Multiple sequence alignment - TraesCS5A01G225100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G225100 chr5A 100.000 5653 0 0 1 5653 440261022 440266674 0.000000e+00 10440.0
1 TraesCS5A01G225100 chr5A 92.197 487 32 5 3603 4086 186134161 186134644 0.000000e+00 684.0
2 TraesCS5A01G225100 chr5A 90.076 131 9 4 3606 3735 515748008 515747881 3.500000e-37 167.0
3 TraesCS5A01G225100 chr5A 88.542 96 11 0 1049 1144 478993120 478993025 3.580000e-22 117.0
4 TraesCS5A01G225100 chr5A 85.149 101 14 1 1044 1143 479046974 479047074 1.000000e-17 102.0
5 TraesCS5A01G225100 chr5A 96.970 33 1 0 4558 4590 350236269 350236237 7.910000e-04 56.5
6 TraesCS5A01G225100 chr5D 91.843 3114 152 45 2024 5080 339353513 339356581 0.000000e+00 4250.0
7 TraesCS5A01G225100 chr5D 92.688 1354 57 16 713 2038 339352124 339353463 0.000000e+00 1914.0
8 TraesCS5A01G225100 chr5D 88.000 750 32 28 1 728 339351393 339352106 0.000000e+00 833.0
9 TraesCS5A01G225100 chr5D 80.475 379 66 7 2612 2984 264017849 264017473 3.330000e-72 283.0
10 TraesCS5A01G225100 chr5D 95.783 166 7 0 5093 5258 339356629 339356794 9.340000e-68 268.0
11 TraesCS5A01G225100 chr5D 96.970 33 1 0 4558 4590 264017285 264017253 7.910000e-04 56.5
12 TraesCS5A01G225100 chr5B 91.195 1942 93 42 118 2037 398345289 398347174 0.000000e+00 2567.0
13 TraesCS5A01G225100 chr5B 88.878 1043 80 15 2022 3046 398347185 398348209 0.000000e+00 1251.0
14 TraesCS5A01G225100 chr5B 92.308 845 41 11 3530 4357 398348936 398349773 0.000000e+00 1179.0
15 TraesCS5A01G225100 chr5B 88.876 881 57 21 4413 5258 398349802 398350676 0.000000e+00 1046.0
16 TraesCS5A01G225100 chr5B 89.316 468 27 11 3068 3532 398348418 398348865 2.960000e-157 566.0
17 TraesCS5A01G225100 chr5B 93.814 97 6 0 31 127 398344971 398345067 4.560000e-31 147.0
18 TraesCS5A01G225100 chr5B 93.220 59 2 2 4342 4399 549974407 549974350 1.010000e-12 86.1
19 TraesCS5A01G225100 chr5B 96.970 33 1 0 4558 4590 296377150 296377118 7.910000e-04 56.5
20 TraesCS5A01G225100 chr7A 95.939 394 15 1 5260 5653 705077781 705078173 6.180000e-179 638.0
21 TraesCS5A01G225100 chr7A 94.670 394 21 0 5260 5653 488800351 488799958 3.740000e-171 612.0
22 TraesCS5A01G225100 chr7A 86.598 194 26 0 1500 1693 102289786 102289593 1.230000e-51 215.0
23 TraesCS5A01G225100 chr4A 95.685 394 17 0 5260 5653 581602870 581602477 7.990000e-178 634.0
24 TraesCS5A01G225100 chr4A 95.420 393 18 0 5260 5652 605611545 605611153 1.340000e-175 627.0
25 TraesCS5A01G225100 chr1A 95.190 395 19 0 5259 5653 499597568 499597962 4.810000e-175 625.0
26 TraesCS5A01G225100 chr1A 92.029 138 7 4 3603 3739 578255850 578255984 2.080000e-44 191.0
27 TraesCS5A01G225100 chrUn 95.178 394 19 0 5260 5653 146972015 146972408 1.730000e-174 623.0
28 TraesCS5A01G225100 chr2A 95.178 394 19 0 5260 5653 22966881 22967274 1.730000e-174 623.0
29 TraesCS5A01G225100 chr2A 95.178 394 19 0 5260 5653 23257233 23256840 1.730000e-174 623.0
30 TraesCS5A01G225100 chr2A 94.670 394 21 0 5260 5653 22738087 22738480 3.740000e-171 612.0
31 TraesCS5A01G225100 chr2A 87.143 70 5 3 4351 4420 394943761 394943826 6.070000e-10 76.8
32 TraesCS5A01G225100 chr2A 87.143 70 5 3 4351 4420 406234585 406234520 6.070000e-10 76.8
33 TraesCS5A01G225100 chr7D 86.598 194 26 0 1500 1693 99873536 99873343 1.230000e-51 215.0
34 TraesCS5A01G225100 chr7B 86.667 195 24 2 1500 1693 55066337 55066144 1.230000e-51 215.0
35 TraesCS5A01G225100 chr7B 85.567 194 28 0 1500 1693 55035182 55034989 2.670000e-48 204.0
36 TraesCS5A01G225100 chr6A 90.909 143 7 6 3603 3744 437966559 437966696 2.690000e-43 187.0
37 TraesCS5A01G225100 chr3D 96.364 55 1 1 4346 4399 436676994 436676940 7.800000e-14 89.8
38 TraesCS5A01G225100 chr2D 94.828 58 1 2 4347 4402 556926420 556926477 7.800000e-14 89.8
39 TraesCS5A01G225100 chr6D 96.296 54 0 2 4350 4402 7865911 7865963 2.810000e-13 87.9
40 TraesCS5A01G225100 chr1D 96.296 54 1 1 4347 4400 45495782 45495834 2.810000e-13 87.9
41 TraesCS5A01G225100 chr6B 88.571 70 4 3 4351 4420 351226135 351226070 1.310000e-11 82.4
42 TraesCS5A01G225100 chr1B 84.270 89 9 2 2848 2931 626236679 626236767 1.310000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G225100 chr5A 440261022 440266674 5652 False 10440.00 10440 100.000000 1 5653 1 chr5A.!!$F2 5652
1 TraesCS5A01G225100 chr5D 339351393 339356794 5401 False 1816.25 4250 92.078500 1 5258 4 chr5D.!!$F1 5257
2 TraesCS5A01G225100 chr5B 398344971 398350676 5705 False 1126.00 2567 90.731167 31 5258 6 chr5B.!!$F1 5227

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
633 885 0.032540 GGGACAACTGGCTGCAAAAG 59.967 55.0 0.50 0.0 0.00 2.27 F
852 1145 0.108567 GCCCTCTCGTTCTCTCAACC 60.109 60.0 0.00 0.0 0.00 3.77 F
906 1199 0.240945 CCCAAACTTAACCAGCAGCG 59.759 55.0 0.00 0.0 0.00 5.18 F
2377 2786 0.250252 TTCACGGCTGATGCAAGTCA 60.250 50.0 0.00 0.0 41.91 3.41 F
2995 3419 0.179048 CGCATGCAACATCCTCCCTA 60.179 55.0 19.57 0.0 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1450 1762 0.162507 CGTGAGCAACTGAAGCGAAG 59.837 55.0 0.0 0.00 37.01 3.79 R
2495 2908 0.243636 CCGTGGTGAATGCTTTTCCC 59.756 55.0 0.0 0.00 0.00 3.97 R
2549 2962 0.872021 GGCGCTGACGTCATCCTTAG 60.872 60.0 20.4 7.31 45.32 2.18 R
3448 4067 0.034574 AGGGTTTGTGTCAGTGTGCA 60.035 50.0 0.0 0.00 0.00 4.57 R
4988 5721 0.037447 GGAGAAGGTCCTGCAAGCTT 59.963 55.0 0.0 2.56 42.99 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.679905 GCGACCACTACTGGCTATAAAGTT 60.680 45.833 0.00 0.00 42.08 2.66
28 29 5.416947 CGACCACTACTGGCTATAAAGTTT 58.583 41.667 0.00 0.00 42.08 2.66
29 30 5.291128 CGACCACTACTGGCTATAAAGTTTG 59.709 44.000 0.00 0.00 42.08 2.93
39 40 6.646267 TGGCTATAAAGTTTGTAGTGGTAGG 58.354 40.000 17.55 0.00 0.00 3.18
44 45 4.897509 AAGTTTGTAGTGGTAGGGGTAC 57.102 45.455 0.00 0.00 0.00 3.34
205 445 2.582498 GCCGCGCCTACAGTACAG 60.582 66.667 0.00 0.00 0.00 2.74
206 446 2.882876 CCGCGCCTACAGTACAGT 59.117 61.111 0.00 0.00 0.00 3.55
207 447 1.996786 GCCGCGCCTACAGTACAGTA 61.997 60.000 0.00 0.00 0.00 2.74
208 448 0.248377 CCGCGCCTACAGTACAGTAC 60.248 60.000 0.00 2.05 0.00 2.73
209 449 0.448990 CGCGCCTACAGTACAGTACA 59.551 55.000 13.37 0.00 0.00 2.90
213 453 3.703420 CGCCTACAGTACAGTACAATCC 58.297 50.000 13.37 0.00 0.00 3.01
220 460 3.128764 CAGTACAGTACAATCCGAGAGCA 59.871 47.826 13.37 0.00 0.00 4.26
246 486 0.389948 CCGCTGTTAACCGAGAGCTT 60.390 55.000 12.28 0.00 34.06 3.74
248 488 0.444260 GCTGTTAACCGAGAGCTTGC 59.556 55.000 2.48 0.00 33.49 4.01
249 489 0.716108 CTGTTAACCGAGAGCTTGCG 59.284 55.000 2.48 0.00 0.00 4.85
250 490 1.289109 TGTTAACCGAGAGCTTGCGC 61.289 55.000 0.00 0.00 0.00 6.09
251 491 2.092291 TTAACCGAGAGCTTGCGCG 61.092 57.895 0.00 0.00 42.32 6.86
252 492 2.480853 TTAACCGAGAGCTTGCGCGA 62.481 55.000 12.10 0.00 42.32 5.87
295 535 1.446272 CCGTCGAACCTTCAGGAGC 60.446 63.158 0.00 0.00 38.94 4.70
299 539 0.321671 TCGAACCTTCAGGAGCAAGG 59.678 55.000 0.00 0.00 45.41 3.61
393 633 5.279306 GCATGCAGATGTTCCAATATCCAAT 60.279 40.000 14.21 0.00 31.50 3.16
394 634 6.071784 GCATGCAGATGTTCCAATATCCAATA 60.072 38.462 14.21 0.00 31.50 1.90
396 636 8.528643 CATGCAGATGTTCCAATATCCAATAAT 58.471 33.333 0.00 0.00 0.00 1.28
397 637 8.114331 TGCAGATGTTCCAATATCCAATAATC 57.886 34.615 0.00 0.00 0.00 1.75
398 638 7.177216 TGCAGATGTTCCAATATCCAATAATCC 59.823 37.037 0.00 0.00 0.00 3.01
399 639 7.177216 GCAGATGTTCCAATATCCAATAATCCA 59.823 37.037 0.00 0.00 0.00 3.41
400 640 9.081204 CAGATGTTCCAATATCCAATAATCCAA 57.919 33.333 0.00 0.00 0.00 3.53
401 641 9.659135 AGATGTTCCAATATCCAATAATCCAAA 57.341 29.630 0.00 0.00 0.00 3.28
417 657 9.601217 AATAATCCAAATATAGTACCATCTCGC 57.399 33.333 0.00 0.00 0.00 5.03
462 708 1.153429 ACGCCTCGTGCCTAATTCC 60.153 57.895 0.00 0.00 39.18 3.01
468 714 2.289565 CTCGTGCCTAATTCCTTTCCC 58.710 52.381 0.00 0.00 0.00 3.97
510 756 0.383231 ATTCCTACCCTAACGTCGCG 59.617 55.000 0.00 0.00 0.00 5.87
538 784 3.334691 ACAGTAATAACGCACAGTGCAT 58.665 40.909 25.19 15.28 45.36 3.96
539 785 3.751175 ACAGTAATAACGCACAGTGCATT 59.249 39.130 25.19 18.97 45.36 3.56
540 786 4.932799 ACAGTAATAACGCACAGTGCATTA 59.067 37.500 25.19 20.59 45.36 1.90
541 787 5.584649 ACAGTAATAACGCACAGTGCATTAT 59.415 36.000 25.19 21.90 42.61 1.28
579 830 2.747436 ACTTACCACGGTCGAAGTTTC 58.253 47.619 0.00 0.00 0.00 2.78
632 884 1.398958 GGGGACAACTGGCTGCAAAA 61.399 55.000 0.50 0.00 0.00 2.44
633 885 0.032540 GGGACAACTGGCTGCAAAAG 59.967 55.000 0.50 0.00 0.00 2.27
635 887 1.136891 GGACAACTGGCTGCAAAAGTT 59.863 47.619 0.50 5.41 34.52 2.66
637 889 1.574134 CAACTGGCTGCAAAAGTTGG 58.426 50.000 23.41 12.11 44.50 3.77
638 890 1.134729 CAACTGGCTGCAAAAGTTGGT 60.135 47.619 23.41 0.00 44.50 3.67
639 891 0.461135 ACTGGCTGCAAAAGTTGGTG 59.539 50.000 0.50 0.00 0.00 4.17
640 892 0.249573 CTGGCTGCAAAAGTTGGTGG 60.250 55.000 0.50 0.00 0.00 4.61
641 893 1.595109 GGCTGCAAAAGTTGGTGGC 60.595 57.895 0.50 0.00 0.00 5.01
653 910 2.047560 GGTGGCGGTGGTACAGAC 60.048 66.667 0.00 0.00 41.80 3.51
663 920 1.509923 GGTACAGACCTTCCGTCGG 59.490 63.158 4.39 4.39 46.92 4.79
723 984 4.898829 TTCACCCGCTAATGATTCATTG 57.101 40.909 19.81 11.68 35.54 2.82
733 1026 5.335740 GCTAATGATTCATTGGAGCCATGAG 60.336 44.000 22.55 10.19 34.90 2.90
755 1048 5.658468 AGAACCAGGAAGCTTATTACGTAC 58.342 41.667 0.00 0.00 0.00 3.67
756 1049 5.421374 AGAACCAGGAAGCTTATTACGTACT 59.579 40.000 0.00 0.00 0.00 2.73
757 1050 6.604795 AGAACCAGGAAGCTTATTACGTACTA 59.395 38.462 0.00 0.00 0.00 1.82
758 1051 6.141560 ACCAGGAAGCTTATTACGTACTAC 57.858 41.667 0.00 0.00 0.00 2.73
788 1081 2.164219 TGTTACCGCCTTACCTAACTCG 59.836 50.000 0.00 0.00 0.00 4.18
812 1105 3.873812 CCGTCCATAGGGGCCACC 61.874 72.222 0.00 0.57 34.31 4.61
852 1145 0.108567 GCCCTCTCGTTCTCTCAACC 60.109 60.000 0.00 0.00 0.00 3.77
901 1194 0.879090 GACGCCCCAAACTTAACCAG 59.121 55.000 0.00 0.00 0.00 4.00
906 1199 0.240945 CCCAAACTTAACCAGCAGCG 59.759 55.000 0.00 0.00 0.00 5.18
925 1218 2.033675 GCGGTAGAGCTCCTTCTTCTAC 59.966 54.545 10.93 4.29 34.27 2.59
1190 1489 7.252612 TCCAGATTCAAGTTCATAGTAACCA 57.747 36.000 0.00 0.00 0.00 3.67
1206 1513 1.873698 ACCAACGACATTACTGCGTT 58.126 45.000 8.63 8.63 42.01 4.84
1225 1532 2.815503 GTTGCTTAACTTCGGGGCTAAA 59.184 45.455 0.00 0.00 0.00 1.85
1227 1534 3.692690 TGCTTAACTTCGGGGCTAAATT 58.307 40.909 0.00 0.00 0.00 1.82
1228 1535 3.442273 TGCTTAACTTCGGGGCTAAATTG 59.558 43.478 0.00 0.00 0.00 2.32
1271 1583 1.627943 CGAAGAACGCGCATCTGAG 59.372 57.895 14.84 8.85 34.51 3.35
1448 1760 0.722469 GTTCGTTGCGTGCTGATGTG 60.722 55.000 0.00 0.00 0.00 3.21
1450 1762 1.154599 CGTTGCGTGCTGATGTGTC 60.155 57.895 0.00 0.00 0.00 3.67
1455 1767 1.417592 CGTGCTGATGTGTCTTCGC 59.582 57.895 0.00 0.00 0.00 4.70
1490 1802 2.191354 CTGCGGTGAACTCGGTCGTA 62.191 60.000 0.00 0.00 0.00 3.43
1594 1906 2.663852 CGGGTGGTGTTCACGTCC 60.664 66.667 0.00 2.52 46.96 4.79
1703 2030 1.972872 AACCAAGGTCAGCAGTTCAG 58.027 50.000 0.00 0.00 0.00 3.02
1795 2122 3.063997 CGTTAGTTGCATCCATCCAGAAC 59.936 47.826 0.00 0.00 0.00 3.01
1812 2139 3.192212 CAGAACAGGCAGAAAATCCCTTC 59.808 47.826 0.00 0.00 0.00 3.46
1813 2140 2.222227 ACAGGCAGAAAATCCCTTCC 57.778 50.000 0.00 0.00 0.00 3.46
1814 2141 1.428912 ACAGGCAGAAAATCCCTTCCA 59.571 47.619 0.00 0.00 0.00 3.53
1843 2170 5.301805 ACCGAATAGGCAGAAAATTAATGGG 59.698 40.000 0.00 0.00 46.52 4.00
1851 2178 8.144862 AGGCAGAAAATTAATGGGTTTAATCA 57.855 30.769 0.00 0.00 39.15 2.57
1871 2198 1.278985 ACATGCCCTCTTGTGATCGAA 59.721 47.619 0.00 0.00 30.49 3.71
1902 2232 9.685276 AAACAGGACATGATTAATTGTATGAGA 57.315 29.630 0.00 0.00 0.00 3.27
1967 2297 7.778470 AGTTTTCTCAACAACAACAACAAAA 57.222 28.000 0.00 0.00 0.00 2.44
2061 2457 5.470098 GGTACCGTACTCATACCGATTAAGA 59.530 44.000 8.57 0.00 0.00 2.10
2064 2460 5.591877 ACCGTACTCATACCGATTAAGAAGT 59.408 40.000 0.00 0.00 0.00 3.01
2101 2497 4.675114 GCTAAATTATGTCGAAATTGGCCG 59.325 41.667 0.00 0.00 0.00 6.13
2126 2522 6.453396 GCACGCATAAACAGTAAGTACACTAC 60.453 42.308 0.00 0.00 0.00 2.73
2127 2523 5.796935 ACGCATAAACAGTAAGTACACTACG 59.203 40.000 0.00 0.00 0.00 3.51
2139 2535 2.319136 ACACTACGCAGTTTTGGTGA 57.681 45.000 0.00 0.00 37.78 4.02
2166 2563 2.998279 GCAGCCGGCATCTTGCTTT 61.998 57.895 31.54 0.00 44.28 3.51
2194 2591 1.745653 TCACACAAACATTCGGCAACA 59.254 42.857 0.00 0.00 0.00 3.33
2202 2599 1.196808 ACATTCGGCAACATCGTTCAC 59.803 47.619 0.00 0.00 0.00 3.18
2204 2601 0.533085 TTCGGCAACATCGTTCACCA 60.533 50.000 0.00 0.00 0.00 4.17
2248 2645 2.443887 TTCCTCCAACGTACGGAAAG 57.556 50.000 21.06 10.75 32.92 2.62
2316 2713 3.587923 TGGGTAAGACGATTAACCAACG 58.412 45.455 16.21 0.00 38.69 4.10
2324 2721 2.676342 ACGATTAACCAACGGATCAAGC 59.324 45.455 0.00 0.00 0.00 4.01
2338 2735 3.435566 GATCAAGCGAAGACGTATCACA 58.564 45.455 0.00 0.00 41.98 3.58
2339 2736 2.863739 TCAAGCGAAGACGTATCACAG 58.136 47.619 0.00 0.00 41.98 3.66
2346 2751 3.372954 GAAGACGTATCACAGGATTCGG 58.627 50.000 8.24 0.00 45.23 4.30
2354 2759 3.526931 TCACAGGATTCGGAGTCAATC 57.473 47.619 2.83 0.00 0.00 2.67
2362 2767 4.093556 GGATTCGGAGTCAATCTTGTTCAC 59.906 45.833 2.83 0.00 31.82 3.18
2365 2770 1.464997 GGAGTCAATCTTGTTCACGGC 59.535 52.381 0.00 0.00 0.00 5.68
2373 2782 0.592637 CTTGTTCACGGCTGATGCAA 59.407 50.000 0.00 0.00 41.91 4.08
2377 2786 0.250252 TTCACGGCTGATGCAAGTCA 60.250 50.000 0.00 0.00 41.91 3.41
2387 2796 4.040445 TGATGCAAGTCATTATCGACGA 57.960 40.909 0.00 0.00 40.98 4.20
2392 2801 6.308371 TGCAAGTCATTATCGACGAGTATA 57.692 37.500 3.01 0.00 40.98 1.47
2393 2802 6.909909 TGCAAGTCATTATCGACGAGTATAT 58.090 36.000 3.01 0.00 40.98 0.86
2450 2863 4.326413 TCTTTGATTGCGAAGTTGATCG 57.674 40.909 0.00 0.00 45.41 3.69
2474 2887 1.941668 GCCTCTGTGCAAGTAGGACAC 60.942 57.143 12.45 0.00 44.19 3.67
2495 2908 4.500837 CACGGATGTCGACTAGAAAATCAG 59.499 45.833 17.92 12.58 42.43 2.90
2503 2916 4.935808 TCGACTAGAAAATCAGGGAAAAGC 59.064 41.667 0.00 0.00 0.00 3.51
2549 2962 0.300789 GCTGTCGCGTAACTATTGCC 59.699 55.000 5.77 0.00 0.00 4.52
2575 2988 4.719369 ACGTCAGCGCCGAACCTC 62.719 66.667 11.49 0.00 42.83 3.85
2576 2989 4.421479 CGTCAGCGCCGAACCTCT 62.421 66.667 2.29 0.00 0.00 3.69
2577 2990 2.811317 GTCAGCGCCGAACCTCTG 60.811 66.667 2.29 0.00 0.00 3.35
2579 2992 2.811317 CAGCGCCGAACCTCTGAC 60.811 66.667 2.29 0.00 0.00 3.51
2581 2994 2.125512 GCGCCGAACCTCTGACAT 60.126 61.111 0.00 0.00 0.00 3.06
2582 2995 2.456119 GCGCCGAACCTCTGACATG 61.456 63.158 0.00 0.00 0.00 3.21
2583 2996 1.811266 CGCCGAACCTCTGACATGG 60.811 63.158 0.00 0.00 0.00 3.66
2586 2999 0.458543 CCGAACCTCTGACATGGACG 60.459 60.000 0.00 6.76 0.00 4.79
2587 3000 0.526211 CGAACCTCTGACATGGACGA 59.474 55.000 0.00 0.00 0.00 4.20
2588 3001 1.468224 CGAACCTCTGACATGGACGAG 60.468 57.143 0.00 0.00 0.00 4.18
2589 3002 1.819288 GAACCTCTGACATGGACGAGA 59.181 52.381 0.00 0.00 0.00 4.04
2590 3003 2.151502 ACCTCTGACATGGACGAGAT 57.848 50.000 0.00 0.00 0.00 2.75
2591 3004 2.461695 ACCTCTGACATGGACGAGATT 58.538 47.619 0.00 0.00 0.00 2.40
2593 3006 3.261897 ACCTCTGACATGGACGAGATTTT 59.738 43.478 0.00 0.00 0.00 1.82
2703 3127 2.732016 CTCGTCGTGGTGAACCCA 59.268 61.111 0.00 0.00 42.51 4.51
2993 3417 2.484062 CCGCATGCAACATCCTCCC 61.484 63.158 19.57 0.00 0.00 4.30
2995 3419 0.179048 CGCATGCAACATCCTCCCTA 60.179 55.000 19.57 0.00 0.00 3.53
2999 3423 0.981183 TGCAACATCCTCCCTACGTT 59.019 50.000 0.00 0.00 0.00 3.99
3052 3480 3.063725 GCTGTCTCATGTTCTGATCTTGC 59.936 47.826 0.00 0.00 32.10 4.01
3053 3481 4.251268 CTGTCTCATGTTCTGATCTTGCA 58.749 43.478 0.00 0.00 32.10 4.08
3054 3482 4.644498 TGTCTCATGTTCTGATCTTGCAA 58.356 39.130 0.00 0.00 32.10 4.08
3066 3681 5.999600 TCTGATCTTGCAAAATCTCACTTCA 59.000 36.000 13.70 0.00 0.00 3.02
3078 3693 9.007901 CAAAATCTCACTTCAGAGGATTTACTT 57.992 33.333 0.00 0.00 36.30 2.24
3096 3711 9.601217 GATTTACTTGCTCTACTTGAGGATTTA 57.399 33.333 0.00 0.00 42.69 1.40
3121 3738 6.250711 AGGTTTAATTTGGTTAGTAGGGGTG 58.749 40.000 0.00 0.00 0.00 4.61
3141 3758 3.619038 GTGCTAGTAACTTGATGAGTGCC 59.381 47.826 0.00 0.00 39.00 5.01
3187 3805 2.446435 CTTGGTTAAGGTGGATGTGGG 58.554 52.381 0.00 0.00 0.00 4.61
3215 3833 2.692041 CCTAGGTTGGTAAGTAGGGACG 59.308 54.545 0.00 0.00 0.00 4.79
3302 3920 0.878523 CTGGTGACGCCACGAAAAGA 60.879 55.000 2.83 0.00 43.61 2.52
3303 3921 0.878523 TGGTGACGCCACGAAAAGAG 60.879 55.000 2.83 0.00 43.61 2.85
3304 3922 0.599204 GGTGACGCCACGAAAAGAGA 60.599 55.000 0.00 0.00 44.09 3.10
3444 4063 1.144716 CTCGCTGGCAGGCAAGATA 59.855 57.895 17.64 0.00 0.00 1.98
3446 4065 0.181114 TCGCTGGCAGGCAAGATAAT 59.819 50.000 17.64 0.00 0.00 1.28
3447 4066 1.416030 TCGCTGGCAGGCAAGATAATA 59.584 47.619 17.64 0.00 0.00 0.98
3448 4067 2.038952 TCGCTGGCAGGCAAGATAATAT 59.961 45.455 17.64 0.00 0.00 1.28
3449 4068 2.161012 CGCTGGCAGGCAAGATAATATG 59.839 50.000 17.64 0.00 0.00 1.78
3450 4069 2.094854 GCTGGCAGGCAAGATAATATGC 60.095 50.000 17.64 0.00 41.82 3.14
3451 4070 3.151554 CTGGCAGGCAAGATAATATGCA 58.848 45.455 6.61 0.00 44.32 3.96
3452 4071 2.886523 TGGCAGGCAAGATAATATGCAC 59.113 45.455 0.00 0.00 44.32 4.57
3453 4072 2.886523 GGCAGGCAAGATAATATGCACA 59.113 45.455 0.00 0.00 44.32 4.57
3454 4073 3.304928 GGCAGGCAAGATAATATGCACAC 60.305 47.826 0.00 0.00 44.32 3.82
3455 4074 3.567164 GCAGGCAAGATAATATGCACACT 59.433 43.478 0.00 0.00 44.32 3.55
3456 4075 4.556104 GCAGGCAAGATAATATGCACACTG 60.556 45.833 0.00 0.00 44.32 3.66
3457 4076 4.818005 CAGGCAAGATAATATGCACACTGA 59.182 41.667 0.00 0.00 44.32 3.41
3458 4077 4.818546 AGGCAAGATAATATGCACACTGAC 59.181 41.667 0.00 0.00 44.32 3.51
3466 4085 1.032014 ATGCACACTGACACAAACCC 58.968 50.000 0.00 0.00 0.00 4.11
3490 4109 5.386958 TCAGTTTGATCAGTACGTAAGCT 57.613 39.130 0.00 0.00 45.62 3.74
3491 4110 6.505044 TCAGTTTGATCAGTACGTAAGCTA 57.495 37.500 0.00 0.00 45.62 3.32
3492 4111 6.552629 TCAGTTTGATCAGTACGTAAGCTAG 58.447 40.000 0.00 0.00 45.62 3.42
3493 4112 6.150641 TCAGTTTGATCAGTACGTAAGCTAGT 59.849 38.462 0.00 0.00 45.62 2.57
3630 4327 3.864789 ACCCACTTTGAATGTCTGTCT 57.135 42.857 0.00 0.00 0.00 3.41
3639 4336 3.743521 TGAATGTCTGTCTTTGGTGGAG 58.256 45.455 0.00 0.00 0.00 3.86
3640 4337 3.136443 TGAATGTCTGTCTTTGGTGGAGT 59.864 43.478 0.00 0.00 0.00 3.85
3760 4457 5.845391 ATAGCTTACTCAGTTCCTCTGTC 57.155 43.478 0.00 0.00 43.97 3.51
3856 4555 2.037251 TGGTCAGGAAGTAGTGAAGTGC 59.963 50.000 0.00 0.00 0.00 4.40
3871 4570 6.653020 AGTGAAGTGCCAAGTGATCATATTA 58.347 36.000 0.00 0.00 0.00 0.98
3909 4608 6.436738 TGGCTAAATAACATATCCCGGTTA 57.563 37.500 0.00 0.00 34.32 2.85
3981 4681 9.550811 GTTTAAAATAGGAACCAAATCACGTAG 57.449 33.333 0.00 0.00 0.00 3.51
4027 4727 4.023193 ACCTGATGCCTTGTTTAAAACGAG 60.023 41.667 0.00 0.00 41.66 4.18
4053 4753 4.205065 TGTGCTGTGTGATCATCATACA 57.795 40.909 15.71 15.71 44.40 2.29
4066 4766 4.686972 TCATCATACACAGTAAGCTCAGC 58.313 43.478 0.00 0.00 0.00 4.26
4161 4866 6.098124 TGTGATCATCCAAAAACACTTTTCCT 59.902 34.615 0.00 0.00 32.24 3.36
4162 4867 7.286546 TGTGATCATCCAAAAACACTTTTCCTA 59.713 33.333 0.00 0.00 32.24 2.94
4163 4868 7.595130 GTGATCATCCAAAAACACTTTTCCTAC 59.405 37.037 0.00 0.00 32.24 3.18
4164 4869 6.399639 TCATCCAAAAACACTTTTCCTACC 57.600 37.500 0.00 0.00 32.24 3.18
4165 4870 6.133356 TCATCCAAAAACACTTTTCCTACCT 58.867 36.000 0.00 0.00 32.24 3.08
4203 4908 3.026694 AGCAGTGACCTTTCTTTTTGCT 58.973 40.909 0.00 0.00 35.96 3.91
4231 4936 6.041637 TGTGGTGAGTAGTGACTGTTCTTAAT 59.958 38.462 0.00 0.00 35.45 1.40
4257 4962 2.039746 ACGGATGGTGGAGAATGACAAA 59.960 45.455 0.00 0.00 0.00 2.83
4358 5085 4.878397 ACCTGCTGCAGTTTCATAATACTC 59.122 41.667 26.41 0.00 0.00 2.59
4362 5089 4.513318 GCTGCAGTTTCATAATACTCCCTC 59.487 45.833 16.64 0.00 0.00 4.30
4403 5130 8.754080 AGAGCATTTAGATCACTAAAGTGTACT 58.246 33.333 9.81 11.75 46.97 2.73
4442 5169 2.095059 GGCATCTTTGGTGACATGTGTC 60.095 50.000 1.15 6.21 44.97 3.67
4520 5249 1.239968 CCAACCAGAAGCTGCAGGAC 61.240 60.000 17.12 0.00 0.00 3.85
4553 5282 1.004918 CACCCCTGTCAACGACTCC 60.005 63.158 0.00 0.00 33.15 3.85
4614 5343 2.415843 CGGCGCCGAGGAAAGATA 59.584 61.111 44.86 0.00 42.83 1.98
4615 5344 1.006102 CGGCGCCGAGGAAAGATAT 60.006 57.895 44.86 0.00 42.83 1.63
4616 5345 1.009389 CGGCGCCGAGGAAAGATATC 61.009 60.000 44.86 0.83 42.83 1.63
4631 5360 3.443052 AGATATCATCCTCCCAGCAGAG 58.557 50.000 5.32 0.00 0.00 3.35
4646 5375 3.414700 GAGCTGGACGGTGCAACG 61.415 66.667 25.19 25.19 38.12 4.10
4706 5435 1.079681 GTAACGCGGTGGGACATCA 60.080 57.895 7.07 0.00 41.34 3.07
4718 5447 2.158769 TGGGACATCATATGTGGTCTGC 60.159 50.000 20.72 10.82 45.03 4.26
4768 5497 7.551262 TCGTGTTATTTATGTGGACTAAGCAAT 59.449 33.333 0.00 0.00 0.00 3.56
4842 5575 3.230522 CTTGGGTTTGCTGCCAGCC 62.231 63.158 15.29 9.57 41.51 4.85
4845 5578 2.653115 GGTTTGCTGCCAGCCTTC 59.347 61.111 15.29 3.95 41.51 3.46
4901 5634 3.188048 GTGCCTGAACATTCTCTCACAAG 59.812 47.826 0.00 0.00 0.00 3.16
4995 5728 6.975197 GGAATTTAGATAACAAGGAAGCTTGC 59.025 38.462 10.41 10.41 37.83 4.01
4998 5731 3.350833 AGATAACAAGGAAGCTTGCAGG 58.649 45.455 20.82 13.41 37.83 4.85
5021 5754 7.398618 CAGGACCTTCTCCACATATAGATACAT 59.601 40.741 0.00 0.00 42.46 2.29
5025 5758 8.177456 ACCTTCTCCACATATAGATACATGGTA 58.823 37.037 0.00 0.00 0.00 3.25
5058 5791 8.135529 GTGTTAAGTGTTCAAGAAATAGCCTTT 58.864 33.333 0.00 0.00 0.00 3.11
5065 5798 4.406456 TCAAGAAATAGCCTTTTGCCAGA 58.594 39.130 0.00 0.00 42.71 3.86
5072 5805 5.841957 ATAGCCTTTTGCCAGAACAATAG 57.158 39.130 0.00 0.00 42.71 1.73
5080 5813 2.910319 TGCCAGAACAATAGTGGTAGGT 59.090 45.455 0.00 0.00 33.51 3.08
5081 5814 4.098155 TGCCAGAACAATAGTGGTAGGTA 58.902 43.478 0.00 0.00 33.51 3.08
5082 5815 4.161565 TGCCAGAACAATAGTGGTAGGTAG 59.838 45.833 0.00 0.00 33.51 3.18
5083 5816 4.443034 GCCAGAACAATAGTGGTAGGTAGG 60.443 50.000 0.00 0.00 33.51 3.18
5085 5818 4.715297 CAGAACAATAGTGGTAGGTAGGGT 59.285 45.833 0.00 0.00 0.00 4.34
5086 5819 5.895534 CAGAACAATAGTGGTAGGTAGGGTA 59.104 44.000 0.00 0.00 0.00 3.69
5087 5820 6.553852 CAGAACAATAGTGGTAGGTAGGGTAT 59.446 42.308 0.00 0.00 0.00 2.73
5088 5821 6.553852 AGAACAATAGTGGTAGGTAGGGTATG 59.446 42.308 0.00 0.00 0.00 2.39
5089 5822 6.034442 ACAATAGTGGTAGGTAGGGTATGA 57.966 41.667 0.00 0.00 0.00 2.15
5090 5823 6.631107 ACAATAGTGGTAGGTAGGGTATGAT 58.369 40.000 0.00 0.00 0.00 2.45
5225 5993 6.606395 GGTAAGGACAGAAGAGTGGTTATAGA 59.394 42.308 0.00 0.00 0.00 1.98
5258 6027 5.828299 TGGTGTAACTTTCAAGTTTCAGG 57.172 39.130 10.15 0.00 46.52 3.86
5259 6028 4.097286 TGGTGTAACTTTCAAGTTTCAGGC 59.903 41.667 10.15 1.75 46.52 4.85
5260 6029 4.097286 GGTGTAACTTTCAAGTTTCAGGCA 59.903 41.667 10.15 1.21 46.52 4.75
5261 6030 5.034797 GTGTAACTTTCAAGTTTCAGGCAC 58.965 41.667 10.15 8.41 46.52 5.01
5262 6031 4.947388 TGTAACTTTCAAGTTTCAGGCACT 59.053 37.500 10.15 0.00 46.52 4.40
5263 6032 6.037830 GTGTAACTTTCAAGTTTCAGGCACTA 59.962 38.462 10.15 0.00 46.52 2.74
5264 6033 5.500645 AACTTTCAAGTTTCAGGCACTAC 57.499 39.130 0.00 0.00 46.52 2.73
5265 6034 3.883489 ACTTTCAAGTTTCAGGCACTACC 59.117 43.478 0.00 0.00 32.91 3.18
5266 6035 2.163818 TCAAGTTTCAGGCACTACCG 57.836 50.000 0.00 0.00 46.52 4.02
5267 6036 1.156736 CAAGTTTCAGGCACTACCGG 58.843 55.000 0.00 0.00 46.52 5.28
5268 6037 1.053424 AAGTTTCAGGCACTACCGGA 58.947 50.000 9.46 0.00 46.52 5.14
5269 6038 0.320697 AGTTTCAGGCACTACCGGAC 59.679 55.000 9.46 0.00 42.92 4.79
5270 6039 0.320697 GTTTCAGGCACTACCGGACT 59.679 55.000 9.46 0.00 42.92 3.85
5271 6040 0.606604 TTTCAGGCACTACCGGACTC 59.393 55.000 9.46 0.00 42.92 3.36
5272 6041 1.592400 TTCAGGCACTACCGGACTCG 61.592 60.000 9.46 0.00 42.92 4.18
5273 6042 3.450115 AGGCACTACCGGACTCGC 61.450 66.667 9.46 5.15 46.52 5.03
5274 6043 4.849329 GGCACTACCGGACTCGCG 62.849 72.222 9.46 0.00 34.56 5.87
5275 6044 4.849329 GCACTACCGGACTCGCGG 62.849 72.222 9.46 0.00 34.56 6.46
5276 6045 3.437795 CACTACCGGACTCGCGGT 61.438 66.667 9.46 9.75 41.78 5.68
5277 6046 3.130160 ACTACCGGACTCGCGGTC 61.130 66.667 9.46 16.40 43.79 4.79
5278 6047 2.823147 CTACCGGACTCGCGGTCT 60.823 66.667 21.54 9.40 43.97 3.85
5279 6048 1.522355 CTACCGGACTCGCGGTCTA 60.522 63.158 21.54 9.91 43.97 2.59
5280 6049 0.883814 CTACCGGACTCGCGGTCTAT 60.884 60.000 21.54 12.76 43.97 1.98
5281 6050 1.162181 TACCGGACTCGCGGTCTATG 61.162 60.000 21.54 14.55 43.97 2.23
5282 6051 2.353607 CGGACTCGCGGTCTATGC 60.354 66.667 21.54 8.79 43.97 3.14
5283 6052 2.027751 GGACTCGCGGTCTATGCC 59.972 66.667 21.54 7.03 43.97 4.40
5284 6053 2.491022 GGACTCGCGGTCTATGCCT 61.491 63.158 21.54 0.00 43.97 4.75
5285 6054 1.170919 GGACTCGCGGTCTATGCCTA 61.171 60.000 21.54 0.00 43.97 3.93
5286 6055 0.040246 GACTCGCGGTCTATGCCTAC 60.040 60.000 17.12 0.00 41.46 3.18
5287 6056 1.082038 CTCGCGGTCTATGCCTACG 60.082 63.158 6.13 0.00 0.00 3.51
5288 6057 2.050351 CGCGGTCTATGCCTACGG 60.050 66.667 0.00 0.00 0.00 4.02
5313 6082 3.217231 CCGACGGCATAGGTCCTT 58.783 61.111 0.00 0.00 0.00 3.36
5314 6083 1.520666 CCGACGGCATAGGTCCTTT 59.479 57.895 0.00 0.00 0.00 3.11
5315 6084 0.810031 CCGACGGCATAGGTCCTTTG 60.810 60.000 0.00 0.00 0.00 2.77
5316 6085 1.429148 CGACGGCATAGGTCCTTTGC 61.429 60.000 22.29 22.29 37.63 3.68
5318 6087 3.827634 GGCATAGGTCCTTTGCCG 58.172 61.111 30.38 3.46 45.36 5.69
5319 6088 1.077716 GGCATAGGTCCTTTGCCGT 60.078 57.895 30.38 0.00 45.36 5.68
5320 6089 1.095807 GGCATAGGTCCTTTGCCGTC 61.096 60.000 30.38 13.61 45.36 4.79
5321 6090 1.429148 GCATAGGTCCTTTGCCGTCG 61.429 60.000 20.40 0.00 33.51 5.12
5322 6091 0.810031 CATAGGTCCTTTGCCGTCGG 60.810 60.000 6.99 6.99 0.00 4.79
5362 6131 3.524606 CCGTCGGCATAGACCCGT 61.525 66.667 0.00 0.00 45.71 5.28
5363 6132 2.025727 CGTCGGCATAGACCCGTC 59.974 66.667 0.00 0.00 45.71 4.79
5364 6133 2.025727 GTCGGCATAGACCCGTCG 59.974 66.667 0.00 0.00 45.71 5.12
5365 6134 3.214123 TCGGCATAGACCCGTCGG 61.214 66.667 3.60 3.60 45.71 4.79
5366 6135 4.944372 CGGCATAGACCCGTCGGC 62.944 72.222 5.50 0.00 40.84 5.54
5367 6136 4.944372 GGCATAGACCCGTCGGCG 62.944 72.222 0.29 0.29 37.95 6.46
5368 6137 4.203076 GCATAGACCCGTCGGCGT 62.203 66.667 9.28 5.34 36.15 5.68
5369 6138 2.837883 GCATAGACCCGTCGGCGTA 61.838 63.158 9.28 0.00 36.15 4.42
5370 6139 1.281960 CATAGACCCGTCGGCGTAG 59.718 63.158 9.28 1.04 36.15 3.51
5371 6140 1.146930 ATAGACCCGTCGGCGTAGA 59.853 57.895 9.28 0.00 36.15 2.59
5372 6141 0.250640 ATAGACCCGTCGGCGTAGAT 60.251 55.000 9.28 0.00 36.15 1.98
5373 6142 0.392706 TAGACCCGTCGGCGTAGATA 59.607 55.000 9.28 0.00 36.15 1.98
5374 6143 0.250640 AGACCCGTCGGCGTAGATAT 60.251 55.000 9.28 0.00 36.15 1.63
5375 6144 0.167689 GACCCGTCGGCGTAGATATC 59.832 60.000 9.28 0.00 36.15 1.63
5376 6145 1.134075 CCCGTCGGCGTAGATATCG 59.866 63.158 9.28 2.11 36.15 2.92
5377 6146 1.572085 CCCGTCGGCGTAGATATCGT 61.572 60.000 9.28 0.00 36.15 3.73
5378 6147 0.179230 CCGTCGGCGTAGATATCGTC 60.179 60.000 9.28 0.00 36.15 4.20
5379 6148 0.509929 CGTCGGCGTAGATATCGTCA 59.490 55.000 6.85 0.00 32.96 4.35
5380 6149 1.462051 CGTCGGCGTAGATATCGTCAG 60.462 57.143 6.85 0.00 32.96 3.51
5381 6150 0.516001 TCGGCGTAGATATCGTCAGC 59.484 55.000 6.85 2.37 32.96 4.26
5382 6151 0.789753 CGGCGTAGATATCGTCAGCG 60.790 60.000 0.00 0.76 39.92 5.18
5383 6152 0.237761 GGCGTAGATATCGTCAGCGT 59.762 55.000 0.00 0.00 39.49 5.07
5384 6153 1.462283 GGCGTAGATATCGTCAGCGTA 59.538 52.381 0.00 0.00 39.49 4.42
5385 6154 2.474196 GGCGTAGATATCGTCAGCGTAG 60.474 54.545 0.00 0.00 39.49 3.51
5386 6155 2.157279 GCGTAGATATCGTCAGCGTAGT 59.843 50.000 0.00 0.00 39.49 2.73
5387 6156 3.721500 GCGTAGATATCGTCAGCGTAGTC 60.722 52.174 0.00 0.00 39.49 2.59
5388 6157 3.674281 CGTAGATATCGTCAGCGTAGTCT 59.326 47.826 0.00 0.00 39.49 3.24
5389 6158 4.150274 CGTAGATATCGTCAGCGTAGTCTT 59.850 45.833 0.00 0.00 39.49 3.01
5390 6159 4.475763 AGATATCGTCAGCGTAGTCTTG 57.524 45.455 0.00 0.00 39.49 3.02
5391 6160 3.878103 AGATATCGTCAGCGTAGTCTTGT 59.122 43.478 0.00 0.00 39.49 3.16
5392 6161 4.335874 AGATATCGTCAGCGTAGTCTTGTT 59.664 41.667 0.00 0.00 39.49 2.83
5393 6162 5.526479 AGATATCGTCAGCGTAGTCTTGTTA 59.474 40.000 0.00 0.00 39.49 2.41
5394 6163 3.466712 TCGTCAGCGTAGTCTTGTTAG 57.533 47.619 0.00 0.00 39.49 2.34
5395 6164 3.069289 TCGTCAGCGTAGTCTTGTTAGA 58.931 45.455 0.00 0.00 39.49 2.10
5396 6165 3.120408 TCGTCAGCGTAGTCTTGTTAGAC 60.120 47.826 0.00 0.00 43.69 2.59
5397 6166 6.145029 TCGTCAGCGTAGTCTTGTTAGACC 62.145 50.000 1.88 0.00 44.02 3.85
5404 6173 1.599992 GTCTTGTTAGACCGTCGACG 58.400 55.000 30.33 30.33 44.15 5.12
5405 6174 1.069636 GTCTTGTTAGACCGTCGACGT 60.070 52.381 33.49 22.45 44.15 4.34
5406 6175 2.157668 GTCTTGTTAGACCGTCGACGTA 59.842 50.000 33.49 18.63 44.15 3.57
5407 6176 2.413112 TCTTGTTAGACCGTCGACGTAG 59.587 50.000 33.49 22.63 37.74 3.51
5408 6177 6.131607 GTCTTGTTAGACCGTCGACGTAGT 62.132 50.000 33.49 25.59 44.83 2.73
5409 6178 6.853398 GTCTTGTTAGACCGTCGACGTAGTA 61.853 48.000 33.49 19.25 43.13 1.82
5410 6179 8.086568 GTCTTGTTAGACCGTCGACGTAGTAT 62.087 46.154 33.49 24.31 43.13 2.12
5411 6180 8.828772 GTCTTGTTAGACCGTCGACGTAGTATA 61.829 44.444 33.49 23.34 43.13 1.47
5420 6189 1.944778 ACGTAGTATAGCCGTCGGC 59.055 57.895 29.07 29.07 46.32 5.54
5430 6199 3.861797 CCGTCGGCATAGGGGCTT 61.862 66.667 0.00 0.00 40.61 4.35
5431 6200 2.504274 CCGTCGGCATAGGGGCTTA 61.504 63.158 0.00 0.00 40.61 3.09
5432 6201 1.671742 CGTCGGCATAGGGGCTTAT 59.328 57.895 0.00 0.00 40.61 1.73
5433 6202 0.670546 CGTCGGCATAGGGGCTTATG 60.671 60.000 0.00 5.54 40.61 1.90
5474 6243 2.601562 GGCATAGTTTAGCCGTCGG 58.398 57.895 6.99 6.99 41.70 4.79
5485 6254 4.914291 CCGTCGGCAGTGTTTTTC 57.086 55.556 0.00 0.00 0.00 2.29
5486 6255 1.281656 CCGTCGGCAGTGTTTTTCC 59.718 57.895 0.00 0.00 0.00 3.13
5487 6256 1.083015 CGTCGGCAGTGTTTTTCCG 60.083 57.895 0.16 0.16 42.96 4.30
5488 6257 1.768112 CGTCGGCAGTGTTTTTCCGT 61.768 55.000 6.11 0.00 42.28 4.69
5489 6258 0.041576 GTCGGCAGTGTTTTTCCGTC 60.042 55.000 6.11 0.00 42.28 4.79
5490 6259 0.179067 TCGGCAGTGTTTTTCCGTCT 60.179 50.000 6.11 0.00 42.28 4.18
5491 6260 0.041312 CGGCAGTGTTTTTCCGTCTG 60.041 55.000 0.00 0.00 37.33 3.51
5492 6261 1.305201 GGCAGTGTTTTTCCGTCTGA 58.695 50.000 0.00 0.00 0.00 3.27
5493 6262 1.002792 GGCAGTGTTTTTCCGTCTGAC 60.003 52.381 0.00 0.00 0.00 3.51
5494 6263 1.332904 GCAGTGTTTTTCCGTCTGACG 60.333 52.381 22.49 22.49 42.11 4.35
5523 6292 3.711842 CGCCGTCAAAAGCGCTGA 61.712 61.111 12.58 0.95 46.50 4.26
5524 6293 2.127232 GCCGTCAAAAGCGCTGAC 60.127 61.111 12.58 14.81 39.89 3.51
5528 6297 2.226269 GTCAAAAGCGCTGACGAGT 58.774 52.632 12.58 0.00 43.93 4.18
5529 6298 0.161870 GTCAAAAGCGCTGACGAGTC 59.838 55.000 12.58 0.00 43.93 3.36
5530 6299 0.249280 TCAAAAGCGCTGACGAGTCA 60.249 50.000 12.58 5.76 43.93 3.41
5531 6300 0.792640 CAAAAGCGCTGACGAGTCAT 59.207 50.000 12.58 0.00 43.93 3.06
5532 6301 0.792640 AAAAGCGCTGACGAGTCATG 59.207 50.000 12.58 4.12 43.93 3.07
5533 6302 1.016130 AAAGCGCTGACGAGTCATGG 61.016 55.000 12.58 3.26 43.93 3.66
5534 6303 2.842394 AAGCGCTGACGAGTCATGGG 62.842 60.000 12.58 9.93 43.93 4.00
5535 6304 2.885113 CGCTGACGAGTCATGGGA 59.115 61.111 6.37 0.00 43.93 4.37
5536 6305 1.215382 CGCTGACGAGTCATGGGAA 59.785 57.895 6.37 0.00 43.93 3.97
5537 6306 0.803768 CGCTGACGAGTCATGGGAAG 60.804 60.000 6.37 0.00 43.93 3.46
5538 6307 1.086634 GCTGACGAGTCATGGGAAGC 61.087 60.000 6.37 2.09 39.13 3.86
5539 6308 0.460987 CTGACGAGTCATGGGAAGCC 60.461 60.000 6.37 0.00 39.13 4.35
5540 6309 1.191489 TGACGAGTCATGGGAAGCCA 61.191 55.000 1.24 0.00 34.14 4.75
5541 6310 0.741221 GACGAGTCATGGGAAGCCAC 60.741 60.000 0.00 0.00 0.00 5.01
5542 6311 1.811266 CGAGTCATGGGAAGCCACG 60.811 63.158 0.00 0.00 0.00 4.94
5543 6312 1.296715 GAGTCATGGGAAGCCACGT 59.703 57.895 0.00 0.00 0.00 4.49
5544 6313 1.003355 AGTCATGGGAAGCCACGTG 60.003 57.895 9.08 9.08 0.00 4.49
5545 6314 2.040544 GTCATGGGAAGCCACGTGG 61.041 63.158 30.66 30.66 38.53 4.94
5546 6315 2.034066 CATGGGAAGCCACGTGGT 59.966 61.111 33.92 17.27 37.57 4.16
5547 6316 1.195442 TCATGGGAAGCCACGTGGTA 61.195 55.000 33.92 14.87 37.57 3.25
5548 6317 0.744414 CATGGGAAGCCACGTGGTAG 60.744 60.000 33.92 11.21 37.57 3.18
5549 6318 0.907704 ATGGGAAGCCACGTGGTAGA 60.908 55.000 33.92 13.86 37.57 2.59
5550 6319 1.218316 GGGAAGCCACGTGGTAGAG 59.782 63.158 33.92 10.43 37.57 2.43
5551 6320 1.218316 GGAAGCCACGTGGTAGAGG 59.782 63.158 33.92 9.85 37.57 3.69
5552 6321 1.542187 GGAAGCCACGTGGTAGAGGT 61.542 60.000 33.92 11.94 37.57 3.85
5553 6322 1.180029 GAAGCCACGTGGTAGAGGTA 58.820 55.000 33.92 0.00 37.57 3.08
5554 6323 0.893447 AAGCCACGTGGTAGAGGTAC 59.107 55.000 33.92 15.76 37.57 3.34
5555 6324 1.138247 GCCACGTGGTAGAGGTACG 59.862 63.158 33.92 6.60 42.98 3.67
5556 6325 1.138247 CCACGTGGTAGAGGTACGC 59.862 63.158 26.95 0.00 41.19 4.42
5557 6326 1.138247 CACGTGGTAGAGGTACGCC 59.862 63.158 7.95 0.00 41.19 5.68
5558 6327 2.401766 ACGTGGTAGAGGTACGCCG 61.402 63.158 0.00 0.00 41.19 6.46
5559 6328 2.108514 CGTGGTAGAGGTACGCCGA 61.109 63.158 0.00 0.00 40.50 5.54
5560 6329 1.431036 GTGGTAGAGGTACGCCGAC 59.569 63.158 0.00 0.00 40.50 4.79
5562 6331 2.711924 GTAGAGGTACGCCGACGG 59.288 66.667 10.29 10.29 46.04 4.79
5563 6332 3.204827 TAGAGGTACGCCGACGGC 61.205 66.667 29.10 29.10 46.75 5.68
5587 6356 2.814280 CCGTCGGCATAGGTAGAAAT 57.186 50.000 0.00 0.00 0.00 2.17
5588 6357 2.673833 CCGTCGGCATAGGTAGAAATC 58.326 52.381 0.00 0.00 0.00 2.17
5589 6358 2.296471 CCGTCGGCATAGGTAGAAATCT 59.704 50.000 0.00 0.00 0.00 2.40
5590 6359 3.504906 CCGTCGGCATAGGTAGAAATCTA 59.495 47.826 0.00 0.00 0.00 1.98
5591 6360 4.158025 CCGTCGGCATAGGTAGAAATCTAT 59.842 45.833 0.00 0.00 0.00 1.98
5592 6361 5.096169 CGTCGGCATAGGTAGAAATCTATG 58.904 45.833 0.00 0.00 43.26 2.23
5597 6366 2.841442 AGGTAGAAATCTATGCCGGC 57.159 50.000 22.73 22.73 0.00 6.13
5598 6367 1.000955 AGGTAGAAATCTATGCCGGCG 59.999 52.381 23.90 7.87 0.00 6.46
5599 6368 1.429463 GTAGAAATCTATGCCGGCGG 58.571 55.000 24.35 24.35 0.00 6.13
5628 6397 2.809601 GCGTACCTCTGCCACGTG 60.810 66.667 9.08 9.08 37.95 4.49
5629 6398 2.126071 CGTACCTCTGCCACGTGG 60.126 66.667 30.66 30.66 38.53 4.94
5644 6413 4.980805 TGGCGTTCCGTGGTGCTC 62.981 66.667 0.00 0.00 34.14 4.26
5646 6415 4.681978 GCGTTCCGTGGTGCTCCT 62.682 66.667 6.34 0.00 34.23 3.69
5647 6416 2.738521 CGTTCCGTGGTGCTCCTG 60.739 66.667 6.34 0.00 34.23 3.86
5648 6417 2.358737 GTTCCGTGGTGCTCCTGG 60.359 66.667 6.34 8.21 34.23 4.45
5649 6418 2.847234 TTCCGTGGTGCTCCTGGT 60.847 61.111 6.34 0.00 33.66 4.00
5650 6419 3.177194 TTCCGTGGTGCTCCTGGTG 62.177 63.158 6.34 0.00 33.66 4.17
5651 6420 4.704833 CCGTGGTGCTCCTGGTGG 62.705 72.222 6.34 0.00 34.23 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.650754 ACTTTATAGCCAGTAGTGGTCG 57.349 45.455 18.02 2.26 46.96 4.79
17 18 6.053650 CCCCTACCACTACAAACTTTATAGC 58.946 44.000 0.00 0.00 0.00 2.97
19 20 7.125659 GGTACCCCTACCACTACAAACTTTATA 59.874 40.741 0.00 0.00 42.16 0.98
27 28 1.619432 CCGGTACCCCTACCACTACAA 60.619 57.143 6.25 0.00 42.66 2.41
28 29 0.033208 CCGGTACCCCTACCACTACA 60.033 60.000 6.25 0.00 42.66 2.74
29 30 0.033109 ACCGGTACCCCTACCACTAC 60.033 60.000 4.49 0.00 42.66 2.73
39 40 1.685517 GGAAGATCTGTACCGGTACCC 59.314 57.143 35.71 25.12 35.26 3.69
44 45 2.039418 TCCATGGAAGATCTGTACCGG 58.961 52.381 13.46 0.00 0.00 5.28
45 46 3.612717 CGATCCATGGAAGATCTGTACCG 60.613 52.174 20.67 5.91 38.39 4.02
127 131 1.315257 GGGGCTGCACAACCACTATG 61.315 60.000 3.46 0.00 0.00 2.23
128 132 1.000896 GGGGCTGCACAACCACTAT 60.001 57.895 3.46 0.00 0.00 2.12
129 133 1.788518 ATGGGGCTGCACAACCACTA 61.789 55.000 3.46 0.00 35.52 2.74
131 135 2.601367 ATGGGGCTGCACAACCAC 60.601 61.111 3.46 0.00 35.52 4.16
132 136 2.601067 CATGGGGCTGCACAACCA 60.601 61.111 3.46 5.63 37.41 3.67
133 137 4.073200 GCATGGGGCTGCACAACC 62.073 66.667 3.46 0.00 41.87 3.77
205 445 3.444703 ACTGATGCTCTCGGATTGTAC 57.555 47.619 3.13 0.00 34.09 2.90
206 446 3.181475 GGAACTGATGCTCTCGGATTGTA 60.181 47.826 3.13 0.00 34.09 2.41
207 447 2.419297 GGAACTGATGCTCTCGGATTGT 60.419 50.000 3.13 0.00 34.09 2.71
208 448 2.208431 GGAACTGATGCTCTCGGATTG 58.792 52.381 3.13 0.00 34.09 2.67
209 449 1.202463 CGGAACTGATGCTCTCGGATT 60.202 52.381 3.13 0.00 34.09 3.01
213 453 1.140589 AGCGGAACTGATGCTCTCG 59.859 57.895 0.00 0.00 32.44 4.04
295 535 0.317160 TGACCAGCACGTAGTCCTTG 59.683 55.000 0.00 0.00 41.61 3.61
367 607 2.953466 ATTGGAACATCTGCATGCAC 57.047 45.000 18.46 5.65 39.30 4.57
393 633 8.251026 CAGCGAGATGGTACTATATTTGGATTA 58.749 37.037 0.00 0.00 0.00 1.75
394 634 7.039011 TCAGCGAGATGGTACTATATTTGGATT 60.039 37.037 0.00 0.00 0.00 3.01
396 636 5.773176 TCAGCGAGATGGTACTATATTTGGA 59.227 40.000 0.00 0.00 0.00 3.53
397 637 6.025749 TCAGCGAGATGGTACTATATTTGG 57.974 41.667 0.00 0.00 0.00 3.28
411 651 0.745845 GGCAACCACATCAGCGAGAT 60.746 55.000 0.00 0.00 37.48 2.75
412 652 1.375908 GGCAACCACATCAGCGAGA 60.376 57.895 0.00 0.00 0.00 4.04
413 653 2.743752 CGGCAACCACATCAGCGAG 61.744 63.158 0.00 0.00 0.00 5.03
414 654 2.741985 CGGCAACCACATCAGCGA 60.742 61.111 0.00 0.00 0.00 4.93
415 655 4.465512 GCGGCAACCACATCAGCG 62.466 66.667 0.00 0.00 0.00 5.18
416 656 4.465512 CGCGGCAACCACATCAGC 62.466 66.667 0.00 0.00 0.00 4.26
417 657 2.741985 TCGCGGCAACCACATCAG 60.742 61.111 6.13 0.00 0.00 2.90
462 708 2.069273 CAGCGTGAGTGTTAGGGAAAG 58.931 52.381 0.00 0.00 0.00 2.62
468 714 1.002366 GATGGCAGCGTGAGTGTTAG 58.998 55.000 0.00 0.00 0.00 2.34
510 756 5.575606 ACTGTGCGTTATTACTGTATGTGAC 59.424 40.000 0.00 0.00 0.00 3.67
569 820 2.296190 AGGCCCAAATTGAAACTTCGAC 59.704 45.455 0.00 0.00 0.00 4.20
579 830 2.422127 ACGTCGATTTAGGCCCAAATTG 59.578 45.455 15.65 15.65 32.61 2.32
632 884 2.391724 CTGTACCACCGCCACCAACT 62.392 60.000 0.00 0.00 0.00 3.16
633 885 1.964373 CTGTACCACCGCCACCAAC 60.964 63.158 0.00 0.00 0.00 3.77
635 887 2.524640 TCTGTACCACCGCCACCA 60.525 61.111 0.00 0.00 0.00 4.17
637 889 2.047560 GGTCTGTACCACCGCCAC 60.048 66.667 0.00 0.00 45.98 5.01
663 920 3.420222 CTACACCAATGCGCGCGAC 62.420 63.158 37.18 24.92 0.00 5.19
723 984 0.620556 TTCCTGGTTCTCATGGCTCC 59.379 55.000 0.00 0.00 0.00 4.70
733 1026 5.658468 AGTACGTAATAAGCTTCCTGGTTC 58.342 41.667 0.00 0.00 37.56 3.62
755 1048 3.316308 AGGCGGTAACAGTAATACGGTAG 59.684 47.826 0.00 0.00 0.00 3.18
756 1049 3.287222 AGGCGGTAACAGTAATACGGTA 58.713 45.455 0.00 0.00 0.00 4.02
757 1050 2.102578 AGGCGGTAACAGTAATACGGT 58.897 47.619 0.00 0.00 0.00 4.83
758 1051 2.877043 AGGCGGTAACAGTAATACGG 57.123 50.000 0.00 0.00 0.00 4.02
852 1145 1.559065 TAGGGCCGGAAAGGGAAGTG 61.559 60.000 5.05 0.00 41.48 3.16
976 1269 1.946768 TGCTGTCACTTTTACACTGCC 59.053 47.619 0.00 0.00 34.92 4.85
1119 1418 2.267961 CCCTTGACGGTGTAGCCC 59.732 66.667 0.00 0.00 0.00 5.19
1168 1467 7.330946 TCGTTGGTTACTATGAACTTGAATCTG 59.669 37.037 0.00 0.00 0.00 2.90
1190 1489 1.508632 AGCAACGCAGTAATGTCGTT 58.491 45.000 15.85 15.85 45.00 3.85
1206 1513 2.863132 TTTAGCCCCGAAGTTAAGCA 57.137 45.000 0.00 0.00 0.00 3.91
1225 1532 1.789751 CAGCATCACGCACGTCAAT 59.210 52.632 0.00 0.00 46.13 2.57
1227 1534 3.413861 GCAGCATCACGCACGTCA 61.414 61.111 0.00 0.00 46.13 4.35
1228 1535 3.358667 CTGCAGCATCACGCACGTC 62.359 63.158 0.00 0.00 46.13 4.34
1419 1731 1.841663 CGCAACGAACAAGGACAGGG 61.842 60.000 0.00 0.00 0.00 4.45
1448 1760 1.193426 GTGAGCAACTGAAGCGAAGAC 59.807 52.381 0.00 0.00 37.01 3.01
1450 1762 0.162507 CGTGAGCAACTGAAGCGAAG 59.837 55.000 0.00 0.00 37.01 3.79
1490 1802 1.067283 CATCTGCTCCTGTTCAGACGT 60.067 52.381 1.00 0.00 41.53 4.34
1754 2081 7.607250 ACTAACGAAGACTTCTGAAGATTCAT 58.393 34.615 23.36 17.20 36.46 2.57
1795 2122 2.220653 TGGAAGGGATTTTCTGCCTG 57.779 50.000 0.00 0.00 46.73 4.85
1820 2147 5.301805 ACCCATTAATTTTCTGCCTATTCGG 59.698 40.000 0.00 0.00 0.00 4.30
1821 2148 6.391227 ACCCATTAATTTTCTGCCTATTCG 57.609 37.500 0.00 0.00 0.00 3.34
1850 2177 1.012086 CGATCACAAGAGGGCATGTG 58.988 55.000 0.00 0.00 46.44 3.21
1851 2178 0.904649 TCGATCACAAGAGGGCATGT 59.095 50.000 0.00 0.00 0.00 3.21
1871 2198 7.725251 ACAATTAATCATGTCCTGTTTGTGTT 58.275 30.769 0.00 0.00 0.00 3.32
1902 2232 0.314618 TTCGCTTGTGCATGCAACAT 59.685 45.000 24.58 0.00 39.64 2.71
1941 2271 7.778470 TTGTTGTTGTTGTTGAGAAAACTTT 57.222 28.000 0.00 0.00 0.00 2.66
1990 2320 3.874543 CACACGTAGGGCATAGCATTTTA 59.125 43.478 0.00 0.00 0.00 1.52
2007 2337 2.413112 AGCAATTTCTCATCGACACACG 59.587 45.455 0.00 0.00 44.09 4.49
2061 2457 0.990374 AGCATGCCAGAAGAGGACTT 59.010 50.000 15.66 0.00 39.24 3.01
2064 2460 3.939740 ATTTAGCATGCCAGAAGAGGA 57.060 42.857 15.66 0.00 0.00 3.71
2101 2497 4.387862 AGTGTACTTACTGTTTATGCGTGC 59.612 41.667 0.00 0.00 0.00 5.34
2126 2522 2.003443 CGCGTTCACCAAAACTGCG 61.003 57.895 0.00 9.95 41.63 5.18
2127 2523 1.063488 ACGCGTTCACCAAAACTGC 59.937 52.632 5.58 0.00 0.00 4.40
2131 2527 1.226435 GCACACGCGTTCACCAAAA 60.226 52.632 10.22 0.00 0.00 2.44
2166 2563 2.254546 ATGTTTGTGTGAGCTTCCGA 57.745 45.000 0.00 0.00 0.00 4.55
2175 2572 2.200792 TGTTGCCGAATGTTTGTGTG 57.799 45.000 0.00 0.00 0.00 3.82
2176 2573 2.604373 CGATGTTGCCGAATGTTTGTGT 60.604 45.455 0.00 0.00 0.00 3.72
2177 2574 1.978097 CGATGTTGCCGAATGTTTGTG 59.022 47.619 0.00 0.00 0.00 3.33
2178 2575 1.606668 ACGATGTTGCCGAATGTTTGT 59.393 42.857 0.00 0.00 0.00 2.83
2194 2591 0.320334 TGTGCGACATGGTGAACGAT 60.320 50.000 0.00 0.00 0.00 3.73
2202 2599 1.664649 ACGTGAGTGTGCGACATGG 60.665 57.895 0.00 0.00 46.97 3.66
2227 2624 2.443887 TTCCGTACGTTGGAGGAAAG 57.556 50.000 15.21 0.00 39.53 2.62
2248 2645 4.736896 ACGACGCTCCGCTTTCCC 62.737 66.667 0.00 0.00 0.00 3.97
2316 2713 2.789893 GTGATACGTCTTCGCTTGATCC 59.210 50.000 0.00 0.00 41.18 3.36
2324 2721 3.036633 CGAATCCTGTGATACGTCTTCG 58.963 50.000 0.00 0.00 43.34 3.79
2338 2735 4.020218 TGAACAAGATTGACTCCGAATCCT 60.020 41.667 0.00 0.00 31.22 3.24
2339 2736 4.093556 GTGAACAAGATTGACTCCGAATCC 59.906 45.833 0.00 0.00 31.22 3.01
2346 2751 2.158449 CAGCCGTGAACAAGATTGACTC 59.842 50.000 0.00 0.00 0.00 3.36
2354 2759 0.592637 TTGCATCAGCCGTGAACAAG 59.407 50.000 0.00 0.00 41.13 3.16
2362 2767 2.096565 CGATAATGACTTGCATCAGCCG 60.097 50.000 0.00 0.00 41.13 5.52
2365 2770 4.044426 TCGTCGATAATGACTTGCATCAG 58.956 43.478 0.00 0.00 35.78 2.90
2392 2801 6.950041 CACCATTATGGGAGGAATGTAATGAT 59.050 38.462 16.35 0.00 43.37 2.45
2393 2802 6.126215 ACACCATTATGGGAGGAATGTAATGA 60.126 38.462 16.35 0.00 43.37 2.57
2414 2827 1.537202 CAAAGAGGCTTGTGCTACACC 59.463 52.381 0.00 0.00 39.59 4.16
2450 2863 2.079925 CCTACTTGCACAGAGGCTTTC 58.920 52.381 0.00 0.00 34.04 2.62
2474 2887 4.045104 CCTGATTTTCTAGTCGACATCCG 58.955 47.826 19.50 7.00 40.25 4.18
2495 2908 0.243636 CCGTGGTGAATGCTTTTCCC 59.756 55.000 0.00 0.00 0.00 3.97
2519 2932 4.858200 CGACAGCGCGCATCTTGC 62.858 66.667 35.10 16.45 40.69 4.01
2549 2962 0.872021 GGCGCTGACGTCATCCTTAG 60.872 60.000 20.40 7.31 45.32 2.18
2609 3033 1.736032 CGTAGCAGTACCAGTTCTGGC 60.736 57.143 17.55 4.62 32.94 4.85
2993 3417 4.386230 CAAGAAATGTTGCGAGAACGTAG 58.614 43.478 0.00 0.00 41.98 3.51
2995 3419 2.602217 GCAAGAAATGTTGCGAGAACGT 60.602 45.455 0.00 0.00 43.24 3.99
3052 3480 8.558973 AGTAAATCCTCTGAAGTGAGATTTTG 57.441 34.615 0.00 0.00 36.23 2.44
3053 3481 9.007901 CAAGTAAATCCTCTGAAGTGAGATTTT 57.992 33.333 0.00 0.00 36.23 1.82
3054 3482 7.120432 GCAAGTAAATCCTCTGAAGTGAGATTT 59.880 37.037 0.00 0.00 36.23 2.17
3066 3681 6.127196 CCTCAAGTAGAGCAAGTAAATCCTCT 60.127 42.308 0.00 0.00 43.31 3.69
3078 3693 6.374417 AACCTTAAATCCTCAAGTAGAGCA 57.626 37.500 0.00 0.00 43.31 4.26
3096 3711 6.722590 CACCCCTACTAACCAAATTAAACCTT 59.277 38.462 0.00 0.00 0.00 3.50
3116 3733 3.197983 ACTCATCAAGTTACTAGCACCCC 59.802 47.826 0.00 0.00 33.03 4.95
3121 3738 4.130286 AGGCACTCATCAAGTTACTAGC 57.870 45.455 0.00 0.00 35.45 3.42
3141 3758 9.727627 GCACTAAATAAGATTTCCAAATCAGAG 57.272 33.333 13.30 2.70 45.59 3.35
3215 3833 0.804156 GTAAGCCGCTCTGCACTCTC 60.804 60.000 0.00 0.00 0.00 3.20
3302 3920 1.981495 AGTGCAAGAAAGCCTAGGTCT 59.019 47.619 11.31 5.22 0.00 3.85
3303 3921 2.481289 AGTGCAAGAAAGCCTAGGTC 57.519 50.000 11.31 2.66 0.00 3.85
3304 3922 2.959465 AAGTGCAAGAAAGCCTAGGT 57.041 45.000 11.31 0.00 0.00 3.08
3428 4047 1.882912 TATTATCTTGCCTGCCAGCG 58.117 50.000 0.00 0.00 34.65 5.18
3444 4063 3.255642 GGGTTTGTGTCAGTGTGCATATT 59.744 43.478 0.00 0.00 0.00 1.28
3446 4065 2.158682 AGGGTTTGTGTCAGTGTGCATA 60.159 45.455 0.00 0.00 0.00 3.14
3447 4066 1.032014 GGGTTTGTGTCAGTGTGCAT 58.968 50.000 0.00 0.00 0.00 3.96
3448 4067 0.034574 AGGGTTTGTGTCAGTGTGCA 60.035 50.000 0.00 0.00 0.00 4.57
3449 4068 1.065551 GAAGGGTTTGTGTCAGTGTGC 59.934 52.381 0.00 0.00 0.00 4.57
3450 4069 2.355756 CTGAAGGGTTTGTGTCAGTGTG 59.644 50.000 0.00 0.00 34.15 3.82
3451 4070 2.026262 ACTGAAGGGTTTGTGTCAGTGT 60.026 45.455 4.45 0.00 46.80 3.55
3452 4071 2.643551 ACTGAAGGGTTTGTGTCAGTG 58.356 47.619 4.45 0.00 46.80 3.66
3454 4073 4.032703 CAAACTGAAGGGTTTGTGTCAG 57.967 45.455 10.69 0.00 46.17 3.51
3466 4085 5.864474 AGCTTACGTACTGATCAAACTGAAG 59.136 40.000 0.00 5.77 0.00 3.02
3630 4327 0.179020 CAGGCTCACACTCCACCAAA 60.179 55.000 0.00 0.00 0.00 3.28
3639 4336 1.680338 ACCACTTTTCAGGCTCACAC 58.320 50.000 0.00 0.00 0.00 3.82
3640 4337 2.438021 ACTACCACTTTTCAGGCTCACA 59.562 45.455 0.00 0.00 0.00 3.58
3712 4409 9.625747 TTGCCAATCATTGAGTAGACAAATATA 57.374 29.630 0.00 0.00 33.44 0.86
3723 4420 6.125029 AGTAAGCTATTGCCAATCATTGAGT 58.875 36.000 0.00 0.00 40.80 3.41
3760 4457 7.973388 TGTAATTAATTTGATCGCTCCAAAAGG 59.027 33.333 5.91 0.00 37.11 3.11
3770 4467 7.379529 GGCCATGAAGTGTAATTAATTTGATCG 59.620 37.037 5.91 0.00 0.00 3.69
3773 4470 7.716799 AGGCCATGAAGTGTAATTAATTTGA 57.283 32.000 5.01 0.00 0.00 2.69
3856 4555 9.368674 TGCACAATTTTTAATATGATCACTTGG 57.631 29.630 0.00 0.00 0.00 3.61
3871 4570 6.940831 ATTTAGCCAAAGTGCACAATTTTT 57.059 29.167 21.04 7.83 0.00 1.94
3955 4655 9.550811 CTACGTGATTTGGTTCCTATTTTAAAC 57.449 33.333 0.00 0.00 0.00 2.01
4053 4753 1.735386 CATGCTGCTGAGCTTACTGT 58.265 50.000 5.83 0.00 46.39 3.55
4073 4773 1.417517 TGGCCCATATGACTGCACTAG 59.582 52.381 3.65 0.00 0.00 2.57
4105 4810 6.803154 ACAGTTAGTTCTGATTTGCTTACC 57.197 37.500 0.65 0.00 38.63 2.85
4118 4823 3.621268 TCACACAGCACAACAGTTAGTTC 59.379 43.478 0.00 0.00 38.74 3.01
4161 4866 5.955959 TGCTCACTAGATCAAAGGTAAGGTA 59.044 40.000 0.00 0.00 0.00 3.08
4162 4867 4.777896 TGCTCACTAGATCAAAGGTAAGGT 59.222 41.667 0.00 0.00 0.00 3.50
4163 4868 5.105146 ACTGCTCACTAGATCAAAGGTAAGG 60.105 44.000 0.00 0.00 0.00 2.69
4164 4869 5.809562 CACTGCTCACTAGATCAAAGGTAAG 59.190 44.000 0.00 0.00 0.00 2.34
4165 4870 5.480422 TCACTGCTCACTAGATCAAAGGTAA 59.520 40.000 0.00 0.00 0.00 2.85
4203 4908 3.230976 ACAGTCACTACTCACCACATCA 58.769 45.455 0.00 0.00 31.97 3.07
4231 4936 1.060729 TTCTCCACCATCCGTTCCAA 58.939 50.000 0.00 0.00 0.00 3.53
4257 4962 0.108804 CGGTGGCACTACAGACGAAT 60.109 55.000 18.45 0.00 0.00 3.34
4358 5085 6.522054 TGCTCTTATATTTCTTTACGGAGGG 58.478 40.000 0.00 0.00 0.00 4.30
4403 5130 1.093972 CCGCATACACCAAAGATGCA 58.906 50.000 6.86 0.00 45.04 3.96
4442 5169 0.820891 AGCACCTGAGCACAACCTTG 60.821 55.000 0.00 0.00 36.85 3.61
4443 5170 0.536006 GAGCACCTGAGCACAACCTT 60.536 55.000 0.00 0.00 36.85 3.50
4444 5171 1.072159 GAGCACCTGAGCACAACCT 59.928 57.895 0.00 0.00 36.85 3.50
4445 5172 1.072159 AGAGCACCTGAGCACAACC 59.928 57.895 0.00 0.00 36.85 3.77
4446 5173 0.250038 TCAGAGCACCTGAGCACAAC 60.250 55.000 4.92 0.00 46.38 3.32
4447 5174 2.135890 TCAGAGCACCTGAGCACAA 58.864 52.632 4.92 0.00 46.38 3.33
4520 5249 1.303643 GGTGAACTGGAGGCCAAGG 60.304 63.158 5.01 0.00 30.80 3.61
4553 5282 1.130749 CTCTTCACCGTCTCGTACAGG 59.869 57.143 0.00 0.00 0.00 4.00
4614 5343 0.400237 AGCTCTGCTGGGAGGATGAT 60.400 55.000 0.00 0.00 37.57 2.45
4615 5344 1.002662 AGCTCTGCTGGGAGGATGA 59.997 57.895 0.00 0.00 37.57 2.92
4616 5345 3.644719 AGCTCTGCTGGGAGGATG 58.355 61.111 0.00 0.00 37.57 3.51
4646 5375 0.955428 TTCTTCAGCACCATCACGCC 60.955 55.000 0.00 0.00 0.00 5.68
4706 5435 6.233905 TGTATACACAAGCAGACCACATAT 57.766 37.500 0.08 0.00 0.00 1.78
4754 5483 6.478673 CGATACATTACATTGCTTAGTCCACA 59.521 38.462 0.00 0.00 0.00 4.17
4834 5567 0.251519 AAAGAAGGGAAGGCTGGCAG 60.252 55.000 10.94 10.94 0.00 4.85
4842 5575 5.751990 GCATTGCATCAATAAAGAAGGGAAG 59.248 40.000 3.15 0.00 32.35 3.46
4845 5578 5.013568 TGCATTGCATCAATAAAGAAGGG 57.986 39.130 7.38 0.00 32.35 3.95
4988 5721 0.037447 GGAGAAGGTCCTGCAAGCTT 59.963 55.000 0.00 2.56 42.99 3.74
4989 5722 1.682257 GGAGAAGGTCCTGCAAGCT 59.318 57.895 0.00 0.00 42.99 3.74
4998 5731 7.179338 ACCATGTATCTATATGTGGAGAAGGTC 59.821 40.741 9.35 0.00 0.00 3.85
5021 5754 7.925043 TGAACACTTAACACTCTTTTTACCA 57.075 32.000 0.00 0.00 0.00 3.25
5029 5762 7.173390 GGCTATTTCTTGAACACTTAACACTCT 59.827 37.037 0.00 0.00 0.00 3.24
5030 5763 7.173390 AGGCTATTTCTTGAACACTTAACACTC 59.827 37.037 0.00 0.00 0.00 3.51
5032 5765 7.203255 AGGCTATTTCTTGAACACTTAACAC 57.797 36.000 0.00 0.00 0.00 3.32
5033 5766 7.817418 AAGGCTATTTCTTGAACACTTAACA 57.183 32.000 0.00 0.00 0.00 2.41
5034 5767 8.968242 CAAAAGGCTATTTCTTGAACACTTAAC 58.032 33.333 0.00 0.00 0.00 2.01
5035 5768 7.651704 GCAAAAGGCTATTTCTTGAACACTTAA 59.348 33.333 0.00 0.00 40.25 1.85
5058 5791 3.329520 ACCTACCACTATTGTTCTGGCAA 59.670 43.478 0.00 0.00 0.00 4.52
5065 5798 6.446451 TCATACCCTACCTACCACTATTGTT 58.554 40.000 0.00 0.00 0.00 2.83
5072 5805 4.737578 TCTCATCATACCCTACCTACCAC 58.262 47.826 0.00 0.00 0.00 4.16
5080 5813 4.569676 TCCCCTTTCTCATCATACCCTA 57.430 45.455 0.00 0.00 0.00 3.53
5081 5814 3.438131 TCCCCTTTCTCATCATACCCT 57.562 47.619 0.00 0.00 0.00 4.34
5082 5815 4.019231 GGTATCCCCTTTCTCATCATACCC 60.019 50.000 0.00 0.00 31.69 3.69
5083 5816 4.597507 TGGTATCCCCTTTCTCATCATACC 59.402 45.833 0.00 0.00 36.38 2.73
5085 5818 5.726560 TCTGGTATCCCCTTTCTCATCATA 58.273 41.667 0.00 0.00 0.00 2.15
5086 5819 4.570926 TCTGGTATCCCCTTTCTCATCAT 58.429 43.478 0.00 0.00 0.00 2.45
5087 5820 3.969976 CTCTGGTATCCCCTTTCTCATCA 59.030 47.826 0.00 0.00 0.00 3.07
5088 5821 4.227197 TCTCTGGTATCCCCTTTCTCATC 58.773 47.826 0.00 0.00 0.00 2.92
5089 5822 4.286813 TCTCTGGTATCCCCTTTCTCAT 57.713 45.455 0.00 0.00 0.00 2.90
5090 5823 3.775316 GTTCTCTGGTATCCCCTTTCTCA 59.225 47.826 0.00 0.00 0.00 3.27
5106 5874 2.462456 TGCTTTCGCTCATGTTCTCT 57.538 45.000 0.00 0.00 36.97 3.10
5183 5951 4.985409 CCTTACCTAAGATAGCTTTCTGCG 59.015 45.833 7.50 2.26 40.13 5.18
5225 5993 5.712917 TGAAAGTTACACCAAGACACCTTTT 59.287 36.000 0.00 0.00 0.00 2.27
5258 6027 4.849329 CCGCGAGTCCGGTAGTGC 62.849 72.222 8.23 0.96 43.24 4.40
5267 6036 0.040246 GTAGGCATAGACCGCGAGTC 60.040 60.000 8.23 13.88 46.71 3.36
5268 6037 1.783031 CGTAGGCATAGACCGCGAGT 61.783 60.000 8.23 3.14 35.83 4.18
5269 6038 1.082038 CGTAGGCATAGACCGCGAG 60.082 63.158 8.23 0.00 35.83 5.03
5270 6039 2.549198 CCGTAGGCATAGACCGCGA 61.549 63.158 8.23 0.00 46.14 5.87
5271 6040 2.050351 CCGTAGGCATAGACCGCG 60.050 66.667 0.00 0.00 46.14 6.46
5296 6065 0.810031 CAAAGGACCTATGCCGTCGG 60.810 60.000 6.99 6.99 0.00 4.79
5297 6066 1.429148 GCAAAGGACCTATGCCGTCG 61.429 60.000 0.00 0.00 34.03 5.12
5298 6067 2.394604 GCAAAGGACCTATGCCGTC 58.605 57.895 0.00 0.00 34.03 4.79
5299 6068 4.637771 GCAAAGGACCTATGCCGT 57.362 55.556 0.00 0.00 34.03 5.68
5302 6071 1.429148 CGACGGCAAAGGACCTATGC 61.429 60.000 0.00 0.00 39.33 3.14
5303 6072 0.810031 CCGACGGCAAAGGACCTATG 60.810 60.000 0.00 0.00 0.00 2.23
5304 6073 1.520666 CCGACGGCAAAGGACCTAT 59.479 57.895 0.00 0.00 0.00 2.57
5305 6074 2.975536 CCGACGGCAAAGGACCTA 59.024 61.111 0.00 0.00 0.00 3.08
5345 6114 3.480225 GACGGGTCTATGCCGACGG 62.480 68.421 10.29 10.29 34.75 4.79
5346 6115 2.025727 GACGGGTCTATGCCGACG 59.974 66.667 0.00 0.00 34.75 5.12
5347 6116 2.025727 CGACGGGTCTATGCCGAC 59.974 66.667 0.00 0.00 0.00 4.79
5348 6117 3.214123 CCGACGGGTCTATGCCGA 61.214 66.667 5.81 0.00 0.00 5.54
5349 6118 4.944372 GCCGACGGGTCTATGCCG 62.944 72.222 17.22 0.00 34.97 5.69
5350 6119 4.944372 CGCCGACGGGTCTATGCC 62.944 72.222 17.22 0.00 34.97 4.40
5351 6120 2.728427 CTACGCCGACGGGTCTATGC 62.728 65.000 17.22 0.00 46.04 3.14
5352 6121 1.162181 TCTACGCCGACGGGTCTATG 61.162 60.000 17.22 4.26 46.04 2.23
5353 6122 0.250640 ATCTACGCCGACGGGTCTAT 60.251 55.000 17.22 6.39 46.04 1.98
5354 6123 0.392706 TATCTACGCCGACGGGTCTA 59.607 55.000 17.22 4.38 46.04 2.59
5355 6124 0.250640 ATATCTACGCCGACGGGTCT 60.251 55.000 17.22 3.74 46.04 3.85
5356 6125 0.167689 GATATCTACGCCGACGGGTC 59.832 60.000 17.22 0.00 46.04 4.46
5357 6126 1.572085 CGATATCTACGCCGACGGGT 61.572 60.000 17.22 14.07 46.04 5.28
5358 6127 1.134075 CGATATCTACGCCGACGGG 59.866 63.158 17.22 8.43 46.04 5.28
5359 6128 0.179230 GACGATATCTACGCCGACGG 60.179 60.000 10.29 10.29 46.04 4.79
5361 6130 1.725292 GCTGACGATATCTACGCCGAC 60.725 57.143 0.34 0.00 0.00 4.79
5362 6131 0.516001 GCTGACGATATCTACGCCGA 59.484 55.000 0.34 0.00 0.00 5.54
5363 6132 0.789753 CGCTGACGATATCTACGCCG 60.790 60.000 0.34 0.00 43.93 6.46
5364 6133 0.237761 ACGCTGACGATATCTACGCC 59.762 55.000 0.34 0.00 43.93 5.68
5365 6134 2.157279 ACTACGCTGACGATATCTACGC 59.843 50.000 0.34 0.00 43.93 4.42
5366 6135 3.674281 AGACTACGCTGACGATATCTACG 59.326 47.826 0.34 0.29 43.93 3.51
5367 6136 5.050227 ACAAGACTACGCTGACGATATCTAC 60.050 44.000 0.34 0.00 43.93 2.59
5368 6137 5.055144 ACAAGACTACGCTGACGATATCTA 58.945 41.667 0.34 0.00 43.93 1.98
5369 6138 3.878103 ACAAGACTACGCTGACGATATCT 59.122 43.478 0.34 0.00 43.93 1.98
5370 6139 4.212213 ACAAGACTACGCTGACGATATC 57.788 45.455 0.00 0.00 43.93 1.63
5371 6140 4.634184 AACAAGACTACGCTGACGATAT 57.366 40.909 0.00 0.00 43.93 1.63
5372 6141 4.872124 TCTAACAAGACTACGCTGACGATA 59.128 41.667 0.00 0.00 43.93 2.92
5373 6142 3.688185 TCTAACAAGACTACGCTGACGAT 59.312 43.478 0.00 0.00 43.93 3.73
5374 6143 3.069289 TCTAACAAGACTACGCTGACGA 58.931 45.455 0.00 0.00 43.93 4.20
5375 6144 3.162068 GTCTAACAAGACTACGCTGACG 58.838 50.000 0.00 0.00 39.38 4.35
5376 6145 3.500014 GGTCTAACAAGACTACGCTGAC 58.500 50.000 5.59 0.00 38.74 3.51
5377 6146 2.161012 CGGTCTAACAAGACTACGCTGA 59.839 50.000 5.59 0.00 38.74 4.26
5378 6147 2.095364 ACGGTCTAACAAGACTACGCTG 60.095 50.000 5.59 0.00 38.74 5.18
5379 6148 2.157738 ACGGTCTAACAAGACTACGCT 58.842 47.619 5.59 0.00 38.74 5.07
5380 6149 2.513893 GACGGTCTAACAAGACTACGC 58.486 52.381 0.00 0.00 38.74 4.42
5381 6150 2.413112 TCGACGGTCTAACAAGACTACG 59.587 50.000 6.57 8.60 38.74 3.51
5382 6151 3.723250 CGTCGACGGTCTAACAAGACTAC 60.723 52.174 29.70 0.00 38.74 2.73
5383 6152 2.413112 CGTCGACGGTCTAACAAGACTA 59.587 50.000 29.70 0.00 38.74 2.59
5384 6153 1.196354 CGTCGACGGTCTAACAAGACT 59.804 52.381 29.70 0.00 38.74 3.24
5385 6154 1.069636 ACGTCGACGGTCTAACAAGAC 60.070 52.381 37.89 4.30 44.95 3.01
5386 6155 1.229428 ACGTCGACGGTCTAACAAGA 58.771 50.000 37.89 0.00 44.95 3.02
5387 6156 2.158449 ACTACGTCGACGGTCTAACAAG 59.842 50.000 37.89 22.56 44.95 3.16
5388 6157 2.143122 ACTACGTCGACGGTCTAACAA 58.857 47.619 37.89 13.88 44.95 2.83
5389 6158 1.795768 ACTACGTCGACGGTCTAACA 58.204 50.000 37.89 14.86 44.95 2.41
5390 6159 4.375506 GCTATACTACGTCGACGGTCTAAC 60.376 50.000 37.89 17.04 44.95 2.34
5391 6160 3.736252 GCTATACTACGTCGACGGTCTAA 59.264 47.826 37.89 21.05 44.95 2.10
5392 6161 3.309388 GCTATACTACGTCGACGGTCTA 58.691 50.000 37.89 23.77 44.95 2.59
5393 6162 2.131183 GCTATACTACGTCGACGGTCT 58.869 52.381 37.89 22.52 44.95 3.85
5394 6163 1.193426 GGCTATACTACGTCGACGGTC 59.807 57.143 37.89 18.67 44.95 4.79
5395 6164 1.221414 GGCTATACTACGTCGACGGT 58.779 55.000 37.89 28.77 44.95 4.83
5396 6165 0.162507 CGGCTATACTACGTCGACGG 59.837 60.000 37.89 24.94 44.95 4.79
5397 6166 0.855349 ACGGCTATACTACGTCGACG 59.145 55.000 34.58 34.58 46.33 5.12
5398 6167 2.568766 GACGGCTATACTACGTCGAC 57.431 55.000 5.18 5.18 45.82 4.20
5402 6171 1.944778 GCCGACGGCTATACTACGT 59.055 57.895 31.30 0.00 46.69 3.57
5403 6172 4.834828 GCCGACGGCTATACTACG 57.165 61.111 31.30 0.00 46.69 3.51
5413 6182 1.827399 ATAAGCCCCTATGCCGACGG 61.827 60.000 10.29 10.29 0.00 4.79
5414 6183 0.670546 CATAAGCCCCTATGCCGACG 60.671 60.000 0.00 0.00 0.00 5.12
5415 6184 0.955919 GCATAAGCCCCTATGCCGAC 60.956 60.000 10.51 0.00 45.63 4.79
5416 6185 1.374947 GCATAAGCCCCTATGCCGA 59.625 57.895 10.51 0.00 45.63 5.54
5417 6186 3.987404 GCATAAGCCCCTATGCCG 58.013 61.111 10.51 0.00 45.63 5.69
5451 6220 2.601562 GGCTAAACTATGCCGACGG 58.398 57.895 10.29 10.29 39.71 4.79
5456 6225 1.496403 GCCGACGGCTAAACTATGCC 61.496 60.000 31.30 0.00 46.69 4.40
5457 6226 1.932277 GCCGACGGCTAAACTATGC 59.068 57.895 31.30 0.14 46.69 3.14
5468 6237 1.281656 GGAAAAACACTGCCGACGG 59.718 57.895 10.29 10.29 0.00 4.79
5469 6238 1.083015 CGGAAAAACACTGCCGACG 60.083 57.895 0.00 0.00 46.29 5.12
5470 6239 0.041576 GACGGAAAAACACTGCCGAC 60.042 55.000 7.16 0.00 46.29 4.79
5471 6240 0.179067 AGACGGAAAAACACTGCCGA 60.179 50.000 7.16 0.00 46.29 5.54
5473 6242 1.002792 GTCAGACGGAAAAACACTGCC 60.003 52.381 0.00 0.00 0.00 4.85
5474 6243 1.332904 CGTCAGACGGAAAAACACTGC 60.333 52.381 15.64 0.00 38.08 4.40
5475 6244 2.645628 CGTCAGACGGAAAAACACTG 57.354 50.000 15.64 0.00 38.08 3.66
5486 6255 3.103911 GTCCGTTGCCGTCAGACG 61.104 66.667 16.50 16.50 42.11 4.18
5487 6256 3.103911 CGTCCGTTGCCGTCAGAC 61.104 66.667 0.00 0.00 0.00 3.51
5488 6257 4.351938 CCGTCCGTTGCCGTCAGA 62.352 66.667 0.00 0.00 0.00 3.27
5507 6276 2.127232 GTCAGCGCTTTTGACGGC 60.127 61.111 7.50 0.00 36.01 5.68
5510 6279 0.161870 GACTCGTCAGCGCTTTTGAC 59.838 55.000 7.50 13.11 41.14 3.18
5511 6280 0.249280 TGACTCGTCAGCGCTTTTGA 60.249 50.000 7.50 0.00 38.14 2.69
5512 6281 0.792640 ATGACTCGTCAGCGCTTTTG 59.207 50.000 7.50 0.00 43.61 2.44
5513 6282 0.792640 CATGACTCGTCAGCGCTTTT 59.207 50.000 7.50 0.00 43.61 2.27
5514 6283 1.016130 CCATGACTCGTCAGCGCTTT 61.016 55.000 7.50 0.00 43.61 3.51
5515 6284 1.446792 CCATGACTCGTCAGCGCTT 60.447 57.895 7.50 0.00 43.61 4.68
5516 6285 2.182791 CCATGACTCGTCAGCGCT 59.817 61.111 2.64 2.64 43.61 5.92
5517 6286 2.835701 TTCCCATGACTCGTCAGCGC 62.836 60.000 0.00 0.00 43.61 5.92
5518 6287 0.803768 CTTCCCATGACTCGTCAGCG 60.804 60.000 5.91 0.00 43.61 5.18
5519 6288 1.086634 GCTTCCCATGACTCGTCAGC 61.087 60.000 5.91 0.00 43.61 4.26
5520 6289 0.460987 GGCTTCCCATGACTCGTCAG 60.461 60.000 5.91 0.00 43.61 3.51
5521 6290 1.191489 TGGCTTCCCATGACTCGTCA 61.191 55.000 1.79 1.79 44.59 4.35
5522 6291 0.741221 GTGGCTTCCCATGACTCGTC 60.741 60.000 0.00 0.00 44.51 4.20
5523 6292 1.296715 GTGGCTTCCCATGACTCGT 59.703 57.895 0.00 0.00 44.51 4.18
5524 6293 4.208632 GTGGCTTCCCATGACTCG 57.791 61.111 0.00 0.00 44.51 4.18
5530 6299 0.907704 TCTACCACGTGGCTTCCCAT 60.908 55.000 34.26 15.54 44.51 4.00
5531 6300 1.534476 TCTACCACGTGGCTTCCCA 60.534 57.895 34.26 9.75 39.32 4.37
5532 6301 1.218316 CTCTACCACGTGGCTTCCC 59.782 63.158 34.26 0.00 39.32 3.97
5533 6302 1.218316 CCTCTACCACGTGGCTTCC 59.782 63.158 34.26 0.00 39.32 3.46
5534 6303 1.135170 GTACCTCTACCACGTGGCTTC 60.135 57.143 34.26 12.11 39.32 3.86
5535 6304 0.893447 GTACCTCTACCACGTGGCTT 59.107 55.000 34.26 18.66 39.32 4.35
5536 6305 1.310933 CGTACCTCTACCACGTGGCT 61.311 60.000 34.26 22.43 39.32 4.75
5537 6306 1.138247 CGTACCTCTACCACGTGGC 59.862 63.158 34.26 14.18 39.32 5.01
5538 6307 1.138247 GCGTACCTCTACCACGTGG 59.862 63.158 32.83 32.83 37.95 4.94
5539 6308 1.138247 GGCGTACCTCTACCACGTG 59.862 63.158 9.08 9.08 37.95 4.49
5540 6309 2.401766 CGGCGTACCTCTACCACGT 61.402 63.158 0.00 0.00 37.95 4.49
5541 6310 2.108514 TCGGCGTACCTCTACCACG 61.109 63.158 6.85 0.00 38.66 4.94
5542 6311 1.431036 GTCGGCGTACCTCTACCAC 59.569 63.158 6.85 0.00 0.00 4.16
5543 6312 2.108514 CGTCGGCGTACCTCTACCA 61.109 63.158 6.85 0.00 0.00 3.25
5544 6313 2.711924 CGTCGGCGTACCTCTACC 59.288 66.667 6.85 0.00 0.00 3.18
5545 6314 2.711924 CCGTCGGCGTACCTCTAC 59.288 66.667 9.28 0.00 36.15 2.59
5546 6315 3.204827 GCCGTCGGCGTACCTCTA 61.205 66.667 22.50 0.00 39.62 2.43
5568 6337 2.296471 AGATTTCTACCTATGCCGACGG 59.704 50.000 10.29 10.29 0.00 4.79
5569 6338 3.644884 AGATTTCTACCTATGCCGACG 57.355 47.619 0.00 0.00 0.00 5.12
5575 6344 4.184629 GCCGGCATAGATTTCTACCTATG 58.815 47.826 24.80 0.00 42.99 2.23
5576 6345 3.119101 CGCCGGCATAGATTTCTACCTAT 60.119 47.826 28.98 0.00 0.00 2.57
5577 6346 2.230508 CGCCGGCATAGATTTCTACCTA 59.769 50.000 28.98 0.00 0.00 3.08
5578 6347 1.000955 CGCCGGCATAGATTTCTACCT 59.999 52.381 28.98 0.00 0.00 3.08
5579 6348 1.429463 CGCCGGCATAGATTTCTACC 58.571 55.000 28.98 0.00 0.00 3.18
5580 6349 1.429463 CCGCCGGCATAGATTTCTAC 58.571 55.000 28.98 0.00 0.00 2.59
5581 6350 3.906660 CCGCCGGCATAGATTTCTA 57.093 52.632 28.98 0.00 0.00 2.10
5582 6351 4.779475 CCGCCGGCATAGATTTCT 57.221 55.556 28.98 0.00 0.00 2.52
5611 6380 2.809601 CACGTGGCAGAGGTACGC 60.810 66.667 7.95 0.00 41.19 4.42
5612 6381 2.126071 CCACGTGGCAGAGGTACG 60.126 66.667 24.02 0.00 42.98 3.67
5631 6400 2.358737 CCAGGAGCACCACGGAAC 60.359 66.667 2.07 0.00 38.94 3.62
5632 6401 2.847234 ACCAGGAGCACCACGGAA 60.847 61.111 14.31 0.00 38.94 4.30
5633 6402 3.625897 CACCAGGAGCACCACGGA 61.626 66.667 14.31 0.00 38.94 4.69
5634 6403 4.704833 CCACCAGGAGCACCACGG 62.705 72.222 2.07 4.99 38.94 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.