Multiple sequence alignment - TraesCS5A01G211700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G211700 chr5A 100.000 4932 0 0 1 4932 426930071 426935002 0.000000e+00 9108.0
1 TraesCS5A01G211700 chr5A 100.000 2993 0 0 5289 8281 426935359 426938351 0.000000e+00 5528.0
2 TraesCS5A01G211700 chr5A 97.287 1364 29 3 1156 2519 623555300 623556655 0.000000e+00 2307.0
3 TraesCS5A01G211700 chr5A 95.982 1369 47 2 1156 2524 78265444 78266804 0.000000e+00 2217.0
4 TraesCS5A01G211700 chr5A 94.263 1377 42 6 1156 2532 78324276 78325615 0.000000e+00 2071.0
5 TraesCS5A01G211700 chr5A 98.901 182 1 1 4029 4210 596662170 596662350 2.880000e-84 324.0
6 TraesCS5A01G211700 chr5A 76.904 394 67 16 6297 6676 76488117 76487734 1.410000e-47 202.0
7 TraesCS5A01G211700 chr5A 85.211 142 11 6 2970 3109 608313584 608313717 4.030000e-28 137.0
8 TraesCS5A01G211700 chr5A 90.000 70 5 2 3125 3193 608314244 608314312 1.140000e-13 89.8
9 TraesCS5A01G211700 chr5A 81.148 122 12 6 3010 3129 602235181 602235293 4.120000e-13 87.9
10 TraesCS5A01G211700 chr5B 93.010 2475 113 23 5845 8281 382892895 382890443 0.000000e+00 3557.0
11 TraesCS5A01G211700 chr5B 93.664 1452 73 8 2591 4027 382897793 382896346 0.000000e+00 2154.0
12 TraesCS5A01G211700 chr5B 90.191 734 39 10 4217 4924 382896340 382895614 0.000000e+00 926.0
13 TraesCS5A01G211700 chr5B 93.182 528 29 5 5324 5849 382895129 382894607 0.000000e+00 769.0
14 TraesCS5A01G211700 chr5B 83.208 798 51 26 4 738 382908053 382907276 0.000000e+00 654.0
15 TraesCS5A01G211700 chr5B 99.444 180 1 0 4029 4208 660145632 660145811 2.230000e-85 327.0
16 TraesCS5A01G211700 chr5B 95.876 194 6 2 4029 4220 276920289 276920096 6.240000e-81 313.0
17 TraesCS5A01G211700 chr5B 80.692 347 27 13 430 738 382907091 382906747 5.000000e-57 233.0
18 TraesCS5A01G211700 chr5B 85.841 226 20 6 2970 3193 62942979 62942764 6.460000e-56 230.0
19 TraesCS5A01G211700 chr5B 80.403 347 27 15 430 738 382906562 382906219 8.360000e-55 226.0
20 TraesCS5A01G211700 chr5B 100.000 73 0 0 594 666 112585937 112586009 1.450000e-27 135.0
21 TraesCS5A01G211700 chr5B 96.226 53 2 0 2531 2583 382897992 382897940 4.120000e-13 87.9
22 TraesCS5A01G211700 chr5B 91.935 62 4 1 2970 3030 599781893 599781954 1.480000e-12 86.1
23 TraesCS5A01G211700 chr5D 94.163 2210 101 14 5356 7559 329782788 329780601 0.000000e+00 3341.0
24 TraesCS5A01G211700 chr5D 94.865 1519 50 10 2531 4029 329785406 329783896 0.000000e+00 2348.0
25 TraesCS5A01G211700 chr5D 90.591 744 37 10 4209 4932 329783900 329783170 0.000000e+00 955.0
26 TraesCS5A01G211700 chr5D 93.612 454 15 7 7835 8281 329780226 329779780 0.000000e+00 665.0
27 TraesCS5A01G211700 chr5D 84.497 587 49 15 571 1152 329787265 329786716 7.310000e-150 542.0
28 TraesCS5A01G211700 chr5D 88.571 315 15 12 8 322 329790274 329789981 6.110000e-96 363.0
29 TraesCS5A01G211700 chr5D 94.059 202 12 0 951 1152 329786238 329786037 2.900000e-79 307.0
30 TraesCS5A01G211700 chr5D 98.000 50 0 1 7791 7839 329780293 329780244 1.480000e-12 86.1
31 TraesCS5A01G211700 chr1A 96.514 1377 40 2 1156 2532 244509852 244511220 0.000000e+00 2270.0
32 TraesCS5A01G211700 chr1A 96.233 1354 43 2 1156 2509 587387090 587388435 0.000000e+00 2211.0
33 TraesCS5A01G211700 chr1A 95.280 1377 56 4 1156 2531 97645988 97647356 0.000000e+00 2174.0
34 TraesCS5A01G211700 chr1A 90.286 525 26 2 1159 1658 452019289 452018765 0.000000e+00 664.0
35 TraesCS5A01G211700 chr1A 78.462 390 52 19 6296 6661 333553546 333553165 8.360000e-55 226.0
36 TraesCS5A01G211700 chr1A 76.263 396 66 19 6297 6676 585368860 585369243 1.420000e-42 185.0
37 TraesCS5A01G211700 chr2B 95.197 1395 41 5 1156 2532 596912304 596913690 0.000000e+00 2182.0
38 TraesCS5A01G211700 chr3D 92.907 860 48 7 1659 2518 281330343 281331189 0.000000e+00 1238.0
39 TraesCS5A01G211700 chr4A 92.229 875 55 7 1659 2532 599904143 599905005 0.000000e+00 1227.0
40 TraesCS5A01G211700 chr4A 95.876 194 5 3 4029 4222 317089630 317089820 2.240000e-80 311.0
41 TraesCS5A01G211700 chr2A 90.643 887 60 13 1658 2544 426711837 426710974 0.000000e+00 1157.0
42 TraesCS5A01G211700 chr2A 91.681 601 38 6 1933 2532 734549219 734548630 0.000000e+00 822.0
43 TraesCS5A01G211700 chr2A 96.875 192 4 2 4029 4219 649490196 649490006 3.730000e-83 320.0
44 TraesCS5A01G211700 chr2A 94.118 85 5 0 591 675 756836298 756836214 6.750000e-26 130.0
45 TraesCS5A01G211700 chr7D 92.308 611 34 7 1659 2268 403215354 403215952 0.000000e+00 856.0
46 TraesCS5A01G211700 chr7D 82.222 225 31 3 2970 3193 589197364 589197148 1.420000e-42 185.0
47 TraesCS5A01G211700 chr1D 90.476 525 25 2 1159 1658 351246294 351245770 0.000000e+00 669.0
48 TraesCS5A01G211700 chr7A 98.370 184 1 1 4029 4210 554383139 554383322 1.040000e-83 322.0
49 TraesCS5A01G211700 chr4B 97.861 187 2 2 4029 4213 295687848 295687662 1.040000e-83 322.0
50 TraesCS5A01G211700 chr6B 97.849 186 2 2 4029 4214 475722860 475722677 3.730000e-83 320.0
51 TraesCS5A01G211700 chr6B 96.410 195 4 3 4029 4222 93384528 93384720 1.340000e-82 318.0
52 TraesCS5A01G211700 chr6B 80.973 226 32 6 2970 3193 544051170 544050954 1.430000e-37 169.0
53 TraesCS5A01G211700 chr6B 93.023 86 5 1 592 676 41858424 41858509 3.140000e-24 124.0
54 TraesCS5A01G211700 chr6A 88.496 226 16 3 2970 3193 106984044 106983827 1.770000e-66 265.0
55 TraesCS5A01G211700 chr6A 86.124 209 16 7 2989 3193 412366256 412366057 6.510000e-51 213.0
56 TraesCS5A01G211700 chr6D 87.500 208 14 5 2989 3193 303623276 303623078 6.460000e-56 230.0
57 TraesCS5A01G211700 chr3A 78.284 373 54 10 6314 6665 709437507 709437873 1.810000e-51 215.0
58 TraesCS5A01G211700 chrUn 82.488 217 26 9 2991 3204 282486920 282486713 6.600000e-41 180.0
59 TraesCS5A01G211700 chrUn 82.488 217 26 9 2991 3204 307153120 307152913 6.600000e-41 180.0
60 TraesCS5A01G211700 chr2D 81.106 217 15 9 2980 3193 448194462 448194269 5.180000e-32 150.0
61 TraesCS5A01G211700 chr2D 94.048 84 5 0 592 675 625437210 625437293 2.430000e-25 128.0
62 TraesCS5A01G211700 chr2D 95.062 81 3 1 594 674 400515746 400515825 8.730000e-25 126.0
63 TraesCS5A01G211700 chr4D 74.569 232 37 12 2970 3193 5519176 5519393 1.920000e-11 82.4
64 TraesCS5A01G211700 chr1B 90.909 55 4 1 3140 3193 389215452 389215398 1.150000e-08 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G211700 chr5A 426930071 426938351 8280 False 7318.0000 9108 100.000000 1 8281 2 chr5A.!!$F6 8280
1 TraesCS5A01G211700 chr5A 623555300 623556655 1355 False 2307.0000 2307 97.287000 1156 2519 1 chr5A.!!$F5 1363
2 TraesCS5A01G211700 chr5A 78265444 78266804 1360 False 2217.0000 2217 95.982000 1156 2524 1 chr5A.!!$F1 1368
3 TraesCS5A01G211700 chr5A 78324276 78325615 1339 False 2071.0000 2071 94.263000 1156 2532 1 chr5A.!!$F2 1376
4 TraesCS5A01G211700 chr5B 382890443 382897992 7549 True 1498.7800 3557 93.254600 2531 8281 5 chr5B.!!$R3 5750
5 TraesCS5A01G211700 chr5B 382906219 382908053 1834 True 371.0000 654 81.434333 4 738 3 chr5B.!!$R4 734
6 TraesCS5A01G211700 chr5D 329779780 329790274 10494 True 1075.8875 3341 92.294750 8 8281 8 chr5D.!!$R1 8273
7 TraesCS5A01G211700 chr1A 244509852 244511220 1368 False 2270.0000 2270 96.514000 1156 2532 1 chr1A.!!$F2 1376
8 TraesCS5A01G211700 chr1A 587387090 587388435 1345 False 2211.0000 2211 96.233000 1156 2509 1 chr1A.!!$F4 1353
9 TraesCS5A01G211700 chr1A 97645988 97647356 1368 False 2174.0000 2174 95.280000 1156 2531 1 chr1A.!!$F1 1375
10 TraesCS5A01G211700 chr1A 452018765 452019289 524 True 664.0000 664 90.286000 1159 1658 1 chr1A.!!$R2 499
11 TraesCS5A01G211700 chr2B 596912304 596913690 1386 False 2182.0000 2182 95.197000 1156 2532 1 chr2B.!!$F1 1376
12 TraesCS5A01G211700 chr3D 281330343 281331189 846 False 1238.0000 1238 92.907000 1659 2518 1 chr3D.!!$F1 859
13 TraesCS5A01G211700 chr4A 599904143 599905005 862 False 1227.0000 1227 92.229000 1659 2532 1 chr4A.!!$F2 873
14 TraesCS5A01G211700 chr2A 426710974 426711837 863 True 1157.0000 1157 90.643000 1658 2544 1 chr2A.!!$R1 886
15 TraesCS5A01G211700 chr2A 734548630 734549219 589 True 822.0000 822 91.681000 1933 2532 1 chr2A.!!$R3 599
16 TraesCS5A01G211700 chr7D 403215354 403215952 598 False 856.0000 856 92.308000 1659 2268 1 chr7D.!!$F1 609
17 TraesCS5A01G211700 chr1D 351245770 351246294 524 True 669.0000 669 90.476000 1159 1658 1 chr1D.!!$R1 499

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
751 3241 0.036732 TTTCAGATTCCTGCGTGGCT 59.963 50.000 0.00 0.00 40.20 4.75 F
886 3376 0.179134 CCGCGTCCTCTACTTCCTTG 60.179 60.000 4.92 0.00 0.00 3.61 F
1408 4065 0.254178 AATCGCTGGCCAGAATCTGT 59.746 50.000 37.21 12.43 0.00 3.41 F
2278 6171 2.685017 AGCGCACTCCATCCTCCA 60.685 61.111 11.47 0.00 0.00 3.86 F
4034 8105 0.109132 GCAACGGATTTCTGCCTTGG 60.109 55.000 0.00 0.00 0.00 3.61 F
4081 8152 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.000 0.00 0.00 0.00 2.69 F
4090 8161 0.107831 CACGGGTTCAAGTCCTGGAA 59.892 55.000 0.00 0.00 35.79 3.53 F
4137 8208 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.000 0.00 0.00 0.00 4.51 F
4253 8324 0.320771 GGTTGACGTGGACTCATGCT 60.321 55.000 0.00 0.00 33.32 3.79 F
5315 9415 0.326595 TGCTCGGTGGCAGGATTAAA 59.673 50.000 0.00 0.00 37.29 1.52 F
5880 11782 0.392327 GCAAGTGCTCCTTCCTCCTC 60.392 60.000 0.00 0.00 38.21 3.71 F
5885 11787 0.556258 TGCTCCTTCCTCCTCGGATA 59.444 55.000 0.00 0.00 42.70 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2635 6687 0.109153 ACAGACAAGCATGCCAGTCA 59.891 50.000 30.23 0.00 33.56 3.41 R
2847 6907 6.187682 CAACCAGGGAAACTCCTTTGTATAT 58.812 40.000 0.00 0.00 36.57 0.86 R
3242 7307 2.223363 ACACGAGATCTGTATGTCTGCG 60.223 50.000 0.00 0.00 0.00 5.18 R
4051 8122 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85 R
5296 9396 0.326595 TTTAATCCTGCCACCGAGCA 59.673 50.000 0.00 0.00 41.46 4.26 R
5856 11758 0.548510 GGAAGGAGCACTTGCCCTAT 59.451 55.000 10.53 3.65 41.23 2.57 R
5885 11787 2.391130 TTGGCCACAACAGGAGGGT 61.391 57.895 3.88 0.00 0.00 4.34 R
6008 11910 5.412904 GCCCTAAATGCTACATAGATTCCAC 59.587 44.000 0.00 0.00 0.00 4.02 R
6169 12071 4.394795 CAGGCGTGTTCGAGAAAATAAAG 58.605 43.478 0.00 0.00 39.71 1.85 R
6751 12653 2.601504 CGATGCAGAATCAAATGAGGCG 60.602 50.000 0.00 0.00 34.68 5.52 R
7268 13175 3.248602 CAGTGCTTAGTCAGTGTGGTTTC 59.751 47.826 0.00 0.00 33.78 2.78 R
7850 14205 3.309682 CGGTTATGTGTGGCTCTGTTATG 59.690 47.826 0.00 0.00 0.00 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 2.803203 CCTGCATGTGAGGGAATGG 58.197 57.895 5.26 0.00 0.00 3.16
120 121 1.389609 CCTGCATGTGAGGGAATGGC 61.390 60.000 5.26 0.00 0.00 4.40
121 122 0.681887 CTGCATGTGAGGGAATGGCA 60.682 55.000 0.00 0.00 0.00 4.92
122 123 0.966875 TGCATGTGAGGGAATGGCAC 60.967 55.000 0.00 0.00 0.00 5.01
123 124 1.669999 GCATGTGAGGGAATGGCACC 61.670 60.000 0.00 0.00 0.00 5.01
124 125 1.077501 ATGTGAGGGAATGGCACCG 60.078 57.895 0.00 0.00 0.00 4.94
170 171 2.413837 AGTCAGAAACGGAAATGGACG 58.586 47.619 0.00 0.00 0.00 4.79
171 172 1.463444 GTCAGAAACGGAAATGGACGG 59.537 52.381 0.00 0.00 0.00 4.79
176 177 2.046314 CGGAAATGGACGGGTGCT 60.046 61.111 0.00 0.00 0.00 4.40
177 178 2.398554 CGGAAATGGACGGGTGCTG 61.399 63.158 0.00 0.00 0.00 4.41
178 179 2.700773 GGAAATGGACGGGTGCTGC 61.701 63.158 0.00 0.00 0.00 5.25
179 180 1.675641 GAAATGGACGGGTGCTGCT 60.676 57.895 0.00 0.00 0.00 4.24
180 181 1.648467 GAAATGGACGGGTGCTGCTC 61.648 60.000 0.00 0.00 0.00 4.26
181 182 2.129555 AAATGGACGGGTGCTGCTCT 62.130 55.000 0.00 0.00 0.00 4.09
203 204 1.139256 CTCTGCTGCTGATGGAGTGAT 59.861 52.381 9.72 0.00 33.91 3.06
206 207 0.818445 GCTGCTGATGGAGTGATGGG 60.818 60.000 0.00 0.00 33.91 4.00
207 208 0.545171 CTGCTGATGGAGTGATGGGT 59.455 55.000 0.00 0.00 0.00 4.51
208 209 0.253894 TGCTGATGGAGTGATGGGTG 59.746 55.000 0.00 0.00 0.00 4.61
212 213 3.424703 CTGATGGAGTGATGGGTGTTTT 58.575 45.455 0.00 0.00 0.00 2.43
214 215 1.327303 TGGAGTGATGGGTGTTTTGC 58.673 50.000 0.00 0.00 0.00 3.68
215 216 1.133513 TGGAGTGATGGGTGTTTTGCT 60.134 47.619 0.00 0.00 0.00 3.91
216 217 1.963515 GGAGTGATGGGTGTTTTGCTT 59.036 47.619 0.00 0.00 0.00 3.91
217 218 2.365293 GGAGTGATGGGTGTTTTGCTTT 59.635 45.455 0.00 0.00 0.00 3.51
218 219 3.572255 GGAGTGATGGGTGTTTTGCTTTA 59.428 43.478 0.00 0.00 0.00 1.85
219 220 4.321230 GGAGTGATGGGTGTTTTGCTTTAG 60.321 45.833 0.00 0.00 0.00 1.85
220 221 4.215109 AGTGATGGGTGTTTTGCTTTAGT 58.785 39.130 0.00 0.00 0.00 2.24
221 222 4.278419 AGTGATGGGTGTTTTGCTTTAGTC 59.722 41.667 0.00 0.00 0.00 2.59
268 269 1.328680 AGCAATTGATGATCACGCGAC 59.671 47.619 15.93 1.38 0.00 5.19
304 305 2.163815 GCGCTGGTAGAACTGTCTAGAA 59.836 50.000 0.00 0.00 37.02 2.10
308 309 5.565045 CGCTGGTAGAACTGTCTAGAAAAGT 60.565 44.000 0.00 0.00 37.02 2.66
310 311 6.146347 GCTGGTAGAACTGTCTAGAAAAGTTG 59.854 42.308 21.10 10.51 37.02 3.16
322 323 3.217626 AGAAAAGTTGGAGGAACAGCTG 58.782 45.455 13.48 13.48 36.98 4.24
324 325 0.886490 AAGTTGGAGGAACAGCTGCG 60.886 55.000 15.27 0.00 36.98 5.18
325 326 1.598130 GTTGGAGGAACAGCTGCGT 60.598 57.895 15.27 0.85 34.35 5.24
327 328 2.038814 TTGGAGGAACAGCTGCGTGA 62.039 55.000 15.27 0.00 0.00 4.35
328 329 1.739562 GGAGGAACAGCTGCGTGAG 60.740 63.158 15.27 0.00 0.00 3.51
332 333 1.301716 GAACAGCTGCGTGAGGGAA 60.302 57.895 15.27 0.00 0.00 3.97
333 334 1.294659 GAACAGCTGCGTGAGGGAAG 61.295 60.000 15.27 0.00 0.00 3.46
334 335 2.435586 CAGCTGCGTGAGGGAAGG 60.436 66.667 0.00 0.00 0.00 3.46
335 336 3.710722 AGCTGCGTGAGGGAAGGG 61.711 66.667 0.00 0.00 0.00 3.95
336 337 4.785453 GCTGCGTGAGGGAAGGGG 62.785 72.222 0.00 0.00 0.00 4.79
337 338 3.003173 CTGCGTGAGGGAAGGGGA 61.003 66.667 0.00 0.00 0.00 4.81
338 339 2.528127 TGCGTGAGGGAAGGGGAA 60.528 61.111 0.00 0.00 0.00 3.97
339 340 2.124507 CTGCGTGAGGGAAGGGGAAA 62.125 60.000 0.00 0.00 0.00 3.13
340 341 1.303282 GCGTGAGGGAAGGGGAAAT 59.697 57.895 0.00 0.00 0.00 2.17
341 342 0.544697 GCGTGAGGGAAGGGGAAATA 59.455 55.000 0.00 0.00 0.00 1.40
343 344 1.838077 CGTGAGGGAAGGGGAAATACT 59.162 52.381 0.00 0.00 0.00 2.12
344 345 2.158943 CGTGAGGGAAGGGGAAATACTC 60.159 54.545 0.00 0.00 0.00 2.59
355 356 3.281727 GGAAATACTCCATGCAGGACA 57.718 47.619 0.00 0.00 43.07 4.02
356 357 3.209410 GGAAATACTCCATGCAGGACAG 58.791 50.000 0.00 0.00 43.07 3.51
357 358 2.338577 AATACTCCATGCAGGACAGC 57.661 50.000 0.00 0.00 43.07 4.40
358 359 6.974647 GGAAATACTCCATGCAGGACAGCA 62.975 50.000 0.00 0.00 43.07 4.41
364 365 2.203832 TGCAGGACAGCAGGAGGA 60.204 61.111 0.00 0.00 40.11 3.71
365 366 2.288778 TGCAGGACAGCAGGAGGAG 61.289 63.158 0.00 0.00 40.11 3.69
366 367 2.583520 CAGGACAGCAGGAGGAGC 59.416 66.667 0.00 0.00 0.00 4.70
367 368 2.686835 AGGACAGCAGGAGGAGCC 60.687 66.667 0.00 0.00 0.00 4.70
376 377 4.803908 GGAGGAGCCTTTGCGGGG 62.804 72.222 0.00 0.00 44.33 5.73
379 380 3.723922 GGAGCCTTTGCGGGGGTA 61.724 66.667 0.00 0.00 44.33 3.69
381 382 3.699134 GAGCCTTTGCGGGGGTAGG 62.699 68.421 0.00 0.00 44.33 3.18
391 392 0.252197 CGGGGGTAGGAAGAAACAGG 59.748 60.000 0.00 0.00 0.00 4.00
392 393 1.369403 GGGGGTAGGAAGAAACAGGT 58.631 55.000 0.00 0.00 0.00 4.00
393 394 1.004394 GGGGGTAGGAAGAAACAGGTG 59.996 57.143 0.00 0.00 0.00 4.00
396 397 2.615747 GGGTAGGAAGAAACAGGTGCTC 60.616 54.545 0.00 0.00 0.00 4.26
415 416 3.283259 TCTGCGAACCAGAGATAGAGA 57.717 47.619 0.00 0.00 45.44 3.10
419 420 2.609244 GCGAACCAGAGATAGAGATGGC 60.609 54.545 0.00 0.00 36.21 4.40
420 421 2.625314 CGAACCAGAGATAGAGATGGCA 59.375 50.000 0.00 0.00 36.21 4.92
432 587 1.876156 GAGATGGCATTGGTCGAATCC 59.124 52.381 0.00 0.00 0.00 3.01
436 591 1.714899 GGCATTGGTCGAATCCACGG 61.715 60.000 0.00 0.00 37.20 4.94
437 592 1.024579 GCATTGGTCGAATCCACGGT 61.025 55.000 0.00 0.00 37.20 4.83
438 593 1.006832 CATTGGTCGAATCCACGGTC 58.993 55.000 0.00 0.00 37.20 4.79
439 594 0.611200 ATTGGTCGAATCCACGGTCA 59.389 50.000 0.00 0.00 37.20 4.02
440 595 0.611200 TTGGTCGAATCCACGGTCAT 59.389 50.000 0.00 0.00 37.20 3.06
443 598 2.432874 TGGTCGAATCCACGGTCATATT 59.567 45.455 0.00 0.00 31.96 1.28
444 599 3.118555 TGGTCGAATCCACGGTCATATTT 60.119 43.478 0.00 0.00 31.96 1.40
446 601 5.221561 TGGTCGAATCCACGGTCATATTTAT 60.222 40.000 0.00 0.00 31.96 1.40
447 602 5.347907 GGTCGAATCCACGGTCATATTTATC 59.652 44.000 0.00 0.00 0.00 1.75
448 603 6.157211 GTCGAATCCACGGTCATATTTATCT 58.843 40.000 0.00 0.00 0.00 1.98
461 656 7.256691 GGTCATATTTATCTTCCTCCTTGCCTA 60.257 40.741 0.00 0.00 0.00 3.93
464 659 4.755266 TTATCTTCCTCCTTGCCTACAC 57.245 45.455 0.00 0.00 0.00 2.90
467 662 2.979678 TCTTCCTCCTTGCCTACACTTT 59.020 45.455 0.00 0.00 0.00 2.66
488 683 4.705337 TTGTTTTACCACACGCTCTTTT 57.295 36.364 0.00 0.00 0.00 2.27
496 691 0.304705 ACACGCTCTTTTTCTGCACG 59.695 50.000 0.00 0.00 0.00 5.34
497 692 0.581529 CACGCTCTTTTTCTGCACGA 59.418 50.000 0.00 0.00 0.00 4.35
506 701 4.690748 TCTTTTTCTGCACGAGTTATCAGG 59.309 41.667 0.00 0.00 0.00 3.86
515 710 2.271800 CGAGTTATCAGGTGTTGCTCC 58.728 52.381 0.00 0.00 0.00 4.70
523 718 2.172505 TCAGGTGTTGCTCCTTTGAAGA 59.827 45.455 0.00 0.00 32.37 2.87
530 725 3.719268 TGCTCCTTTGAAGATGGCTAA 57.281 42.857 0.00 0.00 0.00 3.09
532 727 4.603131 TGCTCCTTTGAAGATGGCTAATT 58.397 39.130 0.00 0.00 0.00 1.40
533 728 5.018809 TGCTCCTTTGAAGATGGCTAATTT 58.981 37.500 0.00 0.00 0.00 1.82
540 738 3.379372 TGAAGATGGCTAATTTCTGCAGC 59.621 43.478 9.47 0.00 34.48 5.25
545 743 1.063174 GGCTAATTTCTGCAGCAGTCG 59.937 52.381 22.10 6.64 37.02 4.18
551 749 2.168326 TTCTGCAGCAGTCGAAATGA 57.832 45.000 22.10 0.00 32.61 2.57
553 751 2.493035 TCTGCAGCAGTCGAAATGAAA 58.507 42.857 22.10 0.00 32.61 2.69
555 753 1.946081 TGCAGCAGTCGAAATGAAACA 59.054 42.857 0.00 0.00 0.00 2.83
556 754 2.553602 TGCAGCAGTCGAAATGAAACAT 59.446 40.909 0.00 0.00 0.00 2.71
558 756 4.215185 TGCAGCAGTCGAAATGAAACATAA 59.785 37.500 0.00 0.00 0.00 1.90
559 757 5.106197 TGCAGCAGTCGAAATGAAACATAAT 60.106 36.000 0.00 0.00 0.00 1.28
560 758 5.453587 GCAGCAGTCGAAATGAAACATAATC 59.546 40.000 3.17 0.00 0.00 1.75
561 759 6.676456 GCAGCAGTCGAAATGAAACATAATCT 60.676 38.462 3.17 0.00 0.00 2.40
562 760 7.246311 CAGCAGTCGAAATGAAACATAATCTT 58.754 34.615 3.17 0.00 0.00 2.40
563 761 7.752239 CAGCAGTCGAAATGAAACATAATCTTT 59.248 33.333 3.17 0.00 0.00 2.52
564 762 7.965107 AGCAGTCGAAATGAAACATAATCTTTC 59.035 33.333 3.17 0.00 0.00 2.62
566 764 9.270576 CAGTCGAAATGAAACATAATCTTTCAG 57.729 33.333 0.00 0.00 40.18 3.02
567 765 9.003658 AGTCGAAATGAAACATAATCTTTCAGT 57.996 29.630 0.00 0.00 40.18 3.41
568 766 9.612620 GTCGAAATGAAACATAATCTTTCAGTT 57.387 29.630 6.34 6.34 44.40 3.16
569 767 9.611284 TCGAAATGAAACATAATCTTTCAGTTG 57.389 29.630 10.33 5.00 42.76 3.16
589 3079 2.165641 TGTTAGGTCTCGCATTCGTCAT 59.834 45.455 0.00 0.00 36.96 3.06
592 3082 1.066303 AGGTCTCGCATTCGTCATCTC 59.934 52.381 0.00 0.00 36.96 2.75
667 3157 1.595382 GATTCCCCGCGTCTCCATG 60.595 63.158 4.92 0.00 0.00 3.66
670 3160 2.046314 CCCCGCGTCTCCATGTTT 60.046 61.111 4.92 0.00 0.00 2.83
671 3161 1.674322 CCCCGCGTCTCCATGTTTT 60.674 57.895 4.92 0.00 0.00 2.43
690 3180 4.527509 TTTTTCTGTGTGCCTTTTGTCA 57.472 36.364 0.00 0.00 0.00 3.58
691 3181 4.734398 TTTTCTGTGTGCCTTTTGTCAT 57.266 36.364 0.00 0.00 0.00 3.06
692 3182 4.734398 TTTCTGTGTGCCTTTTGTCATT 57.266 36.364 0.00 0.00 0.00 2.57
693 3183 5.843673 TTTCTGTGTGCCTTTTGTCATTA 57.156 34.783 0.00 0.00 0.00 1.90
697 3187 6.815089 TCTGTGTGCCTTTTGTCATTATTTT 58.185 32.000 0.00 0.00 0.00 1.82
723 3213 7.925703 TCCTGAAATTAGATCGACGTATTTC 57.074 36.000 9.66 9.66 35.65 2.17
724 3214 7.485810 TCCTGAAATTAGATCGACGTATTTCA 58.514 34.615 15.74 15.74 38.94 2.69
730 3220 6.628919 TTAGATCGACGTATTTCAGGATCA 57.371 37.500 0.00 0.00 34.27 2.92
735 3225 5.100259 TCGACGTATTTCAGGATCAGTTTC 58.900 41.667 0.00 0.00 0.00 2.78
736 3226 4.862574 CGACGTATTTCAGGATCAGTTTCA 59.137 41.667 0.00 0.00 0.00 2.69
737 3227 5.004821 CGACGTATTTCAGGATCAGTTTCAG 59.995 44.000 0.00 0.00 0.00 3.02
738 3228 6.037786 ACGTATTTCAGGATCAGTTTCAGA 57.962 37.500 0.00 0.00 0.00 3.27
739 3229 6.644347 ACGTATTTCAGGATCAGTTTCAGAT 58.356 36.000 0.00 0.00 0.00 2.90
740 3230 7.106239 ACGTATTTCAGGATCAGTTTCAGATT 58.894 34.615 0.00 0.00 0.00 2.40
741 3231 7.278868 ACGTATTTCAGGATCAGTTTCAGATTC 59.721 37.037 0.00 0.00 0.00 2.52
742 3232 7.254590 CGTATTTCAGGATCAGTTTCAGATTCC 60.255 40.741 0.00 0.00 0.00 3.01
743 3233 5.768980 TTCAGGATCAGTTTCAGATTCCT 57.231 39.130 0.00 0.00 0.00 3.36
744 3234 5.095145 TCAGGATCAGTTTCAGATTCCTG 57.905 43.478 9.90 9.90 39.49 3.86
745 3235 3.626670 CAGGATCAGTTTCAGATTCCTGC 59.373 47.826 4.02 0.00 40.20 4.85
746 3236 2.611292 GGATCAGTTTCAGATTCCTGCG 59.389 50.000 0.00 0.00 40.20 5.18
747 3237 2.839486 TCAGTTTCAGATTCCTGCGT 57.161 45.000 0.00 0.00 40.20 5.24
749 3239 1.466167 CAGTTTCAGATTCCTGCGTGG 59.534 52.381 0.00 0.00 40.20 4.94
750 3240 0.169009 GTTTCAGATTCCTGCGTGGC 59.831 55.000 0.00 0.00 40.20 5.01
751 3241 0.036732 TTTCAGATTCCTGCGTGGCT 59.963 50.000 0.00 0.00 40.20 4.75
752 3242 0.036732 TTCAGATTCCTGCGTGGCTT 59.963 50.000 0.00 0.00 40.20 4.35
754 3244 0.883833 CAGATTCCTGCGTGGCTTTT 59.116 50.000 0.00 0.00 33.07 2.27
755 3245 1.270550 CAGATTCCTGCGTGGCTTTTT 59.729 47.619 0.00 0.00 33.07 1.94
784 3274 9.923143 TTTATCAAGAGTAATATGTATGGGTCG 57.077 33.333 0.00 0.00 0.00 4.79
820 3310 1.798813 GGCCCAACTATAAGATTCGCG 59.201 52.381 0.00 0.00 0.00 5.87
821 3311 2.547218 GGCCCAACTATAAGATTCGCGA 60.547 50.000 3.71 3.71 0.00 5.87
822 3312 2.475487 GCCCAACTATAAGATTCGCGAC 59.525 50.000 9.15 0.00 0.00 5.19
823 3313 3.057734 CCCAACTATAAGATTCGCGACC 58.942 50.000 9.15 3.47 0.00 4.79
824 3314 2.724690 CCAACTATAAGATTCGCGACCG 59.275 50.000 9.15 0.00 0.00 4.79
825 3315 3.369385 CAACTATAAGATTCGCGACCGT 58.631 45.455 9.15 4.70 35.54 4.83
826 3316 4.530388 CAACTATAAGATTCGCGACCGTA 58.470 43.478 9.15 7.07 35.54 4.02
828 3318 4.967437 ACTATAAGATTCGCGACCGTATC 58.033 43.478 9.15 9.63 40.29 2.24
831 3321 2.865343 AGATTCGCGACCGTATCTTT 57.135 45.000 9.15 0.00 45.43 2.52
832 3322 3.976793 AGATTCGCGACCGTATCTTTA 57.023 42.857 9.15 0.00 45.43 1.85
833 3323 4.500603 AGATTCGCGACCGTATCTTTAT 57.499 40.909 9.15 0.00 45.43 1.40
849 3339 3.640029 TCTTTATAGTTGGGCTACCCTCG 59.360 47.826 3.93 0.00 45.70 4.63
873 3363 4.736896 AGTTTCTCGGCCCGCGTC 62.737 66.667 4.92 0.00 0.00 5.19
886 3376 0.179134 CCGCGTCCTCTACTTCCTTG 60.179 60.000 4.92 0.00 0.00 3.61
929 3419 2.123251 TCCTCCGCTGATCCTCCC 60.123 66.667 0.00 0.00 0.00 4.30
930 3420 2.444706 CCTCCGCTGATCCTCCCA 60.445 66.667 0.00 0.00 0.00 4.37
931 3421 2.066393 CCTCCGCTGATCCTCCCAA 61.066 63.158 0.00 0.00 0.00 4.12
932 3422 1.445095 CTCCGCTGATCCTCCCAAG 59.555 63.158 0.00 0.00 0.00 3.61
933 3423 1.306141 TCCGCTGATCCTCCCAAGT 60.306 57.895 0.00 0.00 0.00 3.16
934 3424 1.144936 CCGCTGATCCTCCCAAGTC 59.855 63.158 0.00 0.00 0.00 3.01
935 3425 1.144936 CGCTGATCCTCCCAAGTCC 59.855 63.158 0.00 0.00 0.00 3.85
1008 3498 2.456119 GCCGGTGAAGATGCTGTCG 61.456 63.158 1.90 0.00 0.00 4.35
1023 3513 2.128507 GTCGAGGATCTCCCGCCTT 61.129 63.158 0.00 0.00 40.87 4.35
1071 3561 0.710588 TAGGTGAGCTTCTCCTCCCA 59.289 55.000 8.24 0.00 39.41 4.37
1072 3562 0.907230 AGGTGAGCTTCTCCTCCCAC 60.907 60.000 0.00 0.00 35.63 4.61
1138 3628 2.591133 CGGCGTTGTTTTATTTGGAGG 58.409 47.619 0.00 0.00 0.00 4.30
1152 3642 1.776662 TGGAGGATGTCTCGGTTAGG 58.223 55.000 0.00 0.00 43.34 2.69
1154 3644 2.091278 TGGAGGATGTCTCGGTTAGGAT 60.091 50.000 0.00 0.00 43.34 3.24
1157 3647 4.587684 GGAGGATGTCTCGGTTAGGATTAA 59.412 45.833 0.00 0.00 43.34 1.40
1408 4065 0.254178 AATCGCTGGCCAGAATCTGT 59.746 50.000 37.21 12.43 0.00 3.41
2278 6171 2.685017 AGCGCACTCCATCCTCCA 60.685 61.111 11.47 0.00 0.00 3.86
2398 6310 7.404671 AATGCCTATAGGGTTTTGTTTGTAG 57.595 36.000 20.58 0.00 37.43 2.74
2847 6907 3.147553 TGCCTACATTTACTGCCAACA 57.852 42.857 0.00 0.00 0.00 3.33
2947 7007 3.093814 TCGAGCAATCCTAACTGTACCA 58.906 45.455 0.00 0.00 0.00 3.25
2977 7041 3.492313 CAGAACTTGTTAATGCTTCGGC 58.508 45.455 0.00 0.00 42.19 5.54
3087 7151 9.958285 CGTATTGAATAGATTGATTTGGATACG 57.042 33.333 0.00 0.00 42.51 3.06
3242 7307 9.745880 ATCAGATATTGATGTTTGAAAAGATGC 57.254 29.630 0.00 0.00 44.84 3.91
3248 7313 2.998772 TGTTTGAAAAGATGCGCAGAC 58.001 42.857 18.32 12.89 0.00 3.51
3699 7770 3.711190 TCTAATGGCTCATTGGCTCTGTA 59.289 43.478 9.79 0.00 42.34 2.74
3803 7874 1.218316 GTTGGAGCACTAGGACGGG 59.782 63.158 0.00 0.00 0.00 5.28
3898 7969 6.818142 ACCAATTTAAGCTATGCATGGAAAAC 59.182 34.615 15.09 0.00 0.00 2.43
3965 8036 8.677300 TGAATTAAGCCTTCATAGTGATGTTTC 58.323 33.333 0.00 0.00 34.41 2.78
4029 8100 2.368655 ATTTGGCAACGGATTTCTGC 57.631 45.000 0.00 0.00 42.51 4.26
4033 8104 3.406682 GCAACGGATTTCTGCCTTG 57.593 52.632 0.00 0.00 0.00 3.61
4034 8105 0.109132 GCAACGGATTTCTGCCTTGG 60.109 55.000 0.00 0.00 0.00 3.61
4035 8106 0.109132 CAACGGATTTCTGCCTTGGC 60.109 55.000 4.43 4.43 0.00 4.52
4036 8107 1.586154 AACGGATTTCTGCCTTGGCG 61.586 55.000 7.18 2.49 0.00 5.69
4037 8108 2.491621 GGATTTCTGCCTTGGCGC 59.508 61.111 0.00 0.00 0.00 6.53
4038 8109 2.342650 GGATTTCTGCCTTGGCGCA 61.343 57.895 10.83 0.00 37.19 6.09
4044 8115 3.947459 TGCCTTGGCGCAGTGGTA 61.947 61.111 10.83 3.89 33.92 3.25
4045 8116 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
4046 8117 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
4047 8118 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
4048 8119 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
4049 8120 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
4050 8121 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
4055 8126 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
4056 8127 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
4057 8128 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
4058 8129 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
4059 8130 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
4060 8131 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
4061 8132 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
4062 8133 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
4063 8134 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
4064 8135 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
4065 8136 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
4066 8137 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
4067 8138 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
4068 8139 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
4069 8140 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
4079 8150 4.617875 CCATGAGGTCACGGGTTC 57.382 61.111 0.00 0.00 0.00 3.62
4080 8151 1.676968 CCATGAGGTCACGGGTTCA 59.323 57.895 0.00 0.00 0.00 3.18
4081 8152 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.000 0.00 0.00 0.00 2.69
4082 8153 1.442769 CATGAGGTCACGGGTTCAAG 58.557 55.000 0.00 0.00 0.00 3.02
4083 8154 1.056660 ATGAGGTCACGGGTTCAAGT 58.943 50.000 0.00 0.00 0.00 3.16
4084 8155 0.391597 TGAGGTCACGGGTTCAAGTC 59.608 55.000 0.00 0.00 0.00 3.01
4085 8156 0.320508 GAGGTCACGGGTTCAAGTCC 60.321 60.000 0.00 0.00 0.00 3.85
4086 8157 0.763223 AGGTCACGGGTTCAAGTCCT 60.763 55.000 0.00 0.00 0.00 3.85
4087 8158 0.602905 GGTCACGGGTTCAAGTCCTG 60.603 60.000 0.00 0.00 37.36 3.86
4088 8159 0.602905 GTCACGGGTTCAAGTCCTGG 60.603 60.000 0.00 0.00 35.79 4.45
4089 8160 0.761323 TCACGGGTTCAAGTCCTGGA 60.761 55.000 0.00 0.00 35.79 3.86
4090 8161 0.107831 CACGGGTTCAAGTCCTGGAA 59.892 55.000 0.00 0.00 35.79 3.53
4091 8162 0.841289 ACGGGTTCAAGTCCTGGAAA 59.159 50.000 0.00 0.00 35.79 3.13
4092 8163 1.235724 CGGGTTCAAGTCCTGGAAAC 58.764 55.000 0.00 0.00 0.00 2.78
4093 8164 1.476110 CGGGTTCAAGTCCTGGAAACA 60.476 52.381 0.00 0.00 32.36 2.83
4107 8178 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
4108 8179 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
4109 8180 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
4110 8181 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
4111 8182 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
4112 8183 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
4113 8184 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
4114 8185 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
4115 8186 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
4116 8187 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
4117 8188 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
4118 8189 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
4119 8190 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
4120 8191 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
4121 8192 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
4122 8193 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
4123 8194 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
4124 8195 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
4125 8196 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
4126 8197 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
4127 8198 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
4128 8199 0.248289 GTAGGGAAAGGCTGCGTACA 59.752 55.000 0.00 0.00 36.89 2.90
4129 8200 0.978151 TAGGGAAAGGCTGCGTACAA 59.022 50.000 0.00 0.00 0.00 2.41
4130 8201 0.328258 AGGGAAAGGCTGCGTACAAT 59.672 50.000 0.00 0.00 0.00 2.71
4131 8202 1.557832 AGGGAAAGGCTGCGTACAATA 59.442 47.619 0.00 0.00 0.00 1.90
4132 8203 1.940613 GGGAAAGGCTGCGTACAATAG 59.059 52.381 0.00 0.00 0.00 1.73
4133 8204 2.419574 GGGAAAGGCTGCGTACAATAGA 60.420 50.000 0.00 0.00 0.00 1.98
4134 8205 2.608090 GGAAAGGCTGCGTACAATAGAC 59.392 50.000 0.00 0.00 0.00 2.59
4135 8206 2.311124 AAGGCTGCGTACAATAGACC 57.689 50.000 0.00 0.00 0.00 3.85
4136 8207 0.464452 AGGCTGCGTACAATAGACCC 59.536 55.000 0.00 0.00 0.00 4.46
4137 8208 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.000 0.00 0.00 0.00 4.51
4138 8209 1.406341 GGCTGCGTACAATAGACCCAA 60.406 52.381 0.00 0.00 0.00 4.12
4139 8210 2.352388 GCTGCGTACAATAGACCCAAA 58.648 47.619 0.00 0.00 0.00 3.28
4140 8211 2.351726 GCTGCGTACAATAGACCCAAAG 59.648 50.000 0.00 0.00 0.00 2.77
4141 8212 3.596214 CTGCGTACAATAGACCCAAAGT 58.404 45.455 0.00 0.00 0.00 2.66
4142 8213 3.331150 TGCGTACAATAGACCCAAAGTG 58.669 45.455 0.00 0.00 0.00 3.16
4143 8214 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
4144 8215 3.867216 GCGTACAATAGACCCAAAGTGGT 60.867 47.826 0.00 0.00 42.79 4.16
4149 8220 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
4150 8221 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
4151 8222 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
4152 8223 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
4153 8224 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
4154 8225 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
4155 8226 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
4156 8227 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
4157 8228 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
4158 8229 4.257810 TGGTCGGACCCTTCCCCA 62.258 66.667 23.81 0.69 38.99 4.96
4159 8230 3.400054 GGTCGGACCCTTCCCCAG 61.400 72.222 16.55 0.00 38.99 4.45
4160 8231 2.284405 GTCGGACCCTTCCCCAGA 60.284 66.667 0.00 0.00 38.99 3.86
4161 8232 2.284405 TCGGACCCTTCCCCAGAC 60.284 66.667 0.00 0.00 38.99 3.51
4162 8233 3.400054 CGGACCCTTCCCCAGACC 61.400 72.222 0.00 0.00 38.99 3.85
4163 8234 3.015753 GGACCCTTCCCCAGACCC 61.016 72.222 0.00 0.00 35.57 4.46
4164 8235 2.125225 GACCCTTCCCCAGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
4165 8236 2.204151 ACCCTTCCCCAGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
4166 8237 3.732849 CCCTTCCCCAGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
4167 8238 4.101448 CCTTCCCCAGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
4168 8239 4.785453 CTTCCCCAGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
4189 8260 3.506096 CGGGAGCTGCATGCACTG 61.506 66.667 18.46 9.68 45.94 3.66
4190 8261 3.138798 GGGAGCTGCATGCACTGG 61.139 66.667 18.46 8.85 45.94 4.00
4191 8262 3.138798 GGAGCTGCATGCACTGGG 61.139 66.667 18.46 8.43 45.94 4.45
4192 8263 3.138798 GAGCTGCATGCACTGGGG 61.139 66.667 18.46 8.01 45.94 4.96
4195 8266 3.449227 CTGCATGCACTGGGGCTG 61.449 66.667 18.46 0.00 34.04 4.85
4202 8273 2.203684 CACTGGGGCTGCCCTTTT 60.204 61.111 34.99 17.53 44.66 2.27
4203 8274 1.838396 CACTGGGGCTGCCCTTTTT 60.838 57.895 34.99 15.74 44.66 1.94
4240 8311 1.388547 TCACTTTGTGGCAGGTTGAC 58.611 50.000 0.00 0.00 33.87 3.18
4253 8324 0.320771 GGTTGACGTGGACTCATGCT 60.321 55.000 0.00 0.00 33.32 3.79
4280 8351 3.011144 TCCCTTTGGAGGCATGACATTTA 59.989 43.478 0.00 0.00 42.09 1.40
4382 8453 2.098280 TCTCTGCGAGACAGCTGATTAC 59.902 50.000 23.35 8.67 46.76 1.89
4396 8467 7.533426 ACAGCTGATTACAGAAGCAAATAAAG 58.467 34.615 23.35 0.00 46.03 1.85
4398 8469 5.745769 GCTGATTACAGAAGCAAATAAAGCC 59.254 40.000 0.00 0.00 46.03 4.35
4413 8484 3.451894 GCCAGTGAAATGCCCCCG 61.452 66.667 0.00 0.00 0.00 5.73
4484 8558 1.065401 GCTAAATGCGCCAGTATTGCA 59.935 47.619 4.18 0.00 43.67 4.08
4491 8565 1.133025 GCGCCAGTATTGCAACAGAAT 59.867 47.619 0.00 0.00 0.00 2.40
4492 8566 2.354510 GCGCCAGTATTGCAACAGAATA 59.645 45.455 0.00 0.00 0.00 1.75
4494 8568 4.498009 GCGCCAGTATTGCAACAGAATAAT 60.498 41.667 0.00 0.00 0.00 1.28
4495 8569 4.971830 CGCCAGTATTGCAACAGAATAATG 59.028 41.667 0.00 0.00 33.28 1.90
4666 8755 7.592938 TGCTCCATTTCAAGTAAAACATACAG 58.407 34.615 0.00 0.00 0.00 2.74
4701 8798 5.220662 GGAGGAAAACACGATGTACATGATG 60.221 44.000 14.43 13.17 0.00 3.07
4708 8805 2.938451 ACGATGTACATGATGCAACAGG 59.062 45.455 14.43 7.11 0.00 4.00
4771 8871 1.946984 AGGGAAACGGTAGATCCACA 58.053 50.000 9.04 0.00 34.82 4.17
4774 8874 2.093128 GGGAAACGGTAGATCCACACAT 60.093 50.000 9.04 0.00 34.82 3.21
4812 8912 8.603304 TGAATAGTAAAGAGGCCTTTAAGTTCT 58.397 33.333 6.77 2.94 43.98 3.01
4858 8958 7.754851 TTGGAAATTCCTGGAAGTACTTAAC 57.245 36.000 15.34 5.48 37.46 2.01
4862 8962 6.449830 AATTCCTGGAAGTACTTAACTGGT 57.550 37.500 23.35 11.37 38.88 4.00
4924 9024 0.702316 GGTTTTTGGGCCCCTCTCTA 59.298 55.000 22.27 0.00 0.00 2.43
5311 9411 4.101448 GGTGCTCGGTGGCAGGAT 62.101 66.667 0.00 0.00 43.25 3.24
5312 9412 2.045926 GTGCTCGGTGGCAGGATT 60.046 61.111 0.00 0.00 43.25 3.01
5313 9413 1.220749 GTGCTCGGTGGCAGGATTA 59.779 57.895 0.00 0.00 43.25 1.75
5314 9414 0.392461 GTGCTCGGTGGCAGGATTAA 60.392 55.000 0.00 0.00 43.25 1.40
5315 9415 0.326595 TGCTCGGTGGCAGGATTAAA 59.673 50.000 0.00 0.00 37.29 1.52
5316 9416 1.017387 GCTCGGTGGCAGGATTAAAG 58.983 55.000 0.00 0.00 0.00 1.85
5317 9417 1.017387 CTCGGTGGCAGGATTAAAGC 58.983 55.000 0.00 0.00 0.00 3.51
5318 9418 0.742990 TCGGTGGCAGGATTAAAGCG 60.743 55.000 0.00 0.00 0.00 4.68
5319 9419 0.742990 CGGTGGCAGGATTAAAGCGA 60.743 55.000 0.00 0.00 33.87 4.93
5320 9420 1.459450 GGTGGCAGGATTAAAGCGAA 58.541 50.000 0.00 0.00 0.00 4.70
5321 9421 1.401905 GGTGGCAGGATTAAAGCGAAG 59.598 52.381 0.00 0.00 0.00 3.79
5322 9422 2.356135 GTGGCAGGATTAAAGCGAAGA 58.644 47.619 0.00 0.00 0.00 2.87
5351 9536 1.474077 GTGGAATGTTGGAGGATGTGC 59.526 52.381 0.00 0.00 0.00 4.57
5354 9539 0.409092 AATGTTGGAGGATGTGCCCA 59.591 50.000 0.00 0.00 37.37 5.36
5418 9603 5.310857 AGATTGGTAAGAAAAGGTCCAGACT 59.689 40.000 0.00 0.00 0.00 3.24
5435 9620 5.188948 TCCAGACTTTATGTAGCCTGCTTAA 59.811 40.000 0.00 0.00 0.00 1.85
5465 9650 3.798202 CCTTGAAGGGACTAGTATGTGC 58.202 50.000 2.50 0.00 38.49 4.57
5472 9657 1.619332 GGACTAGTATGTGCCCCTAGC 59.381 57.143 0.00 0.00 44.14 3.42
5534 9719 6.869315 TCTTGTTTGATTGGTACGAAATGA 57.131 33.333 0.00 0.00 0.00 2.57
5547 9732 7.600065 TGGTACGAAATGAGCTAGGATTATAC 58.400 38.462 0.00 0.00 0.00 1.47
5551 9736 6.015010 ACGAAATGAGCTAGGATTATACAGCT 60.015 38.462 1.95 1.95 46.71 4.24
5612 9797 4.360951 ACCGTTAAGAGGTTTGAATCCA 57.639 40.909 0.00 0.00 39.29 3.41
5631 9816 5.514500 TCCAAACTTAAAGATAGCTGGGT 57.486 39.130 0.00 0.00 0.00 4.51
5640 9825 8.282256 ACTTAAAGATAGCTGGGTAATCCAAAT 58.718 33.333 0.00 0.00 46.51 2.32
5715 9900 5.708736 TGGGAGAATATCTTGCTTGGTTA 57.291 39.130 0.00 0.00 0.00 2.85
5743 9928 6.507568 AGAATAGGGCTAGGCATTATAGAGT 58.492 40.000 19.14 0.00 0.00 3.24
5806 9991 9.495572 GGTACTCTTAAGAATTCAATATCCCAG 57.504 37.037 8.44 0.00 0.00 4.45
5880 11782 0.392327 GCAAGTGCTCCTTCCTCCTC 60.392 60.000 0.00 0.00 38.21 3.71
5885 11787 0.556258 TGCTCCTTCCTCCTCGGATA 59.444 55.000 0.00 0.00 42.70 2.59
6002 11904 9.625747 TCATGCAGGTGTCTATTTCATATTTTA 57.374 29.630 0.00 0.00 0.00 1.52
6118 12020 3.624861 AGTTCTGCCTCTATTTTGATGCG 59.375 43.478 0.00 0.00 31.68 4.73
6165 12067 9.062524 TCTGCTTCACTTTACAGCTTATTTAAA 57.937 29.630 0.00 0.00 34.42 1.52
6166 12068 9.334693 CTGCTTCACTTTACAGCTTATTTAAAG 57.665 33.333 10.35 10.35 38.33 1.85
6242 12144 8.587952 TTGTATTTTAAAGCCTTTTCTTCTGC 57.412 30.769 0.00 0.00 0.00 4.26
6287 12189 9.289303 GTTGAATATGTTACATGTTCCATTGAC 57.711 33.333 24.72 14.74 0.00 3.18
6440 12342 7.977853 GCAATCAGTATCAATGACTGGAATTTT 59.022 33.333 3.15 0.00 43.76 1.82
6665 12567 6.122964 GCTTCCTTGGACTTAATATCACCTT 58.877 40.000 0.00 0.00 0.00 3.50
6751 12653 8.668510 ATCATGATACCTTTCTGTCATTGTAC 57.331 34.615 6.36 0.00 0.00 2.90
6757 12659 3.325870 CTTTCTGTCATTGTACGCCTCA 58.674 45.455 0.00 0.00 0.00 3.86
6772 12674 2.601504 CGCCTCATTTGATTCTGCATCG 60.602 50.000 0.00 0.00 34.08 3.84
6807 12710 7.525688 TCGTTTAAATTTGTTGCATGTTGAA 57.474 28.000 0.00 0.00 0.00 2.69
7002 12906 5.591877 AGTGCAGTTTGATGAGAAAGTTCTT 59.408 36.000 0.00 0.00 37.73 2.52
7099 13003 3.439129 GGGCTTACAGAAACGTATGCTTT 59.561 43.478 0.00 0.00 40.53 3.51
7102 13006 5.342259 GGCTTACAGAAACGTATGCTTTTTG 59.658 40.000 0.00 0.00 40.53 2.44
7104 13008 6.129457 GCTTACAGAAACGTATGCTTTTTGTG 60.129 38.462 12.33 6.38 38.70 3.33
7106 13010 5.034152 ACAGAAACGTATGCTTTTTGTGTG 58.966 37.500 6.70 0.00 35.91 3.82
7300 13207 3.326588 TGACTAAGCACTGGGTATGTTGT 59.673 43.478 0.00 0.00 0.00 3.32
7576 13646 5.971763 ACTGTAGATCTTCCTTGTAAGCTG 58.028 41.667 0.00 0.00 0.00 4.24
7679 14011 8.989653 TTTTTCCTTTTGTTACCTTGTAGTTG 57.010 30.769 0.00 0.00 0.00 3.16
7681 14013 8.804912 TTTCCTTTTGTTACCTTGTAGTTGTA 57.195 30.769 0.00 0.00 0.00 2.41
7684 14016 8.048514 TCCTTTTGTTACCTTGTAGTTGTAGTT 58.951 33.333 0.00 0.00 0.00 2.24
7753 14085 7.678947 ATCAATCATACTTAGCAATGCTACC 57.321 36.000 15.31 0.00 41.12 3.18
7792 14124 6.655930 ACTATGAAGCCCGGAAAAACTATAA 58.344 36.000 0.73 0.00 0.00 0.98
7850 14205 7.740519 AACATTTAGAAAATATCGCTTGCAC 57.259 32.000 0.00 0.00 0.00 4.57
7871 14226 4.094887 CACATAACAGAGCCACACATAACC 59.905 45.833 0.00 0.00 0.00 2.85
8030 14387 6.154877 TGACCAATTTACTAATCACGGTAGGA 59.845 38.462 0.00 0.00 0.00 2.94
8056 14413 7.101652 AGAGCTTCTAACTTATCGTCAATGA 57.898 36.000 0.00 0.00 0.00 2.57
8073 14430 6.697019 CGTCAATGACAAAGTTCCAAGAAAAT 59.303 34.615 14.24 0.00 32.09 1.82
8116 14479 1.079127 CGGCGAAGATGAGGGTGTT 60.079 57.895 0.00 0.00 0.00 3.32
8117 14480 0.174845 CGGCGAAGATGAGGGTGTTA 59.825 55.000 0.00 0.00 0.00 2.41
8118 14481 1.653151 GGCGAAGATGAGGGTGTTAC 58.347 55.000 0.00 0.00 0.00 2.50
8171 14535 5.475719 TGGAGTTACCTAAACACATCGAAG 58.524 41.667 0.00 0.00 40.83 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.589196 GAGAAACGCCGATCGGAGG 60.589 63.158 37.64 27.88 43.86 4.30
6 7 1.939785 CGAGAAACGCCGATCGGAG 60.940 63.158 37.64 35.01 43.86 4.63
10 11 0.458025 AGGTTCGAGAAACGCCGATC 60.458 55.000 0.00 0.00 42.26 3.69
120 121 4.873129 CGGACAGATCGCCCGGTG 62.873 72.222 13.32 0.00 39.59 4.94
139 140 6.897259 TCCGTTTCTGACTAATTAAATCGG 57.103 37.500 8.89 8.89 35.35 4.18
170 171 2.436292 CAGAGCAGAGCAGCACCC 60.436 66.667 0.00 0.00 36.85 4.61
171 172 3.126225 GCAGAGCAGAGCAGCACC 61.126 66.667 0.00 0.00 36.85 5.01
176 177 1.900545 ATCAGCAGCAGAGCAGAGCA 61.901 55.000 0.00 0.00 33.43 4.26
177 178 1.153329 ATCAGCAGCAGAGCAGAGC 60.153 57.895 0.00 0.00 33.43 4.09
178 179 0.812014 CCATCAGCAGCAGAGCAGAG 60.812 60.000 0.00 0.00 33.43 3.35
179 180 1.221021 CCATCAGCAGCAGAGCAGA 59.779 57.895 0.00 0.00 36.85 4.26
180 181 0.812014 CTCCATCAGCAGCAGAGCAG 60.812 60.000 0.00 0.00 36.85 4.24
181 182 1.221021 CTCCATCAGCAGCAGAGCA 59.779 57.895 0.00 0.00 36.85 4.26
203 204 3.882888 CTGAGACTAAAGCAAAACACCCA 59.117 43.478 0.00 0.00 0.00 4.51
206 207 4.023963 GGTCCTGAGACTAAAGCAAAACAC 60.024 45.833 0.00 0.00 43.05 3.32
207 208 4.134563 GGTCCTGAGACTAAAGCAAAACA 58.865 43.478 0.00 0.00 43.05 2.83
208 209 4.134563 TGGTCCTGAGACTAAAGCAAAAC 58.865 43.478 0.00 0.00 43.05 2.43
216 217 2.231478 CGAGCTTTGGTCCTGAGACTAA 59.769 50.000 0.00 0.00 41.25 2.24
217 218 1.819288 CGAGCTTTGGTCCTGAGACTA 59.181 52.381 0.00 0.00 43.05 2.59
218 219 0.605589 CGAGCTTTGGTCCTGAGACT 59.394 55.000 0.00 0.00 43.05 3.24
219 220 0.603569 TCGAGCTTTGGTCCTGAGAC 59.396 55.000 0.00 0.00 42.73 3.36
220 221 1.478510 GATCGAGCTTTGGTCCTGAGA 59.521 52.381 0.00 0.00 0.00 3.27
221 222 1.480137 AGATCGAGCTTTGGTCCTGAG 59.520 52.381 0.00 0.00 0.00 3.35
281 282 1.448013 GACAGTTCTACCAGCGCCC 60.448 63.158 2.29 0.00 0.00 6.13
288 289 6.756221 TCCAACTTTTCTAGACAGTTCTACC 58.244 40.000 11.94 0.00 32.75 3.18
304 305 1.322442 GCAGCTGTTCCTCCAACTTT 58.678 50.000 16.64 0.00 35.79 2.66
308 309 1.597854 CACGCAGCTGTTCCTCCAA 60.598 57.895 16.64 0.00 0.00 3.53
310 311 1.739562 CTCACGCAGCTGTTCCTCC 60.740 63.158 16.64 0.00 0.00 4.30
322 323 0.544697 TATTTCCCCTTCCCTCACGC 59.455 55.000 0.00 0.00 0.00 5.34
324 325 2.172930 GGAGTATTTCCCCTTCCCTCAC 59.827 54.545 0.00 0.00 40.37 3.51
325 326 2.226039 TGGAGTATTTCCCCTTCCCTCA 60.226 50.000 0.00 0.00 46.19 3.86
327 328 2.680439 TGGAGTATTTCCCCTTCCCT 57.320 50.000 0.00 0.00 46.19 4.20
328 329 2.753168 GCATGGAGTATTTCCCCTTCCC 60.753 54.545 0.00 0.00 46.19 3.97
332 333 1.496429 CCTGCATGGAGTATTTCCCCT 59.504 52.381 13.65 0.00 46.19 4.79
333 334 1.494721 TCCTGCATGGAGTATTTCCCC 59.505 52.381 13.65 0.00 46.19 4.81
343 344 1.907222 CTCCTGCTGTCCTGCATGGA 61.907 60.000 12.85 12.85 42.48 3.41
344 345 1.451567 CTCCTGCTGTCCTGCATGG 60.452 63.158 0.00 4.38 42.48 3.66
346 347 1.614525 TCCTCCTGCTGTCCTGCAT 60.615 57.895 0.00 0.00 42.48 3.96
347 348 2.203832 TCCTCCTGCTGTCCTGCA 60.204 61.111 0.00 0.00 41.05 4.41
348 349 2.583520 CTCCTCCTGCTGTCCTGC 59.416 66.667 0.00 0.00 0.00 4.85
349 350 2.583520 GCTCCTCCTGCTGTCCTG 59.416 66.667 0.00 0.00 0.00 3.86
350 351 2.686835 GGCTCCTCCTGCTGTCCT 60.687 66.667 0.00 0.00 0.00 3.85
351 352 1.846712 AAAGGCTCCTCCTGCTGTCC 61.847 60.000 0.00 0.00 46.94 4.02
352 353 0.676151 CAAAGGCTCCTCCTGCTGTC 60.676 60.000 0.00 0.00 46.94 3.51
353 354 1.377994 CAAAGGCTCCTCCTGCTGT 59.622 57.895 0.00 0.00 46.94 4.40
354 355 2.045131 GCAAAGGCTCCTCCTGCTG 61.045 63.158 12.95 0.00 46.94 4.41
355 356 2.354343 GCAAAGGCTCCTCCTGCT 59.646 61.111 12.95 0.00 46.94 4.24
356 357 3.130160 CGCAAAGGCTCCTCCTGC 61.130 66.667 11.07 11.07 46.94 4.85
357 358 2.437359 CCGCAAAGGCTCCTCCTG 60.437 66.667 0.00 0.00 46.94 3.86
359 360 4.803908 CCCCGCAAAGGCTCCTCC 62.804 72.222 0.00 0.00 39.21 4.30
360 361 4.803908 CCCCCGCAAAGGCTCCTC 62.804 72.222 0.00 0.00 39.21 3.71
362 363 3.699134 CTACCCCCGCAAAGGCTCC 62.699 68.421 0.00 0.00 39.21 4.70
363 364 2.124695 CTACCCCCGCAAAGGCTC 60.125 66.667 0.00 0.00 39.21 4.70
364 365 3.728373 CCTACCCCCGCAAAGGCT 61.728 66.667 0.00 0.00 39.21 4.58
365 366 3.276642 TTCCTACCCCCGCAAAGGC 62.277 63.158 0.00 0.00 39.21 4.35
366 367 1.077716 CTTCCTACCCCCGCAAAGG 60.078 63.158 0.00 0.00 40.63 3.11
367 368 0.326927 TTCTTCCTACCCCCGCAAAG 59.673 55.000 0.00 0.00 0.00 2.77
368 369 0.772384 TTTCTTCCTACCCCCGCAAA 59.228 50.000 0.00 0.00 0.00 3.68
369 370 0.037160 GTTTCTTCCTACCCCCGCAA 59.963 55.000 0.00 0.00 0.00 4.85
370 371 1.128809 TGTTTCTTCCTACCCCCGCA 61.129 55.000 0.00 0.00 0.00 5.69
372 373 0.252197 CCTGTTTCTTCCTACCCCCG 59.748 60.000 0.00 0.00 0.00 5.73
374 375 1.613520 GCACCTGTTTCTTCCTACCCC 60.614 57.143 0.00 0.00 0.00 4.95
376 377 2.303311 AGAGCACCTGTTTCTTCCTACC 59.697 50.000 0.00 0.00 0.00 3.18
378 379 2.289694 GCAGAGCACCTGTTTCTTCCTA 60.290 50.000 7.76 0.00 44.71 2.94
379 380 1.544314 GCAGAGCACCTGTTTCTTCCT 60.544 52.381 7.76 0.00 44.71 3.36
381 382 0.514691 CGCAGAGCACCTGTTTCTTC 59.485 55.000 7.76 0.00 44.71 2.87
391 392 0.108424 ATCTCTGGTTCGCAGAGCAC 60.108 55.000 12.21 0.00 44.22 4.40
392 393 1.406898 CTATCTCTGGTTCGCAGAGCA 59.593 52.381 12.21 4.25 44.22 4.26
393 394 1.678627 TCTATCTCTGGTTCGCAGAGC 59.321 52.381 12.21 0.00 44.22 4.09
396 397 3.305267 CCATCTCTATCTCTGGTTCGCAG 60.305 52.174 0.00 0.00 0.00 5.18
399 400 2.625314 TGCCATCTCTATCTCTGGTTCG 59.375 50.000 0.00 0.00 0.00 3.95
401 402 4.202440 CCAATGCCATCTCTATCTCTGGTT 60.202 45.833 0.00 0.00 0.00 3.67
404 405 4.567971 GACCAATGCCATCTCTATCTCTG 58.432 47.826 0.00 0.00 0.00 3.35
411 412 2.486191 GGATTCGACCAATGCCATCTCT 60.486 50.000 0.00 0.00 0.00 3.10
412 413 1.876156 GGATTCGACCAATGCCATCTC 59.124 52.381 0.00 0.00 0.00 2.75
413 414 1.212688 TGGATTCGACCAATGCCATCT 59.787 47.619 0.00 0.00 36.96 2.90
414 415 1.334869 GTGGATTCGACCAATGCCATC 59.665 52.381 0.00 0.00 41.87 3.51
415 416 1.392589 GTGGATTCGACCAATGCCAT 58.607 50.000 0.00 0.00 41.87 4.40
419 420 1.006832 GACCGTGGATTCGACCAATG 58.993 55.000 0.00 0.00 41.87 2.82
420 421 0.611200 TGACCGTGGATTCGACCAAT 59.389 50.000 0.00 0.00 41.87 3.16
432 587 6.102897 AGGAGGAAGATAAATATGACCGTG 57.897 41.667 0.00 0.00 0.00 4.94
436 591 6.538263 AGGCAAGGAGGAAGATAAATATGAC 58.462 40.000 0.00 0.00 0.00 3.06
437 592 6.770286 AGGCAAGGAGGAAGATAAATATGA 57.230 37.500 0.00 0.00 0.00 2.15
438 593 7.389053 GTGTAGGCAAGGAGGAAGATAAATATG 59.611 40.741 0.00 0.00 0.00 1.78
439 594 7.293535 AGTGTAGGCAAGGAGGAAGATAAATAT 59.706 37.037 0.00 0.00 0.00 1.28
440 595 6.615726 AGTGTAGGCAAGGAGGAAGATAAATA 59.384 38.462 0.00 0.00 0.00 1.40
443 598 4.362677 AGTGTAGGCAAGGAGGAAGATAA 58.637 43.478 0.00 0.00 0.00 1.75
444 599 3.995636 AGTGTAGGCAAGGAGGAAGATA 58.004 45.455 0.00 0.00 0.00 1.98
446 601 2.327325 AGTGTAGGCAAGGAGGAAGA 57.673 50.000 0.00 0.00 0.00 2.87
447 602 3.425162 AAAGTGTAGGCAAGGAGGAAG 57.575 47.619 0.00 0.00 0.00 3.46
448 603 3.117663 ACAAAAGTGTAGGCAAGGAGGAA 60.118 43.478 0.00 0.00 35.72 3.36
461 656 3.191791 AGCGTGTGGTAAAACAAAAGTGT 59.808 39.130 0.00 0.00 40.75 3.55
464 659 4.287238 AGAGCGTGTGGTAAAACAAAAG 57.713 40.909 0.00 0.00 0.00 2.27
467 662 4.705337 AAAAGAGCGTGTGGTAAAACAA 57.295 36.364 0.00 0.00 0.00 2.83
488 683 2.299013 ACACCTGATAACTCGTGCAGAA 59.701 45.455 0.00 0.00 0.00 3.02
496 691 3.618690 AGGAGCAACACCTGATAACTC 57.381 47.619 0.00 0.00 36.30 3.01
497 692 4.074970 CAAAGGAGCAACACCTGATAACT 58.925 43.478 0.00 0.00 37.85 2.24
506 701 2.352127 GCCATCTTCAAAGGAGCAACAC 60.352 50.000 0.00 0.00 0.00 3.32
515 710 5.957798 TGCAGAAATTAGCCATCTTCAAAG 58.042 37.500 0.00 0.00 0.00 2.77
523 718 2.686915 GACTGCTGCAGAAATTAGCCAT 59.313 45.455 34.28 9.20 36.64 4.40
530 725 3.076621 TCATTTCGACTGCTGCAGAAAT 58.923 40.909 34.28 24.68 42.08 2.17
532 727 2.168326 TCATTTCGACTGCTGCAGAA 57.832 45.000 34.28 18.91 35.18 3.02
533 728 2.168326 TTCATTTCGACTGCTGCAGA 57.832 45.000 34.28 13.42 35.18 4.26
540 738 9.270576 CTGAAAGATTATGTTTCATTTCGACTG 57.729 33.333 16.08 1.25 41.80 3.51
551 749 9.574516 AGACCTAACAACTGAAAGATTATGTTT 57.425 29.630 0.00 0.00 37.43 2.83
553 751 7.545965 CGAGACCTAACAACTGAAAGATTATGT 59.454 37.037 0.00 0.00 37.43 2.29
555 753 6.535508 GCGAGACCTAACAACTGAAAGATTAT 59.464 38.462 0.00 0.00 37.43 1.28
556 754 5.867716 GCGAGACCTAACAACTGAAAGATTA 59.132 40.000 0.00 0.00 37.43 1.75
558 756 4.246458 GCGAGACCTAACAACTGAAAGAT 58.754 43.478 0.00 0.00 37.43 2.40
559 757 3.069016 TGCGAGACCTAACAACTGAAAGA 59.931 43.478 0.00 0.00 37.43 2.52
560 758 3.390135 TGCGAGACCTAACAACTGAAAG 58.610 45.455 0.00 0.00 42.29 2.62
561 759 3.462483 TGCGAGACCTAACAACTGAAA 57.538 42.857 0.00 0.00 0.00 2.69
562 760 3.678056 ATGCGAGACCTAACAACTGAA 57.322 42.857 0.00 0.00 0.00 3.02
563 761 3.585862 GAATGCGAGACCTAACAACTGA 58.414 45.455 0.00 0.00 0.00 3.41
564 762 2.345641 CGAATGCGAGACCTAACAACTG 59.654 50.000 0.00 0.00 40.82 3.16
566 764 2.334838 ACGAATGCGAGACCTAACAAC 58.665 47.619 0.00 0.00 41.64 3.32
567 765 2.029739 TGACGAATGCGAGACCTAACAA 60.030 45.455 0.00 0.00 41.64 2.83
568 766 1.542472 TGACGAATGCGAGACCTAACA 59.458 47.619 0.00 0.00 41.64 2.41
569 767 2.273370 TGACGAATGCGAGACCTAAC 57.727 50.000 0.00 0.00 41.64 2.34
574 3064 1.116436 CGAGATGACGAATGCGAGAC 58.884 55.000 0.00 0.00 41.64 3.36
589 3079 0.471191 TATGAGCTACGTCCCCGAGA 59.529 55.000 0.00 0.00 37.88 4.04
592 3082 0.243907 CCATATGAGCTACGTCCCCG 59.756 60.000 3.65 0.00 40.83 5.73
670 3160 4.734398 ATGACAAAAGGCACACAGAAAA 57.266 36.364 0.00 0.00 0.00 2.29
671 3161 4.734398 AATGACAAAAGGCACACAGAAA 57.266 36.364 0.00 0.00 0.00 2.52
674 3164 7.481275 AAAAATAATGACAAAAGGCACACAG 57.519 32.000 0.00 0.00 0.00 3.66
697 3187 8.712285 AAATACGTCGATCTAATTTCAGGAAA 57.288 30.769 0.00 0.00 34.46 3.13
703 3193 7.925703 TCCTGAAATACGTCGATCTAATTTC 57.074 36.000 0.00 9.66 37.17 2.17
708 3198 5.763698 ACTGATCCTGAAATACGTCGATCTA 59.236 40.000 0.00 0.00 0.00 1.98
713 3203 4.862574 TGAAACTGATCCTGAAATACGTCG 59.137 41.667 0.00 0.00 0.00 5.12
715 3205 6.037786 TCTGAAACTGATCCTGAAATACGT 57.962 37.500 0.00 0.00 0.00 3.57
718 3208 7.772292 CAGGAATCTGAAACTGATCCTGAAATA 59.228 37.037 13.05 0.00 43.49 1.40
723 3213 3.626670 GCAGGAATCTGAAACTGATCCTG 59.373 47.826 13.82 13.82 43.49 3.86
724 3214 3.681034 CGCAGGAATCTGAAACTGATCCT 60.681 47.826 9.77 0.00 43.49 3.24
730 3220 1.813513 CCACGCAGGAATCTGAAACT 58.186 50.000 0.00 0.00 43.49 2.66
735 3225 0.883833 AAAAGCCACGCAGGAATCTG 59.116 50.000 0.00 0.00 43.64 2.90
736 3226 1.620822 AAAAAGCCACGCAGGAATCT 58.379 45.000 0.00 0.00 41.22 2.40
760 3250 8.873186 TCGACCCATACATATTACTCTTGATA 57.127 34.615 0.00 0.00 0.00 2.15
761 3251 7.776618 TCGACCCATACATATTACTCTTGAT 57.223 36.000 0.00 0.00 0.00 2.57
763 3253 9.574458 CTTATCGACCCATACATATTACTCTTG 57.426 37.037 0.00 0.00 0.00 3.02
765 3255 7.616150 AGCTTATCGACCCATACATATTACTCT 59.384 37.037 0.00 0.00 0.00 3.24
766 3256 7.702772 CAGCTTATCGACCCATACATATTACTC 59.297 40.741 0.00 0.00 0.00 2.59
767 3257 7.363880 CCAGCTTATCGACCCATACATATTACT 60.364 40.741 0.00 0.00 0.00 2.24
768 3258 6.757010 CCAGCTTATCGACCCATACATATTAC 59.243 42.308 0.00 0.00 0.00 1.89
769 3259 6.666113 TCCAGCTTATCGACCCATACATATTA 59.334 38.462 0.00 0.00 0.00 0.98
771 3261 5.023452 TCCAGCTTATCGACCCATACATAT 58.977 41.667 0.00 0.00 0.00 1.78
773 3263 3.239449 TCCAGCTTATCGACCCATACAT 58.761 45.455 0.00 0.00 0.00 2.29
774 3264 2.628178 CTCCAGCTTATCGACCCATACA 59.372 50.000 0.00 0.00 0.00 2.29
776 3266 3.238788 TCTCCAGCTTATCGACCCATA 57.761 47.619 0.00 0.00 0.00 2.74
777 3267 2.088104 TCTCCAGCTTATCGACCCAT 57.912 50.000 0.00 0.00 0.00 4.00
778 3268 1.860641 TTCTCCAGCTTATCGACCCA 58.139 50.000 0.00 0.00 0.00 4.51
779 3269 2.981859 TTTCTCCAGCTTATCGACCC 57.018 50.000 0.00 0.00 0.00 4.46
780 3270 3.134458 CCATTTCTCCAGCTTATCGACC 58.866 50.000 0.00 0.00 0.00 4.79
781 3271 2.545946 GCCATTTCTCCAGCTTATCGAC 59.454 50.000 0.00 0.00 0.00 4.20
782 3272 2.485479 GGCCATTTCTCCAGCTTATCGA 60.485 50.000 0.00 0.00 0.00 3.59
783 3273 1.876156 GGCCATTTCTCCAGCTTATCG 59.124 52.381 0.00 0.00 0.00 2.92
784 3274 2.234143 GGGCCATTTCTCCAGCTTATC 58.766 52.381 4.39 0.00 0.00 1.75
820 3310 5.211174 AGCCCAACTATAAAGATACGGTC 57.789 43.478 0.00 0.00 0.00 4.79
821 3311 5.011431 GGTAGCCCAACTATAAAGATACGGT 59.989 44.000 0.00 0.00 32.15 4.83
822 3312 5.476614 GGTAGCCCAACTATAAAGATACGG 58.523 45.833 0.00 0.00 32.15 4.02
823 3313 5.476614 GGGTAGCCCAACTATAAAGATACG 58.523 45.833 0.00 0.00 44.65 3.06
872 3362 2.231478 CGCTTGACAAGGAAGTAGAGGA 59.769 50.000 16.80 0.00 0.00 3.71
873 3363 2.231478 TCGCTTGACAAGGAAGTAGAGG 59.769 50.000 16.80 0.00 0.00 3.69
886 3376 1.627550 GGAGTTCGGCTTCGCTTGAC 61.628 60.000 0.00 0.00 0.00 3.18
903 3393 1.380515 CAGCGGAGGAGGAAGAGGA 60.381 63.158 0.00 0.00 0.00 3.71
929 3419 4.038080 GCGCGGGTTTGGGACTTG 62.038 66.667 8.83 0.00 0.00 3.16
990 3480 2.456119 CGACAGCATCTTCACCGGC 61.456 63.158 0.00 0.00 0.00 6.13
1008 3498 2.825264 CCAAGGCGGGAGATCCTC 59.175 66.667 0.00 0.00 35.95 3.71
1057 3547 1.334384 GGAGGTGGGAGGAGAAGCTC 61.334 65.000 0.00 0.00 37.64 4.09
1058 3548 1.306568 GGAGGTGGGAGGAGAAGCT 60.307 63.158 0.00 0.00 0.00 3.74
1138 3628 4.444720 CGCTTTAATCCTAACCGAGACATC 59.555 45.833 0.00 0.00 0.00 3.06
1152 3642 2.227865 TGGACAACAAGGCGCTTTAATC 59.772 45.455 7.64 1.53 0.00 1.75
1154 3644 1.606668 CTGGACAACAAGGCGCTTTAA 59.393 47.619 7.64 0.00 0.00 1.52
1157 3647 2.555547 GCTGGACAACAAGGCGCTT 61.556 57.895 7.64 0.00 0.00 4.68
1408 4065 0.606604 GCTCCAGTTACTCCGTTCCA 59.393 55.000 0.00 0.00 0.00 3.53
2628 6680 3.054878 CAAGCATGCCAGTCAAAAGAAC 58.945 45.455 15.66 0.00 0.00 3.01
2635 6687 0.109153 ACAGACAAGCATGCCAGTCA 59.891 50.000 30.23 0.00 33.56 3.41
2847 6907 6.187682 CAACCAGGGAAACTCCTTTGTATAT 58.812 40.000 0.00 0.00 36.57 0.86
2915 6975 2.359214 GGATTGCTCGAAGAAATTCCCC 59.641 50.000 0.00 0.00 34.09 4.81
2947 7007 6.209391 AGCATTAACAAGTTCTGCAGGTTAAT 59.791 34.615 22.13 22.13 42.30 1.40
3120 7184 5.740290 TTAAAGGTGGAGACTAGAAGGTG 57.260 43.478 0.00 0.00 0.00 4.00
3129 7193 3.557595 CGATGCAGATTAAAGGTGGAGAC 59.442 47.826 0.00 0.00 0.00 3.36
3225 7290 3.252944 TCTGCGCATCTTTTCAAACATCA 59.747 39.130 12.24 0.00 0.00 3.07
3242 7307 2.223363 ACACGAGATCTGTATGTCTGCG 60.223 50.000 0.00 0.00 0.00 5.18
3318 7383 9.581289 TTCCATCTTTGAACTAAGTTATTCCAA 57.419 29.630 0.00 0.00 0.00 3.53
3699 7770 7.891498 AAGTAAGGTTTATTGTGTTGGTCTT 57.109 32.000 0.00 0.00 0.00 3.01
3803 7874 9.021863 GCGTACTTATATTCATGTAATCCTAGC 57.978 37.037 0.00 0.00 0.00 3.42
3965 8036 1.560505 AATGGTTTAGCAGCAAGGGG 58.439 50.000 0.00 0.00 36.17 4.79
4029 8100 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
4030 8101 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
4031 8102 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
4032 8103 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
4033 8104 2.870372 CAGCTTTACCACTGCGCC 59.130 61.111 4.18 0.00 0.00 6.53
4037 8108 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
4038 8109 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
4039 8110 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
4040 8111 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
4041 8112 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
4042 8113 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
4043 8114 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
4044 8115 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
4045 8116 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
4046 8117 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
4047 8118 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
4048 8119 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
4049 8120 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
4050 8121 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
4051 8122 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
4052 8123 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
4063 8134 1.270839 ACTTGAACCCGTGACCTCATG 60.271 52.381 0.00 0.00 0.00 3.07
4064 8135 1.002087 GACTTGAACCCGTGACCTCAT 59.998 52.381 0.00 0.00 0.00 2.90
4065 8136 0.391597 GACTTGAACCCGTGACCTCA 59.608 55.000 0.00 0.00 0.00 3.86
4066 8137 0.320508 GGACTTGAACCCGTGACCTC 60.321 60.000 0.00 0.00 0.00 3.85
4067 8138 0.763223 AGGACTTGAACCCGTGACCT 60.763 55.000 0.00 0.00 0.00 3.85
4068 8139 0.602905 CAGGACTTGAACCCGTGACC 60.603 60.000 0.00 0.00 0.00 4.02
4069 8140 0.602905 CCAGGACTTGAACCCGTGAC 60.603 60.000 0.00 0.00 0.00 3.67
4070 8141 0.761323 TCCAGGACTTGAACCCGTGA 60.761 55.000 0.00 0.00 0.00 4.35
4071 8142 0.107831 TTCCAGGACTTGAACCCGTG 59.892 55.000 0.00 0.00 0.00 4.94
4072 8143 0.841289 TTTCCAGGACTTGAACCCGT 59.159 50.000 0.00 0.00 0.00 5.28
4073 8144 1.235724 GTTTCCAGGACTTGAACCCG 58.764 55.000 0.00 0.00 0.00 5.28
4074 8145 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
4075 8146 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
4076 8147 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
4077 8148 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
4078 8149 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
4079 8150 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
4080 8151 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
4081 8152 1.439543 AAGAGGCTGTTTCCAGGACT 58.560 50.000 0.00 0.00 39.22 3.85
4082 8153 2.038557 TGTAAGAGGCTGTTTCCAGGAC 59.961 50.000 0.90 0.00 39.22 3.85
4083 8154 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
4084 8155 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
4085 8156 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
4097 8168 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
4098 8169 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
4099 8170 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
4100 8171 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
4101 8172 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
4102 8173 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
4103 8174 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
4104 8175 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
4105 8176 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
4106 8177 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
4107 8178 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
4108 8179 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
4109 8180 0.248289 TGTACGCAGCCTTTCCCTAC 59.752 55.000 0.00 0.00 0.00 3.18
4110 8181 0.978151 TTGTACGCAGCCTTTCCCTA 59.022 50.000 0.00 0.00 0.00 3.53
4111 8182 0.328258 ATTGTACGCAGCCTTTCCCT 59.672 50.000 0.00 0.00 0.00 4.20
4112 8183 1.940613 CTATTGTACGCAGCCTTTCCC 59.059 52.381 0.00 0.00 0.00 3.97
4113 8184 2.608090 GTCTATTGTACGCAGCCTTTCC 59.392 50.000 0.00 0.00 0.00 3.13
4114 8185 2.608090 GGTCTATTGTACGCAGCCTTTC 59.392 50.000 0.00 0.00 0.00 2.62
4115 8186 2.629051 GGTCTATTGTACGCAGCCTTT 58.371 47.619 0.00 0.00 0.00 3.11
4116 8187 1.134491 GGGTCTATTGTACGCAGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
4117 8188 0.464452 GGGTCTATTGTACGCAGCCT 59.536 55.000 0.00 0.00 0.00 4.58
4118 8189 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.000 0.00 0.00 35.18 4.85
4119 8190 2.018542 TTGGGTCTATTGTACGCAGC 57.981 50.000 0.00 0.00 40.36 5.25
4120 8191 3.370978 CACTTTGGGTCTATTGTACGCAG 59.629 47.826 0.00 0.00 40.36 5.18
4121 8192 3.331150 CACTTTGGGTCTATTGTACGCA 58.669 45.455 0.00 0.00 37.94 5.24
4122 8193 2.676342 CCACTTTGGGTCTATTGTACGC 59.324 50.000 0.00 0.00 32.67 4.42
4123 8194 3.934068 ACCACTTTGGGTCTATTGTACG 58.066 45.455 0.00 0.00 43.37 3.67
4133 8204 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
4134 8205 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
4135 8206 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
4136 8207 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
4137 8208 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
4138 8209 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
4139 8210 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
4140 8211 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
4141 8212 4.257810 TGGGGAAGGGTCCGACCA 62.258 66.667 19.43 0.00 46.04 4.02
4142 8213 3.400054 CTGGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
4143 8214 2.284405 TCTGGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
4144 8215 2.284405 GTCTGGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
4145 8216 3.400054 GGTCTGGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
4146 8217 3.015753 GGGTCTGGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
4147 8218 2.125225 AGGGTCTGGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
4148 8219 2.204151 CAGGGTCTGGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
4149 8220 3.732849 GCAGGGTCTGGGGAAGGG 61.733 72.222 0.00 0.00 31.21 3.95
4150 8221 4.101448 CGCAGGGTCTGGGGAAGG 62.101 72.222 4.35 0.00 40.11 3.46
4151 8222 4.785453 GCGCAGGGTCTGGGGAAG 62.785 72.222 0.30 0.00 43.28 3.46
4167 8238 4.189188 CATGCAGCTCCCGCTTGC 62.189 66.667 0.00 0.00 46.47 4.01
4168 8239 4.189188 GCATGCAGCTCCCGCTTG 62.189 66.667 14.21 6.16 46.47 4.01
4169 8240 4.728110 TGCATGCAGCTCCCGCTT 62.728 61.111 18.46 0.00 46.47 4.68
4172 8243 3.506096 CAGTGCATGCAGCTCCCG 61.506 66.667 23.41 6.21 45.94 5.14
4173 8244 3.138798 CCAGTGCATGCAGCTCCC 61.139 66.667 23.41 9.09 45.94 4.30
4174 8245 3.138798 CCCAGTGCATGCAGCTCC 61.139 66.667 23.41 9.52 45.94 4.70
4175 8246 3.138798 CCCCAGTGCATGCAGCTC 61.139 66.667 23.41 9.94 45.94 4.09
4178 8249 3.449227 CAGCCCCAGTGCATGCAG 61.449 66.667 23.41 10.61 0.00 4.41
4204 8275 9.681692 CACAAAGTGAAATGATGACAGAAATAA 57.318 29.630 0.00 0.00 35.23 1.40
4205 8276 8.298854 CCACAAAGTGAAATGATGACAGAAATA 58.701 33.333 0.00 0.00 35.23 1.40
4206 8277 7.149973 CCACAAAGTGAAATGATGACAGAAAT 58.850 34.615 0.00 0.00 35.23 2.17
4207 8278 6.506147 CCACAAAGTGAAATGATGACAGAAA 58.494 36.000 0.00 0.00 35.23 2.52
4208 8279 5.507817 GCCACAAAGTGAAATGATGACAGAA 60.508 40.000 0.00 0.00 35.23 3.02
4209 8280 4.022935 GCCACAAAGTGAAATGATGACAGA 60.023 41.667 0.00 0.00 35.23 3.41
4210 8281 4.232221 GCCACAAAGTGAAATGATGACAG 58.768 43.478 0.00 0.00 35.23 3.51
4211 8282 3.635836 TGCCACAAAGTGAAATGATGACA 59.364 39.130 0.00 0.00 35.23 3.58
4212 8283 4.232221 CTGCCACAAAGTGAAATGATGAC 58.768 43.478 0.00 0.00 35.23 3.06
4215 8286 3.233507 ACCTGCCACAAAGTGAAATGAT 58.766 40.909 0.00 0.00 35.23 2.45
4240 8311 2.205074 GGATAACAGCATGAGTCCACG 58.795 52.381 0.00 0.00 39.69 4.94
4327 8398 3.449746 AGTGCAAAAGGGGCATAAGTA 57.550 42.857 0.00 0.00 44.11 2.24
4382 8453 4.771590 TCACTGGCTTTATTTGCTTCTG 57.228 40.909 0.00 0.00 0.00 3.02
4396 8467 2.830186 TACGGGGGCATTTCACTGGC 62.830 60.000 0.00 0.00 40.76 4.85
4398 8469 1.308998 GATACGGGGGCATTTCACTG 58.691 55.000 0.00 0.00 0.00 3.66
4476 8550 9.793252 GATTTGACATTATTCTGTTGCAATACT 57.207 29.630 0.59 0.00 0.00 2.12
4491 8565 9.517868 TGCCACATATGATATGATTTGACATTA 57.482 29.630 18.62 0.00 0.00 1.90
4492 8566 8.301720 GTGCCACATATGATATGATTTGACATT 58.698 33.333 18.62 0.00 0.00 2.71
4494 8568 6.771749 TGTGCCACATATGATATGATTTGACA 59.228 34.615 18.62 10.83 0.00 3.58
4495 8569 7.205737 TGTGCCACATATGATATGATTTGAC 57.794 36.000 18.62 8.76 0.00 3.18
4541 8630 2.637872 CCACTTTCCCTCCAGACAAGTA 59.362 50.000 0.00 0.00 0.00 2.24
4666 8755 4.511826 CGTGTTTTCCTCCCTATATTCTGC 59.488 45.833 0.00 0.00 0.00 4.26
4701 8798 1.081242 CGGACATGTTGCCTGTTGC 60.081 57.895 0.00 0.00 41.77 4.17
4708 8805 2.255252 GTGTGCCGGACATGTTGC 59.745 61.111 5.05 4.34 36.78 4.17
4753 8853 1.276989 TGTGTGGATCTACCGTTTCCC 59.723 52.381 6.77 0.00 42.61 3.97
4758 8858 3.973206 TCAAATGTGTGGATCTACCGT 57.027 42.857 6.77 0.00 42.61 4.83
4759 8859 5.818136 AATTCAAATGTGTGGATCTACCG 57.182 39.130 6.77 0.00 42.61 4.02
4858 8958 3.915437 GGTGGACAAATGTTACACCAG 57.085 47.619 24.42 0.00 46.45 4.00
4862 8962 5.001232 GCTTCTAGGTGGACAAATGTTACA 58.999 41.667 0.00 0.00 0.00 2.41
5294 9394 2.252072 TAATCCTGCCACCGAGCACC 62.252 60.000 0.00 0.00 38.00 5.01
5295 9395 0.392461 TTAATCCTGCCACCGAGCAC 60.392 55.000 0.00 0.00 38.00 4.40
5296 9396 0.326595 TTTAATCCTGCCACCGAGCA 59.673 50.000 0.00 0.00 41.46 4.26
5297 9397 1.017387 CTTTAATCCTGCCACCGAGC 58.983 55.000 0.00 0.00 0.00 5.03
5298 9398 1.017387 GCTTTAATCCTGCCACCGAG 58.983 55.000 0.00 0.00 0.00 4.63
5299 9399 0.742990 CGCTTTAATCCTGCCACCGA 60.743 55.000 0.00 0.00 0.00 4.69
5300 9400 0.742990 TCGCTTTAATCCTGCCACCG 60.743 55.000 0.00 0.00 0.00 4.94
5301 9401 1.401905 CTTCGCTTTAATCCTGCCACC 59.598 52.381 0.00 0.00 0.00 4.61
5302 9402 2.356135 TCTTCGCTTTAATCCTGCCAC 58.644 47.619 0.00 0.00 0.00 5.01
5303 9403 2.779755 TCTTCGCTTTAATCCTGCCA 57.220 45.000 0.00 0.00 0.00 4.92
5304 9404 5.948992 ATAATCTTCGCTTTAATCCTGCC 57.051 39.130 0.00 0.00 0.00 4.85
5305 9405 7.410942 CGACTATAATCTTCGCTTTAATCCTGC 60.411 40.741 0.00 0.00 0.00 4.85
5306 9406 7.595502 ACGACTATAATCTTCGCTTTAATCCTG 59.404 37.037 0.00 0.00 36.18 3.86
5307 9407 7.595502 CACGACTATAATCTTCGCTTTAATCCT 59.404 37.037 0.00 0.00 36.18 3.24
5308 9408 7.148787 CCACGACTATAATCTTCGCTTTAATCC 60.149 40.741 0.00 0.00 36.18 3.01
5309 9409 7.594015 TCCACGACTATAATCTTCGCTTTAATC 59.406 37.037 0.00 0.00 36.18 1.75
5310 9410 7.431249 TCCACGACTATAATCTTCGCTTTAAT 58.569 34.615 0.00 0.00 36.18 1.40
5311 9411 6.798482 TCCACGACTATAATCTTCGCTTTAA 58.202 36.000 0.00 0.00 36.18 1.52
5312 9412 6.381481 TCCACGACTATAATCTTCGCTTTA 57.619 37.500 0.00 0.00 36.18 1.85
5313 9413 5.258456 TCCACGACTATAATCTTCGCTTT 57.742 39.130 0.00 0.00 36.18 3.51
5314 9414 4.913335 TCCACGACTATAATCTTCGCTT 57.087 40.909 0.00 0.00 36.18 4.68
5315 9415 4.913335 TTCCACGACTATAATCTTCGCT 57.087 40.909 0.00 0.00 36.18 4.93
5316 9416 4.982916 ACATTCCACGACTATAATCTTCGC 59.017 41.667 0.00 0.00 36.18 4.70
5317 9417 6.074302 CCAACATTCCACGACTATAATCTTCG 60.074 42.308 0.00 0.00 38.73 3.79
5318 9418 6.984474 TCCAACATTCCACGACTATAATCTTC 59.016 38.462 0.00 0.00 0.00 2.87
5319 9419 6.884832 TCCAACATTCCACGACTATAATCTT 58.115 36.000 0.00 0.00 0.00 2.40
5320 9420 6.463049 CCTCCAACATTCCACGACTATAATCT 60.463 42.308 0.00 0.00 0.00 2.40
5321 9421 5.696724 CCTCCAACATTCCACGACTATAATC 59.303 44.000 0.00 0.00 0.00 1.75
5322 9422 5.365605 TCCTCCAACATTCCACGACTATAAT 59.634 40.000 0.00 0.00 0.00 1.28
5351 9536 2.983907 TATGCCACAAAATGCATGGG 57.016 45.000 0.00 0.00 46.99 4.00
5373 9558 3.270027 TGACAGTTCCTTCACAAGTGTG 58.730 45.455 5.02 5.02 46.91 3.82
5374 9559 3.197766 TCTGACAGTTCCTTCACAAGTGT 59.802 43.478 1.59 0.00 39.62 3.55
5418 9603 5.770663 TGGTGTTTTAAGCAGGCTACATAAA 59.229 36.000 0.00 0.00 0.00 1.40
5547 9732 1.197721 CTTGGGTTTGTAAGCGAGCTG 59.802 52.381 0.00 0.00 0.00 4.24
5551 9736 3.008157 TCCATACTTGGGTTTGTAAGCGA 59.992 43.478 0.00 0.00 43.81 4.93
5612 9797 7.639378 TGGATTACCCAGCTATCTTTAAGTTT 58.361 34.615 0.00 0.00 40.82 2.66
5640 9825 8.144478 CGGATAAGGATCTCAGTTATCTTTGAA 58.856 37.037 12.91 0.00 34.76 2.69
5715 9900 8.123130 TCTATAATGCCTAGCCCTATTCTTACT 58.877 37.037 0.00 0.00 0.00 2.24
5743 9928 3.370103 CCATCCTTAGGTTTGTAAGCCGA 60.370 47.826 0.00 0.00 34.07 5.54
5806 9991 4.342378 TGAGTGTCCCAGATATCTGTAAGC 59.658 45.833 27.03 16.01 42.27 3.09
5856 11758 0.548510 GGAAGGAGCACTTGCCCTAT 59.451 55.000 10.53 3.65 41.23 2.57
5885 11787 2.391130 TTGGCCACAACAGGAGGGT 61.391 57.895 3.88 0.00 0.00 4.34
5931 11833 8.576442 ACCAAAGGACAAAATATTACTCACAAG 58.424 33.333 0.00 0.00 0.00 3.16
6002 11904 5.830799 TGCTACATAGATTCCACATGGAT 57.169 39.130 0.34 0.00 44.98 3.41
6008 11910 5.412904 GCCCTAAATGCTACATAGATTCCAC 59.587 44.000 0.00 0.00 0.00 4.02
6014 11916 5.823861 TCATGCCCTAAATGCTACATAGA 57.176 39.130 0.00 0.00 0.00 1.98
6118 12020 6.294843 GCAGATAGACCTCATAAAGACCCTAC 60.295 46.154 0.00 0.00 0.00 3.18
6165 12067 5.333875 GGCGTGTTCGAGAAAATAAAGAACT 60.334 40.000 7.90 0.00 41.05 3.01
6166 12068 4.844522 GGCGTGTTCGAGAAAATAAAGAAC 59.155 41.667 0.28 0.28 40.90 3.01
6169 12071 4.394795 CAGGCGTGTTCGAGAAAATAAAG 58.605 43.478 0.00 0.00 39.71 1.85
6304 12206 8.434589 AAAGGTGATGGAATCCTAATTTCAAA 57.565 30.769 0.00 0.00 44.73 2.69
6310 12212 8.670521 AAAAGAAAAGGTGATGGAATCCTAAT 57.329 30.769 0.00 0.00 44.73 1.73
6324 12226 6.479990 GCAACAAATCAGCTAAAAGAAAAGGT 59.520 34.615 0.00 0.00 0.00 3.50
6440 12342 4.824479 TGTCACAGATATCCTGCAAAGA 57.176 40.909 0.00 0.00 46.81 2.52
6751 12653 2.601504 CGATGCAGAATCAAATGAGGCG 60.602 50.000 0.00 0.00 34.68 5.52
6757 12659 6.949352 ATTCTAACCGATGCAGAATCAAAT 57.051 33.333 0.00 0.00 34.67 2.32
6942 12846 7.974675 TCAACACACTGAAAACTTAGAAAGAG 58.025 34.615 0.00 0.00 0.00 2.85
7002 12906 8.565896 TTGTTATAGTAGTCTACGTCCTGAAA 57.434 34.615 4.34 0.00 0.00 2.69
7099 13003 5.629079 TGTACAATTCACACACACACAAA 57.371 34.783 0.00 0.00 0.00 2.83
7102 13006 6.529829 ACATTTTGTACAATTCACACACACAC 59.470 34.615 9.56 0.00 0.00 3.82
7104 13008 8.795786 ATACATTTTGTACAATTCACACACAC 57.204 30.769 9.56 0.00 35.42 3.82
7140 13047 5.529581 AAACAATGGGACCAAGTTAGTTG 57.470 39.130 11.35 5.95 35.71 3.16
7148 13055 4.941263 CGAGATCTAAAACAATGGGACCAA 59.059 41.667 0.00 0.00 0.00 3.67
7268 13175 3.248602 CAGTGCTTAGTCAGTGTGGTTTC 59.751 47.826 0.00 0.00 33.78 2.78
7546 13453 7.283625 ACAAGGAAGATCTACAGTATAGCAG 57.716 40.000 0.00 0.00 0.00 4.24
7576 13646 4.697352 ACCACTTTGATACAGACAAGCATC 59.303 41.667 0.00 0.00 0.00 3.91
7585 13655 5.423015 ACAGCTGATACCACTTTGATACAG 58.577 41.667 23.35 0.00 0.00 2.74
7681 14013 9.507329 CTGCCCTATGATATACAAAACATAACT 57.493 33.333 0.00 0.00 0.00 2.24
7753 14085 6.583050 GGCTTCATAGTACTTAAGAGTATGCG 59.417 42.308 10.09 10.29 40.33 4.73
7756 14088 6.208994 CCGGGCTTCATAGTACTTAAGAGTAT 59.791 42.308 10.09 3.37 40.33 2.12
7792 14124 7.665559 TGGAGTATGAAAGTAGACTGCAAAATT 59.334 33.333 0.00 0.00 37.31 1.82
7850 14205 3.309682 CGGTTATGTGTGGCTCTGTTATG 59.690 47.826 0.00 0.00 0.00 1.90
7871 14226 9.274065 GTTATAGTTGCTTGGATTTAAAGTTCG 57.726 33.333 0.00 0.00 0.00 3.95
8005 14362 6.154877 TCCTACCGTGATTAGTAAATTGGTCA 59.845 38.462 3.58 0.00 31.66 4.02
8030 14387 8.851145 TCATTGACGATAAGTTAGAAGCTCTAT 58.149 33.333 0.00 0.00 0.00 1.98
8056 14413 9.480053 CACATATCAATTTTCTTGGAACTTTGT 57.520 29.630 0.00 0.00 0.00 2.83
8073 14430 9.423061 CGGTTCATACAATATCTCACATATCAA 57.577 33.333 0.00 0.00 0.00 2.57
8078 14435 4.997395 GCCGGTTCATACAATATCTCACAT 59.003 41.667 1.90 0.00 0.00 3.21
8094 14451 1.521681 CCCTCATCTTCGCCGGTTC 60.522 63.158 1.90 0.00 0.00 3.62
8098 14455 0.174845 TAACACCCTCATCTTCGCCG 59.825 55.000 0.00 0.00 0.00 6.46
8116 14479 6.611642 ACATGCTGAAGATAAAGGGAGTAGTA 59.388 38.462 0.00 0.00 0.00 1.82
8117 14480 5.426833 ACATGCTGAAGATAAAGGGAGTAGT 59.573 40.000 0.00 0.00 0.00 2.73
8118 14481 5.923204 ACATGCTGAAGATAAAGGGAGTAG 58.077 41.667 0.00 0.00 0.00 2.57
8240 14604 9.507280 CATCATTATTTGTGTTGGTGATAAGAC 57.493 33.333 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.