Multiple sequence alignment - TraesCS5A01G220300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G220300 chr5A 100.000 2411 0 0 1 2411 436985022 436987432 0.000000e+00 4453.0
1 TraesCS5A01G220300 chr5A 95.763 118 4 1 1775 1891 299502593 299502476 3.160000e-44 189.0
2 TraesCS5A01G220300 chr5A 95.000 60 3 0 223 282 545060430 545060371 7.100000e-16 95.3
3 TraesCS5A01G220300 chr5A 93.651 63 4 0 220 282 601257353 601257415 7.100000e-16 95.3
4 TraesCS5A01G220300 chr5A 100.000 28 0 0 2059 2086 436987701 436987674 4.000000e-03 52.8
5 TraesCS5A01G220300 chr1D 91.791 1413 86 8 398 1786 424750437 424751843 0.000000e+00 1940.0
6 TraesCS5A01G220300 chr1D 94.485 272 7 3 1888 2158 424751840 424752104 1.720000e-111 412.0
7 TraesCS5A01G220300 chr1D 96.047 253 10 0 2153 2405 424753783 424754035 1.720000e-111 412.0
8 TraesCS5A01G220300 chr1D 100.000 28 0 0 2059 2086 424754307 424754280 4.000000e-03 52.8
9 TraesCS5A01G220300 chr5B 91.292 1424 82 12 398 1785 582276580 582275163 0.000000e+00 1905.0
10 TraesCS5A01G220300 chr5B 93.143 525 29 3 1888 2411 582275165 582274647 0.000000e+00 763.0
11 TraesCS5A01G220300 chr5B 95.690 116 5 0 1776 1891 697185050 697184935 1.140000e-43 187.0
12 TraesCS5A01G220300 chr5B 84.737 190 14 11 31 206 393755640 393755828 2.460000e-40 176.0
13 TraesCS5A01G220300 chr5B 100.000 28 0 0 2059 2086 582274382 582274409 4.000000e-03 52.8
14 TraesCS5A01G220300 chr7D 90.897 780 34 4 1031 1786 36473249 36474015 0.000000e+00 1013.0
15 TraesCS5A01G220300 chr7D 95.817 526 16 4 1888 2411 36474012 36474533 0.000000e+00 845.0
16 TraesCS5A01G220300 chr7D 90.379 343 32 1 396 737 36472913 36473255 1.310000e-122 449.0
17 TraesCS5A01G220300 chr7D 100.000 28 0 0 2059 2086 36474796 36474769 4.000000e-03 52.8
18 TraesCS5A01G220300 chr1B 81.789 950 90 25 890 1786 542932215 542933134 0.000000e+00 719.0
19 TraesCS5A01G220300 chr1B 86.149 296 28 4 2124 2411 542933462 542933752 8.370000e-80 307.0
20 TraesCS5A01G220300 chr1B 88.268 179 13 5 1888 2066 542933131 542933301 8.740000e-50 207.0
21 TraesCS5A01G220300 chr3D 90.536 317 23 3 1384 1700 51121655 51121964 1.720000e-111 412.0
22 TraesCS5A01G220300 chr3D 94.958 119 5 1 1782 1900 128992749 128992632 4.090000e-43 185.0
23 TraesCS5A01G220300 chr3D 83.854 192 20 10 800 983 69432219 69432031 3.190000e-39 172.0
24 TraesCS5A01G220300 chr6B 90.217 184 18 0 1517 1700 481665422 481665239 8.610000e-60 241.0
25 TraesCS5A01G220300 chr6B 89.362 141 11 4 1774 1912 135558999 135559137 8.860000e-40 174.0
26 TraesCS5A01G220300 chr7B 95.726 117 3 2 1785 1901 547472372 547472486 1.140000e-43 187.0
27 TraesCS5A01G220300 chr6D 95.690 116 5 0 1777 1892 112344368 112344483 1.140000e-43 187.0
28 TraesCS5A01G220300 chr3A 93.077 130 6 2 1785 1914 65345866 65345740 1.140000e-43 187.0
29 TraesCS5A01G220300 chr3A 89.928 139 9 5 1785 1919 654060034 654059897 8.860000e-40 174.0
30 TraesCS5A01G220300 chr3A 91.667 84 5 2 1445 1528 700359341 700359422 5.450000e-22 115.0
31 TraesCS5A01G220300 chr2A 94.262 122 5 2 1781 1901 57865387 57865507 4.090000e-43 185.0
32 TraesCS5A01G220300 chr2A 91.045 67 5 1 220 286 49930299 49930364 3.300000e-14 89.8
33 TraesCS5A01G220300 chr7A 91.667 84 5 2 1445 1528 671185955 671186036 5.450000e-22 115.0
34 TraesCS5A01G220300 chr5D 91.667 84 5 2 1445 1528 116654015 116653934 5.450000e-22 115.0
35 TraesCS5A01G220300 chr5D 91.176 68 5 1 223 290 233153600 233153534 9.180000e-15 91.6
36 TraesCS5A01G220300 chr5D 93.443 61 4 0 223 283 460447970 460447910 9.180000e-15 91.6
37 TraesCS5A01G220300 chr2B 87.037 108 6 6 1937 2044 512176181 512176280 5.450000e-22 115.0
38 TraesCS5A01G220300 chr1A 93.750 64 4 0 220 283 321291381 321291444 1.970000e-16 97.1
39 TraesCS5A01G220300 chr1A 87.671 73 8 1 220 292 145199885 145199956 1.540000e-12 84.2
40 TraesCS5A01G220300 chr6A 95.000 60 3 0 223 282 13437234 13437175 7.100000e-16 95.3
41 TraesCS5A01G220300 chr4A 91.304 69 4 2 220 286 556378479 556378547 2.550000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G220300 chr5A 436985022 436987432 2410 False 4453.000000 4453 100.000000 1 2411 1 chr5A.!!$F1 2410
1 TraesCS5A01G220300 chr1D 424750437 424754035 3598 False 921.333333 1940 94.107667 398 2405 3 chr1D.!!$F1 2007
2 TraesCS5A01G220300 chr5B 582274647 582276580 1933 True 1334.000000 1905 92.217500 398 2411 2 chr5B.!!$R2 2013
3 TraesCS5A01G220300 chr7D 36472913 36474533 1620 False 769.000000 1013 92.364333 396 2411 3 chr7D.!!$F1 2015
4 TraesCS5A01G220300 chr1B 542932215 542933752 1537 False 411.000000 719 85.402000 890 2411 3 chr1B.!!$F1 1521

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
173 174 0.040692 GTACTCGACACTGACGCACA 60.041 55.0 0.0 0.0 0.0 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1869 1962 0.179065 CCCCCTCCGTTCGGAATTAC 60.179 60.0 14.79 0.0 33.41 1.89 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.462678 GTGTCGCCCTCTCCCCTC 61.463 72.222 0.00 0.00 0.00 4.30
26 27 3.673597 TGTCGCCCTCTCCCCTCT 61.674 66.667 0.00 0.00 0.00 3.69
27 28 2.835895 GTCGCCCTCTCCCCTCTC 60.836 72.222 0.00 0.00 0.00 3.20
28 29 4.507916 TCGCCCTCTCCCCTCTCG 62.508 72.222 0.00 0.00 0.00 4.04
31 32 2.364317 CCCTCTCCCCTCTCGCAA 60.364 66.667 0.00 0.00 0.00 4.85
32 33 1.990060 CCCTCTCCCCTCTCGCAAA 60.990 63.158 0.00 0.00 0.00 3.68
33 34 1.553690 CCCTCTCCCCTCTCGCAAAA 61.554 60.000 0.00 0.00 0.00 2.44
34 35 0.324943 CCTCTCCCCTCTCGCAAAAA 59.675 55.000 0.00 0.00 0.00 1.94
55 56 7.740519 AAAAACAAAACAATGAAGTCGAGAG 57.259 32.000 0.00 0.00 0.00 3.20
56 57 6.677781 AAACAAAACAATGAAGTCGAGAGA 57.322 33.333 0.00 0.00 38.16 3.10
57 58 6.677781 AACAAAACAATGAAGTCGAGAGAA 57.322 33.333 0.00 0.00 45.01 2.87
58 59 6.677781 ACAAAACAATGAAGTCGAGAGAAA 57.322 33.333 0.00 0.00 45.01 2.52
59 60 6.719365 ACAAAACAATGAAGTCGAGAGAAAG 58.281 36.000 0.00 0.00 45.01 2.62
60 61 4.999751 AACAATGAAGTCGAGAGAAAGC 57.000 40.909 0.00 0.00 45.01 3.51
61 62 3.995199 ACAATGAAGTCGAGAGAAAGCA 58.005 40.909 0.00 0.00 45.01 3.91
62 63 4.380531 ACAATGAAGTCGAGAGAAAGCAA 58.619 39.130 0.00 0.00 45.01 3.91
63 64 4.816385 ACAATGAAGTCGAGAGAAAGCAAA 59.184 37.500 0.00 0.00 45.01 3.68
64 65 5.296780 ACAATGAAGTCGAGAGAAAGCAAAA 59.703 36.000 0.00 0.00 45.01 2.44
65 66 5.604010 ATGAAGTCGAGAGAAAGCAAAAG 57.396 39.130 0.00 0.00 45.01 2.27
66 67 4.693283 TGAAGTCGAGAGAAAGCAAAAGA 58.307 39.130 0.00 0.00 45.01 2.52
67 68 5.116180 TGAAGTCGAGAGAAAGCAAAAGAA 58.884 37.500 0.00 0.00 45.01 2.52
68 69 5.235186 TGAAGTCGAGAGAAAGCAAAAGAAG 59.765 40.000 0.00 0.00 45.01 2.85
69 70 4.061596 AGTCGAGAGAAAGCAAAAGAAGG 58.938 43.478 0.00 0.00 45.01 3.46
70 71 3.810386 GTCGAGAGAAAGCAAAAGAAGGT 59.190 43.478 0.00 0.00 45.01 3.50
71 72 4.058817 TCGAGAGAAAGCAAAAGAAGGTC 58.941 43.478 0.00 0.00 37.03 3.85
72 73 3.809832 CGAGAGAAAGCAAAAGAAGGTCA 59.190 43.478 0.00 0.00 0.00 4.02
73 74 4.453819 CGAGAGAAAGCAAAAGAAGGTCAT 59.546 41.667 0.00 0.00 0.00 3.06
74 75 5.049129 CGAGAGAAAGCAAAAGAAGGTCATT 60.049 40.000 0.00 0.00 0.00 2.57
75 76 6.514048 CGAGAGAAAGCAAAAGAAGGTCATTT 60.514 38.462 0.00 0.00 0.00 2.32
76 77 6.743110 AGAGAAAGCAAAAGAAGGTCATTTC 58.257 36.000 0.00 0.00 0.00 2.17
77 78 6.322201 AGAGAAAGCAAAAGAAGGTCATTTCA 59.678 34.615 0.00 0.00 0.00 2.69
78 79 6.510536 AGAAAGCAAAAGAAGGTCATTTCAG 58.489 36.000 0.00 0.00 0.00 3.02
79 80 6.322201 AGAAAGCAAAAGAAGGTCATTTCAGA 59.678 34.615 0.00 0.00 0.00 3.27
80 81 6.661304 AAGCAAAAGAAGGTCATTTCAGAT 57.339 33.333 0.00 0.00 0.00 2.90
81 82 6.661304 AGCAAAAGAAGGTCATTTCAGATT 57.339 33.333 0.00 0.00 0.00 2.40
82 83 7.059202 AGCAAAAGAAGGTCATTTCAGATTT 57.941 32.000 0.00 0.00 0.00 2.17
83 84 7.150640 AGCAAAAGAAGGTCATTTCAGATTTC 58.849 34.615 0.00 0.00 0.00 2.17
84 85 6.367149 GCAAAAGAAGGTCATTTCAGATTTCC 59.633 38.462 0.00 0.00 0.00 3.13
85 86 7.664758 CAAAAGAAGGTCATTTCAGATTTCCT 58.335 34.615 0.00 0.00 0.00 3.36
86 87 7.459795 AAAGAAGGTCATTTCAGATTTCCTC 57.540 36.000 0.00 0.00 0.00 3.71
87 88 5.504853 AGAAGGTCATTTCAGATTTCCTCC 58.495 41.667 0.00 0.00 0.00 4.30
88 89 4.242336 AGGTCATTTCAGATTTCCTCCC 57.758 45.455 0.00 0.00 0.00 4.30
89 90 3.854994 AGGTCATTTCAGATTTCCTCCCT 59.145 43.478 0.00 0.00 0.00 4.20
90 91 3.950395 GGTCATTTCAGATTTCCTCCCTG 59.050 47.826 0.00 0.00 0.00 4.45
91 92 4.568592 GGTCATTTCAGATTTCCTCCCTGT 60.569 45.833 0.00 0.00 0.00 4.00
92 93 4.637977 GTCATTTCAGATTTCCTCCCTGTC 59.362 45.833 0.00 0.00 0.00 3.51
93 94 3.721087 TTTCAGATTTCCTCCCTGTCC 57.279 47.619 0.00 0.00 0.00 4.02
94 95 1.584724 TCAGATTTCCTCCCTGTCCC 58.415 55.000 0.00 0.00 0.00 4.46
95 96 0.548510 CAGATTTCCTCCCTGTCCCC 59.451 60.000 0.00 0.00 0.00 4.81
96 97 0.121197 AGATTTCCTCCCTGTCCCCA 59.879 55.000 0.00 0.00 0.00 4.96
97 98 1.226311 GATTTCCTCCCTGTCCCCAT 58.774 55.000 0.00 0.00 0.00 4.00
98 99 0.929244 ATTTCCTCCCTGTCCCCATG 59.071 55.000 0.00 0.00 0.00 3.66
99 100 1.863155 TTTCCTCCCTGTCCCCATGC 61.863 60.000 0.00 0.00 0.00 4.06
100 101 4.181010 CCTCCCTGTCCCCATGCG 62.181 72.222 0.00 0.00 0.00 4.73
101 102 4.864334 CTCCCTGTCCCCATGCGC 62.864 72.222 0.00 0.00 0.00 6.09
105 106 3.499737 CTGTCCCCATGCGCGTTC 61.500 66.667 8.43 0.00 0.00 3.95
106 107 3.958147 CTGTCCCCATGCGCGTTCT 62.958 63.158 8.43 0.00 0.00 3.01
107 108 3.195698 GTCCCCATGCGCGTTCTC 61.196 66.667 8.43 0.00 0.00 2.87
108 109 3.700970 TCCCCATGCGCGTTCTCA 61.701 61.111 8.43 0.00 0.00 3.27
109 110 2.514592 CCCCATGCGCGTTCTCAT 60.515 61.111 8.43 0.00 0.00 2.90
110 111 2.114670 CCCCATGCGCGTTCTCATT 61.115 57.895 8.43 0.00 0.00 2.57
111 112 1.656818 CCCCATGCGCGTTCTCATTT 61.657 55.000 8.43 0.00 0.00 2.32
112 113 0.523968 CCCATGCGCGTTCTCATTTG 60.524 55.000 8.43 0.00 0.00 2.32
113 114 0.447406 CCATGCGCGTTCTCATTTGA 59.553 50.000 8.43 0.00 0.00 2.69
114 115 1.064505 CCATGCGCGTTCTCATTTGAT 59.935 47.619 8.43 0.00 0.00 2.57
115 116 2.478370 CCATGCGCGTTCTCATTTGATT 60.478 45.455 8.43 0.00 0.00 2.57
116 117 2.525750 TGCGCGTTCTCATTTGATTC 57.474 45.000 8.43 0.00 0.00 2.52
117 118 2.076100 TGCGCGTTCTCATTTGATTCT 58.924 42.857 8.43 0.00 0.00 2.40
118 119 2.094258 TGCGCGTTCTCATTTGATTCTC 59.906 45.455 8.43 0.00 0.00 2.87
119 120 2.349886 GCGCGTTCTCATTTGATTCTCT 59.650 45.455 8.43 0.00 0.00 3.10
120 121 3.181516 GCGCGTTCTCATTTGATTCTCTT 60.182 43.478 8.43 0.00 0.00 2.85
121 122 4.670221 GCGCGTTCTCATTTGATTCTCTTT 60.670 41.667 8.43 0.00 0.00 2.52
122 123 5.385617 CGCGTTCTCATTTGATTCTCTTTT 58.614 37.500 0.00 0.00 0.00 2.27
123 124 5.853282 CGCGTTCTCATTTGATTCTCTTTTT 59.147 36.000 0.00 0.00 0.00 1.94
138 139 2.629002 TTTTTCCAGGAGTGAGCGC 58.371 52.632 0.00 0.00 0.00 5.92
139 140 0.889186 TTTTTCCAGGAGTGAGCGCC 60.889 55.000 2.29 0.00 34.56 6.53
140 141 2.748058 TTTTCCAGGAGTGAGCGCCC 62.748 60.000 2.29 0.00 34.94 6.13
142 143 4.767255 CCAGGAGTGAGCGCCCAC 62.767 72.222 14.98 14.98 34.94 4.61
143 144 4.007644 CAGGAGTGAGCGCCCACA 62.008 66.667 24.53 10.09 39.42 4.17
144 145 3.005539 AGGAGTGAGCGCCCACAT 61.006 61.111 24.53 9.20 39.42 3.21
145 146 2.045926 GGAGTGAGCGCCCACATT 60.046 61.111 24.53 3.88 39.42 2.71
146 147 1.675641 GGAGTGAGCGCCCACATTT 60.676 57.895 24.53 3.04 39.42 2.32
147 148 1.503542 GAGTGAGCGCCCACATTTG 59.496 57.895 24.53 0.00 39.42 2.32
148 149 0.955428 GAGTGAGCGCCCACATTTGA 60.955 55.000 24.53 0.00 39.42 2.69
149 150 0.322816 AGTGAGCGCCCACATTTGAT 60.323 50.000 24.53 0.00 39.42 2.57
150 151 0.527565 GTGAGCGCCCACATTTGATT 59.472 50.000 17.95 0.00 37.04 2.57
151 152 0.810648 TGAGCGCCCACATTTGATTC 59.189 50.000 2.29 0.00 0.00 2.52
152 153 1.098050 GAGCGCCCACATTTGATTCT 58.902 50.000 2.29 0.00 0.00 2.40
153 154 0.813184 AGCGCCCACATTTGATTCTG 59.187 50.000 2.29 0.00 0.00 3.02
154 155 0.179129 GCGCCCACATTTGATTCTGG 60.179 55.000 0.00 0.00 0.00 3.86
155 156 1.176527 CGCCCACATTTGATTCTGGT 58.823 50.000 0.00 0.00 0.00 4.00
156 157 2.364632 CGCCCACATTTGATTCTGGTA 58.635 47.619 0.00 0.00 0.00 3.25
157 158 2.097466 CGCCCACATTTGATTCTGGTAC 59.903 50.000 0.00 0.00 0.00 3.34
158 159 3.356290 GCCCACATTTGATTCTGGTACT 58.644 45.455 0.00 0.00 0.00 2.73
159 160 3.378427 GCCCACATTTGATTCTGGTACTC 59.622 47.826 0.00 0.00 0.00 2.59
160 161 3.623060 CCCACATTTGATTCTGGTACTCG 59.377 47.826 0.00 0.00 0.00 4.18
161 162 4.503910 CCACATTTGATTCTGGTACTCGA 58.496 43.478 0.00 0.00 0.00 4.04
162 163 4.330074 CCACATTTGATTCTGGTACTCGAC 59.670 45.833 0.00 0.00 0.00 4.20
163 164 4.929211 CACATTTGATTCTGGTACTCGACA 59.071 41.667 0.00 0.00 0.00 4.35
164 165 4.929808 ACATTTGATTCTGGTACTCGACAC 59.070 41.667 0.00 0.00 0.00 3.67
165 166 4.866508 TTTGATTCTGGTACTCGACACT 57.133 40.909 0.00 0.00 0.00 3.55
166 167 3.850122 TGATTCTGGTACTCGACACTG 57.150 47.619 0.00 0.00 0.00 3.66
167 168 3.418047 TGATTCTGGTACTCGACACTGA 58.582 45.455 0.00 0.00 0.00 3.41
168 169 3.190744 TGATTCTGGTACTCGACACTGAC 59.809 47.826 0.00 0.00 0.00 3.51
169 170 1.154197 TCTGGTACTCGACACTGACG 58.846 55.000 0.00 0.00 0.00 4.35
170 171 0.454620 CTGGTACTCGACACTGACGC 60.455 60.000 0.00 0.00 0.00 5.19
171 172 1.167781 TGGTACTCGACACTGACGCA 61.168 55.000 0.00 0.00 0.00 5.24
172 173 0.728466 GGTACTCGACACTGACGCAC 60.728 60.000 0.00 0.00 0.00 5.34
173 174 0.040692 GTACTCGACACTGACGCACA 60.041 55.000 0.00 0.00 0.00 4.57
174 175 0.040692 TACTCGACACTGACGCACAC 60.041 55.000 0.00 0.00 0.00 3.82
185 186 3.888221 CGCACACGTTTCAACTGC 58.112 55.556 0.00 0.00 33.53 4.40
186 187 1.654137 CGCACACGTTTCAACTGCC 60.654 57.895 0.00 0.00 33.53 4.85
187 188 1.431440 GCACACGTTTCAACTGCCA 59.569 52.632 0.00 0.00 0.00 4.92
188 189 0.865639 GCACACGTTTCAACTGCCAC 60.866 55.000 0.00 0.00 0.00 5.01
189 190 0.449786 CACACGTTTCAACTGCCACA 59.550 50.000 0.00 0.00 0.00 4.17
190 191 1.065401 CACACGTTTCAACTGCCACAT 59.935 47.619 0.00 0.00 0.00 3.21
191 192 2.289274 CACACGTTTCAACTGCCACATA 59.711 45.455 0.00 0.00 0.00 2.29
192 193 2.289547 ACACGTTTCAACTGCCACATAC 59.710 45.455 0.00 0.00 0.00 2.39
193 194 2.289274 CACGTTTCAACTGCCACATACA 59.711 45.455 0.00 0.00 0.00 2.29
194 195 3.058293 CACGTTTCAACTGCCACATACAT 60.058 43.478 0.00 0.00 0.00 2.29
195 196 3.058293 ACGTTTCAACTGCCACATACATG 60.058 43.478 0.00 0.00 0.00 3.21
196 197 3.058293 CGTTTCAACTGCCACATACATGT 60.058 43.478 2.69 2.69 42.84 3.21
197 198 4.475944 GTTTCAACTGCCACATACATGTC 58.524 43.478 0.00 0.00 39.39 3.06
198 199 2.710377 TCAACTGCCACATACATGTCC 58.290 47.619 0.00 0.00 39.39 4.02
199 200 2.039613 TCAACTGCCACATACATGTCCA 59.960 45.455 0.00 0.00 39.39 4.02
200 201 2.113860 ACTGCCACATACATGTCCAC 57.886 50.000 0.00 0.00 39.39 4.02
201 202 1.630369 ACTGCCACATACATGTCCACT 59.370 47.619 0.00 0.00 39.39 4.00
202 203 2.837591 ACTGCCACATACATGTCCACTA 59.162 45.455 0.00 0.00 39.39 2.74
203 204 3.198068 CTGCCACATACATGTCCACTAC 58.802 50.000 0.00 0.00 39.39 2.73
204 205 2.837591 TGCCACATACATGTCCACTACT 59.162 45.455 0.00 0.00 39.39 2.57
205 206 3.118775 TGCCACATACATGTCCACTACTC 60.119 47.826 0.00 0.00 39.39 2.59
206 207 3.741388 GCCACATACATGTCCACTACTCC 60.741 52.174 0.00 0.00 39.39 3.85
207 208 3.181465 CCACATACATGTCCACTACTCCC 60.181 52.174 0.00 0.00 39.39 4.30
208 209 3.706594 CACATACATGTCCACTACTCCCT 59.293 47.826 0.00 0.00 39.39 4.20
209 210 3.961408 ACATACATGTCCACTACTCCCTC 59.039 47.826 0.00 0.00 35.87 4.30
210 211 1.475403 ACATGTCCACTACTCCCTCG 58.525 55.000 0.00 0.00 0.00 4.63
211 212 1.272536 ACATGTCCACTACTCCCTCGT 60.273 52.381 0.00 0.00 0.00 4.18
212 213 1.825474 CATGTCCACTACTCCCTCGTT 59.175 52.381 0.00 0.00 0.00 3.85
213 214 1.542492 TGTCCACTACTCCCTCGTTC 58.458 55.000 0.00 0.00 0.00 3.95
214 215 0.816373 GTCCACTACTCCCTCGTTCC 59.184 60.000 0.00 0.00 0.00 3.62
215 216 0.679002 TCCACTACTCCCTCGTTCCG 60.679 60.000 0.00 0.00 0.00 4.30
216 217 0.679002 CCACTACTCCCTCGTTCCGA 60.679 60.000 0.00 0.00 0.00 4.55
217 218 1.171308 CACTACTCCCTCGTTCCGAA 58.829 55.000 0.00 0.00 34.74 4.30
218 219 1.749634 CACTACTCCCTCGTTCCGAAT 59.250 52.381 0.00 0.00 34.74 3.34
219 220 2.165845 CACTACTCCCTCGTTCCGAATT 59.834 50.000 0.00 0.00 34.74 2.17
220 221 3.379372 CACTACTCCCTCGTTCCGAATTA 59.621 47.826 0.00 0.00 34.74 1.40
221 222 2.955477 ACTCCCTCGTTCCGAATTAC 57.045 50.000 0.00 0.00 34.74 1.89
222 223 2.173519 ACTCCCTCGTTCCGAATTACA 58.826 47.619 0.00 0.00 34.74 2.41
223 224 2.764572 ACTCCCTCGTTCCGAATTACAT 59.235 45.455 0.00 0.00 34.74 2.29
224 225 3.123804 CTCCCTCGTTCCGAATTACATG 58.876 50.000 0.00 0.00 34.74 3.21
225 226 2.498481 TCCCTCGTTCCGAATTACATGT 59.502 45.455 2.69 2.69 34.74 3.21
226 227 3.700539 TCCCTCGTTCCGAATTACATGTA 59.299 43.478 0.08 0.08 34.74 2.29
227 228 4.342951 TCCCTCGTTCCGAATTACATGTAT 59.657 41.667 6.36 0.00 34.74 2.29
228 229 5.054477 CCCTCGTTCCGAATTACATGTATT 58.946 41.667 6.36 0.00 34.74 1.89
229 230 5.526111 CCCTCGTTCCGAATTACATGTATTT 59.474 40.000 6.36 9.51 34.74 1.40
230 231 6.037830 CCCTCGTTCCGAATTACATGTATTTT 59.962 38.462 6.36 3.90 34.74 1.82
231 232 7.225145 CCCTCGTTCCGAATTACATGTATTTTA 59.775 37.037 6.36 0.00 34.74 1.52
232 233 8.273557 CCTCGTTCCGAATTACATGTATTTTAG 58.726 37.037 6.36 7.86 34.74 1.85
233 234 8.706492 TCGTTCCGAATTACATGTATTTTAGT 57.294 30.769 6.36 0.00 31.06 2.24
234 235 9.153721 TCGTTCCGAATTACATGTATTTTAGTT 57.846 29.630 6.36 0.00 31.06 2.24
235 236 9.417284 CGTTCCGAATTACATGTATTTTAGTTC 57.583 33.333 6.36 0.00 0.00 3.01
266 267 8.964476 ATATCCATTTCTGTGACGAGTAATTT 57.036 30.769 0.00 0.00 0.00 1.82
267 268 6.480524 TCCATTTCTGTGACGAGTAATTTG 57.519 37.500 0.00 0.00 0.00 2.32
268 269 6.227522 TCCATTTCTGTGACGAGTAATTTGA 58.772 36.000 0.00 0.00 0.00 2.69
269 270 6.708502 TCCATTTCTGTGACGAGTAATTTGAA 59.291 34.615 0.00 0.00 0.00 2.69
270 271 7.227711 TCCATTTCTGTGACGAGTAATTTGAAA 59.772 33.333 0.00 0.00 0.00 2.69
271 272 7.323656 CCATTTCTGTGACGAGTAATTTGAAAC 59.676 37.037 0.00 0.00 0.00 2.78
272 273 5.570262 TCTGTGACGAGTAATTTGAAACG 57.430 39.130 0.00 0.00 0.00 3.60
273 274 4.446385 TCTGTGACGAGTAATTTGAAACGG 59.554 41.667 0.00 0.00 0.00 4.44
274 275 4.370049 TGTGACGAGTAATTTGAAACGGA 58.630 39.130 0.00 0.00 0.00 4.69
275 276 4.446385 TGTGACGAGTAATTTGAAACGGAG 59.554 41.667 0.00 0.00 0.00 4.63
276 277 3.991773 TGACGAGTAATTTGAAACGGAGG 59.008 43.478 0.00 0.00 0.00 4.30
277 278 4.240096 GACGAGTAATTTGAAACGGAGGA 58.760 43.478 0.00 0.00 0.00 3.71
278 279 4.634199 ACGAGTAATTTGAAACGGAGGAA 58.366 39.130 0.00 0.00 0.00 3.36
279 280 4.689345 ACGAGTAATTTGAAACGGAGGAAG 59.311 41.667 0.00 0.00 0.00 3.46
280 281 4.689345 CGAGTAATTTGAAACGGAGGAAGT 59.311 41.667 0.00 0.00 0.00 3.01
281 282 5.865552 CGAGTAATTTGAAACGGAGGAAGTA 59.134 40.000 0.00 0.00 0.00 2.24
282 283 6.183360 CGAGTAATTTGAAACGGAGGAAGTAC 60.183 42.308 0.00 0.00 0.00 2.73
283 284 6.766429 AGTAATTTGAAACGGAGGAAGTACT 58.234 36.000 0.00 0.00 0.00 2.73
284 285 7.899973 AGTAATTTGAAACGGAGGAAGTACTA 58.100 34.615 0.00 0.00 31.72 1.82
285 286 8.370182 AGTAATTTGAAACGGAGGAAGTACTAA 58.630 33.333 0.00 0.00 31.72 2.24
286 287 7.430992 AATTTGAAACGGAGGAAGTACTAAC 57.569 36.000 0.00 0.00 0.00 2.34
287 288 5.796424 TTGAAACGGAGGAAGTACTAACT 57.204 39.130 0.00 0.00 37.65 2.24
289 290 6.899393 TGAAACGGAGGAAGTACTAACTTA 57.101 37.500 0.00 0.00 46.09 2.24
290 291 7.472334 TGAAACGGAGGAAGTACTAACTTAT 57.528 36.000 0.00 0.00 46.09 1.73
291 292 7.318141 TGAAACGGAGGAAGTACTAACTTATG 58.682 38.462 0.00 0.00 46.09 1.90
292 293 6.847421 AACGGAGGAAGTACTAACTTATGT 57.153 37.500 0.00 0.00 46.09 2.29
293 294 7.944729 AACGGAGGAAGTACTAACTTATGTA 57.055 36.000 0.00 0.00 46.09 2.29
294 295 7.944729 ACGGAGGAAGTACTAACTTATGTAA 57.055 36.000 0.00 0.00 46.09 2.41
295 296 8.530804 ACGGAGGAAGTACTAACTTATGTAAT 57.469 34.615 0.00 0.00 46.09 1.89
296 297 8.411683 ACGGAGGAAGTACTAACTTATGTAATG 58.588 37.037 0.00 0.00 46.09 1.90
297 298 7.866393 CGGAGGAAGTACTAACTTATGTAATGG 59.134 40.741 0.00 0.00 46.09 3.16
298 299 8.702819 GGAGGAAGTACTAACTTATGTAATGGT 58.297 37.037 0.00 0.00 46.09 3.55
313 314 3.853104 TGGTACAGTACATGGCTGC 57.147 52.632 12.89 0.00 37.47 5.25
314 315 0.980423 TGGTACAGTACATGGCTGCA 59.020 50.000 12.89 4.38 37.47 4.41
315 316 1.338674 TGGTACAGTACATGGCTGCAC 60.339 52.381 12.89 14.06 37.47 4.57
316 317 1.338674 GGTACAGTACATGGCTGCACA 60.339 52.381 18.42 0.00 37.47 4.57
317 318 1.732259 GTACAGTACATGGCTGCACAC 59.268 52.381 16.30 10.03 37.47 3.82
318 319 0.108396 ACAGTACATGGCTGCACACA 59.892 50.000 16.30 0.00 37.47 3.72
319 320 1.271543 ACAGTACATGGCTGCACACAT 60.272 47.619 16.30 0.00 37.47 3.21
320 321 1.399440 CAGTACATGGCTGCACACATC 59.601 52.381 0.50 0.00 0.00 3.06
321 322 1.280133 AGTACATGGCTGCACACATCT 59.720 47.619 0.50 0.00 0.00 2.90
322 323 2.501316 AGTACATGGCTGCACACATCTA 59.499 45.455 0.50 0.00 0.00 1.98
323 324 2.723322 ACATGGCTGCACACATCTAT 57.277 45.000 0.50 0.00 0.00 1.98
324 325 2.294979 ACATGGCTGCACACATCTATG 58.705 47.619 0.50 0.00 37.05 2.23
325 326 1.607148 CATGGCTGCACACATCTATGG 59.393 52.381 0.50 0.00 29.94 2.74
326 327 0.911053 TGGCTGCACACATCTATGGA 59.089 50.000 0.50 0.00 0.00 3.41
327 328 1.303309 GGCTGCACACATCTATGGAC 58.697 55.000 0.50 0.00 0.00 4.02
328 329 1.134280 GGCTGCACACATCTATGGACT 60.134 52.381 0.50 0.00 0.00 3.85
329 330 2.636830 GCTGCACACATCTATGGACTT 58.363 47.619 0.00 0.00 0.00 3.01
330 331 2.353889 GCTGCACACATCTATGGACTTG 59.646 50.000 0.00 0.00 0.00 3.16
331 332 2.353889 CTGCACACATCTATGGACTTGC 59.646 50.000 0.00 0.00 0.00 4.01
332 333 1.328680 GCACACATCTATGGACTTGCG 59.671 52.381 0.00 0.00 0.00 4.85
333 334 2.621338 CACACATCTATGGACTTGCGT 58.379 47.619 0.00 0.00 0.00 5.24
334 335 2.349580 CACACATCTATGGACTTGCGTG 59.650 50.000 0.00 0.00 0.00 5.34
335 336 1.328680 CACATCTATGGACTTGCGTGC 59.671 52.381 0.00 0.00 0.00 5.34
336 337 1.066215 ACATCTATGGACTTGCGTGCA 60.066 47.619 0.00 0.00 45.77 4.57
340 341 2.749682 TGGACTTGCGTGCATCCT 59.250 55.556 13.89 0.00 36.50 3.24
341 342 1.672030 TGGACTTGCGTGCATCCTG 60.672 57.895 13.89 0.97 36.50 3.86
342 343 2.401766 GGACTTGCGTGCATCCTGG 61.402 63.158 7.14 0.00 0.00 4.45
343 344 2.360350 ACTTGCGTGCATCCTGGG 60.360 61.111 0.00 0.00 0.00 4.45
344 345 3.818787 CTTGCGTGCATCCTGGGC 61.819 66.667 0.00 0.00 0.00 5.36
345 346 4.349503 TTGCGTGCATCCTGGGCT 62.350 61.111 0.00 0.00 0.00 5.19
346 347 3.866379 TTGCGTGCATCCTGGGCTT 62.866 57.895 0.00 0.00 0.00 4.35
347 348 3.818787 GCGTGCATCCTGGGCTTG 61.819 66.667 0.00 0.00 0.00 4.01
348 349 3.818787 CGTGCATCCTGGGCTTGC 61.819 66.667 9.35 9.35 36.91 4.01
349 350 3.818787 GTGCATCCTGGGCTTGCG 61.819 66.667 10.92 0.00 39.23 4.85
352 353 4.113815 CATCCTGGGCTTGCGGGA 62.114 66.667 0.00 0.00 0.00 5.14
353 354 3.801997 ATCCTGGGCTTGCGGGAG 61.802 66.667 0.00 0.00 0.00 4.30
361 362 4.335647 CTTGCGGGAGGCCACACT 62.336 66.667 5.01 0.00 42.61 3.55
362 363 4.329545 TTGCGGGAGGCCACACTC 62.330 66.667 5.01 0.00 42.61 3.51
364 365 4.101448 GCGGGAGGCCACACTCAT 62.101 66.667 5.01 0.00 39.27 2.90
365 366 2.124983 CGGGAGGCCACACTCATG 60.125 66.667 5.01 0.00 39.27 3.07
366 367 2.959484 CGGGAGGCCACACTCATGT 61.959 63.158 5.01 0.00 40.80 3.21
367 368 1.380302 GGGAGGCCACACTCATGTT 59.620 57.895 5.01 0.00 36.72 2.71
368 369 0.962356 GGGAGGCCACACTCATGTTG 60.962 60.000 5.01 0.00 36.72 3.33
369 370 1.589716 GGAGGCCACACTCATGTTGC 61.590 60.000 5.01 0.00 44.79 4.17
371 372 3.762293 GCCACACTCATGTTGCCA 58.238 55.556 0.00 0.00 40.74 4.92
372 373 2.040330 GCCACACTCATGTTGCCAA 58.960 52.632 0.00 0.00 40.74 4.52
373 374 0.388659 GCCACACTCATGTTGCCAAA 59.611 50.000 0.00 0.00 40.74 3.28
374 375 1.202510 GCCACACTCATGTTGCCAAAA 60.203 47.619 0.00 0.00 40.74 2.44
375 376 2.472816 CCACACTCATGTTGCCAAAAC 58.527 47.619 0.00 0.00 36.72 2.43
376 377 2.159128 CCACACTCATGTTGCCAAAACA 60.159 45.455 0.00 0.00 36.72 2.83
377 378 3.493002 CCACACTCATGTTGCCAAAACAT 60.493 43.478 0.00 0.00 41.18 2.71
378 379 3.737266 CACACTCATGTTGCCAAAACATC 59.263 43.478 0.82 0.00 38.69 3.06
379 380 3.638160 ACACTCATGTTGCCAAAACATCT 59.362 39.130 0.82 0.00 38.69 2.90
380 381 4.099881 ACACTCATGTTGCCAAAACATCTT 59.900 37.500 0.82 0.00 38.69 2.40
381 382 5.301551 ACACTCATGTTGCCAAAACATCTTA 59.698 36.000 0.82 0.00 38.69 2.10
382 383 5.630680 CACTCATGTTGCCAAAACATCTTAC 59.369 40.000 0.82 0.00 38.69 2.34
383 384 5.536161 ACTCATGTTGCCAAAACATCTTACT 59.464 36.000 0.82 0.00 38.69 2.24
384 385 5.771469 TCATGTTGCCAAAACATCTTACTG 58.229 37.500 0.82 0.00 38.69 2.74
385 386 5.534278 TCATGTTGCCAAAACATCTTACTGA 59.466 36.000 0.82 0.00 38.69 3.41
386 387 5.843673 TGTTGCCAAAACATCTTACTGAA 57.156 34.783 0.00 0.00 0.00 3.02
387 388 5.830912 TGTTGCCAAAACATCTTACTGAAG 58.169 37.500 0.00 0.00 0.00 3.02
388 389 4.503741 TGCCAAAACATCTTACTGAAGC 57.496 40.909 0.00 0.00 32.21 3.86
389 390 3.255642 TGCCAAAACATCTTACTGAAGCC 59.744 43.478 0.00 0.00 32.21 4.35
390 391 3.367395 GCCAAAACATCTTACTGAAGCCC 60.367 47.826 0.00 0.00 32.21 5.19
391 392 3.193479 CCAAAACATCTTACTGAAGCCCC 59.807 47.826 0.00 0.00 32.21 5.80
392 393 4.082125 CAAAACATCTTACTGAAGCCCCT 58.918 43.478 0.00 0.00 32.21 4.79
393 394 5.253330 CAAAACATCTTACTGAAGCCCCTA 58.747 41.667 0.00 0.00 32.21 3.53
394 395 5.514500 AAACATCTTACTGAAGCCCCTAA 57.486 39.130 0.00 0.00 32.21 2.69
405 406 1.382914 AGCCCCTAACCAATGGAACT 58.617 50.000 6.16 0.00 0.00 3.01
451 453 2.356313 CTGGCTCAACTGCGTCGT 60.356 61.111 0.00 0.00 0.00 4.34
485 487 1.134487 CGCACGATTTCACCGCAAT 59.866 52.632 0.00 0.00 0.00 3.56
530 532 4.159244 AGCCATAGCCGTTGGTTATTTA 57.841 40.909 0.00 0.00 41.25 1.40
536 538 6.262273 CCATAGCCGTTGGTTATTTATGACTT 59.738 38.462 0.00 0.00 26.55 3.01
602 604 3.044059 GCCCAGCATTCTCGTGTGC 62.044 63.158 0.00 0.00 41.57 4.57
625 627 0.531974 GTGTGCGTTCTGGGTGAGAA 60.532 55.000 0.00 0.00 38.45 2.87
684 689 0.327000 ACCTAGCAGCCAATCCCTCT 60.327 55.000 0.00 0.00 0.00 3.69
688 693 0.407139 AGCAGCCAATCCCTCTGTTT 59.593 50.000 0.00 0.00 0.00 2.83
697 702 0.251832 TCCCTCTGTTTCTCGAGCCT 60.252 55.000 7.81 0.00 0.00 4.58
753 758 4.421554 CCCTCCCTCTCCCCTGCA 62.422 72.222 0.00 0.00 0.00 4.41
754 759 3.086600 CCTCCCTCTCCCCTGCAC 61.087 72.222 0.00 0.00 0.00 4.57
758 763 3.465403 CCTCTCCCCTGCACCTCG 61.465 72.222 0.00 0.00 0.00 4.63
760 765 1.984570 CTCTCCCCTGCACCTCGAA 60.985 63.158 0.00 0.00 0.00 3.71
783 788 4.806339 CGCCTCCTTCCCTCCCCT 62.806 72.222 0.00 0.00 0.00 4.79
797 802 2.236395 CCTCCCCTTCGCTTCTTTCTAA 59.764 50.000 0.00 0.00 0.00 2.10
986 994 1.227060 CGCTGGCTCGTCATCATCA 60.227 57.895 0.00 0.00 0.00 3.07
1021 1029 1.195115 GCCTCTGTACATCCCTCACA 58.805 55.000 0.00 0.00 0.00 3.58
1049 1057 1.624312 GTTCCTCCTTCTTCCGTCCTT 59.376 52.381 0.00 0.00 0.00 3.36
1086 1094 2.689034 CCGCCCTTCCCTTCCTCT 60.689 66.667 0.00 0.00 0.00 3.69
1144 1152 1.448540 CGCCGGCTTCATTCTCTGT 60.449 57.895 26.68 0.00 0.00 3.41
1151 1159 2.099921 GGCTTCATTCTCTGTCGCTCTA 59.900 50.000 0.00 0.00 0.00 2.43
1157 1165 4.274705 TCATTCTCTGTCGCTCTACTCATC 59.725 45.833 0.00 0.00 0.00 2.92
1259 1267 2.362120 AGCAAGGATGGTGGCTGC 60.362 61.111 0.00 0.00 35.55 5.25
1365 1430 0.660595 AGCGACAACAGTTCGTCTCG 60.661 55.000 11.64 5.17 33.07 4.04
1700 1793 1.066573 CCTGCAGGTTCAGTGAGTAGG 60.067 57.143 25.53 0.00 32.32 3.18
1786 1879 9.832445 TGAGATATGGTCATTCTTAAAAGGTAC 57.168 33.333 0.00 0.00 0.00 3.34
1789 1882 9.274206 GATATGGTCATTCTTAAAAGGTACTCC 57.726 37.037 0.00 0.00 38.49 3.85
1790 1883 5.812286 TGGTCATTCTTAAAAGGTACTCCC 58.188 41.667 0.00 0.00 38.49 4.30
1792 1885 6.114089 GGTCATTCTTAAAAGGTACTCCCTC 58.886 44.000 0.00 0.00 45.47 4.30
1793 1886 6.114089 GTCATTCTTAAAAGGTACTCCCTCC 58.886 44.000 0.00 0.00 45.47 4.30
1794 1887 4.813750 TTCTTAAAAGGTACTCCCTCCG 57.186 45.455 0.00 0.00 45.47 4.63
1795 1888 3.782992 TCTTAAAAGGTACTCCCTCCGT 58.217 45.455 0.00 0.00 45.47 4.69
1796 1889 4.162651 TCTTAAAAGGTACTCCCTCCGTT 58.837 43.478 0.00 0.00 45.47 4.44
1797 1890 4.221482 TCTTAAAAGGTACTCCCTCCGTTC 59.779 45.833 0.00 0.00 45.47 3.95
1798 1891 0.893447 AAAGGTACTCCCTCCGTTCG 59.107 55.000 0.00 0.00 45.47 3.95
1799 1892 0.969409 AAGGTACTCCCTCCGTTCGG 60.969 60.000 4.74 4.74 45.47 4.30
1800 1893 1.379044 GGTACTCCCTCCGTTCGGA 60.379 63.158 13.34 13.34 0.00 4.55
1801 1894 0.967380 GGTACTCCCTCCGTTCGGAA 60.967 60.000 14.79 0.04 33.41 4.30
1802 1895 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
1803 1896 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
1804 1897 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1805 1898 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1806 1899 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1807 1900 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1808 1901 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1809 1902 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1810 1903 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1811 1904 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
1812 1905 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
1813 1906 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
1814 1907 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
1815 1908 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
1816 1909 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
1817 1910 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
1818 1911 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
1819 1912 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
1820 1913 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
1821 1914 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
1822 1915 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
1823 1916 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
1824 1917 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
1825 1918 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
1826 1919 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
1827 1920 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
1828 1921 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
1829 1922 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
1830 1923 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
1831 1924 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
1832 1925 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
1833 1926 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
1834 1927 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
1835 1928 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
1836 1929 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
1837 1930 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
1838 1931 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
1864 1957 6.603237 TGTTTAGATACATCCATTTCTGCG 57.397 37.500 0.00 0.00 0.00 5.18
1865 1958 6.345298 TGTTTAGATACATCCATTTCTGCGA 58.655 36.000 0.00 0.00 0.00 5.10
1866 1959 6.257849 TGTTTAGATACATCCATTTCTGCGAC 59.742 38.462 0.00 0.00 0.00 5.19
1867 1960 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
1868 1961 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
1869 1962 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
1870 1963 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
1871 1964 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
1872 1965 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
1873 1966 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
1874 1967 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
1875 1968 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
1876 1969 4.394920 TCCATTTCTGCGACAAGTAATTCC 59.605 41.667 0.00 0.00 0.00 3.01
1877 1970 4.334443 CATTTCTGCGACAAGTAATTCCG 58.666 43.478 0.00 0.00 0.00 4.30
1878 1971 3.306917 TTCTGCGACAAGTAATTCCGA 57.693 42.857 0.00 0.00 0.00 4.55
1879 1972 3.306917 TCTGCGACAAGTAATTCCGAA 57.693 42.857 0.00 0.00 0.00 4.30
1880 1973 2.991190 TCTGCGACAAGTAATTCCGAAC 59.009 45.455 0.00 0.00 0.00 3.95
1881 1974 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
1882 1975 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
1883 1976 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
1884 1977 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
1885 1978 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1886 1979 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1887 1980 0.828677 AGTAATTCCGAACGGAGGGG 59.171 55.000 15.34 0.00 46.06 4.79
1888 1981 0.179065 GTAATTCCGAACGGAGGGGG 60.179 60.000 15.34 0.00 46.06 5.40
1889 1982 0.618393 TAATTCCGAACGGAGGGGGT 60.618 55.000 15.34 4.31 46.06 4.95
1890 1983 0.618393 AATTCCGAACGGAGGGGGTA 60.618 55.000 15.34 1.05 46.06 3.69
2206 4093 5.520376 AAAGGAAGAAATGTGTTGTCAGG 57.480 39.130 0.00 0.00 0.00 3.86
2282 4169 7.670140 CCTACTATCTACACTCCATGGAATACA 59.330 40.741 17.00 0.74 0.00 2.29
2312 4199 7.309560 CCATTTTTAAACCGGTCCAGAAGTAAT 60.310 37.037 8.04 0.00 0.00 1.89
2369 4256 4.025313 GCATATTGCTCGACTCCTTTCTTC 60.025 45.833 0.00 0.00 40.96 2.87
2407 4294 3.559655 TGTGTGTCACTGCACTTAATGTC 59.440 43.478 4.27 0.00 39.89 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.462678 GAGGGGAGAGGGCGACAC 61.463 72.222 0.00 0.00 0.00 3.67
9 10 3.663815 GAGAGGGGAGAGGGCGACA 62.664 68.421 0.00 0.00 0.00 4.35
10 11 2.835895 GAGAGGGGAGAGGGCGAC 60.836 72.222 0.00 0.00 0.00 5.19
11 12 4.507916 CGAGAGGGGAGAGGGCGA 62.508 72.222 0.00 0.00 0.00 5.54
14 15 1.553690 TTTTGCGAGAGGGGAGAGGG 61.554 60.000 0.00 0.00 0.00 4.30
15 16 0.324943 TTTTTGCGAGAGGGGAGAGG 59.675 55.000 0.00 0.00 0.00 3.69
16 17 3.935993 TTTTTGCGAGAGGGGAGAG 57.064 52.632 0.00 0.00 0.00 3.20
31 32 7.535139 TCTCTCGACTTCATTGTTTTGTTTTT 58.465 30.769 0.00 0.00 0.00 1.94
32 33 7.083875 TCTCTCGACTTCATTGTTTTGTTTT 57.916 32.000 0.00 0.00 0.00 2.43
33 34 6.677781 TCTCTCGACTTCATTGTTTTGTTT 57.322 33.333 0.00 0.00 0.00 2.83
34 35 6.677781 TTCTCTCGACTTCATTGTTTTGTT 57.322 33.333 0.00 0.00 0.00 2.83
35 36 6.677781 TTTCTCTCGACTTCATTGTTTTGT 57.322 33.333 0.00 0.00 0.00 2.83
36 37 5.622856 GCTTTCTCTCGACTTCATTGTTTTG 59.377 40.000 0.00 0.00 0.00 2.44
37 38 5.296780 TGCTTTCTCTCGACTTCATTGTTTT 59.703 36.000 0.00 0.00 0.00 2.43
38 39 4.816385 TGCTTTCTCTCGACTTCATTGTTT 59.184 37.500 0.00 0.00 0.00 2.83
39 40 4.380531 TGCTTTCTCTCGACTTCATTGTT 58.619 39.130 0.00 0.00 0.00 2.83
40 41 3.995199 TGCTTTCTCTCGACTTCATTGT 58.005 40.909 0.00 0.00 0.00 2.71
41 42 4.997905 TTGCTTTCTCTCGACTTCATTG 57.002 40.909 0.00 0.00 0.00 2.82
42 43 5.760253 TCTTTTGCTTTCTCTCGACTTCATT 59.240 36.000 0.00 0.00 0.00 2.57
43 44 5.300752 TCTTTTGCTTTCTCTCGACTTCAT 58.699 37.500 0.00 0.00 0.00 2.57
44 45 4.693283 TCTTTTGCTTTCTCTCGACTTCA 58.307 39.130 0.00 0.00 0.00 3.02
45 46 5.333721 CCTTCTTTTGCTTTCTCTCGACTTC 60.334 44.000 0.00 0.00 0.00 3.01
46 47 4.513318 CCTTCTTTTGCTTTCTCTCGACTT 59.487 41.667 0.00 0.00 0.00 3.01
47 48 4.061596 CCTTCTTTTGCTTTCTCTCGACT 58.938 43.478 0.00 0.00 0.00 4.18
48 49 3.810386 ACCTTCTTTTGCTTTCTCTCGAC 59.190 43.478 0.00 0.00 0.00 4.20
49 50 4.058817 GACCTTCTTTTGCTTTCTCTCGA 58.941 43.478 0.00 0.00 0.00 4.04
50 51 3.809832 TGACCTTCTTTTGCTTTCTCTCG 59.190 43.478 0.00 0.00 0.00 4.04
51 52 5.956068 ATGACCTTCTTTTGCTTTCTCTC 57.044 39.130 0.00 0.00 0.00 3.20
52 53 6.322201 TGAAATGACCTTCTTTTGCTTTCTCT 59.678 34.615 0.00 0.00 0.00 3.10
53 54 6.507023 TGAAATGACCTTCTTTTGCTTTCTC 58.493 36.000 0.00 0.00 0.00 2.87
54 55 6.322201 TCTGAAATGACCTTCTTTTGCTTTCT 59.678 34.615 0.00 0.00 0.00 2.52
55 56 6.507023 TCTGAAATGACCTTCTTTTGCTTTC 58.493 36.000 0.00 0.00 0.00 2.62
56 57 6.469782 TCTGAAATGACCTTCTTTTGCTTT 57.530 33.333 0.00 0.00 0.00 3.51
57 58 6.661304 ATCTGAAATGACCTTCTTTTGCTT 57.339 33.333 0.00 0.00 0.00 3.91
58 59 6.661304 AATCTGAAATGACCTTCTTTTGCT 57.339 33.333 0.00 0.00 0.00 3.91
59 60 6.367149 GGAAATCTGAAATGACCTTCTTTTGC 59.633 38.462 0.00 0.00 0.00 3.68
60 61 7.664758 AGGAAATCTGAAATGACCTTCTTTTG 58.335 34.615 0.00 0.00 0.00 2.44
61 62 7.039434 GGAGGAAATCTGAAATGACCTTCTTTT 60.039 37.037 0.00 0.00 0.00 2.27
62 63 6.435591 GGAGGAAATCTGAAATGACCTTCTTT 59.564 38.462 0.00 0.00 0.00 2.52
63 64 5.948758 GGAGGAAATCTGAAATGACCTTCTT 59.051 40.000 0.00 0.00 0.00 2.52
64 65 5.504853 GGAGGAAATCTGAAATGACCTTCT 58.495 41.667 0.00 0.00 0.00 2.85
65 66 4.642437 GGGAGGAAATCTGAAATGACCTTC 59.358 45.833 0.00 0.00 0.00 3.46
66 67 4.293368 AGGGAGGAAATCTGAAATGACCTT 59.707 41.667 0.00 0.00 0.00 3.50
67 68 3.854994 AGGGAGGAAATCTGAAATGACCT 59.145 43.478 0.00 0.00 0.00 3.85
68 69 3.950395 CAGGGAGGAAATCTGAAATGACC 59.050 47.826 0.00 0.00 0.00 4.02
69 70 4.593956 ACAGGGAGGAAATCTGAAATGAC 58.406 43.478 0.00 0.00 33.19 3.06
70 71 4.324563 GGACAGGGAGGAAATCTGAAATGA 60.325 45.833 0.00 0.00 33.19 2.57
71 72 3.950395 GGACAGGGAGGAAATCTGAAATG 59.050 47.826 0.00 0.00 33.19 2.32
72 73 3.053320 GGGACAGGGAGGAAATCTGAAAT 60.053 47.826 0.00 0.00 33.19 2.17
73 74 2.308866 GGGACAGGGAGGAAATCTGAAA 59.691 50.000 0.00 0.00 33.19 2.69
74 75 1.916181 GGGACAGGGAGGAAATCTGAA 59.084 52.381 0.00 0.00 33.19 3.02
75 76 1.584724 GGGACAGGGAGGAAATCTGA 58.415 55.000 0.00 0.00 33.19 3.27
76 77 0.548510 GGGGACAGGGAGGAAATCTG 59.451 60.000 0.00 0.00 34.91 2.90
77 78 0.121197 TGGGGACAGGGAGGAAATCT 59.879 55.000 0.00 0.00 35.01 2.40
78 79 2.709992 TGGGGACAGGGAGGAAATC 58.290 57.895 0.00 0.00 35.01 2.17
90 91 3.195698 GAGAACGCGCATGGGGAC 61.196 66.667 5.73 0.00 0.00 4.46
91 92 2.535485 AATGAGAACGCGCATGGGGA 62.535 55.000 5.73 0.00 34.63 4.81
92 93 1.656818 AAATGAGAACGCGCATGGGG 61.657 55.000 5.73 4.42 34.63 4.96
93 94 0.523968 CAAATGAGAACGCGCATGGG 60.524 55.000 5.73 5.19 34.63 4.00
94 95 0.447406 TCAAATGAGAACGCGCATGG 59.553 50.000 5.73 0.00 34.63 3.66
95 96 2.463553 ATCAAATGAGAACGCGCATG 57.536 45.000 5.73 0.00 34.63 4.06
96 97 2.679837 AGAATCAAATGAGAACGCGCAT 59.320 40.909 5.73 0.00 35.99 4.73
97 98 2.076100 AGAATCAAATGAGAACGCGCA 58.924 42.857 5.73 0.00 0.00 6.09
98 99 2.349886 AGAGAATCAAATGAGAACGCGC 59.650 45.455 5.73 0.00 37.82 6.86
99 100 4.590400 AAGAGAATCAAATGAGAACGCG 57.410 40.909 3.53 3.53 37.82 6.01
120 121 0.889186 GGCGCTCACTCCTGGAAAAA 60.889 55.000 7.64 0.00 0.00 1.94
121 122 1.302511 GGCGCTCACTCCTGGAAAA 60.303 57.895 7.64 0.00 0.00 2.29
122 123 2.347490 GGCGCTCACTCCTGGAAA 59.653 61.111 7.64 0.00 0.00 3.13
123 124 3.706373 GGGCGCTCACTCCTGGAA 61.706 66.667 7.64 0.00 0.00 3.53
125 126 4.767255 GTGGGCGCTCACTCCTGG 62.767 72.222 32.80 0.00 34.98 4.45
126 127 2.809861 AATGTGGGCGCTCACTCCTG 62.810 60.000 37.88 0.00 38.40 3.86
127 128 2.129555 AAATGTGGGCGCTCACTCCT 62.130 55.000 37.88 21.39 38.40 3.69
128 129 1.675641 AAATGTGGGCGCTCACTCC 60.676 57.895 37.88 15.83 38.40 3.85
129 130 0.955428 TCAAATGTGGGCGCTCACTC 60.955 55.000 37.88 16.63 38.40 3.51
130 131 0.322816 ATCAAATGTGGGCGCTCACT 60.323 50.000 37.88 22.29 38.40 3.41
131 132 0.527565 AATCAAATGTGGGCGCTCAC 59.472 50.000 33.37 33.37 38.09 3.51
132 133 0.810648 GAATCAAATGTGGGCGCTCA 59.189 50.000 5.44 5.44 0.00 4.26
133 134 1.098050 AGAATCAAATGTGGGCGCTC 58.902 50.000 7.64 2.47 0.00 5.03
134 135 0.813184 CAGAATCAAATGTGGGCGCT 59.187 50.000 7.64 0.00 0.00 5.92
135 136 0.179129 CCAGAATCAAATGTGGGCGC 60.179 55.000 0.00 0.00 0.00 6.53
136 137 1.176527 ACCAGAATCAAATGTGGGCG 58.823 50.000 0.00 0.00 34.07 6.13
137 138 3.356290 AGTACCAGAATCAAATGTGGGC 58.644 45.455 0.00 0.00 34.07 5.36
138 139 3.623060 CGAGTACCAGAATCAAATGTGGG 59.377 47.826 0.00 0.00 34.07 4.61
139 140 4.330074 GTCGAGTACCAGAATCAAATGTGG 59.670 45.833 0.00 0.00 36.05 4.17
140 141 4.929211 TGTCGAGTACCAGAATCAAATGTG 59.071 41.667 0.00 0.00 0.00 3.21
141 142 4.929808 GTGTCGAGTACCAGAATCAAATGT 59.070 41.667 0.00 0.00 0.00 2.71
142 143 5.062683 CAGTGTCGAGTACCAGAATCAAATG 59.937 44.000 0.00 0.00 0.00 2.32
143 144 5.047306 TCAGTGTCGAGTACCAGAATCAAAT 60.047 40.000 0.00 0.00 0.00 2.32
144 145 4.279922 TCAGTGTCGAGTACCAGAATCAAA 59.720 41.667 0.00 0.00 0.00 2.69
145 146 3.824443 TCAGTGTCGAGTACCAGAATCAA 59.176 43.478 0.00 0.00 0.00 2.57
146 147 3.190744 GTCAGTGTCGAGTACCAGAATCA 59.809 47.826 0.00 0.00 0.00 2.57
147 148 3.728268 CGTCAGTGTCGAGTACCAGAATC 60.728 52.174 3.55 0.00 0.00 2.52
148 149 2.161808 CGTCAGTGTCGAGTACCAGAAT 59.838 50.000 3.55 0.00 0.00 2.40
149 150 1.534163 CGTCAGTGTCGAGTACCAGAA 59.466 52.381 3.55 0.00 0.00 3.02
150 151 1.154197 CGTCAGTGTCGAGTACCAGA 58.846 55.000 3.55 0.00 0.00 3.86
151 152 0.454620 GCGTCAGTGTCGAGTACCAG 60.455 60.000 14.00 0.00 0.00 4.00
152 153 1.167781 TGCGTCAGTGTCGAGTACCA 61.168 55.000 14.00 0.00 0.00 3.25
153 154 0.728466 GTGCGTCAGTGTCGAGTACC 60.728 60.000 14.00 0.00 0.00 3.34
154 155 0.040692 TGTGCGTCAGTGTCGAGTAC 60.041 55.000 14.00 9.07 0.00 2.73
155 156 0.040692 GTGTGCGTCAGTGTCGAGTA 60.041 55.000 14.00 0.00 0.00 2.59
156 157 1.299165 GTGTGCGTCAGTGTCGAGT 60.299 57.895 14.00 0.00 0.00 4.18
157 158 2.357543 CGTGTGCGTCAGTGTCGAG 61.358 63.158 14.00 0.00 0.00 4.04
158 159 2.353030 CGTGTGCGTCAGTGTCGA 60.353 61.111 14.00 0.00 0.00 4.20
168 169 1.654137 GGCAGTTGAAACGTGTGCG 60.654 57.895 0.00 0.00 44.93 5.34
169 170 0.865639 GTGGCAGTTGAAACGTGTGC 60.866 55.000 0.00 0.00 0.00 4.57
170 171 0.449786 TGTGGCAGTTGAAACGTGTG 59.550 50.000 0.00 0.00 0.00 3.82
171 172 1.388547 ATGTGGCAGTTGAAACGTGT 58.611 45.000 0.00 0.00 0.00 4.49
172 173 2.289274 TGTATGTGGCAGTTGAAACGTG 59.711 45.455 0.00 0.00 0.00 4.49
173 174 2.566913 TGTATGTGGCAGTTGAAACGT 58.433 42.857 0.00 0.00 0.00 3.99
174 175 3.058293 ACATGTATGTGGCAGTTGAAACG 60.058 43.478 0.00 0.00 40.03 3.60
175 176 4.475944 GACATGTATGTGGCAGTTGAAAC 58.524 43.478 0.00 0.00 41.95 2.78
176 177 3.505680 GGACATGTATGTGGCAGTTGAAA 59.494 43.478 0.00 0.00 41.95 2.69
177 178 3.081061 GGACATGTATGTGGCAGTTGAA 58.919 45.455 0.00 0.00 41.95 2.69
178 179 2.039613 TGGACATGTATGTGGCAGTTGA 59.960 45.455 0.00 0.00 41.95 3.18
179 180 2.162208 GTGGACATGTATGTGGCAGTTG 59.838 50.000 0.00 0.00 41.95 3.16
180 181 2.040278 AGTGGACATGTATGTGGCAGTT 59.960 45.455 0.00 0.00 41.95 3.16
181 182 1.630369 AGTGGACATGTATGTGGCAGT 59.370 47.619 0.00 0.00 41.95 4.40
182 183 2.408271 AGTGGACATGTATGTGGCAG 57.592 50.000 0.00 0.00 41.95 4.85
183 184 2.837591 AGTAGTGGACATGTATGTGGCA 59.162 45.455 0.00 0.00 41.95 4.92
184 185 3.458189 GAGTAGTGGACATGTATGTGGC 58.542 50.000 0.00 0.00 41.95 5.01
185 186 3.181465 GGGAGTAGTGGACATGTATGTGG 60.181 52.174 0.00 0.00 41.95 4.17
186 187 3.706594 AGGGAGTAGTGGACATGTATGTG 59.293 47.826 0.00 0.00 41.95 3.21
187 188 3.961408 GAGGGAGTAGTGGACATGTATGT 59.039 47.826 0.00 0.00 45.16 2.29
188 189 3.004839 CGAGGGAGTAGTGGACATGTATG 59.995 52.174 0.00 0.00 0.00 2.39
189 190 3.223435 CGAGGGAGTAGTGGACATGTAT 58.777 50.000 0.00 0.00 0.00 2.29
190 191 2.025605 ACGAGGGAGTAGTGGACATGTA 60.026 50.000 0.00 0.00 0.00 2.29
191 192 1.272536 ACGAGGGAGTAGTGGACATGT 60.273 52.381 0.00 0.00 0.00 3.21
192 193 1.475403 ACGAGGGAGTAGTGGACATG 58.525 55.000 0.00 0.00 0.00 3.21
193 194 2.100989 GAACGAGGGAGTAGTGGACAT 58.899 52.381 0.00 0.00 0.00 3.06
194 195 1.542492 GAACGAGGGAGTAGTGGACA 58.458 55.000 0.00 0.00 0.00 4.02
195 196 0.816373 GGAACGAGGGAGTAGTGGAC 59.184 60.000 0.00 0.00 0.00 4.02
196 197 3.277962 GGAACGAGGGAGTAGTGGA 57.722 57.895 0.00 0.00 0.00 4.02
241 242 8.830580 CAAATTACTCGTCACAGAAATGGATAT 58.169 33.333 0.00 0.00 0.00 1.63
242 243 8.038351 TCAAATTACTCGTCACAGAAATGGATA 58.962 33.333 0.00 0.00 0.00 2.59
243 244 6.878923 TCAAATTACTCGTCACAGAAATGGAT 59.121 34.615 0.00 0.00 0.00 3.41
244 245 6.227522 TCAAATTACTCGTCACAGAAATGGA 58.772 36.000 0.00 0.00 0.00 3.41
245 246 6.480524 TCAAATTACTCGTCACAGAAATGG 57.519 37.500 0.00 0.00 0.00 3.16
246 247 7.058354 CGTTTCAAATTACTCGTCACAGAAATG 59.942 37.037 0.00 0.00 0.00 2.32
247 248 7.069569 CGTTTCAAATTACTCGTCACAGAAAT 58.930 34.615 0.00 0.00 0.00 2.17
248 249 6.415702 CGTTTCAAATTACTCGTCACAGAAA 58.584 36.000 0.00 0.00 0.00 2.52
249 250 5.050634 CCGTTTCAAATTACTCGTCACAGAA 60.051 40.000 0.00 0.00 0.00 3.02
250 251 4.446385 CCGTTTCAAATTACTCGTCACAGA 59.554 41.667 0.00 0.00 0.00 3.41
251 252 4.446385 TCCGTTTCAAATTACTCGTCACAG 59.554 41.667 0.00 0.00 0.00 3.66
252 253 4.370049 TCCGTTTCAAATTACTCGTCACA 58.630 39.130 0.00 0.00 0.00 3.58
253 254 4.143179 CCTCCGTTTCAAATTACTCGTCAC 60.143 45.833 0.00 0.00 0.00 3.67
254 255 3.991773 CCTCCGTTTCAAATTACTCGTCA 59.008 43.478 0.00 0.00 0.00 4.35
255 256 4.240096 TCCTCCGTTTCAAATTACTCGTC 58.760 43.478 0.00 0.00 0.00 4.20
256 257 4.261578 TCCTCCGTTTCAAATTACTCGT 57.738 40.909 0.00 0.00 0.00 4.18
257 258 4.689345 ACTTCCTCCGTTTCAAATTACTCG 59.311 41.667 0.00 0.00 0.00 4.18
258 259 6.872547 AGTACTTCCTCCGTTTCAAATTACTC 59.127 38.462 0.00 0.00 0.00 2.59
259 260 6.766429 AGTACTTCCTCCGTTTCAAATTACT 58.234 36.000 0.00 0.00 0.00 2.24
260 261 8.438513 GTTAGTACTTCCTCCGTTTCAAATTAC 58.561 37.037 0.00 0.00 0.00 1.89
261 262 8.370182 AGTTAGTACTTCCTCCGTTTCAAATTA 58.630 33.333 0.00 0.00 0.00 1.40
262 263 7.222161 AGTTAGTACTTCCTCCGTTTCAAATT 58.778 34.615 0.00 0.00 0.00 1.82
263 264 6.766429 AGTTAGTACTTCCTCCGTTTCAAAT 58.234 36.000 0.00 0.00 0.00 2.32
264 265 6.165700 AGTTAGTACTTCCTCCGTTTCAAA 57.834 37.500 0.00 0.00 0.00 2.69
265 266 5.796424 AGTTAGTACTTCCTCCGTTTCAA 57.204 39.130 0.00 0.00 0.00 2.69
266 267 5.796424 AAGTTAGTACTTCCTCCGTTTCA 57.204 39.130 0.00 0.00 40.60 2.69
267 268 7.318893 ACATAAGTTAGTACTTCCTCCGTTTC 58.681 38.462 0.00 0.00 43.45 2.78
268 269 7.237209 ACATAAGTTAGTACTTCCTCCGTTT 57.763 36.000 0.00 0.00 43.45 3.60
269 270 6.847421 ACATAAGTTAGTACTTCCTCCGTT 57.153 37.500 0.00 0.00 43.45 4.44
270 271 7.944729 TTACATAAGTTAGTACTTCCTCCGT 57.055 36.000 0.00 0.00 43.45 4.69
271 272 7.866393 CCATTACATAAGTTAGTACTTCCTCCG 59.134 40.741 0.00 0.00 43.45 4.63
272 273 8.702819 ACCATTACATAAGTTAGTACTTCCTCC 58.297 37.037 0.00 0.00 43.45 4.30
284 285 7.497909 GCCATGTACTGTACCATTACATAAGTT 59.502 37.037 14.91 0.00 37.86 2.66
285 286 6.990349 GCCATGTACTGTACCATTACATAAGT 59.010 38.462 14.91 0.00 37.86 2.24
286 287 7.171508 CAGCCATGTACTGTACCATTACATAAG 59.828 40.741 14.91 6.93 37.86 1.73
287 288 6.989759 CAGCCATGTACTGTACCATTACATAA 59.010 38.462 14.91 0.00 37.86 1.90
288 289 6.521162 CAGCCATGTACTGTACCATTACATA 58.479 40.000 14.91 0.00 37.86 2.29
289 290 5.368145 CAGCCATGTACTGTACCATTACAT 58.632 41.667 14.91 0.88 39.59 2.29
290 291 4.765273 CAGCCATGTACTGTACCATTACA 58.235 43.478 14.91 0.00 34.84 2.41
291 292 3.560068 GCAGCCATGTACTGTACCATTAC 59.440 47.826 14.91 1.99 37.47 1.89
292 293 3.198853 TGCAGCCATGTACTGTACCATTA 59.801 43.478 14.91 0.00 37.47 1.90
293 294 2.026356 TGCAGCCATGTACTGTACCATT 60.026 45.455 14.91 0.00 37.47 3.16
294 295 1.559219 TGCAGCCATGTACTGTACCAT 59.441 47.619 14.91 6.34 37.47 3.55
295 296 0.980423 TGCAGCCATGTACTGTACCA 59.020 50.000 14.91 4.34 37.47 3.25
296 297 1.338674 TGTGCAGCCATGTACTGTACC 60.339 52.381 22.59 11.38 46.41 3.34
297 298 1.732259 GTGTGCAGCCATGTACTGTAC 59.268 52.381 20.28 20.28 46.92 2.90
298 299 1.346068 TGTGTGCAGCCATGTACTGTA 59.654 47.619 12.93 7.14 42.05 2.74
299 300 0.108396 TGTGTGCAGCCATGTACTGT 59.892 50.000 12.93 0.00 42.05 3.55
300 301 1.399440 GATGTGTGCAGCCATGTACTG 59.601 52.381 8.29 8.29 42.05 2.74
301 302 1.280133 AGATGTGTGCAGCCATGTACT 59.720 47.619 2.88 0.00 42.05 2.73
302 303 1.742761 AGATGTGTGCAGCCATGTAC 58.257 50.000 2.88 0.00 41.91 2.90
303 304 3.469739 CATAGATGTGTGCAGCCATGTA 58.530 45.455 2.88 4.20 0.00 2.29
304 305 2.294979 CATAGATGTGTGCAGCCATGT 58.705 47.619 2.88 2.13 0.00 3.21
305 306 1.607148 CCATAGATGTGTGCAGCCATG 59.393 52.381 2.88 0.00 0.00 3.66
306 307 1.491754 TCCATAGATGTGTGCAGCCAT 59.508 47.619 0.00 0.00 0.00 4.40
307 308 0.911053 TCCATAGATGTGTGCAGCCA 59.089 50.000 0.00 0.00 0.00 4.75
308 309 1.134280 AGTCCATAGATGTGTGCAGCC 60.134 52.381 0.00 0.00 0.00 4.85
309 310 2.322355 AGTCCATAGATGTGTGCAGC 57.678 50.000 0.00 0.00 0.00 5.25
310 311 2.353889 GCAAGTCCATAGATGTGTGCAG 59.646 50.000 0.00 0.00 0.00 4.41
311 312 2.358957 GCAAGTCCATAGATGTGTGCA 58.641 47.619 0.00 0.00 0.00 4.57
312 313 1.328680 CGCAAGTCCATAGATGTGTGC 59.671 52.381 0.00 0.00 0.00 4.57
327 328 3.818787 GCCCAGGATGCACGCAAG 61.819 66.667 0.00 0.00 38.19 4.01
328 329 3.866379 AAGCCCAGGATGCACGCAA 62.866 57.895 0.00 0.00 31.97 4.85
329 330 4.349503 AAGCCCAGGATGCACGCA 62.350 61.111 0.00 0.00 31.97 5.24
330 331 3.818787 CAAGCCCAGGATGCACGC 61.819 66.667 0.00 0.00 31.97 5.34
331 332 3.818787 GCAAGCCCAGGATGCACG 61.819 66.667 9.31 0.00 39.81 5.34
332 333 3.818787 CGCAAGCCCAGGATGCAC 61.819 66.667 13.27 0.00 40.04 4.57
335 336 4.113815 TCCCGCAAGCCCAGGATG 62.114 66.667 0.00 0.00 0.00 3.51
336 337 3.801997 CTCCCGCAAGCCCAGGAT 61.802 66.667 0.00 0.00 0.00 3.24
347 348 4.101448 ATGAGTGTGGCCTCCCGC 62.101 66.667 3.32 0.00 42.13 6.13
348 349 2.124983 CATGAGTGTGGCCTCCCG 60.125 66.667 3.32 0.00 0.00 5.14
349 350 0.962356 CAACATGAGTGTGGCCTCCC 60.962 60.000 3.32 0.00 38.92 4.30
350 351 2.559785 CAACATGAGTGTGGCCTCC 58.440 57.895 3.32 0.00 38.92 4.30
361 362 7.735215 CTTCAGTAAGATGTTTTGGCAACATGA 60.735 37.037 9.43 0.00 40.23 3.07
362 363 6.364165 CTTCAGTAAGATGTTTTGGCAACATG 59.636 38.462 9.43 0.00 40.23 3.21
363 364 6.449698 CTTCAGTAAGATGTTTTGGCAACAT 58.550 36.000 0.00 1.05 40.23 2.71
364 365 5.735922 GCTTCAGTAAGATGTTTTGGCAACA 60.736 40.000 0.00 0.00 39.18 3.33
365 366 4.681483 GCTTCAGTAAGATGTTTTGGCAAC 59.319 41.667 0.00 0.00 34.37 4.17
366 367 4.261994 GGCTTCAGTAAGATGTTTTGGCAA 60.262 41.667 0.00 0.00 34.37 4.52
367 368 3.255642 GGCTTCAGTAAGATGTTTTGGCA 59.744 43.478 0.00 0.00 34.37 4.92
368 369 3.367395 GGGCTTCAGTAAGATGTTTTGGC 60.367 47.826 0.00 0.00 34.37 4.52
369 370 3.193479 GGGGCTTCAGTAAGATGTTTTGG 59.807 47.826 0.00 0.00 34.37 3.28
370 371 4.082125 AGGGGCTTCAGTAAGATGTTTTG 58.918 43.478 0.00 0.00 34.37 2.44
371 372 4.388577 AGGGGCTTCAGTAAGATGTTTT 57.611 40.909 0.00 0.00 34.37 2.43
372 373 5.254115 GTTAGGGGCTTCAGTAAGATGTTT 58.746 41.667 0.00 0.00 34.37 2.83
373 374 4.324331 GGTTAGGGGCTTCAGTAAGATGTT 60.324 45.833 0.00 0.00 34.37 2.71
374 375 3.200165 GGTTAGGGGCTTCAGTAAGATGT 59.800 47.826 0.00 0.00 34.37 3.06
375 376 3.199946 TGGTTAGGGGCTTCAGTAAGATG 59.800 47.826 0.00 0.00 34.37 2.90
376 377 3.460825 TGGTTAGGGGCTTCAGTAAGAT 58.539 45.455 0.00 0.00 34.37 2.40
377 378 2.910544 TGGTTAGGGGCTTCAGTAAGA 58.089 47.619 0.00 0.00 34.37 2.10
378 379 3.713826 TTGGTTAGGGGCTTCAGTAAG 57.286 47.619 0.00 0.00 35.68 2.34
379 380 3.308832 CCATTGGTTAGGGGCTTCAGTAA 60.309 47.826 0.00 0.00 0.00 2.24
380 381 2.241176 CCATTGGTTAGGGGCTTCAGTA 59.759 50.000 0.00 0.00 0.00 2.74
381 382 1.005924 CCATTGGTTAGGGGCTTCAGT 59.994 52.381 0.00 0.00 0.00 3.41
382 383 1.284785 TCCATTGGTTAGGGGCTTCAG 59.715 52.381 1.86 0.00 0.00 3.02
383 384 1.377690 TCCATTGGTTAGGGGCTTCA 58.622 50.000 1.86 0.00 0.00 3.02
384 385 2.100197 GTTCCATTGGTTAGGGGCTTC 58.900 52.381 1.86 0.00 0.00 3.86
385 386 1.716503 AGTTCCATTGGTTAGGGGCTT 59.283 47.619 1.86 0.00 0.00 4.35
386 387 1.382914 AGTTCCATTGGTTAGGGGCT 58.617 50.000 1.86 0.00 0.00 5.19
387 388 2.231716 AAGTTCCATTGGTTAGGGGC 57.768 50.000 1.86 0.00 0.00 5.80
388 389 7.397761 TGTTTTATAAGTTCCATTGGTTAGGGG 59.602 37.037 1.86 0.00 0.00 4.79
389 390 8.248253 GTGTTTTATAAGTTCCATTGGTTAGGG 58.752 37.037 1.86 0.00 0.00 3.53
390 391 7.966204 CGTGTTTTATAAGTTCCATTGGTTAGG 59.034 37.037 1.86 0.00 0.00 2.69
391 392 7.483691 GCGTGTTTTATAAGTTCCATTGGTTAG 59.516 37.037 1.86 0.00 0.00 2.34
392 393 7.175293 AGCGTGTTTTATAAGTTCCATTGGTTA 59.825 33.333 1.86 0.00 0.00 2.85
393 394 6.015772 AGCGTGTTTTATAAGTTCCATTGGTT 60.016 34.615 1.86 0.00 0.00 3.67
394 395 5.475564 AGCGTGTTTTATAAGTTCCATTGGT 59.524 36.000 1.86 0.00 0.00 3.67
438 440 3.030308 ACGCACGACGCAGTTGAG 61.030 61.111 0.00 0.00 47.00 3.02
451 453 3.334751 CGAACCAGAACGCACGCA 61.335 61.111 0.00 0.00 0.00 5.24
513 515 7.875327 AAAGTCATAAATAACCAACGGCTAT 57.125 32.000 0.00 0.00 0.00 2.97
536 538 7.306283 CCGTCATGCAATAAAACGAAAGAAAAA 60.306 33.333 10.10 0.00 0.00 1.94
581 583 3.329889 ACGAGAATGCTGGGCCCA 61.330 61.111 26.67 26.67 0.00 5.36
602 604 1.600636 ACCCAGAACGCACACATGG 60.601 57.895 0.00 0.00 0.00 3.66
625 627 2.290705 CCATACCCACGTCTCCCTTTTT 60.291 50.000 0.00 0.00 0.00 1.94
629 631 0.264955 ATCCATACCCACGTCTCCCT 59.735 55.000 0.00 0.00 0.00 4.20
642 644 0.177836 CACCACCAGCACGATCCATA 59.822 55.000 0.00 0.00 0.00 2.74
684 689 2.261671 GGCGAGGCTCGAGAAACA 59.738 61.111 38.56 0.00 43.74 2.83
758 763 3.577313 GAAGGAGGCGGCGCATTC 61.577 66.667 34.36 27.00 0.00 2.67
767 772 2.286502 AAGGGGAGGGAAGGAGGC 60.287 66.667 0.00 0.00 0.00 4.70
774 779 0.840722 AAAGAAGCGAAGGGGAGGGA 60.841 55.000 0.00 0.00 0.00 4.20
776 781 0.615850 AGAAAGAAGCGAAGGGGAGG 59.384 55.000 0.00 0.00 0.00 4.30
778 783 2.236395 CCTTAGAAAGAAGCGAAGGGGA 59.764 50.000 0.00 0.00 35.34 4.81
781 786 1.661112 CGCCTTAGAAAGAAGCGAAGG 59.339 52.381 0.00 0.00 40.00 3.46
782 787 1.661112 CCGCCTTAGAAAGAAGCGAAG 59.339 52.381 4.01 0.00 31.76 3.79
783 788 1.722011 CCGCCTTAGAAAGAAGCGAA 58.278 50.000 4.01 0.00 31.76 4.70
812 820 2.912025 CCGTTGCCCTTTGCCTGT 60.912 61.111 0.00 0.00 40.16 4.00
825 833 2.467946 AATCGAGTGTCGTCGCCGTT 62.468 55.000 0.00 0.00 41.35 4.44
832 840 2.263077 GCAGATCAAATCGAGTGTCGT 58.737 47.619 0.00 0.00 41.35 4.34
835 843 3.865446 TCATGCAGATCAAATCGAGTGT 58.135 40.909 0.00 0.00 0.00 3.55
837 845 4.397481 TCTCATGCAGATCAAATCGAGT 57.603 40.909 0.00 0.00 0.00 4.18
980 988 1.039068 CTCTCCTCCAGCGTGATGAT 58.961 55.000 0.00 0.00 0.00 2.45
986 994 2.430610 GGCATCTCTCCTCCAGCGT 61.431 63.158 0.00 0.00 0.00 5.07
1086 1094 2.524394 GCTGGAGGGGCGGAGATA 60.524 66.667 0.00 0.00 0.00 1.98
1144 1152 2.543802 CGGCCGATGAGTAGAGCGA 61.544 63.158 24.07 0.00 0.00 4.93
1151 1159 4.194720 GAGCGACGGCCGATGAGT 62.195 66.667 35.90 9.07 41.76 3.41
1177 1185 2.818132 GGTGGCAGATCCTCCTCG 59.182 66.667 0.00 0.00 43.58 4.63
1365 1430 0.467804 GGAGGAGCAGAAGGATCACC 59.532 60.000 0.00 0.00 32.12 4.02
1451 1520 8.025445 ACAGTGAAGAAAAATGAGAATGTATGC 58.975 33.333 0.00 0.00 0.00 3.14
1700 1793 8.942338 TCAACAGTAGTCATTATACATGTTCC 57.058 34.615 2.30 0.00 29.78 3.62
1786 1879 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1787 1880 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1788 1881 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1789 1882 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1790 1883 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
1791 1884 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
1792 1885 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
1793 1886 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
1794 1887 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
1795 1888 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
1796 1889 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
1797 1890 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
1798 1891 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
1799 1892 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
1800 1893 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
1801 1894 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
1802 1895 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
1803 1896 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
1804 1897 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
1805 1898 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
1806 1899 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
1807 1900 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
1808 1901 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
1809 1902 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
1810 1903 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
1811 1904 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
1812 1905 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
1838 1931 8.939929 CGCAGAAATGGATGTATCTAAACATAT 58.060 33.333 0.00 0.00 40.17 1.78
1839 1932 8.147704 TCGCAGAAATGGATGTATCTAAACATA 58.852 33.333 0.00 0.00 40.17 2.29
1840 1933 6.992123 TCGCAGAAATGGATGTATCTAAACAT 59.008 34.615 0.00 0.00 42.75 2.71
1841 1934 6.257849 GTCGCAGAAATGGATGTATCTAAACA 59.742 38.462 0.00 0.00 39.69 2.83
1842 1935 6.257849 TGTCGCAGAAATGGATGTATCTAAAC 59.742 38.462 0.00 0.00 39.69 2.01
1843 1936 6.345298 TGTCGCAGAAATGGATGTATCTAAA 58.655 36.000 0.00 0.00 39.69 1.85
1844 1937 5.912892 TGTCGCAGAAATGGATGTATCTAA 58.087 37.500 0.00 0.00 39.69 2.10
1845 1938 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
1846 1939 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
1847 1940 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
1848 1941 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
1849 1942 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
1850 1943 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
1851 1944 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
1852 1945 5.066505 GGAATTACTTGTCGCAGAAATGGAT 59.933 40.000 0.00 0.00 39.69 3.41
1853 1946 4.394920 GGAATTACTTGTCGCAGAAATGGA 59.605 41.667 0.00 0.00 39.69 3.41
1854 1947 4.662145 GGAATTACTTGTCGCAGAAATGG 58.338 43.478 0.00 0.00 39.69 3.16
1855 1948 4.092821 TCGGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
1856 1949 4.250464 TCGGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
1857 1950 3.655486 TCGGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
1858 1951 3.306917 TCGGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
1859 1952 2.991190 GTTCGGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
1860 1953 2.222508 CGTTCGGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
1861 1954 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
1862 1955 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
1863 1956 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
1864 1957 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1865 1958 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1866 1959 2.277084 CCCTCCGTTCGGAATTACTTG 58.723 52.381 14.79 1.97 33.41 3.16
1867 1960 1.208776 CCCCTCCGTTCGGAATTACTT 59.791 52.381 14.79 0.00 33.41 2.24
1868 1961 0.828677 CCCCTCCGTTCGGAATTACT 59.171 55.000 14.79 0.00 33.41 2.24
1869 1962 0.179065 CCCCCTCCGTTCGGAATTAC 60.179 60.000 14.79 0.00 33.41 1.89
1870 1963 0.618393 ACCCCCTCCGTTCGGAATTA 60.618 55.000 14.79 0.00 33.41 1.40
1871 1964 0.618393 TACCCCCTCCGTTCGGAATT 60.618 55.000 14.79 1.26 33.41 2.17
1872 1965 1.002017 TACCCCCTCCGTTCGGAAT 59.998 57.895 14.79 2.09 33.41 3.01
1873 1966 1.683365 CTACCCCCTCCGTTCGGAA 60.683 63.158 14.79 0.00 33.41 4.30
1874 1967 1.941403 ATCTACCCCCTCCGTTCGGA 61.941 60.000 13.34 13.34 0.00 4.55
1875 1968 1.457079 ATCTACCCCCTCCGTTCGG 60.457 63.158 4.74 4.74 0.00 4.30
1876 1969 0.467659 AGATCTACCCCCTCCGTTCG 60.468 60.000 0.00 0.00 0.00 3.95
1877 1970 2.671896 TAGATCTACCCCCTCCGTTC 57.328 55.000 0.00 0.00 0.00 3.95
1878 1971 3.632420 AATAGATCTACCCCCTCCGTT 57.368 47.619 4.10 0.00 0.00 4.44
1879 1972 3.400322 TGTAATAGATCTACCCCCTCCGT 59.600 47.826 4.10 0.00 0.00 4.69
1880 1973 4.043608 TGTAATAGATCTACCCCCTCCG 57.956 50.000 4.10 0.00 0.00 4.63
1881 1974 7.844779 TCAATATGTAATAGATCTACCCCCTCC 59.155 40.741 4.10 0.00 28.50 4.30
1882 1975 8.840200 TCAATATGTAATAGATCTACCCCCTC 57.160 38.462 4.10 0.00 28.50 4.30
1883 1976 9.805204 AATCAATATGTAATAGATCTACCCCCT 57.195 33.333 4.10 0.00 28.50 4.79
1884 1977 9.838339 CAATCAATATGTAATAGATCTACCCCC 57.162 37.037 4.10 0.00 28.50 5.40
2282 4169 2.300723 GGACCGGTTTAAAAATGGGCTT 59.699 45.455 9.42 0.00 0.00 4.35
2312 4199 1.268352 GCGGTGCCTACAATTTTGTCA 59.732 47.619 0.00 0.00 42.35 3.58
2369 4256 4.908736 ACACACAACTGTCAGAAAATTCG 58.091 39.130 6.91 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.