Multiple sequence alignment - TraesCS5A01G229600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G229600 chr5A 100.000 3863 0 0 1 3863 445200470 445196608 0.000000e+00 7134.0
1 TraesCS5A01G229600 chr5A 96.269 134 3 2 3291 3423 445197054 445196922 6.500000e-53 219.0
2 TraesCS5A01G229600 chr5A 96.269 134 3 2 3417 3549 445197180 445197048 6.500000e-53 219.0
3 TraesCS5A01G229600 chr5A 85.638 188 26 1 415 601 510497898 510498085 3.040000e-46 196.0
4 TraesCS5A01G229600 chr5B 97.008 2507 66 5 926 3423 405554618 405552112 0.000000e+00 4205.0
5 TraesCS5A01G229600 chr5B 96.231 451 8 4 3417 3863 405552244 405551799 0.000000e+00 730.0
6 TraesCS5A01G229600 chr5B 82.796 186 28 4 418 601 30522813 30522630 3.090000e-36 163.0
7 TraesCS5A01G229600 chr5D 95.342 2662 84 17 777 3417 345977990 345980632 0.000000e+00 4193.0
8 TraesCS5A01G229600 chr5D 94.794 461 8 5 3417 3863 345980506 345980964 0.000000e+00 704.0
9 TraesCS5A01G229600 chr5D 78.697 399 64 13 4 389 345977543 345977933 2.980000e-61 246.0
10 TraesCS5A01G229600 chr5D 81.481 189 34 1 414 601 8630403 8630591 1.860000e-33 154.0
11 TraesCS5A01G229600 chr6D 85.143 175 25 1 420 593 80150819 80150645 1.100000e-40 178.0
12 TraesCS5A01G229600 chr6D 83.069 189 31 1 414 601 20134478 20134666 1.850000e-38 171.0
13 TraesCS5A01G229600 chr3B 83.607 183 29 1 420 601 488134265 488134447 1.850000e-38 171.0
14 TraesCS5A01G229600 chr7B 83.152 184 30 1 418 601 448416591 448416409 2.390000e-37 167.0
15 TraesCS5A01G229600 chr7B 100.000 28 0 0 364 391 705811577 705811604 7.000000e-03 52.8
16 TraesCS5A01G229600 chr7D 82.447 188 32 1 415 601 222775187 222775374 3.090000e-36 163.0
17 TraesCS5A01G229600 chr7D 83.051 177 28 2 418 593 264341453 264341628 3.990000e-35 159.0
18 TraesCS5A01G229600 chr7D 85.714 63 9 0 329 391 203884846 203884908 2.490000e-07 67.6
19 TraesCS5A01G229600 chr4B 73.643 387 72 18 418 781 575685951 575686330 5.240000e-24 122.0
20 TraesCS5A01G229600 chr4B 73.127 387 76 21 418 781 575630703 575631084 3.150000e-21 113.0
21 TraesCS5A01G229600 chr3D 86.667 90 12 0 642 731 569393356 569393267 2.460000e-17 100.0
22 TraesCS5A01G229600 chr3A 81.667 120 20 2 653 771 480157902 480157784 8.830000e-17 99.0
23 TraesCS5A01G229600 chr3A 94.872 39 2 0 363 401 744096949 744096911 1.160000e-05 62.1
24 TraesCS5A01G229600 chr4A 86.076 79 10 1 653 731 681831099 681831022 2.470000e-12 84.2
25 TraesCS5A01G229600 chr4A 97.222 36 1 0 363 398 606341011 606341046 1.160000e-05 62.1
26 TraesCS5A01G229600 chr4D 80.220 91 14 4 302 389 67327855 67327766 8.960000e-07 65.8
27 TraesCS5A01G229600 chr2A 78.788 99 17 2 304 400 778140964 778141060 3.220000e-06 63.9
28 TraesCS5A01G229600 chr6B 96.774 31 1 0 364 394 469832167 469832137 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G229600 chr5A 445196608 445200470 3862 True 2524.000000 7134 97.512667 1 3863 3 chr5A.!!$R1 3862
1 TraesCS5A01G229600 chr5B 405551799 405554618 2819 True 2467.500000 4205 96.619500 926 3863 2 chr5B.!!$R2 2937
2 TraesCS5A01G229600 chr5D 345977543 345980964 3421 False 1714.333333 4193 89.611000 4 3863 3 chr5D.!!$F2 3859

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
469 495 0.105039 CTATCTCGTCCCCAGTTGCC 59.895 60.0 0.0 0.0 0.00 4.52 F
760 786 0.168788 TTGTCGTTCTACTACGCCGG 59.831 55.0 0.0 0.0 41.16 6.13 F
762 788 0.247854 GTCGTTCTACTACGCCGGTC 60.248 60.0 1.9 0.0 41.16 4.79 F
2229 2282 0.539438 TTGAGCCCAATGTGGTGACC 60.539 55.0 0.0 0.0 35.17 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2049 2102 0.250513 CTACCTGCACTTGACCTCCC 59.749 60.000 0.00 0.0 0.00 4.30 R
2718 2771 1.968017 AAGCATGCACTGTCCACGG 60.968 57.895 21.98 0.0 0.00 4.94 R
2833 2889 8.249638 TGTTTCAACAGTTTTGAGATCATTTGA 58.750 29.630 0.00 0.0 34.30 2.69 R
3483 3555 0.033991 TCTCTACTCCAAGCTCGGCT 60.034 55.000 0.00 0.0 42.56 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 68 4.955811 ACAGGATGACAACTGTGTTAGA 57.044 40.909 13.48 0.00 45.54 2.10
67 69 4.632153 ACAGGATGACAACTGTGTTAGAC 58.368 43.478 13.48 0.00 45.54 2.59
75 77 5.099042 ACAACTGTGTTAGACTGGTCTTT 57.901 39.130 8.60 0.00 40.93 2.52
79 81 5.360591 ACTGTGTTAGACTGGTCTTTTCAG 58.639 41.667 8.60 13.14 40.93 3.02
89 91 6.966534 ACTGGTCTTTTCAGTCAAAATCAT 57.033 33.333 0.00 0.00 41.10 2.45
150 152 9.881773 AATAATATGTGGTTGAATGGTTAGGAT 57.118 29.630 0.00 0.00 0.00 3.24
151 153 7.587037 AATATGTGGTTGAATGGTTAGGATG 57.413 36.000 0.00 0.00 0.00 3.51
157 159 5.249622 TGGTTGAATGGTTAGGATGACAGTA 59.750 40.000 0.00 0.00 0.00 2.74
163 165 6.576662 ATGGTTAGGATGACAGTAGTATCG 57.423 41.667 0.00 0.00 0.00 2.92
168 170 3.566322 AGGATGACAGTAGTATCGTCAGC 59.434 47.826 10.21 10.21 42.53 4.26
170 172 3.000684 TGACAGTAGTATCGTCAGCCT 57.999 47.619 1.57 0.00 34.83 4.58
172 174 3.875727 TGACAGTAGTATCGTCAGCCTAC 59.124 47.826 1.57 0.00 34.83 3.18
175 177 3.003482 CAGTAGTATCGTCAGCCTACCAC 59.997 52.174 0.00 0.00 32.12 4.16
204 216 1.270305 TGCTAGACTTGACACTGGTGC 60.270 52.381 0.00 0.00 0.00 5.01
206 218 2.548920 GCTAGACTTGACACTGGTGCTT 60.549 50.000 0.00 0.00 0.00 3.91
213 225 1.337703 TGACACTGGTGCTTGCATTTC 59.662 47.619 0.00 0.00 0.00 2.17
214 226 1.610522 GACACTGGTGCTTGCATTTCT 59.389 47.619 0.00 0.00 0.00 2.52
217 229 2.295349 CACTGGTGCTTGCATTTCTCTT 59.705 45.455 0.00 0.00 0.00 2.85
218 230 3.503363 CACTGGTGCTTGCATTTCTCTTA 59.497 43.478 0.00 0.00 0.00 2.10
223 235 5.927689 TGGTGCTTGCATTTCTCTTAATTTG 59.072 36.000 0.00 0.00 0.00 2.32
226 238 7.359514 GGTGCTTGCATTTCTCTTAATTTGTTC 60.360 37.037 0.00 0.00 0.00 3.18
256 268 1.154836 GCGTTTCGCGTTCAGTGAG 60.155 57.895 5.77 0.00 44.55 3.51
259 271 1.767289 GTTTCGCGTTCAGTGAGAGA 58.233 50.000 5.77 0.00 40.88 3.10
263 275 1.069159 TCGCGTTCAGTGAGAGAAGAC 60.069 52.381 5.77 0.00 33.87 3.01
264 276 1.068885 CGCGTTCAGTGAGAGAAGACT 60.069 52.381 0.00 0.00 0.00 3.24
266 278 3.385577 GCGTTCAGTGAGAGAAGACTTT 58.614 45.455 0.00 0.00 0.00 2.66
267 279 3.804873 GCGTTCAGTGAGAGAAGACTTTT 59.195 43.478 0.00 0.00 0.00 2.27
268 280 4.084797 GCGTTCAGTGAGAGAAGACTTTTC 60.085 45.833 0.00 0.00 0.00 2.29
270 282 4.244425 TCAGTGAGAGAAGACTTTTCGG 57.756 45.455 0.40 0.00 0.00 4.30
271 283 3.637229 TCAGTGAGAGAAGACTTTTCGGT 59.363 43.478 0.40 0.00 0.00 4.69
272 284 3.984633 CAGTGAGAGAAGACTTTTCGGTC 59.015 47.826 0.40 0.00 36.56 4.79
273 285 2.981140 GTGAGAGAAGACTTTTCGGTCG 59.019 50.000 0.40 0.00 40.76 4.79
274 286 2.621998 TGAGAGAAGACTTTTCGGTCGT 59.378 45.455 0.40 0.00 40.76 4.34
275 287 3.236005 GAGAGAAGACTTTTCGGTCGTC 58.764 50.000 0.40 0.00 42.21 4.20
279 291 3.893720 GAAGACTTTTCGGTCGTCTACA 58.106 45.455 0.00 0.00 40.03 2.74
317 329 7.331026 ACGGTTTTCTCAATCTCAAGATGATA 58.669 34.615 0.00 0.00 34.49 2.15
319 331 8.281194 CGGTTTTCTCAATCTCAAGATGATATG 58.719 37.037 0.00 0.00 34.49 1.78
320 332 9.118300 GGTTTTCTCAATCTCAAGATGATATGT 57.882 33.333 0.00 0.00 34.49 2.29
333 345 9.852091 TCAAGATGATATGTTATCTCAATCTCG 57.148 33.333 0.00 0.00 32.71 4.04
334 346 9.852091 CAAGATGATATGTTATCTCAATCTCGA 57.148 33.333 0.00 0.00 32.71 4.04
336 348 8.685427 AGATGATATGTTATCTCAATCTCGAGG 58.315 37.037 13.56 0.00 33.59 4.63
340 354 4.023980 TGTTATCTCAATCTCGAGGGTGT 58.976 43.478 13.56 0.00 33.59 4.16
342 356 5.046591 TGTTATCTCAATCTCGAGGGTGTTT 60.047 40.000 13.56 3.77 33.59 2.83
350 364 3.294214 TCTCGAGGGTGTTTATAGGGAC 58.706 50.000 13.56 0.00 0.00 4.46
352 366 3.443052 TCGAGGGTGTTTATAGGGACAA 58.557 45.455 0.00 0.00 0.00 3.18
359 373 4.820173 GGTGTTTATAGGGACAAGGTATGC 59.180 45.833 0.00 0.00 0.00 3.14
377 391 2.899976 TGCGTATGTGTGTTCATAGGG 58.100 47.619 0.00 0.00 36.95 3.53
379 393 2.419574 GCGTATGTGTGTTCATAGGGGT 60.420 50.000 0.00 0.00 36.95 4.95
380 394 3.194861 CGTATGTGTGTTCATAGGGGTG 58.805 50.000 0.00 0.00 34.54 4.61
388 414 4.081142 TGTGTTCATAGGGGTGAGTGTATG 60.081 45.833 0.00 0.00 0.00 2.39
394 420 2.621070 AGGGGTGAGTGTATGAGTGTT 58.379 47.619 0.00 0.00 0.00 3.32
397 423 2.484264 GGGTGAGTGTATGAGTGTTTGC 59.516 50.000 0.00 0.00 0.00 3.68
398 424 2.157668 GGTGAGTGTATGAGTGTTTGCG 59.842 50.000 0.00 0.00 0.00 4.85
408 434 3.418094 TGAGTGTTTGCGTGTTAAAACG 58.582 40.909 13.99 13.99 46.30 3.60
410 436 4.201832 TGAGTGTTTGCGTGTTAAAACGAT 60.202 37.500 22.21 0.00 46.49 3.73
411 437 5.006455 TGAGTGTTTGCGTGTTAAAACGATA 59.994 36.000 22.21 6.90 46.49 2.92
413 439 6.432107 AGTGTTTGCGTGTTAAAACGATAAT 58.568 32.000 22.21 0.00 46.49 1.28
415 441 8.068977 AGTGTTTGCGTGTTAAAACGATAATTA 58.931 29.630 22.21 5.57 46.49 1.40
416 442 8.842777 GTGTTTGCGTGTTAAAACGATAATTAT 58.157 29.630 22.21 0.00 46.49 1.28
417 443 8.841822 TGTTTGCGTGTTAAAACGATAATTATG 58.158 29.630 22.21 0.00 46.49 1.90
419 445 8.951954 TTGCGTGTTAAAACGATAATTATGTT 57.048 26.923 22.21 5.26 46.49 2.71
421 447 9.053135 TGCGTGTTAAAACGATAATTATGTTTC 57.947 29.630 22.21 0.00 46.49 2.78
422 448 8.517862 GCGTGTTAAAACGATAATTATGTTTCC 58.482 33.333 22.21 12.96 46.49 3.13
423 449 9.763465 CGTGTTAAAACGATAATTATGTTTCCT 57.237 29.630 13.04 11.22 46.49 3.36
428 454 6.619801 AACGATAATTATGTTTCCTCTGCC 57.380 37.500 1.78 0.00 0.00 4.85
430 456 5.992217 ACGATAATTATGTTTCCTCTGCCTC 59.008 40.000 1.78 0.00 0.00 4.70
432 458 3.584733 ATTATGTTTCCTCTGCCTCCC 57.415 47.619 0.00 0.00 0.00 4.30
433 459 0.830648 TATGTTTCCTCTGCCTCCCG 59.169 55.000 0.00 0.00 0.00 5.14
434 460 2.436824 GTTTCCTCTGCCTCCCGC 60.437 66.667 0.00 0.00 38.31 6.13
457 483 2.248724 CGTCGCCGGTCTATCTCG 59.751 66.667 1.90 0.00 0.00 4.04
458 484 2.532256 CGTCGCCGGTCTATCTCGT 61.532 63.158 1.90 0.00 0.00 4.18
459 485 1.279238 GTCGCCGGTCTATCTCGTC 59.721 63.158 1.90 0.00 0.00 4.20
460 486 1.890979 TCGCCGGTCTATCTCGTCC 60.891 63.158 1.90 0.00 0.00 4.79
461 487 2.905807 CGCCGGTCTATCTCGTCCC 61.906 68.421 1.90 0.00 0.00 4.46
462 488 2.562876 GCCGGTCTATCTCGTCCCC 61.563 68.421 1.90 0.00 0.00 4.81
463 489 1.152819 CCGGTCTATCTCGTCCCCA 60.153 63.158 0.00 0.00 0.00 4.96
464 490 1.173444 CCGGTCTATCTCGTCCCCAG 61.173 65.000 0.00 0.00 0.00 4.45
465 491 0.465824 CGGTCTATCTCGTCCCCAGT 60.466 60.000 0.00 0.00 0.00 4.00
466 492 1.777941 GGTCTATCTCGTCCCCAGTT 58.222 55.000 0.00 0.00 0.00 3.16
467 493 1.409427 GGTCTATCTCGTCCCCAGTTG 59.591 57.143 0.00 0.00 0.00 3.16
468 494 1.112113 TCTATCTCGTCCCCAGTTGC 58.888 55.000 0.00 0.00 0.00 4.17
469 495 0.105039 CTATCTCGTCCCCAGTTGCC 59.895 60.000 0.00 0.00 0.00 4.52
470 496 0.325296 TATCTCGTCCCCAGTTGCCT 60.325 55.000 0.00 0.00 0.00 4.75
471 497 1.201429 ATCTCGTCCCCAGTTGCCTT 61.201 55.000 0.00 0.00 0.00 4.35
472 498 0.543410 TCTCGTCCCCAGTTGCCTTA 60.543 55.000 0.00 0.00 0.00 2.69
473 499 0.323629 CTCGTCCCCAGTTGCCTTAA 59.676 55.000 0.00 0.00 0.00 1.85
474 500 0.323629 TCGTCCCCAGTTGCCTTAAG 59.676 55.000 0.00 0.00 0.00 1.85
475 501 0.676782 CGTCCCCAGTTGCCTTAAGG 60.677 60.000 17.81 17.81 38.53 2.69
504 530 4.109675 CGGTGAATCCCGGCCCTT 62.110 66.667 0.00 0.00 44.32 3.95
505 531 2.440247 GGTGAATCCCGGCCCTTG 60.440 66.667 0.00 0.00 0.00 3.61
506 532 3.140814 GTGAATCCCGGCCCTTGC 61.141 66.667 0.00 0.00 0.00 4.01
525 551 4.035102 GGCGGGAGGGCTCTGTTT 62.035 66.667 0.00 0.00 38.40 2.83
526 552 2.034221 GCGGGAGGGCTCTGTTTT 59.966 61.111 0.00 0.00 0.00 2.43
527 553 2.041115 GCGGGAGGGCTCTGTTTTC 61.041 63.158 0.00 0.00 0.00 2.29
528 554 1.374947 CGGGAGGGCTCTGTTTTCA 59.625 57.895 0.00 0.00 0.00 2.69
529 555 0.250727 CGGGAGGGCTCTGTTTTCAA 60.251 55.000 0.00 0.00 0.00 2.69
530 556 1.817740 CGGGAGGGCTCTGTTTTCAAA 60.818 52.381 0.00 0.00 0.00 2.69
531 557 2.529632 GGGAGGGCTCTGTTTTCAAAT 58.470 47.619 0.00 0.00 0.00 2.32
532 558 2.232208 GGGAGGGCTCTGTTTTCAAATG 59.768 50.000 0.00 0.00 0.00 2.32
533 559 2.893489 GGAGGGCTCTGTTTTCAAATGT 59.107 45.455 0.00 0.00 0.00 2.71
534 560 3.321968 GGAGGGCTCTGTTTTCAAATGTT 59.678 43.478 0.00 0.00 0.00 2.71
535 561 4.202253 GGAGGGCTCTGTTTTCAAATGTTT 60.202 41.667 0.00 0.00 0.00 2.83
536 562 5.010617 GGAGGGCTCTGTTTTCAAATGTTTA 59.989 40.000 0.00 0.00 0.00 2.01
537 563 6.295292 GGAGGGCTCTGTTTTCAAATGTTTAT 60.295 38.462 0.00 0.00 0.00 1.40
538 564 7.066307 AGGGCTCTGTTTTCAAATGTTTATT 57.934 32.000 0.00 0.00 0.00 1.40
539 565 7.154656 AGGGCTCTGTTTTCAAATGTTTATTC 58.845 34.615 0.00 0.00 0.00 1.75
540 566 6.928492 GGGCTCTGTTTTCAAATGTTTATTCA 59.072 34.615 0.00 0.00 0.00 2.57
541 567 7.440856 GGGCTCTGTTTTCAAATGTTTATTCAA 59.559 33.333 0.00 0.00 0.00 2.69
542 568 8.490355 GGCTCTGTTTTCAAATGTTTATTCAAG 58.510 33.333 0.00 0.00 0.00 3.02
543 569 9.034544 GCTCTGTTTTCAAATGTTTATTCAAGT 57.965 29.630 0.00 0.00 0.00 3.16
556 582 9.758651 ATGTTTATTCAAGTTTTGTTAGGGTTC 57.241 29.630 0.00 0.00 0.00 3.62
557 583 8.750298 TGTTTATTCAAGTTTTGTTAGGGTTCA 58.250 29.630 0.00 0.00 0.00 3.18
558 584 9.758651 GTTTATTCAAGTTTTGTTAGGGTTCAT 57.241 29.630 0.00 0.00 0.00 2.57
559 585 9.757227 TTTATTCAAGTTTTGTTAGGGTTCATG 57.243 29.630 0.00 0.00 0.00 3.07
560 586 6.783708 TTCAAGTTTTGTTAGGGTTCATGT 57.216 33.333 0.00 0.00 0.00 3.21
561 587 6.385649 TCAAGTTTTGTTAGGGTTCATGTC 57.614 37.500 0.00 0.00 0.00 3.06
562 588 5.300792 TCAAGTTTTGTTAGGGTTCATGTCC 59.699 40.000 0.00 0.00 0.00 4.02
563 589 5.061721 AGTTTTGTTAGGGTTCATGTCCT 57.938 39.130 9.27 9.27 37.18 3.85
564 590 6.195600 AGTTTTGTTAGGGTTCATGTCCTA 57.804 37.500 8.91 8.30 34.75 2.94
565 591 6.790319 AGTTTTGTTAGGGTTCATGTCCTAT 58.210 36.000 11.09 4.26 35.75 2.57
566 592 7.238710 AGTTTTGTTAGGGTTCATGTCCTATT 58.761 34.615 11.09 2.27 35.75 1.73
567 593 7.393515 AGTTTTGTTAGGGTTCATGTCCTATTC 59.606 37.037 11.09 9.05 35.75 1.75
568 594 6.381498 TTGTTAGGGTTCATGTCCTATTCA 57.619 37.500 11.09 10.68 35.75 2.57
569 595 5.989477 TGTTAGGGTTCATGTCCTATTCAG 58.011 41.667 11.09 0.00 35.75 3.02
570 596 5.724370 TGTTAGGGTTCATGTCCTATTCAGA 59.276 40.000 11.09 0.00 35.75 3.27
571 597 6.214615 TGTTAGGGTTCATGTCCTATTCAGAA 59.785 38.462 11.09 0.00 35.75 3.02
572 598 5.779241 AGGGTTCATGTCCTATTCAGAAA 57.221 39.130 8.91 0.00 0.00 2.52
573 599 5.749462 AGGGTTCATGTCCTATTCAGAAAG 58.251 41.667 8.91 0.00 0.00 2.62
574 600 5.488919 AGGGTTCATGTCCTATTCAGAAAGA 59.511 40.000 8.91 0.00 0.00 2.52
575 601 5.586643 GGGTTCATGTCCTATTCAGAAAGAC 59.413 44.000 8.91 4.97 0.00 3.01
576 602 5.292101 GGTTCATGTCCTATTCAGAAAGACG 59.708 44.000 0.00 0.00 0.00 4.18
577 603 5.914898 TCATGTCCTATTCAGAAAGACGA 57.085 39.130 0.00 0.00 0.00 4.20
578 604 5.895928 TCATGTCCTATTCAGAAAGACGAG 58.104 41.667 0.00 3.35 0.00 4.18
579 605 5.652452 TCATGTCCTATTCAGAAAGACGAGA 59.348 40.000 0.00 5.01 0.00 4.04
580 606 5.312120 TGTCCTATTCAGAAAGACGAGAC 57.688 43.478 0.00 0.00 0.00 3.36
581 607 4.142665 TGTCCTATTCAGAAAGACGAGACG 60.143 45.833 0.00 0.00 0.00 4.18
582 608 4.094590 GTCCTATTCAGAAAGACGAGACGA 59.905 45.833 0.00 0.00 0.00 4.20
583 609 4.094590 TCCTATTCAGAAAGACGAGACGAC 59.905 45.833 0.00 0.00 0.00 4.34
584 610 2.311450 TTCAGAAAGACGAGACGACG 57.689 50.000 0.00 0.00 39.31 5.12
585 611 0.516001 TCAGAAAGACGAGACGACGG 59.484 55.000 0.00 0.00 37.61 4.79
586 612 0.516001 CAGAAAGACGAGACGACGGA 59.484 55.000 0.00 0.00 37.61 4.69
587 613 0.797542 AGAAAGACGAGACGACGGAG 59.202 55.000 0.00 0.00 37.61 4.63
588 614 0.179194 GAAAGACGAGACGACGGAGG 60.179 60.000 0.00 0.00 37.61 4.30
589 615 2.197643 AAAGACGAGACGACGGAGGC 62.198 60.000 0.00 0.00 37.61 4.70
590 616 3.126225 GACGAGACGACGGAGGCT 61.126 66.667 0.00 0.00 37.61 4.58
591 617 3.098377 GACGAGACGACGGAGGCTC 62.098 68.421 5.78 5.78 37.61 4.70
592 618 3.878519 CGAGACGACGGAGGCTCC 61.879 72.222 24.06 24.06 0.00 4.70
593 619 2.438795 GAGACGACGGAGGCTCCT 60.439 66.667 29.81 17.47 33.30 3.69
594 620 2.035940 AGACGACGGAGGCTCCTT 59.964 61.111 29.81 22.35 33.30 3.36
595 621 0.747283 GAGACGACGGAGGCTCCTTA 60.747 60.000 29.81 0.00 33.30 2.69
596 622 0.323178 AGACGACGGAGGCTCCTTAA 60.323 55.000 29.81 0.00 33.30 1.85
597 623 0.529378 GACGACGGAGGCTCCTTAAA 59.471 55.000 29.81 0.00 33.30 1.52
598 624 0.531200 ACGACGGAGGCTCCTTAAAG 59.469 55.000 29.81 16.88 33.30 1.85
599 625 0.815734 CGACGGAGGCTCCTTAAAGA 59.184 55.000 29.81 0.00 33.30 2.52
600 626 1.409427 CGACGGAGGCTCCTTAAAGAT 59.591 52.381 29.81 7.49 33.30 2.40
601 627 2.544069 CGACGGAGGCTCCTTAAAGATC 60.544 54.545 29.81 14.29 33.30 2.75
602 628 1.763545 ACGGAGGCTCCTTAAAGATCC 59.236 52.381 29.81 1.86 33.30 3.36
603 629 1.070914 CGGAGGCTCCTTAAAGATCCC 59.929 57.143 29.81 1.00 33.30 3.85
604 630 1.070914 GGAGGCTCCTTAAAGATCCCG 59.929 57.143 26.44 0.00 32.53 5.14
605 631 2.040178 GAGGCTCCTTAAAGATCCCGA 58.960 52.381 2.15 0.00 0.00 5.14
606 632 2.635427 GAGGCTCCTTAAAGATCCCGAT 59.365 50.000 2.15 0.00 0.00 4.18
607 633 2.370189 AGGCTCCTTAAAGATCCCGATG 59.630 50.000 0.00 0.00 0.00 3.84
608 634 2.368875 GGCTCCTTAAAGATCCCGATGA 59.631 50.000 0.00 0.00 0.00 2.92
609 635 3.008485 GGCTCCTTAAAGATCCCGATGAT 59.992 47.826 0.00 0.00 36.01 2.45
610 636 3.999663 GCTCCTTAAAGATCCCGATGATG 59.000 47.826 0.00 0.00 32.41 3.07
611 637 4.503991 GCTCCTTAAAGATCCCGATGATGT 60.504 45.833 0.00 0.00 32.41 3.06
612 638 4.960938 TCCTTAAAGATCCCGATGATGTG 58.039 43.478 0.00 0.00 32.41 3.21
613 639 4.408921 TCCTTAAAGATCCCGATGATGTGT 59.591 41.667 0.00 0.00 32.41 3.72
614 640 4.752101 CCTTAAAGATCCCGATGATGTGTC 59.248 45.833 0.00 0.00 32.41 3.67
615 641 5.453903 CCTTAAAGATCCCGATGATGTGTCT 60.454 44.000 0.00 0.00 32.41 3.41
616 642 6.239317 CCTTAAAGATCCCGATGATGTGTCTA 60.239 42.308 0.00 0.00 32.41 2.59
617 643 4.862902 AAGATCCCGATGATGTGTCTAG 57.137 45.455 0.00 0.00 32.41 2.43
618 644 2.560542 AGATCCCGATGATGTGTCTAGC 59.439 50.000 0.00 0.00 32.41 3.42
619 645 1.775385 TCCCGATGATGTGTCTAGCA 58.225 50.000 0.00 0.00 0.00 3.49
620 646 2.319844 TCCCGATGATGTGTCTAGCAT 58.680 47.619 0.00 0.00 0.00 3.79
621 647 2.700371 TCCCGATGATGTGTCTAGCATT 59.300 45.455 0.00 0.00 0.00 3.56
622 648 3.895041 TCCCGATGATGTGTCTAGCATTA 59.105 43.478 0.00 0.00 0.00 1.90
623 649 4.528206 TCCCGATGATGTGTCTAGCATTAT 59.472 41.667 0.00 0.00 0.00 1.28
624 650 5.012046 TCCCGATGATGTGTCTAGCATTATT 59.988 40.000 0.00 0.00 0.00 1.40
625 651 5.121298 CCCGATGATGTGTCTAGCATTATTG 59.879 44.000 0.00 0.00 0.00 1.90
626 652 5.121298 CCGATGATGTGTCTAGCATTATTGG 59.879 44.000 5.85 5.85 37.46 3.16
627 653 5.121298 CGATGATGTGTCTAGCATTATTGGG 59.879 44.000 0.00 0.00 0.00 4.12
628 654 5.628797 TGATGTGTCTAGCATTATTGGGA 57.371 39.130 0.00 0.00 0.00 4.37
629 655 5.614308 TGATGTGTCTAGCATTATTGGGAG 58.386 41.667 0.00 0.00 0.00 4.30
630 656 4.422073 TGTGTCTAGCATTATTGGGAGG 57.578 45.455 0.00 0.00 0.00 4.30
631 657 3.142174 GTGTCTAGCATTATTGGGAGGC 58.858 50.000 0.00 0.00 0.00 4.70
632 658 2.224281 TGTCTAGCATTATTGGGAGGCG 60.224 50.000 0.00 0.00 0.00 5.52
633 659 2.047061 TCTAGCATTATTGGGAGGCGT 58.953 47.619 0.00 0.00 0.00 5.68
634 660 2.146342 CTAGCATTATTGGGAGGCGTG 58.854 52.381 0.00 0.00 0.00 5.34
635 661 0.255890 AGCATTATTGGGAGGCGTGT 59.744 50.000 0.00 0.00 0.00 4.49
636 662 0.381801 GCATTATTGGGAGGCGTGTG 59.618 55.000 0.00 0.00 0.00 3.82
637 663 2.016604 GCATTATTGGGAGGCGTGTGA 61.017 52.381 0.00 0.00 0.00 3.58
638 664 2.364632 CATTATTGGGAGGCGTGTGAA 58.635 47.619 0.00 0.00 0.00 3.18
639 665 2.107950 TTATTGGGAGGCGTGTGAAG 57.892 50.000 0.00 0.00 0.00 3.02
640 666 1.271856 TATTGGGAGGCGTGTGAAGA 58.728 50.000 0.00 0.00 0.00 2.87
641 667 0.620556 ATTGGGAGGCGTGTGAAGAT 59.379 50.000 0.00 0.00 0.00 2.40
642 668 0.321564 TTGGGAGGCGTGTGAAGATG 60.322 55.000 0.00 0.00 0.00 2.90
643 669 1.296715 GGGAGGCGTGTGAAGATGT 59.703 57.895 0.00 0.00 0.00 3.06
644 670 0.741221 GGGAGGCGTGTGAAGATGTC 60.741 60.000 0.00 0.00 0.00 3.06
645 671 0.741221 GGAGGCGTGTGAAGATGTCC 60.741 60.000 0.00 0.00 0.00 4.02
646 672 0.247736 GAGGCGTGTGAAGATGTCCT 59.752 55.000 0.00 0.00 0.00 3.85
647 673 0.687354 AGGCGTGTGAAGATGTCCTT 59.313 50.000 0.00 0.00 37.93 3.36
648 674 1.899814 AGGCGTGTGAAGATGTCCTTA 59.100 47.619 0.00 0.00 34.68 2.69
649 675 2.301870 AGGCGTGTGAAGATGTCCTTAA 59.698 45.455 0.00 0.00 34.68 1.85
650 676 3.055094 AGGCGTGTGAAGATGTCCTTAAT 60.055 43.478 0.00 0.00 34.68 1.40
651 677 4.161565 AGGCGTGTGAAGATGTCCTTAATA 59.838 41.667 0.00 0.00 34.68 0.98
652 678 4.508124 GGCGTGTGAAGATGTCCTTAATAG 59.492 45.833 0.00 0.00 34.68 1.73
653 679 5.348986 GCGTGTGAAGATGTCCTTAATAGA 58.651 41.667 0.00 0.00 34.68 1.98
654 680 5.986135 GCGTGTGAAGATGTCCTTAATAGAT 59.014 40.000 0.00 0.00 34.68 1.98
655 681 6.480320 GCGTGTGAAGATGTCCTTAATAGATT 59.520 38.462 0.00 0.00 34.68 2.40
656 682 7.011482 GCGTGTGAAGATGTCCTTAATAGATTT 59.989 37.037 0.00 0.00 34.68 2.17
657 683 8.331022 CGTGTGAAGATGTCCTTAATAGATTTG 58.669 37.037 0.00 0.00 34.68 2.32
658 684 8.125448 GTGTGAAGATGTCCTTAATAGATTTGC 58.875 37.037 0.00 0.00 34.68 3.68
659 685 8.049117 TGTGAAGATGTCCTTAATAGATTTGCT 58.951 33.333 0.00 0.00 34.68 3.91
660 686 8.555361 GTGAAGATGTCCTTAATAGATTTGCTC 58.445 37.037 0.00 0.00 34.68 4.26
661 687 7.439356 TGAAGATGTCCTTAATAGATTTGCTCG 59.561 37.037 0.00 0.00 34.68 5.03
662 688 6.226787 AGATGTCCTTAATAGATTTGCTCGG 58.773 40.000 0.00 0.00 0.00 4.63
663 689 5.607939 TGTCCTTAATAGATTTGCTCGGA 57.392 39.130 0.00 0.00 0.00 4.55
664 690 6.174720 TGTCCTTAATAGATTTGCTCGGAT 57.825 37.500 0.00 0.00 0.00 4.18
665 691 6.223852 TGTCCTTAATAGATTTGCTCGGATC 58.776 40.000 0.00 0.00 0.00 3.36
666 692 6.042093 TGTCCTTAATAGATTTGCTCGGATCT 59.958 38.462 0.00 0.00 36.61 2.75
667 693 6.367422 GTCCTTAATAGATTTGCTCGGATCTG 59.633 42.308 0.00 0.00 34.60 2.90
668 694 6.267699 TCCTTAATAGATTTGCTCGGATCTGA 59.732 38.462 3.71 3.71 34.60 3.27
669 695 6.367422 CCTTAATAGATTTGCTCGGATCTGAC 59.633 42.308 0.00 0.00 34.60 3.51
670 696 2.611225 AGATTTGCTCGGATCTGACC 57.389 50.000 0.00 0.00 31.65 4.02
680 706 3.001395 CGGATCTGACCGTACTTCATC 57.999 52.381 0.00 0.00 46.70 2.92
681 707 2.619177 CGGATCTGACCGTACTTCATCT 59.381 50.000 0.00 0.00 46.70 2.90
682 708 3.813724 CGGATCTGACCGTACTTCATCTA 59.186 47.826 0.00 0.00 46.70 1.98
683 709 4.319622 CGGATCTGACCGTACTTCATCTAC 60.320 50.000 0.00 0.00 46.70 2.59
684 710 4.579340 GGATCTGACCGTACTTCATCTACA 59.421 45.833 0.00 0.00 0.00 2.74
685 711 5.241949 GGATCTGACCGTACTTCATCTACAT 59.758 44.000 0.00 0.00 0.00 2.29
686 712 6.239064 GGATCTGACCGTACTTCATCTACATT 60.239 42.308 0.00 0.00 0.00 2.71
687 713 6.132791 TCTGACCGTACTTCATCTACATTC 57.867 41.667 0.00 0.00 0.00 2.67
688 714 4.916870 TGACCGTACTTCATCTACATTCG 58.083 43.478 0.00 0.00 0.00 3.34
689 715 4.397103 TGACCGTACTTCATCTACATTCGT 59.603 41.667 0.00 0.00 0.00 3.85
690 716 4.669318 ACCGTACTTCATCTACATTCGTG 58.331 43.478 0.00 0.00 0.00 4.35
691 717 4.157289 ACCGTACTTCATCTACATTCGTGT 59.843 41.667 0.00 0.00 0.00 4.49
692 718 4.499399 CCGTACTTCATCTACATTCGTGTG 59.501 45.833 0.00 0.00 0.00 3.82
693 719 5.093457 CGTACTTCATCTACATTCGTGTGT 58.907 41.667 0.00 1.51 36.13 3.72
694 720 5.571741 CGTACTTCATCTACATTCGTGTGTT 59.428 40.000 1.17 0.00 33.62 3.32
695 721 6.089016 CGTACTTCATCTACATTCGTGTGTTT 59.911 38.462 1.17 0.00 33.62 2.83
696 722 6.861065 ACTTCATCTACATTCGTGTGTTTT 57.139 33.333 1.17 0.00 33.62 2.43
697 723 6.888430 ACTTCATCTACATTCGTGTGTTTTC 58.112 36.000 1.17 0.00 33.62 2.29
698 724 6.481976 ACTTCATCTACATTCGTGTGTTTTCA 59.518 34.615 1.17 0.00 33.62 2.69
699 725 7.173218 ACTTCATCTACATTCGTGTGTTTTCAT 59.827 33.333 1.17 0.00 33.62 2.57
700 726 6.830736 TCATCTACATTCGTGTGTTTTCATG 58.169 36.000 1.17 0.00 33.62 3.07
701 727 6.426633 TCATCTACATTCGTGTGTTTTCATGT 59.573 34.615 0.00 0.00 33.62 3.21
702 728 6.612247 TCTACATTCGTGTGTTTTCATGTT 57.388 33.333 0.00 0.00 33.62 2.71
703 729 6.426327 TCTACATTCGTGTGTTTTCATGTTG 58.574 36.000 0.00 0.00 33.62 3.33
704 730 4.358851 ACATTCGTGTGTTTTCATGTTGG 58.641 39.130 0.00 0.00 0.00 3.77
705 731 4.097135 ACATTCGTGTGTTTTCATGTTGGA 59.903 37.500 0.00 0.00 0.00 3.53
706 732 4.909696 TTCGTGTGTTTTCATGTTGGAT 57.090 36.364 0.00 0.00 0.00 3.41
707 733 4.481930 TCGTGTGTTTTCATGTTGGATC 57.518 40.909 0.00 0.00 0.00 3.36
708 734 3.252215 TCGTGTGTTTTCATGTTGGATCC 59.748 43.478 4.20 4.20 0.00 3.36
709 735 3.253188 CGTGTGTTTTCATGTTGGATCCT 59.747 43.478 14.23 0.00 0.00 3.24
710 736 4.261572 CGTGTGTTTTCATGTTGGATCCTT 60.262 41.667 14.23 0.00 0.00 3.36
711 737 5.222631 GTGTGTTTTCATGTTGGATCCTTC 58.777 41.667 14.23 6.55 0.00 3.46
712 738 5.010012 GTGTGTTTTCATGTTGGATCCTTCT 59.990 40.000 14.23 0.00 0.00 2.85
713 739 6.206634 GTGTGTTTTCATGTTGGATCCTTCTA 59.793 38.462 14.23 0.00 0.00 2.10
714 740 6.775142 TGTGTTTTCATGTTGGATCCTTCTAA 59.225 34.615 14.23 0.00 0.00 2.10
715 741 7.451255 TGTGTTTTCATGTTGGATCCTTCTAAT 59.549 33.333 14.23 0.00 0.00 1.73
716 742 7.970614 GTGTTTTCATGTTGGATCCTTCTAATC 59.029 37.037 14.23 0.00 0.00 1.75
717 743 7.890127 TGTTTTCATGTTGGATCCTTCTAATCT 59.110 33.333 14.23 0.00 0.00 2.40
718 744 9.396022 GTTTTCATGTTGGATCCTTCTAATCTA 57.604 33.333 14.23 0.00 0.00 1.98
719 745 8.964476 TTTCATGTTGGATCCTTCTAATCTAC 57.036 34.615 14.23 0.00 0.00 2.59
720 746 6.749139 TCATGTTGGATCCTTCTAATCTACG 58.251 40.000 14.23 0.00 0.00 3.51
721 747 4.945246 TGTTGGATCCTTCTAATCTACGC 58.055 43.478 14.23 0.00 0.00 4.42
722 748 4.649674 TGTTGGATCCTTCTAATCTACGCT 59.350 41.667 14.23 0.00 0.00 5.07
723 749 5.831525 TGTTGGATCCTTCTAATCTACGCTA 59.168 40.000 14.23 0.00 0.00 4.26
724 750 5.961396 TGGATCCTTCTAATCTACGCTAC 57.039 43.478 14.23 0.00 0.00 3.58
725 751 5.632118 TGGATCCTTCTAATCTACGCTACT 58.368 41.667 14.23 0.00 0.00 2.57
726 752 5.706369 TGGATCCTTCTAATCTACGCTACTC 59.294 44.000 14.23 0.00 0.00 2.59
727 753 5.941647 GGATCCTTCTAATCTACGCTACTCT 59.058 44.000 3.84 0.00 0.00 3.24
728 754 6.431852 GGATCCTTCTAATCTACGCTACTCTT 59.568 42.308 3.84 0.00 0.00 2.85
729 755 6.864360 TCCTTCTAATCTACGCTACTCTTC 57.136 41.667 0.00 0.00 0.00 2.87
730 756 6.354938 TCCTTCTAATCTACGCTACTCTTCA 58.645 40.000 0.00 0.00 0.00 3.02
731 757 6.999272 TCCTTCTAATCTACGCTACTCTTCAT 59.001 38.462 0.00 0.00 0.00 2.57
732 758 7.173562 TCCTTCTAATCTACGCTACTCTTCATC 59.826 40.741 0.00 0.00 0.00 2.92
733 759 7.041030 CCTTCTAATCTACGCTACTCTTCATCA 60.041 40.741 0.00 0.00 0.00 3.07
734 760 7.428282 TCTAATCTACGCTACTCTTCATCAG 57.572 40.000 0.00 0.00 0.00 2.90
735 761 3.972950 TCTACGCTACTCTTCATCAGC 57.027 47.619 0.00 0.00 0.00 4.26
736 762 3.279434 TCTACGCTACTCTTCATCAGCA 58.721 45.455 0.00 0.00 33.55 4.41
737 763 2.285827 ACGCTACTCTTCATCAGCAC 57.714 50.000 0.00 0.00 33.55 4.40
738 764 1.821753 ACGCTACTCTTCATCAGCACT 59.178 47.619 0.00 0.00 33.55 4.40
739 765 3.017442 ACGCTACTCTTCATCAGCACTA 58.983 45.455 0.00 0.00 33.55 2.74
740 766 3.066064 ACGCTACTCTTCATCAGCACTAG 59.934 47.826 0.00 0.00 33.55 2.57
741 767 3.066064 CGCTACTCTTCATCAGCACTAGT 59.934 47.826 0.00 0.00 33.55 2.57
742 768 4.439426 CGCTACTCTTCATCAGCACTAGTT 60.439 45.833 0.00 0.00 33.55 2.24
743 769 4.803088 GCTACTCTTCATCAGCACTAGTTG 59.197 45.833 0.00 0.00 34.13 3.16
744 770 4.881019 ACTCTTCATCAGCACTAGTTGT 57.119 40.909 0.00 0.00 0.00 3.32
745 771 4.815269 ACTCTTCATCAGCACTAGTTGTC 58.185 43.478 0.00 0.00 0.00 3.18
746 772 3.838120 TCTTCATCAGCACTAGTTGTCG 58.162 45.455 0.00 0.00 0.00 4.35
747 773 3.255888 TCTTCATCAGCACTAGTTGTCGT 59.744 43.478 0.00 0.00 0.00 4.34
748 774 3.660501 TCATCAGCACTAGTTGTCGTT 57.339 42.857 0.00 0.00 0.00 3.85
749 775 3.575630 TCATCAGCACTAGTTGTCGTTC 58.424 45.455 0.00 0.00 0.00 3.95
750 776 3.255888 TCATCAGCACTAGTTGTCGTTCT 59.744 43.478 0.00 0.00 0.00 3.01
751 777 4.457949 TCATCAGCACTAGTTGTCGTTCTA 59.542 41.667 0.00 0.00 0.00 2.10
752 778 4.156664 TCAGCACTAGTTGTCGTTCTAC 57.843 45.455 0.00 0.00 0.00 2.59
753 779 3.819337 TCAGCACTAGTTGTCGTTCTACT 59.181 43.478 0.00 0.00 36.28 2.57
754 780 4.999311 TCAGCACTAGTTGTCGTTCTACTA 59.001 41.667 0.00 0.00 34.37 1.82
755 781 5.087397 CAGCACTAGTTGTCGTTCTACTAC 58.913 45.833 0.00 0.00 34.37 2.73
756 782 4.087265 GCACTAGTTGTCGTTCTACTACG 58.913 47.826 0.00 0.00 42.68 3.51
757 783 4.087265 CACTAGTTGTCGTTCTACTACGC 58.913 47.826 0.00 0.00 41.16 4.42
758 784 2.626088 AGTTGTCGTTCTACTACGCC 57.374 50.000 0.00 0.00 41.16 5.68
759 785 1.135859 AGTTGTCGTTCTACTACGCCG 60.136 52.381 0.00 0.00 41.16 6.46
760 786 0.168788 TTGTCGTTCTACTACGCCGG 59.831 55.000 0.00 0.00 41.16 6.13
761 787 0.955428 TGTCGTTCTACTACGCCGGT 60.955 55.000 1.90 0.00 41.16 5.28
762 788 0.247854 GTCGTTCTACTACGCCGGTC 60.248 60.000 1.90 0.00 41.16 4.79
763 789 1.063166 CGTTCTACTACGCCGGTCC 59.937 63.158 1.90 0.00 34.45 4.46
764 790 1.372087 CGTTCTACTACGCCGGTCCT 61.372 60.000 1.90 0.00 34.45 3.85
765 791 1.668419 GTTCTACTACGCCGGTCCTA 58.332 55.000 1.90 0.00 0.00 2.94
766 792 2.225467 GTTCTACTACGCCGGTCCTAT 58.775 52.381 1.90 0.00 0.00 2.57
767 793 1.888215 TCTACTACGCCGGTCCTATG 58.112 55.000 1.90 0.00 0.00 2.23
768 794 1.417517 TCTACTACGCCGGTCCTATGA 59.582 52.381 1.90 0.00 0.00 2.15
769 795 1.805345 CTACTACGCCGGTCCTATGAG 59.195 57.143 1.90 0.00 0.00 2.90
770 796 0.822532 ACTACGCCGGTCCTATGAGG 60.823 60.000 1.90 0.00 36.46 3.86
771 797 2.143594 CTACGCCGGTCCTATGAGGC 62.144 65.000 1.90 0.00 45.67 4.70
772 798 4.301027 CGCCGGTCCTATGAGGCC 62.301 72.222 1.90 0.00 46.36 5.19
773 799 2.844839 GCCGGTCCTATGAGGCCT 60.845 66.667 3.86 3.86 43.54 5.19
774 800 2.873525 GCCGGTCCTATGAGGCCTC 61.874 68.421 26.78 26.78 43.54 4.70
775 801 1.152440 CCGGTCCTATGAGGCCTCT 60.152 63.158 32.28 20.00 34.61 3.69
864 903 3.988379 TTTGAAAAACTGCATCGAGCT 57.012 38.095 8.07 0.00 45.94 4.09
865 904 2.975410 TGAAAAACTGCATCGAGCTG 57.025 45.000 0.00 10.57 45.94 4.24
866 905 2.493035 TGAAAAACTGCATCGAGCTGA 58.507 42.857 16.39 0.00 44.15 4.26
867 906 2.877786 TGAAAAACTGCATCGAGCTGAA 59.122 40.909 16.39 0.00 44.15 3.02
868 907 3.503363 TGAAAAACTGCATCGAGCTGAAT 59.497 39.130 16.39 6.12 44.15 2.57
869 908 3.754188 AAAACTGCATCGAGCTGAATC 57.246 42.857 16.39 0.00 44.15 2.52
870 909 2.687700 AACTGCATCGAGCTGAATCT 57.312 45.000 16.39 0.00 44.15 2.40
871 910 1.937278 ACTGCATCGAGCTGAATCTG 58.063 50.000 16.39 0.00 44.15 2.90
872 911 1.218763 CTGCATCGAGCTGAATCTGG 58.781 55.000 0.00 0.00 44.15 3.86
873 912 0.812811 TGCATCGAGCTGAATCTGGC 60.813 55.000 0.00 0.00 45.94 4.85
910 949 2.274645 CCTTGCCCAACCGCATCAA 61.275 57.895 0.00 0.00 38.87 2.57
912 951 2.801113 CTTGCCCAACCGCATCAACG 62.801 60.000 0.00 0.00 38.87 4.10
918 964 2.094659 AACCGCATCAACGAGCTCG 61.095 57.895 33.45 33.45 46.33 5.03
954 1000 2.095718 GCAGTCAAATTCCCAGTCGAAC 60.096 50.000 0.00 0.00 0.00 3.95
1179 1232 4.103103 GCCGCGGCCAAGAACTTC 62.103 66.667 39.89 7.71 34.56 3.01
1277 1330 4.828925 GCTCGCCTCCAGCTCCAC 62.829 72.222 0.00 0.00 40.39 4.02
1623 1676 1.197036 TCGACGATGATATCCGCACTC 59.803 52.381 0.00 0.00 0.00 3.51
1641 1694 1.812922 CTGTGACGAGGGCTGCATC 60.813 63.158 0.50 0.00 0.00 3.91
1744 1797 1.735386 CCACTGCAAGAGAGATGGTG 58.265 55.000 0.00 0.00 37.43 4.17
1791 1844 2.611722 GGAACTGCTGAAGAGTGGTCTC 60.612 54.545 0.00 0.00 40.70 3.36
1987 2040 6.319658 AGCATTAACAGTTTATGAGGACATGG 59.680 38.462 15.08 0.00 37.87 3.66
2049 2102 2.743636 TTGTAAGAGGCCTCTGTTCG 57.256 50.000 35.77 0.00 40.36 3.95
2107 2160 2.868839 GCAATGCAGCAATCTGGTGTTT 60.869 45.455 0.00 0.39 46.67 2.83
2229 2282 0.539438 TTGAGCCCAATGTGGTGACC 60.539 55.000 0.00 0.00 35.17 4.02
2258 2311 4.722220 TCCTTGATAGATGGGCATTCAAG 58.278 43.478 0.00 0.00 41.74 3.02
2445 2498 3.130633 TCCAAATTCAGTCACAGTGTCG 58.869 45.455 0.00 0.00 0.00 4.35
2718 2771 6.202516 AGCTTCACTTACTCACTACTGATC 57.797 41.667 0.00 0.00 0.00 2.92
2781 2834 7.452562 TGATGCTCTATGCTGATATGGTTAAA 58.547 34.615 0.00 0.00 43.37 1.52
2833 2889 2.762327 GACATTTGGTCAAGGGATGCAT 59.238 45.455 0.00 0.00 46.19 3.96
2901 2957 5.729510 ACTAGAATCAAGGCTTGAGAGAAC 58.270 41.667 31.17 19.88 43.98 3.01
3034 3091 4.437390 GCCCTTCACATATGAGTTTCAACG 60.437 45.833 10.38 0.00 35.83 4.10
3038 3095 6.147821 CCTTCACATATGAGTTTCAACGAAGT 59.852 38.462 10.38 0.00 38.44 3.01
3074 3133 3.515602 AATGAACCTGCTTCTCAAGGT 57.484 42.857 0.00 0.00 35.99 3.50
3093 3152 4.677182 AGGTAAATGAAGGTTCAGCCAAT 58.323 39.130 0.00 0.00 41.08 3.16
3209 3281 5.686159 AGCTGCACAAGATGATTATAAGC 57.314 39.130 1.02 0.00 0.00 3.09
3210 3282 5.374921 AGCTGCACAAGATGATTATAAGCT 58.625 37.500 1.02 0.00 32.66 3.74
3211 3283 5.826737 AGCTGCACAAGATGATTATAAGCTT 59.173 36.000 3.48 3.48 33.70 3.74
3212 3284 6.320672 AGCTGCACAAGATGATTATAAGCTTT 59.679 34.615 3.20 0.00 33.70 3.51
3213 3285 6.636044 GCTGCACAAGATGATTATAAGCTTTC 59.364 38.462 3.20 0.00 0.00 2.62
3214 3286 7.468357 GCTGCACAAGATGATTATAAGCTTTCT 60.468 37.037 3.20 0.00 0.00 2.52
3215 3287 7.923888 TGCACAAGATGATTATAAGCTTTCTC 58.076 34.615 3.20 0.00 0.00 2.87
3216 3288 7.553760 TGCACAAGATGATTATAAGCTTTCTCA 59.446 33.333 3.20 3.36 0.00 3.27
3217 3289 8.400947 GCACAAGATGATTATAAGCTTTCTCAA 58.599 33.333 3.20 0.00 0.00 3.02
3364 3436 0.528470 GTGTTCTGAGCTAGCCGAGT 59.472 55.000 12.13 0.00 0.00 4.18
3417 3489 5.241728 CAGTACATGCTGCACTAGGACTATA 59.758 44.000 13.87 0.00 0.00 1.31
3418 3490 5.833667 AGTACATGCTGCACTAGGACTATAA 59.166 40.000 3.57 0.00 0.00 0.98
3419 3491 5.815233 ACATGCTGCACTAGGACTATAAT 57.185 39.130 3.57 0.00 0.00 1.28
3420 3492 5.545588 ACATGCTGCACTAGGACTATAATG 58.454 41.667 3.57 0.00 0.00 1.90
3421 3493 4.607293 TGCTGCACTAGGACTATAATGG 57.393 45.455 0.00 0.00 0.00 3.16
3422 3494 4.223144 TGCTGCACTAGGACTATAATGGA 58.777 43.478 0.00 0.00 0.00 3.41
3423 3495 4.840680 TGCTGCACTAGGACTATAATGGAT 59.159 41.667 0.00 0.00 0.00 3.41
3424 3496 5.047021 TGCTGCACTAGGACTATAATGGATC 60.047 44.000 0.00 0.00 0.00 3.36
3425 3497 5.186797 GCTGCACTAGGACTATAATGGATCT 59.813 44.000 0.00 0.00 0.00 2.75
3426 3498 6.378564 GCTGCACTAGGACTATAATGGATCTA 59.621 42.308 0.00 0.00 0.00 1.98
3427 3499 7.416213 GCTGCACTAGGACTATAATGGATCTAG 60.416 44.444 0.00 0.00 0.00 2.43
3428 3500 6.378564 TGCACTAGGACTATAATGGATCTAGC 59.621 42.308 0.00 0.00 0.00 3.42
3429 3501 6.378564 GCACTAGGACTATAATGGATCTAGCA 59.621 42.308 0.00 0.00 0.00 3.49
3430 3502 7.629652 GCACTAGGACTATAATGGATCTAGCAC 60.630 44.444 0.00 0.00 0.00 4.40
3431 3503 5.906113 AGGACTATAATGGATCTAGCACG 57.094 43.478 0.00 0.00 0.00 5.34
3432 3504 4.158764 AGGACTATAATGGATCTAGCACGC 59.841 45.833 0.00 0.00 0.00 5.34
3433 3505 4.158764 GGACTATAATGGATCTAGCACGCT 59.841 45.833 0.00 0.00 0.00 5.07
3434 3506 5.357314 GGACTATAATGGATCTAGCACGCTA 59.643 44.000 0.00 0.00 0.00 4.26
3435 3507 6.127703 GGACTATAATGGATCTAGCACGCTAA 60.128 42.308 0.00 0.00 0.00 3.09
3436 3508 7.228314 ACTATAATGGATCTAGCACGCTAAA 57.772 36.000 0.00 0.00 0.00 1.85
3437 3509 7.091443 ACTATAATGGATCTAGCACGCTAAAC 58.909 38.462 0.00 0.00 0.00 2.01
3438 3510 2.596904 TGGATCTAGCACGCTAAACC 57.403 50.000 0.00 4.91 0.00 3.27
3439 3511 1.202371 TGGATCTAGCACGCTAAACCG 60.202 52.381 0.00 0.00 0.00 4.44
3440 3512 0.853419 GATCTAGCACGCTAAACCGC 59.147 55.000 0.00 0.00 0.00 5.68
3441 3513 0.460311 ATCTAGCACGCTAAACCGCT 59.540 50.000 0.00 0.00 38.51 5.52
3442 3514 0.245539 TCTAGCACGCTAAACCGCTT 59.754 50.000 0.00 0.00 35.93 4.68
3443 3515 0.645868 CTAGCACGCTAAACCGCTTC 59.354 55.000 0.00 0.00 35.93 3.86
3444 3516 0.245539 TAGCACGCTAAACCGCTTCT 59.754 50.000 0.00 0.00 35.93 2.85
3445 3517 1.132640 GCACGCTAAACCGCTTCTG 59.867 57.895 0.00 0.00 0.00 3.02
3446 3518 1.566018 GCACGCTAAACCGCTTCTGT 61.566 55.000 0.00 0.00 0.00 3.41
3447 3519 0.163788 CACGCTAAACCGCTTCTGTG 59.836 55.000 0.00 0.00 0.00 3.66
3448 3520 1.132640 CGCTAAACCGCTTCTGTGC 59.867 57.895 0.00 0.00 0.00 4.57
3449 3521 1.291877 CGCTAAACCGCTTCTGTGCT 61.292 55.000 0.00 0.00 0.00 4.40
3450 3522 0.166814 GCTAAACCGCTTCTGTGCTG 59.833 55.000 0.00 0.00 0.00 4.41
3451 3523 0.798776 CTAAACCGCTTCTGTGCTGG 59.201 55.000 0.00 0.00 34.52 4.85
3452 3524 0.605319 TAAACCGCTTCTGTGCTGGG 60.605 55.000 0.00 0.00 33.33 4.45
3453 3525 2.624674 AAACCGCTTCTGTGCTGGGT 62.625 55.000 0.00 0.00 33.33 4.51
3454 3526 2.281761 CCGCTTCTGTGCTGGGTT 60.282 61.111 0.00 0.00 0.00 4.11
3455 3527 2.620112 CCGCTTCTGTGCTGGGTTG 61.620 63.158 0.00 0.00 0.00 3.77
3456 3528 1.597854 CGCTTCTGTGCTGGGTTGA 60.598 57.895 0.00 0.00 0.00 3.18
3457 3529 0.957395 CGCTTCTGTGCTGGGTTGAT 60.957 55.000 0.00 0.00 0.00 2.57
3458 3530 1.675714 CGCTTCTGTGCTGGGTTGATA 60.676 52.381 0.00 0.00 0.00 2.15
3459 3531 2.648059 GCTTCTGTGCTGGGTTGATAT 58.352 47.619 0.00 0.00 0.00 1.63
3460 3532 3.741075 CGCTTCTGTGCTGGGTTGATATA 60.741 47.826 0.00 0.00 0.00 0.86
3461 3533 3.561725 GCTTCTGTGCTGGGTTGATATAC 59.438 47.826 0.00 0.00 0.00 1.47
3462 3534 4.769688 CTTCTGTGCTGGGTTGATATACA 58.230 43.478 0.00 0.00 0.00 2.29
3463 3535 4.835284 TCTGTGCTGGGTTGATATACAA 57.165 40.909 0.00 0.00 36.02 2.41
3464 3536 5.172687 TCTGTGCTGGGTTGATATACAAA 57.827 39.130 0.00 0.00 40.36 2.83
3465 3537 5.754782 TCTGTGCTGGGTTGATATACAAAT 58.245 37.500 0.00 0.00 40.36 2.32
3466 3538 6.186957 TCTGTGCTGGGTTGATATACAAATT 58.813 36.000 0.00 0.00 40.36 1.82
3467 3539 6.095300 TCTGTGCTGGGTTGATATACAAATTG 59.905 38.462 0.00 0.00 40.36 2.32
3468 3540 5.043248 GTGCTGGGTTGATATACAAATTGC 58.957 41.667 0.00 0.00 40.36 3.56
3469 3541 4.955450 TGCTGGGTTGATATACAAATTGCT 59.045 37.500 0.00 0.00 40.36 3.91
3470 3542 5.421693 TGCTGGGTTGATATACAAATTGCTT 59.578 36.000 0.00 0.00 40.36 3.91
3471 3543 5.750067 GCTGGGTTGATATACAAATTGCTTG 59.250 40.000 0.00 0.00 40.36 4.01
3481 3553 3.709987 ACAAATTGCTTGTGTTCTGAGC 58.290 40.909 0.00 0.00 46.80 4.26
3482 3554 3.382546 ACAAATTGCTTGTGTTCTGAGCT 59.617 39.130 0.00 0.00 46.80 4.09
3483 3555 4.580167 ACAAATTGCTTGTGTTCTGAGCTA 59.420 37.500 0.00 0.00 46.80 3.32
3484 3556 5.152097 CAAATTGCTTGTGTTCTGAGCTAG 58.848 41.667 0.00 0.00 37.32 3.42
3485 3557 1.800805 TGCTTGTGTTCTGAGCTAGC 58.199 50.000 6.62 6.62 37.32 3.42
3486 3558 1.082690 GCTTGTGTTCTGAGCTAGCC 58.917 55.000 12.13 3.49 33.72 3.93
3487 3559 1.354040 CTTGTGTTCTGAGCTAGCCG 58.646 55.000 12.13 0.00 0.00 5.52
3488 3560 0.966179 TTGTGTTCTGAGCTAGCCGA 59.034 50.000 12.13 2.75 0.00 5.54
3489 3561 0.528017 TGTGTTCTGAGCTAGCCGAG 59.472 55.000 12.13 7.72 0.00 4.63
3500 3572 1.681538 CTAGCCGAGCTTGGAGTAGA 58.318 55.000 25.25 2.04 40.44 2.59
3501 3573 1.606668 CTAGCCGAGCTTGGAGTAGAG 59.393 57.143 25.25 8.25 40.44 2.43
3502 3574 0.033991 AGCCGAGCTTGGAGTAGAGA 60.034 55.000 25.25 0.00 33.89 3.10
3503 3575 0.101579 GCCGAGCTTGGAGTAGAGAC 59.898 60.000 25.25 0.00 0.00 3.36
3504 3576 0.378962 CCGAGCTTGGAGTAGAGACG 59.621 60.000 15.76 0.00 0.00 4.18
3505 3577 0.378962 CGAGCTTGGAGTAGAGACGG 59.621 60.000 0.00 0.00 0.00 4.79
3506 3578 1.752683 GAGCTTGGAGTAGAGACGGA 58.247 55.000 0.00 0.00 0.00 4.69
3507 3579 1.673920 GAGCTTGGAGTAGAGACGGAG 59.326 57.143 0.00 0.00 0.00 4.63
3508 3580 1.282447 AGCTTGGAGTAGAGACGGAGA 59.718 52.381 0.00 0.00 0.00 3.71
3509 3581 2.092103 AGCTTGGAGTAGAGACGGAGAT 60.092 50.000 0.00 0.00 0.00 2.75
3510 3582 2.034053 GCTTGGAGTAGAGACGGAGATG 59.966 54.545 0.00 0.00 0.00 2.90
3511 3583 1.681538 TGGAGTAGAGACGGAGATGC 58.318 55.000 0.00 0.00 0.00 3.91
3512 3584 1.064685 TGGAGTAGAGACGGAGATGCA 60.065 52.381 0.00 0.00 0.00 3.96
3513 3585 2.025155 GGAGTAGAGACGGAGATGCAA 58.975 52.381 0.00 0.00 0.00 4.08
3514 3586 2.034053 GGAGTAGAGACGGAGATGCAAG 59.966 54.545 0.00 0.00 0.00 4.01
3515 3587 2.685897 GAGTAGAGACGGAGATGCAAGT 59.314 50.000 0.00 0.00 0.00 3.16
3516 3588 2.425312 AGTAGAGACGGAGATGCAAGTG 59.575 50.000 0.00 0.00 0.00 3.16
3517 3589 1.261480 AGAGACGGAGATGCAAGTGT 58.739 50.000 0.00 0.00 0.00 3.55
3518 3590 1.067283 AGAGACGGAGATGCAAGTGTG 60.067 52.381 0.00 0.00 0.00 3.82
3686 3758 7.807977 ATTAATGAAGTTATGTAGTGCCTGG 57.192 36.000 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 30 6.319911 TCATCCTGTCCTCAATCGCTATATAG 59.680 42.308 5.30 5.30 0.00 1.31
34 36 1.137872 GTCATCCTGTCCTCAATCGCT 59.862 52.381 0.00 0.00 0.00 4.93
39 41 2.705658 ACAGTTGTCATCCTGTCCTCAA 59.294 45.455 0.93 0.00 37.34 3.02
44 46 4.686554 GTCTAACACAGTTGTCATCCTGTC 59.313 45.833 3.36 0.00 39.83 3.51
45 47 4.345257 AGTCTAACACAGTTGTCATCCTGT 59.655 41.667 0.93 0.93 42.47 4.00
66 68 6.966534 ATGATTTTGACTGAAAAGACCAGT 57.033 33.333 0.00 0.00 46.51 4.00
67 69 7.205297 ACAATGATTTTGACTGAAAAGACCAG 58.795 34.615 0.00 0.00 36.97 4.00
126 128 8.498575 TCATCCTAACCATTCAACCACATATTA 58.501 33.333 0.00 0.00 0.00 0.98
130 132 4.949856 GTCATCCTAACCATTCAACCACAT 59.050 41.667 0.00 0.00 0.00 3.21
132 134 4.331968 TGTCATCCTAACCATTCAACCAC 58.668 43.478 0.00 0.00 0.00 4.16
135 137 6.407202 ACTACTGTCATCCTAACCATTCAAC 58.593 40.000 0.00 0.00 0.00 3.18
139 141 6.550108 ACGATACTACTGTCATCCTAACCATT 59.450 38.462 0.00 0.00 0.00 3.16
146 148 3.566322 GCTGACGATACTACTGTCATCCT 59.434 47.826 0.00 0.00 41.39 3.24
150 152 3.000684 AGGCTGACGATACTACTGTCA 57.999 47.619 0.00 0.00 40.12 3.58
151 153 3.250521 GGTAGGCTGACGATACTACTGTC 59.749 52.174 0.00 0.00 36.81 3.51
157 159 1.022735 CGTGGTAGGCTGACGATACT 58.977 55.000 9.20 0.00 35.05 2.12
163 165 2.271800 CTTGAATCGTGGTAGGCTGAC 58.728 52.381 0.00 0.00 0.00 3.51
168 170 2.386661 AGCACTTGAATCGTGGTAGG 57.613 50.000 0.00 0.00 40.88 3.18
170 172 3.762288 AGTCTAGCACTTGAATCGTGGTA 59.238 43.478 0.00 0.00 42.44 3.25
172 174 3.238108 AGTCTAGCACTTGAATCGTGG 57.762 47.619 0.00 0.00 33.10 4.94
204 216 7.330208 CCTGGAACAAATTAAGAGAAATGCAAG 59.670 37.037 0.00 0.00 38.70 4.01
206 218 6.690530 CCTGGAACAAATTAAGAGAAATGCA 58.309 36.000 0.00 0.00 38.70 3.96
213 225 4.158579 GGAAGGCCTGGAACAAATTAAGAG 59.841 45.833 5.69 0.00 38.70 2.85
214 226 4.086457 GGAAGGCCTGGAACAAATTAAGA 58.914 43.478 5.69 0.00 38.70 2.10
217 229 2.442413 CGGAAGGCCTGGAACAAATTA 58.558 47.619 5.69 0.00 38.70 1.40
218 230 1.256812 CGGAAGGCCTGGAACAAATT 58.743 50.000 5.69 0.00 38.70 1.82
241 253 2.034179 TCTTCTCTCACTGAACGCGAAA 59.966 45.455 15.93 0.00 0.00 3.46
245 257 2.715737 AGTCTTCTCTCACTGAACGC 57.284 50.000 0.00 0.00 0.00 4.84
246 258 4.147306 CGAAAAGTCTTCTCTCACTGAACG 59.853 45.833 0.00 0.00 0.00 3.95
252 264 2.981140 CGACCGAAAAGTCTTCTCTCAC 59.019 50.000 0.00 0.00 34.46 3.51
256 268 3.285816 AGACGACCGAAAAGTCTTCTC 57.714 47.619 0.00 0.00 40.29 2.87
259 271 3.996150 TGTAGACGACCGAAAAGTCTT 57.004 42.857 2.60 0.00 41.93 3.01
263 275 4.626321 GTCTTTGTAGACGACCGAAAAG 57.374 45.455 0.00 0.00 41.28 2.27
317 329 4.651503 ACACCCTCGAGATTGAGATAACAT 59.348 41.667 15.71 0.00 38.28 2.71
319 331 4.657436 ACACCCTCGAGATTGAGATAAC 57.343 45.455 15.71 0.00 38.28 1.89
320 332 5.677319 AAACACCCTCGAGATTGAGATAA 57.323 39.130 15.71 0.00 38.28 1.75
321 333 6.978674 ATAAACACCCTCGAGATTGAGATA 57.021 37.500 15.71 6.87 38.28 1.98
323 335 5.302059 CCTATAAACACCCTCGAGATTGAGA 59.698 44.000 15.71 2.10 38.28 3.27
333 345 3.522343 ACCTTGTCCCTATAAACACCCTC 59.478 47.826 0.00 0.00 0.00 4.30
334 346 3.538387 ACCTTGTCCCTATAAACACCCT 58.462 45.455 0.00 0.00 0.00 4.34
335 347 5.374071 CATACCTTGTCCCTATAAACACCC 58.626 45.833 0.00 0.00 0.00 4.61
336 348 4.820173 GCATACCTTGTCCCTATAAACACC 59.180 45.833 0.00 0.00 0.00 4.16
340 354 6.042322 ACATACGCATACCTTGTCCCTATAAA 59.958 38.462 0.00 0.00 0.00 1.40
342 356 5.047590 CACATACGCATACCTTGTCCCTATA 60.048 44.000 0.00 0.00 0.00 1.31
350 364 3.682377 TGAACACACATACGCATACCTTG 59.318 43.478 0.00 0.00 0.00 3.61
352 366 3.603158 TGAACACACATACGCATACCT 57.397 42.857 0.00 0.00 0.00 3.08
359 373 3.118920 TCACCCCTATGAACACACATACG 60.119 47.826 0.00 0.00 0.00 3.06
377 391 2.157668 CGCAAACACTCATACACTCACC 59.842 50.000 0.00 0.00 0.00 4.02
379 393 2.799978 CACGCAAACACTCATACACTCA 59.200 45.455 0.00 0.00 0.00 3.41
380 394 2.800544 ACACGCAAACACTCATACACTC 59.199 45.455 0.00 0.00 0.00 3.51
388 414 3.672310 TCGTTTTAACACGCAAACACTC 58.328 40.909 9.26 0.00 40.14 3.51
394 420 8.951954 AACATAATTATCGTTTTAACACGCAA 57.048 26.923 9.26 6.42 40.14 4.85
397 423 9.763465 AGGAAACATAATTATCGTTTTAACACG 57.237 29.630 18.60 7.83 41.78 4.49
408 434 5.707764 GGGAGGCAGAGGAAACATAATTATC 59.292 44.000 0.00 0.00 0.00 1.75
410 436 4.444306 CGGGAGGCAGAGGAAACATAATTA 60.444 45.833 0.00 0.00 0.00 1.40
411 437 3.685550 CGGGAGGCAGAGGAAACATAATT 60.686 47.826 0.00 0.00 0.00 1.40
413 439 1.209504 CGGGAGGCAGAGGAAACATAA 59.790 52.381 0.00 0.00 0.00 1.90
415 441 1.604378 CGGGAGGCAGAGGAAACAT 59.396 57.895 0.00 0.00 0.00 2.71
416 442 3.068881 CGGGAGGCAGAGGAAACA 58.931 61.111 0.00 0.00 0.00 2.83
417 443 2.436824 GCGGGAGGCAGAGGAAAC 60.437 66.667 0.00 0.00 42.87 2.78
441 467 1.279238 GACGAGATAGACCGGCGAC 59.721 63.158 9.30 1.53 0.00 5.19
442 468 1.890979 GGACGAGATAGACCGGCGA 60.891 63.158 9.30 0.00 33.98 5.54
443 469 2.638154 GGACGAGATAGACCGGCG 59.362 66.667 0.00 0.00 33.98 6.46
444 470 2.562876 GGGGACGAGATAGACCGGC 61.563 68.421 0.00 0.00 0.00 6.13
445 471 1.152819 TGGGGACGAGATAGACCGG 60.153 63.158 0.00 0.00 0.00 5.28
446 472 0.465824 ACTGGGGACGAGATAGACCG 60.466 60.000 0.00 0.00 0.00 4.79
447 473 1.409427 CAACTGGGGACGAGATAGACC 59.591 57.143 0.00 0.00 0.00 3.85
448 474 1.202428 GCAACTGGGGACGAGATAGAC 60.202 57.143 0.00 0.00 0.00 2.59
449 475 1.112113 GCAACTGGGGACGAGATAGA 58.888 55.000 0.00 0.00 0.00 1.98
450 476 0.105039 GGCAACTGGGGACGAGATAG 59.895 60.000 0.00 0.00 0.00 2.08
451 477 2.208527 GGCAACTGGGGACGAGATA 58.791 57.895 0.00 0.00 0.00 1.98
452 478 2.990479 GGCAACTGGGGACGAGAT 59.010 61.111 0.00 0.00 0.00 2.75
488 514 2.440247 CAAGGGCCGGGATTCACC 60.440 66.667 2.18 0.00 38.08 4.02
489 515 3.140814 GCAAGGGCCGGGATTCAC 61.141 66.667 2.18 0.00 0.00 3.18
508 534 3.569200 AAAACAGAGCCCTCCCGCC 62.569 63.158 0.00 0.00 0.00 6.13
509 535 2.034221 AAAACAGAGCCCTCCCGC 59.966 61.111 0.00 0.00 0.00 6.13
510 536 0.250727 TTGAAAACAGAGCCCTCCCG 60.251 55.000 0.00 0.00 0.00 5.14
511 537 1.995376 TTTGAAAACAGAGCCCTCCC 58.005 50.000 0.00 0.00 0.00 4.30
512 538 2.893489 ACATTTGAAAACAGAGCCCTCC 59.107 45.455 0.00 0.00 0.00 4.30
513 539 4.590850 AACATTTGAAAACAGAGCCCTC 57.409 40.909 0.00 0.00 0.00 4.30
514 540 6.670695 ATAAACATTTGAAAACAGAGCCCT 57.329 33.333 0.00 0.00 0.00 5.19
515 541 6.928492 TGAATAAACATTTGAAAACAGAGCCC 59.072 34.615 0.00 0.00 0.00 5.19
516 542 7.945033 TGAATAAACATTTGAAAACAGAGCC 57.055 32.000 0.00 0.00 0.00 4.70
517 543 9.034544 ACTTGAATAAACATTTGAAAACAGAGC 57.965 29.630 0.00 0.00 0.00 4.09
530 556 9.758651 GAACCCTAACAAAACTTGAATAAACAT 57.241 29.630 0.00 0.00 0.00 2.71
531 557 8.750298 TGAACCCTAACAAAACTTGAATAAACA 58.250 29.630 0.00 0.00 0.00 2.83
532 558 9.758651 ATGAACCCTAACAAAACTTGAATAAAC 57.241 29.630 0.00 0.00 0.00 2.01
533 559 9.757227 CATGAACCCTAACAAAACTTGAATAAA 57.243 29.630 0.00 0.00 0.00 1.40
534 560 8.919145 ACATGAACCCTAACAAAACTTGAATAA 58.081 29.630 0.00 0.00 0.00 1.40
535 561 8.472007 ACATGAACCCTAACAAAACTTGAATA 57.528 30.769 0.00 0.00 0.00 1.75
536 562 7.360113 ACATGAACCCTAACAAAACTTGAAT 57.640 32.000 0.00 0.00 0.00 2.57
537 563 6.183360 GGACATGAACCCTAACAAAACTTGAA 60.183 38.462 0.00 0.00 0.00 2.69
538 564 5.300792 GGACATGAACCCTAACAAAACTTGA 59.699 40.000 0.00 0.00 0.00 3.02
539 565 5.301805 AGGACATGAACCCTAACAAAACTTG 59.698 40.000 0.00 0.00 0.00 3.16
540 566 5.454966 AGGACATGAACCCTAACAAAACTT 58.545 37.500 0.00 0.00 0.00 2.66
541 567 5.061721 AGGACATGAACCCTAACAAAACT 57.938 39.130 0.00 0.00 0.00 2.66
542 568 7.175990 TGAATAGGACATGAACCCTAACAAAAC 59.824 37.037 14.02 6.39 38.42 2.43
543 569 7.235079 TGAATAGGACATGAACCCTAACAAAA 58.765 34.615 14.02 0.00 38.42 2.44
544 570 6.785076 TGAATAGGACATGAACCCTAACAAA 58.215 36.000 14.02 0.00 38.42 2.83
545 571 6.214615 TCTGAATAGGACATGAACCCTAACAA 59.785 38.462 14.02 5.49 38.42 2.83
546 572 5.724370 TCTGAATAGGACATGAACCCTAACA 59.276 40.000 14.02 14.56 38.42 2.41
547 573 6.235231 TCTGAATAGGACATGAACCCTAAC 57.765 41.667 14.02 12.06 38.42 2.34
548 574 6.884472 TTCTGAATAGGACATGAACCCTAA 57.116 37.500 14.02 2.19 38.42 2.69
549 575 6.672218 TCTTTCTGAATAGGACATGAACCCTA 59.328 38.462 0.00 7.68 39.18 3.53
550 576 5.488919 TCTTTCTGAATAGGACATGAACCCT 59.511 40.000 0.00 5.51 36.60 4.34
551 577 5.586643 GTCTTTCTGAATAGGACATGAACCC 59.413 44.000 0.00 0.00 0.00 4.11
552 578 5.292101 CGTCTTTCTGAATAGGACATGAACC 59.708 44.000 0.00 2.33 0.00 3.62
553 579 6.100004 TCGTCTTTCTGAATAGGACATGAAC 58.900 40.000 0.00 0.00 0.00 3.18
554 580 6.152831 TCTCGTCTTTCTGAATAGGACATGAA 59.847 38.462 0.00 0.00 0.00 2.57
555 581 5.652452 TCTCGTCTTTCTGAATAGGACATGA 59.348 40.000 0.00 10.24 0.00 3.07
556 582 5.746245 GTCTCGTCTTTCTGAATAGGACATG 59.254 44.000 14.34 0.00 0.00 3.21
557 583 5.449314 CGTCTCGTCTTTCTGAATAGGACAT 60.449 44.000 14.34 0.00 0.00 3.06
558 584 4.142665 CGTCTCGTCTTTCTGAATAGGACA 60.143 45.833 14.34 0.00 0.00 4.02
559 585 4.094590 TCGTCTCGTCTTTCTGAATAGGAC 59.905 45.833 0.00 0.46 0.00 3.85
560 586 4.094590 GTCGTCTCGTCTTTCTGAATAGGA 59.905 45.833 0.00 0.00 0.00 2.94
561 587 4.344448 GTCGTCTCGTCTTTCTGAATAGG 58.656 47.826 0.00 0.00 0.00 2.57
562 588 4.023128 CGTCGTCTCGTCTTTCTGAATAG 58.977 47.826 0.00 0.00 0.00 1.73
563 589 3.181513 CCGTCGTCTCGTCTTTCTGAATA 60.182 47.826 0.00 0.00 0.00 1.75
564 590 2.414293 CCGTCGTCTCGTCTTTCTGAAT 60.414 50.000 0.00 0.00 0.00 2.57
565 591 1.069432 CCGTCGTCTCGTCTTTCTGAA 60.069 52.381 0.00 0.00 0.00 3.02
566 592 0.516001 CCGTCGTCTCGTCTTTCTGA 59.484 55.000 0.00 0.00 0.00 3.27
567 593 0.516001 TCCGTCGTCTCGTCTTTCTG 59.484 55.000 0.00 0.00 0.00 3.02
568 594 0.797542 CTCCGTCGTCTCGTCTTTCT 59.202 55.000 0.00 0.00 0.00 2.52
569 595 0.179194 CCTCCGTCGTCTCGTCTTTC 60.179 60.000 0.00 0.00 0.00 2.62
570 596 1.874562 CCTCCGTCGTCTCGTCTTT 59.125 57.895 0.00 0.00 0.00 2.52
571 597 2.688794 GCCTCCGTCGTCTCGTCTT 61.689 63.158 0.00 0.00 0.00 3.01
572 598 3.126225 GCCTCCGTCGTCTCGTCT 61.126 66.667 0.00 0.00 0.00 4.18
573 599 3.098377 GAGCCTCCGTCGTCTCGTC 62.098 68.421 0.00 0.00 0.00 4.20
574 600 3.126225 GAGCCTCCGTCGTCTCGT 61.126 66.667 0.00 0.00 0.00 4.18
575 601 3.878519 GGAGCCTCCGTCGTCTCG 61.879 72.222 0.00 0.00 0.00 4.04
576 602 0.747283 TAAGGAGCCTCCGTCGTCTC 60.747 60.000 1.28 0.00 42.75 3.36
577 603 0.323178 TTAAGGAGCCTCCGTCGTCT 60.323 55.000 1.28 0.00 42.75 4.18
578 604 0.529378 TTTAAGGAGCCTCCGTCGTC 59.471 55.000 1.28 0.00 42.75 4.20
579 605 0.531200 CTTTAAGGAGCCTCCGTCGT 59.469 55.000 1.28 0.00 42.75 4.34
580 606 0.815734 TCTTTAAGGAGCCTCCGTCG 59.184 55.000 1.28 0.00 42.75 5.12
581 607 2.224090 GGATCTTTAAGGAGCCTCCGTC 60.224 54.545 14.18 0.00 42.75 4.79
582 608 1.763545 GGATCTTTAAGGAGCCTCCGT 59.236 52.381 14.18 4.48 42.75 4.69
583 609 1.070914 GGGATCTTTAAGGAGCCTCCG 59.929 57.143 19.84 0.00 42.75 4.63
584 610 1.070914 CGGGATCTTTAAGGAGCCTCC 59.929 57.143 19.84 1.26 41.12 4.30
585 611 2.040178 TCGGGATCTTTAAGGAGCCTC 58.960 52.381 19.84 10.22 41.12 4.70
586 612 2.176247 TCGGGATCTTTAAGGAGCCT 57.824 50.000 19.84 0.00 41.12 4.58
587 613 2.368875 TCATCGGGATCTTTAAGGAGCC 59.631 50.000 13.17 13.17 40.68 4.70
588 614 3.753294 TCATCGGGATCTTTAAGGAGC 57.247 47.619 0.00 0.00 0.00 4.70
589 615 4.993584 CACATCATCGGGATCTTTAAGGAG 59.006 45.833 0.00 0.00 32.57 3.69
590 616 4.408921 ACACATCATCGGGATCTTTAAGGA 59.591 41.667 0.00 0.00 32.57 3.36
591 617 4.708177 ACACATCATCGGGATCTTTAAGG 58.292 43.478 0.00 0.00 32.57 2.69
592 618 5.605534 AGACACATCATCGGGATCTTTAAG 58.394 41.667 0.00 0.00 32.57 1.85
593 619 5.614324 AGACACATCATCGGGATCTTTAA 57.386 39.130 0.00 0.00 32.57 1.52
594 620 5.279006 GCTAGACACATCATCGGGATCTTTA 60.279 44.000 0.00 0.00 32.57 1.85
595 621 4.502259 GCTAGACACATCATCGGGATCTTT 60.502 45.833 0.00 0.00 32.57 2.52
596 622 3.006323 GCTAGACACATCATCGGGATCTT 59.994 47.826 0.00 0.00 32.57 2.40
597 623 2.560542 GCTAGACACATCATCGGGATCT 59.439 50.000 0.00 0.00 32.57 2.75
598 624 2.297315 TGCTAGACACATCATCGGGATC 59.703 50.000 0.00 0.00 32.57 3.36
599 625 2.319844 TGCTAGACACATCATCGGGAT 58.680 47.619 0.00 0.00 36.39 3.85
600 626 1.775385 TGCTAGACACATCATCGGGA 58.225 50.000 0.00 0.00 0.00 5.14
601 627 2.827800 ATGCTAGACACATCATCGGG 57.172 50.000 0.00 0.00 0.00 5.14
602 628 5.121298 CCAATAATGCTAGACACATCATCGG 59.879 44.000 0.00 0.00 0.00 4.18
603 629 5.121298 CCCAATAATGCTAGACACATCATCG 59.879 44.000 0.00 0.00 0.00 3.84
604 630 6.233434 TCCCAATAATGCTAGACACATCATC 58.767 40.000 0.00 0.00 0.00 2.92
605 631 6.191657 TCCCAATAATGCTAGACACATCAT 57.808 37.500 0.00 0.00 0.00 2.45
606 632 5.455183 CCTCCCAATAATGCTAGACACATCA 60.455 44.000 0.00 0.00 0.00 3.07
607 633 4.999950 CCTCCCAATAATGCTAGACACATC 59.000 45.833 0.00 0.00 0.00 3.06
608 634 4.747931 GCCTCCCAATAATGCTAGACACAT 60.748 45.833 0.00 0.00 0.00 3.21
609 635 3.433598 GCCTCCCAATAATGCTAGACACA 60.434 47.826 0.00 0.00 0.00 3.72
610 636 3.142174 GCCTCCCAATAATGCTAGACAC 58.858 50.000 0.00 0.00 0.00 3.67
611 637 2.224281 CGCCTCCCAATAATGCTAGACA 60.224 50.000 0.00 0.00 0.00 3.41
612 638 2.224305 ACGCCTCCCAATAATGCTAGAC 60.224 50.000 0.00 0.00 0.00 2.59
613 639 2.047061 ACGCCTCCCAATAATGCTAGA 58.953 47.619 0.00 0.00 0.00 2.43
614 640 2.146342 CACGCCTCCCAATAATGCTAG 58.854 52.381 0.00 0.00 0.00 3.42
615 641 1.488812 ACACGCCTCCCAATAATGCTA 59.511 47.619 0.00 0.00 0.00 3.49
616 642 0.255890 ACACGCCTCCCAATAATGCT 59.744 50.000 0.00 0.00 0.00 3.79
617 643 0.381801 CACACGCCTCCCAATAATGC 59.618 55.000 0.00 0.00 0.00 3.56
618 644 2.036958 TCACACGCCTCCCAATAATG 57.963 50.000 0.00 0.00 0.00 1.90
619 645 2.238646 TCTTCACACGCCTCCCAATAAT 59.761 45.455 0.00 0.00 0.00 1.28
620 646 1.626321 TCTTCACACGCCTCCCAATAA 59.374 47.619 0.00 0.00 0.00 1.40
621 647 1.271856 TCTTCACACGCCTCCCAATA 58.728 50.000 0.00 0.00 0.00 1.90
622 648 0.620556 ATCTTCACACGCCTCCCAAT 59.379 50.000 0.00 0.00 0.00 3.16
623 649 0.321564 CATCTTCACACGCCTCCCAA 60.322 55.000 0.00 0.00 0.00 4.12
624 650 1.296392 CATCTTCACACGCCTCCCA 59.704 57.895 0.00 0.00 0.00 4.37
625 651 0.741221 GACATCTTCACACGCCTCCC 60.741 60.000 0.00 0.00 0.00 4.30
626 652 0.741221 GGACATCTTCACACGCCTCC 60.741 60.000 0.00 0.00 0.00 4.30
627 653 0.247736 AGGACATCTTCACACGCCTC 59.752 55.000 0.00 0.00 0.00 4.70
628 654 0.687354 AAGGACATCTTCACACGCCT 59.313 50.000 0.00 0.00 0.00 5.52
629 655 2.380084 TAAGGACATCTTCACACGCC 57.620 50.000 0.00 0.00 36.93 5.68
630 656 5.348986 TCTATTAAGGACATCTTCACACGC 58.651 41.667 0.00 0.00 36.93 5.34
631 657 8.331022 CAAATCTATTAAGGACATCTTCACACG 58.669 37.037 0.00 0.00 36.93 4.49
632 658 8.125448 GCAAATCTATTAAGGACATCTTCACAC 58.875 37.037 0.00 0.00 36.93 3.82
633 659 8.049117 AGCAAATCTATTAAGGACATCTTCACA 58.951 33.333 0.00 0.00 36.93 3.58
634 660 8.443953 AGCAAATCTATTAAGGACATCTTCAC 57.556 34.615 0.00 0.00 36.93 3.18
635 661 7.439356 CGAGCAAATCTATTAAGGACATCTTCA 59.561 37.037 0.00 0.00 36.93 3.02
636 662 7.095439 CCGAGCAAATCTATTAAGGACATCTTC 60.095 40.741 0.00 0.00 36.93 2.87
637 663 6.708054 CCGAGCAAATCTATTAAGGACATCTT 59.292 38.462 0.00 0.00 39.40 2.40
638 664 6.042093 TCCGAGCAAATCTATTAAGGACATCT 59.958 38.462 0.00 0.00 0.00 2.90
639 665 6.223852 TCCGAGCAAATCTATTAAGGACATC 58.776 40.000 0.00 0.00 0.00 3.06
640 666 6.174720 TCCGAGCAAATCTATTAAGGACAT 57.825 37.500 0.00 0.00 0.00 3.06
641 667 5.607939 TCCGAGCAAATCTATTAAGGACA 57.392 39.130 0.00 0.00 0.00 4.02
642 668 6.367422 CAGATCCGAGCAAATCTATTAAGGAC 59.633 42.308 0.00 0.00 31.10 3.85
643 669 6.267699 TCAGATCCGAGCAAATCTATTAAGGA 59.732 38.462 0.00 0.00 31.10 3.36
644 670 6.367422 GTCAGATCCGAGCAAATCTATTAAGG 59.633 42.308 0.00 0.00 31.10 2.69
645 671 6.367422 GGTCAGATCCGAGCAAATCTATTAAG 59.633 42.308 3.24 0.00 33.55 1.85
646 672 6.223852 GGTCAGATCCGAGCAAATCTATTAA 58.776 40.000 3.24 0.00 33.55 1.40
647 673 5.784177 GGTCAGATCCGAGCAAATCTATTA 58.216 41.667 3.24 0.00 33.55 0.98
648 674 4.636249 GGTCAGATCCGAGCAAATCTATT 58.364 43.478 3.24 0.00 33.55 1.73
649 675 4.264460 GGTCAGATCCGAGCAAATCTAT 57.736 45.455 3.24 0.00 33.55 1.98
650 676 3.735237 GGTCAGATCCGAGCAAATCTA 57.265 47.619 3.24 0.00 33.55 1.98
651 677 2.611225 GGTCAGATCCGAGCAAATCT 57.389 50.000 3.24 0.00 33.55 2.40
661 687 4.579340 TGTAGATGAAGTACGGTCAGATCC 59.421 45.833 8.08 0.00 0.00 3.36
662 688 5.752892 TGTAGATGAAGTACGGTCAGATC 57.247 43.478 8.08 2.91 0.00 2.75
663 689 6.513556 CGAATGTAGATGAAGTACGGTCAGAT 60.514 42.308 8.08 2.81 0.00 2.90
664 690 5.220796 CGAATGTAGATGAAGTACGGTCAGA 60.221 44.000 8.08 0.00 0.00 3.27
665 691 4.970611 CGAATGTAGATGAAGTACGGTCAG 59.029 45.833 8.08 0.00 0.00 3.51
666 692 4.397103 ACGAATGTAGATGAAGTACGGTCA 59.603 41.667 4.97 4.97 0.00 4.02
667 693 4.733887 CACGAATGTAGATGAAGTACGGTC 59.266 45.833 0.00 0.00 0.00 4.79
668 694 4.157289 ACACGAATGTAGATGAAGTACGGT 59.843 41.667 0.00 0.00 37.26 4.83
669 695 4.499399 CACACGAATGTAGATGAAGTACGG 59.501 45.833 0.00 0.00 36.72 4.02
670 696 5.093457 ACACACGAATGTAGATGAAGTACG 58.907 41.667 0.00 0.00 36.72 3.67
671 697 6.946229 AACACACGAATGTAGATGAAGTAC 57.054 37.500 0.00 0.00 36.72 2.73
672 698 7.654116 TGAAAACACACGAATGTAGATGAAGTA 59.346 33.333 0.00 0.00 36.72 2.24
673 699 6.481976 TGAAAACACACGAATGTAGATGAAGT 59.518 34.615 0.00 0.00 36.72 3.01
674 700 6.887368 TGAAAACACACGAATGTAGATGAAG 58.113 36.000 0.00 0.00 36.72 3.02
675 701 6.852858 TGAAAACACACGAATGTAGATGAA 57.147 33.333 0.00 0.00 36.72 2.57
676 702 6.426633 ACATGAAAACACACGAATGTAGATGA 59.573 34.615 0.00 0.00 36.72 2.92
677 703 6.602179 ACATGAAAACACACGAATGTAGATG 58.398 36.000 0.00 0.00 36.72 2.90
678 704 6.801539 ACATGAAAACACACGAATGTAGAT 57.198 33.333 0.00 0.00 36.72 1.98
679 705 6.426327 CAACATGAAAACACACGAATGTAGA 58.574 36.000 0.00 0.00 36.72 2.59
680 706 5.624900 CCAACATGAAAACACACGAATGTAG 59.375 40.000 0.00 0.00 36.72 2.74
681 707 5.297029 TCCAACATGAAAACACACGAATGTA 59.703 36.000 0.00 0.00 36.72 2.29
682 708 4.097135 TCCAACATGAAAACACACGAATGT 59.903 37.500 0.00 0.00 40.80 2.71
683 709 4.605968 TCCAACATGAAAACACACGAATG 58.394 39.130 0.00 0.00 0.00 2.67
684 710 4.909696 TCCAACATGAAAACACACGAAT 57.090 36.364 0.00 0.00 0.00 3.34
685 711 4.261405 GGATCCAACATGAAAACACACGAA 60.261 41.667 6.95 0.00 0.00 3.85
686 712 3.252215 GGATCCAACATGAAAACACACGA 59.748 43.478 6.95 0.00 0.00 4.35
687 713 3.253188 AGGATCCAACATGAAAACACACG 59.747 43.478 15.82 0.00 0.00 4.49
688 714 4.853924 AGGATCCAACATGAAAACACAC 57.146 40.909 15.82 0.00 0.00 3.82
689 715 5.139727 AGAAGGATCCAACATGAAAACACA 58.860 37.500 15.82 0.00 0.00 3.72
690 716 5.712152 AGAAGGATCCAACATGAAAACAC 57.288 39.130 15.82 0.00 0.00 3.32
691 717 7.890127 AGATTAGAAGGATCCAACATGAAAACA 59.110 33.333 15.82 0.00 0.00 2.83
692 718 8.286191 AGATTAGAAGGATCCAACATGAAAAC 57.714 34.615 15.82 0.00 0.00 2.43
693 719 9.396022 GTAGATTAGAAGGATCCAACATGAAAA 57.604 33.333 15.82 0.00 0.00 2.29
694 720 7.710907 CGTAGATTAGAAGGATCCAACATGAAA 59.289 37.037 15.82 0.00 0.00 2.69
695 721 7.210174 CGTAGATTAGAAGGATCCAACATGAA 58.790 38.462 15.82 0.34 0.00 2.57
696 722 6.738731 GCGTAGATTAGAAGGATCCAACATGA 60.739 42.308 15.82 0.00 0.00 3.07
697 723 5.406780 GCGTAGATTAGAAGGATCCAACATG 59.593 44.000 15.82 0.00 0.00 3.21
698 724 5.305644 AGCGTAGATTAGAAGGATCCAACAT 59.694 40.000 15.82 0.00 0.00 2.71
699 725 4.649674 AGCGTAGATTAGAAGGATCCAACA 59.350 41.667 15.82 0.00 0.00 3.33
700 726 5.203060 AGCGTAGATTAGAAGGATCCAAC 57.797 43.478 15.82 7.32 0.00 3.77
701 727 6.069331 AGTAGCGTAGATTAGAAGGATCCAA 58.931 40.000 15.82 0.00 0.00 3.53
702 728 5.632118 AGTAGCGTAGATTAGAAGGATCCA 58.368 41.667 15.82 0.00 0.00 3.41
703 729 5.941647 AGAGTAGCGTAGATTAGAAGGATCC 59.058 44.000 2.48 2.48 0.00 3.36
704 730 7.173562 TGAAGAGTAGCGTAGATTAGAAGGATC 59.826 40.741 0.00 0.00 0.00 3.36
705 731 6.999272 TGAAGAGTAGCGTAGATTAGAAGGAT 59.001 38.462 0.00 0.00 0.00 3.24
706 732 6.354938 TGAAGAGTAGCGTAGATTAGAAGGA 58.645 40.000 0.00 0.00 0.00 3.36
707 733 6.621316 TGAAGAGTAGCGTAGATTAGAAGG 57.379 41.667 0.00 0.00 0.00 3.46
708 734 7.866729 TGATGAAGAGTAGCGTAGATTAGAAG 58.133 38.462 0.00 0.00 0.00 2.85
709 735 7.520776 GCTGATGAAGAGTAGCGTAGATTAGAA 60.521 40.741 0.00 0.00 0.00 2.10
710 736 6.072948 GCTGATGAAGAGTAGCGTAGATTAGA 60.073 42.308 0.00 0.00 0.00 2.10
711 737 6.083630 GCTGATGAAGAGTAGCGTAGATTAG 58.916 44.000 0.00 0.00 0.00 1.73
712 738 5.531287 TGCTGATGAAGAGTAGCGTAGATTA 59.469 40.000 0.00 0.00 38.96 1.75
713 739 4.339530 TGCTGATGAAGAGTAGCGTAGATT 59.660 41.667 0.00 0.00 38.96 2.40
714 740 3.885901 TGCTGATGAAGAGTAGCGTAGAT 59.114 43.478 0.00 0.00 38.96 1.98
715 741 3.065510 GTGCTGATGAAGAGTAGCGTAGA 59.934 47.826 0.00 0.00 38.96 2.59
716 742 3.066064 AGTGCTGATGAAGAGTAGCGTAG 59.934 47.826 0.00 0.00 38.96 3.51
717 743 3.017442 AGTGCTGATGAAGAGTAGCGTA 58.983 45.455 0.00 0.00 38.96 4.42
718 744 1.821753 AGTGCTGATGAAGAGTAGCGT 59.178 47.619 0.00 0.00 38.96 5.07
719 745 2.575694 AGTGCTGATGAAGAGTAGCG 57.424 50.000 0.00 0.00 38.96 4.26
720 746 4.647424 ACTAGTGCTGATGAAGAGTAGC 57.353 45.455 0.00 0.00 36.72 3.58
721 747 5.960113 ACAACTAGTGCTGATGAAGAGTAG 58.040 41.667 0.00 0.00 0.00 2.57
722 748 5.392057 CGACAACTAGTGCTGATGAAGAGTA 60.392 44.000 0.00 0.00 0.00 2.59
723 749 4.617067 CGACAACTAGTGCTGATGAAGAGT 60.617 45.833 0.00 0.00 0.00 3.24
724 750 3.856521 CGACAACTAGTGCTGATGAAGAG 59.143 47.826 0.00 0.00 0.00 2.85
725 751 3.255888 ACGACAACTAGTGCTGATGAAGA 59.744 43.478 0.00 0.00 0.00 2.87
726 752 3.579709 ACGACAACTAGTGCTGATGAAG 58.420 45.455 0.00 0.00 0.00 3.02
727 753 3.660501 ACGACAACTAGTGCTGATGAA 57.339 42.857 0.00 0.00 0.00 2.57
728 754 3.255888 AGAACGACAACTAGTGCTGATGA 59.744 43.478 0.00 0.00 0.00 2.92
729 755 3.579709 AGAACGACAACTAGTGCTGATG 58.420 45.455 0.00 0.00 0.00 3.07
730 756 3.944055 AGAACGACAACTAGTGCTGAT 57.056 42.857 0.00 0.00 0.00 2.90
731 757 3.819337 AGTAGAACGACAACTAGTGCTGA 59.181 43.478 0.00 0.00 0.00 4.26
732 758 4.162096 AGTAGAACGACAACTAGTGCTG 57.838 45.455 0.00 0.00 0.00 4.41
733 759 4.142945 CGTAGTAGAACGACAACTAGTGCT 60.143 45.833 0.00 0.00 45.68 4.40
734 760 4.087265 CGTAGTAGAACGACAACTAGTGC 58.913 47.826 0.00 0.00 45.68 4.40
735 761 4.087265 GCGTAGTAGAACGACAACTAGTG 58.913 47.826 0.00 0.00 45.68 2.74
736 762 4.333633 GCGTAGTAGAACGACAACTAGT 57.666 45.455 0.00 0.00 45.68 2.57
744 770 1.369091 GGACCGGCGTAGTAGAACGA 61.369 60.000 6.01 0.00 45.68 3.85
745 771 1.063166 GGACCGGCGTAGTAGAACG 59.937 63.158 6.01 0.00 45.58 3.95
746 772 1.668419 TAGGACCGGCGTAGTAGAAC 58.332 55.000 6.01 0.00 0.00 3.01
747 773 2.158769 TCATAGGACCGGCGTAGTAGAA 60.159 50.000 6.01 0.00 0.00 2.10
748 774 1.417517 TCATAGGACCGGCGTAGTAGA 59.582 52.381 6.01 0.00 0.00 2.59
749 775 1.805345 CTCATAGGACCGGCGTAGTAG 59.195 57.143 6.01 0.00 0.00 2.57
750 776 1.544093 CCTCATAGGACCGGCGTAGTA 60.544 57.143 6.01 0.00 37.67 1.82
751 777 0.822532 CCTCATAGGACCGGCGTAGT 60.823 60.000 6.01 0.00 37.67 2.73
752 778 1.957562 CCTCATAGGACCGGCGTAG 59.042 63.158 6.01 0.00 37.67 3.51
753 779 2.198287 GCCTCATAGGACCGGCGTA 61.198 63.158 6.01 0.49 37.67 4.42
754 780 3.537874 GCCTCATAGGACCGGCGT 61.538 66.667 6.01 0.00 37.67 5.68
755 781 4.301027 GGCCTCATAGGACCGGCG 62.301 72.222 0.00 0.00 37.46 6.46
760 786 0.833287 TGCAAGAGGCCTCATAGGAC 59.167 55.000 33.90 16.75 46.64 3.85
761 787 1.419012 CATGCAAGAGGCCTCATAGGA 59.581 52.381 33.90 23.07 43.89 2.94
762 788 1.893544 CATGCAAGAGGCCTCATAGG 58.106 55.000 33.90 19.89 43.89 2.57
763 789 1.202782 AGCATGCAAGAGGCCTCATAG 60.203 52.381 33.90 22.60 43.89 2.23
764 790 0.841961 AGCATGCAAGAGGCCTCATA 59.158 50.000 33.90 16.97 43.89 2.15
765 791 0.841961 TAGCATGCAAGAGGCCTCAT 59.158 50.000 33.90 21.09 43.89 2.90
766 792 0.179702 CTAGCATGCAAGAGGCCTCA 59.820 55.000 33.90 15.19 43.89 3.86
767 793 0.467384 TCTAGCATGCAAGAGGCCTC 59.533 55.000 26.22 26.22 43.89 4.70
768 794 0.179936 GTCTAGCATGCAAGAGGCCT 59.820 55.000 21.98 3.86 43.89 5.19
769 795 0.179936 AGTCTAGCATGCAAGAGGCC 59.820 55.000 21.98 0.00 43.89 5.19
770 796 2.869192 GTTAGTCTAGCATGCAAGAGGC 59.131 50.000 21.98 15.11 45.13 4.70
771 797 3.119291 CGTTAGTCTAGCATGCAAGAGG 58.881 50.000 21.98 4.82 0.00 3.69
772 798 3.119291 CCGTTAGTCTAGCATGCAAGAG 58.881 50.000 21.98 13.82 0.00 2.85
773 799 2.738643 GCCGTTAGTCTAGCATGCAAGA 60.739 50.000 21.98 3.44 0.00 3.02
774 800 1.594862 GCCGTTAGTCTAGCATGCAAG 59.405 52.381 21.98 0.00 0.00 4.01
775 801 1.066502 TGCCGTTAGTCTAGCATGCAA 60.067 47.619 21.98 0.36 0.00 4.08
824 850 0.958822 AAAAGCTCGATGCCGGTTTT 59.041 45.000 1.90 6.51 44.23 2.43
846 885 2.493035 TCAGCTCGATGCAGTTTTTCA 58.507 42.857 9.09 0.00 45.94 2.69
847 886 3.542712 TTCAGCTCGATGCAGTTTTTC 57.457 42.857 9.09 0.00 45.94 2.29
863 902 1.948145 GCAGATTCAGGCCAGATTCAG 59.052 52.381 18.74 13.30 0.00 3.02
864 903 1.562942 AGCAGATTCAGGCCAGATTCA 59.437 47.619 18.74 0.00 0.00 2.57
865 904 1.948145 CAGCAGATTCAGGCCAGATTC 59.052 52.381 5.01 8.86 0.00 2.52
866 905 1.562942 TCAGCAGATTCAGGCCAGATT 59.437 47.619 5.01 0.00 0.00 2.40
867 906 1.210538 TCAGCAGATTCAGGCCAGAT 58.789 50.000 5.01 0.00 0.00 2.90
868 907 0.986527 TTCAGCAGATTCAGGCCAGA 59.013 50.000 5.01 0.00 0.00 3.86
869 908 1.676529 CATTCAGCAGATTCAGGCCAG 59.323 52.381 5.01 0.00 0.00 4.85
870 909 1.758936 CATTCAGCAGATTCAGGCCA 58.241 50.000 5.01 0.00 0.00 5.36
871 910 0.384669 GCATTCAGCAGATTCAGGCC 59.615 55.000 0.00 0.00 44.79 5.19
872 911 3.940723 GCATTCAGCAGATTCAGGC 57.059 52.632 0.00 0.00 44.79 4.85
910 949 1.733399 GTTTTCTCGGCGAGCTCGT 60.733 57.895 34.46 0.00 42.22 4.18
912 951 2.101233 GGGTTTTCTCGGCGAGCTC 61.101 63.158 31.01 18.91 0.00 4.09
918 964 2.282180 TGCCTGGGTTTTCTCGGC 60.282 61.111 0.00 0.00 39.29 5.54
954 1000 1.742140 CTGTGCTGCTCTGCTCCTG 60.742 63.158 0.00 0.00 0.00 3.86
1399 1452 2.430921 CACCAGCACGTCGAGGAC 60.431 66.667 12.85 3.50 0.00 3.85
1539 1592 2.581354 CAGACCTCCCGAGCCTTG 59.419 66.667 0.00 0.00 0.00 3.61
1623 1676 1.812922 GATGCAGCCCTCGTCACAG 60.813 63.158 0.00 0.00 0.00 3.66
1744 1797 1.367840 ACGTGAGTGCCCTCTTGAC 59.632 57.895 0.00 0.00 46.97 3.18
1791 1844 1.742761 AGATCACAGCATTGGGAACG 58.257 50.000 0.00 0.00 40.86 3.95
1987 2040 2.399356 GGCACAAACCTAGGCGAGC 61.399 63.158 9.30 7.96 0.00 5.03
2049 2102 0.250513 CTACCTGCACTTGACCTCCC 59.749 60.000 0.00 0.00 0.00 4.30
2229 2282 3.513515 GCCCATCTATCAAGGAGGAGTAG 59.486 52.174 0.00 0.00 0.00 2.57
2258 2311 4.536765 TGCTATTTCCATCTTCCCTTTCC 58.463 43.478 0.00 0.00 0.00 3.13
2445 2498 2.485814 GCAGAGACCATCAACAAGAACC 59.514 50.000 0.00 0.00 0.00 3.62
2691 2744 6.884836 TCAGTAGTGAGTAAGTGAAGCTATCA 59.115 38.462 0.00 0.00 35.05 2.15
2718 2771 1.968017 AAGCATGCACTGTCCACGG 60.968 57.895 21.98 0.00 0.00 4.94
2833 2889 8.249638 TGTTTCAACAGTTTTGAGATCATTTGA 58.750 29.630 0.00 0.00 34.30 2.69
2901 2957 2.291741 GTGAACTGGGCTTCTGTGAAAG 59.708 50.000 0.00 0.00 0.00 2.62
3055 3114 4.640771 TTACCTTGAGAAGCAGGTTCAT 57.359 40.909 14.73 0.00 37.67 2.57
3074 3133 6.041409 TGTGAAATTGGCTGAACCTTCATTTA 59.959 34.615 0.00 0.00 40.22 1.40
3209 3281 5.009410 AGCCATCTGTGTTTCTTTGAGAAAG 59.991 40.000 3.51 0.00 44.07 2.62
3210 3282 4.889409 AGCCATCTGTGTTTCTTTGAGAAA 59.111 37.500 0.00 0.00 41.51 2.52
3211 3283 4.464008 AGCCATCTGTGTTTCTTTGAGAA 58.536 39.130 0.00 0.00 31.28 2.87
3212 3284 4.090761 AGCCATCTGTGTTTCTTTGAGA 57.909 40.909 0.00 0.00 0.00 3.27
3213 3285 7.615582 TTATAGCCATCTGTGTTTCTTTGAG 57.384 36.000 0.00 0.00 0.00 3.02
3214 3286 7.828717 TCATTATAGCCATCTGTGTTTCTTTGA 59.171 33.333 0.00 0.00 0.00 2.69
3215 3287 7.988737 TCATTATAGCCATCTGTGTTTCTTTG 58.011 34.615 0.00 0.00 0.00 2.77
3216 3288 8.462016 GTTCATTATAGCCATCTGTGTTTCTTT 58.538 33.333 0.00 0.00 0.00 2.52
3217 3289 7.611467 TGTTCATTATAGCCATCTGTGTTTCTT 59.389 33.333 0.00 0.00 0.00 2.52
3218 3290 7.112122 TGTTCATTATAGCCATCTGTGTTTCT 58.888 34.615 0.00 0.00 0.00 2.52
3219 3291 7.280876 TCTGTTCATTATAGCCATCTGTGTTTC 59.719 37.037 0.00 0.00 0.00 2.78
3220 3292 7.112122 TCTGTTCATTATAGCCATCTGTGTTT 58.888 34.615 0.00 0.00 0.00 2.83
3221 3293 6.653020 TCTGTTCATTATAGCCATCTGTGTT 58.347 36.000 0.00 0.00 0.00 3.32
3222 3294 6.239217 TCTGTTCATTATAGCCATCTGTGT 57.761 37.500 0.00 0.00 0.00 3.72
3223 3295 5.178996 GCTCTGTTCATTATAGCCATCTGTG 59.821 44.000 0.00 0.00 0.00 3.66
3224 3296 5.071519 AGCTCTGTTCATTATAGCCATCTGT 59.928 40.000 0.00 0.00 33.63 3.41
3364 3436 2.562635 CATCTCCGTCTCTACTCCGAA 58.437 52.381 0.00 0.00 0.00 4.30
3396 3468 6.295292 CCATTATAGTCCTAGTGCAGCATGTA 60.295 42.308 0.00 0.00 39.31 2.29
3417 3489 3.467803 GGTTTAGCGTGCTAGATCCATT 58.532 45.455 1.39 0.00 0.00 3.16
3418 3490 2.545952 CGGTTTAGCGTGCTAGATCCAT 60.546 50.000 1.39 0.00 0.00 3.41
3419 3491 1.202371 CGGTTTAGCGTGCTAGATCCA 60.202 52.381 1.39 0.00 0.00 3.41
3420 3492 1.488527 CGGTTTAGCGTGCTAGATCC 58.511 55.000 1.39 5.58 0.00 3.36
3421 3493 0.853419 GCGGTTTAGCGTGCTAGATC 59.147 55.000 1.39 0.00 0.00 2.75
3422 3494 0.460311 AGCGGTTTAGCGTGCTAGAT 59.540 50.000 1.39 0.00 43.00 1.98
3423 3495 0.245539 AAGCGGTTTAGCGTGCTAGA 59.754 50.000 1.39 0.00 43.00 2.43
3424 3496 0.645868 GAAGCGGTTTAGCGTGCTAG 59.354 55.000 0.00 0.00 43.00 3.42
3425 3497 0.245539 AGAAGCGGTTTAGCGTGCTA 59.754 50.000 0.00 0.00 43.00 3.49
3426 3498 1.004918 AGAAGCGGTTTAGCGTGCT 60.005 52.632 0.00 0.00 43.00 4.40
3427 3499 1.132640 CAGAAGCGGTTTAGCGTGC 59.867 57.895 0.00 0.00 43.00 5.34
3428 3500 0.163788 CACAGAAGCGGTTTAGCGTG 59.836 55.000 0.00 3.33 43.00 5.34
3429 3501 1.566018 GCACAGAAGCGGTTTAGCGT 61.566 55.000 0.00 0.00 43.00 5.07
3430 3502 1.132640 GCACAGAAGCGGTTTAGCG 59.867 57.895 0.00 0.00 43.00 4.26
3431 3503 0.166814 CAGCACAGAAGCGGTTTAGC 59.833 55.000 0.00 3.81 40.15 3.09
3432 3504 0.798776 CCAGCACAGAAGCGGTTTAG 59.201 55.000 0.00 0.00 40.15 1.85
3433 3505 0.605319 CCCAGCACAGAAGCGGTTTA 60.605 55.000 0.00 0.00 40.15 2.01
3434 3506 1.898574 CCCAGCACAGAAGCGGTTT 60.899 57.895 0.00 0.00 40.15 3.27
3435 3507 2.281761 CCCAGCACAGAAGCGGTT 60.282 61.111 0.00 0.00 40.15 4.44
3436 3508 3.120086 AACCCAGCACAGAAGCGGT 62.120 57.895 0.00 0.00 40.15 5.68
3437 3509 2.281761 AACCCAGCACAGAAGCGG 60.282 61.111 0.00 0.00 40.15 5.52
3438 3510 0.957395 ATCAACCCAGCACAGAAGCG 60.957 55.000 0.00 0.00 40.15 4.68
3439 3511 2.113860 TATCAACCCAGCACAGAAGC 57.886 50.000 0.00 0.00 0.00 3.86
3440 3512 4.769688 TGTATATCAACCCAGCACAGAAG 58.230 43.478 0.00 0.00 0.00 2.85
3441 3513 4.835284 TGTATATCAACCCAGCACAGAA 57.165 40.909 0.00 0.00 0.00 3.02
3442 3514 4.835284 TTGTATATCAACCCAGCACAGA 57.165 40.909 0.00 0.00 0.00 3.41
3443 3515 6.267817 CAATTTGTATATCAACCCAGCACAG 58.732 40.000 0.00 0.00 35.61 3.66
3444 3516 5.394005 GCAATTTGTATATCAACCCAGCACA 60.394 40.000 0.00 0.00 35.61 4.57
3445 3517 5.043248 GCAATTTGTATATCAACCCAGCAC 58.957 41.667 0.00 0.00 35.61 4.40
3446 3518 4.955450 AGCAATTTGTATATCAACCCAGCA 59.045 37.500 0.00 0.00 35.61 4.41
3447 3519 5.520376 AGCAATTTGTATATCAACCCAGC 57.480 39.130 0.00 0.00 35.61 4.85
3461 3533 3.973657 AGCTCAGAACACAAGCAATTTG 58.026 40.909 0.00 0.00 42.68 2.32
3462 3534 4.320788 GCTAGCTCAGAACACAAGCAATTT 60.321 41.667 7.70 0.00 38.51 1.82
3463 3535 3.190118 GCTAGCTCAGAACACAAGCAATT 59.810 43.478 7.70 0.00 38.51 2.32
3464 3536 2.746362 GCTAGCTCAGAACACAAGCAAT 59.254 45.455 7.70 0.00 38.51 3.56
3465 3537 2.146342 GCTAGCTCAGAACACAAGCAA 58.854 47.619 7.70 0.00 38.51 3.91
3466 3538 1.609061 GGCTAGCTCAGAACACAAGCA 60.609 52.381 15.72 0.00 38.51 3.91
3467 3539 1.082690 GGCTAGCTCAGAACACAAGC 58.917 55.000 15.72 0.00 36.27 4.01
3468 3540 1.067565 TCGGCTAGCTCAGAACACAAG 60.068 52.381 15.72 0.00 0.00 3.16
3469 3541 0.966179 TCGGCTAGCTCAGAACACAA 59.034 50.000 15.72 0.00 0.00 3.33
3470 3542 0.528017 CTCGGCTAGCTCAGAACACA 59.472 55.000 15.72 0.00 0.00 3.72
3471 3543 3.337398 CTCGGCTAGCTCAGAACAC 57.663 57.895 15.72 0.00 0.00 3.32
3481 3553 1.606668 CTCTACTCCAAGCTCGGCTAG 59.393 57.143 0.00 0.00 38.25 3.42
3482 3554 1.212195 TCTCTACTCCAAGCTCGGCTA 59.788 52.381 0.00 0.00 38.25 3.93
3483 3555 0.033991 TCTCTACTCCAAGCTCGGCT 60.034 55.000 0.00 0.00 42.56 5.52
3484 3556 0.101579 GTCTCTACTCCAAGCTCGGC 59.898 60.000 0.00 0.00 0.00 5.54
3485 3557 0.378962 CGTCTCTACTCCAAGCTCGG 59.621 60.000 0.00 0.00 0.00 4.63
3486 3558 0.378962 CCGTCTCTACTCCAAGCTCG 59.621 60.000 0.00 0.00 0.00 5.03
3487 3559 1.673920 CTCCGTCTCTACTCCAAGCTC 59.326 57.143 0.00 0.00 0.00 4.09
3488 3560 1.282447 TCTCCGTCTCTACTCCAAGCT 59.718 52.381 0.00 0.00 0.00 3.74
3489 3561 1.752683 TCTCCGTCTCTACTCCAAGC 58.247 55.000 0.00 0.00 0.00 4.01
3490 3562 2.034053 GCATCTCCGTCTCTACTCCAAG 59.966 54.545 0.00 0.00 0.00 3.61
3491 3563 2.025155 GCATCTCCGTCTCTACTCCAA 58.975 52.381 0.00 0.00 0.00 3.53
3492 3564 1.064685 TGCATCTCCGTCTCTACTCCA 60.065 52.381 0.00 0.00 0.00 3.86
3493 3565 1.681538 TGCATCTCCGTCTCTACTCC 58.318 55.000 0.00 0.00 0.00 3.85
3494 3566 2.685897 ACTTGCATCTCCGTCTCTACTC 59.314 50.000 0.00 0.00 0.00 2.59
3495 3567 2.425312 CACTTGCATCTCCGTCTCTACT 59.575 50.000 0.00 0.00 0.00 2.57
3496 3568 2.164624 ACACTTGCATCTCCGTCTCTAC 59.835 50.000 0.00 0.00 0.00 2.59
3497 3569 2.164422 CACACTTGCATCTCCGTCTCTA 59.836 50.000 0.00 0.00 0.00 2.43
3498 3570 1.067283 CACACTTGCATCTCCGTCTCT 60.067 52.381 0.00 0.00 0.00 3.10
3499 3571 1.354040 CACACTTGCATCTCCGTCTC 58.646 55.000 0.00 0.00 0.00 3.36
3500 3572 3.521995 CACACTTGCATCTCCGTCT 57.478 52.632 0.00 0.00 0.00 4.18
3522 3594 2.967599 TAGTCCTAGTGCAGCATGTG 57.032 50.000 0.00 0.00 39.31 3.21
3523 3595 5.512060 CCATTATAGTCCTAGTGCAGCATGT 60.512 44.000 0.00 0.00 39.31 3.21
3524 3596 4.934001 CCATTATAGTCCTAGTGCAGCATG 59.066 45.833 0.00 0.00 40.87 4.06
3525 3597 4.840680 TCCATTATAGTCCTAGTGCAGCAT 59.159 41.667 0.00 0.00 0.00 3.79
3526 3598 4.039245 GTCCATTATAGTCCTAGTGCAGCA 59.961 45.833 0.00 0.00 0.00 4.41
3527 3599 4.561105 GTCCATTATAGTCCTAGTGCAGC 58.439 47.826 0.00 0.00 0.00 5.25
3528 3600 4.519350 TCGTCCATTATAGTCCTAGTGCAG 59.481 45.833 0.00 0.00 0.00 4.41
3529 3601 4.466827 TCGTCCATTATAGTCCTAGTGCA 58.533 43.478 0.00 0.00 0.00 4.57
3530 3602 5.646577 ATCGTCCATTATAGTCCTAGTGC 57.353 43.478 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.