Multiple sequence alignment - TraesCS5A01G214900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G214900 chr5A 100.000 5357 0 0 1 5357 430246426 430241070 0.000000e+00 9893.0
1 TraesCS5A01G214900 chr5A 85.417 384 34 16 4708 5077 460410911 460411286 3.920000e-101 379.0
2 TraesCS5A01G214900 chr5A 80.556 144 24 4 1750 1891 427371204 427371063 2.040000e-19 108.0
3 TraesCS5A01G214900 chr5D 93.829 1345 63 13 2140 3476 326374360 326375692 0.000000e+00 2006.0
4 TraesCS5A01G214900 chr5D 91.821 917 46 15 3495 4389 326375680 326376589 0.000000e+00 1251.0
5 TraesCS5A01G214900 chr5D 87.152 755 47 24 1393 2116 326373228 326373963 0.000000e+00 811.0
6 TraesCS5A01G214900 chr5D 88.258 511 37 13 848 1357 326372738 326373226 1.660000e-164 590.0
7 TraesCS5A01G214900 chr5D 92.640 394 27 2 1 394 326370084 326370475 2.800000e-157 566.0
8 TraesCS5A01G214900 chr5D 87.607 234 25 4 5078 5309 326377046 326377277 8.840000e-68 268.0
9 TraesCS5A01G214900 chr5D 80.405 148 25 3 1750 1895 329258468 329258613 5.670000e-20 110.0
10 TraesCS5A01G214900 chr5D 97.674 43 1 0 1634 1676 470989398 470989356 2.070000e-09 75.0
11 TraesCS5A01G214900 chr5B 90.265 1469 87 33 525 1966 378816954 378818393 0.000000e+00 1869.0
12 TraesCS5A01G214900 chr5B 94.263 1011 46 7 2191 3199 378819240 378820240 0.000000e+00 1535.0
13 TraesCS5A01G214900 chr5B 88.776 1078 58 29 3543 4578 378820240 378821296 0.000000e+00 1262.0
14 TraesCS5A01G214900 chr5B 89.300 486 36 6 1 485 378816483 378816953 3.570000e-166 595.0
15 TraesCS5A01G214900 chr5B 86.076 158 19 3 1962 2116 378818487 378818644 3.320000e-37 167.0
16 TraesCS5A01G214900 chr5B 82.171 129 19 3 1750 1876 382360170 382360296 2.040000e-19 108.0
17 TraesCS5A01G214900 chr5B 97.674 43 1 0 1634 1676 354939230 354939188 2.070000e-09 75.0
18 TraesCS5A01G214900 chr3A 90.625 384 19 6 4709 5078 53727277 53726897 1.340000e-135 494.0
19 TraesCS5A01G214900 chr3A 87.023 393 32 10 4709 5085 419475555 419475166 4.960000e-115 425.0
20 TraesCS5A01G214900 chr3A 85.642 397 35 12 4704 5081 667945649 667945256 1.080000e-106 398.0
21 TraesCS5A01G214900 chr3A 84.672 411 37 16 4704 5096 533961135 533960733 2.340000e-103 387.0
22 TraesCS5A01G214900 chr3A 84.595 383 36 14 4710 5077 19528052 19527678 5.100000e-95 359.0
23 TraesCS5A01G214900 chr3A 100.000 44 0 0 5314 5357 673485009 673484966 1.240000e-11 82.4
24 TraesCS5A01G214900 chr7A 88.601 386 24 11 4710 5078 700429549 700429167 8.180000e-123 451.0
25 TraesCS5A01G214900 chr7A 88.052 385 26 11 4711 5078 498486816 498487197 6.370000e-119 438.0
26 TraesCS5A01G214900 chr7A 87.113 388 26 13 4709 5077 469362078 469362460 8.300000e-113 418.0
27 TraesCS5A01G214900 chr2A 87.374 396 27 14 4709 5087 100885222 100884833 2.960000e-117 433.0
28 TraesCS5A01G214900 chr2A 83.744 406 39 17 4699 5087 733109362 733108967 5.100000e-95 359.0
29 TraesCS5A01G214900 chr7D 86.802 394 31 11 4710 5086 617060777 617060388 2.310000e-113 420.0
30 TraesCS5A01G214900 chr6A 86.494 385 33 12 4709 5077 249346129 249346510 6.460000e-109 405.0
31 TraesCS5A01G214900 chr6A 85.417 384 33 14 4710 5078 601004607 601004232 1.410000e-100 377.0
32 TraesCS5A01G214900 chr4A 84.896 384 36 16 4708 5077 146663783 146664158 8.480000e-98 368.0
33 TraesCS5A01G214900 chr1B 85.333 375 34 11 4710 5078 567464940 567464581 8.480000e-98 368.0
34 TraesCS5A01G214900 chr1B 100.000 44 0 0 5314 5357 638696327 638696370 1.240000e-11 82.4
35 TraesCS5A01G214900 chr1B 97.674 43 1 0 1634 1676 265163123 265163081 2.070000e-09 75.0
36 TraesCS5A01G214900 chrUn 100.000 44 0 0 5314 5357 425818753 425818796 1.240000e-11 82.4
37 TraesCS5A01G214900 chr6B 100.000 44 0 0 5314 5357 306991652 306991695 1.240000e-11 82.4
38 TraesCS5A01G214900 chr4D 100.000 44 0 0 5314 5357 123304227 123304184 1.240000e-11 82.4
39 TraesCS5A01G214900 chr4D 100.000 44 0 0 5314 5357 123720840 123720797 1.240000e-11 82.4
40 TraesCS5A01G214900 chr4D 95.652 46 2 0 1631 1676 269282449 269282494 2.070000e-09 75.0
41 TraesCS5A01G214900 chr4B 100.000 44 0 0 5314 5357 209073183 209073226 1.240000e-11 82.4
42 TraesCS5A01G214900 chr3D 100.000 44 0 0 5314 5357 193418582 193418539 1.240000e-11 82.4
43 TraesCS5A01G214900 chr3D 92.593 54 2 2 1634 1686 332623057 332623005 5.750000e-10 76.8
44 TraesCS5A01G214900 chr1D 100.000 44 0 0 5314 5357 327238765 327238722 1.240000e-11 82.4
45 TraesCS5A01G214900 chr1D 97.674 43 1 0 1634 1676 37302489 37302447 2.070000e-09 75.0
46 TraesCS5A01G214900 chr7B 94.000 50 2 1 1634 1683 236545563 236545515 2.070000e-09 75.0
47 TraesCS5A01G214900 chr6D 97.674 43 1 0 1634 1676 152654690 152654648 2.070000e-09 75.0
48 TraesCS5A01G214900 chr1A 95.652 46 2 0 1631 1676 567755958 567756003 2.070000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G214900 chr5A 430241070 430246426 5356 True 9893.000000 9893 100.000000 1 5357 1 chr5A.!!$R2 5356
1 TraesCS5A01G214900 chr5D 326370084 326377277 7193 False 915.333333 2006 90.217833 1 5309 6 chr5D.!!$F2 5308
2 TraesCS5A01G214900 chr5B 378816483 378821296 4813 False 1085.600000 1869 89.736000 1 4578 5 chr5B.!!$F2 4577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
901 2774 0.096628 CAAGATGCACAGCTCGCTTC 59.903 55.0 10.92 10.92 34.63 3.86 F
1624 3505 0.383949 GACCGAGATCTCAGGTCAGC 59.616 60.0 35.91 22.98 44.67 4.26 F
1775 3670 1.021920 GCAAGGCCCTCTTCTTCGTC 61.022 60.0 0.00 0.00 32.41 4.20 F
3254 5933 0.323302 TTGAATCTAGTGCCACGCCA 59.677 50.0 0.00 0.00 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2181 4854 0.106918 AGGTGTGCGTCCCTCAAAAA 60.107 50.0 0.00 0.00 0.00 1.94 R
3251 5930 0.957395 AGTGTGTAGCATGCTGTGGC 60.957 55.0 30.42 16.72 39.26 5.01 R
3732 6428 0.179056 CCAAGGTGGACGAACACACT 60.179 55.0 14.20 7.60 40.96 3.55 R
4797 7595 0.029577 TATGATAGTGGGGGTGGGCA 60.030 55.0 0.00 0.00 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.747436 GCCAAGAAAAACAAGGAGCAG 58.253 47.619 0.00 0.00 0.00 4.24
70 71 0.949105 CCGAAAACCCTGAGTGACCG 60.949 60.000 0.00 0.00 0.00 4.79
72 73 1.228154 AAAACCCTGAGTGACCGCC 60.228 57.895 0.00 0.00 0.00 6.13
95 96 4.822896 CGGAGAAGGCTAGTATCTGTAACT 59.177 45.833 0.00 0.00 0.00 2.24
183 184 3.102052 TCAAACCTGTGTACGGACTTC 57.898 47.619 0.00 0.00 0.00 3.01
197 198 1.603172 GGACTTCGGCATCAGTATCGG 60.603 57.143 0.00 0.00 0.00 4.18
208 209 0.531532 CAGTATCGGGGCAGCTTCTG 60.532 60.000 0.00 0.00 34.12 3.02
237 238 5.361857 AGACATAAGCATGGAATTTTGGAGG 59.638 40.000 0.00 0.00 36.39 4.30
342 344 7.619302 ACATGGTTAAGTTTGGTTATCATGGAT 59.381 33.333 0.00 0.00 33.15 3.41
367 369 1.473677 TGCCTTTTCTGAATCCGCATG 59.526 47.619 0.00 0.00 0.00 4.06
369 371 2.094545 GCCTTTTCTGAATCCGCATGTT 60.095 45.455 0.00 0.00 0.00 2.71
389 391 5.495640 TGTTCTCCATTTTTGCAACCTTTT 58.504 33.333 0.00 0.00 0.00 2.27
413 415 7.537596 TTCTTTATCCATGGTGTTGTGAATT 57.462 32.000 12.58 0.00 0.00 2.17
481 2267 2.424842 TTAGGCCAGCCCCTTGTGTG 62.425 60.000 5.01 0.00 36.41 3.82
494 2280 1.605710 CTTGTGTGGCTGAACCTTGAG 59.394 52.381 0.00 0.00 40.22 3.02
499 2285 2.106338 TGTGGCTGAACCTTGAGATTGA 59.894 45.455 0.00 0.00 40.22 2.57
501 2287 2.087646 GGCTGAACCTTGAGATTGACC 58.912 52.381 0.00 0.00 34.51 4.02
504 2290 2.738846 CTGAACCTTGAGATTGACCACG 59.261 50.000 0.00 0.00 0.00 4.94
505 2291 1.464997 GAACCTTGAGATTGACCACGC 59.535 52.381 0.00 0.00 0.00 5.34
506 2292 0.396435 ACCTTGAGATTGACCACGCA 59.604 50.000 0.00 0.00 0.00 5.24
507 2293 1.003580 ACCTTGAGATTGACCACGCAT 59.996 47.619 0.00 0.00 0.00 4.73
508 2294 1.667724 CCTTGAGATTGACCACGCATC 59.332 52.381 0.00 0.00 0.00 3.91
509 2295 1.667724 CTTGAGATTGACCACGCATCC 59.332 52.381 0.00 0.00 0.00 3.51
510 2296 0.904649 TGAGATTGACCACGCATCCT 59.095 50.000 0.00 0.00 0.00 3.24
511 2297 1.134699 TGAGATTGACCACGCATCCTC 60.135 52.381 0.00 0.00 0.00 3.71
512 2298 1.137872 GAGATTGACCACGCATCCTCT 59.862 52.381 0.00 0.00 0.00 3.69
513 2299 1.134580 AGATTGACCACGCATCCTCTG 60.135 52.381 0.00 0.00 0.00 3.35
514 2300 0.107508 ATTGACCACGCATCCTCTGG 60.108 55.000 0.00 0.00 0.00 3.86
515 2301 2.184020 TTGACCACGCATCCTCTGGG 62.184 60.000 0.00 0.00 43.21 4.45
516 2302 4.101448 ACCACGCATCCTCTGGGC 62.101 66.667 0.00 0.00 41.36 5.36
517 2303 4.100084 CCACGCATCCTCTGGGCA 62.100 66.667 0.00 0.00 41.36 5.36
518 2304 2.191375 CACGCATCCTCTGGGCAT 59.809 61.111 0.00 0.00 41.36 4.40
519 2305 1.447217 CACGCATCCTCTGGGCATA 59.553 57.895 0.00 0.00 41.36 3.14
520 2306 0.882042 CACGCATCCTCTGGGCATAC 60.882 60.000 0.00 0.00 41.36 2.39
521 2307 1.337384 ACGCATCCTCTGGGCATACA 61.337 55.000 0.00 0.00 41.36 2.29
522 2308 0.602106 CGCATCCTCTGGGCATACAG 60.602 60.000 0.00 0.00 39.84 2.74
523 2309 0.250640 GCATCCTCTGGGCATACAGG 60.251 60.000 3.00 0.00 38.98 4.00
566 2352 6.483640 ACCACTAAGTGAAGCTTGTCTTAAAG 59.516 38.462 2.10 6.14 38.05 1.85
587 2378 3.009473 AGAAGTAGGAATTGCTCTGCCAA 59.991 43.478 1.37 0.00 0.00 4.52
600 2391 3.260740 CTCTGCCAAATCTCACTCAGTC 58.739 50.000 0.00 0.00 0.00 3.51
606 2397 3.496692 CCAAATCTCACTCAGTCCCACAA 60.497 47.826 0.00 0.00 0.00 3.33
608 2399 0.673985 TCTCACTCAGTCCCACAACG 59.326 55.000 0.00 0.00 0.00 4.10
642 2433 2.876550 GGTGACCACTCACTTAAACCAC 59.123 50.000 0.00 0.00 45.56 4.16
644 2435 3.311596 GTGACCACTCACTTAAACCACAC 59.688 47.826 0.00 0.00 43.26 3.82
695 2486 6.131961 AGTTAGCAATTGAAATATCCTGGCT 58.868 36.000 10.34 0.00 0.00 4.75
764 2564 5.184340 CATTGATGCCAAAGAATCTCTCC 57.816 43.478 0.00 0.00 35.67 3.71
780 2580 6.796867 ATCTCTCCTCTACTCTTAATCCCT 57.203 41.667 0.00 0.00 0.00 4.20
804 2604 1.673665 CTGCCAGTGGAGGTCAAGC 60.674 63.158 15.20 0.00 0.00 4.01
815 2615 2.494059 GAGGTCAAGCAAGTGCACTTA 58.506 47.619 30.67 13.27 45.16 2.24
818 2618 3.891366 AGGTCAAGCAAGTGCACTTAAAT 59.109 39.130 30.67 16.81 45.16 1.40
819 2619 3.983344 GGTCAAGCAAGTGCACTTAAATG 59.017 43.478 30.67 25.56 45.16 2.32
820 2620 4.499696 GGTCAAGCAAGTGCACTTAAATGT 60.500 41.667 30.67 12.38 45.16 2.71
821 2621 4.676924 GTCAAGCAAGTGCACTTAAATGTC 59.323 41.667 30.67 20.64 45.16 3.06
897 2770 1.136141 GTTGACAAGATGCACAGCTCG 60.136 52.381 0.00 0.00 0.00 5.03
898 2771 1.293963 TGACAAGATGCACAGCTCGC 61.294 55.000 0.00 0.00 0.00 5.03
899 2772 1.004080 ACAAGATGCACAGCTCGCT 60.004 52.632 6.24 0.00 0.00 4.93
900 2773 0.604780 ACAAGATGCACAGCTCGCTT 60.605 50.000 6.24 0.00 0.00 4.68
901 2774 0.096628 CAAGATGCACAGCTCGCTTC 59.903 55.000 10.92 10.92 34.63 3.86
902 2775 1.023513 AAGATGCACAGCTCGCTTCC 61.024 55.000 13.90 1.87 34.89 3.46
903 2776 1.449246 GATGCACAGCTCGCTTCCT 60.449 57.895 6.24 0.00 0.00 3.36
904 2777 1.002868 ATGCACAGCTCGCTTCCTT 60.003 52.632 6.24 0.00 0.00 3.36
905 2778 1.023513 ATGCACAGCTCGCTTCCTTC 61.024 55.000 6.24 0.00 0.00 3.46
906 2779 1.375268 GCACAGCTCGCTTCCTTCT 60.375 57.895 0.00 0.00 0.00 2.85
979 2860 1.632422 GCTTTGATTCGCCACCATTG 58.368 50.000 0.00 0.00 0.00 2.82
1146 3027 4.802051 ATGGCGGCTGCGTTGGAT 62.802 61.111 12.29 0.00 44.10 3.41
1275 3156 2.408271 TGTTGAGCCATCTGATCCAC 57.592 50.000 0.00 0.00 0.00 4.02
1276 3157 1.065199 TGTTGAGCCATCTGATCCACC 60.065 52.381 0.00 0.00 0.00 4.61
1278 3159 1.596477 GAGCCATCTGATCCACCGC 60.596 63.158 0.00 0.00 0.00 5.68
1301 3182 6.508088 CGCATTCACTTCCTTAACTTATCGTC 60.508 42.308 0.00 0.00 0.00 4.20
1307 3188 8.963725 TCACTTCCTTAACTTATCGTCTTGATA 58.036 33.333 0.00 0.00 38.57 2.15
1357 3238 6.441274 TGAATTCATTGAAGTTTGAGAGCAC 58.559 36.000 3.38 0.00 0.00 4.40
1359 3240 2.224079 TCATTGAAGTTTGAGAGCACGC 59.776 45.455 0.00 0.00 0.00 5.34
1368 3249 1.070821 TGAGAGCACGCTCGATTTTG 58.929 50.000 13.12 0.00 46.90 2.44
1372 3253 2.349886 AGAGCACGCTCGATTTTGATTC 59.650 45.455 13.12 0.00 46.90 2.52
1373 3254 2.349886 GAGCACGCTCGATTTTGATTCT 59.650 45.455 2.78 0.00 33.06 2.40
1374 3255 2.094894 AGCACGCTCGATTTTGATTCTG 59.905 45.455 0.00 0.00 0.00 3.02
1376 3257 3.667960 GCACGCTCGATTTTGATTCTGTT 60.668 43.478 0.00 0.00 0.00 3.16
1378 3259 4.551126 CACGCTCGATTTTGATTCTGTTTC 59.449 41.667 0.00 0.00 0.00 2.78
1379 3260 4.091424 CGCTCGATTTTGATTCTGTTTCC 58.909 43.478 0.00 0.00 0.00 3.13
1380 3261 4.415735 GCTCGATTTTGATTCTGTTTCCC 58.584 43.478 0.00 0.00 0.00 3.97
1381 3262 4.082787 GCTCGATTTTGATTCTGTTTCCCA 60.083 41.667 0.00 0.00 0.00 4.37
1382 3263 5.564651 GCTCGATTTTGATTCTGTTTCCCAA 60.565 40.000 0.00 0.00 0.00 4.12
1383 3264 6.588719 TCGATTTTGATTCTGTTTCCCAAT 57.411 33.333 0.00 0.00 0.00 3.16
1384 3265 6.389091 TCGATTTTGATTCTGTTTCCCAATG 58.611 36.000 0.00 0.00 0.00 2.82
1385 3266 5.577945 CGATTTTGATTCTGTTTCCCAATGG 59.422 40.000 0.00 0.00 0.00 3.16
1387 3268 5.885449 TTTGATTCTGTTTCCCAATGGTT 57.115 34.783 0.00 0.00 0.00 3.67
1390 3271 5.389520 TGATTCTGTTTCCCAATGGTTGTA 58.610 37.500 0.00 0.00 0.00 2.41
1391 3272 5.835819 TGATTCTGTTTCCCAATGGTTGTAA 59.164 36.000 0.00 0.00 0.00 2.41
1398 3279 4.584638 TCCCAATGGTTGTAATGTAGCT 57.415 40.909 0.00 0.00 0.00 3.32
1401 3282 4.704540 CCCAATGGTTGTAATGTAGCTCAA 59.295 41.667 0.00 0.00 0.00 3.02
1410 3291 4.695455 TGTAATGTAGCTCAAGAGTTTGGC 59.305 41.667 0.00 0.00 34.97 4.52
1440 3321 1.779061 TTGGACCCTCCCTGCTGAAC 61.779 60.000 0.00 0.00 35.03 3.18
1441 3322 2.224159 GGACCCTCCCTGCTGAACA 61.224 63.158 0.00 0.00 0.00 3.18
1445 3326 0.984230 CCCTCCCTGCTGAACAACTA 59.016 55.000 0.00 0.00 0.00 2.24
1446 3327 1.339151 CCCTCCCTGCTGAACAACTAC 60.339 57.143 0.00 0.00 0.00 2.73
1551 3432 6.970484 TCAGTTTAAGCTTCTGAACAATTCC 58.030 36.000 12.57 0.00 35.65 3.01
1593 3474 2.033141 GAGCAACTCAGGCCAGCA 59.967 61.111 5.01 0.00 0.00 4.41
1613 3494 3.612479 GCAATTTGCAACAAGACCGAGAT 60.612 43.478 16.35 0.00 44.26 2.75
1624 3505 0.383949 GACCGAGATCTCAGGTCAGC 59.616 60.000 35.91 22.98 44.67 4.26
1643 3524 2.722936 CGACTCGCTCTACACTAGTG 57.277 55.000 21.44 21.44 0.00 2.74
1644 3525 2.001159 CGACTCGCTCTACACTAGTGT 58.999 52.381 30.13 30.13 46.87 3.55
1648 3529 3.819337 ACTCGCTCTACACTAGTGTGAAA 59.181 43.478 33.77 19.23 46.55 2.69
1650 3531 5.190992 TCGCTCTACACTAGTGTGAAAAA 57.809 39.130 33.77 15.83 46.55 1.94
1651 3532 4.980434 TCGCTCTACACTAGTGTGAAAAAC 59.020 41.667 33.77 18.41 46.55 2.43
1652 3533 4.143597 CGCTCTACACTAGTGTGAAAAACG 60.144 45.833 33.77 24.36 46.55 3.60
1653 3534 4.743644 GCTCTACACTAGTGTGAAAAACGT 59.256 41.667 33.77 10.08 46.55 3.99
1654 3535 5.233689 GCTCTACACTAGTGTGAAAAACGTT 59.766 40.000 33.77 9.37 46.55 3.99
1655 3536 6.561717 GCTCTACACTAGTGTGAAAAACGTTC 60.562 42.308 33.77 11.02 46.55 3.95
1656 3537 6.567050 TCTACACTAGTGTGAAAAACGTTCT 58.433 36.000 33.77 8.68 46.55 3.01
1657 3538 7.037438 TCTACACTAGTGTGAAAAACGTTCTT 58.963 34.615 33.77 8.26 46.55 2.52
1658 3539 8.190122 TCTACACTAGTGTGAAAAACGTTCTTA 58.810 33.333 33.77 11.29 46.55 2.10
1659 3540 7.781548 ACACTAGTGTGAAAAACGTTCTTAT 57.218 32.000 27.41 0.00 46.55 1.73
1660 3541 8.876275 ACACTAGTGTGAAAAACGTTCTTATA 57.124 30.769 27.41 0.00 46.55 0.98
1661 3542 9.485206 ACACTAGTGTGAAAAACGTTCTTATAT 57.515 29.630 27.41 0.00 46.55 0.86
1666 3547 8.073768 AGTGTGAAAAACGTTCTTATATTGTGG 58.926 33.333 0.00 0.00 0.00 4.17
1667 3548 7.325097 GTGTGAAAAACGTTCTTATATTGTGGG 59.675 37.037 0.00 0.00 0.00 4.61
1668 3549 7.228906 TGTGAAAAACGTTCTTATATTGTGGGA 59.771 33.333 0.00 0.00 0.00 4.37
1669 3550 7.536281 GTGAAAAACGTTCTTATATTGTGGGAC 59.464 37.037 0.00 0.00 0.00 4.46
1670 3551 5.789710 AAACGTTCTTATATTGTGGGACG 57.210 39.130 0.00 0.00 0.00 4.79
1671 3552 3.788937 ACGTTCTTATATTGTGGGACGG 58.211 45.455 0.00 0.00 0.00 4.79
1672 3553 3.448301 ACGTTCTTATATTGTGGGACGGA 59.552 43.478 0.00 0.00 0.00 4.69
1673 3554 4.049186 CGTTCTTATATTGTGGGACGGAG 58.951 47.826 0.00 0.00 0.00 4.63
1674 3555 4.377897 GTTCTTATATTGTGGGACGGAGG 58.622 47.826 0.00 0.00 0.00 4.30
1675 3556 2.969950 TCTTATATTGTGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
1687 3568 2.299297 GGACGGAGGGTATTATGGACTG 59.701 54.545 0.00 0.00 0.00 3.51
1715 3607 8.139989 ACTTACTGTCTACGTACAAGTCAAATT 58.860 33.333 0.00 0.00 0.00 1.82
1775 3670 1.021920 GCAAGGCCCTCTTCTTCGTC 61.022 60.000 0.00 0.00 32.41 4.20
1910 3805 6.327626 AGGTATATTTGAGTGACCAGCATACT 59.672 38.462 0.00 0.00 32.28 2.12
1911 3806 7.509318 AGGTATATTTGAGTGACCAGCATACTA 59.491 37.037 0.00 0.00 32.28 1.82
1917 3812 2.505407 AGTGACCAGCATACTATTGCCA 59.495 45.455 0.00 0.00 43.83 4.92
1929 3824 6.480285 CATACTATTGCCATTTTTGCTTTGC 58.520 36.000 0.00 0.00 0.00 3.68
1946 3886 4.431809 CTTTGCACAACACCAGATTTTCA 58.568 39.130 0.00 0.00 0.00 2.69
1967 4004 6.519679 TCAGAGAGCCGTTTGTTTACTATA 57.480 37.500 0.00 0.00 0.00 1.31
1969 4006 6.978659 TCAGAGAGCCGTTTGTTTACTATATG 59.021 38.462 0.00 0.00 0.00 1.78
1974 4011 7.653713 AGAGCCGTTTGTTTACTATATGATCTG 59.346 37.037 0.00 0.00 0.00 2.90
1996 4033 5.692928 TGACTAGTAGGGTGATCTCTAACC 58.307 45.833 0.00 0.00 35.59 2.85
1997 4034 5.432390 TGACTAGTAGGGTGATCTCTAACCT 59.568 44.000 0.00 0.00 36.64 3.50
1998 4035 5.944135 ACTAGTAGGGTGATCTCTAACCTC 58.056 45.833 1.45 0.00 36.64 3.85
2010 4051 6.613271 TGATCTCTAACCTCTTAGAAGGCAAT 59.387 38.462 0.00 0.00 38.32 3.56
2012 4053 7.973048 TCTCTAACCTCTTAGAAGGCAATAA 57.027 36.000 0.00 0.00 38.32 1.40
2029 4070 6.095377 GGCAATAATTGACTTTGACCTTCAG 58.905 40.000 0.00 0.00 35.19 3.02
2031 4072 7.370383 GCAATAATTGACTTTGACCTTCAGAA 58.630 34.615 0.00 0.00 0.00 3.02
2116 4158 5.020132 CCGGGATGATCTCTAACCTCTTAT 58.980 45.833 0.00 0.00 0.00 1.73
2145 4560 9.317827 GGTAAGGGTTGACTATGACCTATATTA 57.682 37.037 0.00 0.00 36.18 0.98
2224 4897 6.688578 TCACCATCAGTTAGAAGTAGTCAAC 58.311 40.000 0.00 0.00 0.00 3.18
2242 4915 4.452114 GTCAACTGGGCCAATTGATTTTTC 59.548 41.667 30.45 15.35 34.98 2.29
2313 4987 4.034742 GGCATAAACACAATAGGGTACACG 59.965 45.833 0.00 0.00 0.00 4.49
2318 4992 3.788937 ACACAATAGGGTACACGTATGC 58.211 45.455 0.00 0.00 30.97 3.14
2320 4994 4.049186 CACAATAGGGTACACGTATGCTC 58.951 47.826 0.00 0.00 30.97 4.26
2322 4996 2.330440 TAGGGTACACGTATGCTCGA 57.670 50.000 0.00 0.00 34.70 4.04
2440 5115 9.725019 TCAGAGTTAAATGTGACACAATTATCT 57.275 29.630 19.84 19.84 30.41 1.98
2441 5116 9.979270 CAGAGTTAAATGTGACACAATTATCTC 57.021 33.333 28.20 28.20 38.90 2.75
2442 5117 8.873830 AGAGTTAAATGTGACACAATTATCTCG 58.126 33.333 28.49 0.00 41.08 4.04
2443 5118 8.771920 AGTTAAATGTGACACAATTATCTCGA 57.228 30.769 13.23 0.00 24.26 4.04
2444 5119 9.214957 AGTTAAATGTGACACAATTATCTCGAA 57.785 29.630 13.23 0.00 24.26 3.71
2445 5120 9.820229 GTTAAATGTGACACAATTATCTCGAAA 57.180 29.630 13.23 0.00 0.00 3.46
2705 5380 8.634335 TTGGAAGAATGTGAAGATTTATGACA 57.366 30.769 0.00 0.00 0.00 3.58
2786 5462 5.638783 ACGATCTAAGTCTAGGAAAACACG 58.361 41.667 0.00 0.00 0.00 4.49
2791 5467 6.910995 TCTAAGTCTAGGAAAACACGAGAAG 58.089 40.000 0.00 0.00 0.00 2.85
2839 5515 8.265165 AGGAAAATCGGAAGTATTGTAGAAAC 57.735 34.615 0.00 0.00 0.00 2.78
2841 5517 8.175716 GGAAAATCGGAAGTATTGTAGAAACAG 58.824 37.037 0.00 0.00 36.83 3.16
2855 5531 6.521162 TGTAGAAACAGTCAGAAATACTGCA 58.479 36.000 3.24 0.00 46.73 4.41
3150 5827 9.541143 CCAAATATATCCAATTTTAAAAGCCGT 57.459 29.630 6.79 0.00 0.00 5.68
3182 5861 8.991243 AGTTTGTTGGGTTTTAGAGTTTTAAC 57.009 30.769 0.00 0.00 0.00 2.01
3183 5862 7.756272 AGTTTGTTGGGTTTTAGAGTTTTAACG 59.244 33.333 0.00 0.00 0.00 3.18
3228 5907 3.947834 GTCAAGGGATCGAAAATGGACAT 59.052 43.478 0.00 0.00 0.00 3.06
3231 5910 3.968265 AGGGATCGAAAATGGACATTGT 58.032 40.909 0.00 0.00 0.00 2.71
3241 5920 6.470235 CGAAAATGGACATTGTAGCTTGAATC 59.530 38.462 0.00 0.00 0.00 2.52
3242 5921 7.472334 AAAATGGACATTGTAGCTTGAATCT 57.528 32.000 0.00 0.00 0.00 2.40
3244 5923 7.798596 AATGGACATTGTAGCTTGAATCTAG 57.201 36.000 0.00 0.00 0.00 2.43
3246 5925 6.108687 TGGACATTGTAGCTTGAATCTAGTG 58.891 40.000 0.00 0.00 0.00 2.74
3251 5930 2.015736 AGCTTGAATCTAGTGCCACG 57.984 50.000 0.00 0.00 0.00 4.94
3254 5933 0.323302 TTGAATCTAGTGCCACGCCA 59.677 50.000 0.00 0.00 0.00 5.69
3265 5944 2.753966 CCACGCCACAGCATGCTAC 61.754 63.158 22.19 9.42 42.53 3.58
3267 5946 2.034879 ACGCCACAGCATGCTACAC 61.035 57.895 22.19 9.41 42.53 2.90
3391 6070 4.798387 GGTACATCCACAAAATTCGATTGC 59.202 41.667 0.00 0.00 35.97 3.56
3392 6071 4.517952 ACATCCACAAAATTCGATTGCA 57.482 36.364 0.00 0.00 0.00 4.08
3428 6107 3.201266 GGTTGTATGGAAGGATACACCCA 59.799 47.826 0.00 0.00 39.82 4.51
3476 6157 7.333423 GTGTACCTTGATTAACTGTTGCTATCA 59.667 37.037 2.69 6.95 0.00 2.15
3477 6158 8.046708 TGTACCTTGATTAACTGTTGCTATCAT 58.953 33.333 2.69 0.00 0.00 2.45
3478 6159 7.944729 ACCTTGATTAACTGTTGCTATCATT 57.055 32.000 2.69 0.00 0.00 2.57
3479 6160 8.353423 ACCTTGATTAACTGTTGCTATCATTT 57.647 30.769 2.69 0.00 0.00 2.32
3480 6161 8.462016 ACCTTGATTAACTGTTGCTATCATTTC 58.538 33.333 2.69 0.00 0.00 2.17
3481 6162 7.917505 CCTTGATTAACTGTTGCTATCATTTCC 59.082 37.037 2.69 0.00 0.00 3.13
3482 6163 7.333528 TGATTAACTGTTGCTATCATTTCCC 57.666 36.000 2.69 0.00 0.00 3.97
3483 6164 6.321181 TGATTAACTGTTGCTATCATTTCCCC 59.679 38.462 2.69 0.00 0.00 4.81
3484 6165 2.643551 ACTGTTGCTATCATTTCCCCG 58.356 47.619 0.00 0.00 0.00 5.73
3485 6166 1.334869 CTGTTGCTATCATTTCCCCGC 59.665 52.381 0.00 0.00 0.00 6.13
3486 6167 1.340502 TGTTGCTATCATTTCCCCGCA 60.341 47.619 0.00 0.00 0.00 5.69
3487 6168 1.748493 GTTGCTATCATTTCCCCGCAA 59.252 47.619 0.00 0.00 35.30 4.85
3488 6169 2.136298 TGCTATCATTTCCCCGCAAA 57.864 45.000 0.00 0.00 0.00 3.68
3489 6170 2.451490 TGCTATCATTTCCCCGCAAAA 58.549 42.857 0.00 0.00 0.00 2.44
3490 6171 2.828520 TGCTATCATTTCCCCGCAAAAA 59.171 40.909 0.00 0.00 0.00 1.94
3586 6271 1.067295 AGGACTGCACCCTGATGAAA 58.933 50.000 2.25 0.00 31.66 2.69
3674 6360 5.580691 CCGTACTGATCAGCACTGAATTTTA 59.419 40.000 22.83 0.51 43.58 1.52
3677 6363 6.882610 ACTGATCAGCACTGAATTTTACAA 57.117 33.333 22.83 0.00 43.58 2.41
3685 6371 5.920273 AGCACTGAATTTTACAATTGAACCG 59.080 36.000 13.59 0.00 32.35 4.44
3708 6394 4.874396 GGTGTTGTGCCCTATTAGTTAGTC 59.126 45.833 0.00 0.00 0.00 2.59
3731 6427 5.472137 TCTGAATAAAAAGCGTGCCTAAACT 59.528 36.000 0.00 0.00 0.00 2.66
3732 6428 6.651643 TCTGAATAAAAAGCGTGCCTAAACTA 59.348 34.615 0.00 0.00 0.00 2.24
3733 6429 6.837992 TGAATAAAAAGCGTGCCTAAACTAG 58.162 36.000 0.00 0.00 0.00 2.57
3734 6430 6.428771 TGAATAAAAAGCGTGCCTAAACTAGT 59.571 34.615 0.00 0.00 0.00 2.57
3740 6436 2.157085 GCGTGCCTAAACTAGTGTGTTC 59.843 50.000 0.00 0.00 0.00 3.18
3743 6439 3.427863 GTGCCTAAACTAGTGTGTTCGTC 59.572 47.826 0.00 0.00 0.00 4.20
3771 6467 0.679002 CACCACAGGGGCTCATCAAG 60.679 60.000 0.00 0.00 42.05 3.02
3783 6479 4.473520 ATCAAGGGAGGCGCGGTG 62.474 66.667 8.83 0.00 0.00 4.94
3979 6675 2.516930 CCCGTGCCACCATCATCC 60.517 66.667 0.00 0.00 0.00 3.51
3981 6677 1.524621 CCGTGCCACCATCATCCTC 60.525 63.158 0.00 0.00 0.00 3.71
4007 6703 3.051581 ACTTCTACAGCCCCATCATCAT 58.948 45.455 0.00 0.00 0.00 2.45
4260 6972 1.019278 CGTTCGTCAACTGGGATGGG 61.019 60.000 0.00 0.00 0.00 4.00
4375 7088 5.859495 ACTAAGTGGAGGAGAAACTTGAAG 58.141 41.667 0.00 0.00 35.77 3.02
4378 7091 3.711704 AGTGGAGGAGAAACTTGAAGACA 59.288 43.478 0.00 0.00 0.00 3.41
4389 7102 3.074412 ACTTGAAGACAATTACAGGCGG 58.926 45.455 0.00 0.00 35.37 6.13
4407 7161 1.390123 CGGCACATGAACGTCTTAGTG 59.610 52.381 0.00 0.00 0.00 2.74
4428 7182 4.327898 GTGTCGCGGATGAAAGTAAATGTA 59.672 41.667 6.13 0.00 0.00 2.29
4429 7183 5.006358 GTGTCGCGGATGAAAGTAAATGTAT 59.994 40.000 6.13 0.00 0.00 2.29
4430 7184 5.583061 TGTCGCGGATGAAAGTAAATGTATT 59.417 36.000 6.13 0.00 0.00 1.89
4431 7185 6.757478 TGTCGCGGATGAAAGTAAATGTATTA 59.243 34.615 6.13 0.00 0.00 0.98
4433 7187 7.581600 GTCGCGGATGAAAGTAAATGTATTAAC 59.418 37.037 6.13 0.00 0.00 2.01
4434 7188 7.278203 TCGCGGATGAAAGTAAATGTATTAACA 59.722 33.333 6.13 0.00 40.69 2.41
4474 7233 5.242838 TGGATTGAAACGAGGTGCTTTTTAT 59.757 36.000 0.00 0.00 0.00 1.40
4476 7235 6.967199 GGATTGAAACGAGGTGCTTTTTATAG 59.033 38.462 0.00 0.00 0.00 1.31
4478 7237 7.499321 TTGAAACGAGGTGCTTTTTATAGAA 57.501 32.000 0.00 0.00 0.00 2.10
4480 7239 6.148811 TGAAACGAGGTGCTTTTTATAGAAGG 59.851 38.462 0.00 0.00 0.00 3.46
4481 7240 5.416271 ACGAGGTGCTTTTTATAGAAGGA 57.584 39.130 0.00 0.00 0.00 3.36
4495 7254 1.561542 AGAAGGAGGGCATCGAAACAT 59.438 47.619 0.00 0.00 0.00 2.71
4498 7257 1.103398 GGAGGGCATCGAAACATGGG 61.103 60.000 0.00 0.00 0.00 4.00
4527 7286 5.522456 CAAACTTGCTAGTGATTTTGAGCA 58.478 37.500 0.36 0.00 42.98 4.26
4531 7320 4.019792 TGCTAGTGATTTTGAGCAAGGA 57.980 40.909 0.00 0.00 41.78 3.36
4537 7326 8.028938 GCTAGTGATTTTGAGCAAGGAAATAAA 58.971 33.333 0.00 0.00 34.96 1.40
4539 7328 8.767478 AGTGATTTTGAGCAAGGAAATAAATG 57.233 30.769 0.00 0.00 0.00 2.32
4628 7422 9.713713 AGAGAAGACTTAGGATAAAACAAGAAC 57.286 33.333 0.00 0.00 0.00 3.01
4736 7534 7.785506 TCTTCTATATCTAAATAGCTAGCCCCC 59.214 40.741 12.13 0.00 30.79 5.40
4737 7535 6.993408 TCTATATCTAAATAGCTAGCCCCCA 58.007 40.000 12.13 0.00 30.79 4.96
4738 7536 7.605651 TCTATATCTAAATAGCTAGCCCCCAT 58.394 38.462 12.13 0.00 30.79 4.00
4739 7537 8.074363 TCTATATCTAAATAGCTAGCCCCCATT 58.926 37.037 12.13 3.43 30.79 3.16
4740 7538 9.381038 CTATATCTAAATAGCTAGCCCCCATTA 57.619 37.037 12.13 3.75 0.00 1.90
4741 7539 6.970165 ATCTAAATAGCTAGCCCCCATTAA 57.030 37.500 12.13 0.00 0.00 1.40
4742 7540 6.123045 TCTAAATAGCTAGCCCCCATTAAC 57.877 41.667 12.13 0.00 0.00 2.01
4743 7541 4.806952 AAATAGCTAGCCCCCATTAACA 57.193 40.909 12.13 0.00 0.00 2.41
4745 7543 5.339423 AATAGCTAGCCCCCATTAACAAT 57.661 39.130 12.13 0.00 0.00 2.71
4747 7545 3.994317 AGCTAGCCCCCATTAACAATTT 58.006 40.909 12.13 0.00 0.00 1.82
4749 7547 3.960755 GCTAGCCCCCATTAACAATTTCT 59.039 43.478 2.29 0.00 0.00 2.52
4750 7548 4.038042 GCTAGCCCCCATTAACAATTTCTC 59.962 45.833 2.29 0.00 0.00 2.87
4751 7549 4.337264 AGCCCCCATTAACAATTTCTCT 57.663 40.909 0.00 0.00 0.00 3.10
4752 7550 4.281657 AGCCCCCATTAACAATTTCTCTC 58.718 43.478 0.00 0.00 0.00 3.20
4753 7551 4.023291 GCCCCCATTAACAATTTCTCTCA 58.977 43.478 0.00 0.00 0.00 3.27
4754 7552 4.466015 GCCCCCATTAACAATTTCTCTCAA 59.534 41.667 0.00 0.00 0.00 3.02
4755 7553 5.624509 GCCCCCATTAACAATTTCTCTCAAC 60.625 44.000 0.00 0.00 0.00 3.18
4756 7554 5.480073 CCCCCATTAACAATTTCTCTCAACA 59.520 40.000 0.00 0.00 0.00 3.33
4758 7556 7.037438 CCCCATTAACAATTTCTCTCAACATG 58.963 38.462 0.00 0.00 0.00 3.21
4760 7558 7.092079 CCATTAACAATTTCTCTCAACATGCA 58.908 34.615 0.00 0.00 0.00 3.96
4762 7560 8.644619 CATTAACAATTTCTCTCAACATGCAAG 58.355 33.333 0.00 0.00 0.00 4.01
4763 7561 4.553323 ACAATTTCTCTCAACATGCAAGC 58.447 39.130 0.00 0.00 0.00 4.01
4765 7563 5.168569 CAATTTCTCTCAACATGCAAGCAT 58.831 37.500 0.86 0.86 37.08 3.79
4778 7576 2.203800 CAAGCATGCCACATCATCAC 57.796 50.000 15.66 0.00 0.00 3.06
4779 7577 1.474879 CAAGCATGCCACATCATCACA 59.525 47.619 15.66 0.00 0.00 3.58
4780 7578 1.100510 AGCATGCCACATCATCACAC 58.899 50.000 15.66 0.00 0.00 3.82
4781 7579 0.812549 GCATGCCACATCATCACACA 59.187 50.000 6.36 0.00 0.00 3.72
4782 7580 1.202817 GCATGCCACATCATCACACAA 59.797 47.619 6.36 0.00 0.00 3.33
4783 7581 2.871133 CATGCCACATCATCACACAAC 58.129 47.619 0.00 0.00 0.00 3.32
4784 7582 1.978454 TGCCACATCATCACACAACA 58.022 45.000 0.00 0.00 0.00 3.33
4785 7583 2.516906 TGCCACATCATCACACAACAT 58.483 42.857 0.00 0.00 0.00 2.71
4786 7584 2.229302 TGCCACATCATCACACAACATG 59.771 45.455 0.00 0.00 0.00 3.21
4787 7585 2.871133 CCACATCATCACACAACATGC 58.129 47.619 0.00 0.00 0.00 4.06
4788 7586 2.229302 CCACATCATCACACAACATGCA 59.771 45.455 0.00 0.00 0.00 3.96
4789 7587 3.119280 CCACATCATCACACAACATGCAT 60.119 43.478 0.00 0.00 0.00 3.96
4790 7588 3.857093 CACATCATCACACAACATGCATG 59.143 43.478 25.09 25.09 0.00 4.06
4791 7589 3.759618 ACATCATCACACAACATGCATGA 59.240 39.130 32.75 10.20 36.06 3.07
4792 7590 4.142469 ACATCATCACACAACATGCATGAG 60.142 41.667 32.75 24.30 35.42 2.90
4793 7591 3.677190 TCATCACACAACATGCATGAGA 58.323 40.909 32.75 18.25 30.70 3.27
4794 7592 4.073549 TCATCACACAACATGCATGAGAA 58.926 39.130 32.75 10.74 30.70 2.87
4795 7593 4.519730 TCATCACACAACATGCATGAGAAA 59.480 37.500 32.75 11.26 30.70 2.52
4796 7594 4.915158 TCACACAACATGCATGAGAAAA 57.085 36.364 32.75 8.98 0.00 2.29
4797 7595 5.456548 TCACACAACATGCATGAGAAAAT 57.543 34.783 32.75 6.55 0.00 1.82
4798 7596 5.224135 TCACACAACATGCATGAGAAAATG 58.776 37.500 32.75 20.58 0.00 2.32
4804 7602 3.746900 GCATGAGAAAATGCCCACC 57.253 52.632 0.00 0.00 45.93 4.61
4805 7603 0.176449 GCATGAGAAAATGCCCACCC 59.824 55.000 0.00 0.00 45.93 4.61
4806 7604 0.826062 CATGAGAAAATGCCCACCCC 59.174 55.000 0.00 0.00 0.00 4.95
4807 7605 0.325577 ATGAGAAAATGCCCACCCCC 60.326 55.000 0.00 0.00 0.00 5.40
4808 7606 1.078347 GAGAAAATGCCCACCCCCA 59.922 57.895 0.00 0.00 0.00 4.96
4809 7607 1.229177 AGAAAATGCCCACCCCCAC 60.229 57.895 0.00 0.00 0.00 4.61
4810 7608 1.229177 GAAAATGCCCACCCCCACT 60.229 57.895 0.00 0.00 0.00 4.00
4811 7609 0.040499 GAAAATGCCCACCCCCACTA 59.960 55.000 0.00 0.00 0.00 2.74
4812 7610 0.715987 AAAATGCCCACCCCCACTAT 59.284 50.000 0.00 0.00 0.00 2.12
4813 7611 0.261696 AAATGCCCACCCCCACTATC 59.738 55.000 0.00 0.00 0.00 2.08
4814 7612 0.923729 AATGCCCACCCCCACTATCA 60.924 55.000 0.00 0.00 0.00 2.15
4815 7613 0.702356 ATGCCCACCCCCACTATCAT 60.702 55.000 0.00 0.00 0.00 2.45
4816 7614 0.029577 TGCCCACCCCCACTATCATA 60.030 55.000 0.00 0.00 0.00 2.15
4817 7615 1.145571 GCCCACCCCCACTATCATAA 58.854 55.000 0.00 0.00 0.00 1.90
4818 7616 1.073923 GCCCACCCCCACTATCATAAG 59.926 57.143 0.00 0.00 0.00 1.73
4819 7617 2.418669 CCCACCCCCACTATCATAAGT 58.581 52.381 0.00 0.00 0.00 2.24
4820 7618 2.372172 CCCACCCCCACTATCATAAGTC 59.628 54.545 0.00 0.00 0.00 3.01
4821 7619 3.318313 CCACCCCCACTATCATAAGTCT 58.682 50.000 0.00 0.00 0.00 3.24
4822 7620 3.325135 CCACCCCCACTATCATAAGTCTC 59.675 52.174 0.00 0.00 0.00 3.36
4823 7621 4.227197 CACCCCCACTATCATAAGTCTCT 58.773 47.826 0.00 0.00 0.00 3.10
4824 7622 4.656112 CACCCCCACTATCATAAGTCTCTT 59.344 45.833 0.00 0.00 0.00 2.85
4825 7623 5.839063 CACCCCCACTATCATAAGTCTCTTA 59.161 44.000 0.00 0.00 0.00 2.10
4826 7624 6.326583 CACCCCCACTATCATAAGTCTCTTAA 59.673 42.308 0.00 0.00 0.00 1.85
4827 7625 6.326843 ACCCCCACTATCATAAGTCTCTTAAC 59.673 42.308 0.00 0.00 0.00 2.01
4828 7626 6.326583 CCCCCACTATCATAAGTCTCTTAACA 59.673 42.308 0.00 0.00 0.00 2.41
4829 7627 7.016661 CCCCCACTATCATAAGTCTCTTAACAT 59.983 40.741 0.00 0.00 0.00 2.71
4830 7628 7.875041 CCCCACTATCATAAGTCTCTTAACATG 59.125 40.741 0.00 0.00 0.00 3.21
4831 7629 7.386299 CCCACTATCATAAGTCTCTTAACATGC 59.614 40.741 0.00 0.00 0.00 4.06
4832 7630 7.928167 CCACTATCATAAGTCTCTTAACATGCA 59.072 37.037 0.00 0.00 0.00 3.96
4833 7631 9.317936 CACTATCATAAGTCTCTTAACATGCAA 57.682 33.333 0.00 0.00 0.00 4.08
4834 7632 9.539825 ACTATCATAAGTCTCTTAACATGCAAG 57.460 33.333 0.00 0.00 0.00 4.01
4835 7633 6.668541 TCATAAGTCTCTTAACATGCAAGC 57.331 37.500 0.00 0.00 0.00 4.01
4836 7634 6.172630 TCATAAGTCTCTTAACATGCAAGCA 58.827 36.000 0.00 0.00 0.00 3.91
4837 7635 6.825213 TCATAAGTCTCTTAACATGCAAGCAT 59.175 34.615 0.86 0.86 37.08 3.79
4877 7675 8.579682 AAAAAGACTTATCTCAACATGCAAAC 57.420 30.769 0.00 0.00 32.34 2.93
4878 7676 6.882610 AAGACTTATCTCAACATGCAAACA 57.117 33.333 0.00 0.00 32.34 2.83
4879 7677 7.458409 AAGACTTATCTCAACATGCAAACAT 57.542 32.000 0.00 0.00 32.61 2.71
4880 7678 8.565896 AAGACTTATCTCAACATGCAAACATA 57.434 30.769 0.00 0.00 31.15 2.29
4881 7679 7.978982 AGACTTATCTCAACATGCAAACATAC 58.021 34.615 0.00 0.00 33.67 2.39
4882 7680 7.607607 AGACTTATCTCAACATGCAAACATACA 59.392 33.333 0.00 0.00 33.67 2.29
4883 7681 8.284945 ACTTATCTCAACATGCAAACATACAT 57.715 30.769 0.00 0.00 33.67 2.29
4884 7682 9.394767 ACTTATCTCAACATGCAAACATACATA 57.605 29.630 0.00 0.00 33.67 2.29
4887 7685 7.920160 TCTCAACATGCAAACATACATAAGA 57.080 32.000 0.00 0.00 33.67 2.10
4888 7686 8.334263 TCTCAACATGCAAACATACATAAGAA 57.666 30.769 0.00 0.00 33.67 2.52
4889 7687 8.959548 TCTCAACATGCAAACATACATAAGAAT 58.040 29.630 0.00 0.00 33.67 2.40
4890 7688 9.577110 CTCAACATGCAAACATACATAAGAATT 57.423 29.630 0.00 0.00 33.67 2.17
4891 7689 9.926158 TCAACATGCAAACATACATAAGAATTT 57.074 25.926 0.00 0.00 33.67 1.82
5023 7821 9.935682 ATATTCATGTTTCATACAACGAATCAC 57.064 29.630 0.00 0.00 40.53 3.06
5024 7822 6.793492 TCATGTTTCATACAACGAATCACA 57.207 33.333 0.00 0.00 40.89 3.58
5025 7823 7.376435 TCATGTTTCATACAACGAATCACAT 57.624 32.000 0.00 0.00 40.89 3.21
5026 7824 7.815641 TCATGTTTCATACAACGAATCACATT 58.184 30.769 0.00 0.00 40.89 2.71
5027 7825 7.750014 TCATGTTTCATACAACGAATCACATTG 59.250 33.333 0.00 0.00 40.89 2.82
5028 7826 7.195839 TGTTTCATACAACGAATCACATTGA 57.804 32.000 0.00 0.00 32.64 2.57
5029 7827 7.643579 TGTTTCATACAACGAATCACATTGAA 58.356 30.769 0.00 0.00 32.64 2.69
5030 7828 8.131731 TGTTTCATACAACGAATCACATTGAAA 58.868 29.630 0.00 0.00 32.64 2.69
5031 7829 9.128107 GTTTCATACAACGAATCACATTGAAAT 57.872 29.630 0.00 0.00 34.33 2.17
5034 7832 9.934190 TCATACAACGAATCACATTGAAATATG 57.066 29.630 0.00 0.00 0.00 1.78
5035 7833 9.720667 CATACAACGAATCACATTGAAATATGT 57.279 29.630 0.00 0.00 39.27 2.29
5037 7835 8.451687 ACAACGAATCACATTGAAATATGTTG 57.548 30.769 0.00 0.00 36.64 3.33
5038 7836 8.296000 ACAACGAATCACATTGAAATATGTTGA 58.704 29.630 15.06 0.00 36.64 3.18
5039 7837 9.127006 CAACGAATCACATTGAAATATGTTGAA 57.873 29.630 0.00 0.00 36.64 2.69
5040 7838 9.689976 AACGAATCACATTGAAATATGTTGAAA 57.310 25.926 0.00 0.00 36.64 2.69
5041 7839 9.689976 ACGAATCACATTGAAATATGTTGAAAA 57.310 25.926 0.00 0.00 36.64 2.29
5051 7849 8.641499 TGAAATATGTTGAAAAATATTCCCGC 57.359 30.769 0.05 0.00 30.44 6.13
5052 7850 8.253810 TGAAATATGTTGAAAAATATTCCCGCA 58.746 29.630 0.05 0.00 30.44 5.69
5053 7851 9.092876 GAAATATGTTGAAAAATATTCCCGCAA 57.907 29.630 0.05 0.00 30.44 4.85
5054 7852 8.419076 AATATGTTGAAAAATATTCCCGCAAC 57.581 30.769 12.63 12.63 35.85 4.17
5055 7853 5.201713 TGTTGAAAAATATTCCCGCAACA 57.798 34.783 15.88 15.88 40.97 3.33
5056 7854 5.601662 TGTTGAAAAATATTCCCGCAACAA 58.398 33.333 16.81 0.00 40.49 2.83
5057 7855 5.463724 TGTTGAAAAATATTCCCGCAACAAC 59.536 36.000 16.81 0.00 40.49 3.32
5058 7856 4.230657 TGAAAAATATTCCCGCAACAACG 58.769 39.130 0.00 0.00 0.00 4.10
5059 7857 3.926821 AAAATATTCCCGCAACAACGT 57.073 38.095 0.00 0.00 0.00 3.99
5060 7858 2.911819 AATATTCCCGCAACAACGTG 57.088 45.000 0.00 0.00 0.00 4.49
5061 7859 0.450184 ATATTCCCGCAACAACGTGC 59.550 50.000 0.00 0.00 41.32 5.34
5067 7865 2.973600 GCAACAACGTGCGGGGTA 60.974 61.111 0.00 0.00 34.21 3.69
5068 7866 2.329614 GCAACAACGTGCGGGGTAT 61.330 57.895 0.00 0.00 34.21 2.73
5069 7867 1.791662 CAACAACGTGCGGGGTATC 59.208 57.895 0.00 0.00 0.00 2.24
5070 7868 0.951525 CAACAACGTGCGGGGTATCA 60.952 55.000 0.00 0.00 0.00 2.15
5071 7869 0.035820 AACAACGTGCGGGGTATCAT 60.036 50.000 0.00 0.00 0.00 2.45
5072 7870 0.461339 ACAACGTGCGGGGTATCATC 60.461 55.000 0.00 0.00 0.00 2.92
5073 7871 0.179084 CAACGTGCGGGGTATCATCT 60.179 55.000 0.00 0.00 0.00 2.90
5074 7872 1.067974 CAACGTGCGGGGTATCATCTA 59.932 52.381 0.00 0.00 0.00 1.98
5075 7873 0.959553 ACGTGCGGGGTATCATCTAG 59.040 55.000 0.00 0.00 0.00 2.43
5076 7874 0.959553 CGTGCGGGGTATCATCTAGT 59.040 55.000 0.00 0.00 0.00 2.57
5086 7884 7.368833 CGGGGTATCATCTAGTTGTACTAAAG 58.631 42.308 0.83 0.00 29.00 1.85
5090 7888 7.868415 GGTATCATCTAGTTGTACTAAAGCTGG 59.132 40.741 0.83 0.00 29.00 4.85
5097 7895 5.246307 AGTTGTACTAAAGCTGGGACAATC 58.754 41.667 13.19 8.73 38.70 2.67
5107 7905 4.660168 AGCTGGGACAATCAATATGGATC 58.340 43.478 0.00 0.00 38.70 3.36
5108 7906 3.438087 GCTGGGACAATCAATATGGATCG 59.562 47.826 0.00 0.00 38.70 3.69
5111 7909 4.289410 TGGGACAATCAATATGGATCGGAT 59.711 41.667 0.00 0.00 31.92 4.18
5115 7913 5.494724 ACAATCAATATGGATCGGATGGAG 58.505 41.667 0.00 0.00 0.00 3.86
5119 7917 5.333581 TCAATATGGATCGGATGGAGTAGT 58.666 41.667 0.00 0.00 0.00 2.73
5121 7919 6.603599 TCAATATGGATCGGATGGAGTAGTAG 59.396 42.308 0.00 0.00 0.00 2.57
5125 7923 5.394738 TGGATCGGATGGAGTAGTAGATTT 58.605 41.667 0.00 0.00 0.00 2.17
5129 7927 8.192110 GGATCGGATGGAGTAGTAGATTTTATC 58.808 40.741 0.00 0.00 0.00 1.75
5136 7934 8.749026 TGGAGTAGTAGATTTTATCGAGACTT 57.251 34.615 0.00 0.00 0.00 3.01
5183 7981 6.078664 TCCTCCCTTATGACCTCTAAATCTC 58.921 44.000 0.00 0.00 0.00 2.75
5184 7982 5.047660 CCTCCCTTATGACCTCTAAATCTCG 60.048 48.000 0.00 0.00 0.00 4.04
5185 7983 4.281182 TCCCTTATGACCTCTAAATCTCGC 59.719 45.833 0.00 0.00 0.00 5.03
5186 7984 4.039245 CCCTTATGACCTCTAAATCTCGCA 59.961 45.833 0.00 0.00 0.00 5.10
5252 8051 4.022068 TCAGGCTAAATGACTTGCAAAAGG 60.022 41.667 0.00 0.00 0.00 3.11
5254 8053 3.306294 GGCTAAATGACTTGCAAAAGGCT 60.306 43.478 0.00 0.00 45.15 4.58
5275 8075 3.852558 TTTTTGGGGGTGTGGTAGG 57.147 52.632 0.00 0.00 0.00 3.18
5291 8091 5.477984 TGTGGTAGGTAACATCGGGATATAC 59.522 44.000 0.00 0.00 41.41 1.47
5293 8093 6.015180 GTGGTAGGTAACATCGGGATATACAA 60.015 42.308 0.00 0.00 41.41 2.41
5295 8095 7.039882 GGTAGGTAACATCGGGATATACAATG 58.960 42.308 0.00 0.00 41.41 2.82
5328 8128 9.942850 AGTAAAATAATTGTTTGATTTGGGAGG 57.057 29.630 0.51 0.00 0.00 4.30
5329 8129 7.686438 AAAATAATTGTTTGATTTGGGAGGC 57.314 32.000 0.51 0.00 0.00 4.70
5330 8130 6.625532 AATAATTGTTTGATTTGGGAGGCT 57.374 33.333 0.00 0.00 0.00 4.58
5331 8131 7.732222 AATAATTGTTTGATTTGGGAGGCTA 57.268 32.000 0.00 0.00 0.00 3.93
5332 8132 5.405935 AATTGTTTGATTTGGGAGGCTAC 57.594 39.130 0.00 0.00 0.00 3.58
5333 8133 2.802719 TGTTTGATTTGGGAGGCTACC 58.197 47.619 9.51 9.51 0.00 3.18
5334 8134 2.109128 TGTTTGATTTGGGAGGCTACCA 59.891 45.455 16.50 16.50 35.88 3.25
5335 8135 3.161866 GTTTGATTTGGGAGGCTACCAA 58.838 45.455 27.56 27.56 45.73 3.67
5336 8136 3.756082 TTGATTTGGGAGGCTACCAAT 57.244 42.857 31.22 20.43 46.55 3.16
5337 8137 3.756082 TGATTTGGGAGGCTACCAATT 57.244 42.857 31.22 26.68 46.55 2.32
5338 8138 3.631250 TGATTTGGGAGGCTACCAATTC 58.369 45.455 32.55 32.55 46.55 2.17
5339 8139 3.269381 TGATTTGGGAGGCTACCAATTCT 59.731 43.478 35.68 24.01 46.55 2.40
5340 8140 2.806945 TTGGGAGGCTACCAATTCTG 57.193 50.000 27.56 0.00 42.75 3.02
5341 8141 2.291540 TTTGGGAGGCTACCAATTCTGG 60.292 50.000 31.22 0.00 46.55 3.86
5342 8142 1.213296 GGGAGGCTACCAATTCTGGA 58.787 55.000 12.07 0.00 46.92 3.86
5343 8143 1.564348 GGGAGGCTACCAATTCTGGAA 59.436 52.381 12.07 0.00 46.92 3.53
5344 8144 2.175715 GGGAGGCTACCAATTCTGGAAT 59.824 50.000 12.07 0.00 46.92 3.01
5345 8145 3.373110 GGGAGGCTACCAATTCTGGAATT 60.373 47.826 12.07 3.06 46.92 2.17
5346 8146 4.281657 GGAGGCTACCAATTCTGGAATTT 58.718 43.478 5.90 0.00 46.92 1.82
5347 8147 4.339530 GGAGGCTACCAATTCTGGAATTTC 59.660 45.833 5.90 0.95 46.92 2.17
5348 8148 5.196695 GAGGCTACCAATTCTGGAATTTCT 58.803 41.667 5.90 0.00 46.92 2.52
5349 8149 5.583932 AGGCTACCAATTCTGGAATTTCTT 58.416 37.500 5.90 0.00 46.92 2.52
5350 8150 5.654209 AGGCTACCAATTCTGGAATTTCTTC 59.346 40.000 5.90 0.00 46.92 2.87
5351 8151 5.654209 GGCTACCAATTCTGGAATTTCTTCT 59.346 40.000 5.90 0.00 46.92 2.85
5352 8152 6.183360 GGCTACCAATTCTGGAATTTCTTCTC 60.183 42.308 5.90 0.00 46.92 2.87
5353 8153 5.886960 ACCAATTCTGGAATTTCTTCTCG 57.113 39.130 5.90 0.00 46.92 4.04
5354 8154 5.560724 ACCAATTCTGGAATTTCTTCTCGA 58.439 37.500 5.90 0.00 46.92 4.04
5355 8155 5.645497 ACCAATTCTGGAATTTCTTCTCGAG 59.355 40.000 5.93 5.93 46.92 4.04
5356 8156 5.877012 CCAATTCTGGAATTTCTTCTCGAGA 59.123 40.000 12.08 12.08 46.92 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.335051 GCCACCTTTTGCTTCTTCGAC 60.335 52.381 0.00 0.00 0.00 4.20
72 73 4.822896 AGTTACAGATACTAGCCTTCTCCG 59.177 45.833 0.00 0.00 0.00 4.63
95 96 3.135167 ACCGAAAGTCCTTAAACTGACCA 59.865 43.478 0.00 0.00 31.76 4.02
119 120 6.884832 TGGACTATTTACCACTCAACCTATG 58.115 40.000 0.00 0.00 0.00 2.23
183 184 2.357517 GCCCCGATACTGATGCCG 60.358 66.667 0.00 0.00 0.00 5.69
197 198 1.208052 TGTCTGATACAGAAGCTGCCC 59.792 52.381 2.98 0.00 42.46 5.36
208 209 7.864379 CCAAAATTCCATGCTTATGTCTGATAC 59.136 37.037 0.00 0.00 0.00 2.24
275 277 0.976641 TCGGCTAATATCAGGGGCTG 59.023 55.000 0.00 0.00 0.00 4.85
308 310 5.774690 ACCAAACTTAACCATGTCATCACAT 59.225 36.000 0.00 0.00 44.72 3.21
342 344 2.293122 CGGATTCAGAAAAGGCACAACA 59.707 45.455 0.00 0.00 0.00 3.33
367 369 6.316140 AGAAAAAGGTTGCAAAAATGGAGAAC 59.684 34.615 0.00 0.00 0.00 3.01
369 371 5.988287 AGAAAAAGGTTGCAAAAATGGAGA 58.012 33.333 0.00 0.00 0.00 3.71
389 391 7.309744 GGAATTCACAACACCATGGATAAAGAA 60.310 37.037 21.47 14.62 0.00 2.52
413 415 1.272490 CAGTTTCACAGAGCCTACGGA 59.728 52.381 0.00 0.00 0.00 4.69
464 2250 4.290622 CACACAAGGGGCTGGCCT 62.291 66.667 20.47 3.26 36.10 5.19
481 2267 2.087646 GGTCAATCTCAAGGTTCAGCC 58.912 52.381 0.00 0.00 37.58 4.85
494 2280 1.293924 CAGAGGATGCGTGGTCAATC 58.706 55.000 0.00 0.00 0.00 2.67
499 2285 4.101448 GCCCAGAGGATGCGTGGT 62.101 66.667 7.68 0.00 33.47 4.16
501 2287 0.882042 GTATGCCCAGAGGATGCGTG 60.882 60.000 0.00 0.00 33.47 5.34
504 2290 0.250640 CCTGTATGCCCAGAGGATGC 60.251 60.000 0.00 0.00 34.23 3.91
505 2291 0.250640 GCCTGTATGCCCAGAGGATG 60.251 60.000 2.33 0.00 34.23 3.51
506 2292 0.695462 TGCCTGTATGCCCAGAGGAT 60.695 55.000 2.33 0.00 34.23 3.24
507 2293 1.306911 TGCCTGTATGCCCAGAGGA 60.307 57.895 2.33 0.00 34.23 3.71
508 2294 1.147824 CTGCCTGTATGCCCAGAGG 59.852 63.158 0.00 0.00 34.23 3.69
509 2295 1.525535 GCTGCCTGTATGCCCAGAG 60.526 63.158 0.00 0.00 34.23 3.35
510 2296 2.591753 GCTGCCTGTATGCCCAGA 59.408 61.111 0.00 0.00 34.23 3.86
511 2297 2.898840 CGCTGCCTGTATGCCCAG 60.899 66.667 0.00 0.00 0.00 4.45
512 2298 1.904990 TAACGCTGCCTGTATGCCCA 61.905 55.000 0.00 0.00 0.00 5.36
513 2299 1.153249 TAACGCTGCCTGTATGCCC 60.153 57.895 0.00 0.00 0.00 5.36
514 2300 0.179084 TCTAACGCTGCCTGTATGCC 60.179 55.000 0.00 0.00 0.00 4.40
515 2301 0.931005 GTCTAACGCTGCCTGTATGC 59.069 55.000 0.00 0.00 0.00 3.14
516 2302 2.196749 CTGTCTAACGCTGCCTGTATG 58.803 52.381 0.00 0.00 0.00 2.39
517 2303 1.137086 CCTGTCTAACGCTGCCTGTAT 59.863 52.381 0.00 0.00 0.00 2.29
518 2304 0.530744 CCTGTCTAACGCTGCCTGTA 59.469 55.000 0.00 0.00 0.00 2.74
519 2305 1.293498 CCTGTCTAACGCTGCCTGT 59.707 57.895 0.00 0.00 0.00 4.00
520 2306 1.448540 CCCTGTCTAACGCTGCCTG 60.449 63.158 0.00 0.00 0.00 4.85
521 2307 1.913762 ACCCTGTCTAACGCTGCCT 60.914 57.895 0.00 0.00 0.00 4.75
522 2308 1.741770 CACCCTGTCTAACGCTGCC 60.742 63.158 0.00 0.00 0.00 4.85
523 2309 1.014564 GTCACCCTGTCTAACGCTGC 61.015 60.000 0.00 0.00 0.00 5.25
547 2333 7.442666 CCTACTTCTTTAAGACAAGCTTCACTT 59.557 37.037 15.74 15.74 38.05 3.16
566 2352 2.991250 TGGCAGAGCAATTCCTACTTC 58.009 47.619 0.00 0.00 0.00 3.01
587 2378 2.289072 CGTTGTGGGACTGAGTGAGATT 60.289 50.000 0.00 0.00 0.00 2.40
600 2391 1.468520 CAGTAATCTTGGCGTTGTGGG 59.531 52.381 0.00 0.00 0.00 4.61
606 2397 0.981183 TCACCCAGTAATCTTGGCGT 59.019 50.000 0.00 0.00 30.52 5.68
608 2399 1.004277 TGGTCACCCAGTAATCTTGGC 59.996 52.381 0.00 0.00 35.17 4.52
642 2433 3.489785 AGTTTTAGTTGAGACTTCGCGTG 59.510 43.478 5.77 2.81 37.33 5.34
644 2435 3.734231 TCAGTTTTAGTTGAGACTTCGCG 59.266 43.478 0.00 0.00 37.33 5.87
695 2486 0.178967 TGCCAACTTGATTGCCCAGA 60.179 50.000 0.00 0.00 36.93 3.86
764 2564 5.534654 CAGGTCTCAGGGATTAAGAGTAGAG 59.465 48.000 0.00 0.00 0.00 2.43
780 2580 1.915266 CCTCCACTGGCAGGTCTCA 60.915 63.158 20.34 0.00 0.00 3.27
804 2604 7.489113 ACTTCAAAAGACATTTAAGTGCACTTG 59.511 33.333 36.50 25.07 37.40 3.16
815 2615 8.177119 TGGTAGCATTACTTCAAAAGACATTT 57.823 30.769 0.00 0.00 0.00 2.32
818 2618 7.759489 ATTGGTAGCATTACTTCAAAAGACA 57.241 32.000 0.00 0.00 0.00 3.41
819 2619 8.082242 ACAATTGGTAGCATTACTTCAAAAGAC 58.918 33.333 10.83 0.00 0.00 3.01
820 2620 8.177119 ACAATTGGTAGCATTACTTCAAAAGA 57.823 30.769 10.83 0.00 0.00 2.52
821 2621 8.816640 AACAATTGGTAGCATTACTTCAAAAG 57.183 30.769 10.83 0.00 0.00 2.27
852 2663 2.360852 AGCTTGCTTCCAGCGCAT 60.361 55.556 11.47 0.00 46.26 4.73
853 2664 3.359523 CAGCTTGCTTCCAGCGCA 61.360 61.111 11.47 0.00 46.26 6.09
897 2770 2.746904 GCCAGAAGAAGAAGAAGGAAGC 59.253 50.000 0.00 0.00 0.00 3.86
898 2771 4.013267 TGCCAGAAGAAGAAGAAGGAAG 57.987 45.455 0.00 0.00 0.00 3.46
899 2772 4.647564 ATGCCAGAAGAAGAAGAAGGAA 57.352 40.909 0.00 0.00 0.00 3.36
900 2773 4.383552 GCTATGCCAGAAGAAGAAGAAGGA 60.384 45.833 0.00 0.00 0.00 3.36
901 2774 3.876320 GCTATGCCAGAAGAAGAAGAAGG 59.124 47.826 0.00 0.00 0.00 3.46
902 2775 4.511527 TGCTATGCCAGAAGAAGAAGAAG 58.488 43.478 0.00 0.00 0.00 2.85
903 2776 4.511527 CTGCTATGCCAGAAGAAGAAGAA 58.488 43.478 0.00 0.00 30.10 2.52
904 2777 3.681034 GCTGCTATGCCAGAAGAAGAAGA 60.681 47.826 0.00 0.00 30.10 2.87
905 2778 2.613133 GCTGCTATGCCAGAAGAAGAAG 59.387 50.000 0.00 0.00 30.10 2.85
906 2779 2.238144 AGCTGCTATGCCAGAAGAAGAA 59.762 45.455 0.00 0.00 30.10 2.52
979 2860 0.531753 GTGGCTAGGCTAGAGCTTGC 60.532 60.000 25.37 9.12 39.98 4.01
1145 3026 0.034089 CCAGGAAGGAAAAGGCGGAT 60.034 55.000 0.00 0.00 41.22 4.18
1146 3027 1.378762 CCAGGAAGGAAAAGGCGGA 59.621 57.895 0.00 0.00 41.22 5.54
1275 3156 5.276868 CGATAAGTTAAGGAAGTGAATGCGG 60.277 44.000 0.00 0.00 0.00 5.69
1276 3157 5.291128 ACGATAAGTTAAGGAAGTGAATGCG 59.709 40.000 0.00 0.00 0.00 4.73
1278 3159 8.383619 CAAGACGATAAGTTAAGGAAGTGAATG 58.616 37.037 0.00 0.00 0.00 2.67
1301 3182 8.571461 GCTTTAAGAGCCAAATCATTATCAAG 57.429 34.615 0.00 0.00 46.01 3.02
1353 3234 2.094894 CAGAATCAAAATCGAGCGTGCT 59.905 45.455 0.00 0.00 0.00 4.40
1357 3238 4.091424 GGAAACAGAATCAAAATCGAGCG 58.909 43.478 0.00 0.00 0.00 5.03
1359 3240 5.627499 TGGGAAACAGAATCAAAATCGAG 57.373 39.130 0.00 0.00 0.00 4.04
1368 3249 4.871933 ACAACCATTGGGAAACAGAATC 57.128 40.909 7.78 0.00 38.05 2.52
1372 3253 5.467035 ACATTACAACCATTGGGAAACAG 57.533 39.130 7.78 0.00 38.05 3.16
1373 3254 5.047660 GCTACATTACAACCATTGGGAAACA 60.048 40.000 7.78 0.00 38.05 2.83
1374 3255 5.185056 AGCTACATTACAACCATTGGGAAAC 59.815 40.000 7.78 0.00 38.05 2.78
1376 3257 4.929479 AGCTACATTACAACCATTGGGAA 58.071 39.130 7.78 0.00 38.05 3.97
1378 3259 4.269183 TGAGCTACATTACAACCATTGGG 58.731 43.478 7.78 0.00 41.29 4.12
1379 3260 5.647658 TCTTGAGCTACATTACAACCATTGG 59.352 40.000 0.00 0.00 34.12 3.16
1380 3261 6.372659 ACTCTTGAGCTACATTACAACCATTG 59.627 38.462 0.00 0.00 0.00 2.82
1381 3262 6.476378 ACTCTTGAGCTACATTACAACCATT 58.524 36.000 0.00 0.00 0.00 3.16
1382 3263 6.054860 ACTCTTGAGCTACATTACAACCAT 57.945 37.500 0.00 0.00 0.00 3.55
1383 3264 5.483685 ACTCTTGAGCTACATTACAACCA 57.516 39.130 0.00 0.00 0.00 3.67
1384 3265 6.348540 CCAAACTCTTGAGCTACATTACAACC 60.349 42.308 0.00 0.00 34.14 3.77
1385 3266 6.603095 CCAAACTCTTGAGCTACATTACAAC 58.397 40.000 0.00 0.00 34.14 3.32
1387 3268 4.695455 GCCAAACTCTTGAGCTACATTACA 59.305 41.667 0.00 0.00 34.14 2.41
1390 3271 3.084786 GGCCAAACTCTTGAGCTACATT 58.915 45.455 0.00 0.00 34.14 2.71
1391 3272 2.307098 AGGCCAAACTCTTGAGCTACAT 59.693 45.455 5.01 0.00 34.14 2.29
1398 3279 1.767692 GGGGAGGCCAAACTCTTGA 59.232 57.895 5.01 0.00 37.63 3.02
1401 3282 1.466186 AAGGGGGAGGCCAAACTCT 60.466 57.895 5.01 0.00 37.63 3.24
1410 3291 2.309504 GGGTCCAAGAAGGGGGAGG 61.310 68.421 0.00 0.00 38.24 4.30
1440 3321 1.068474 CTTTGGAGGCGTCGTAGTTG 58.932 55.000 0.00 0.00 0.00 3.16
1441 3322 0.037605 CCTTTGGAGGCGTCGTAGTT 60.038 55.000 0.00 0.00 35.94 2.24
1593 3474 4.074970 AGATCTCGGTCTTGTTGCAAATT 58.925 39.130 0.00 0.00 0.00 1.82
1613 3494 3.579685 CGAGTCGCTGACCTGAGA 58.420 61.111 0.00 0.00 32.18 3.27
1624 3505 2.001159 ACACTAGTGTAGAGCGAGTCG 58.999 52.381 26.91 8.54 42.90 4.18
1635 3516 7.781548 ATAAGAACGTTTTTCACACTAGTGT 57.218 32.000 22.95 22.95 46.01 3.55
1640 3521 8.073768 CCACAATATAAGAACGTTTTTCACACT 58.926 33.333 7.42 0.00 0.00 3.55
1641 3522 7.325097 CCCACAATATAAGAACGTTTTTCACAC 59.675 37.037 7.42 0.00 0.00 3.82
1642 3523 7.228906 TCCCACAATATAAGAACGTTTTTCACA 59.771 33.333 7.42 0.00 0.00 3.58
1643 3524 7.536281 GTCCCACAATATAAGAACGTTTTTCAC 59.464 37.037 7.42 0.00 0.00 3.18
1644 3525 7.571613 CGTCCCACAATATAAGAACGTTTTTCA 60.572 37.037 7.42 0.00 0.00 2.69
1645 3526 6.739550 CGTCCCACAATATAAGAACGTTTTTC 59.260 38.462 7.42 0.00 0.00 2.29
1648 3529 4.632688 CCGTCCCACAATATAAGAACGTTT 59.367 41.667 0.46 0.00 0.00 3.60
1650 3531 3.448301 TCCGTCCCACAATATAAGAACGT 59.552 43.478 0.00 0.00 0.00 3.99
1651 3532 4.049186 CTCCGTCCCACAATATAAGAACG 58.951 47.826 0.00 0.00 0.00 3.95
1652 3533 4.377897 CCTCCGTCCCACAATATAAGAAC 58.622 47.826 0.00 0.00 0.00 3.01
1653 3534 3.389983 CCCTCCGTCCCACAATATAAGAA 59.610 47.826 0.00 0.00 0.00 2.52
1654 3535 2.969950 CCCTCCGTCCCACAATATAAGA 59.030 50.000 0.00 0.00 0.00 2.10
1655 3536 2.704065 ACCCTCCGTCCCACAATATAAG 59.296 50.000 0.00 0.00 0.00 1.73
1656 3537 2.766736 ACCCTCCGTCCCACAATATAA 58.233 47.619 0.00 0.00 0.00 0.98
1657 3538 2.482414 ACCCTCCGTCCCACAATATA 57.518 50.000 0.00 0.00 0.00 0.86
1658 3539 2.482414 TACCCTCCGTCCCACAATAT 57.518 50.000 0.00 0.00 0.00 1.28
1659 3540 2.482414 ATACCCTCCGTCCCACAATA 57.518 50.000 0.00 0.00 0.00 1.90
1660 3541 1.591768 AATACCCTCCGTCCCACAAT 58.408 50.000 0.00 0.00 0.00 2.71
1661 3542 2.250921 TAATACCCTCCGTCCCACAA 57.749 50.000 0.00 0.00 0.00 3.33
1662 3543 2.043992 CATAATACCCTCCGTCCCACA 58.956 52.381 0.00 0.00 0.00 4.17
1663 3544 1.346722 CCATAATACCCTCCGTCCCAC 59.653 57.143 0.00 0.00 0.00 4.61
1664 3545 1.221007 TCCATAATACCCTCCGTCCCA 59.779 52.381 0.00 0.00 0.00 4.37
1665 3546 1.622312 GTCCATAATACCCTCCGTCCC 59.378 57.143 0.00 0.00 0.00 4.46
1666 3547 2.299297 CAGTCCATAATACCCTCCGTCC 59.701 54.545 0.00 0.00 0.00 4.79
1667 3548 2.963782 ACAGTCCATAATACCCTCCGTC 59.036 50.000 0.00 0.00 0.00 4.79
1668 3549 3.042059 ACAGTCCATAATACCCTCCGT 57.958 47.619 0.00 0.00 0.00 4.69
1669 3550 4.150359 AGTACAGTCCATAATACCCTCCG 58.850 47.826 0.00 0.00 0.00 4.63
1670 3551 6.781507 AGTAAGTACAGTCCATAATACCCTCC 59.218 42.308 0.00 0.00 0.00 4.30
1671 3552 7.287235 ACAGTAAGTACAGTCCATAATACCCTC 59.713 40.741 0.00 0.00 0.00 4.30
1672 3553 7.130775 ACAGTAAGTACAGTCCATAATACCCT 58.869 38.462 0.00 0.00 0.00 4.34
1673 3554 7.287235 AGACAGTAAGTACAGTCCATAATACCC 59.713 40.741 9.60 0.00 41.80 3.69
1674 3555 8.235359 AGACAGTAAGTACAGTCCATAATACC 57.765 38.462 9.60 0.00 41.80 2.73
1687 3568 7.121974 TGACTTGTACGTAGACAGTAAGTAC 57.878 40.000 0.00 2.48 38.40 2.73
1715 3607 4.455533 CCTGTATTAACAAGTTGCTCAGCA 59.544 41.667 0.00 0.00 34.49 4.41
1763 3658 0.966370 ACTCCCCGACGAAGAAGAGG 60.966 60.000 0.00 0.00 0.00 3.69
1775 3670 0.949105 CGTTCACTCCAAACTCCCCG 60.949 60.000 0.00 0.00 0.00 5.73
1910 3805 4.132336 TGTGCAAAGCAAAAATGGCAATA 58.868 34.783 0.00 0.00 41.47 1.90
1911 3806 2.950309 TGTGCAAAGCAAAAATGGCAAT 59.050 36.364 0.00 0.00 41.47 3.56
1917 3812 3.341823 TGGTGTTGTGCAAAGCAAAAAT 58.658 36.364 0.00 0.00 41.47 1.82
1929 3824 4.320057 GCTCTCTGAAAATCTGGTGTTGTG 60.320 45.833 0.00 0.00 0.00 3.33
1946 3886 7.108841 TCATATAGTAAACAAACGGCTCTCT 57.891 36.000 0.00 0.00 0.00 3.10
1967 4004 6.045459 AGAGATCACCCTACTAGTCAGATCAT 59.955 42.308 17.59 8.75 34.40 2.45
1969 4006 5.876357 AGAGATCACCCTACTAGTCAGATC 58.124 45.833 0.00 6.73 0.00 2.75
1974 4011 5.944135 AGGTTAGAGATCACCCTACTAGTC 58.056 45.833 0.00 0.00 32.92 2.59
1996 4033 8.950210 TCAAAGTCAATTATTGCCTTCTAAGAG 58.050 33.333 1.63 0.00 27.25 2.85
1997 4034 8.730680 GTCAAAGTCAATTATTGCCTTCTAAGA 58.269 33.333 1.63 0.00 27.25 2.10
1998 4035 7.970614 GGTCAAAGTCAATTATTGCCTTCTAAG 59.029 37.037 1.63 0.00 27.25 2.18
2029 4070 6.012658 TGTGCAAAGACAATATGAACCTTC 57.987 37.500 0.00 0.00 0.00 3.46
2031 4072 5.711506 TGATGTGCAAAGACAATATGAACCT 59.288 36.000 0.00 0.00 0.00 3.50
2037 4078 6.600427 TGAGATGTGATGTGCAAAGACAATAT 59.400 34.615 0.00 0.00 0.00 1.28
2116 4158 5.596763 AGGTCATAGTCAACCCTTACCTAA 58.403 41.667 0.00 0.00 34.40 2.69
2145 4560 4.840271 TCTGAGATGTGATGTGCAAAGAT 58.160 39.130 0.00 0.00 0.00 2.40
2181 4854 0.106918 AGGTGTGCGTCCCTCAAAAA 60.107 50.000 0.00 0.00 0.00 1.94
2182 4855 0.534203 GAGGTGTGCGTCCCTCAAAA 60.534 55.000 9.73 0.00 45.47 2.44
2186 4859 2.048127 GTGAGGTGTGCGTCCCTC 60.048 66.667 8.09 8.09 46.20 4.30
2187 4860 3.626924 GGTGAGGTGTGCGTCCCT 61.627 66.667 0.00 0.00 0.00 4.20
2188 4861 3.254024 ATGGTGAGGTGTGCGTCCC 62.254 63.158 0.00 0.00 0.00 4.46
2189 4862 1.741770 GATGGTGAGGTGTGCGTCC 60.742 63.158 0.00 0.00 0.00 4.79
2224 4897 3.699411 TGGAAAAATCAATTGGCCCAG 57.301 42.857 5.42 0.00 0.00 4.45
2242 4915 4.503714 TCTAATTAGTTCCCTGCCTTGG 57.496 45.455 12.19 0.00 0.00 3.61
2750 5426 8.705048 AGACTTAGATCGTATTTTTCTGGTTC 57.295 34.615 0.00 0.00 0.00 3.62
2753 5429 8.630917 TCCTAGACTTAGATCGTATTTTTCTGG 58.369 37.037 0.00 0.00 0.00 3.86
2821 5497 6.208007 TCTGACTGTTTCTACAATACTTCCGA 59.792 38.462 0.00 0.00 32.92 4.55
2839 5515 3.937079 TGCTCATGCAGTATTTCTGACTG 59.063 43.478 0.00 0.00 46.27 3.51
2855 5531 7.776618 ATCATGAAATATGGTGAATGCTCAT 57.223 32.000 0.00 0.00 33.05 2.90
3150 5827 9.411189 ACTCTAAAACCCAACAAACTTTACATA 57.589 29.630 0.00 0.00 0.00 2.29
3151 5828 8.301252 ACTCTAAAACCCAACAAACTTTACAT 57.699 30.769 0.00 0.00 0.00 2.29
3212 5891 4.576463 AGCTACAATGTCCATTTTCGATCC 59.424 41.667 0.00 0.00 0.00 3.36
3216 5895 5.295431 TCAAGCTACAATGTCCATTTTCG 57.705 39.130 0.00 0.00 0.00 3.46
3228 5907 4.253685 GTGGCACTAGATTCAAGCTACAA 58.746 43.478 11.13 0.00 36.79 2.41
3231 5910 2.738643 GCGTGGCACTAGATTCAAGCTA 60.739 50.000 16.72 0.00 33.21 3.32
3241 5920 3.121030 GCTGTGGCGTGGCACTAG 61.121 66.667 24.28 19.66 0.00 2.57
3242 5921 3.252627 ATGCTGTGGCGTGGCACTA 62.253 57.895 24.28 12.92 42.25 2.74
3251 5930 0.957395 AGTGTGTAGCATGCTGTGGC 60.957 55.000 30.42 16.72 39.26 5.01
3254 5933 2.037641 TCTGAAGTGTGTAGCATGCTGT 59.962 45.455 30.42 7.67 0.00 4.40
3325 6004 9.448438 AGTTCAGTAGTTGCAATACATAATTGA 57.552 29.630 0.59 3.72 46.81 2.57
3330 6009 9.938280 AAGTTAGTTCAGTAGTTGCAATACATA 57.062 29.630 0.59 0.00 0.00 2.29
3345 6024 5.916883 CCAATCTTGCACAAAGTTAGTTCAG 59.083 40.000 0.00 0.00 37.18 3.02
3391 6070 5.528690 CCATACAACCATATCCAACAGTCTG 59.471 44.000 0.00 0.00 0.00 3.51
3392 6071 5.428457 TCCATACAACCATATCCAACAGTCT 59.572 40.000 0.00 0.00 0.00 3.24
3428 6107 7.690256 ACACACCTCAAAGAGAAATATTAGGT 58.310 34.615 0.00 0.00 36.55 3.08
3492 6173 9.544579 ACCTCTAGTAAGGATAGTAACAGTTTT 57.455 33.333 4.52 0.00 38.87 2.43
3493 6174 9.187996 GACCTCTAGTAAGGATAGTAACAGTTT 57.812 37.037 4.52 0.00 38.87 2.66
3494 6175 8.559175 AGACCTCTAGTAAGGATAGTAACAGTT 58.441 37.037 4.52 0.00 38.87 3.16
3495 6176 8.104838 AGACCTCTAGTAAGGATAGTAACAGT 57.895 38.462 4.52 0.00 38.87 3.55
3496 6177 9.715121 CTAGACCTCTAGTAAGGATAGTAACAG 57.285 40.741 4.52 0.00 40.72 3.16
3497 6178 9.444668 TCTAGACCTCTAGTAAGGATAGTAACA 57.555 37.037 4.52 0.00 44.74 2.41
3501 6182 9.173231 TCAATCTAGACCTCTAGTAAGGATAGT 57.827 37.037 4.52 0.00 44.74 2.12
3502 6183 9.444600 GTCAATCTAGACCTCTAGTAAGGATAG 57.555 40.741 4.52 6.39 44.74 2.08
3503 6184 8.095792 CGTCAATCTAGACCTCTAGTAAGGATA 58.904 40.741 4.52 0.00 44.74 2.59
3504 6185 6.938030 CGTCAATCTAGACCTCTAGTAAGGAT 59.062 42.308 4.52 0.00 44.74 3.24
3505 6186 6.289834 CGTCAATCTAGACCTCTAGTAAGGA 58.710 44.000 4.52 2.05 44.74 3.36
3506 6187 5.470777 CCGTCAATCTAGACCTCTAGTAAGG 59.529 48.000 8.83 0.00 44.74 2.69
3586 6271 7.235193 AGTCTGTCAGCATGGATATAGAAGATT 59.765 37.037 0.00 0.00 36.16 2.40
3674 6360 1.202359 GCACAACACCGGTTCAATTGT 60.202 47.619 2.97 10.93 34.21 2.71
3677 6363 1.460273 GGGCACAACACCGGTTCAAT 61.460 55.000 2.97 0.00 34.21 2.57
3685 6371 4.840271 ACTAACTAATAGGGCACAACACC 58.160 43.478 0.00 0.00 35.81 4.16
3708 6394 5.699839 AGTTTAGGCACGCTTTTTATTCAG 58.300 37.500 0.00 0.00 0.00 3.02
3731 6427 1.069513 CCAAGGTGGACGAACACACTA 59.930 52.381 14.20 0.00 40.96 2.74
3732 6428 0.179056 CCAAGGTGGACGAACACACT 60.179 55.000 14.20 7.60 40.96 3.55
3733 6429 1.782028 GCCAAGGTGGACGAACACAC 61.782 60.000 14.20 5.96 40.96 3.82
3734 6430 1.525077 GCCAAGGTGGACGAACACA 60.525 57.895 14.20 0.00 40.96 3.72
3740 6436 2.978010 GTGGTGCCAAGGTGGACG 60.978 66.667 0.00 0.00 40.96 4.79
3743 6439 2.598394 CCTGTGGTGCCAAGGTGG 60.598 66.667 0.00 0.00 41.55 4.61
3871 6567 1.890979 CGATGAGGCAGCCCATGTC 60.891 63.158 17.45 5.87 0.00 3.06
3872 6568 2.191375 CGATGAGGCAGCCCATGT 59.809 61.111 17.45 0.00 0.00 3.21
3932 6628 1.205655 CCCTGAGAGAGACGATTGCAA 59.794 52.381 0.00 0.00 0.00 4.08
3979 6675 1.226717 GGCTGTAGAAGTCGGCGAG 60.227 63.158 11.20 0.00 37.99 5.03
3981 6677 2.202756 GGGCTGTAGAAGTCGGCG 60.203 66.667 0.00 0.00 37.99 6.46
4007 6703 2.609299 TGGGGTTGCGGAGGATCA 60.609 61.111 0.00 0.00 36.25 2.92
4260 6972 1.079336 GGCCTCCGTGTAGTGAACC 60.079 63.158 0.00 0.00 0.00 3.62
4375 7088 1.094785 ATGTGCCGCCTGTAATTGTC 58.905 50.000 0.00 0.00 0.00 3.18
4378 7091 1.472480 GTTCATGTGCCGCCTGTAATT 59.528 47.619 0.00 0.00 0.00 1.40
4389 7102 2.090658 CGACACTAAGACGTTCATGTGC 59.909 50.000 10.92 5.45 0.00 4.57
4407 7161 5.652744 ATACATTTACTTTCATCCGCGAC 57.347 39.130 8.23 0.00 0.00 5.19
4430 7184 9.814899 CAATCCAAATAATACCAGCAAATGTTA 57.185 29.630 0.00 0.00 0.00 2.41
4431 7185 8.538701 TCAATCCAAATAATACCAGCAAATGTT 58.461 29.630 0.00 0.00 0.00 2.71
4433 7187 8.945481 TTCAATCCAAATAATACCAGCAAATG 57.055 30.769 0.00 0.00 0.00 2.32
4434 7188 9.382275 GTTTCAATCCAAATAATACCAGCAAAT 57.618 29.630 0.00 0.00 0.00 2.32
4435 7189 7.543868 CGTTTCAATCCAAATAATACCAGCAAA 59.456 33.333 0.00 0.00 0.00 3.68
4436 7190 7.032580 CGTTTCAATCCAAATAATACCAGCAA 58.967 34.615 0.00 0.00 0.00 3.91
4437 7191 6.375736 TCGTTTCAATCCAAATAATACCAGCA 59.624 34.615 0.00 0.00 0.00 4.41
4438 7192 6.791303 TCGTTTCAATCCAAATAATACCAGC 58.209 36.000 0.00 0.00 0.00 4.85
4441 7195 7.193595 CACCTCGTTTCAATCCAAATAATACC 58.806 38.462 0.00 0.00 0.00 2.73
4442 7196 6.691388 GCACCTCGTTTCAATCCAAATAATAC 59.309 38.462 0.00 0.00 0.00 1.89
4474 7233 2.184533 TGTTTCGATGCCCTCCTTCTA 58.815 47.619 0.00 0.00 0.00 2.10
4476 7235 1.672881 CATGTTTCGATGCCCTCCTTC 59.327 52.381 0.00 0.00 0.00 3.46
4478 7237 0.107017 CCATGTTTCGATGCCCTCCT 60.107 55.000 0.00 0.00 0.00 3.69
4480 7239 1.728490 GCCCATGTTTCGATGCCCTC 61.728 60.000 0.00 0.00 0.00 4.30
4481 7240 1.754234 GCCCATGTTTCGATGCCCT 60.754 57.895 0.00 0.00 0.00 5.19
4537 7326 7.933577 TGAATCGGAGTAGATTTGATAAAGCAT 59.066 33.333 0.00 0.00 40.58 3.79
4539 7328 7.715265 TGAATCGGAGTAGATTTGATAAAGC 57.285 36.000 0.00 0.00 40.58 3.51
4607 7401 9.847224 TCAAAGTTCTTGTTTTATCCTAAGTCT 57.153 29.630 0.00 0.00 0.00 3.24
4709 7507 9.374711 GGGGCTAGCTATTTAGATATAGAAGAT 57.625 37.037 15.72 0.00 31.10 2.40
4710 7508 7.785506 GGGGGCTAGCTATTTAGATATAGAAGA 59.214 40.741 15.72 0.00 31.10 2.87
4711 7509 7.565398 TGGGGGCTAGCTATTTAGATATAGAAG 59.435 40.741 15.72 0.00 31.10 2.85
4712 7510 7.427501 TGGGGGCTAGCTATTTAGATATAGAA 58.572 38.462 15.72 0.00 31.10 2.10
4713 7511 6.993408 TGGGGGCTAGCTATTTAGATATAGA 58.007 40.000 15.72 0.00 31.10 1.98
4715 7513 9.738277 TTAATGGGGGCTAGCTATTTAGATATA 57.262 33.333 15.72 0.00 0.00 0.86
4720 7518 5.876357 TGTTAATGGGGGCTAGCTATTTAG 58.124 41.667 15.72 0.00 0.00 1.85
4721 7519 5.915744 TGTTAATGGGGGCTAGCTATTTA 57.084 39.130 15.72 3.71 0.00 1.40
4723 7521 4.806952 TTGTTAATGGGGGCTAGCTATT 57.193 40.909 15.72 12.29 0.00 1.73
4724 7522 5.339423 AATTGTTAATGGGGGCTAGCTAT 57.661 39.130 15.72 1.73 0.00 2.97
4725 7523 4.806952 AATTGTTAATGGGGGCTAGCTA 57.193 40.909 15.72 0.00 0.00 3.32
4726 7524 3.688049 AATTGTTAATGGGGGCTAGCT 57.312 42.857 15.72 0.00 0.00 3.32
4727 7525 3.960755 AGAAATTGTTAATGGGGGCTAGC 59.039 43.478 6.04 6.04 0.00 3.42
4728 7526 5.449553 AGAGAAATTGTTAATGGGGGCTAG 58.550 41.667 0.00 0.00 0.00 3.42
4730 7528 4.264352 TGAGAGAAATTGTTAATGGGGGCT 60.264 41.667 0.00 0.00 0.00 5.19
4731 7529 4.023291 TGAGAGAAATTGTTAATGGGGGC 58.977 43.478 0.00 0.00 0.00 5.80
4732 7530 5.480073 TGTTGAGAGAAATTGTTAATGGGGG 59.520 40.000 0.00 0.00 0.00 5.40
4733 7531 6.588719 TGTTGAGAGAAATTGTTAATGGGG 57.411 37.500 0.00 0.00 0.00 4.96
4734 7532 6.532657 GCATGTTGAGAGAAATTGTTAATGGG 59.467 38.462 0.00 0.00 0.00 4.00
4736 7534 8.523523 TTGCATGTTGAGAGAAATTGTTAATG 57.476 30.769 0.00 0.00 0.00 1.90
4737 7535 7.330208 GCTTGCATGTTGAGAGAAATTGTTAAT 59.670 33.333 1.14 0.00 0.00 1.40
4738 7536 6.642131 GCTTGCATGTTGAGAGAAATTGTTAA 59.358 34.615 1.14 0.00 0.00 2.01
4739 7537 6.151691 GCTTGCATGTTGAGAGAAATTGTTA 58.848 36.000 1.14 0.00 0.00 2.41
4740 7538 4.986659 GCTTGCATGTTGAGAGAAATTGTT 59.013 37.500 1.14 0.00 0.00 2.83
4741 7539 4.038282 TGCTTGCATGTTGAGAGAAATTGT 59.962 37.500 1.14 0.00 0.00 2.71
4742 7540 4.552355 TGCTTGCATGTTGAGAGAAATTG 58.448 39.130 1.14 0.00 0.00 2.32
4743 7541 4.859304 TGCTTGCATGTTGAGAGAAATT 57.141 36.364 1.14 0.00 0.00 1.82
4745 7543 4.168922 CATGCTTGCATGTTGAGAGAAA 57.831 40.909 23.00 0.00 0.00 2.52
4760 7558 1.475280 GTGTGATGATGTGGCATGCTT 59.525 47.619 18.92 0.00 0.00 3.91
4762 7560 0.812549 TGTGTGATGATGTGGCATGC 59.187 50.000 9.90 9.90 0.00 4.06
4763 7561 2.229302 TGTTGTGTGATGATGTGGCATG 59.771 45.455 0.00 0.00 0.00 4.06
4765 7563 1.978454 TGTTGTGTGATGATGTGGCA 58.022 45.000 0.00 0.00 0.00 4.92
4767 7565 2.229302 TGCATGTTGTGTGATGATGTGG 59.771 45.455 0.00 0.00 0.00 4.17
4768 7566 3.562567 TGCATGTTGTGTGATGATGTG 57.437 42.857 0.00 0.00 0.00 3.21
4769 7567 3.759618 TCATGCATGTTGTGTGATGATGT 59.240 39.130 25.43 0.00 29.35 3.06
4770 7568 4.095782 TCTCATGCATGTTGTGTGATGATG 59.904 41.667 25.43 0.00 32.15 3.07
4772 7570 3.677190 TCTCATGCATGTTGTGTGATGA 58.323 40.909 25.43 2.85 31.86 2.92
4773 7571 4.428615 TTCTCATGCATGTTGTGTGATG 57.571 40.909 25.43 0.00 0.00 3.07
4774 7572 5.456548 TTTTCTCATGCATGTTGTGTGAT 57.543 34.783 25.43 0.00 0.00 3.06
4775 7573 4.915158 TTTTCTCATGCATGTTGTGTGA 57.085 36.364 25.43 12.31 0.00 3.58
4776 7574 5.509605 CATTTTCTCATGCATGTTGTGTG 57.490 39.130 25.43 14.40 0.00 3.82
4787 7585 0.826062 GGGGTGGGCATTTTCTCATG 59.174 55.000 0.00 0.00 0.00 3.07
4788 7586 0.325577 GGGGGTGGGCATTTTCTCAT 60.326 55.000 0.00 0.00 0.00 2.90
4789 7587 1.078347 GGGGGTGGGCATTTTCTCA 59.922 57.895 0.00 0.00 0.00 3.27
4790 7588 1.078347 TGGGGGTGGGCATTTTCTC 59.922 57.895 0.00 0.00 0.00 2.87
4791 7589 1.229177 GTGGGGGTGGGCATTTTCT 60.229 57.895 0.00 0.00 0.00 2.52
4792 7590 0.040499 TAGTGGGGGTGGGCATTTTC 59.960 55.000 0.00 0.00 0.00 2.29
4793 7591 0.715987 ATAGTGGGGGTGGGCATTTT 59.284 50.000 0.00 0.00 0.00 1.82
4794 7592 0.261696 GATAGTGGGGGTGGGCATTT 59.738 55.000 0.00 0.00 0.00 2.32
4795 7593 0.923729 TGATAGTGGGGGTGGGCATT 60.924 55.000 0.00 0.00 0.00 3.56
4796 7594 0.702356 ATGATAGTGGGGGTGGGCAT 60.702 55.000 0.00 0.00 0.00 4.40
4797 7595 0.029577 TATGATAGTGGGGGTGGGCA 60.030 55.000 0.00 0.00 0.00 5.36
4798 7596 1.073923 CTTATGATAGTGGGGGTGGGC 59.926 57.143 0.00 0.00 0.00 5.36
4799 7597 2.372172 GACTTATGATAGTGGGGGTGGG 59.628 54.545 0.00 0.00 0.00 4.61
4800 7598 3.318313 AGACTTATGATAGTGGGGGTGG 58.682 50.000 0.00 0.00 0.00 4.61
4801 7599 4.227197 AGAGACTTATGATAGTGGGGGTG 58.773 47.826 0.00 0.00 0.00 4.61
4802 7600 4.561254 AGAGACTTATGATAGTGGGGGT 57.439 45.455 0.00 0.00 0.00 4.95
4803 7601 6.326583 TGTTAAGAGACTTATGATAGTGGGGG 59.673 42.308 0.00 0.00 0.00 5.40
4804 7602 7.361457 TGTTAAGAGACTTATGATAGTGGGG 57.639 40.000 0.00 0.00 0.00 4.96
4805 7603 7.386299 GCATGTTAAGAGACTTATGATAGTGGG 59.614 40.741 0.00 0.00 0.00 4.61
4806 7604 7.928167 TGCATGTTAAGAGACTTATGATAGTGG 59.072 37.037 0.00 0.00 0.00 4.00
4807 7605 8.877808 TGCATGTTAAGAGACTTATGATAGTG 57.122 34.615 0.00 0.00 0.00 2.74
4808 7606 9.539825 CTTGCATGTTAAGAGACTTATGATAGT 57.460 33.333 6.11 0.00 0.00 2.12
4809 7607 8.494347 GCTTGCATGTTAAGAGACTTATGATAG 58.506 37.037 13.75 0.00 0.00 2.08
4810 7608 7.986889 TGCTTGCATGTTAAGAGACTTATGATA 59.013 33.333 13.75 0.00 0.00 2.15
4811 7609 6.825213 TGCTTGCATGTTAAGAGACTTATGAT 59.175 34.615 13.75 0.00 0.00 2.45
4812 7610 6.172630 TGCTTGCATGTTAAGAGACTTATGA 58.827 36.000 13.75 0.00 0.00 2.15
4813 7611 6.426980 TGCTTGCATGTTAAGAGACTTATG 57.573 37.500 13.75 0.00 0.00 1.90
4814 7612 6.600822 ACATGCTTGCATGTTAAGAGACTTAT 59.399 34.615 28.83 7.77 42.56 1.73
4815 7613 5.939883 ACATGCTTGCATGTTAAGAGACTTA 59.060 36.000 28.83 0.00 42.56 2.24
4816 7614 4.763793 ACATGCTTGCATGTTAAGAGACTT 59.236 37.500 28.83 8.39 42.56 3.01
4817 7615 4.330250 ACATGCTTGCATGTTAAGAGACT 58.670 39.130 28.83 9.02 42.56 3.24
4818 7616 4.154737 TGACATGCTTGCATGTTAAGAGAC 59.845 41.667 32.76 21.73 44.88 3.36
4819 7617 4.325972 TGACATGCTTGCATGTTAAGAGA 58.674 39.130 32.76 15.71 44.88 3.10
4820 7618 4.690184 TGACATGCTTGCATGTTAAGAG 57.310 40.909 32.76 12.43 44.88 2.85
4821 7619 4.989044 CATGACATGCTTGCATGTTAAGA 58.011 39.130 32.76 20.88 44.88 2.10
4852 7650 8.196771 TGTTTGCATGTTGAGATAAGTCTTTTT 58.803 29.630 0.00 0.00 33.97 1.94
4853 7651 7.715657 TGTTTGCATGTTGAGATAAGTCTTTT 58.284 30.769 0.00 0.00 33.97 2.27
4854 7652 7.275888 TGTTTGCATGTTGAGATAAGTCTTT 57.724 32.000 0.00 0.00 33.97 2.52
4855 7653 6.882610 TGTTTGCATGTTGAGATAAGTCTT 57.117 33.333 0.00 0.00 33.97 3.01
4856 7654 7.607607 TGTATGTTTGCATGTTGAGATAAGTCT 59.392 33.333 0.00 0.00 36.58 3.24
4857 7655 7.751732 TGTATGTTTGCATGTTGAGATAAGTC 58.248 34.615 0.00 0.00 36.58 3.01
4858 7656 7.686438 TGTATGTTTGCATGTTGAGATAAGT 57.314 32.000 0.00 0.00 36.58 2.24
4861 7659 9.612066 TCTTATGTATGTTTGCATGTTGAGATA 57.388 29.630 0.00 0.00 36.58 1.98
4862 7660 8.510243 TCTTATGTATGTTTGCATGTTGAGAT 57.490 30.769 0.00 0.00 36.58 2.75
4863 7661 7.920160 TCTTATGTATGTTTGCATGTTGAGA 57.080 32.000 0.00 0.00 36.58 3.27
4864 7662 9.577110 AATTCTTATGTATGTTTGCATGTTGAG 57.423 29.630 0.00 0.00 36.58 3.02
4865 7663 9.926158 AAATTCTTATGTATGTTTGCATGTTGA 57.074 25.926 0.00 0.00 36.58 3.18
4997 7795 9.935682 GTGATTCGTTGTATGAAACATGAATAT 57.064 29.630 0.00 0.00 40.68 1.28
4998 7796 8.940952 TGTGATTCGTTGTATGAAACATGAATA 58.059 29.630 0.00 0.00 40.68 1.75
4999 7797 7.815641 TGTGATTCGTTGTATGAAACATGAAT 58.184 30.769 0.00 6.07 42.06 2.57
5000 7798 7.195839 TGTGATTCGTTGTATGAAACATGAA 57.804 32.000 0.00 0.00 38.10 2.57
5001 7799 6.793492 TGTGATTCGTTGTATGAAACATGA 57.207 33.333 0.00 0.00 38.10 3.07
5002 7800 7.750014 TCAATGTGATTCGTTGTATGAAACATG 59.250 33.333 0.00 0.00 42.02 3.21
5003 7801 7.815641 TCAATGTGATTCGTTGTATGAAACAT 58.184 30.769 0.00 0.00 42.02 2.71
5004 7802 7.195839 TCAATGTGATTCGTTGTATGAAACA 57.804 32.000 0.00 0.00 42.02 2.83
5005 7803 8.500837 TTTCAATGTGATTCGTTGTATGAAAC 57.499 30.769 0.00 0.00 42.02 2.78
5008 7806 9.934190 CATATTTCAATGTGATTCGTTGTATGA 57.066 29.630 0.00 0.00 42.02 2.15
5009 7807 9.720667 ACATATTTCAATGTGATTCGTTGTATG 57.279 29.630 3.52 0.00 42.02 2.39
5011 7809 9.553418 CAACATATTTCAATGTGATTCGTTGTA 57.447 29.630 3.52 0.00 39.98 2.41
5012 7810 8.296000 TCAACATATTTCAATGTGATTCGTTGT 58.704 29.630 3.52 0.00 39.98 3.32
5013 7811 8.672214 TCAACATATTTCAATGTGATTCGTTG 57.328 30.769 3.52 0.00 39.98 4.10
5014 7812 9.689976 TTTCAACATATTTCAATGTGATTCGTT 57.310 25.926 3.52 0.00 39.98 3.85
5015 7813 9.689976 TTTTCAACATATTTCAATGTGATTCGT 57.310 25.926 3.52 0.00 39.98 3.85
5025 7823 9.092876 GCGGGAATATTTTTCAACATATTTCAA 57.907 29.630 0.00 0.00 0.00 2.69
5026 7824 8.253810 TGCGGGAATATTTTTCAACATATTTCA 58.746 29.630 0.00 0.00 0.00 2.69
5027 7825 8.641499 TGCGGGAATATTTTTCAACATATTTC 57.359 30.769 0.00 0.00 0.00 2.17
5028 7826 8.878769 GTTGCGGGAATATTTTTCAACATATTT 58.121 29.630 13.83 0.00 34.28 1.40
5029 7827 8.037758 TGTTGCGGGAATATTTTTCAACATATT 58.962 29.630 15.87 0.00 37.83 1.28
5030 7828 7.551585 TGTTGCGGGAATATTTTTCAACATAT 58.448 30.769 15.87 0.00 37.83 1.78
5031 7829 6.925211 TGTTGCGGGAATATTTTTCAACATA 58.075 32.000 15.87 3.20 37.83 2.29
5032 7830 5.788450 TGTTGCGGGAATATTTTTCAACAT 58.212 33.333 15.87 0.00 37.83 2.71
5033 7831 5.201713 TGTTGCGGGAATATTTTTCAACA 57.798 34.783 15.87 15.87 39.63 3.33
5034 7832 5.387958 CGTTGTTGCGGGAATATTTTTCAAC 60.388 40.000 12.70 12.70 34.59 3.18
5035 7833 4.681942 CGTTGTTGCGGGAATATTTTTCAA 59.318 37.500 0.00 0.00 0.00 2.69
5036 7834 4.230657 CGTTGTTGCGGGAATATTTTTCA 58.769 39.130 0.00 0.00 0.00 2.69
5037 7835 4.089351 CACGTTGTTGCGGGAATATTTTTC 59.911 41.667 0.00 0.00 37.48 2.29
5038 7836 3.984633 CACGTTGTTGCGGGAATATTTTT 59.015 39.130 0.00 0.00 37.48 1.94
5039 7837 3.570559 CACGTTGTTGCGGGAATATTTT 58.429 40.909 0.00 0.00 37.48 1.82
5040 7838 2.669950 GCACGTTGTTGCGGGAATATTT 60.670 45.455 0.00 0.00 37.48 1.40
5041 7839 1.135517 GCACGTTGTTGCGGGAATATT 60.136 47.619 0.00 0.00 37.48 1.28
5042 7840 0.450184 GCACGTTGTTGCGGGAATAT 59.550 50.000 0.00 0.00 37.48 1.28
5043 7841 1.870383 GCACGTTGTTGCGGGAATA 59.130 52.632 0.00 0.00 37.48 1.75
5044 7842 2.642700 GCACGTTGTTGCGGGAAT 59.357 55.556 0.00 0.00 37.48 3.01
5050 7848 2.248274 GATACCCCGCACGTTGTTGC 62.248 60.000 0.00 0.00 39.28 4.17
5051 7849 0.951525 TGATACCCCGCACGTTGTTG 60.952 55.000 0.00 0.00 0.00 3.33
5052 7850 0.035820 ATGATACCCCGCACGTTGTT 60.036 50.000 0.00 0.00 0.00 2.83
5053 7851 0.461339 GATGATACCCCGCACGTTGT 60.461 55.000 0.00 0.00 0.00 3.32
5054 7852 0.179084 AGATGATACCCCGCACGTTG 60.179 55.000 0.00 0.00 0.00 4.10
5055 7853 1.340248 CTAGATGATACCCCGCACGTT 59.660 52.381 0.00 0.00 0.00 3.99
5056 7854 0.959553 CTAGATGATACCCCGCACGT 59.040 55.000 0.00 0.00 0.00 4.49
5057 7855 0.959553 ACTAGATGATACCCCGCACG 59.040 55.000 0.00 0.00 0.00 5.34
5058 7856 2.102588 ACAACTAGATGATACCCCGCAC 59.897 50.000 7.05 0.00 0.00 5.34
5059 7857 2.394632 ACAACTAGATGATACCCCGCA 58.605 47.619 7.05 0.00 0.00 5.69
5060 7858 3.573110 AGTACAACTAGATGATACCCCGC 59.427 47.826 7.05 0.00 0.00 6.13
5061 7859 6.889301 TTAGTACAACTAGATGATACCCCG 57.111 41.667 7.05 0.00 31.47 5.73
5062 7860 7.015389 AGCTTTAGTACAACTAGATGATACCCC 59.985 40.741 7.05 0.00 31.47 4.95
5063 7861 7.868415 CAGCTTTAGTACAACTAGATGATACCC 59.132 40.741 7.05 0.00 31.47 3.69
5064 7862 7.868415 CCAGCTTTAGTACAACTAGATGATACC 59.132 40.741 7.05 0.00 31.47 2.73
5065 7863 7.868415 CCCAGCTTTAGTACAACTAGATGATAC 59.132 40.741 7.05 5.95 31.47 2.24
5066 7864 7.783119 TCCCAGCTTTAGTACAACTAGATGATA 59.217 37.037 7.05 0.00 31.47 2.15
5067 7865 6.611642 TCCCAGCTTTAGTACAACTAGATGAT 59.388 38.462 7.05 0.00 31.47 2.45
5068 7866 5.955959 TCCCAGCTTTAGTACAACTAGATGA 59.044 40.000 7.05 0.00 31.47 2.92
5069 7867 6.043411 GTCCCAGCTTTAGTACAACTAGATG 58.957 44.000 0.00 0.00 31.47 2.90
5070 7868 5.720041 TGTCCCAGCTTTAGTACAACTAGAT 59.280 40.000 0.00 0.00 31.47 1.98
5071 7869 5.081728 TGTCCCAGCTTTAGTACAACTAGA 58.918 41.667 0.00 0.00 31.47 2.43
5072 7870 5.401531 TGTCCCAGCTTTAGTACAACTAG 57.598 43.478 0.00 0.00 31.47 2.57
5073 7871 5.811796 TTGTCCCAGCTTTAGTACAACTA 57.188 39.130 0.00 0.00 0.00 2.24
5074 7872 4.699925 TTGTCCCAGCTTTAGTACAACT 57.300 40.909 0.00 0.00 0.00 3.16
5075 7873 5.001232 TGATTGTCCCAGCTTTAGTACAAC 58.999 41.667 0.00 0.00 30.40 3.32
5076 7874 5.235850 TGATTGTCCCAGCTTTAGTACAA 57.764 39.130 0.00 0.00 0.00 2.41
5086 7884 3.438087 CGATCCATATTGATTGTCCCAGC 59.562 47.826 0.00 0.00 0.00 4.85
5090 7888 4.637534 CCATCCGATCCATATTGATTGTCC 59.362 45.833 3.89 0.00 0.00 4.02
5097 7895 5.667539 ACTACTCCATCCGATCCATATTG 57.332 43.478 0.00 0.00 0.00 1.90
5107 7905 7.119407 TCTCGATAAAATCTACTACTCCATCCG 59.881 40.741 0.00 0.00 0.00 4.18
5108 7906 8.238631 GTCTCGATAAAATCTACTACTCCATCC 58.761 40.741 0.00 0.00 0.00 3.51
5111 7909 8.749026 AAGTCTCGATAAAATCTACTACTCCA 57.251 34.615 0.00 0.00 0.00 3.86
5149 7947 9.674068 GAGGTCATAAGGGAGGATAAATATTTC 57.326 37.037 3.39 0.00 0.00 2.17
5157 7955 7.780822 AGATTTAGAGGTCATAAGGGAGGATA 58.219 38.462 0.00 0.00 0.00 2.59
5167 7965 4.887655 TGTCTGCGAGATTTAGAGGTCATA 59.112 41.667 0.00 0.00 0.00 2.15
5185 7983 6.249893 CGAATAAATCTTGTTGTGCATGTCTG 59.750 38.462 0.00 0.00 0.00 3.51
5186 7984 6.149308 TCGAATAAATCTTGTTGTGCATGTCT 59.851 34.615 0.00 0.00 0.00 3.41
5223 8022 4.156556 GCAAGTCATTTAGCCTGAACATCA 59.843 41.667 0.00 0.00 0.00 3.07
5262 8061 1.211212 GATGTTACCTACCACACCCCC 59.789 57.143 0.00 0.00 0.00 5.40
5273 8073 6.928348 TCATTGTATATCCCGATGTTACCT 57.072 37.500 0.00 0.00 0.00 3.08
5275 8075 9.647797 TGTATTCATTGTATATCCCGATGTTAC 57.352 33.333 0.00 6.80 0.00 2.50
5309 8109 5.420739 GGTAGCCTCCCAAATCAAACAATTA 59.579 40.000 0.00 0.00 0.00 1.40
5310 8110 4.222810 GGTAGCCTCCCAAATCAAACAATT 59.777 41.667 0.00 0.00 0.00 2.32
5311 8111 3.769300 GGTAGCCTCCCAAATCAAACAAT 59.231 43.478 0.00 0.00 0.00 2.71
5312 8112 3.161866 GGTAGCCTCCCAAATCAAACAA 58.838 45.455 0.00 0.00 0.00 2.83
5313 8113 2.109128 TGGTAGCCTCCCAAATCAAACA 59.891 45.455 0.00 0.00 0.00 2.83
5314 8114 2.802719 TGGTAGCCTCCCAAATCAAAC 58.197 47.619 0.00 0.00 0.00 2.93
5315 8115 3.534357 TTGGTAGCCTCCCAAATCAAA 57.466 42.857 0.00 0.00 38.98 2.69
5316 8116 3.756082 ATTGGTAGCCTCCCAAATCAA 57.244 42.857 0.00 0.00 44.70 2.57
5317 8117 3.269381 AGAATTGGTAGCCTCCCAAATCA 59.731 43.478 6.86 0.00 44.70 2.57
5318 8118 3.633986 CAGAATTGGTAGCCTCCCAAATC 59.366 47.826 0.00 0.00 44.70 2.17
5319 8119 3.628257 CCAGAATTGGTAGCCTCCCAAAT 60.628 47.826 0.00 0.00 44.70 2.32
5320 8120 2.291540 CCAGAATTGGTAGCCTCCCAAA 60.292 50.000 0.00 0.00 44.70 3.28
5321 8121 1.284785 CCAGAATTGGTAGCCTCCCAA 59.715 52.381 0.00 0.00 45.55 4.12
5322 8122 0.918983 CCAGAATTGGTAGCCTCCCA 59.081 55.000 0.00 0.00 39.79 4.37
5323 8123 1.213296 TCCAGAATTGGTAGCCTCCC 58.787 55.000 0.00 0.00 45.26 4.30
5324 8124 3.584733 ATTCCAGAATTGGTAGCCTCC 57.415 47.619 0.00 0.00 45.26 4.30
5325 8125 5.196695 AGAAATTCCAGAATTGGTAGCCTC 58.803 41.667 6.39 0.00 45.26 4.70
5326 8126 5.198602 AGAAATTCCAGAATTGGTAGCCT 57.801 39.130 6.39 0.00 45.26 4.58
5327 8127 5.654209 AGAAGAAATTCCAGAATTGGTAGCC 59.346 40.000 6.39 0.00 45.26 3.93
5328 8128 6.457528 CGAGAAGAAATTCCAGAATTGGTAGC 60.458 42.308 6.39 0.00 45.26 3.58
5329 8129 6.818644 TCGAGAAGAAATTCCAGAATTGGTAG 59.181 38.462 6.39 0.00 45.26 3.18
5330 8130 6.707290 TCGAGAAGAAATTCCAGAATTGGTA 58.293 36.000 6.39 0.00 45.26 3.25
5331 8131 5.560724 TCGAGAAGAAATTCCAGAATTGGT 58.439 37.500 6.39 0.00 45.26 3.67
5332 8132 5.877012 TCTCGAGAAGAAATTCCAGAATTGG 59.123 40.000 14.01 0.00 46.49 3.16
5333 8133 6.974932 TCTCGAGAAGAAATTCCAGAATTG 57.025 37.500 14.01 0.00 40.57 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.