Multiple sequence alignment - TraesCS5A01G215500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G215500 chr5A 100.000 2998 0 0 1 2998 431745653 431742656 0.000000e+00 5537.0
1 TraesCS5A01G215500 chr5A 88.119 101 9 3 2017 2116 694880879 694880977 1.890000e-22 117.0
2 TraesCS5A01G215500 chr5B 94.591 1368 50 12 672 2027 386665935 386664580 0.000000e+00 2095.0
3 TraesCS5A01G215500 chr5B 92.263 685 29 7 936 1596 655049882 655049198 0.000000e+00 950.0
4 TraesCS5A01G215500 chr5B 92.263 685 29 7 936 1596 655051820 655051136 0.000000e+00 950.0
5 TraesCS5A01G215500 chr5B 87.225 728 36 22 139 830 655053550 655052844 0.000000e+00 776.0
6 TraesCS5A01G215500 chr5B 87.625 501 30 11 144 618 386666439 386665945 1.210000e-153 553.0
7 TraesCS5A01G215500 chr5B 83.243 370 59 3 2623 2991 227808806 227809173 1.330000e-88 337.0
8 TraesCS5A01G215500 chr5B 87.634 186 19 3 2151 2333 655048763 655048579 2.340000e-51 213.0
9 TraesCS5A01G215500 chr5B 92.414 145 11 0 1684 1828 655049155 655049011 1.090000e-49 207.0
10 TraesCS5A01G215500 chr5B 89.167 120 8 4 819 938 655050277 655050163 8.660000e-31 145.0
11 TraesCS5A01G215500 chr5B 89.167 120 8 4 819 938 655052215 655052101 8.660000e-31 145.0
12 TraesCS5A01G215500 chr5B 95.000 80 4 0 1827 1906 655048965 655048886 3.140000e-25 126.0
13 TraesCS5A01G215500 chr5B 96.721 61 2 0 770 830 655050966 655050906 5.290000e-18 102.0
14 TraesCS5A01G215500 chr5B 78.632 117 20 3 2328 2440 692010735 692010850 4.150000e-09 73.1
15 TraesCS5A01G215500 chr5D 92.679 1243 53 16 463 1677 331213485 331212253 0.000000e+00 1757.0
16 TraesCS5A01G215500 chr5D 93.692 539 29 2 2089 2622 331210309 331209771 0.000000e+00 802.0
17 TraesCS5A01G215500 chr5D 94.503 382 18 3 1662 2042 331210693 331210314 1.200000e-163 586.0
18 TraesCS5A01G215500 chr5D 82.659 173 26 4 23 194 15560539 15560370 1.860000e-32 150.0
19 TraesCS5A01G215500 chrUn 92.263 685 29 7 936 1596 284668402 284667718 0.000000e+00 950.0
20 TraesCS5A01G215500 chrUn 92.263 685 29 7 936 1596 290414308 290413624 0.000000e+00 950.0
21 TraesCS5A01G215500 chrUn 92.263 685 29 7 936 1596 296426156 296426840 0.000000e+00 950.0
22 TraesCS5A01G215500 chrUn 92.263 685 29 7 936 1596 319986385 319987069 0.000000e+00 950.0
23 TraesCS5A01G215500 chrUn 87.310 725 38 20 139 830 296424429 296425132 0.000000e+00 780.0
24 TraesCS5A01G215500 chrUn 87.225 728 36 22 139 830 284670132 284669426 0.000000e+00 776.0
25 TraesCS5A01G215500 chrUn 87.225 728 36 22 139 830 290416038 290415332 0.000000e+00 776.0
26 TraesCS5A01G215500 chrUn 87.634 186 19 3 2151 2333 319987504 319987688 2.340000e-51 213.0
27 TraesCS5A01G215500 chrUn 92.414 145 11 0 1684 1828 319987112 319987256 1.090000e-49 207.0
28 TraesCS5A01G215500 chrUn 89.167 120 8 4 819 938 284668797 284668683 8.660000e-31 145.0
29 TraesCS5A01G215500 chrUn 89.167 120 8 4 819 938 290414703 290414589 8.660000e-31 145.0
30 TraesCS5A01G215500 chrUn 89.167 120 8 4 819 938 296425761 296425875 8.660000e-31 145.0
31 TraesCS5A01G215500 chrUn 89.167 120 8 4 819 938 319985990 319986104 8.660000e-31 145.0
32 TraesCS5A01G215500 chrUn 93.750 80 5 0 1827 1906 319987302 319987381 1.460000e-23 121.0
33 TraesCS5A01G215500 chrUn 96.721 61 2 0 770 830 319985301 319985361 5.290000e-18 102.0
34 TraesCS5A01G215500 chr2A 96.543 376 12 1 2619 2994 66305982 66306356 3.280000e-174 621.0
35 TraesCS5A01G215500 chr2A 78.448 116 20 3 2329 2440 667935095 667935209 1.490000e-08 71.3
36 TraesCS5A01G215500 chr4D 90.591 372 34 1 2623 2994 37607683 37607313 2.690000e-135 492.0
37 TraesCS5A01G215500 chr4A 90.451 377 31 4 2623 2997 650826574 650826201 2.690000e-135 492.0
38 TraesCS5A01G215500 chr4A 83.523 176 23 5 23 198 101750478 101750309 3.090000e-35 159.0
39 TraesCS5A01G215500 chr2D 90.591 372 34 1 2623 2994 275001879 275001509 2.690000e-135 492.0
40 TraesCS5A01G215500 chr2D 84.302 172 17 4 23 194 560153887 560154048 3.090000e-35 159.0
41 TraesCS5A01G215500 chr3B 89.008 373 36 4 2623 2994 146820949 146820581 9.800000e-125 457.0
42 TraesCS5A01G215500 chr3B 82.044 362 60 5 2623 2982 806262762 806263120 1.350000e-78 303.0
43 TraesCS5A01G215500 chr3B 92.045 88 7 0 2029 2116 140262894 140262807 1.130000e-24 124.0
44 TraesCS5A01G215500 chr7D 82.796 372 59 4 2625 2994 236500071 236499703 8.010000e-86 327.0
45 TraesCS5A01G215500 chr7D 86.335 161 14 4 23 183 192918762 192918914 5.140000e-38 169.0
46 TraesCS5A01G215500 chr7D 92.045 88 6 1 2030 2117 279217 279303 4.060000e-24 122.0
47 TraesCS5A01G215500 chr7D 88.350 103 10 2 2027 2128 510397754 510397855 4.060000e-24 122.0
48 TraesCS5A01G215500 chr1D 82.540 378 61 4 2619 2994 399187332 399186958 8.010000e-86 327.0
49 TraesCS5A01G215500 chr1D 83.429 175 16 11 23 194 50704387 50704551 1.860000e-32 150.0
50 TraesCS5A01G215500 chr4B 82.955 176 24 5 23 196 412216544 412216715 1.440000e-33 154.0
51 TraesCS5A01G215500 chr4B 74.648 213 45 8 2383 2593 632662752 632662957 5.320000e-13 86.1
52 TraesCS5A01G215500 chr3A 82.857 175 21 5 23 196 451717328 451717162 6.700000e-32 148.0
53 TraesCS5A01G215500 chr3A 91.111 90 7 1 2028 2117 480969574 480969486 1.460000e-23 121.0
54 TraesCS5A01G215500 chr6B 82.386 176 22 5 23 197 147089604 147089437 8.660000e-31 145.0
55 TraesCS5A01G215500 chr2B 81.564 179 29 3 23 199 741843055 741843231 8.660000e-31 145.0
56 TraesCS5A01G215500 chr2B 80.800 125 19 3 2330 2450 79024118 79024241 3.180000e-15 93.5
57 TraesCS5A01G215500 chr1B 92.222 90 5 2 2028 2116 550460386 550460474 3.140000e-25 126.0
58 TraesCS5A01G215500 chr1B 92.135 89 6 1 2029 2116 134772714 134772626 1.130000e-24 124.0
59 TraesCS5A01G215500 chr1B 78.804 184 33 4 2330 2509 470304036 470303855 5.250000e-23 119.0
60 TraesCS5A01G215500 chr1B 83.740 123 15 4 2325 2443 418674264 418674385 8.790000e-21 111.0
61 TraesCS5A01G215500 chr1A 93.103 87 5 1 2031 2117 52458241 52458326 3.140000e-25 126.0
62 TraesCS5A01G215500 chr1A 78.333 120 21 3 2325 2440 392476418 392476536 4.150000e-09 73.1
63 TraesCS5A01G215500 chr6A 92.135 89 6 1 2028 2116 557970135 557970048 1.130000e-24 124.0
64 TraesCS5A01G215500 chr6D 77.457 173 29 7 2329 2494 413063221 413063052 8.850000e-16 95.3
65 TraesCS5A01G215500 chr7A 79.167 96 15 4 2330 2421 47047384 47047290 8.970000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G215500 chr5A 431742656 431745653 2997 True 5537.000000 5537 100.000000 1 2998 1 chr5A.!!$R1 2997
1 TraesCS5A01G215500 chr5B 386664580 386666439 1859 True 1324.000000 2095 91.108000 144 2027 2 chr5B.!!$R1 1883
2 TraesCS5A01G215500 chr5B 655048579 655053550 4971 True 401.555556 950 91.317111 139 2333 9 chr5B.!!$R2 2194
3 TraesCS5A01G215500 chr5D 331209771 331213485 3714 True 1048.333333 1757 93.624667 463 2622 3 chr5D.!!$R2 2159
4 TraesCS5A01G215500 chrUn 296424429 296426840 2411 False 625.000000 950 89.580000 139 1596 3 chrUn.!!$F1 1457
5 TraesCS5A01G215500 chrUn 284667718 284670132 2414 True 623.666667 950 89.551667 139 1596 3 chrUn.!!$R1 1457
6 TraesCS5A01G215500 chrUn 290413624 290416038 2414 True 623.666667 950 89.551667 139 1596 3 chrUn.!!$R2 1457
7 TraesCS5A01G215500 chrUn 319985301 319987688 2387 False 289.666667 950 91.991500 770 2333 6 chrUn.!!$F2 1563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
876 1557 2.106074 TATTGCACGAGGCTTGCGG 61.106 57.895 0.37 0.0 43.34 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2676 7296 0.109226 CGGGTGGACTCTCTTTCGTC 60.109 60.0 0.0 0.0 0.0 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.902613 CCTCAATAATCCACATGTGTTGT 57.097 39.130 23.79 8.67 39.91 3.32
24 25 6.785191 CCTCAATAATCCACATGTGTTGTAC 58.215 40.000 23.79 0.00 36.57 2.90
25 26 6.599244 CCTCAATAATCCACATGTGTTGTACT 59.401 38.462 23.79 5.40 36.57 2.73
26 27 7.201644 CCTCAATAATCCACATGTGTTGTACTC 60.202 40.741 23.79 0.00 36.57 2.59
27 28 6.597672 TCAATAATCCACATGTGTTGTACTCC 59.402 38.462 23.79 0.00 36.57 3.85
28 29 2.851263 TCCACATGTGTTGTACTCCC 57.149 50.000 23.79 0.00 36.57 4.30
29 30 2.334977 TCCACATGTGTTGTACTCCCT 58.665 47.619 23.79 0.00 36.57 4.20
30 31 2.708861 TCCACATGTGTTGTACTCCCTT 59.291 45.455 23.79 0.00 36.57 3.95
31 32 3.074412 CCACATGTGTTGTACTCCCTTC 58.926 50.000 23.79 0.00 36.57 3.46
32 33 2.736721 CACATGTGTTGTACTCCCTTCG 59.263 50.000 18.03 0.00 36.57 3.79
33 34 2.367567 ACATGTGTTGTACTCCCTTCGT 59.632 45.455 0.00 0.00 36.57 3.85
34 35 3.181458 ACATGTGTTGTACTCCCTTCGTT 60.181 43.478 0.00 0.00 36.57 3.85
35 36 3.547054 TGTGTTGTACTCCCTTCGTTT 57.453 42.857 0.00 0.00 0.00 3.60
36 37 4.669206 TGTGTTGTACTCCCTTCGTTTA 57.331 40.909 0.00 0.00 0.00 2.01
37 38 5.217978 TGTGTTGTACTCCCTTCGTTTAT 57.782 39.130 0.00 0.00 0.00 1.40
38 39 6.343716 TGTGTTGTACTCCCTTCGTTTATA 57.656 37.500 0.00 0.00 0.00 0.98
39 40 6.757237 TGTGTTGTACTCCCTTCGTTTATAA 58.243 36.000 0.00 0.00 0.00 0.98
40 41 7.215789 TGTGTTGTACTCCCTTCGTTTATAAA 58.784 34.615 0.00 0.00 0.00 1.40
41 42 7.879160 TGTGTTGTACTCCCTTCGTTTATAAAT 59.121 33.333 0.31 0.00 0.00 1.40
42 43 9.369904 GTGTTGTACTCCCTTCGTTTATAAATA 57.630 33.333 0.31 0.00 0.00 1.40
49 50 9.955102 ACTCCCTTCGTTTATAAATATAATCCC 57.045 33.333 0.31 0.00 0.00 3.85
92 93 7.291411 AGACTATATACGGAGCAAAATGAGT 57.709 36.000 0.00 0.00 0.00 3.41
93 94 7.148641 AGACTATATACGGAGCAAAATGAGTG 58.851 38.462 0.00 0.00 0.00 3.51
94 95 7.014326 AGACTATATACGGAGCAAAATGAGTGA 59.986 37.037 0.00 0.00 0.00 3.41
95 96 7.497595 ACTATATACGGAGCAAAATGAGTGAA 58.502 34.615 0.00 0.00 0.00 3.18
96 97 8.150945 ACTATATACGGAGCAAAATGAGTGAAT 58.849 33.333 0.00 0.00 0.00 2.57
97 98 5.741388 ATACGGAGCAAAATGAGTGAATC 57.259 39.130 0.00 0.00 0.00 2.52
98 99 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
99 100 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
100 101 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
101 102 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
102 103 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
103 104 5.412594 GGAGCAAAATGAGTGAATCTACACA 59.587 40.000 0.00 0.00 42.45 3.72
104 105 6.094603 GGAGCAAAATGAGTGAATCTACACAT 59.905 38.462 0.00 0.00 42.45 3.21
105 106 7.362401 GGAGCAAAATGAGTGAATCTACACATT 60.362 37.037 0.00 0.00 41.48 2.71
106 107 7.533426 AGCAAAATGAGTGAATCTACACATTC 58.467 34.615 0.00 0.00 39.72 2.67
107 108 7.392673 AGCAAAATGAGTGAATCTACACATTCT 59.607 33.333 0.00 0.00 39.72 2.40
108 109 8.668353 GCAAAATGAGTGAATCTACACATTCTA 58.332 33.333 0.00 0.00 39.72 2.10
208 210 2.364647 GGGAGTACATAGGTGCAGGTAC 59.635 54.545 0.00 0.00 37.08 3.34
470 500 8.274322 TCCTATGACTATGGATGAAAAACATGT 58.726 33.333 0.00 0.00 39.56 3.21
516 547 6.944557 AACTTTGTTAGTTGTTGTGCTTTC 57.055 33.333 0.00 0.00 45.33 2.62
562 598 6.460537 GGTTAAAACCGAGAACAGGACAAAAT 60.461 38.462 0.00 0.00 39.66 1.82
567 603 4.002982 CCGAGAACAGGACAAAATGATCA 58.997 43.478 0.00 0.00 0.00 2.92
568 604 4.637534 CCGAGAACAGGACAAAATGATCAT 59.362 41.667 1.18 1.18 0.00 2.45
715 757 6.294065 GCCTAGTTGTAGATTATACTCGCTGT 60.294 42.308 0.00 0.00 0.00 4.40
776 818 2.755655 AGAGACAAGATACCAGTCACCG 59.244 50.000 0.00 0.00 34.80 4.94
820 862 6.005823 TCTCCATGAAGAAGCTCAAATTCAA 58.994 36.000 0.00 0.00 35.47 2.69
851 1532 7.710907 ACTTTTCAAGAAAGGAATAAAGGCAAC 59.289 33.333 11.03 0.00 32.53 4.17
876 1557 2.106074 TATTGCACGAGGCTTGCGG 61.106 57.895 0.37 0.00 43.34 5.69
996 1966 2.621338 ACTGTTTCGATCATCGCACAT 58.379 42.857 11.16 2.07 40.21 3.21
1029 1999 0.107312 ATCCTGTCATGACCAGCAGC 60.107 55.000 22.85 0.00 0.00 5.25
1101 2071 0.324830 ACTGCCTACCTCCTCACTCC 60.325 60.000 0.00 0.00 0.00 3.85
1593 4527 0.037303 TCCCTCTGCCAAAGCTTCAG 59.963 55.000 0.00 3.06 40.80 3.02
1596 4530 1.163554 CTCTGCCAAAGCTTCAGGTC 58.836 55.000 16.60 10.81 40.80 3.85
1598 4532 0.538057 CTGCCAAAGCTTCAGGTCCA 60.538 55.000 16.60 8.28 40.80 4.02
1599 4533 0.538057 TGCCAAAGCTTCAGGTCCAG 60.538 55.000 16.60 0.00 40.80 3.86
1600 4534 0.250901 GCCAAAGCTTCAGGTCCAGA 60.251 55.000 16.60 0.00 35.50 3.86
1602 4536 1.072965 CCAAAGCTTCAGGTCCAGACT 59.927 52.381 0.00 0.00 0.00 3.24
1603 4537 2.421619 CAAAGCTTCAGGTCCAGACTC 58.578 52.381 0.00 0.00 0.00 3.36
1604 4538 0.980423 AAGCTTCAGGTCCAGACTCC 59.020 55.000 0.00 0.00 0.00 3.85
1606 4540 0.908198 GCTTCAGGTCCAGACTCCAT 59.092 55.000 0.00 0.00 0.00 3.41
1618 4556 3.708631 CCAGACTCCATCACTCCATACTT 59.291 47.826 0.00 0.00 0.00 2.24
1619 4557 4.442612 CCAGACTCCATCACTCCATACTTG 60.443 50.000 0.00 0.00 0.00 3.16
1667 4608 8.817100 TGTTTTATTGAAGTATATGCTCACTCG 58.183 33.333 0.00 0.00 0.00 4.18
1681 4622 3.060205 GCTCACTCGTCAGAAGTTCAAAC 60.060 47.826 5.50 1.78 0.00 2.93
1682 4623 4.363999 CTCACTCGTCAGAAGTTCAAACT 58.636 43.478 5.50 0.00 42.04 2.66
1735 6274 6.312672 GTGGTGTTTTTCAATTGCAGTTTACT 59.687 34.615 0.00 0.00 0.00 2.24
1799 6338 0.103937 GGAAGGGATCGAGTCTGCAG 59.896 60.000 7.63 7.63 0.00 4.41
1841 6427 9.485206 TTGTTGACTGATAGTTTCTAACTAACC 57.515 33.333 3.64 0.98 46.24 2.85
1856 6442 0.667993 TAACCTGTGCAAGCTTGTGC 59.332 50.000 26.55 19.12 45.15 4.57
1905 6491 3.370840 TCTTGCAGGCAATCCAAGTAT 57.629 42.857 7.21 0.00 37.72 2.12
1906 6492 3.282021 TCTTGCAGGCAATCCAAGTATC 58.718 45.455 7.21 0.00 37.72 2.24
1907 6493 3.054139 TCTTGCAGGCAATCCAAGTATCT 60.054 43.478 7.21 0.00 37.72 1.98
1908 6494 2.646930 TGCAGGCAATCCAAGTATCTG 58.353 47.619 0.00 0.00 33.74 2.90
1909 6495 1.336125 GCAGGCAATCCAAGTATCTGC 59.664 52.381 0.00 0.00 39.13 4.26
1910 6496 2.646930 CAGGCAATCCAAGTATCTGCA 58.353 47.619 0.00 0.00 34.66 4.41
1911 6497 2.357009 CAGGCAATCCAAGTATCTGCAC 59.643 50.000 0.00 0.00 34.66 4.57
1912 6498 2.240667 AGGCAATCCAAGTATCTGCACT 59.759 45.455 0.00 0.00 34.66 4.40
1913 6499 2.357009 GGCAATCCAAGTATCTGCACTG 59.643 50.000 0.00 0.00 34.66 3.66
1914 6500 2.223433 GCAATCCAAGTATCTGCACTGC 60.223 50.000 0.00 0.00 33.19 4.40
1915 6501 2.338577 ATCCAAGTATCTGCACTGCC 57.661 50.000 0.00 0.00 0.00 4.85
1916 6502 0.253044 TCCAAGTATCTGCACTGCCC 59.747 55.000 0.00 0.00 0.00 5.36
1917 6503 0.749454 CCAAGTATCTGCACTGCCCC 60.749 60.000 0.00 0.00 0.00 5.80
1918 6504 0.035152 CAAGTATCTGCACTGCCCCA 60.035 55.000 0.00 0.00 0.00 4.96
1919 6505 0.035056 AAGTATCTGCACTGCCCCAC 60.035 55.000 0.00 0.00 0.00 4.61
1920 6506 1.200760 AGTATCTGCACTGCCCCACA 61.201 55.000 0.00 0.00 0.00 4.17
1921 6507 0.107017 GTATCTGCACTGCCCCACAT 60.107 55.000 0.00 0.00 0.00 3.21
1922 6508 0.181114 TATCTGCACTGCCCCACATC 59.819 55.000 0.00 0.00 0.00 3.06
1923 6509 1.569030 ATCTGCACTGCCCCACATCT 61.569 55.000 0.00 0.00 0.00 2.90
1924 6510 1.748122 CTGCACTGCCCCACATCTC 60.748 63.158 0.00 0.00 0.00 2.75
1925 6511 2.352422 GCACTGCCCCACATCTCA 59.648 61.111 0.00 0.00 0.00 3.27
1926 6512 2.042831 GCACTGCCCCACATCTCAC 61.043 63.158 0.00 0.00 0.00 3.51
1927 6513 1.376086 CACTGCCCCACATCTCACA 59.624 57.895 0.00 0.00 0.00 3.58
1928 6514 0.675837 CACTGCCCCACATCTCACAG 60.676 60.000 0.00 0.00 0.00 3.66
1929 6515 0.837691 ACTGCCCCACATCTCACAGA 60.838 55.000 0.00 0.00 0.00 3.41
1930 6516 0.325933 CTGCCCCACATCTCACAGAA 59.674 55.000 0.00 0.00 0.00 3.02
1931 6517 0.325933 TGCCCCACATCTCACAGAAG 59.674 55.000 0.00 0.00 0.00 2.85
1948 6561 4.633565 ACAGAAGTGCTCTATAAAGCTTGC 59.366 41.667 0.00 0.00 42.94 4.01
2016 6629 7.346751 TGCTGATTTCATAGAATTTAACCCC 57.653 36.000 0.00 0.00 0.00 4.95
2042 6655 1.457346 TTCGAACTACTCCCTCCGTC 58.543 55.000 0.00 0.00 0.00 4.79
2044 6657 1.015868 CGAACTACTCCCTCCGTCTC 58.984 60.000 0.00 0.00 0.00 3.36
2045 6658 1.678123 CGAACTACTCCCTCCGTCTCA 60.678 57.143 0.00 0.00 0.00 3.27
2046 6659 2.657143 GAACTACTCCCTCCGTCTCAT 58.343 52.381 0.00 0.00 0.00 2.90
2047 6660 3.743584 CGAACTACTCCCTCCGTCTCATA 60.744 52.174 0.00 0.00 0.00 2.15
2048 6661 3.947612 ACTACTCCCTCCGTCTCATAA 57.052 47.619 0.00 0.00 0.00 1.90
2049 6662 4.456662 ACTACTCCCTCCGTCTCATAAT 57.543 45.455 0.00 0.00 0.00 1.28
2050 6663 5.579753 ACTACTCCCTCCGTCTCATAATA 57.420 43.478 0.00 0.00 0.00 0.98
2051 6664 6.142259 ACTACTCCCTCCGTCTCATAATAT 57.858 41.667 0.00 0.00 0.00 1.28
2052 6665 7.268212 ACTACTCCCTCCGTCTCATAATATA 57.732 40.000 0.00 0.00 0.00 0.86
2053 6666 7.696981 ACTACTCCCTCCGTCTCATAATATAA 58.303 38.462 0.00 0.00 0.00 0.98
2054 6667 7.830201 ACTACTCCCTCCGTCTCATAATATAAG 59.170 40.741 0.00 0.00 0.00 1.73
2055 6668 6.791371 ACTCCCTCCGTCTCATAATATAAGA 58.209 40.000 0.00 0.00 0.00 2.10
2056 6669 7.239438 ACTCCCTCCGTCTCATAATATAAGAA 58.761 38.462 0.00 0.00 0.00 2.52
2057 6670 7.177041 ACTCCCTCCGTCTCATAATATAAGAAC 59.823 40.741 0.00 0.00 0.00 3.01
2058 6671 6.150641 TCCCTCCGTCTCATAATATAAGAACG 59.849 42.308 0.00 0.00 0.00 3.95
2059 6672 6.072064 CCCTCCGTCTCATAATATAAGAACGT 60.072 42.308 0.00 0.00 0.00 3.99
2060 6673 7.368833 CCTCCGTCTCATAATATAAGAACGTT 58.631 38.462 0.00 0.00 0.00 3.99
2061 6674 7.537991 CCTCCGTCTCATAATATAAGAACGTTC 59.462 40.741 20.71 20.71 0.00 3.95
2062 6675 8.162878 TCCGTCTCATAATATAAGAACGTTCT 57.837 34.615 24.93 24.93 39.74 3.01
2064 6677 8.691727 CCGTCTCATAATATAAGAACGTTCTTG 58.308 37.037 40.39 27.84 46.34 3.02
2065 6678 9.447040 CGTCTCATAATATAAGAACGTTCTTGA 57.553 33.333 40.39 31.02 46.34 3.02
2073 6686 8.684973 ATATAAGAACGTTCTTGACACTACAC 57.315 34.615 40.39 9.85 46.34 2.90
2074 6687 4.650754 AGAACGTTCTTGACACTACACT 57.349 40.909 24.93 0.00 32.55 3.55
2075 6688 5.762825 AGAACGTTCTTGACACTACACTA 57.237 39.130 24.93 0.00 32.55 2.74
2076 6689 5.759963 AGAACGTTCTTGACACTACACTAG 58.240 41.667 24.93 0.00 32.55 2.57
2077 6690 5.298777 AGAACGTTCTTGACACTACACTAGT 59.701 40.000 24.93 0.00 34.80 2.57
2130 6743 4.360563 AGCGAGTAGAACGGATTTATGTG 58.639 43.478 0.00 0.00 0.00 3.21
2344 6964 5.428253 TCTATGAAGAGCCAATTACACCAC 58.572 41.667 0.00 0.00 0.00 4.16
2348 6968 1.705186 AGAGCCAATTACACCACTGGT 59.295 47.619 0.00 0.00 35.62 4.00
2360 6980 3.290948 ACCACTGGTGCTAAAACTTGA 57.709 42.857 0.00 0.00 32.98 3.02
2362 6982 2.948979 CCACTGGTGCTAAAACTTGACA 59.051 45.455 0.00 0.00 0.00 3.58
2411 7031 4.119136 GGCATACATTAAATTGGTGCCAC 58.881 43.478 16.57 0.00 44.87 5.01
2440 7060 1.374560 TTGGTGTGCATATACGGTGC 58.625 50.000 0.00 0.00 42.81 5.01
2478 7098 7.009083 GCATAAGAATATGATGCTGACTAGACG 59.991 40.741 0.00 0.00 41.25 4.18
2479 7099 4.804108 AGAATATGATGCTGACTAGACGC 58.196 43.478 0.00 0.00 0.00 5.19
2511 7131 0.955428 TGAAATCCGCTGTCAGCCAC 60.955 55.000 19.14 5.20 38.18 5.01
2556 7176 6.478344 GTGTGGCATGTTATTTTGTGAAGAAA 59.522 34.615 0.00 0.00 0.00 2.52
2557 7177 6.478344 TGTGGCATGTTATTTTGTGAAGAAAC 59.522 34.615 0.00 0.00 0.00 2.78
2572 7192 8.614469 TGTGAAGAAACAAAAACTTGGAATTT 57.386 26.923 0.00 0.00 0.00 1.82
2622 7242 2.643232 GGGGGTCGTGAGCGTAACT 61.643 63.158 0.00 0.00 39.49 2.24
2623 7243 1.291272 GGGGTCGTGAGCGTAACTT 59.709 57.895 0.00 0.00 39.49 2.66
2624 7244 0.320160 GGGGTCGTGAGCGTAACTTT 60.320 55.000 0.00 0.00 39.49 2.66
2625 7245 1.505425 GGGTCGTGAGCGTAACTTTT 58.495 50.000 0.00 0.00 39.49 2.27
2626 7246 1.869132 GGGTCGTGAGCGTAACTTTTT 59.131 47.619 0.00 0.00 39.49 1.94
2650 7270 8.751302 TTTTTAGACAAACTTCGAAGCTTTTT 57.249 26.923 24.86 14.77 0.00 1.94
2651 7271 9.843334 TTTTTAGACAAACTTCGAAGCTTTTTA 57.157 25.926 24.86 8.25 0.00 1.52
2656 7276 7.797123 AGACAAACTTCGAAGCTTTTTATTACG 59.203 33.333 24.86 11.96 0.00 3.18
2657 7277 7.412063 ACAAACTTCGAAGCTTTTTATTACGT 58.588 30.769 24.86 12.47 0.00 3.57
2658 7278 7.585210 ACAAACTTCGAAGCTTTTTATTACGTC 59.415 33.333 24.86 0.00 0.00 4.34
2659 7279 5.840250 ACTTCGAAGCTTTTTATTACGTCG 58.160 37.500 24.86 0.00 35.75 5.12
2660 7280 5.403466 ACTTCGAAGCTTTTTATTACGTCGT 59.597 36.000 24.86 2.21 35.87 4.34
2661 7281 5.425941 TCGAAGCTTTTTATTACGTCGTC 57.574 39.130 0.00 0.00 35.87 4.20
2662 7282 4.916831 TCGAAGCTTTTTATTACGTCGTCA 59.083 37.500 0.00 0.00 35.87 4.35
2663 7283 5.005192 CGAAGCTTTTTATTACGTCGTCAC 58.995 41.667 0.00 0.00 30.99 3.67
2664 7284 5.387649 CGAAGCTTTTTATTACGTCGTCACA 60.388 40.000 0.00 0.00 30.99 3.58
2665 7285 5.910637 AGCTTTTTATTACGTCGTCACAA 57.089 34.783 0.00 0.00 0.00 3.33
2666 7286 6.476243 AGCTTTTTATTACGTCGTCACAAT 57.524 33.333 0.00 0.00 0.00 2.71
2667 7287 6.304126 AGCTTTTTATTACGTCGTCACAATG 58.696 36.000 0.00 0.00 0.00 2.82
2668 7288 6.073440 AGCTTTTTATTACGTCGTCACAATGT 60.073 34.615 0.00 0.00 0.00 2.71
2669 7289 6.575942 GCTTTTTATTACGTCGTCACAATGTT 59.424 34.615 0.00 0.00 0.00 2.71
2670 7290 7.112426 GCTTTTTATTACGTCGTCACAATGTTT 59.888 33.333 0.00 0.00 0.00 2.83
2671 7291 9.583530 CTTTTTATTACGTCGTCACAATGTTTA 57.416 29.630 0.00 0.00 0.00 2.01
2672 7292 8.916657 TTTTATTACGTCGTCACAATGTTTAC 57.083 30.769 0.00 0.00 0.00 2.01
2673 7293 7.634809 TTATTACGTCGTCACAATGTTTACA 57.365 32.000 0.00 0.00 0.00 2.41
2674 7294 3.847037 ACGTCGTCACAATGTTTACAC 57.153 42.857 0.00 0.00 0.00 2.90
2675 7295 2.216940 ACGTCGTCACAATGTTTACACG 59.783 45.455 0.00 13.52 0.00 4.49
2676 7296 2.409244 CGTCGTCACAATGTTTACACGG 60.409 50.000 4.73 0.00 0.00 4.94
2677 7297 2.796031 GTCGTCACAATGTTTACACGGA 59.204 45.455 4.73 0.00 0.00 4.69
2678 7298 2.796031 TCGTCACAATGTTTACACGGAC 59.204 45.455 4.73 0.00 0.00 4.79
2679 7299 2.409244 CGTCACAATGTTTACACGGACG 60.409 50.000 5.93 5.93 40.45 4.79
2680 7300 2.796031 GTCACAATGTTTACACGGACGA 59.204 45.455 0.00 0.00 0.00 4.20
2681 7301 3.245754 GTCACAATGTTTACACGGACGAA 59.754 43.478 0.00 0.00 0.00 3.85
2682 7302 3.869832 TCACAATGTTTACACGGACGAAA 59.130 39.130 0.00 0.00 0.00 3.46
2683 7303 4.025563 TCACAATGTTTACACGGACGAAAG 60.026 41.667 0.00 0.00 0.00 2.62
2684 7304 4.025563 CACAATGTTTACACGGACGAAAGA 60.026 41.667 0.00 0.00 0.00 2.52
2685 7305 4.210537 ACAATGTTTACACGGACGAAAGAG 59.789 41.667 0.00 0.00 0.00 2.85
2686 7306 3.713858 TGTTTACACGGACGAAAGAGA 57.286 42.857 0.00 0.00 0.00 3.10
2687 7307 3.635331 TGTTTACACGGACGAAAGAGAG 58.365 45.455 0.00 0.00 0.00 3.20
2688 7308 3.067180 TGTTTACACGGACGAAAGAGAGT 59.933 43.478 0.00 0.00 0.00 3.24
2689 7309 3.549299 TTACACGGACGAAAGAGAGTC 57.451 47.619 0.00 0.00 36.70 3.36
2694 7314 3.816580 GACGAAAGAGAGTCCACCC 57.183 57.895 0.00 0.00 0.00 4.61
2695 7315 0.109226 GACGAAAGAGAGTCCACCCG 60.109 60.000 0.00 0.00 0.00 5.28
2696 7316 1.215647 CGAAAGAGAGTCCACCCGG 59.784 63.158 0.00 0.00 0.00 5.73
2697 7317 1.079057 GAAAGAGAGTCCACCCGGC 60.079 63.158 0.00 0.00 0.00 6.13
2698 7318 1.536662 AAAGAGAGTCCACCCGGCT 60.537 57.895 0.00 0.00 0.00 5.52
2699 7319 1.831652 AAAGAGAGTCCACCCGGCTG 61.832 60.000 0.00 0.00 0.00 4.85
2700 7320 2.680352 GAGAGTCCACCCGGCTGA 60.680 66.667 0.00 0.00 0.00 4.26
2701 7321 2.039624 AGAGTCCACCCGGCTGAT 59.960 61.111 0.00 0.00 0.00 2.90
2702 7322 2.022240 GAGAGTCCACCCGGCTGATC 62.022 65.000 0.00 0.00 0.00 2.92
2703 7323 2.039624 AGTCCACCCGGCTGATCT 59.960 61.111 0.00 0.00 0.00 2.75
2704 7324 0.755698 GAGTCCACCCGGCTGATCTA 60.756 60.000 0.00 0.00 0.00 1.98
2705 7325 0.757188 AGTCCACCCGGCTGATCTAG 60.757 60.000 0.00 0.00 0.00 2.43
2717 7337 1.600957 CTGATCTAGCCAAACATGCCG 59.399 52.381 0.00 0.00 0.00 5.69
2718 7338 0.947244 GATCTAGCCAAACATGCCGG 59.053 55.000 0.00 0.00 0.00 6.13
2719 7339 1.103398 ATCTAGCCAAACATGCCGGC 61.103 55.000 22.73 22.73 46.62 6.13
2722 7342 4.001226 GCCAAACATGCCGGCCAA 62.001 61.111 26.77 6.41 40.07 4.52
2723 7343 2.048316 CCAAACATGCCGGCCAAC 60.048 61.111 26.77 0.00 0.00 3.77
2724 7344 2.573083 CCAAACATGCCGGCCAACT 61.573 57.895 26.77 2.63 0.00 3.16
2725 7345 1.373246 CAAACATGCCGGCCAACTG 60.373 57.895 26.77 18.07 0.00 3.16
2726 7346 2.573083 AAACATGCCGGCCAACTGG 61.573 57.895 26.77 9.25 46.21 4.00
2727 7347 3.808218 AACATGCCGGCCAACTGGT 62.808 57.895 26.77 12.22 45.10 4.00
2728 7348 2.045438 CATGCCGGCCAACTGGTA 60.045 61.111 26.77 1.65 45.10 3.25
2729 7349 2.114670 CATGCCGGCCAACTGGTAG 61.115 63.158 26.77 0.00 45.10 3.18
2730 7350 3.344137 ATGCCGGCCAACTGGTAGG 62.344 63.158 26.77 2.76 45.10 3.18
2731 7351 3.712907 GCCGGCCAACTGGTAGGA 61.713 66.667 18.11 0.00 45.10 2.94
2732 7352 3.074281 CCGGCCAACTGGTAGGAA 58.926 61.111 2.24 0.00 37.57 3.36
2733 7353 1.607612 CCGGCCAACTGGTAGGAAT 59.392 57.895 2.24 0.00 37.57 3.01
2734 7354 0.834612 CCGGCCAACTGGTAGGAATA 59.165 55.000 2.24 0.00 37.57 1.75
2735 7355 1.210967 CCGGCCAACTGGTAGGAATAA 59.789 52.381 2.24 0.00 37.57 1.40
2736 7356 2.356330 CCGGCCAACTGGTAGGAATAAA 60.356 50.000 2.24 0.00 37.57 1.40
2737 7357 2.943033 CGGCCAACTGGTAGGAATAAAG 59.057 50.000 2.24 0.00 37.57 1.85
2738 7358 2.688446 GGCCAACTGGTAGGAATAAAGC 59.312 50.000 0.00 0.00 37.57 3.51
2739 7359 2.354821 GCCAACTGGTAGGAATAAAGCG 59.645 50.000 0.00 0.00 37.57 4.68
2740 7360 3.606687 CCAACTGGTAGGAATAAAGCGT 58.393 45.455 0.00 0.00 0.00 5.07
2741 7361 3.374058 CCAACTGGTAGGAATAAAGCGTG 59.626 47.826 0.00 0.00 0.00 5.34
2742 7362 2.629051 ACTGGTAGGAATAAAGCGTGC 58.371 47.619 0.00 0.00 0.00 5.34
2743 7363 2.236395 ACTGGTAGGAATAAAGCGTGCT 59.764 45.455 0.00 0.00 0.00 4.40
2744 7364 3.270877 CTGGTAGGAATAAAGCGTGCTT 58.729 45.455 0.24 0.24 37.98 3.91
2745 7365 3.267483 TGGTAGGAATAAAGCGTGCTTC 58.733 45.455 7.67 0.00 34.84 3.86
2746 7366 2.284417 GGTAGGAATAAAGCGTGCTTCG 59.716 50.000 7.67 0.00 43.12 3.79
2755 7375 4.996113 CGTGCTTCGCAAGTTTGT 57.004 50.000 0.00 0.00 41.47 2.83
2756 7376 2.483793 CGTGCTTCGCAAGTTTGTG 58.516 52.632 0.00 0.00 41.47 3.33
2757 7377 0.027455 CGTGCTTCGCAAGTTTGTGA 59.973 50.000 4.11 4.11 45.09 3.58
2758 7378 1.746760 GTGCTTCGCAAGTTTGTGAG 58.253 50.000 8.00 4.92 46.93 3.51
2759 7379 1.064060 GTGCTTCGCAAGTTTGTGAGT 59.936 47.619 8.00 0.00 46.93 3.41
2760 7380 1.330521 TGCTTCGCAAGTTTGTGAGTC 59.669 47.619 8.00 5.50 46.93 3.36
2761 7381 1.599542 GCTTCGCAAGTTTGTGAGTCT 59.400 47.619 8.00 0.00 46.93 3.24
2762 7382 2.348966 GCTTCGCAAGTTTGTGAGTCTC 60.349 50.000 8.00 0.00 46.93 3.36
2763 7383 1.487482 TCGCAAGTTTGTGAGTCTCG 58.513 50.000 4.11 0.00 42.25 4.04
2764 7384 1.066454 TCGCAAGTTTGTGAGTCTCGA 59.934 47.619 4.11 0.00 42.25 4.04
2765 7385 1.190323 CGCAAGTTTGTGAGTCTCGAC 59.810 52.381 0.00 0.00 41.01 4.20
2766 7386 2.201732 GCAAGTTTGTGAGTCTCGACA 58.798 47.619 0.00 0.00 0.00 4.35
2767 7387 2.802816 GCAAGTTTGTGAGTCTCGACAT 59.197 45.455 0.00 0.00 0.00 3.06
2768 7388 3.248602 GCAAGTTTGTGAGTCTCGACATT 59.751 43.478 0.00 0.00 0.00 2.71
2769 7389 4.609336 GCAAGTTTGTGAGTCTCGACATTC 60.609 45.833 0.00 4.01 0.00 2.67
2770 7390 3.309388 AGTTTGTGAGTCTCGACATTCG 58.691 45.455 0.00 0.00 42.10 3.34
2780 7400 2.327200 TCGACATTCGAGCTCCTAGA 57.673 50.000 8.47 0.00 44.82 2.43
2781 7401 1.941294 TCGACATTCGAGCTCCTAGAC 59.059 52.381 8.47 0.00 44.82 2.59
2782 7402 1.944024 CGACATTCGAGCTCCTAGACT 59.056 52.381 8.47 0.00 43.74 3.24
2783 7403 2.032377 CGACATTCGAGCTCCTAGACTC 60.032 54.545 8.47 0.00 43.74 3.36
2784 7404 2.946329 GACATTCGAGCTCCTAGACTCA 59.054 50.000 8.47 0.00 32.98 3.41
2785 7405 3.561143 ACATTCGAGCTCCTAGACTCAT 58.439 45.455 8.47 0.00 32.98 2.90
2786 7406 3.317711 ACATTCGAGCTCCTAGACTCATG 59.682 47.826 8.47 3.80 32.98 3.07
2787 7407 3.283259 TTCGAGCTCCTAGACTCATGA 57.717 47.619 8.47 0.00 32.98 3.07
2788 7408 2.566913 TCGAGCTCCTAGACTCATGAC 58.433 52.381 8.47 0.00 32.98 3.06
2789 7409 1.606668 CGAGCTCCTAGACTCATGACC 59.393 57.143 8.47 0.00 32.98 4.02
2790 7410 2.660572 GAGCTCCTAGACTCATGACCA 58.339 52.381 0.87 0.00 32.98 4.02
2791 7411 3.027412 GAGCTCCTAGACTCATGACCAA 58.973 50.000 0.87 0.00 32.98 3.67
2792 7412 3.640967 GAGCTCCTAGACTCATGACCAAT 59.359 47.826 0.87 0.00 32.98 3.16
2793 7413 4.809193 AGCTCCTAGACTCATGACCAATA 58.191 43.478 0.00 0.00 0.00 1.90
2794 7414 5.401750 AGCTCCTAGACTCATGACCAATAT 58.598 41.667 0.00 0.00 0.00 1.28
2795 7415 5.843421 AGCTCCTAGACTCATGACCAATATT 59.157 40.000 0.00 0.00 0.00 1.28
2796 7416 7.013220 AGCTCCTAGACTCATGACCAATATTA 58.987 38.462 0.00 0.00 0.00 0.98
2797 7417 7.039363 AGCTCCTAGACTCATGACCAATATTAC 60.039 40.741 0.00 0.00 0.00 1.89
2798 7418 7.255977 GCTCCTAGACTCATGACCAATATTACA 60.256 40.741 0.00 0.00 0.00 2.41
2799 7419 8.727100 TCCTAGACTCATGACCAATATTACAT 57.273 34.615 0.00 0.00 0.00 2.29
2800 7420 8.588472 TCCTAGACTCATGACCAATATTACATG 58.412 37.037 16.49 16.49 40.65 3.21
2801 7421 8.370940 CCTAGACTCATGACCAATATTACATGT 58.629 37.037 19.37 2.69 40.32 3.21
2804 7424 9.716531 AGACTCATGACCAATATTACATGTATG 57.283 33.333 6.36 1.73 40.32 2.39
2805 7425 9.710900 GACTCATGACCAATATTACATGTATGA 57.289 33.333 6.36 3.61 40.32 2.15
2854 7474 8.837788 TTCATGTATAATTGCTCCATAGACTG 57.162 34.615 0.00 0.00 0.00 3.51
2855 7475 7.966812 TCATGTATAATTGCTCCATAGACTGT 58.033 34.615 0.00 0.00 0.00 3.55
2856 7476 8.432013 TCATGTATAATTGCTCCATAGACTGTT 58.568 33.333 0.00 0.00 0.00 3.16
2857 7477 8.501580 CATGTATAATTGCTCCATAGACTGTTG 58.498 37.037 0.00 0.00 0.00 3.33
2858 7478 7.564793 TGTATAATTGCTCCATAGACTGTTGT 58.435 34.615 0.00 0.00 0.00 3.32
2859 7479 8.700973 TGTATAATTGCTCCATAGACTGTTGTA 58.299 33.333 0.00 0.00 0.00 2.41
2860 7480 9.712305 GTATAATTGCTCCATAGACTGTTGTAT 57.288 33.333 0.00 0.00 0.00 2.29
2862 7482 6.932356 ATTGCTCCATAGACTGTTGTATTG 57.068 37.500 0.00 0.00 0.00 1.90
2863 7483 5.420725 TGCTCCATAGACTGTTGTATTGT 57.579 39.130 0.00 0.00 0.00 2.71
2864 7484 5.804639 TGCTCCATAGACTGTTGTATTGTT 58.195 37.500 0.00 0.00 0.00 2.83
2865 7485 5.643348 TGCTCCATAGACTGTTGTATTGTTG 59.357 40.000 0.00 0.00 0.00 3.33
2866 7486 5.643777 GCTCCATAGACTGTTGTATTGTTGT 59.356 40.000 0.00 0.00 0.00 3.32
2867 7487 6.183360 GCTCCATAGACTGTTGTATTGTTGTC 60.183 42.308 0.00 0.00 0.00 3.18
2868 7488 7.004555 TCCATAGACTGTTGTATTGTTGTCT 57.995 36.000 0.00 0.00 38.21 3.41
2869 7489 7.097192 TCCATAGACTGTTGTATTGTTGTCTC 58.903 38.462 0.00 0.00 36.39 3.36
2870 7490 6.035005 CCATAGACTGTTGTATTGTTGTCTCG 59.965 42.308 0.00 0.00 36.39 4.04
2871 7491 4.307432 AGACTGTTGTATTGTTGTCTCGG 58.693 43.478 0.00 0.00 30.08 4.63
2872 7492 4.038763 AGACTGTTGTATTGTTGTCTCGGA 59.961 41.667 0.00 0.00 30.08 4.55
2873 7493 4.894784 ACTGTTGTATTGTTGTCTCGGAT 58.105 39.130 0.00 0.00 0.00 4.18
2874 7494 4.690748 ACTGTTGTATTGTTGTCTCGGATG 59.309 41.667 0.00 0.00 0.00 3.51
2875 7495 4.637276 TGTTGTATTGTTGTCTCGGATGT 58.363 39.130 0.00 0.00 0.00 3.06
2876 7496 4.688879 TGTTGTATTGTTGTCTCGGATGTC 59.311 41.667 0.00 0.00 0.00 3.06
2877 7497 3.857052 TGTATTGTTGTCTCGGATGTCC 58.143 45.455 0.00 0.00 0.00 4.02
2878 7498 3.513912 TGTATTGTTGTCTCGGATGTCCT 59.486 43.478 0.00 0.00 0.00 3.85
2879 7499 2.743636 TTGTTGTCTCGGATGTCCTC 57.256 50.000 0.00 0.00 0.00 3.71
2880 7500 0.526211 TGTTGTCTCGGATGTCCTCG 59.474 55.000 0.00 0.00 0.00 4.63
2881 7501 0.809385 GTTGTCTCGGATGTCCTCGA 59.191 55.000 0.00 0.00 0.00 4.04
2882 7502 0.809385 TTGTCTCGGATGTCCTCGAC 59.191 55.000 9.36 9.36 35.09 4.20
2883 7503 1.030488 TGTCTCGGATGTCCTCGACC 61.030 60.000 12.18 0.00 34.22 4.79
2884 7504 1.030488 GTCTCGGATGTCCTCGACCA 61.030 60.000 0.00 0.00 31.13 4.02
2885 7505 1.030488 TCTCGGATGTCCTCGACCAC 61.030 60.000 0.00 0.00 0.00 4.16
2886 7506 2.005960 CTCGGATGTCCTCGACCACC 62.006 65.000 0.00 0.00 0.00 4.61
2887 7507 2.348104 CGGATGTCCTCGACCACCA 61.348 63.158 0.00 0.00 31.13 4.17
2888 7508 1.218316 GGATGTCCTCGACCACCAC 59.782 63.158 0.00 0.00 31.13 4.16
2889 7509 1.218316 GATGTCCTCGACCACCACC 59.782 63.158 0.00 0.00 0.00 4.61
2890 7510 1.229209 ATGTCCTCGACCACCACCT 60.229 57.895 0.00 0.00 0.00 4.00
2891 7511 0.836400 ATGTCCTCGACCACCACCTT 60.836 55.000 0.00 0.00 0.00 3.50
2892 7512 1.052124 TGTCCTCGACCACCACCTTT 61.052 55.000 0.00 0.00 0.00 3.11
2893 7513 0.602905 GTCCTCGACCACCACCTTTG 60.603 60.000 0.00 0.00 0.00 2.77
2894 7514 0.761323 TCCTCGACCACCACCTTTGA 60.761 55.000 0.00 0.00 0.00 2.69
2895 7515 0.320771 CCTCGACCACCACCTTTGAG 60.321 60.000 0.00 0.00 0.00 3.02
2896 7516 0.393077 CTCGACCACCACCTTTGAGT 59.607 55.000 0.00 0.00 0.00 3.41
2897 7517 0.391597 TCGACCACCACCTTTGAGTC 59.608 55.000 0.00 0.00 0.00 3.36
2898 7518 0.602905 CGACCACCACCTTTGAGTCC 60.603 60.000 0.00 0.00 0.00 3.85
2899 7519 0.602905 GACCACCACCTTTGAGTCCG 60.603 60.000 0.00 0.00 0.00 4.79
2900 7520 1.052124 ACCACCACCTTTGAGTCCGA 61.052 55.000 0.00 0.00 0.00 4.55
2901 7521 0.602905 CCACCACCTTTGAGTCCGAC 60.603 60.000 0.00 0.00 0.00 4.79
2902 7522 0.944311 CACCACCTTTGAGTCCGACG 60.944 60.000 0.00 0.00 0.00 5.12
2903 7523 2.027625 CCACCTTTGAGTCCGACGC 61.028 63.158 0.00 0.00 0.00 5.19
2904 7524 2.027625 CACCTTTGAGTCCGACGCC 61.028 63.158 0.00 0.00 0.00 5.68
2905 7525 2.342279 CCTTTGAGTCCGACGCCA 59.658 61.111 0.00 0.00 0.00 5.69
2906 7526 2.027625 CCTTTGAGTCCGACGCCAC 61.028 63.158 0.00 0.00 0.00 5.01
2907 7527 1.006102 CTTTGAGTCCGACGCCACT 60.006 57.895 0.00 0.00 0.00 4.00
2908 7528 0.600255 CTTTGAGTCCGACGCCACTT 60.600 55.000 0.00 0.00 0.00 3.16
2909 7529 0.878523 TTTGAGTCCGACGCCACTTG 60.879 55.000 0.00 0.00 0.00 3.16
2910 7530 2.432628 GAGTCCGACGCCACTTGG 60.433 66.667 0.00 0.00 38.53 3.61
2911 7531 2.915659 AGTCCGACGCCACTTGGA 60.916 61.111 0.00 0.00 37.39 3.53
2912 7532 2.227089 GAGTCCGACGCCACTTGGAT 62.227 60.000 0.00 0.00 37.39 3.41
2913 7533 2.100631 GTCCGACGCCACTTGGATG 61.101 63.158 0.00 0.00 37.39 3.51
2914 7534 2.047274 CCGACGCCACTTGGATGT 60.047 61.111 0.00 0.00 37.39 3.06
2915 7535 1.671054 CCGACGCCACTTGGATGTT 60.671 57.895 0.00 0.00 37.39 2.71
2916 7536 0.390603 CCGACGCCACTTGGATGTTA 60.391 55.000 0.00 0.00 37.39 2.41
2917 7537 0.999406 CGACGCCACTTGGATGTTAG 59.001 55.000 0.00 0.00 37.39 2.34
2918 7538 0.727398 GACGCCACTTGGATGTTAGC 59.273 55.000 0.00 0.00 37.39 3.09
2919 7539 0.676782 ACGCCACTTGGATGTTAGCC 60.677 55.000 0.00 0.00 37.39 3.93
2920 7540 0.676466 CGCCACTTGGATGTTAGCCA 60.676 55.000 0.00 0.00 37.39 4.75
2921 7541 0.811281 GCCACTTGGATGTTAGCCAC 59.189 55.000 0.00 0.00 37.39 5.01
2922 7542 1.086696 CCACTTGGATGTTAGCCACG 58.913 55.000 0.00 0.00 37.39 4.94
2923 7543 1.610624 CCACTTGGATGTTAGCCACGT 60.611 52.381 0.00 0.00 38.29 4.49
2924 7544 2.354303 CCACTTGGATGTTAGCCACGTA 60.354 50.000 0.00 0.00 35.93 3.57
2925 7545 3.331150 CACTTGGATGTTAGCCACGTAA 58.669 45.455 0.00 0.00 35.93 3.18
2926 7546 3.749088 CACTTGGATGTTAGCCACGTAAA 59.251 43.478 0.00 0.00 35.93 2.01
2927 7547 4.000988 ACTTGGATGTTAGCCACGTAAAG 58.999 43.478 0.00 0.00 36.29 1.85
2928 7548 3.965379 TGGATGTTAGCCACGTAAAGA 57.035 42.857 0.00 0.00 0.00 2.52
2929 7549 4.481368 TGGATGTTAGCCACGTAAAGAT 57.519 40.909 0.00 0.00 0.00 2.40
2930 7550 4.439057 TGGATGTTAGCCACGTAAAGATC 58.561 43.478 0.00 0.00 0.00 2.75
2931 7551 4.081365 TGGATGTTAGCCACGTAAAGATCA 60.081 41.667 0.00 0.00 0.00 2.92
2932 7552 5.057149 GGATGTTAGCCACGTAAAGATCAT 58.943 41.667 0.00 0.00 0.00 2.45
2933 7553 5.177696 GGATGTTAGCCACGTAAAGATCATC 59.822 44.000 0.00 0.00 0.00 2.92
2934 7554 5.079689 TGTTAGCCACGTAAAGATCATCA 57.920 39.130 0.00 0.00 0.00 3.07
2935 7555 5.109210 TGTTAGCCACGTAAAGATCATCAG 58.891 41.667 0.00 0.00 0.00 2.90
2936 7556 3.895232 AGCCACGTAAAGATCATCAGT 57.105 42.857 0.00 0.00 0.00 3.41
2937 7557 4.207891 AGCCACGTAAAGATCATCAGTT 57.792 40.909 0.00 0.00 0.00 3.16
2938 7558 5.339008 AGCCACGTAAAGATCATCAGTTA 57.661 39.130 0.00 0.00 0.00 2.24
2939 7559 5.352284 AGCCACGTAAAGATCATCAGTTAG 58.648 41.667 0.00 0.00 0.00 2.34
2940 7560 4.025647 GCCACGTAAAGATCATCAGTTAGC 60.026 45.833 0.00 0.00 0.00 3.09
2941 7561 4.207224 CCACGTAAAGATCATCAGTTAGCG 59.793 45.833 0.00 0.00 0.00 4.26
2942 7562 3.797256 ACGTAAAGATCATCAGTTAGCGC 59.203 43.478 0.00 0.00 0.00 5.92
2943 7563 3.182572 CGTAAAGATCATCAGTTAGCGCC 59.817 47.826 2.29 0.00 0.00 6.53
2944 7564 2.988010 AAGATCATCAGTTAGCGCCA 57.012 45.000 2.29 0.00 0.00 5.69
2945 7565 2.988010 AGATCATCAGTTAGCGCCAA 57.012 45.000 2.29 0.00 0.00 4.52
2946 7566 3.482156 AGATCATCAGTTAGCGCCAAT 57.518 42.857 2.29 0.00 0.00 3.16
2947 7567 3.136763 AGATCATCAGTTAGCGCCAATG 58.863 45.455 2.29 0.00 0.00 2.82
2948 7568 1.016627 TCATCAGTTAGCGCCAATGC 58.983 50.000 2.29 0.00 0.00 3.56
2950 7570 1.402968 CATCAGTTAGCGCCAATGCTT 59.597 47.619 2.29 0.00 44.46 3.91
2951 7571 1.086696 TCAGTTAGCGCCAATGCTTC 58.913 50.000 2.29 0.00 44.46 3.86
2952 7572 0.099436 CAGTTAGCGCCAATGCTTCC 59.901 55.000 2.29 0.00 44.46 3.46
2953 7573 1.032114 AGTTAGCGCCAATGCTTCCC 61.032 55.000 2.29 0.00 44.46 3.97
2954 7574 1.032114 GTTAGCGCCAATGCTTCCCT 61.032 55.000 2.29 0.00 44.46 4.20
2955 7575 1.031571 TTAGCGCCAATGCTTCCCTG 61.032 55.000 2.29 0.00 44.46 4.45
2956 7576 1.909459 TAGCGCCAATGCTTCCCTGA 61.909 55.000 2.29 0.00 44.46 3.86
2957 7577 2.123428 GCGCCAATGCTTCCCTGAT 61.123 57.895 0.00 0.00 34.43 2.90
2958 7578 2.028130 CGCCAATGCTTCCCTGATC 58.972 57.895 0.00 0.00 34.43 2.92
2959 7579 1.779025 CGCCAATGCTTCCCTGATCG 61.779 60.000 0.00 0.00 34.43 3.69
2960 7580 2.028130 CCAATGCTTCCCTGATCGC 58.972 57.895 0.00 0.00 0.00 4.58
2961 7581 1.450531 CCAATGCTTCCCTGATCGCC 61.451 60.000 0.00 0.00 0.00 5.54
2962 7582 0.749091 CAATGCTTCCCTGATCGCCA 60.749 55.000 0.00 0.00 0.00 5.69
2963 7583 0.184451 AATGCTTCCCTGATCGCCAT 59.816 50.000 0.00 0.00 0.00 4.40
2964 7584 0.536687 ATGCTTCCCTGATCGCCATG 60.537 55.000 0.00 0.00 0.00 3.66
2965 7585 2.550101 GCTTCCCTGATCGCCATGC 61.550 63.158 0.00 0.00 0.00 4.06
2966 7586 1.153107 CTTCCCTGATCGCCATGCA 60.153 57.895 0.00 0.00 0.00 3.96
2967 7587 0.536687 CTTCCCTGATCGCCATGCAT 60.537 55.000 0.00 0.00 0.00 3.96
2968 7588 0.106569 TTCCCTGATCGCCATGCATT 60.107 50.000 0.00 0.00 0.00 3.56
2969 7589 0.535780 TCCCTGATCGCCATGCATTC 60.536 55.000 0.00 0.00 0.00 2.67
2970 7590 1.572941 CCTGATCGCCATGCATTCG 59.427 57.895 10.86 10.86 0.00 3.34
2971 7591 0.881600 CCTGATCGCCATGCATTCGA 60.882 55.000 19.21 19.21 36.63 3.71
2972 7592 0.511653 CTGATCGCCATGCATTCGAG 59.488 55.000 20.81 7.29 35.61 4.04
2973 7593 0.881600 TGATCGCCATGCATTCGAGG 60.882 55.000 20.81 10.81 35.61 4.63
2974 7594 1.572085 GATCGCCATGCATTCGAGGG 61.572 60.000 20.81 10.48 35.61 4.30
2975 7595 2.329539 ATCGCCATGCATTCGAGGGT 62.330 55.000 20.81 6.84 35.61 4.34
2976 7596 1.227527 CGCCATGCATTCGAGGGTA 60.228 57.895 11.51 0.00 0.00 3.69
2977 7597 1.224069 CGCCATGCATTCGAGGGTAG 61.224 60.000 11.51 0.00 0.00 3.18
2978 7598 1.510480 GCCATGCATTCGAGGGTAGC 61.510 60.000 0.00 0.00 0.00 3.58
2979 7599 0.886490 CCATGCATTCGAGGGTAGCC 60.886 60.000 1.60 1.60 0.00 3.93
2980 7600 1.069765 ATGCATTCGAGGGTAGCCG 59.930 57.895 5.06 0.00 0.00 5.52
2981 7601 2.280186 GCATTCGAGGGTAGCCGG 60.280 66.667 5.06 0.00 0.00 6.13
2982 7602 2.421739 CATTCGAGGGTAGCCGGG 59.578 66.667 2.18 1.40 0.00 5.73
2983 7603 2.042230 ATTCGAGGGTAGCCGGGT 60.042 61.111 12.58 12.58 0.00 5.28
2984 7604 2.132352 ATTCGAGGGTAGCCGGGTC 61.132 63.158 10.79 1.36 0.00 4.46
2985 7605 4.828296 TCGAGGGTAGCCGGGTCC 62.828 72.222 10.79 11.67 0.00 4.46
2987 7607 4.828296 GAGGGTAGCCGGGTCCGA 62.828 72.222 10.79 0.00 42.83 4.55
2988 7608 4.153330 AGGGTAGCCGGGTCCGAT 62.153 66.667 10.79 1.08 42.83 4.18
2989 7609 2.203538 GGGTAGCCGGGTCCGATA 60.204 66.667 10.79 0.83 42.83 2.92
2990 7610 1.608627 GGGTAGCCGGGTCCGATAT 60.609 63.158 10.79 0.00 42.83 1.63
2991 7611 0.323725 GGGTAGCCGGGTCCGATATA 60.324 60.000 10.79 0.00 42.83 0.86
2992 7612 0.813821 GGTAGCCGGGTCCGATATAC 59.186 60.000 10.79 0.00 42.83 1.47
2993 7613 0.813821 GTAGCCGGGTCCGATATACC 59.186 60.000 10.79 0.00 42.83 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.902613 ACAACACATGTGGATTATTGAGG 57.097 39.130 28.64 5.75 41.93 3.86
1 2 7.201644 GGAGTACAACACATGTGGATTATTGAG 60.202 40.741 28.64 10.11 43.77 3.02
2 3 6.597672 GGAGTACAACACATGTGGATTATTGA 59.402 38.462 28.64 11.08 43.77 2.57
3 4 6.183360 GGGAGTACAACACATGTGGATTATTG 60.183 42.308 28.64 23.27 43.77 1.90
4 5 5.885912 GGGAGTACAACACATGTGGATTATT 59.114 40.000 28.64 11.49 43.77 1.40
5 6 5.191722 AGGGAGTACAACACATGTGGATTAT 59.808 40.000 28.64 7.93 43.77 1.28
6 7 4.534500 AGGGAGTACAACACATGTGGATTA 59.466 41.667 28.64 13.52 43.77 1.75
7 8 3.330701 AGGGAGTACAACACATGTGGATT 59.669 43.478 28.64 12.96 43.77 3.01
8 9 2.912956 AGGGAGTACAACACATGTGGAT 59.087 45.455 28.64 15.01 43.77 3.41
9 10 2.334977 AGGGAGTACAACACATGTGGA 58.665 47.619 28.64 9.13 43.77 4.02
10 11 2.859165 AGGGAGTACAACACATGTGG 57.141 50.000 28.64 14.90 43.77 4.17
11 12 2.736721 CGAAGGGAGTACAACACATGTG 59.263 50.000 24.25 24.25 43.77 3.21
12 13 2.367567 ACGAAGGGAGTACAACACATGT 59.632 45.455 0.00 0.00 46.36 3.21
13 14 3.040147 ACGAAGGGAGTACAACACATG 57.960 47.619 0.00 0.00 0.00 3.21
14 15 3.764237 AACGAAGGGAGTACAACACAT 57.236 42.857 0.00 0.00 0.00 3.21
15 16 3.547054 AAACGAAGGGAGTACAACACA 57.453 42.857 0.00 0.00 0.00 3.72
16 17 7.656707 TTTATAAACGAAGGGAGTACAACAC 57.343 36.000 0.00 0.00 0.00 3.32
23 24 9.955102 GGGATTATATTTATAAACGAAGGGAGT 57.045 33.333 0.00 0.00 32.45 3.85
66 67 9.026121 ACTCATTTTGCTCCGTATATAGTCTAT 57.974 33.333 0.00 0.00 0.00 1.98
67 68 8.297426 CACTCATTTTGCTCCGTATATAGTCTA 58.703 37.037 0.00 0.00 0.00 2.59
68 69 7.014326 TCACTCATTTTGCTCCGTATATAGTCT 59.986 37.037 0.00 0.00 0.00 3.24
69 70 7.145985 TCACTCATTTTGCTCCGTATATAGTC 58.854 38.462 0.00 0.00 0.00 2.59
70 71 7.050970 TCACTCATTTTGCTCCGTATATAGT 57.949 36.000 0.00 0.00 0.00 2.12
71 72 7.946655 TTCACTCATTTTGCTCCGTATATAG 57.053 36.000 0.00 0.00 0.00 1.31
72 73 8.367911 AGATTCACTCATTTTGCTCCGTATATA 58.632 33.333 0.00 0.00 0.00 0.86
73 74 7.220030 AGATTCACTCATTTTGCTCCGTATAT 58.780 34.615 0.00 0.00 0.00 0.86
74 75 6.582636 AGATTCACTCATTTTGCTCCGTATA 58.417 36.000 0.00 0.00 0.00 1.47
75 76 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
76 77 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
77 78 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
78 79 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
79 80 5.412594 TGTGTAGATTCACTCATTTTGCTCC 59.587 40.000 0.00 0.00 38.90 4.70
80 81 6.486253 TGTGTAGATTCACTCATTTTGCTC 57.514 37.500 0.00 0.00 38.90 4.26
81 82 7.392673 AGAATGTGTAGATTCACTCATTTTGCT 59.607 33.333 13.02 7.33 40.71 3.91
82 83 7.533426 AGAATGTGTAGATTCACTCATTTTGC 58.467 34.615 13.02 0.00 40.71 3.68
125 126 9.722184 ACGCAGACTACATACGGATATATATAT 57.278 33.333 4.86 4.86 0.00 0.86
126 127 9.551734 AACGCAGACTACATACGGATATATATA 57.448 33.333 0.00 0.00 0.00 0.86
127 128 8.343366 CAACGCAGACTACATACGGATATATAT 58.657 37.037 0.00 0.00 0.00 0.86
128 129 7.550196 TCAACGCAGACTACATACGGATATATA 59.450 37.037 0.00 0.00 0.00 0.86
129 130 6.373495 TCAACGCAGACTACATACGGATATAT 59.627 38.462 0.00 0.00 0.00 0.86
130 131 5.702209 TCAACGCAGACTACATACGGATATA 59.298 40.000 0.00 0.00 0.00 0.86
131 132 4.517832 TCAACGCAGACTACATACGGATAT 59.482 41.667 0.00 0.00 0.00 1.63
132 133 3.878699 TCAACGCAGACTACATACGGATA 59.121 43.478 0.00 0.00 0.00 2.59
133 134 2.686405 TCAACGCAGACTACATACGGAT 59.314 45.455 0.00 0.00 0.00 4.18
134 135 2.086094 TCAACGCAGACTACATACGGA 58.914 47.619 0.00 0.00 0.00 4.69
135 136 2.554806 TCAACGCAGACTACATACGG 57.445 50.000 0.00 0.00 0.00 4.02
136 137 4.798907 AGATTTCAACGCAGACTACATACG 59.201 41.667 0.00 0.00 0.00 3.06
137 138 6.037098 AGAGATTTCAACGCAGACTACATAC 58.963 40.000 0.00 0.00 0.00 2.39
180 181 3.319689 GCACCTATGTACTCCCTCTCTTC 59.680 52.174 0.00 0.00 0.00 2.87
273 279 7.306574 CCGAACTAAATTTGCTTCTCCAAAAAC 60.307 37.037 0.00 0.00 38.12 2.43
362 368 7.058525 TCATCATATCATCATGGGGATTAAGC 58.941 38.462 5.53 0.00 32.57 3.09
364 370 9.636789 GAATCATCATATCATCATGGGGATTAA 57.363 33.333 5.53 0.00 33.34 1.40
438 444 8.439964 TTTCATCCATAGTCATAGGATCATCA 57.560 34.615 0.00 0.00 40.07 3.07
445 451 8.455903 ACATGTTTTTCATCCATAGTCATAGG 57.544 34.615 0.00 0.00 34.09 2.57
450 456 7.698130 GCACTTACATGTTTTTCATCCATAGTC 59.302 37.037 2.30 0.00 34.09 2.59
470 500 4.662468 TGAAAACAATTGCCAGCACTTA 57.338 36.364 5.05 0.00 0.00 2.24
516 547 3.235195 CGAACAGAACCGAAGTAGACTG 58.765 50.000 0.00 0.00 0.00 3.51
602 638 2.353269 TCGAAAATTGTTGTGCTGTCGT 59.647 40.909 0.00 0.00 0.00 4.34
715 757 6.544197 ACTCTTGATCGATAAGTCTAGCTTGA 59.456 38.462 0.00 0.00 38.05 3.02
723 765 7.413219 CCGGATACTACTCTTGATCGATAAGTC 60.413 44.444 0.00 0.00 0.00 3.01
776 818 3.134442 AGAAGATGGAGATCACTTGGAGC 59.866 47.826 0.00 0.00 0.00 4.70
820 862 9.317936 CTTTATTCCTTTCTTGAAAAGTTTGCT 57.682 29.630 0.00 0.00 46.34 3.91
851 1532 1.376609 GCCTCGTGCAATACTTGGGG 61.377 60.000 0.00 0.00 40.77 4.96
895 1576 2.804828 AAGCGAGCGAGGGAAAAGGG 62.805 60.000 0.00 0.00 0.00 3.95
901 1582 4.116328 CACGAAGCGAGCGAGGGA 62.116 66.667 0.00 0.00 0.00 4.20
996 1966 6.501453 TCATGACAGGATCCATGGACATATTA 59.499 38.462 18.99 1.49 40.26 0.98
1029 1999 0.756442 CTCTCCTCCTCCTCCTGCTG 60.756 65.000 0.00 0.00 0.00 4.41
1035 2005 1.152546 GCCTCCTCTCCTCCTCCTC 60.153 68.421 0.00 0.00 0.00 3.71
1101 2071 2.753043 AGGCAGAGGCATTTGGCG 60.753 61.111 9.76 0.00 46.16 5.69
1593 4527 0.827368 GGAGTGATGGAGTCTGGACC 59.173 60.000 0.00 0.00 0.00 4.46
1596 4530 3.303938 AGTATGGAGTGATGGAGTCTGG 58.696 50.000 0.00 0.00 0.00 3.86
1598 4532 4.357325 ACAAGTATGGAGTGATGGAGTCT 58.643 43.478 0.00 0.00 0.00 3.24
1599 4533 4.744795 ACAAGTATGGAGTGATGGAGTC 57.255 45.455 0.00 0.00 0.00 3.36
1600 4534 4.080863 GGAACAAGTATGGAGTGATGGAGT 60.081 45.833 0.00 0.00 0.00 3.85
1602 4536 3.843619 TGGAACAAGTATGGAGTGATGGA 59.156 43.478 0.00 0.00 31.92 3.41
1603 4537 4.220693 TGGAACAAGTATGGAGTGATGG 57.779 45.455 0.00 0.00 31.92 3.51
1619 4557 7.032377 ACAAAAGAACTTCTGAAGATGGAAC 57.968 36.000 23.36 7.90 0.00 3.62
1690 6229 7.138736 CACCACGAAATTTAGACAAACTGAAT 58.861 34.615 5.22 0.00 36.58 2.57
1841 6427 1.007734 CAGGCACAAGCTTGCACAG 60.008 57.895 26.27 14.34 44.94 3.66
1905 6491 2.189191 GAGATGTGGGGCAGTGCAGA 62.189 60.000 18.61 0.00 0.00 4.26
1906 6492 1.748122 GAGATGTGGGGCAGTGCAG 60.748 63.158 18.61 0.00 0.00 4.41
1907 6493 2.352422 GAGATGTGGGGCAGTGCA 59.648 61.111 18.61 0.00 0.00 4.57
1908 6494 2.042831 GTGAGATGTGGGGCAGTGC 61.043 63.158 6.55 6.55 0.00 4.40
1909 6495 0.675837 CTGTGAGATGTGGGGCAGTG 60.676 60.000 0.00 0.00 0.00 3.66
1910 6496 0.837691 TCTGTGAGATGTGGGGCAGT 60.838 55.000 0.00 0.00 0.00 4.40
1911 6497 0.325933 TTCTGTGAGATGTGGGGCAG 59.674 55.000 0.00 0.00 0.00 4.85
1912 6498 0.325933 CTTCTGTGAGATGTGGGGCA 59.674 55.000 0.00 0.00 0.00 5.36
1913 6499 0.326264 ACTTCTGTGAGATGTGGGGC 59.674 55.000 0.00 0.00 32.24 5.80
1914 6500 1.947678 GCACTTCTGTGAGATGTGGGG 60.948 57.143 16.85 0.00 45.28 4.96
1915 6501 1.002888 AGCACTTCTGTGAGATGTGGG 59.997 52.381 16.85 0.00 45.28 4.61
1916 6502 2.028294 AGAGCACTTCTGTGAGATGTGG 60.028 50.000 16.85 4.33 45.28 4.17
1917 6503 3.316071 AGAGCACTTCTGTGAGATGTG 57.684 47.619 12.86 12.86 46.84 3.21
1918 6504 6.782082 TTATAGAGCACTTCTGTGAGATGT 57.218 37.500 0.00 0.00 46.55 3.06
1919 6505 6.200665 GCTTTATAGAGCACTTCTGTGAGATG 59.799 42.308 10.27 0.00 46.55 2.90
1920 6506 6.098124 AGCTTTATAGAGCACTTCTGTGAGAT 59.902 38.462 16.84 0.00 46.55 2.75
1921 6507 5.420421 AGCTTTATAGAGCACTTCTGTGAGA 59.580 40.000 16.84 0.00 46.55 3.27
1922 6508 5.659463 AGCTTTATAGAGCACTTCTGTGAG 58.341 41.667 16.84 0.00 46.55 3.51
1923 6509 5.667539 AGCTTTATAGAGCACTTCTGTGA 57.332 39.130 16.84 0.00 46.55 3.58
1924 6510 5.447010 GCAAGCTTTATAGAGCACTTCTGTG 60.447 44.000 16.84 4.99 45.12 3.66
1925 6511 4.633565 GCAAGCTTTATAGAGCACTTCTGT 59.366 41.667 16.84 0.00 45.12 3.41
1926 6512 4.034975 GGCAAGCTTTATAGAGCACTTCTG 59.965 45.833 16.84 7.29 45.12 3.02
1927 6513 4.195416 GGCAAGCTTTATAGAGCACTTCT 58.805 43.478 16.84 0.00 45.12 2.85
1928 6514 3.941483 TGGCAAGCTTTATAGAGCACTTC 59.059 43.478 16.84 5.23 45.12 3.01
1929 6515 3.691609 GTGGCAAGCTTTATAGAGCACTT 59.308 43.478 16.84 1.42 45.12 3.16
1930 6516 3.274288 GTGGCAAGCTTTATAGAGCACT 58.726 45.455 16.84 1.49 45.12 4.40
1931 6517 2.030946 CGTGGCAAGCTTTATAGAGCAC 59.969 50.000 16.84 5.51 45.12 4.40
1948 6561 1.658686 CTTCCCTCTCGACCTCGTGG 61.659 65.000 0.99 0.99 40.80 4.94
2029 6642 8.047911 TCTTATATTATGAGACGGAGGGAGTAG 58.952 40.741 0.00 0.00 0.00 2.57
2047 6660 9.136952 GTGTAGTGTCAAGAACGTTCTTATATT 57.863 33.333 35.97 24.14 45.23 1.28
2048 6661 8.521176 AGTGTAGTGTCAAGAACGTTCTTATAT 58.479 33.333 35.97 23.58 45.23 0.86
2049 6662 7.879070 AGTGTAGTGTCAAGAACGTTCTTATA 58.121 34.615 35.97 25.93 45.23 0.98
2050 6663 6.746120 AGTGTAGTGTCAAGAACGTTCTTAT 58.254 36.000 35.97 23.02 45.23 1.73
2051 6664 6.140303 AGTGTAGTGTCAAGAACGTTCTTA 57.860 37.500 35.97 22.29 45.23 2.10
2052 6665 6.183360 ACTAGTGTAGTGTCAAGAACGTTCTT 60.183 38.462 32.60 32.60 41.86 2.52
2053 6666 4.650754 AGTGTAGTGTCAAGAACGTTCT 57.349 40.909 24.93 24.93 39.74 3.01
2054 6667 5.517904 ACTAGTGTAGTGTCAAGAACGTTC 58.482 41.667 20.71 20.71 37.69 3.95
2055 6668 5.511234 ACTAGTGTAGTGTCAAGAACGTT 57.489 39.130 0.00 0.00 37.69 3.99
2084 6697 8.784043 GCTCCGTTCCATAATATAAGAACATTT 58.216 33.333 12.74 0.00 38.80 2.32
2085 6698 7.117812 CGCTCCGTTCCATAATATAAGAACATT 59.882 37.037 12.74 0.00 38.80 2.71
2086 6699 6.590292 CGCTCCGTTCCATAATATAAGAACAT 59.410 38.462 12.74 0.00 38.80 2.71
2087 6700 5.924254 CGCTCCGTTCCATAATATAAGAACA 59.076 40.000 12.74 0.00 38.80 3.18
2103 6716 0.957395 TCCGTTCTACTCGCTCCGTT 60.957 55.000 0.00 0.00 0.00 4.44
2150 6767 9.988815 CTTCTAGTCTAAAATAGCCATGTACAT 57.011 33.333 1.41 1.41 0.00 2.29
2276 6894 6.697455 TGCTTACGCATTTTCAACATTTACAA 59.303 30.769 0.00 0.00 42.25 2.41
2315 6935 6.767902 TGTAATTGGCTCTTCATAGATTGACC 59.232 38.462 0.00 0.00 32.84 4.02
2344 6964 4.630894 TTGTGTCAAGTTTTAGCACCAG 57.369 40.909 0.00 0.00 0.00 4.00
2411 7031 3.648339 ATGCACACCAAAGCTAAGTTG 57.352 42.857 0.00 0.00 0.00 3.16
2446 7066 4.391216 AGCATCATATTCTTATGCAGACGC 59.609 41.667 8.99 0.00 46.66 5.19
2453 7073 7.009083 GCGTCTAGTCAGCATCATATTCTTATG 59.991 40.741 0.00 0.00 37.19 1.90
2528 7148 1.991965 CAAAATAACATGCCACACGCC 59.008 47.619 0.00 0.00 36.24 5.68
2572 7192 2.104170 AGGGCTTTTCCGTGACAAAAA 58.896 42.857 0.00 0.00 34.94 1.94
2581 7201 2.639327 CCAAGGCAGGGCTTTTCCG 61.639 63.158 5.24 0.00 34.94 4.30
2625 7245 8.751302 AAAAAGCTTCGAAGTTTGTCTAAAAA 57.249 26.923 25.18 0.00 29.55 1.94
2630 7250 7.797123 CGTAATAAAAAGCTTCGAAGTTTGTCT 59.203 33.333 25.18 15.55 29.55 3.41
2631 7251 7.585210 ACGTAATAAAAAGCTTCGAAGTTTGTC 59.415 33.333 25.18 9.53 29.55 3.18
2632 7252 7.412063 ACGTAATAAAAAGCTTCGAAGTTTGT 58.588 30.769 25.18 18.51 29.55 2.83
2633 7253 7.201041 CGACGTAATAAAAAGCTTCGAAGTTTG 60.201 37.037 25.18 13.65 29.55 2.93
2634 7254 6.788930 CGACGTAATAAAAAGCTTCGAAGTTT 59.211 34.615 25.24 22.63 0.00 2.66
2635 7255 6.074142 ACGACGTAATAAAAAGCTTCGAAGTT 60.074 34.615 25.24 17.83 0.00 2.66
2636 7256 5.403466 ACGACGTAATAAAAAGCTTCGAAGT 59.597 36.000 25.24 10.34 0.00 3.01
2637 7257 5.840250 ACGACGTAATAAAAAGCTTCGAAG 58.160 37.500 21.02 21.02 0.00 3.79
2638 7258 5.401972 TGACGACGTAATAAAAAGCTTCGAA 59.598 36.000 0.00 0.00 0.00 3.71
2639 7259 4.916831 TGACGACGTAATAAAAAGCTTCGA 59.083 37.500 0.00 0.00 0.00 3.71
2640 7260 5.005192 GTGACGACGTAATAAAAAGCTTCG 58.995 41.667 0.00 0.00 0.00 3.79
2641 7261 5.908106 TGTGACGACGTAATAAAAAGCTTC 58.092 37.500 0.00 0.00 0.00 3.86
2642 7262 5.910637 TGTGACGACGTAATAAAAAGCTT 57.089 34.783 0.00 0.00 0.00 3.74
2643 7263 5.910637 TTGTGACGACGTAATAAAAAGCT 57.089 34.783 0.00 0.00 0.00 3.74
2644 7264 6.075280 ACATTGTGACGACGTAATAAAAAGC 58.925 36.000 0.00 0.00 0.00 3.51
2645 7265 8.483743 AAACATTGTGACGACGTAATAAAAAG 57.516 30.769 0.00 0.00 0.00 2.27
2646 7266 9.367717 GTAAACATTGTGACGACGTAATAAAAA 57.632 29.630 0.00 0.00 0.00 1.94
2647 7267 8.546244 TGTAAACATTGTGACGACGTAATAAAA 58.454 29.630 0.00 0.00 0.00 1.52
2648 7268 8.003224 GTGTAAACATTGTGACGACGTAATAAA 58.997 33.333 0.00 0.00 0.00 1.40
2649 7269 7.500691 GTGTAAACATTGTGACGACGTAATAA 58.499 34.615 0.00 0.00 0.00 1.40
2650 7270 6.183359 CGTGTAAACATTGTGACGACGTAATA 60.183 38.462 0.00 0.00 0.00 0.98
2651 7271 5.387649 CGTGTAAACATTGTGACGACGTAAT 60.388 40.000 0.00 0.00 0.00 1.89
2652 7272 4.085670 CGTGTAAACATTGTGACGACGTAA 60.086 41.667 0.00 0.00 0.00 3.18
2653 7273 3.421560 CGTGTAAACATTGTGACGACGTA 59.578 43.478 0.00 0.00 0.00 3.57
2654 7274 2.216940 CGTGTAAACATTGTGACGACGT 59.783 45.455 0.00 0.00 0.00 4.34
2655 7275 2.409244 CCGTGTAAACATTGTGACGACG 60.409 50.000 10.67 12.40 0.00 5.12
2656 7276 2.796031 TCCGTGTAAACATTGTGACGAC 59.204 45.455 10.67 0.00 0.00 4.34
2657 7277 2.796031 GTCCGTGTAAACATTGTGACGA 59.204 45.455 10.67 0.00 0.00 4.20
2658 7278 2.409244 CGTCCGTGTAAACATTGTGACG 60.409 50.000 8.54 8.54 38.42 4.35
2659 7279 2.796031 TCGTCCGTGTAAACATTGTGAC 59.204 45.455 0.00 0.00 0.00 3.67
2660 7280 3.095102 TCGTCCGTGTAAACATTGTGA 57.905 42.857 0.00 0.00 0.00 3.58
2661 7281 3.863396 TTCGTCCGTGTAAACATTGTG 57.137 42.857 0.00 0.00 0.00 3.33
2662 7282 4.121317 TCTTTCGTCCGTGTAAACATTGT 58.879 39.130 0.00 0.00 0.00 2.71
2663 7283 4.446385 TCTCTTTCGTCCGTGTAAACATTG 59.554 41.667 0.00 0.00 0.00 2.82
2664 7284 4.624015 TCTCTTTCGTCCGTGTAAACATT 58.376 39.130 0.00 0.00 0.00 2.71
2665 7285 4.235360 CTCTCTTTCGTCCGTGTAAACAT 58.765 43.478 0.00 0.00 0.00 2.71
2666 7286 3.067180 ACTCTCTTTCGTCCGTGTAAACA 59.933 43.478 0.00 0.00 0.00 2.83
2667 7287 3.636381 ACTCTCTTTCGTCCGTGTAAAC 58.364 45.455 0.00 0.00 0.00 2.01
2668 7288 3.304928 GGACTCTCTTTCGTCCGTGTAAA 60.305 47.826 0.00 0.00 40.18 2.01
2669 7289 2.227388 GGACTCTCTTTCGTCCGTGTAA 59.773 50.000 0.00 0.00 40.18 2.41
2670 7290 1.808945 GGACTCTCTTTCGTCCGTGTA 59.191 52.381 0.00 0.00 40.18 2.90
2671 7291 0.597072 GGACTCTCTTTCGTCCGTGT 59.403 55.000 0.00 0.00 40.18 4.49
2672 7292 3.403276 GGACTCTCTTTCGTCCGTG 57.597 57.895 0.00 0.00 40.18 4.94
2676 7296 0.109226 CGGGTGGACTCTCTTTCGTC 60.109 60.000 0.00 0.00 0.00 4.20
2677 7297 1.533469 CCGGGTGGACTCTCTTTCGT 61.533 60.000 0.00 0.00 37.49 3.85
2678 7298 1.215647 CCGGGTGGACTCTCTTTCG 59.784 63.158 0.00 0.00 37.49 3.46
2679 7299 1.079057 GCCGGGTGGACTCTCTTTC 60.079 63.158 2.18 0.00 37.49 2.62
2680 7300 1.536662 AGCCGGGTGGACTCTCTTT 60.537 57.895 4.72 0.00 37.49 2.52
2681 7301 2.120718 AGCCGGGTGGACTCTCTT 59.879 61.111 4.72 0.00 37.49 2.85
2682 7302 2.522198 ATCAGCCGGGTGGACTCTCT 62.522 60.000 31.91 6.92 37.49 3.10
2683 7303 2.022240 GATCAGCCGGGTGGACTCTC 62.022 65.000 31.91 16.96 37.49 3.20
2684 7304 2.039624 ATCAGCCGGGTGGACTCT 59.960 61.111 31.91 10.32 37.49 3.24
2685 7305 0.755698 TAGATCAGCCGGGTGGACTC 60.756 60.000 31.91 23.97 37.49 3.36
2686 7306 0.757188 CTAGATCAGCCGGGTGGACT 60.757 60.000 31.91 28.69 37.49 3.85
2687 7307 1.742768 CTAGATCAGCCGGGTGGAC 59.257 63.158 31.91 24.16 37.49 4.02
2688 7308 2.134287 GCTAGATCAGCCGGGTGGA 61.134 63.158 31.91 19.30 45.23 4.02
2689 7309 2.423446 GCTAGATCAGCCGGGTGG 59.577 66.667 31.91 17.20 45.23 4.61
2697 7317 1.600957 CGGCATGTTTGGCTAGATCAG 59.399 52.381 0.00 0.00 45.85 2.90
2698 7318 1.667236 CGGCATGTTTGGCTAGATCA 58.333 50.000 0.00 0.00 45.85 2.92
2699 7319 0.947244 CCGGCATGTTTGGCTAGATC 59.053 55.000 0.00 0.00 45.85 2.75
2700 7320 1.103398 GCCGGCATGTTTGGCTAGAT 61.103 55.000 24.80 0.00 45.85 1.98
2701 7321 1.748879 GCCGGCATGTTTGGCTAGA 60.749 57.895 24.80 0.00 45.85 2.43
2702 7322 2.800736 GCCGGCATGTTTGGCTAG 59.199 61.111 24.80 0.00 45.85 3.42
2706 7326 2.048316 GTTGGCCGGCATGTTTGG 60.048 61.111 30.85 0.00 0.00 3.28
2707 7327 1.373246 CAGTTGGCCGGCATGTTTG 60.373 57.895 30.85 15.36 0.00 2.93
2708 7328 2.573083 CCAGTTGGCCGGCATGTTT 61.573 57.895 30.85 6.30 0.00 2.83
2709 7329 2.419011 TACCAGTTGGCCGGCATGTT 62.419 55.000 30.85 11.94 39.32 2.71
2710 7330 2.819984 CTACCAGTTGGCCGGCATGT 62.820 60.000 30.85 16.75 39.32 3.21
2711 7331 2.045438 TACCAGTTGGCCGGCATG 60.045 61.111 30.85 19.85 39.32 4.06
2712 7332 2.272146 CTACCAGTTGGCCGGCAT 59.728 61.111 30.85 7.95 39.32 4.40
2713 7333 4.028490 CCTACCAGTTGGCCGGCA 62.028 66.667 30.85 12.04 39.32 5.69
2714 7334 2.552231 ATTCCTACCAGTTGGCCGGC 62.552 60.000 21.18 21.18 39.32 6.13
2715 7335 0.834612 TATTCCTACCAGTTGGCCGG 59.165 55.000 0.00 0.00 39.32 6.13
2716 7336 2.702592 TTATTCCTACCAGTTGGCCG 57.297 50.000 0.00 0.00 39.32 6.13
2717 7337 2.688446 GCTTTATTCCTACCAGTTGGCC 59.312 50.000 0.00 0.00 39.32 5.36
2718 7338 2.354821 CGCTTTATTCCTACCAGTTGGC 59.645 50.000 0.00 0.00 39.32 4.52
2719 7339 3.374058 CACGCTTTATTCCTACCAGTTGG 59.626 47.826 0.00 0.00 42.17 3.77
2720 7340 3.181510 GCACGCTTTATTCCTACCAGTTG 60.182 47.826 0.00 0.00 0.00 3.16
2721 7341 3.007635 GCACGCTTTATTCCTACCAGTT 58.992 45.455 0.00 0.00 0.00 3.16
2722 7342 2.236395 AGCACGCTTTATTCCTACCAGT 59.764 45.455 0.00 0.00 0.00 4.00
2723 7343 2.906354 AGCACGCTTTATTCCTACCAG 58.094 47.619 0.00 0.00 0.00 4.00
2724 7344 3.267483 GAAGCACGCTTTATTCCTACCA 58.733 45.455 5.63 0.00 36.26 3.25
2725 7345 2.284417 CGAAGCACGCTTTATTCCTACC 59.716 50.000 5.63 0.00 36.26 3.18
2726 7346 3.570939 CGAAGCACGCTTTATTCCTAC 57.429 47.619 5.63 0.00 36.26 3.18
2742 7362 2.097202 CGAGACTCACAAACTTGCGAAG 60.097 50.000 2.82 0.00 0.00 3.79
2743 7363 1.858458 CGAGACTCACAAACTTGCGAA 59.142 47.619 2.82 0.00 0.00 4.70
2744 7364 1.066454 TCGAGACTCACAAACTTGCGA 59.934 47.619 2.82 0.00 0.00 5.10
2745 7365 1.190323 GTCGAGACTCACAAACTTGCG 59.810 52.381 2.82 0.00 0.00 4.85
2746 7366 2.201732 TGTCGAGACTCACAAACTTGC 58.798 47.619 2.82 0.00 0.00 4.01
2747 7367 4.375405 CGAATGTCGAGACTCACAAACTTG 60.375 45.833 2.82 0.00 43.74 3.16
2748 7368 3.736252 CGAATGTCGAGACTCACAAACTT 59.264 43.478 2.82 0.00 43.74 2.66
2749 7369 3.004419 TCGAATGTCGAGACTCACAAACT 59.996 43.478 2.82 0.00 44.82 2.66
2750 7370 3.305964 TCGAATGTCGAGACTCACAAAC 58.694 45.455 2.82 4.68 44.82 2.93
2751 7371 3.636282 TCGAATGTCGAGACTCACAAA 57.364 42.857 2.82 0.00 44.82 2.83
2762 7382 1.944024 AGTCTAGGAGCTCGAATGTCG 59.056 52.381 7.83 0.00 42.10 4.35
2763 7383 2.946329 TGAGTCTAGGAGCTCGAATGTC 59.054 50.000 7.83 0.83 34.67 3.06
2764 7384 3.006112 TGAGTCTAGGAGCTCGAATGT 57.994 47.619 7.83 0.00 34.67 2.71
2765 7385 3.567585 TCATGAGTCTAGGAGCTCGAATG 59.432 47.826 7.83 1.38 34.67 2.67
2766 7386 3.568007 GTCATGAGTCTAGGAGCTCGAAT 59.432 47.826 7.83 0.00 34.67 3.34
2767 7387 2.946329 GTCATGAGTCTAGGAGCTCGAA 59.054 50.000 7.83 0.00 34.67 3.71
2768 7388 2.566913 GTCATGAGTCTAGGAGCTCGA 58.433 52.381 7.83 0.00 34.67 4.04
2769 7389 1.606668 GGTCATGAGTCTAGGAGCTCG 59.393 57.143 7.83 0.00 34.67 5.03
2770 7390 2.660572 TGGTCATGAGTCTAGGAGCTC 58.339 52.381 4.71 4.71 0.00 4.09
2771 7391 2.836636 TGGTCATGAGTCTAGGAGCT 57.163 50.000 0.00 0.00 0.00 4.09
2772 7392 5.736951 ATATTGGTCATGAGTCTAGGAGC 57.263 43.478 0.00 0.00 0.00 4.70
2773 7393 8.183104 TGTAATATTGGTCATGAGTCTAGGAG 57.817 38.462 0.00 0.00 0.00 3.69
2774 7394 8.588472 CATGTAATATTGGTCATGAGTCTAGGA 58.412 37.037 17.38 0.00 39.68 2.94
2775 7395 8.370940 ACATGTAATATTGGTCATGAGTCTAGG 58.629 37.037 23.70 7.24 39.68 3.02
2778 7398 9.716531 CATACATGTAATATTGGTCATGAGTCT 57.283 33.333 23.70 12.28 39.68 3.24
2779 7399 9.710900 TCATACATGTAATATTGGTCATGAGTC 57.289 33.333 23.70 0.00 39.68 3.36
2828 7448 9.276590 CAGTCTATGGAGCAATTATACATGAAA 57.723 33.333 0.00 0.00 0.00 2.69
2829 7449 8.432013 ACAGTCTATGGAGCAATTATACATGAA 58.568 33.333 0.00 0.00 0.00 2.57
2830 7450 7.966812 ACAGTCTATGGAGCAATTATACATGA 58.033 34.615 0.00 0.00 0.00 3.07
2831 7451 8.501580 CAACAGTCTATGGAGCAATTATACATG 58.498 37.037 0.00 0.00 0.00 3.21
2832 7452 8.213679 ACAACAGTCTATGGAGCAATTATACAT 58.786 33.333 0.00 0.00 0.00 2.29
2833 7453 7.564793 ACAACAGTCTATGGAGCAATTATACA 58.435 34.615 0.00 0.00 0.00 2.29
2834 7454 9.712305 ATACAACAGTCTATGGAGCAATTATAC 57.288 33.333 0.00 0.00 0.00 1.47
2836 7456 9.060347 CAATACAACAGTCTATGGAGCAATTAT 57.940 33.333 0.00 0.00 0.00 1.28
2837 7457 8.046708 ACAATACAACAGTCTATGGAGCAATTA 58.953 33.333 0.00 0.00 0.00 1.40
2838 7458 6.886459 ACAATACAACAGTCTATGGAGCAATT 59.114 34.615 0.00 0.00 0.00 2.32
2839 7459 6.418101 ACAATACAACAGTCTATGGAGCAAT 58.582 36.000 0.00 0.00 0.00 3.56
2840 7460 5.804639 ACAATACAACAGTCTATGGAGCAA 58.195 37.500 0.00 0.00 0.00 3.91
2841 7461 5.420725 ACAATACAACAGTCTATGGAGCA 57.579 39.130 0.00 0.00 0.00 4.26
2842 7462 5.643777 ACAACAATACAACAGTCTATGGAGC 59.356 40.000 0.00 0.00 0.00 4.70
2843 7463 7.099764 AGACAACAATACAACAGTCTATGGAG 58.900 38.462 0.00 0.00 34.83 3.86
2844 7464 7.004555 AGACAACAATACAACAGTCTATGGA 57.995 36.000 0.00 0.00 34.83 3.41
2845 7465 6.035005 CGAGACAACAATACAACAGTCTATGG 59.965 42.308 0.00 0.00 36.56 2.74
2846 7466 6.035005 CCGAGACAACAATACAACAGTCTATG 59.965 42.308 0.00 0.00 36.56 2.23
2847 7467 6.071560 TCCGAGACAACAATACAACAGTCTAT 60.072 38.462 0.00 0.00 36.56 1.98
2848 7468 5.242171 TCCGAGACAACAATACAACAGTCTA 59.758 40.000 0.00 0.00 36.56 2.59
2849 7469 4.038763 TCCGAGACAACAATACAACAGTCT 59.961 41.667 0.00 0.00 38.89 3.24
2850 7470 4.304110 TCCGAGACAACAATACAACAGTC 58.696 43.478 0.00 0.00 0.00 3.51
2851 7471 4.330944 TCCGAGACAACAATACAACAGT 57.669 40.909 0.00 0.00 0.00 3.55
2852 7472 4.690748 ACATCCGAGACAACAATACAACAG 59.309 41.667 0.00 0.00 0.00 3.16
2853 7473 4.637276 ACATCCGAGACAACAATACAACA 58.363 39.130 0.00 0.00 0.00 3.33
2854 7474 4.092968 GGACATCCGAGACAACAATACAAC 59.907 45.833 0.00 0.00 0.00 3.32
2855 7475 4.020573 AGGACATCCGAGACAACAATACAA 60.021 41.667 0.00 0.00 42.08 2.41
2856 7476 3.513912 AGGACATCCGAGACAACAATACA 59.486 43.478 0.00 0.00 42.08 2.29
2857 7477 4.113354 GAGGACATCCGAGACAACAATAC 58.887 47.826 0.00 0.00 42.08 1.89
2858 7478 3.181490 CGAGGACATCCGAGACAACAATA 60.181 47.826 0.00 0.00 42.08 1.90
2859 7479 2.417379 CGAGGACATCCGAGACAACAAT 60.417 50.000 0.00 0.00 42.08 2.71
2860 7480 1.067846 CGAGGACATCCGAGACAACAA 60.068 52.381 0.00 0.00 42.08 2.83
2861 7481 0.526211 CGAGGACATCCGAGACAACA 59.474 55.000 0.00 0.00 42.08 3.33
2862 7482 0.809385 TCGAGGACATCCGAGACAAC 59.191 55.000 0.00 0.00 42.08 3.32
2863 7483 0.809385 GTCGAGGACATCCGAGACAA 59.191 55.000 17.97 0.00 42.52 3.18
2864 7484 1.030488 GGTCGAGGACATCCGAGACA 61.030 60.000 21.78 0.00 43.73 3.41
2865 7485 1.030488 TGGTCGAGGACATCCGAGAC 61.030 60.000 15.85 15.85 42.37 3.36
2866 7486 1.030488 GTGGTCGAGGACATCCGAGA 61.030 60.000 0.00 0.00 42.08 4.04
2867 7487 1.433879 GTGGTCGAGGACATCCGAG 59.566 63.158 0.00 0.00 42.08 4.63
2868 7488 2.050350 GGTGGTCGAGGACATCCGA 61.050 63.158 0.00 0.00 42.08 4.55
2869 7489 2.348104 TGGTGGTCGAGGACATCCG 61.348 63.158 0.00 0.00 42.08 4.18
2870 7490 1.218316 GTGGTGGTCGAGGACATCC 59.782 63.158 0.00 0.00 33.68 3.51
2871 7491 1.218316 GGTGGTGGTCGAGGACATC 59.782 63.158 0.00 0.00 33.68 3.06
2872 7492 0.836400 AAGGTGGTGGTCGAGGACAT 60.836 55.000 0.00 0.00 33.68 3.06
2873 7493 1.052124 AAAGGTGGTGGTCGAGGACA 61.052 55.000 0.00 0.00 33.68 4.02
2874 7494 0.602905 CAAAGGTGGTGGTCGAGGAC 60.603 60.000 0.00 0.00 0.00 3.85
2875 7495 0.761323 TCAAAGGTGGTGGTCGAGGA 60.761 55.000 0.00 0.00 0.00 3.71
2876 7496 0.320771 CTCAAAGGTGGTGGTCGAGG 60.321 60.000 0.00 0.00 0.00 4.63
2877 7497 0.393077 ACTCAAAGGTGGTGGTCGAG 59.607 55.000 0.00 0.00 0.00 4.04
2878 7498 0.391597 GACTCAAAGGTGGTGGTCGA 59.608 55.000 0.00 0.00 0.00 4.20
2879 7499 0.602905 GGACTCAAAGGTGGTGGTCG 60.603 60.000 0.00 0.00 0.00 4.79
2880 7500 0.602905 CGGACTCAAAGGTGGTGGTC 60.603 60.000 0.00 0.00 0.00 4.02
2881 7501 1.052124 TCGGACTCAAAGGTGGTGGT 61.052 55.000 0.00 0.00 0.00 4.16
2882 7502 0.602905 GTCGGACTCAAAGGTGGTGG 60.603 60.000 0.00 0.00 0.00 4.61
2883 7503 0.944311 CGTCGGACTCAAAGGTGGTG 60.944 60.000 6.57 0.00 0.00 4.17
2884 7504 1.366366 CGTCGGACTCAAAGGTGGT 59.634 57.895 6.57 0.00 0.00 4.16
2885 7505 2.027625 GCGTCGGACTCAAAGGTGG 61.028 63.158 6.57 0.00 0.00 4.61
2886 7506 2.027625 GGCGTCGGACTCAAAGGTG 61.028 63.158 6.57 0.00 0.00 4.00
2887 7507 2.342648 GGCGTCGGACTCAAAGGT 59.657 61.111 6.57 0.00 0.00 3.50
2888 7508 2.027625 GTGGCGTCGGACTCAAAGG 61.028 63.158 6.57 0.00 0.00 3.11
2889 7509 0.600255 AAGTGGCGTCGGACTCAAAG 60.600 55.000 6.57 0.00 0.00 2.77
2890 7510 0.878523 CAAGTGGCGTCGGACTCAAA 60.879 55.000 6.57 0.00 0.00 2.69
2891 7511 1.300620 CAAGTGGCGTCGGACTCAA 60.301 57.895 6.57 0.00 0.00 3.02
2892 7512 2.338620 CAAGTGGCGTCGGACTCA 59.661 61.111 6.57 1.97 0.00 3.41
2893 7513 2.227089 ATCCAAGTGGCGTCGGACTC 62.227 60.000 6.57 0.00 34.44 3.36
2894 7514 2.283529 ATCCAAGTGGCGTCGGACT 61.284 57.895 6.57 0.00 34.44 3.85
2895 7515 2.100631 CATCCAAGTGGCGTCGGAC 61.101 63.158 0.00 0.00 34.44 4.79
2896 7516 2.107041 AACATCCAAGTGGCGTCGGA 62.107 55.000 0.00 0.00 34.44 4.55
2897 7517 0.390603 TAACATCCAAGTGGCGTCGG 60.391 55.000 0.00 0.00 34.44 4.79
2898 7518 0.999406 CTAACATCCAAGTGGCGTCG 59.001 55.000 0.00 0.00 34.44 5.12
2899 7519 0.727398 GCTAACATCCAAGTGGCGTC 59.273 55.000 0.00 0.00 34.44 5.19
2900 7520 0.676782 GGCTAACATCCAAGTGGCGT 60.677 55.000 0.00 0.00 34.44 5.68
2901 7521 0.676466 TGGCTAACATCCAAGTGGCG 60.676 55.000 0.00 0.00 34.44 5.69
2902 7522 0.811281 GTGGCTAACATCCAAGTGGC 59.189 55.000 0.00 0.00 35.01 5.01
2903 7523 1.086696 CGTGGCTAACATCCAAGTGG 58.913 55.000 0.00 0.00 35.01 4.00
2904 7524 1.808411 ACGTGGCTAACATCCAAGTG 58.192 50.000 0.10 0.00 43.03 3.16
2905 7525 3.688694 TTACGTGGCTAACATCCAAGT 57.311 42.857 0.00 5.96 45.68 3.16
2906 7526 4.250464 TCTTTACGTGGCTAACATCCAAG 58.750 43.478 0.00 0.00 38.71 3.61
2907 7527 4.274602 TCTTTACGTGGCTAACATCCAA 57.725 40.909 0.00 0.00 35.01 3.53
2908 7528 3.965379 TCTTTACGTGGCTAACATCCA 57.035 42.857 0.00 0.00 0.00 3.41
2909 7529 4.439057 TGATCTTTACGTGGCTAACATCC 58.561 43.478 0.00 0.00 0.00 3.51
2910 7530 5.753438 TGATGATCTTTACGTGGCTAACATC 59.247 40.000 0.00 7.82 0.00 3.06
2911 7531 5.670485 TGATGATCTTTACGTGGCTAACAT 58.330 37.500 0.00 0.00 0.00 2.71
2912 7532 5.079689 TGATGATCTTTACGTGGCTAACA 57.920 39.130 0.00 0.00 0.00 2.41
2913 7533 5.109903 ACTGATGATCTTTACGTGGCTAAC 58.890 41.667 0.00 0.00 0.00 2.34
2914 7534 5.339008 ACTGATGATCTTTACGTGGCTAA 57.661 39.130 0.00 0.00 0.00 3.09
2915 7535 5.339008 AACTGATGATCTTTACGTGGCTA 57.661 39.130 0.00 0.00 0.00 3.93
2916 7536 3.895232 ACTGATGATCTTTACGTGGCT 57.105 42.857 0.00 0.00 0.00 4.75
2917 7537 4.025647 GCTAACTGATGATCTTTACGTGGC 60.026 45.833 0.00 0.00 0.00 5.01
2918 7538 4.207224 CGCTAACTGATGATCTTTACGTGG 59.793 45.833 0.00 0.00 0.00 4.94
2919 7539 4.317418 GCGCTAACTGATGATCTTTACGTG 60.317 45.833 0.00 0.00 0.00 4.49
2920 7540 3.797256 GCGCTAACTGATGATCTTTACGT 59.203 43.478 0.00 0.00 0.00 3.57
2921 7541 3.182572 GGCGCTAACTGATGATCTTTACG 59.817 47.826 7.64 1.11 0.00 3.18
2922 7542 4.119862 TGGCGCTAACTGATGATCTTTAC 58.880 43.478 7.64 0.00 0.00 2.01
2923 7543 4.400529 TGGCGCTAACTGATGATCTTTA 57.599 40.909 7.64 0.00 0.00 1.85
2924 7544 3.266510 TGGCGCTAACTGATGATCTTT 57.733 42.857 7.64 0.00 0.00 2.52
2925 7545 2.988010 TGGCGCTAACTGATGATCTT 57.012 45.000 7.64 0.00 0.00 2.40
2926 7546 2.988010 TTGGCGCTAACTGATGATCT 57.012 45.000 7.64 0.00 0.00 2.75
2927 7547 2.350197 GCATTGGCGCTAACTGATGATC 60.350 50.000 8.88 0.00 0.00 2.92
2928 7548 1.605710 GCATTGGCGCTAACTGATGAT 59.394 47.619 8.88 0.00 0.00 2.45
2929 7549 1.016627 GCATTGGCGCTAACTGATGA 58.983 50.000 8.88 0.00 0.00 2.92
2930 7550 3.539253 GCATTGGCGCTAACTGATG 57.461 52.632 8.88 4.22 0.00 3.07
2941 7561 2.028130 CGATCAGGGAAGCATTGGC 58.972 57.895 0.00 0.00 41.61 4.52
2942 7562 1.450531 GGCGATCAGGGAAGCATTGG 61.451 60.000 0.00 0.00 0.00 3.16
2943 7563 0.749091 TGGCGATCAGGGAAGCATTG 60.749 55.000 0.00 0.00 0.00 2.82
2944 7564 0.184451 ATGGCGATCAGGGAAGCATT 59.816 50.000 0.00 0.00 0.00 3.56
2945 7565 0.536687 CATGGCGATCAGGGAAGCAT 60.537 55.000 0.00 0.00 0.00 3.79
2946 7566 1.153107 CATGGCGATCAGGGAAGCA 60.153 57.895 0.00 0.00 0.00 3.91
2947 7567 2.550101 GCATGGCGATCAGGGAAGC 61.550 63.158 0.00 0.00 0.00 3.86
2948 7568 0.536687 ATGCATGGCGATCAGGGAAG 60.537 55.000 0.00 0.00 30.03 3.46
2949 7569 0.106569 AATGCATGGCGATCAGGGAA 60.107 50.000 0.00 0.00 30.03 3.97
2950 7570 0.535780 GAATGCATGGCGATCAGGGA 60.536 55.000 0.00 0.00 30.94 4.20
2951 7571 1.848932 CGAATGCATGGCGATCAGGG 61.849 60.000 14.93 0.00 0.00 4.45
2952 7572 0.881600 TCGAATGCATGGCGATCAGG 60.882 55.000 17.75 0.00 0.00 3.86
2953 7573 0.511653 CTCGAATGCATGGCGATCAG 59.488 55.000 20.72 9.47 33.20 2.90
2954 7574 0.881600 CCTCGAATGCATGGCGATCA 60.882 55.000 20.72 4.29 33.20 2.92
2955 7575 1.572085 CCCTCGAATGCATGGCGATC 61.572 60.000 20.72 5.46 33.20 3.69
2956 7576 1.598962 CCCTCGAATGCATGGCGAT 60.599 57.895 20.72 0.00 33.20 4.58
2957 7577 1.681486 TACCCTCGAATGCATGGCGA 61.681 55.000 19.69 19.69 0.00 5.54
2958 7578 1.224069 CTACCCTCGAATGCATGGCG 61.224 60.000 14.13 14.13 0.00 5.69
2959 7579 1.510480 GCTACCCTCGAATGCATGGC 61.510 60.000 0.00 0.00 0.00 4.40
2960 7580 0.886490 GGCTACCCTCGAATGCATGG 60.886 60.000 0.00 0.00 0.00 3.66
2961 7581 1.224069 CGGCTACCCTCGAATGCATG 61.224 60.000 0.00 0.00 0.00 4.06
2962 7582 1.069765 CGGCTACCCTCGAATGCAT 59.930 57.895 0.00 0.00 0.00 3.96
2963 7583 2.499205 CGGCTACCCTCGAATGCA 59.501 61.111 0.00 0.00 0.00 3.96
2964 7584 2.280186 CCGGCTACCCTCGAATGC 60.280 66.667 0.00 0.00 0.00 3.56
2965 7585 2.365095 GACCCGGCTACCCTCGAATG 62.365 65.000 0.00 0.00 0.00 2.67
2966 7586 2.042230 ACCCGGCTACCCTCGAAT 60.042 61.111 0.00 0.00 0.00 3.34
2967 7587 2.757099 GACCCGGCTACCCTCGAA 60.757 66.667 0.00 0.00 0.00 3.71
2968 7588 4.828296 GGACCCGGCTACCCTCGA 62.828 72.222 0.00 0.00 0.00 4.04
2970 7590 2.703675 TATCGGACCCGGCTACCCTC 62.704 65.000 8.73 0.00 40.25 4.30
2971 7591 2.090377 ATATCGGACCCGGCTACCCT 62.090 60.000 8.73 0.00 40.25 4.34
2972 7592 0.323725 TATATCGGACCCGGCTACCC 60.324 60.000 8.73 0.00 40.25 3.69
2973 7593 0.813821 GTATATCGGACCCGGCTACC 59.186 60.000 8.73 0.00 40.25 3.18
2974 7594 0.813821 GGTATATCGGACCCGGCTAC 59.186 60.000 8.73 7.75 40.25 3.58
2975 7595 3.271250 GGTATATCGGACCCGGCTA 57.729 57.895 8.73 1.80 40.25 3.93
2976 7596 4.108673 GGTATATCGGACCCGGCT 57.891 61.111 8.73 0.00 40.25 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.