.24
180 186 2.360801 TCATCGTCACACTGACTCACAA 59.639 45.455 1.14 0.00 44.85 3.33
181 187 1.953686 TCATCGTCACACTGACTCACA 59.046 47.619 1.14 0.00 44.85 3.58
204 210 3.246936 GGTACTTTCGAAACTTTGACGCT 59.753 43.478 6.47 0.00 0.00 5.07
207 213 7.190871 TCATTTGGTACTTTCGAAACTTTGAC 58.809 34.615 6.47 0.93 0.00 3.18
218 224 5.938125 TGGAGCTACTTCATTTGGTACTTTC 59.062 40.000 0.00 0.00 0.00 2.62
272 318 6.612049 TGGGGAAAGGTAACAACACTATTTTT 59.388 34.615 0.00 0.00 41.41 1.94
273 319 6.137559 TGGGGAAAGGTAACAACACTATTTT 58.862 36.000 0.00 0.00 41.41 1.82
274 320 5.707495 TGGGGAAAGGTAACAACACTATTT 58.293 37.500 0.00 0.00 41.41 1.40
275 321 5.321927 CTGGGGAAAGGTAACAACACTATT 58.678 41.667 0.00 0.00 41.41 1.73
276 322 4.263771 CCTGGGGAAAGGTAACAACACTAT 60.264 45.833 0.00 0.00 41.41 2.12
277 323 3.073356 CCTGGGGAAAGGTAACAACACTA 59.927 47.826 0.00 0.00 41.41 2.74
278 324 2.158519 CCTGGGGAAAGGTAACAACACT 60.159 50.000 0.00 0.00 41.41 3.55
279 325 2.235891 CCTGGGGAAAGGTAACAACAC 58.764 52.381 0.00 0.00 41.41 3.32
280 326 1.479757 GCCTGGGGAAAGGTAACAACA 60.480 52.381 0.00 0.00 39.75 3.33
281 327 1.254026 GCCTGGGGAAAGGTAACAAC 58.746 55.000 0.00 0.00 39.75 3.32
282 328 0.854218 TGCCTGGGGAAAGGTAACAA 59.146 50.000 0.00 0.00 39.75 2.83
283 329 0.404040 CTGCCTGGGGAAAGGTAACA 59.596 55.000 0.00 0.00 39.75 2.41
284 330 0.965866 GCTGCCTGGGGAAAGGTAAC 60.966 60.000 0.00 0.00 39.75 2.50
285 331 1.382629 GCTGCCTGGGGAAAGGTAA 59.617 57.895 0.00 0.00 39.75 2.85
286 332 2.612493 GGCTGCCTGGGGAAAGGTA 61.612 63.158 12.43 0.00 39.75 3.08
287 333 3.984732 GGCTGCCTGGGGAAAGGT 61.985 66.667 12.43 0.00 39.75 3.50
288 334 4.766632 GGGCTGCCTGGGGAAAGG 62.767 72.222 19.68 0.00 40.63 3.11
289 335 3.229659 AAGGGCTGCCTGGGGAAAG 62.230 63.158 19.68 0.00 0.00 2.62
290 336 3.192630 AAGGGCTGCCTGGGGAAA 61.193 61.111 19.68 0.00 0.00 3.13
291 337 3.983420 CAAGGGCTGCCTGGGGAA 61.983 66.667 19.68 0.00 0.00 3.97
312 358 6.208599 CCTTGGTATTGAACTTCTGCCTTTTA 59.791 38.462 0.00 0.00 0.00 1.52
315 361 4.082125 CCTTGGTATTGAACTTCTGCCTT 58.918 43.478 0.00 0.00 0.00 4.35
316 362 3.330701 TCCTTGGTATTGAACTTCTGCCT 59.669 43.478 0.00 0.00 0.00 4.75
350 397 9.408648 ACAACCTAAATTATCCGATGAAAATCT 57.591 29.630 0.00 0.00 0.00 2.40
370 440 9.768435 TTCGTAGATTTTCACGAGGAACAACCT 62.768 40.741 0.00 0.00 46.70 3.50
371 441 4.143179 CGTAGATTTTCACGAGGAACAACC 60.143 45.833 0.00 0.00 40.56 3.77
394 464 8.744568 AGATTTCTTAGATTCTTGGGATGTTC 57.255 34.615 0.00 0.00 0.00 3.18
425 495 9.787435 AATGTCTAGTACCACATCTTGTAAAAA 57.213 29.630 3.79 0.00 31.79 1.94
436 506 3.169908 TGCTGGAATGTCTAGTACCACA 58.830 45.455 0.00 0.00 0.00 4.17
445 523 1.565759 TGGGCTAATGCTGGAATGTCT 59.434 47.619 0.00 0.00 39.59 3.41
446 524 2.057137 TGGGCTAATGCTGGAATGTC 57.943 50.000 0.00 0.00 39.59 3.06
447 525 2.091720 TCATGGGCTAATGCTGGAATGT 60.092 45.455 0.00 0.00 39.59 2.71
574 1023 5.235186 CAGGAAAATAGCGTACATCTTCAGG 59.765 44.000 0.00 0.00 0.00 3.86
604 1053 5.957842 TGGCTTCATATCTTCACGTTTTT 57.042 34.783 0.00 0.00 0.00 1.94
608 1057 4.130118 GGATTGGCTTCATATCTTCACGT 58.870 43.478 0.00 0.00 0.00 4.49
610 1059 6.319658 TCAAAGGATTGGCTTCATATCTTCAC 59.680 38.462 0.00 0.00 37.15 3.18
611 1060 6.425735 TCAAAGGATTGGCTTCATATCTTCA 58.574 36.000 0.00 0.00 37.15 3.02
614 1063 5.301298 GCTTCAAAGGATTGGCTTCATATCT 59.699 40.000 0.00 0.00 37.15 1.98
615 1064 5.508657 GGCTTCAAAGGATTGGCTTCATATC 60.509 44.000 0.00 0.00 37.15 1.63
616 1065 4.343239 GGCTTCAAAGGATTGGCTTCATAT 59.657 41.667 0.00 0.00 37.15 1.78
617 1066 3.701040 GGCTTCAAAGGATTGGCTTCATA 59.299 43.478 0.00 0.00 37.15 2.15
618 1067 2.498885 GGCTTCAAAGGATTGGCTTCAT 59.501 45.455 0.00 0.00 37.15 2.57
619 1068 1.895131 GGCTTCAAAGGATTGGCTTCA 59.105 47.619 0.00 0.00 37.15 3.02
620 1069 1.895131 TGGCTTCAAAGGATTGGCTTC 59.105 47.619 0.00 0.00 37.15 3.86
621 1070 2.014010 TGGCTTCAAAGGATTGGCTT 57.986 45.000 0.00 0.00 37.15 4.35
622 1071 1.829222 CATGGCTTCAAAGGATTGGCT 59.171 47.619 0.00 0.00 37.15 4.75
624 1073 3.512724 AGAACATGGCTTCAAAGGATTGG 59.487 43.478 0.00 0.00 37.15 3.16
625 1074 4.021719 ACAGAACATGGCTTCAAAGGATTG 60.022 41.667 0.00 0.00 37.92 2.67
626 1075 4.154942 ACAGAACATGGCTTCAAAGGATT 58.845 39.130 0.00 0.00 0.00 3.01
627 1076 3.771216 ACAGAACATGGCTTCAAAGGAT 58.229 40.909 0.00 0.00 0.00 3.24
628 1077 3.228188 ACAGAACATGGCTTCAAAGGA 57.772 42.857 0.00 0.00 0.00 3.36
629 1078 4.326504 AAACAGAACATGGCTTCAAAGG 57.673 40.909 0.00 0.00 0.00 3.11
631 1080 5.596836 AGAAAACAGAACATGGCTTCAAA 57.403 34.783 0.00 0.00 0.00 2.69
632 1081 6.899393 ATAGAAAACAGAACATGGCTTCAA 57.101 33.333 0.00 0.00 0.00 2.69
633 1082 6.071952 GGAATAGAAAACAGAACATGGCTTCA 60.072 38.462 0.00 0.00 0.00 3.02
634 1083 6.151817 AGGAATAGAAAACAGAACATGGCTTC 59.848 38.462 0.00 0.00 0.00 3.86
635 1084 6.012745 AGGAATAGAAAACAGAACATGGCTT 58.987 36.000 0.00 0.00 0.00 4.35
636 1085 5.574188 AGGAATAGAAAACAGAACATGGCT 58.426 37.500 0.00 0.00 0.00 4.75
638 1087 6.594159 ACGTAGGAATAGAAAACAGAACATGG 59.406 38.462 0.00 0.00 0.00 3.66
639 1088 7.596749 ACGTAGGAATAGAAAACAGAACATG 57.403 36.000 0.00 0.00 0.00 3.21
640 1089 7.063074 CGAACGTAGGAATAGAAAACAGAACAT 59.937 37.037 0.00 0.00 0.00 2.71
642 1091 6.583806 TCGAACGTAGGAATAGAAAACAGAAC 59.416 38.462 0.00 0.00 0.00 3.01
645 1094 6.939551 TTCGAACGTAGGAATAGAAAACAG 57.060 37.500 0.00 0.00 0.00 3.16
646 1095 7.712264 TTTTCGAACGTAGGAATAGAAAACA 57.288 32.000 0.00 0.00 33.12 2.83
647 1096 6.729295 CGTTTTCGAACGTAGGAATAGAAAAC 59.271 38.462 18.09 18.09 45.68 2.43
666 1115 4.990004 GAAATTTTTCCTGCGACGTTTTC 58.010 39.130 0.00 0.00 0.00 2.29
707 1203 1.234821 TTTCGCGCAGGAGTTTCAAT 58.765 45.000 8.75 0.00 0.00 2.57
723 1219 5.647225 AGATCTGCCAGAACAAAGAGATTTC 59.353 40.000 0.00 0.00 0.00 2.17
757 1265 3.071206 GGCCACCGAGAGCTCAGA 61.071 66.667 17.77 0.00 0.00 3.27
779 1287 1.807573 GTCGCTTTCTCGGCTCAGG 60.808 63.158 0.00 0.00 0.00 3.86
794 1302 2.316867 TGGCTGTTCACGCATGTCG 61.317 57.895 7.79 7.79 45.38 4.35
818 1326 6.514212 CGCTCTGCTGACTAAGTGACTATATT 60.514 42.308 0.00 0.00 0.00 1.28
819 1327 5.049060 CGCTCTGCTGACTAAGTGACTATAT 60.049 44.000 0.00 0.00 0.00 0.86
863 1371 7.081349 CCGACATCAAAGTTTGCATAGTTTAA 58.919 34.615 10.90 0.00 0.00 1.52
864 1372 6.348950 CCCGACATCAAAGTTTGCATAGTTTA 60.349 38.462 10.90 1.00 0.00 2.01
865 1373 5.460646 CCGACATCAAAGTTTGCATAGTTT 58.539 37.500 10.90 4.34 0.00 2.66
866 1374 4.082787 CCCGACATCAAAGTTTGCATAGTT 60.083 41.667 10.90 0.00 0.00 2.24
873 1381 2.154462 AGAGCCCGACATCAAAGTTTG 58.846 47.619 9.44 9.44 0.00 2.93
905 1413 2.982744 GAGGGCTTTCCACGCTTGC 61.983 63.158 0.00 0.00 38.24 4.01
940 1448 1.068472 TCGAGCGTGTTCTCCTTTCTC 60.068 52.381 0.00 0.00 0.00 2.87
941 1449 0.959553 TCGAGCGTGTTCTCCTTTCT 59.040 50.000 0.00 0.00 0.00 2.52
949 1457 3.482783 GCTGGCTCGAGCGTGTTC 61.483 66.667 29.81 16.67 43.26 3.18
980 1488 1.778027 GCTCGGCTCGGTCTAGTCTC 61.778 65.000 0.00 0.00 0.00 3.36
981 1489 1.820481 GCTCGGCTCGGTCTAGTCT 60.820 63.158 0.00 0.00 0.00 3.24
982 1490 2.054140 CTGCTCGGCTCGGTCTAGTC 62.054 65.000 0.00 0.00 0.00 2.59
983 1491 2.045242 TGCTCGGCTCGGTCTAGT 60.045 61.111 0.00 0.00 0.00 2.57
984 1492 1.781025 CTCTGCTCGGCTCGGTCTAG 61.781 65.000 0.00 0.00 0.00 2.43
985 1493 1.820056 CTCTGCTCGGCTCGGTCTA 60.820 63.158 0.00 0.00 0.00 2.59
1040 1548 2.450320 CCCTGGCTCCTCCTCCATG 61.450 68.421 0.00 0.00 35.26 3.66
1274 1812 1.663739 CGTGGAAGAGGTGAACGGA 59.336 57.895 0.00 0.00 0.00 4.69
1324 1871 1.737008 GCCGTCGTGAAGGAAGACC 60.737 63.158 6.00 0.00 29.82 3.85
1449 1996 3.155167 GGGGCAGTAGGAGGACGG 61.155 72.222 0.00 0.00 0.00 4.79
1625 2181 1.394227 GACTCGGATAGTAGATCGCCG 59.606 57.143 0.00 0.00 39.07 6.46
1626 2182 1.394227 CGACTCGGATAGTAGATCGCC 59.606 57.143 0.00 0.00 39.07 5.54
1627 2183 2.067766 ACGACTCGGATAGTAGATCGC 58.932 52.381 2.98 0.00 39.07 4.58
1628 2184 4.377226 GGAAACGACTCGGATAGTAGATCG 60.377 50.000 2.98 0.00 39.07 3.69
1629 2185 4.756135 AGGAAACGACTCGGATAGTAGATC 59.244 45.833 2.98 0.00 39.07 2.75
1630 2186 4.716794 AGGAAACGACTCGGATAGTAGAT 58.283 43.478 2.98 0.00 39.07 1.98
1631 2187 4.148128 AGGAAACGACTCGGATAGTAGA 57.852 45.455 2.98 0.00 39.07 2.59
1769 2439 0.246635 CGGAGTCGGAGTGGTTGAAT 59.753 55.000 0.00 0.00 0.00 2.57
1775 2445 0.031314 CATCATCGGAGTCGGAGTGG 59.969 60.000 6.55 0.00 36.95 4.00
1777 2447 1.025812 GTCATCATCGGAGTCGGAGT 58.974 55.000 6.55 0.00 36.95 3.85
1824 2494 1.399714 TGGTAGGTAGAGACATGCGG 58.600 55.000 0.00 0.00 0.00 5.69
1825 2495 3.018598 CATGGTAGGTAGAGACATGCG 57.981 52.381 0.00 0.00 33.45 4.73
1827 2497 2.700371 TGGCATGGTAGGTAGAGACATG 59.300 50.000 0.00 0.00 41.26 3.21
1857 2527 2.281484 TTGGACTTGGAGCGGCAC 60.281 61.111 1.45 0.00 0.00 5.01
2153 2823 3.157217 GATCGTCGGGATGCTGCCT 62.157 63.158 0.00 0.00 34.82 4.75
2154 2824 2.663188 GATCGTCGGGATGCTGCC 60.663 66.667 0.00 0.00 34.82 4.85
2207 2886 3.248171 GGCTGCGACGATGACGAC 61.248 66.667 0.00 0.00 42.66 4.34
2208 2887 4.492160 GGGCTGCGACGATGACGA 62.492 66.667 0.00 0.00 42.66 4.20
2348 3027 2.253758 GCTGCTGTTTGTCTGGCGA 61.254 57.895 0.00 0.00 0.00 5.54
2380 3059 2.751436 ATGCCGGCCATCACACAC 60.751 61.111 26.77 0.00 0.00 3.82
2398 3081 1.801913 GTACGAGTGCAGCAGGACG 60.802 63.158 0.00 4.73 41.52 4.79
2486 3200 4.806342 AAGTTTGTAACTACAGGCAACG 57.194 40.909 0.00 0.00 41.91 4.10
2623 3337 9.129209 GAATTAGAAAAACAACCATCTGTAAGC 57.871 33.333 0.00 0.00 0.00 3.09
2631 3345 7.271511 TGTTGCTGAATTAGAAAAACAACCAT 58.728 30.769 0.00 0.00 36.26 3.55
2644 3358 7.271511 ACAAAATTCTGGTTGTTGCTGAATTA 58.728 30.769 0.00 0.00 36.65 1.40
2681 3395 9.519191 TTTGACCCTCCAATTATATATCACATG 57.481 33.333 0.00 0.00 0.00 3.21
2805 3522 3.815962 GGTTTCAAGAAGGTTCTGGACTC 59.184 47.826 0.00 0.00 36.99 3.36
2843 3560 7.122799 GCTACCCTTTCTTGATTGGTTTATCTT 59.877 37.037 0.00 0.00 0.00 2.40
2874 3591 0.247419 CGTCGATCAATGTGTGCTGC 60.247 55.000 0.00 0.00 0.00 5.25
2880 3597 0.802222 AGCGGTCGTCGATCAATGTG 60.802 55.000 6.28 0.00 42.43 3.21
2893 3610 4.113354 CCTTATACACTTTCTGAGCGGTC 58.887 47.826 7.89 7.89 0.00 4.79
2897 3614 6.508777 CCTAGACCTTATACACTTTCTGAGC 58.491 44.000 0.00 0.00 0.00 4.26
2907 3624 4.030913 AGTTGCAGCCTAGACCTTATACA 58.969 43.478 0.00 0.00 0.00 2.29
2909 3626 4.101119 GGAAGTTGCAGCCTAGACCTTATA 59.899 45.833 0.00 0.00 0.00 0.98
2910 3627 3.118223 GGAAGTTGCAGCCTAGACCTTAT 60.118 47.826 0.00 0.00 0.00 1.73
2911 3628 2.236395 GGAAGTTGCAGCCTAGACCTTA 59.764 50.000 0.00 0.00 0.00 2.69
2940 3673 8.405418 ACTTCTGATGCGTATTAAGACCTATA 57.595 34.615 9.86 0.00 0.00 1.31
2941 3674 7.291411 ACTTCTGATGCGTATTAAGACCTAT 57.709 36.000 9.86 0.00 0.00 2.57
2942 3675 6.710597 ACTTCTGATGCGTATTAAGACCTA 57.289 37.500 9.86 0.00 0.00 3.08
2943 3676 5.599999 ACTTCTGATGCGTATTAAGACCT 57.400 39.130 9.86 0.00 0.00 3.85
2944 3677 5.810587 TGAACTTCTGATGCGTATTAAGACC 59.189 40.000 9.86 0.00 0.00 3.85
2945 3678 6.752351 TCTGAACTTCTGATGCGTATTAAGAC 59.248 38.462 9.86 0.00 0.00 3.01
2946 3679 6.863275 TCTGAACTTCTGATGCGTATTAAGA 58.137 36.000 9.86 4.15 0.00 2.10
2947 3680 7.063426 TGTTCTGAACTTCTGATGCGTATTAAG 59.937 37.037 20.18 0.00 0.00 1.85
2948 3681 6.871492 TGTTCTGAACTTCTGATGCGTATTAA 59.129 34.615 20.18 0.00 0.00 1.40
2949 3682 6.394809 TGTTCTGAACTTCTGATGCGTATTA 58.605 36.000 20.18 0.00 0.00 0.98
2950 3683 5.237815 TGTTCTGAACTTCTGATGCGTATT 58.762 37.500 20.18 0.00 0.00 1.89
2951 3684 4.820897 TGTTCTGAACTTCTGATGCGTAT 58.179 39.130 20.18 0.00 0.00 3.06
2952 3685 4.237724 CTGTTCTGAACTTCTGATGCGTA 58.762 43.478 20.18 0.00 0.00 4.42
2972 3705 7.365741 ACATTTTCAGTTCTCTATTGTTGCTG 58.634 34.615 0.00 0.00 0.00 4.41
3005 3738 1.842699 ACAAGGGAGGGGGTACTTTT 58.157 50.000 0.00 0.00 0.00 2.27
3013 3746 6.443849 TGCTCTTATATTATACAAGGGAGGGG 59.556 42.308 0.00 0.00 0.00 4.79
3014 3747 7.496346 TGCTCTTATATTATACAAGGGAGGG 57.504 40.000 0.00 0.00 0.00 4.30
3015 3748 9.965902 AAATGCTCTTATATTATACAAGGGAGG 57.034 33.333 0.00 0.00 0.00 4.30
3042 3775 9.224058 GCGTTTTTAACTTCACATTAGTGTAAA 57.776 29.630 0.00 0.00 46.01 2.01
3043 3776 8.614346 AGCGTTTTTAACTTCACATTAGTGTAA 58.386 29.630 0.00 0.00 46.01 2.41
3044 3777 8.145316 AGCGTTTTTAACTTCACATTAGTGTA 57.855 30.769 0.00 0.00 46.01 2.90
3045 3778 7.023197 AGCGTTTTTAACTTCACATTAGTGT 57.977 32.000 0.00 0.00 46.01 3.55
3046 3779 8.803799 AAAAGCGTTTTTAACTTCACATTAGTG 58.196 29.630 8.32 0.00 39.60 2.74
3047 3780 8.920509 AAAAGCGTTTTTAACTTCACATTAGT 57.079 26.923 8.32 0.00 34.81 2.24
3064 3797 8.500773 CGTCCCATAACATAATATAAAAGCGTT 58.499 33.333 0.00 0.00 0.00 4.84
3065 3798 7.118680 CCGTCCCATAACATAATATAAAAGCGT 59.881 37.037 0.00 0.00 0.00 5.07
3066 3799 7.332430 TCCGTCCCATAACATAATATAAAAGCG 59.668 37.037 0.00 0.00 0.00 4.68
3067 3800 8.556213 TCCGTCCCATAACATAATATAAAAGC 57.444 34.615 0.00 0.00 0.00 3.51
3068 3801 9.162764 CCTCCGTCCCATAACATAATATAAAAG 57.837 37.037 0.00 0.00 0.00 2.27
3069 3802 8.104566 CCCTCCGTCCCATAACATAATATAAAA 58.895 37.037 0.00 0.00 0.00 1.52
3070 3803 7.458488 TCCCTCCGTCCCATAACATAATATAAA 59.542 37.037 0.00 0.00 0.00 1.40
3071 3804 6.961131 TCCCTCCGTCCCATAACATAATATAA 59.039 38.462 0.00 0.00 0.00 0.98
3072 3805 6.504849 TCCCTCCGTCCCATAACATAATATA 58.495 40.000 0.00 0.00 0.00 0.86
3073 3806 5.347124 TCCCTCCGTCCCATAACATAATAT 58.653 41.667 0.00 0.00 0.00 1.28
3074 3807 4.754311 TCCCTCCGTCCCATAACATAATA 58.246 43.478 0.00 0.00 0.00 0.98
3075 3808 3.593942 TCCCTCCGTCCCATAACATAAT 58.406 45.455 0.00 0.00 0.00 1.28
3076 3809 3.049108 TCCCTCCGTCCCATAACATAA 57.951 47.619 0.00 0.00 0.00 1.90
3077 3810 2.779429 TCCCTCCGTCCCATAACATA 57.221 50.000 0.00 0.00 0.00 2.29
3078 3811 1.887797 TTCCCTCCGTCCCATAACAT 58.112 50.000 0.00 0.00 0.00 2.71
3079 3812 1.887797 ATTCCCTCCGTCCCATAACA 58.112 50.000 0.00 0.00 0.00 2.41
3080 3813 3.006644 GTCTATTCCCTCCGTCCCATAAC 59.993 52.174 0.00 0.00 0.00 1.89
3081 3814 3.236896 GTCTATTCCCTCCGTCCCATAA 58.763 50.000 0.00 0.00 0.00 1.90
3082 3815 2.178325 TGTCTATTCCCTCCGTCCCATA 59.822 50.000 0.00 0.00 0.00 2.74
3083 3816 1.062428 TGTCTATTCCCTCCGTCCCAT 60.062 52.381 0.00 0.00 0.00 4.00
3084 3817 0.337082 TGTCTATTCCCTCCGTCCCA 59.663 55.000 0.00 0.00 0.00 4.37
3085 3818 1.041437 CTGTCTATTCCCTCCGTCCC 58.959 60.000 0.00 0.00 0.00 4.46
3086 3819 1.041437 CCTGTCTATTCCCTCCGTCC 58.959 60.000 0.00 0.00 0.00 4.79
3087 3820 1.682323 GTCCTGTCTATTCCCTCCGTC 59.318 57.143 0.00 0.00 0.00 4.79
3088 3821 1.777941 GTCCTGTCTATTCCCTCCGT 58.222 55.000 0.00 0.00 0.00 4.69
3089 3822 0.669077 CGTCCTGTCTATTCCCTCCG 59.331 60.000 0.00 0.00 0.00 4.63
3090 3823 1.957877 CTCGTCCTGTCTATTCCCTCC 59.042 57.143 0.00 0.00 0.00 4.30
3091 3824 1.957877 CCTCGTCCTGTCTATTCCCTC 59.042 57.143 0.00 0.00 0.00 4.30
3092 3825 1.569548 TCCTCGTCCTGTCTATTCCCT 59.430 52.381 0.00 0.00 0.00 4.20
3093 3826 2.068834 TCCTCGTCCTGTCTATTCCC 57.931 55.000 0.00 0.00 0.00 3.97
3094 3827 2.226912 CGATCCTCGTCCTGTCTATTCC 59.773 54.545 0.00 0.00 34.72 3.01
3095 3828 2.350964 GCGATCCTCGTCCTGTCTATTC 60.351 54.545 0.00 0.00 42.81 1.75
3096 3829 1.609555 GCGATCCTCGTCCTGTCTATT 59.390 52.381 0.00 0.00 42.81 1.73
3097 3830 1.240256 GCGATCCTCGTCCTGTCTAT 58.760 55.000 0.00 0.00 42.81 1.98
3098 3831 0.107361 TGCGATCCTCGTCCTGTCTA 60.107 55.000 0.00 0.00 42.81 2.59
3099 3832 0.965866 TTGCGATCCTCGTCCTGTCT 60.966 55.000 0.00 0.00 42.81 3.41
3100 3833 0.526524 CTTGCGATCCTCGTCCTGTC 60.527 60.000 0.00 0.00 42.81 3.51
3101 3834 0.965866 TCTTGCGATCCTCGTCCTGT 60.966 55.000 0.00 0.00 42.81 4.00
3102 3835 0.173481 TTCTTGCGATCCTCGTCCTG 59.827 55.000 0.00 0.00 42.81 3.86
3103 3836 0.895530 TTTCTTGCGATCCTCGTCCT 59.104 50.000 0.00 0.00 42.81 3.85
3104 3837 1.281899 CTTTCTTGCGATCCTCGTCC 58.718 55.000 0.00 0.00 42.81 4.79
3105 3838 0.647925 GCTTTCTTGCGATCCTCGTC 59.352 55.000 0.00 0.00 42.81 4.20
3106 3839 0.037326 TGCTTTCTTGCGATCCTCGT 60.037 50.000 0.00 0.00 42.81 4.18
3107 3840 1.078709 TTGCTTTCTTGCGATCCTCG 58.921 50.000 0.00 0.00 43.89 4.63
3108 3841 3.127548 TCATTTGCTTTCTTGCGATCCTC 59.872 43.478 0.00 0.00 35.36 3.71
3109 3842 3.084039 TCATTTGCTTTCTTGCGATCCT 58.916 40.909 0.00 0.00 35.36 3.24
3110 3843 3.119708 ACTCATTTGCTTTCTTGCGATCC 60.120 43.478 0.00 0.00 35.36 3.36
3111 3844 4.088823 ACTCATTTGCTTTCTTGCGATC 57.911 40.909 0.00 0.00 35.36 3.69
3112 3845 4.437930 GCTACTCATTTGCTTTCTTGCGAT 60.438 41.667 0.00 0.00 35.36 4.58
3113 3846 3.120199 GCTACTCATTTGCTTTCTTGCGA 60.120 43.478 0.00 0.00 35.36 5.10
3114 3847 3.120060 AGCTACTCATTTGCTTTCTTGCG 60.120 43.478 0.00 0.00 32.61 4.85
3115 3848 4.431661 AGCTACTCATTTGCTTTCTTGC 57.568 40.909 0.00 0.00 32.61 4.01
3116 3849 7.983307 AGATTAGCTACTCATTTGCTTTCTTG 58.017 34.615 13.04 0.00 38.15 3.02
3117 3850 8.572855 AAGATTAGCTACTCATTTGCTTTCTT 57.427 30.769 13.04 0.00 38.15 2.52
3118 3851 7.826252 TGAAGATTAGCTACTCATTTGCTTTCT 59.174 33.333 13.04 0.00 38.15 2.52
3119 3852 7.978982 TGAAGATTAGCTACTCATTTGCTTTC 58.021 34.615 13.04 6.88 38.15 2.62
3120 3853 7.928307 TGAAGATTAGCTACTCATTTGCTTT 57.072 32.000 13.04 0.00 38.15 3.51
3121 3854 7.413438 CGTTGAAGATTAGCTACTCATTTGCTT 60.413 37.037 13.04 0.00 38.15 3.91
3122 3855 6.036517 CGTTGAAGATTAGCTACTCATTTGCT 59.963 38.462 13.04 0.00 40.43 3.91
3123 3856 6.036083 TCGTTGAAGATTAGCTACTCATTTGC 59.964 38.462 13.04 0.83 0.00 3.68
3124 3857 7.276658 ACTCGTTGAAGATTAGCTACTCATTTG 59.723 37.037 13.04 0.00 0.00 2.32
3125 3858 7.276658 CACTCGTTGAAGATTAGCTACTCATTT 59.723 37.037 13.04 0.24 0.00 2.32
3126 3859 6.754209 CACTCGTTGAAGATTAGCTACTCATT 59.246 38.462 13.04 5.05 0.00 2.57
3127 3860 6.269315 CACTCGTTGAAGATTAGCTACTCAT 58.731 40.000 13.04 1.24 0.00 2.90
3128 3861 5.393135 CCACTCGTTGAAGATTAGCTACTCA 60.393 44.000 13.04 2.51 0.00 3.41
3129 3862 5.038033 CCACTCGTTGAAGATTAGCTACTC 58.962 45.833 2.94 2.94 0.00 2.59
3130 3863 4.142138 CCCACTCGTTGAAGATTAGCTACT 60.142 45.833 0.00 0.00 0.00 2.57
3131 3864 4.113354 CCCACTCGTTGAAGATTAGCTAC 58.887 47.826 0.00 0.00 0.00 3.58
3132 3865 3.430374 GCCCACTCGTTGAAGATTAGCTA 60.430 47.826 0.00 0.00 0.00 3.32
3133 3866 2.678190 GCCCACTCGTTGAAGATTAGCT 60.678 50.000 0.00 0.00 0.00 3.32
3134 3867 1.666189 GCCCACTCGTTGAAGATTAGC 59.334 52.381 0.00 0.00 0.00 3.09
3135 3868 2.673368 GTGCCCACTCGTTGAAGATTAG 59.327 50.000 0.00 0.00 0.00 1.73
3136 3869 2.695359 GTGCCCACTCGTTGAAGATTA 58.305 47.619 0.00 0.00 0.00 1.75
3137 3870 1.523758 GTGCCCACTCGTTGAAGATT 58.476 50.000 0.00 0.00 0.00 2.40
3138 3871 0.670546 CGTGCCCACTCGTTGAAGAT 60.671 55.000 0.00 0.00 0.00 2.40
3139 3872 1.300620 CGTGCCCACTCGTTGAAGA 60.301 57.895 0.00 0.00 0.00 2.87
3140 3873 1.557443 GACGTGCCCACTCGTTGAAG 61.557 60.000 0.00 0.00 45.27 3.02
3141 3874 1.593209 GACGTGCCCACTCGTTGAA 60.593 57.895 0.00 0.00 45.27 2.69
3142 3875 2.028484 GACGTGCCCACTCGTTGA 59.972 61.111 0.00 0.00 45.27 3.18
3143 3876 2.149803 TAGGACGTGCCCACTCGTTG 62.150 60.000 2.38 0.00 45.27 4.10
3144 3877 1.466025 TTAGGACGTGCCCACTCGTT 61.466 55.000 2.38 0.00 45.27 3.85
3146 3879 1.445582 GTTAGGACGTGCCCACTCG 60.446 63.158 2.38 0.00 37.37 4.18
3147 3880 1.079336 GGTTAGGACGTGCCCACTC 60.079 63.158 2.38 0.00 37.37 3.51
3148 3881 2.590114 GGGTTAGGACGTGCCCACT 61.590 63.158 2.38 0.00 40.76 4.00
3149 3882 2.046604 GGGTTAGGACGTGCCCAC 60.047 66.667 2.38 0.00 40.76 4.61
3151 3884 2.267961 CTGGGTTAGGACGTGCCC 59.732 66.667 2.38 0.00 41.42 5.36
3159 3892 1.533711 CAGATGCCCCTGGGTTAGG 59.466 63.158 12.71 0.00 46.88 2.69
3160 3893 1.152881 GCAGATGCCCCTGGGTTAG 60.153 63.158 12.71 0.00 37.65 2.34
3161 3894 1.928046 TGCAGATGCCCCTGGGTTA 60.928 57.895 12.71 0.00 41.18 2.85
3162 3895 3.267233 TGCAGATGCCCCTGGGTT 61.267 61.111 12.71 0.00 41.18 4.11
3163 3896 4.052518 GTGCAGATGCCCCTGGGT 62.053 66.667 12.71 0.00 41.18 4.51
3164 3897 4.828296 GGTGCAGATGCCCCTGGG 62.828 72.222 5.50 5.50 41.18 4.45
3165 3898 4.828296 GGGTGCAGATGCCCCTGG 62.828 72.222 18.69 0.00 43.68 4.45
3166 3899 4.051167 TGGGTGCAGATGCCCCTG 62.051 66.667 23.42 0.00 45.75 4.45
3167 3900 4.052518 GTGGGTGCAGATGCCCCT 62.053 66.667 23.42 0.00 45.75 4.79
3168 3901 3.590466 AAGTGGGTGCAGATGCCCC 62.590 63.158 18.99 18.99 45.76 5.80
3169 3902 1.187567 AAAAGTGGGTGCAGATGCCC 61.188 55.000 3.10 3.10 45.04 5.36
3170 3903 0.244721 GAAAAGTGGGTGCAGATGCC 59.755 55.000 1.72 0.00 41.18 4.40
3171 3904 0.961019 TGAAAAGTGGGTGCAGATGC 59.039 50.000 0.00 0.00 42.50 3.91
3172 3905 3.731652 TTTGAAAAGTGGGTGCAGATG 57.268 42.857 0.00 0.00 0.00 2.90
3173 3906 4.751767 TTTTTGAAAAGTGGGTGCAGAT 57.248 36.364 0.00 0.00 0.00 2.90
3227 3960 9.504708 TGTATGCATGGAATTTTCTTTTGATTT 57.495 25.926 10.16 0.00 0.00 2.17
3228 3961 9.675464 ATGTATGCATGGAATTTTCTTTTGATT 57.325 25.926 10.16 0.00 33.37 2.57
3229 3962 9.104965 CATGTATGCATGGAATTTTCTTTTGAT 57.895 29.630 15.36 0.00 46.47 2.57
3230 3963 8.481974 CATGTATGCATGGAATTTTCTTTTGA 57.518 30.769 15.36 0.00 46.47 2.69
3245 3978 5.694231 ATACATTTGCGACATGTATGCAT 57.306 34.783 21.76 3.79 43.33 3.96
3249 3982 4.847633 GCACATACATTTGCGACATGTAT 58.152 39.130 0.00 12.39 45.02 2.29
3250 3983 4.271590 GCACATACATTTGCGACATGTA 57.728 40.909 0.00 9.82 40.56 2.29
3251 3984 3.135414 GCACATACATTTGCGACATGT 57.865 42.857 0.00 0.00 38.45 3.21
3258 3991 2.223549 GCCGCGCACATACATTTGC 61.224 57.895 8.75 0.00 35.26 3.68
3259 3992 1.136356 TGCCGCGCACATACATTTG 59.864 52.632 8.75 0.00 31.71 2.32
3260 3993 3.584618 TGCCGCGCACATACATTT 58.415 50.000 8.75 0.00 31.71 2.32
3269 4002 1.875813 CAAAACTTTGTGCCGCGCA 60.876 52.632 8.75 1.51 35.60 6.09
3270 4003 2.920126 CAAAACTTTGTGCCGCGC 59.080 55.556 0.00 0.00 33.59 6.86
3278 4011 9.676195 AAAAGGACAATTTTTCACAAAACTTTG 57.324 25.926 0.60 0.60 43.62 2.77
3279 4012 9.676195 CAAAAGGACAATTTTTCACAAAACTTT 57.324 25.926 0.00 0.00 34.63 2.66
3280 4013 8.845227 ACAAAAGGACAATTTTTCACAAAACTT 58.155 25.926 0.00 0.00 34.63 2.66
3281 4014 8.389779 ACAAAAGGACAATTTTTCACAAAACT 57.610 26.923 0.00 0.00 34.63 2.66
3282 4015 9.457110 AAACAAAAGGACAATTTTTCACAAAAC 57.543 25.926 0.00 0.00 34.63 2.43
3284 4017 9.455847 CAAAACAAAAGGACAATTTTTCACAAA 57.544 25.926 0.00 0.00 30.01 2.83
3285 4018 8.624776 ACAAAACAAAAGGACAATTTTTCACAA 58.375 25.926 0.00 0.00 30.01 3.33
3286 4019 8.159344 ACAAAACAAAAGGACAATTTTTCACA 57.841 26.923 0.00 0.00 30.01 3.58
3287 4020 8.503196 AGACAAAACAAAAGGACAATTTTTCAC 58.497 29.630 0.00 0.00 30.01 3.18
3288 4021 8.614469 AGACAAAACAAAAGGACAATTTTTCA 57.386 26.923 0.00 0.00 30.01 2.69
3289 4022 8.175069 GGAGACAAAACAAAAGGACAATTTTTC 58.825 33.333 0.00 0.00 30.01 2.29
3290 4023 7.148490 CGGAGACAAAACAAAAGGACAATTTTT 60.148 33.333 0.00 0.00 30.01 1.94
3291 4024 6.312672 CGGAGACAAAACAAAAGGACAATTTT 59.687 34.615 0.00 0.00 32.65 1.82
3292 4025 5.810074 CGGAGACAAAACAAAAGGACAATTT 59.190 36.000 0.00 0.00 0.00 1.82
3293 4026 5.105513 ACGGAGACAAAACAAAAGGACAATT 60.106 36.000 0.00 0.00 0.00 2.32
3294 4027 4.401202 ACGGAGACAAAACAAAAGGACAAT 59.599 37.500 0.00 0.00 0.00 2.71
3295 4028 3.759618 ACGGAGACAAAACAAAAGGACAA 59.240 39.130 0.00 0.00 0.00 3.18
3296 4029 3.349022 ACGGAGACAAAACAAAAGGACA 58.651 40.909 0.00 0.00 0.00 4.02
3297 4030 5.488645 TTACGGAGACAAAACAAAAGGAC 57.511 39.130 0.00 0.00 0.00 3.85
3298 4031 6.512342 TTTTACGGAGACAAAACAAAAGGA 57.488 33.333 0.00 0.00 0.00 3.36
3323 4056 9.631452 GCTATTTAGAAGCACTGAAATTTTTCT 57.369 29.630 5.99 5.99 39.83 2.52
3324 4057 9.410556 TGCTATTTAGAAGCACTGAAATTTTTC 57.589 29.630 0.00 0.00 44.78 2.29
3337 4070 8.370493 TGTGTCATAGAATGCTATTTAGAAGC 57.630 34.615 0.00 0.00 35.13 3.86
3374 4107 1.795768 TTTTGTGGCGTGTGCAAAAA 58.204 40.000 0.00 0.00 45.35 1.94
3375 4108 1.795768 TTTTTGTGGCGTGTGCAAAA 58.204 40.000 0.00 0.00 45.35 2.44
3376 4109 3.514777 TTTTTGTGGCGTGTGCAAA 57.485 42.105 0.00 0.00 45.35 3.68
3395 4128 8.279800 GCATAAAGTTTTGCGGAAAAATAACTT 58.720 29.630 16.76 13.09 39.86 2.66
3396 4129 7.439655 TGCATAAAGTTTTGCGGAAAAATAACT 59.560 29.630 16.76 7.50 41.80 2.24
3397 4130 7.529185 GTGCATAAAGTTTTGCGGAAAAATAAC 59.471 33.333 16.76 5.13 41.80 1.89
3398 4131 7.567771 CGTGCATAAAGTTTTGCGGAAAAATAA 60.568 33.333 16.76 8.06 41.80 1.40
3399 4132 6.129062 CGTGCATAAAGTTTTGCGGAAAAATA 60.129 34.615 16.76 10.50 41.80 1.40
3400 4133 5.332959 CGTGCATAAAGTTTTGCGGAAAAAT 60.333 36.000 16.76 13.04 41.80 1.82
3401 4134 4.026475 CGTGCATAAAGTTTTGCGGAAAAA 60.026 37.500 16.76 1.38 41.80 1.94
3402 4135 3.487574 CGTGCATAAAGTTTTGCGGAAAA 59.512 39.130 11.06 11.06 41.80 2.29
3403 4136 3.046390 CGTGCATAAAGTTTTGCGGAAA 58.954 40.909 0.00 0.00 41.80 3.13
3404 4137 2.656085 CGTGCATAAAGTTTTGCGGAA 58.344 42.857 14.06 0.00 41.80 4.30
3405 4138 1.664588 GCGTGCATAAAGTTTTGCGGA 60.665 47.619 14.06 0.00 41.80 5.54
3406 4139 0.707822 GCGTGCATAAAGTTTTGCGG 59.292 50.000 14.06 10.95 41.80 5.69
3407 4140 1.122323 GTGCGTGCATAAAGTTTTGCG 59.878 47.619 14.06 5.81 41.80 4.85
3408 4141 2.123342 TGTGCGTGCATAAAGTTTTGC 58.877 42.857 12.84 12.84 39.33 3.68
3409 4142 5.389778 TCTATGTGCGTGCATAAAGTTTTG 58.610 37.500 0.00 0.00 31.76 2.44
3410 4143 5.621197 TCTATGTGCGTGCATAAAGTTTT 57.379 34.783 0.00 0.00 31.76 2.43
3411 4144 5.049060 TGTTCTATGTGCGTGCATAAAGTTT 60.049 36.000 0.00 0.00 31.76 2.66
3412 4145 4.454161 TGTTCTATGTGCGTGCATAAAGTT 59.546 37.500 0.00 0.00 31.76 2.66
3413 4146 4.000325 TGTTCTATGTGCGTGCATAAAGT 59.000 39.130 0.00 0.00 31.76 2.66
3414 4147 4.598406 TGTTCTATGTGCGTGCATAAAG 57.402 40.909 0.00 0.00 31.76 1.85
3415 4148 4.633565 TCATGTTCTATGTGCGTGCATAAA 59.366 37.500 0.00 0.00 31.76 1.40
3416 4149 4.187694 TCATGTTCTATGTGCGTGCATAA 58.812 39.130 0.00 0.00 31.76 1.90
3417 4150 3.791245 TCATGTTCTATGTGCGTGCATA 58.209 40.909 0.00 0.00 0.00 3.14
3418 4151 2.631267 TCATGTTCTATGTGCGTGCAT 58.369 42.857 0.00 0.12 0.00 3.96
3419 4152 2.091852 TCATGTTCTATGTGCGTGCA 57.908 45.000 0.00 0.00 0.00 4.57
3420 4153 2.672874 TCTTCATGTTCTATGTGCGTGC 59.327 45.455 0.00 0.00 0.00 5.34
3421 4154 3.679502 TGTCTTCATGTTCTATGTGCGTG 59.320 43.478 0.00 0.00 0.00 5.34
3422 4155 3.925379 TGTCTTCATGTTCTATGTGCGT 58.075 40.909 0.00 0.00 0.00 5.24
3423 4156 5.519927 TGTATGTCTTCATGTTCTATGTGCG 59.480 40.000 0.00 0.00 35.70 5.34
3424 4157 6.908870 TGTATGTCTTCATGTTCTATGTGC 57.091 37.500 0.00 0.00 35.70 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.