Multiple sequence alignment - TraesCS5A01G209800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G209800 chr5A 100.000 5037 0 0 1 5037 423058665 423053629 0.000000e+00 9302.0
1 TraesCS5A01G209800 chr5D 91.803 4758 204 53 382 5037 324972082 324967409 0.000000e+00 6455.0
2 TraesCS5A01G209800 chr5B 89.858 4703 222 105 434 5037 377390565 377386019 0.000000e+00 5806.0
3 TraesCS5A01G209800 chr6D 94.256 383 21 1 1 382 60560236 60559854 7.270000e-163 584.0
4 TraesCS5A01G209800 chr1D 93.734 383 22 2 1 381 491896940 491896558 1.570000e-159 573.0
5 TraesCS5A01G209800 chr3A 93.455 382 23 2 1 381 729696305 729695925 2.630000e-157 566.0
6 TraesCS5A01G209800 chr1A 92.428 383 23 4 1 381 18102732 18102354 4.440000e-150 542.0
7 TraesCS5A01G209800 chr6B 91.990 387 23 5 1 381 46007963 46007579 2.060000e-148 536.0
8 TraesCS5A01G209800 chr6B 88.889 153 16 1 2003 2154 651217517 651217365 2.390000e-43 187.0
9 TraesCS5A01G209800 chr3B 91.192 386 26 5 1 383 312143886 312144266 7.480000e-143 518.0
10 TraesCS5A01G209800 chr3B 89.944 358 27 6 1 355 312144760 312144409 2.140000e-123 453.0
11 TraesCS5A01G209800 chr3B 89.076 238 25 1 1918 2154 460380580 460380343 1.370000e-75 294.0
12 TraesCS5A01G209800 chrUn 93.939 297 18 0 85 381 90701503 90701799 2.770000e-122 449.0
13 TraesCS5A01G209800 chr7A 87.667 300 36 1 1856 2154 121992 122291 1.040000e-91 348.0
14 TraesCS5A01G209800 chr7A 88.983 236 25 1 1920 2154 708790355 708790590 1.770000e-74 291.0
15 TraesCS5A01G209800 chr7A 89.394 66 7 0 1730 1795 121929 121994 3.230000e-12 84.2
16 TraesCS5A01G209800 chr2B 87.333 300 37 1 1856 2154 282993821 282993522 4.830000e-90 342.0
17 TraesCS5A01G209800 chr2B 87.879 66 8 0 1730 1795 282993884 282993819 1.500000e-10 78.7
18 TraesCS5A01G209800 chr2A 84.783 322 43 5 71 389 467703906 467704224 8.140000e-83 318.0
19 TraesCS5A01G209800 chr7B 89.496 238 24 1 1918 2154 568665938 568665701 2.950000e-77 300.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G209800 chr5A 423053629 423058665 5036 True 9302 9302 100.000 1 5037 1 chr5A.!!$R1 5036
1 TraesCS5A01G209800 chr5D 324967409 324972082 4673 True 6455 6455 91.803 382 5037 1 chr5D.!!$R1 4655
2 TraesCS5A01G209800 chr5B 377386019 377390565 4546 True 5806 5806 89.858 434 5037 1 chr5B.!!$R1 4603

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
270 271 0.035820 GCGGGTCCCATAGAACACAA 60.036 55.0 9.12 0.00 31.73 3.33 F
414 415 0.179084 CTGAATCCCGGTGCACGTAT 60.179 55.0 11.45 0.00 42.24 3.06 F
798 810 0.530870 CTCCCGATTCCTTCCTTCGC 60.531 60.0 0.00 0.00 0.00 4.70 F
944 985 0.532573 TTAAGAGGCTGTGAGCTCCG 59.467 55.0 12.15 0.52 41.99 4.63 F
2781 2844 0.031314 AGCACACGGAGCTATCATCG 59.969 55.0 0.00 0.00 41.32 3.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1644 1697 1.609320 GCCTCGAAGAAGGCTTTGACT 60.609 52.381 0.00 0.00 43.86 3.41 R
1647 1700 1.639298 CGGCCTCGAAGAAGGCTTTG 61.639 60.000 14.12 2.17 45.57 2.77 R
2757 2820 1.135139 GATAGCTCCGTGTGCTCTTCA 59.865 52.381 0.00 0.00 41.46 3.02 R
2830 2893 2.420687 CCCTAAGACCTTCATCCAGTGC 60.421 54.545 0.00 0.00 0.00 4.40 R
4464 4564 0.103208 ATCCTCTCGTCCACATTCGC 59.897 55.000 0.00 0.00 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.187685 CAGGCTCGCAGCACCATA 59.812 61.111 9.78 0.00 44.75 2.74
21 22 1.886313 CAGGCTCGCAGCACCATAG 60.886 63.158 9.78 0.00 44.75 2.23
22 23 2.590007 GGCTCGCAGCACCATAGG 60.590 66.667 9.78 0.00 44.75 2.57
23 24 2.501128 GCTCGCAGCACCATAGGA 59.499 61.111 0.00 0.00 41.89 2.94
24 25 1.884926 GCTCGCAGCACCATAGGAC 60.885 63.158 0.00 0.00 41.89 3.85
25 26 1.517361 CTCGCAGCACCATAGGACA 59.483 57.895 0.00 0.00 0.00 4.02
26 27 0.807667 CTCGCAGCACCATAGGACAC 60.808 60.000 0.00 0.00 0.00 3.67
27 28 1.079197 CGCAGCACCATAGGACACA 60.079 57.895 0.00 0.00 0.00 3.72
28 29 0.673333 CGCAGCACCATAGGACACAA 60.673 55.000 0.00 0.00 0.00 3.33
29 30 1.533625 GCAGCACCATAGGACACAAA 58.466 50.000 0.00 0.00 0.00 2.83
30 31 1.885887 GCAGCACCATAGGACACAAAA 59.114 47.619 0.00 0.00 0.00 2.44
31 32 2.295909 GCAGCACCATAGGACACAAAAA 59.704 45.455 0.00 0.00 0.00 1.94
32 33 3.612479 GCAGCACCATAGGACACAAAAAG 60.612 47.826 0.00 0.00 0.00 2.27
33 34 3.057315 CAGCACCATAGGACACAAAAAGG 60.057 47.826 0.00 0.00 0.00 3.11
34 35 3.153919 GCACCATAGGACACAAAAAGGA 58.846 45.455 0.00 0.00 0.00 3.36
35 36 3.572255 GCACCATAGGACACAAAAAGGAA 59.428 43.478 0.00 0.00 0.00 3.36
36 37 4.321230 GCACCATAGGACACAAAAAGGAAG 60.321 45.833 0.00 0.00 0.00 3.46
37 38 4.218417 CACCATAGGACACAAAAAGGAAGG 59.782 45.833 0.00 0.00 0.00 3.46
38 39 3.763897 CCATAGGACACAAAAAGGAAGGG 59.236 47.826 0.00 0.00 0.00 3.95
39 40 4.508405 CCATAGGACACAAAAAGGAAGGGA 60.508 45.833 0.00 0.00 0.00 4.20
40 41 3.680777 AGGACACAAAAAGGAAGGGAA 57.319 42.857 0.00 0.00 0.00 3.97
41 42 3.566351 AGGACACAAAAAGGAAGGGAAG 58.434 45.455 0.00 0.00 0.00 3.46
42 43 3.204382 AGGACACAAAAAGGAAGGGAAGA 59.796 43.478 0.00 0.00 0.00 2.87
43 44 3.958147 GGACACAAAAAGGAAGGGAAGAA 59.042 43.478 0.00 0.00 0.00 2.52
44 45 4.038042 GGACACAAAAAGGAAGGGAAGAAG 59.962 45.833 0.00 0.00 0.00 2.85
45 46 4.867086 ACACAAAAAGGAAGGGAAGAAGA 58.133 39.130 0.00 0.00 0.00 2.87
46 47 4.889995 ACACAAAAAGGAAGGGAAGAAGAG 59.110 41.667 0.00 0.00 0.00 2.85
47 48 4.279420 CACAAAAAGGAAGGGAAGAAGAGG 59.721 45.833 0.00 0.00 0.00 3.69
48 49 3.816398 AAAAGGAAGGGAAGAAGAGGG 57.184 47.619 0.00 0.00 0.00 4.30
49 50 1.675007 AAGGAAGGGAAGAAGAGGGG 58.325 55.000 0.00 0.00 0.00 4.79
50 51 0.253394 AGGAAGGGAAGAAGAGGGGG 60.253 60.000 0.00 0.00 0.00 5.40
66 67 4.329545 GGGAGCGCAGGACCACAA 62.330 66.667 11.47 0.00 0.00 3.33
67 68 2.743928 GGAGCGCAGGACCACAAG 60.744 66.667 11.47 0.00 0.00 3.16
68 69 2.743928 GAGCGCAGGACCACAAGG 60.744 66.667 11.47 0.00 42.21 3.61
69 70 4.335647 AGCGCAGGACCACAAGGG 62.336 66.667 11.47 0.00 44.81 3.95
78 79 0.961753 GACCACAAGGGCAGAAAAGG 59.038 55.000 0.00 0.00 45.05 3.11
79 80 0.469892 ACCACAAGGGCAGAAAAGGG 60.470 55.000 0.00 0.00 42.05 3.95
80 81 1.187567 CCACAAGGGCAGAAAAGGGG 61.188 60.000 0.00 0.00 0.00 4.79
81 82 1.156095 ACAAGGGCAGAAAAGGGGG 59.844 57.895 0.00 0.00 0.00 5.40
82 83 2.120496 AAGGGCAGAAAAGGGGGC 59.880 61.111 0.00 0.00 0.00 5.80
83 84 3.546144 AAGGGCAGAAAAGGGGGCC 62.546 63.158 0.00 0.00 46.79 5.80
87 88 4.759205 CAGAAAAGGGGGCCGGGG 62.759 72.222 2.18 0.00 0.00 5.73
114 115 2.824041 GCCACGGCCACCACATAG 60.824 66.667 2.24 0.00 34.56 2.23
115 116 2.824041 CCACGGCCACCACATAGC 60.824 66.667 2.24 0.00 0.00 2.97
116 117 2.046411 CACGGCCACCACATAGCA 60.046 61.111 2.24 0.00 0.00 3.49
117 118 2.108514 CACGGCCACCACATAGCAG 61.109 63.158 2.24 0.00 0.00 4.24
118 119 2.290287 ACGGCCACCACATAGCAGA 61.290 57.895 2.24 0.00 0.00 4.26
119 120 1.078497 CGGCCACCACATAGCAGAA 60.078 57.895 2.24 0.00 0.00 3.02
120 121 1.091771 CGGCCACCACATAGCAGAAG 61.092 60.000 2.24 0.00 0.00 2.85
121 122 0.749454 GGCCACCACATAGCAGAAGG 60.749 60.000 0.00 0.00 0.00 3.46
122 123 0.253044 GCCACCACATAGCAGAAGGA 59.747 55.000 0.00 0.00 0.00 3.36
123 124 1.745141 GCCACCACATAGCAGAAGGAG 60.745 57.143 0.00 0.00 0.00 3.69
124 125 1.833630 CCACCACATAGCAGAAGGAGA 59.166 52.381 0.00 0.00 0.00 3.71
125 126 2.158986 CCACCACATAGCAGAAGGAGAG 60.159 54.545 0.00 0.00 0.00 3.20
126 127 2.114616 ACCACATAGCAGAAGGAGAGG 58.885 52.381 0.00 0.00 0.00 3.69
127 128 2.292521 ACCACATAGCAGAAGGAGAGGA 60.293 50.000 0.00 0.00 0.00 3.71
128 129 2.364970 CCACATAGCAGAAGGAGAGGAG 59.635 54.545 0.00 0.00 0.00 3.69
129 130 2.364970 CACATAGCAGAAGGAGAGGAGG 59.635 54.545 0.00 0.00 0.00 4.30
130 131 1.344114 CATAGCAGAAGGAGAGGAGGC 59.656 57.143 0.00 0.00 0.00 4.70
131 132 0.753479 TAGCAGAAGGAGAGGAGGCG 60.753 60.000 0.00 0.00 0.00 5.52
132 133 2.055042 GCAGAAGGAGAGGAGGCGA 61.055 63.158 0.00 0.00 0.00 5.54
133 134 2.015227 GCAGAAGGAGAGGAGGCGAG 62.015 65.000 0.00 0.00 0.00 5.03
134 135 1.756561 AGAAGGAGAGGAGGCGAGC 60.757 63.158 0.00 0.00 0.00 5.03
135 136 2.762043 AAGGAGAGGAGGCGAGCC 60.762 66.667 5.89 5.89 0.00 4.70
144 145 4.502187 AGGCGAGCCTCATCGATA 57.498 55.556 11.42 0.00 44.43 2.92
145 146 2.968737 AGGCGAGCCTCATCGATAT 58.031 52.632 11.42 0.00 44.43 1.63
146 147 0.814457 AGGCGAGCCTCATCGATATC 59.186 55.000 11.42 0.00 44.43 1.63
147 148 0.814457 GGCGAGCCTCATCGATATCT 59.186 55.000 6.90 0.00 45.56 1.98
148 149 1.202245 GGCGAGCCTCATCGATATCTC 60.202 57.143 6.90 1.73 45.56 2.75
149 150 1.530852 GCGAGCCTCATCGATATCTCG 60.531 57.143 22.32 22.32 45.56 4.04
160 161 1.719600 GATATCTCGATGGTGGCAGC 58.280 55.000 10.30 10.30 0.00 5.25
161 162 0.322975 ATATCTCGATGGTGGCAGCC 59.677 55.000 14.97 3.66 0.00 4.85
162 163 1.048160 TATCTCGATGGTGGCAGCCA 61.048 55.000 11.22 11.22 43.48 4.75
176 177 2.830370 GCCATGGCGGAGAAAGGG 60.830 66.667 23.48 0.00 36.56 3.95
177 178 2.124151 CCATGGCGGAGAAAGGGG 60.124 66.667 0.00 0.00 36.56 4.79
178 179 2.124151 CATGGCGGAGAAAGGGGG 60.124 66.667 0.00 0.00 0.00 5.40
179 180 2.614013 ATGGCGGAGAAAGGGGGT 60.614 61.111 0.00 0.00 0.00 4.95
180 181 2.983879 ATGGCGGAGAAAGGGGGTG 61.984 63.158 0.00 0.00 0.00 4.61
181 182 3.647771 GGCGGAGAAAGGGGGTGT 61.648 66.667 0.00 0.00 0.00 4.16
182 183 2.359975 GCGGAGAAAGGGGGTGTG 60.360 66.667 0.00 0.00 0.00 3.82
183 184 2.351276 CGGAGAAAGGGGGTGTGG 59.649 66.667 0.00 0.00 0.00 4.17
184 185 2.763902 GGAGAAAGGGGGTGTGGG 59.236 66.667 0.00 0.00 0.00 4.61
185 186 2.763902 GAGAAAGGGGGTGTGGGG 59.236 66.667 0.00 0.00 0.00 4.96
186 187 1.850755 GAGAAAGGGGGTGTGGGGA 60.851 63.158 0.00 0.00 0.00 4.81
187 188 1.388217 AGAAAGGGGGTGTGGGGAA 60.388 57.895 0.00 0.00 0.00 3.97
188 189 1.002242 AGAAAGGGGGTGTGGGGAAA 61.002 55.000 0.00 0.00 0.00 3.13
189 190 0.105401 GAAAGGGGGTGTGGGGAAAA 60.105 55.000 0.00 0.00 0.00 2.29
190 191 0.105194 AAAGGGGGTGTGGGGAAAAG 60.105 55.000 0.00 0.00 0.00 2.27
191 192 1.002242 AAGGGGGTGTGGGGAAAAGA 61.002 55.000 0.00 0.00 0.00 2.52
192 193 1.002242 AGGGGGTGTGGGGAAAAGAA 61.002 55.000 0.00 0.00 0.00 2.52
193 194 0.116342 GGGGGTGTGGGGAAAAGAAT 59.884 55.000 0.00 0.00 0.00 2.40
194 195 1.557099 GGGGTGTGGGGAAAAGAATC 58.443 55.000 0.00 0.00 0.00 2.52
195 196 1.203125 GGGGTGTGGGGAAAAGAATCA 60.203 52.381 0.00 0.00 0.00 2.57
196 197 2.171003 GGGTGTGGGGAAAAGAATCAG 58.829 52.381 0.00 0.00 0.00 2.90
197 198 2.225017 GGGTGTGGGGAAAAGAATCAGA 60.225 50.000 0.00 0.00 0.00 3.27
198 199 3.084786 GGTGTGGGGAAAAGAATCAGAG 58.915 50.000 0.00 0.00 0.00 3.35
199 200 3.244911 GGTGTGGGGAAAAGAATCAGAGA 60.245 47.826 0.00 0.00 0.00 3.10
200 201 4.398319 GTGTGGGGAAAAGAATCAGAGAA 58.602 43.478 0.00 0.00 0.00 2.87
201 202 4.457257 GTGTGGGGAAAAGAATCAGAGAAG 59.543 45.833 0.00 0.00 0.00 2.85
202 203 4.013050 GTGGGGAAAAGAATCAGAGAAGG 58.987 47.826 0.00 0.00 0.00 3.46
203 204 3.916349 TGGGGAAAAGAATCAGAGAAGGA 59.084 43.478 0.00 0.00 0.00 3.36
204 205 4.353788 TGGGGAAAAGAATCAGAGAAGGAA 59.646 41.667 0.00 0.00 0.00 3.36
205 206 4.946772 GGGGAAAAGAATCAGAGAAGGAAG 59.053 45.833 0.00 0.00 0.00 3.46
206 207 5.280727 GGGGAAAAGAATCAGAGAAGGAAGA 60.281 44.000 0.00 0.00 0.00 2.87
207 208 6.422333 GGGAAAAGAATCAGAGAAGGAAGAT 58.578 40.000 0.00 0.00 0.00 2.40
208 209 6.318396 GGGAAAAGAATCAGAGAAGGAAGATG 59.682 42.308 0.00 0.00 0.00 2.90
209 210 7.108847 GGAAAAGAATCAGAGAAGGAAGATGA 58.891 38.462 0.00 0.00 0.00 2.92
210 211 7.280652 GGAAAAGAATCAGAGAAGGAAGATGAG 59.719 40.741 0.00 0.00 0.00 2.90
211 212 5.874897 AGAATCAGAGAAGGAAGATGAGG 57.125 43.478 0.00 0.00 0.00 3.86
212 213 4.655186 AGAATCAGAGAAGGAAGATGAGGG 59.345 45.833 0.00 0.00 0.00 4.30
213 214 3.765432 TCAGAGAAGGAAGATGAGGGA 57.235 47.619 0.00 0.00 0.00 4.20
214 215 4.277788 TCAGAGAAGGAAGATGAGGGAT 57.722 45.455 0.00 0.00 0.00 3.85
215 216 3.966006 TCAGAGAAGGAAGATGAGGGATG 59.034 47.826 0.00 0.00 0.00 3.51
216 217 3.966006 CAGAGAAGGAAGATGAGGGATGA 59.034 47.826 0.00 0.00 0.00 2.92
217 218 4.039488 CAGAGAAGGAAGATGAGGGATGAG 59.961 50.000 0.00 0.00 0.00 2.90
218 219 3.966665 GAGAAGGAAGATGAGGGATGAGT 59.033 47.826 0.00 0.00 0.00 3.41
219 220 3.710677 AGAAGGAAGATGAGGGATGAGTG 59.289 47.826 0.00 0.00 0.00 3.51
220 221 1.767681 AGGAAGATGAGGGATGAGTGC 59.232 52.381 0.00 0.00 0.00 4.40
221 222 1.539929 GGAAGATGAGGGATGAGTGCG 60.540 57.143 0.00 0.00 0.00 5.34
222 223 1.137872 GAAGATGAGGGATGAGTGCGT 59.862 52.381 0.00 0.00 0.00 5.24
223 224 0.463204 AGATGAGGGATGAGTGCGTG 59.537 55.000 0.00 0.00 0.00 5.34
224 225 0.531532 GATGAGGGATGAGTGCGTGG 60.532 60.000 0.00 0.00 0.00 4.94
225 226 0.977627 ATGAGGGATGAGTGCGTGGA 60.978 55.000 0.00 0.00 0.00 4.02
226 227 0.977627 TGAGGGATGAGTGCGTGGAT 60.978 55.000 0.00 0.00 0.00 3.41
227 228 0.531532 GAGGGATGAGTGCGTGGATG 60.532 60.000 0.00 0.00 0.00 3.51
228 229 1.524621 GGGATGAGTGCGTGGATGG 60.525 63.158 0.00 0.00 0.00 3.51
229 230 1.522092 GGATGAGTGCGTGGATGGA 59.478 57.895 0.00 0.00 0.00 3.41
230 231 0.107456 GGATGAGTGCGTGGATGGAT 59.893 55.000 0.00 0.00 0.00 3.41
231 232 1.344438 GGATGAGTGCGTGGATGGATA 59.656 52.381 0.00 0.00 0.00 2.59
232 233 2.224281 GGATGAGTGCGTGGATGGATAA 60.224 50.000 0.00 0.00 0.00 1.75
233 234 2.602257 TGAGTGCGTGGATGGATAAG 57.398 50.000 0.00 0.00 0.00 1.73
234 235 1.138859 TGAGTGCGTGGATGGATAAGG 59.861 52.381 0.00 0.00 0.00 2.69
235 236 0.469917 AGTGCGTGGATGGATAAGGG 59.530 55.000 0.00 0.00 0.00 3.95
236 237 0.468226 GTGCGTGGATGGATAAGGGA 59.532 55.000 0.00 0.00 0.00 4.20
237 238 1.134220 GTGCGTGGATGGATAAGGGAA 60.134 52.381 0.00 0.00 0.00 3.97
238 239 1.562008 TGCGTGGATGGATAAGGGAAA 59.438 47.619 0.00 0.00 0.00 3.13
239 240 2.222027 GCGTGGATGGATAAGGGAAAG 58.778 52.381 0.00 0.00 0.00 2.62
240 241 2.851195 CGTGGATGGATAAGGGAAAGG 58.149 52.381 0.00 0.00 0.00 3.11
241 242 2.172717 CGTGGATGGATAAGGGAAAGGT 59.827 50.000 0.00 0.00 0.00 3.50
242 243 3.555966 GTGGATGGATAAGGGAAAGGTG 58.444 50.000 0.00 0.00 0.00 4.00
243 244 2.513738 TGGATGGATAAGGGAAAGGTGG 59.486 50.000 0.00 0.00 0.00 4.61
244 245 2.158460 GGATGGATAAGGGAAAGGTGGG 60.158 54.545 0.00 0.00 0.00 4.61
245 246 0.629058 TGGATAAGGGAAAGGTGGGC 59.371 55.000 0.00 0.00 0.00 5.36
246 247 0.465642 GGATAAGGGAAAGGTGGGCG 60.466 60.000 0.00 0.00 0.00 6.13
247 248 0.465642 GATAAGGGAAAGGTGGGCGG 60.466 60.000 0.00 0.00 0.00 6.13
248 249 1.212250 ATAAGGGAAAGGTGGGCGGT 61.212 55.000 0.00 0.00 0.00 5.68
249 250 2.132089 TAAGGGAAAGGTGGGCGGTG 62.132 60.000 0.00 0.00 0.00 4.94
263 264 4.910585 GGTGCGCGGGTCCCATAG 62.911 72.222 8.83 0.00 0.00 2.23
264 265 3.845259 GTGCGCGGGTCCCATAGA 61.845 66.667 8.83 0.00 0.00 1.98
265 266 3.078196 TGCGCGGGTCCCATAGAA 61.078 61.111 8.83 0.00 0.00 2.10
266 267 2.588034 GCGCGGGTCCCATAGAAC 60.588 66.667 8.83 0.00 0.00 3.01
267 268 2.897207 CGCGGGTCCCATAGAACA 59.103 61.111 9.12 0.00 31.73 3.18
268 269 1.520787 CGCGGGTCCCATAGAACAC 60.521 63.158 9.12 0.00 31.73 3.32
269 270 1.600107 GCGGGTCCCATAGAACACA 59.400 57.895 9.12 0.00 31.73 3.72
270 271 0.035820 GCGGGTCCCATAGAACACAA 60.036 55.000 9.12 0.00 31.73 3.33
271 272 1.734163 CGGGTCCCATAGAACACAAC 58.266 55.000 9.12 0.00 31.73 3.32
272 273 1.734163 GGGTCCCATAGAACACAACG 58.266 55.000 1.78 0.00 31.73 4.10
273 274 1.002773 GGGTCCCATAGAACACAACGT 59.997 52.381 1.78 0.00 31.73 3.99
274 275 2.234414 GGGTCCCATAGAACACAACGTA 59.766 50.000 1.78 0.00 31.73 3.57
275 276 3.518590 GGTCCCATAGAACACAACGTAG 58.481 50.000 0.00 0.00 29.87 3.51
276 277 3.056322 GGTCCCATAGAACACAACGTAGT 60.056 47.826 0.00 0.00 34.57 2.73
277 278 4.158394 GGTCCCATAGAACACAACGTAGTA 59.842 45.833 0.00 0.00 32.06 1.82
278 279 5.098211 GTCCCATAGAACACAACGTAGTAC 58.902 45.833 0.00 0.00 45.00 2.73
279 280 4.766373 TCCCATAGAACACAACGTAGTACA 59.234 41.667 0.38 0.00 45.00 2.90
280 281 5.243507 TCCCATAGAACACAACGTAGTACAA 59.756 40.000 0.38 0.00 45.00 2.41
281 282 5.346822 CCCATAGAACACAACGTAGTACAAC 59.653 44.000 0.38 0.00 45.00 3.32
282 283 5.060077 CCATAGAACACAACGTAGTACAACG 59.940 44.000 0.38 0.00 45.00 4.10
292 293 2.655474 CGTAGTACAACGTGTGAGAAGC 59.345 50.000 0.38 0.00 38.07 3.86
293 294 2.882927 AGTACAACGTGTGAGAAGCA 57.117 45.000 0.00 0.00 0.00 3.91
294 295 2.743938 AGTACAACGTGTGAGAAGCAG 58.256 47.619 0.00 0.00 0.00 4.24
295 296 1.792949 GTACAACGTGTGAGAAGCAGG 59.207 52.381 0.00 0.00 0.00 4.85
296 297 0.464036 ACAACGTGTGAGAAGCAGGA 59.536 50.000 0.00 0.00 0.00 3.86
297 298 0.861837 CAACGTGTGAGAAGCAGGAC 59.138 55.000 0.00 0.00 0.00 3.85
298 299 0.597637 AACGTGTGAGAAGCAGGACG 60.598 55.000 0.00 0.00 38.74 4.79
299 300 2.375766 CGTGTGAGAAGCAGGACGC 61.376 63.158 0.00 0.00 42.91 5.19
308 309 3.607987 GCAGGACGCGTTCGATCG 61.608 66.667 15.53 9.36 39.41 3.69
309 310 2.949678 CAGGACGCGTTCGATCGG 60.950 66.667 15.53 9.75 39.41 4.18
310 311 3.437795 AGGACGCGTTCGATCGGT 61.438 61.111 15.53 12.57 39.41 4.69
311 312 3.245315 GGACGCGTTCGATCGGTG 61.245 66.667 15.53 8.54 39.41 4.94
312 313 2.503375 GACGCGTTCGATCGGTGT 60.503 61.111 15.53 11.94 39.41 4.16
313 314 2.774951 GACGCGTTCGATCGGTGTG 61.775 63.158 15.53 13.76 39.41 3.82
314 315 2.803670 CGCGTTCGATCGGTGTGT 60.804 61.111 16.41 0.00 38.10 3.72
315 316 2.369629 CGCGTTCGATCGGTGTGTT 61.370 57.895 16.41 0.00 38.10 3.32
316 317 1.129809 GCGTTCGATCGGTGTGTTG 59.870 57.895 16.41 0.00 0.00 3.33
317 318 1.129809 CGTTCGATCGGTGTGTTGC 59.870 57.895 16.41 0.00 0.00 4.17
318 319 1.553195 CGTTCGATCGGTGTGTTGCA 61.553 55.000 16.41 0.00 0.00 4.08
319 320 0.796312 GTTCGATCGGTGTGTTGCAT 59.204 50.000 16.41 0.00 0.00 3.96
320 321 1.996898 GTTCGATCGGTGTGTTGCATA 59.003 47.619 16.41 0.00 0.00 3.14
321 322 1.921243 TCGATCGGTGTGTTGCATAG 58.079 50.000 16.41 0.00 0.00 2.23
322 323 1.203758 TCGATCGGTGTGTTGCATAGT 59.796 47.619 16.41 0.00 0.00 2.12
323 324 2.424246 TCGATCGGTGTGTTGCATAGTA 59.576 45.455 16.41 0.00 0.00 1.82
324 325 2.534349 CGATCGGTGTGTTGCATAGTAC 59.466 50.000 7.38 0.00 0.00 2.73
325 326 1.985334 TCGGTGTGTTGCATAGTACG 58.015 50.000 0.00 0.00 0.00 3.67
326 327 1.270274 TCGGTGTGTTGCATAGTACGT 59.730 47.619 0.00 0.00 0.00 3.57
327 328 1.388768 CGGTGTGTTGCATAGTACGTG 59.611 52.381 0.00 0.00 0.00 4.49
328 329 1.127951 GGTGTGTTGCATAGTACGTGC 59.872 52.381 16.36 16.36 42.81 5.34
329 330 1.127951 GTGTGTTGCATAGTACGTGCC 59.872 52.381 19.19 8.86 41.83 5.01
330 331 0.368907 GTGTTGCATAGTACGTGCCG 59.631 55.000 19.19 0.00 41.83 5.69
331 332 1.347221 GTTGCATAGTACGTGCCGC 59.653 57.895 19.19 0.19 41.83 6.53
349 350 4.778143 GTGCGACCGGCCCAATCT 62.778 66.667 0.00 0.00 42.61 2.40
350 351 4.028490 TGCGACCGGCCCAATCTT 62.028 61.111 0.00 0.00 42.61 2.40
351 352 3.202706 GCGACCGGCCCAATCTTC 61.203 66.667 0.00 0.00 34.80 2.87
352 353 2.890474 CGACCGGCCCAATCTTCG 60.890 66.667 0.00 0.00 0.00 3.79
353 354 2.513897 GACCGGCCCAATCTTCGG 60.514 66.667 0.00 0.00 46.95 4.30
354 355 4.796495 ACCGGCCCAATCTTCGGC 62.796 66.667 0.00 0.00 45.65 5.54
376 377 3.894947 GCACCGGCCACAAACGTT 61.895 61.111 0.00 0.00 0.00 3.99
377 378 2.802106 CACCGGCCACAAACGTTT 59.198 55.556 7.96 7.96 0.00 3.60
378 379 2.023318 CACCGGCCACAAACGTTTA 58.977 52.632 14.20 0.00 0.00 2.01
379 380 0.317186 CACCGGCCACAAACGTTTAC 60.317 55.000 14.20 3.73 0.00 2.01
380 381 1.283487 CCGGCCACAAACGTTTACC 59.717 57.895 14.20 11.66 0.00 2.85
385 386 3.304525 CGGCCACAAACGTTTACCAATAA 60.305 43.478 14.20 0.00 0.00 1.40
388 389 6.388278 GGCCACAAACGTTTACCAATAATAA 58.612 36.000 14.20 0.00 0.00 1.40
414 415 0.179084 CTGAATCCCGGTGCACGTAT 60.179 55.000 11.45 0.00 42.24 3.06
416 417 1.067974 TGAATCCCGGTGCACGTATAG 59.932 52.381 11.45 0.00 42.24 1.31
417 418 1.068127 GAATCCCGGTGCACGTATAGT 59.932 52.381 11.45 0.00 42.24 2.12
419 420 1.311859 TCCCGGTGCACGTATAGTAG 58.688 55.000 11.45 0.00 42.24 2.57
420 421 1.134128 TCCCGGTGCACGTATAGTAGA 60.134 52.381 11.45 0.00 42.24 2.59
421 422 1.266175 CCCGGTGCACGTATAGTAGAG 59.734 57.143 11.45 0.00 42.24 2.43
424 425 3.547613 CCGGTGCACGTATAGTAGAGAAC 60.548 52.174 11.45 0.00 42.24 3.01
425 426 3.615614 GGTGCACGTATAGTAGAGAACG 58.384 50.000 11.45 0.00 40.99 3.95
426 427 3.034562 GTGCACGTATAGTAGAGAACGC 58.965 50.000 0.00 0.00 38.87 4.84
427 428 2.286008 TGCACGTATAGTAGAGAACGCG 60.286 50.000 3.53 3.53 38.87 6.01
428 429 2.033407 GCACGTATAGTAGAGAACGCGA 60.033 50.000 15.93 0.00 38.87 5.87
429 430 3.785599 CACGTATAGTAGAGAACGCGAG 58.214 50.000 15.93 0.00 38.87 5.03
470 471 1.305930 GGGCAGTTCGGACATTCACC 61.306 60.000 0.00 0.00 0.00 4.02
510 511 2.154462 CCGCCTTCCTATAATTGGCAG 58.846 52.381 0.00 0.00 43.38 4.85
571 572 4.719616 GCCGCGAACGCACAAGAC 62.720 66.667 18.69 0.00 42.06 3.01
572 573 4.409588 CCGCGAACGCACAAGACG 62.410 66.667 18.69 1.04 42.06 4.18
574 575 3.995669 GCGAACGCACAAGACGCA 61.996 61.111 14.26 0.00 46.75 5.24
576 577 1.717728 CGAACGCACAAGACGCAAC 60.718 57.895 0.00 0.00 0.00 4.17
577 578 1.368850 GAACGCACAAGACGCAACC 60.369 57.895 0.00 0.00 0.00 3.77
584 585 2.203437 AAGACGCAACCCAACCCC 60.203 61.111 0.00 0.00 0.00 4.95
586 587 2.519780 GACGCAACCCAACCCCAA 60.520 61.111 0.00 0.00 0.00 4.12
595 600 2.612251 CAACCCCAACCCAACCCT 59.388 61.111 0.00 0.00 0.00 4.34
620 625 1.136446 AGAATAAACACGCGACGCAAC 60.136 47.619 21.35 0.00 0.00 4.17
621 626 0.582482 AATAAACACGCGACGCAACA 59.418 45.000 21.35 0.00 0.00 3.33
623 628 1.419107 TAAACACGCGACGCAACACA 61.419 50.000 21.35 0.00 0.00 3.72
624 629 2.625706 AAACACGCGACGCAACACAG 62.626 55.000 21.35 4.53 0.00 3.66
657 662 2.416680 ATTCCTGCTCCTTGCTTCTC 57.583 50.000 0.00 0.00 43.37 2.87
735 747 1.772063 CGCCCCGATCGAAAATCCAC 61.772 60.000 18.66 0.00 0.00 4.02
798 810 0.530870 CTCCCGATTCCTTCCTTCGC 60.531 60.000 0.00 0.00 0.00 4.70
799 811 1.523938 CCCGATTCCTTCCTTCGCC 60.524 63.158 0.00 0.00 0.00 5.54
800 812 1.883084 CCGATTCCTTCCTTCGCCG 60.883 63.158 0.00 0.00 0.00 6.46
801 813 2.526120 CGATTCCTTCCTTCGCCGC 61.526 63.158 0.00 0.00 0.00 6.53
802 814 2.124695 ATTCCTTCCTTCGCCGCC 60.125 61.111 0.00 0.00 0.00 6.13
935 976 3.738281 CGGTGTGGATAGTTAAGAGGCTG 60.738 52.174 0.00 0.00 0.00 4.85
942 983 4.500716 GGATAGTTAAGAGGCTGTGAGCTC 60.501 50.000 6.82 6.82 41.99 4.09
944 985 0.532573 TTAAGAGGCTGTGAGCTCCG 59.467 55.000 12.15 0.52 41.99 4.63
945 986 1.323271 TAAGAGGCTGTGAGCTCCGG 61.323 60.000 12.15 8.88 41.99 5.14
946 987 4.828925 GAGGCTGTGAGCTCCGGC 62.829 72.222 21.28 21.28 41.99 6.13
1023 1064 1.521681 CCTGTCGGCGATTTCCCTC 60.522 63.158 14.79 0.00 0.00 4.30
1062 1109 1.529713 CGCCTACTCCTCCTCCTCC 60.530 68.421 0.00 0.00 0.00 4.30
1359 1409 4.436998 CACAGCCCCGTCTCGGTC 62.437 72.222 7.40 0.00 46.80 4.79
1368 1418 2.579738 GTCTCGGTCTTCCAGGGC 59.420 66.667 0.00 0.00 0.00 5.19
1374 1424 4.097361 GTCTTCCAGGGCCCGTCC 62.097 72.222 18.44 0.00 0.00 4.79
1714 1767 0.880278 CCGTGGCCCGATTATCACTG 60.880 60.000 14.30 0.00 39.56 3.66
1727 1780 4.715534 TTATCACTGTCCCCTGTTCAAA 57.284 40.909 0.00 0.00 0.00 2.69
1736 1789 4.959210 TGTCCCCTGTTCAAAAATTTCTGA 59.041 37.500 0.00 0.00 0.00 3.27
1974 2029 1.272816 TGATCTCGTGGAAGGGGTACA 60.273 52.381 0.00 0.00 0.00 2.90
1984 2039 2.576648 GGAAGGGGTACATGTTCCTCTT 59.423 50.000 30.56 30.56 45.92 2.85
1988 2043 2.159085 GGGGTACATGTTCCTCTTCTCG 60.159 54.545 19.60 0.00 0.00 4.04
1998 2053 4.065789 GTTCCTCTTCTCGTGGATTTTGT 58.934 43.478 0.00 0.00 35.36 2.83
2040 2096 4.072839 GGATAATGGGTTTGGTAGCTAGC 58.927 47.826 16.08 16.08 0.00 3.42
2098 2154 5.755813 CTGGATCTACTGCAATTATTGTGC 58.244 41.667 6.81 0.00 42.55 4.57
2099 2155 4.580167 TGGATCTACTGCAATTATTGTGCC 59.420 41.667 6.81 0.00 41.49 5.01
2172 2228 1.003580 TGTGCATCTCCCTTTCACCTC 59.996 52.381 0.00 0.00 0.00 3.85
2183 2239 6.327626 TCTCCCTTTCACCTCCATTATCTTAG 59.672 42.308 0.00 0.00 0.00 2.18
2231 2288 5.250200 TGAAGCCCAACGTATATGACTTTT 58.750 37.500 0.00 0.00 0.00 2.27
2232 2289 6.408035 TGAAGCCCAACGTATATGACTTTTA 58.592 36.000 0.00 0.00 0.00 1.52
2313 2376 7.756272 TGCTTTGATCATACTTGCAATAAACTG 59.244 33.333 0.00 0.00 0.00 3.16
2357 2420 9.398170 CACCACTAACAATTTATTTGACTTCAG 57.602 33.333 0.00 0.00 38.76 3.02
2381 2444 2.664402 ATGGCATGGAGTATGGGTTC 57.336 50.000 0.00 0.00 37.26 3.62
2450 2513 3.438087 TCTTGCAAGCTGATAGTTTCTGC 59.562 43.478 21.99 4.61 46.52 4.26
2482 2545 1.578206 GGTTTCGAAGCTGAGCCACC 61.578 60.000 11.94 3.87 0.00 4.61
2775 2838 0.528017 CTGAAGAGCACACGGAGCTA 59.472 55.000 0.00 0.00 43.58 3.32
2781 2844 0.031314 AGCACACGGAGCTATCATCG 59.969 55.000 0.00 0.00 41.32 3.84
3019 3086 4.348863 TGCTAATTGGTTTTGGCACATT 57.651 36.364 0.00 0.00 38.05 2.71
3021 3088 5.233988 TGCTAATTGGTTTTGGCACATTAC 58.766 37.500 0.00 0.00 38.05 1.89
3151 3218 1.271926 CCCCAAGTCACCGGAAGATTT 60.272 52.381 9.46 5.99 0.00 2.17
3214 3281 7.415541 GCAGCTTAACTTCAATACATCCATTCA 60.416 37.037 0.00 0.00 0.00 2.57
3225 3292 0.331278 ATCCATTCAACCTTCGGCCA 59.669 50.000 2.24 0.00 0.00 5.36
3229 3297 2.417243 CCATTCAACCTTCGGCCATTTC 60.417 50.000 2.24 0.00 0.00 2.17
3253 3321 1.610522 AGAGTTTGCGCTGATTTGCTT 59.389 42.857 9.73 0.00 0.00 3.91
3364 3434 2.588034 GCCGAGTATGGGTTCGCC 60.588 66.667 0.00 0.00 35.77 5.54
3430 3500 0.703488 TTCAGATGGTGGAATGGGCA 59.297 50.000 0.00 0.00 0.00 5.36
3439 3509 0.413037 TGGAATGGGCAAGATGGGTT 59.587 50.000 0.00 0.00 0.00 4.11
3478 3548 4.164822 AGCATTGAACAAGGAACATTCG 57.835 40.909 3.41 0.00 0.00 3.34
3529 3599 2.117423 CCTTGCCCGTTTCCCCTT 59.883 61.111 0.00 0.00 0.00 3.95
3598 3668 2.076863 GGACCCTTGTTCGTCATCTTG 58.923 52.381 0.00 0.00 0.00 3.02
3651 3721 2.604614 CGGTCGATCGATCACATTGCTA 60.605 50.000 26.79 0.00 0.00 3.49
3652 3722 3.381045 GGTCGATCGATCACATTGCTAA 58.619 45.455 23.20 0.00 0.00 3.09
3653 3723 3.990469 GGTCGATCGATCACATTGCTAAT 59.010 43.478 23.20 0.00 0.00 1.73
3654 3724 4.143242 GGTCGATCGATCACATTGCTAATG 60.143 45.833 23.20 4.40 44.48 1.90
3666 3736 5.196341 CATTGCTAATGTTGCCATCATCT 57.804 39.130 0.00 0.00 34.18 2.90
3667 3737 5.597806 CATTGCTAATGTTGCCATCATCTT 58.402 37.500 0.00 0.00 34.18 2.40
3668 3738 4.906065 TGCTAATGTTGCCATCATCTTC 57.094 40.909 0.00 0.00 0.00 2.87
3671 3741 5.039333 GCTAATGTTGCCATCATCTTCAAC 58.961 41.667 0.00 0.00 39.23 3.18
3684 3754 2.540515 TCTTCAACGCCGATCATCTTC 58.459 47.619 0.00 0.00 0.00 2.87
3693 3763 2.208431 CCGATCATCTTCAGTTCCAGC 58.792 52.381 0.00 0.00 0.00 4.85
3697 3767 5.295950 CGATCATCTTCAGTTCCAGCTATT 58.704 41.667 0.00 0.00 0.00 1.73
3703 3773 5.620206 TCTTCAGTTCCAGCTATTTGACAA 58.380 37.500 0.00 0.00 0.00 3.18
3739 3809 2.996621 GTTTCAGATGTCCGTCCAAGAG 59.003 50.000 0.00 0.00 0.00 2.85
3748 3818 1.738099 CGTCCAAGAGTTCCCAGCG 60.738 63.158 0.00 0.00 0.00 5.18
3781 3851 3.490759 GACCTGATGCACCGCGTG 61.491 66.667 4.92 4.73 36.51 5.34
3862 3932 1.745489 GGTGAACCACGAGCCCATC 60.745 63.158 0.00 0.00 34.83 3.51
4157 4235 1.334869 CTAATTCTTGGCGGCCATGAC 59.665 52.381 30.52 1.69 37.41 3.06
4229 4314 3.252215 TGGCTGCAAAATGTGTACACTAC 59.748 43.478 25.60 9.82 0.00 2.73
4233 4318 3.252215 TGCAAAATGTGTACACTACCAGC 59.748 43.478 25.60 21.88 0.00 4.85
4234 4319 3.252215 GCAAAATGTGTACACTACCAGCA 59.748 43.478 25.60 5.06 0.00 4.41
4235 4320 4.082787 GCAAAATGTGTACACTACCAGCAT 60.083 41.667 25.60 7.26 0.00 3.79
4241 4326 2.094026 TGTACACTACCAGCATGCAGAG 60.094 50.000 21.98 12.97 31.97 3.35
4285 4376 2.973224 CGTTCAAGTTTGATTCGGCTTG 59.027 45.455 0.00 0.00 39.52 4.01
4312 4403 1.412079 CAGGATCTGTGGAGAGGAGG 58.588 60.000 0.00 0.00 0.00 4.30
4313 4404 0.264359 AGGATCTGTGGAGAGGAGGG 59.736 60.000 0.00 0.00 0.00 4.30
4315 4406 1.132881 GGATCTGTGGAGAGGAGGGAT 60.133 57.143 0.00 0.00 0.00 3.85
4319 4410 1.211457 CTGTGGAGAGGAGGGATTTGG 59.789 57.143 0.00 0.00 0.00 3.28
4361 4453 6.039047 CGATGAAAAGATCCTGTGATGGAATT 59.961 38.462 0.00 0.00 39.85 2.17
4409 4501 2.746362 CTGTGGCCTCAACTGAATCTTC 59.254 50.000 9.14 0.00 0.00 2.87
4412 4504 3.376546 GTGGCCTCAACTGAATCTTCATC 59.623 47.826 3.32 0.00 36.46 2.92
4413 4505 3.265221 TGGCCTCAACTGAATCTTCATCT 59.735 43.478 3.32 0.00 36.46 2.90
4414 4506 4.263639 TGGCCTCAACTGAATCTTCATCTT 60.264 41.667 3.32 0.00 36.46 2.40
4416 4508 5.882557 GGCCTCAACTGAATCTTCATCTTAA 59.117 40.000 0.00 0.00 36.46 1.85
4444 4544 3.181509 GCAGCAGTGACATCAGATTCTTG 60.182 47.826 0.00 0.00 0.00 3.02
4464 4564 4.101448 CCGGTGCCTCCCTTCCTG 62.101 72.222 0.00 0.00 0.00 3.86
4465 4565 4.785453 CGGTGCCTCCCTTCCTGC 62.785 72.222 0.00 0.00 0.00 4.85
4466 4566 4.785453 GGTGCCTCCCTTCCTGCG 62.785 72.222 0.00 0.00 0.00 5.18
4467 4567 3.706373 GTGCCTCCCTTCCTGCGA 61.706 66.667 0.00 0.00 0.00 5.10
4468 4568 2.927856 TGCCTCCCTTCCTGCGAA 60.928 61.111 0.00 0.00 0.00 4.70
4593 4718 0.743701 CCTCTGGCATGAGTGAGTGC 60.744 60.000 0.00 0.00 40.55 4.40
4594 4719 1.079612 TCTGGCATGAGTGAGTGCG 60.080 57.895 0.00 0.00 42.15 5.34
4595 4720 1.375140 CTGGCATGAGTGAGTGCGT 60.375 57.895 0.00 0.00 42.15 5.24
4597 4722 2.477845 GCATGAGTGAGTGCGTGC 59.522 61.111 0.00 0.00 39.51 5.34
4660 4795 1.596934 CCACCACCGCTGTCTGTAT 59.403 57.895 0.00 0.00 0.00 2.29
4866 5020 4.421948 CGTTGAGTACACTAATCCTCCAC 58.578 47.826 0.00 0.00 0.00 4.02
4875 5029 5.070685 ACACTAATCCTCCACAAAAAGGAC 58.929 41.667 0.00 0.00 44.26 3.85
4920 5077 2.145536 CACCACACTTAAACCCGTACC 58.854 52.381 0.00 0.00 0.00 3.34
4970 5133 4.772886 ACGCCAAGGTTAGATAAGGATT 57.227 40.909 0.00 0.00 0.00 3.01
4971 5134 4.451900 ACGCCAAGGTTAGATAAGGATTG 58.548 43.478 0.00 0.00 0.00 2.67
4972 5135 3.251004 CGCCAAGGTTAGATAAGGATTGC 59.749 47.826 0.00 0.00 0.00 3.56
4980 5143 5.698545 GGTTAGATAAGGATTGCTGCTACTG 59.301 44.000 0.00 0.00 0.00 2.74
5012 5175 4.583489 GTCCTCAGACCGGACTATCATAAA 59.417 45.833 9.46 0.00 45.87 1.40
5015 5178 3.640029 TCAGACCGGACTATCATAAACCC 59.360 47.826 9.46 0.00 0.00 4.11
5016 5179 2.970640 AGACCGGACTATCATAAACCCC 59.029 50.000 9.46 0.00 0.00 4.95
5021 5184 4.386711 CGGACTATCATAAACCCCTTTCC 58.613 47.826 0.00 0.00 0.00 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.886313 CTATGGTGCTGCGAGCCTG 60.886 63.158 8.69 0.00 41.51 4.85
4 5 2.503061 CTATGGTGCTGCGAGCCT 59.497 61.111 8.69 0.00 41.51 4.58
5 6 2.590007 CCTATGGTGCTGCGAGCC 60.590 66.667 5.82 0.00 41.51 4.70
6 7 1.884926 GTCCTATGGTGCTGCGAGC 60.885 63.158 0.00 1.70 42.82 5.03
7 8 0.807667 GTGTCCTATGGTGCTGCGAG 60.808 60.000 0.00 0.00 0.00 5.03
8 9 1.218047 GTGTCCTATGGTGCTGCGA 59.782 57.895 0.00 0.00 0.00 5.10
9 10 0.673333 TTGTGTCCTATGGTGCTGCG 60.673 55.000 0.00 0.00 0.00 5.18
10 11 1.533625 TTTGTGTCCTATGGTGCTGC 58.466 50.000 0.00 0.00 0.00 5.25
11 12 3.057315 CCTTTTTGTGTCCTATGGTGCTG 60.057 47.826 0.00 0.00 0.00 4.41
12 13 3.157087 CCTTTTTGTGTCCTATGGTGCT 58.843 45.455 0.00 0.00 0.00 4.40
13 14 3.153919 TCCTTTTTGTGTCCTATGGTGC 58.846 45.455 0.00 0.00 0.00 5.01
14 15 4.218417 CCTTCCTTTTTGTGTCCTATGGTG 59.782 45.833 0.00 0.00 0.00 4.17
15 16 4.407365 CCTTCCTTTTTGTGTCCTATGGT 58.593 43.478 0.00 0.00 0.00 3.55
16 17 3.763897 CCCTTCCTTTTTGTGTCCTATGG 59.236 47.826 0.00 0.00 0.00 2.74
17 18 4.662278 TCCCTTCCTTTTTGTGTCCTATG 58.338 43.478 0.00 0.00 0.00 2.23
18 19 5.074515 TCTTCCCTTCCTTTTTGTGTCCTAT 59.925 40.000 0.00 0.00 0.00 2.57
19 20 4.414182 TCTTCCCTTCCTTTTTGTGTCCTA 59.586 41.667 0.00 0.00 0.00 2.94
20 21 3.204382 TCTTCCCTTCCTTTTTGTGTCCT 59.796 43.478 0.00 0.00 0.00 3.85
21 22 3.562182 TCTTCCCTTCCTTTTTGTGTCC 58.438 45.455 0.00 0.00 0.00 4.02
22 23 4.887655 TCTTCTTCCCTTCCTTTTTGTGTC 59.112 41.667 0.00 0.00 0.00 3.67
23 24 4.867086 TCTTCTTCCCTTCCTTTTTGTGT 58.133 39.130 0.00 0.00 0.00 3.72
24 25 4.279420 CCTCTTCTTCCCTTCCTTTTTGTG 59.721 45.833 0.00 0.00 0.00 3.33
25 26 4.474394 CCTCTTCTTCCCTTCCTTTTTGT 58.526 43.478 0.00 0.00 0.00 2.83
26 27 3.829026 CCCTCTTCTTCCCTTCCTTTTTG 59.171 47.826 0.00 0.00 0.00 2.44
27 28 3.181417 CCCCTCTTCTTCCCTTCCTTTTT 60.181 47.826 0.00 0.00 0.00 1.94
28 29 2.380249 CCCCTCTTCTTCCCTTCCTTTT 59.620 50.000 0.00 0.00 0.00 2.27
29 30 1.996291 CCCCTCTTCTTCCCTTCCTTT 59.004 52.381 0.00 0.00 0.00 3.11
30 31 1.675007 CCCCTCTTCTTCCCTTCCTT 58.325 55.000 0.00 0.00 0.00 3.36
31 32 0.253394 CCCCCTCTTCTTCCCTTCCT 60.253 60.000 0.00 0.00 0.00 3.36
32 33 2.312323 CCCCCTCTTCTTCCCTTCC 58.688 63.158 0.00 0.00 0.00 3.46
49 50 4.329545 TTGTGGTCCTGCGCTCCC 62.330 66.667 9.73 3.46 0.00 4.30
50 51 2.743928 CTTGTGGTCCTGCGCTCC 60.744 66.667 9.73 6.75 0.00 4.70
51 52 2.743928 CCTTGTGGTCCTGCGCTC 60.744 66.667 9.73 0.00 0.00 5.03
52 53 4.335647 CCCTTGTGGTCCTGCGCT 62.336 66.667 9.73 0.00 0.00 5.92
54 55 4.641645 TGCCCTTGTGGTCCTGCG 62.642 66.667 0.00 0.00 36.04 5.18
55 56 2.674380 CTGCCCTTGTGGTCCTGC 60.674 66.667 0.00 0.00 36.04 4.85
56 57 0.178992 TTTCTGCCCTTGTGGTCCTG 60.179 55.000 0.00 0.00 36.04 3.86
57 58 0.555769 TTTTCTGCCCTTGTGGTCCT 59.444 50.000 0.00 0.00 36.04 3.85
58 59 0.961753 CTTTTCTGCCCTTGTGGTCC 59.038 55.000 0.00 0.00 36.04 4.46
59 60 0.961753 CCTTTTCTGCCCTTGTGGTC 59.038 55.000 0.00 0.00 36.04 4.02
60 61 0.469892 CCCTTTTCTGCCCTTGTGGT 60.470 55.000 0.00 0.00 36.04 4.16
61 62 1.187567 CCCCTTTTCTGCCCTTGTGG 61.188 60.000 0.00 0.00 37.09 4.17
62 63 1.187567 CCCCCTTTTCTGCCCTTGTG 61.188 60.000 0.00 0.00 0.00 3.33
63 64 1.156095 CCCCCTTTTCTGCCCTTGT 59.844 57.895 0.00 0.00 0.00 3.16
64 65 2.285773 GCCCCCTTTTCTGCCCTTG 61.286 63.158 0.00 0.00 0.00 3.61
65 66 2.120496 GCCCCCTTTTCTGCCCTT 59.880 61.111 0.00 0.00 0.00 3.95
66 67 3.997952 GGCCCCCTTTTCTGCCCT 61.998 66.667 0.00 0.00 37.94 5.19
70 71 4.759205 CCCCGGCCCCCTTTTCTG 62.759 72.222 0.00 0.00 0.00 3.02
97 98 2.824041 CTATGTGGTGGCCGTGGC 60.824 66.667 1.16 1.16 41.06 5.01
98 99 2.824041 GCTATGTGGTGGCCGTGG 60.824 66.667 0.00 0.00 0.00 4.94
99 100 2.046411 TGCTATGTGGTGGCCGTG 60.046 61.111 0.00 0.00 32.50 4.94
100 101 1.836999 TTCTGCTATGTGGTGGCCGT 61.837 55.000 0.00 0.00 32.50 5.68
101 102 1.078497 TTCTGCTATGTGGTGGCCG 60.078 57.895 0.00 0.00 32.50 6.13
102 103 0.749454 CCTTCTGCTATGTGGTGGCC 60.749 60.000 0.00 0.00 32.50 5.36
103 104 0.253044 TCCTTCTGCTATGTGGTGGC 59.747 55.000 0.00 0.00 34.40 5.01
104 105 1.833630 TCTCCTTCTGCTATGTGGTGG 59.166 52.381 0.00 0.00 0.00 4.61
105 106 2.158986 CCTCTCCTTCTGCTATGTGGTG 60.159 54.545 0.00 0.00 0.00 4.17
106 107 2.114616 CCTCTCCTTCTGCTATGTGGT 58.885 52.381 0.00 0.00 0.00 4.16
107 108 2.364970 CTCCTCTCCTTCTGCTATGTGG 59.635 54.545 0.00 0.00 0.00 4.17
108 109 2.364970 CCTCCTCTCCTTCTGCTATGTG 59.635 54.545 0.00 0.00 0.00 3.21
109 110 2.676748 CCTCCTCTCCTTCTGCTATGT 58.323 52.381 0.00 0.00 0.00 2.29
110 111 1.344114 GCCTCCTCTCCTTCTGCTATG 59.656 57.143 0.00 0.00 0.00 2.23
111 112 1.715785 GCCTCCTCTCCTTCTGCTAT 58.284 55.000 0.00 0.00 0.00 2.97
112 113 0.753479 CGCCTCCTCTCCTTCTGCTA 60.753 60.000 0.00 0.00 0.00 3.49
113 114 2.057408 CGCCTCCTCTCCTTCTGCT 61.057 63.158 0.00 0.00 0.00 4.24
114 115 2.015227 CTCGCCTCCTCTCCTTCTGC 62.015 65.000 0.00 0.00 0.00 4.26
115 116 2.015227 GCTCGCCTCCTCTCCTTCTG 62.015 65.000 0.00 0.00 0.00 3.02
116 117 1.756561 GCTCGCCTCCTCTCCTTCT 60.757 63.158 0.00 0.00 0.00 2.85
117 118 2.791868 GGCTCGCCTCCTCTCCTTC 61.792 68.421 0.00 0.00 0.00 3.46
118 119 2.762043 GGCTCGCCTCCTCTCCTT 60.762 66.667 0.00 0.00 0.00 3.36
119 120 3.749870 AGGCTCGCCTCCTCTCCT 61.750 66.667 4.23 0.00 44.43 3.69
128 129 0.814457 AGATATCGATGAGGCTCGCC 59.186 55.000 8.54 0.00 38.52 5.54
129 130 1.530852 CGAGATATCGATGAGGCTCGC 60.531 57.143 19.99 3.51 38.73 5.03
130 131 2.003301 TCGAGATATCGATGAGGCTCG 58.997 52.381 23.15 23.15 44.55 5.03
139 140 1.541588 CTGCCACCATCGAGATATCGA 59.458 52.381 15.67 15.67 46.58 3.59
140 141 1.988063 CTGCCACCATCGAGATATCG 58.012 55.000 2.64 2.64 0.00 2.92
141 142 1.674221 GGCTGCCACCATCGAGATATC 60.674 57.143 15.17 0.00 0.00 1.63
142 143 0.322975 GGCTGCCACCATCGAGATAT 59.677 55.000 15.17 0.00 0.00 1.63
143 144 1.048160 TGGCTGCCACCATCGAGATA 61.048 55.000 19.30 0.00 33.75 1.98
144 145 2.369633 TGGCTGCCACCATCGAGAT 61.370 57.895 19.30 0.00 33.75 2.75
145 146 3.002583 TGGCTGCCACCATCGAGA 61.003 61.111 19.30 0.00 33.75 4.04
155 156 4.802051 TTCTCCGCCATGGCTGCC 62.802 66.667 33.07 12.87 39.32 4.85
156 157 2.751436 TTTCTCCGCCATGGCTGC 60.751 61.111 33.07 8.82 39.32 5.25
157 158 2.117156 CCTTTCTCCGCCATGGCTG 61.117 63.158 33.07 27.27 39.32 4.85
158 159 2.273449 CCTTTCTCCGCCATGGCT 59.727 61.111 33.07 0.00 39.32 4.75
159 160 2.830370 CCCTTTCTCCGCCATGGC 60.830 66.667 27.67 27.67 37.80 4.40
160 161 2.124151 CCCCTTTCTCCGCCATGG 60.124 66.667 7.63 7.63 40.09 3.66
161 162 2.124151 CCCCCTTTCTCCGCCATG 60.124 66.667 0.00 0.00 0.00 3.66
162 163 2.614013 ACCCCCTTTCTCCGCCAT 60.614 61.111 0.00 0.00 0.00 4.40
163 164 3.646715 CACCCCCTTTCTCCGCCA 61.647 66.667 0.00 0.00 0.00 5.69
164 165 3.647771 ACACCCCCTTTCTCCGCC 61.648 66.667 0.00 0.00 0.00 6.13
165 166 2.359975 CACACCCCCTTTCTCCGC 60.360 66.667 0.00 0.00 0.00 5.54
166 167 2.351276 CCACACCCCCTTTCTCCG 59.649 66.667 0.00 0.00 0.00 4.63
167 168 2.763902 CCCACACCCCCTTTCTCC 59.236 66.667 0.00 0.00 0.00 3.71
168 169 1.432023 TTCCCCACACCCCCTTTCTC 61.432 60.000 0.00 0.00 0.00 2.87
169 170 1.002242 TTTCCCCACACCCCCTTTCT 61.002 55.000 0.00 0.00 0.00 2.52
170 171 0.105401 TTTTCCCCACACCCCCTTTC 60.105 55.000 0.00 0.00 0.00 2.62
171 172 0.105194 CTTTTCCCCACACCCCCTTT 60.105 55.000 0.00 0.00 0.00 3.11
172 173 1.002242 TCTTTTCCCCACACCCCCTT 61.002 55.000 0.00 0.00 0.00 3.95
173 174 1.002242 TTCTTTTCCCCACACCCCCT 61.002 55.000 0.00 0.00 0.00 4.79
174 175 0.116342 ATTCTTTTCCCCACACCCCC 59.884 55.000 0.00 0.00 0.00 5.40
175 176 1.203125 TGATTCTTTTCCCCACACCCC 60.203 52.381 0.00 0.00 0.00 4.95
176 177 2.171003 CTGATTCTTTTCCCCACACCC 58.829 52.381 0.00 0.00 0.00 4.61
177 178 3.084786 CTCTGATTCTTTTCCCCACACC 58.915 50.000 0.00 0.00 0.00 4.16
178 179 4.021102 TCTCTGATTCTTTTCCCCACAC 57.979 45.455 0.00 0.00 0.00 3.82
179 180 4.507335 CCTTCTCTGATTCTTTTCCCCACA 60.507 45.833 0.00 0.00 0.00 4.17
180 181 4.013050 CCTTCTCTGATTCTTTTCCCCAC 58.987 47.826 0.00 0.00 0.00 4.61
181 182 3.916349 TCCTTCTCTGATTCTTTTCCCCA 59.084 43.478 0.00 0.00 0.00 4.96
182 183 4.576330 TCCTTCTCTGATTCTTTTCCCC 57.424 45.455 0.00 0.00 0.00 4.81
183 184 5.810095 TCTTCCTTCTCTGATTCTTTTCCC 58.190 41.667 0.00 0.00 0.00 3.97
184 185 7.108847 TCATCTTCCTTCTCTGATTCTTTTCC 58.891 38.462 0.00 0.00 0.00 3.13
185 186 7.280652 CCTCATCTTCCTTCTCTGATTCTTTTC 59.719 40.741 0.00 0.00 0.00 2.29
186 187 7.111466 CCTCATCTTCCTTCTCTGATTCTTTT 58.889 38.462 0.00 0.00 0.00 2.27
187 188 6.352910 CCCTCATCTTCCTTCTCTGATTCTTT 60.353 42.308 0.00 0.00 0.00 2.52
188 189 5.130809 CCCTCATCTTCCTTCTCTGATTCTT 59.869 44.000 0.00 0.00 0.00 2.52
189 190 4.655186 CCCTCATCTTCCTTCTCTGATTCT 59.345 45.833 0.00 0.00 0.00 2.40
190 191 4.653341 TCCCTCATCTTCCTTCTCTGATTC 59.347 45.833 0.00 0.00 0.00 2.52
191 192 4.629122 TCCCTCATCTTCCTTCTCTGATT 58.371 43.478 0.00 0.00 0.00 2.57
192 193 4.277788 TCCCTCATCTTCCTTCTCTGAT 57.722 45.455 0.00 0.00 0.00 2.90
193 194 3.765432 TCCCTCATCTTCCTTCTCTGA 57.235 47.619 0.00 0.00 0.00 3.27
194 195 3.966006 TCATCCCTCATCTTCCTTCTCTG 59.034 47.826 0.00 0.00 0.00 3.35
195 196 4.225573 CTCATCCCTCATCTTCCTTCTCT 58.774 47.826 0.00 0.00 0.00 3.10
196 197 3.966665 ACTCATCCCTCATCTTCCTTCTC 59.033 47.826 0.00 0.00 0.00 2.87
197 198 3.710677 CACTCATCCCTCATCTTCCTTCT 59.289 47.826 0.00 0.00 0.00 2.85
198 199 3.743899 GCACTCATCCCTCATCTTCCTTC 60.744 52.174 0.00 0.00 0.00 3.46
199 200 2.172293 GCACTCATCCCTCATCTTCCTT 59.828 50.000 0.00 0.00 0.00 3.36
200 201 1.767681 GCACTCATCCCTCATCTTCCT 59.232 52.381 0.00 0.00 0.00 3.36
201 202 1.539929 CGCACTCATCCCTCATCTTCC 60.540 57.143 0.00 0.00 0.00 3.46
202 203 1.137872 ACGCACTCATCCCTCATCTTC 59.862 52.381 0.00 0.00 0.00 2.87
203 204 1.134580 CACGCACTCATCCCTCATCTT 60.135 52.381 0.00 0.00 0.00 2.40
204 205 0.463204 CACGCACTCATCCCTCATCT 59.537 55.000 0.00 0.00 0.00 2.90
205 206 0.531532 CCACGCACTCATCCCTCATC 60.532 60.000 0.00 0.00 0.00 2.92
206 207 0.977627 TCCACGCACTCATCCCTCAT 60.978 55.000 0.00 0.00 0.00 2.90
207 208 0.977627 ATCCACGCACTCATCCCTCA 60.978 55.000 0.00 0.00 0.00 3.86
208 209 0.531532 CATCCACGCACTCATCCCTC 60.532 60.000 0.00 0.00 0.00 4.30
209 210 1.524002 CATCCACGCACTCATCCCT 59.476 57.895 0.00 0.00 0.00 4.20
210 211 1.524621 CCATCCACGCACTCATCCC 60.525 63.158 0.00 0.00 0.00 3.85
211 212 0.107456 ATCCATCCACGCACTCATCC 59.893 55.000 0.00 0.00 0.00 3.51
212 213 2.820059 TATCCATCCACGCACTCATC 57.180 50.000 0.00 0.00 0.00 2.92
213 214 2.224378 CCTTATCCATCCACGCACTCAT 60.224 50.000 0.00 0.00 0.00 2.90
214 215 1.138859 CCTTATCCATCCACGCACTCA 59.861 52.381 0.00 0.00 0.00 3.41
215 216 1.541233 CCCTTATCCATCCACGCACTC 60.541 57.143 0.00 0.00 0.00 3.51
216 217 0.469917 CCCTTATCCATCCACGCACT 59.530 55.000 0.00 0.00 0.00 4.40
217 218 0.468226 TCCCTTATCCATCCACGCAC 59.532 55.000 0.00 0.00 0.00 5.34
218 219 1.208706 TTCCCTTATCCATCCACGCA 58.791 50.000 0.00 0.00 0.00 5.24
219 220 2.222027 CTTTCCCTTATCCATCCACGC 58.778 52.381 0.00 0.00 0.00 5.34
220 221 2.172717 ACCTTTCCCTTATCCATCCACG 59.827 50.000 0.00 0.00 0.00 4.94
221 222 3.555966 CACCTTTCCCTTATCCATCCAC 58.444 50.000 0.00 0.00 0.00 4.02
222 223 2.513738 CCACCTTTCCCTTATCCATCCA 59.486 50.000 0.00 0.00 0.00 3.41
223 224 2.158460 CCCACCTTTCCCTTATCCATCC 60.158 54.545 0.00 0.00 0.00 3.51
224 225 2.753168 GCCCACCTTTCCCTTATCCATC 60.753 54.545 0.00 0.00 0.00 3.51
225 226 1.217942 GCCCACCTTTCCCTTATCCAT 59.782 52.381 0.00 0.00 0.00 3.41
226 227 0.629058 GCCCACCTTTCCCTTATCCA 59.371 55.000 0.00 0.00 0.00 3.41
227 228 0.465642 CGCCCACCTTTCCCTTATCC 60.466 60.000 0.00 0.00 0.00 2.59
228 229 0.465642 CCGCCCACCTTTCCCTTATC 60.466 60.000 0.00 0.00 0.00 1.75
229 230 1.212250 ACCGCCCACCTTTCCCTTAT 61.212 55.000 0.00 0.00 0.00 1.73
230 231 1.848895 ACCGCCCACCTTTCCCTTA 60.849 57.895 0.00 0.00 0.00 2.69
231 232 3.182996 ACCGCCCACCTTTCCCTT 61.183 61.111 0.00 0.00 0.00 3.95
232 233 3.966543 CACCGCCCACCTTTCCCT 61.967 66.667 0.00 0.00 0.00 4.20
246 247 4.910585 CTATGGGACCCGCGCACC 62.911 72.222 8.75 4.70 42.69 5.01
247 248 3.379865 TTCTATGGGACCCGCGCAC 62.380 63.158 8.75 0.00 42.69 5.34
248 249 3.078196 TTCTATGGGACCCGCGCA 61.078 61.111 8.75 0.00 44.12 6.09
249 250 2.588034 GTTCTATGGGACCCGCGC 60.588 66.667 5.91 0.00 0.00 6.86
250 251 1.520787 GTGTTCTATGGGACCCGCG 60.521 63.158 5.91 0.00 0.00 6.46
251 252 0.035820 TTGTGTTCTATGGGACCCGC 60.036 55.000 5.91 0.00 0.00 6.13
252 253 1.734163 GTTGTGTTCTATGGGACCCG 58.266 55.000 5.91 0.00 0.00 5.28
253 254 1.002773 ACGTTGTGTTCTATGGGACCC 59.997 52.381 2.45 2.45 0.00 4.46
254 255 2.467566 ACGTTGTGTTCTATGGGACC 57.532 50.000 0.00 0.00 0.00 4.46
255 256 4.184079 ACTACGTTGTGTTCTATGGGAC 57.816 45.455 0.73 0.00 0.00 4.46
256 257 4.766373 TGTACTACGTTGTGTTCTATGGGA 59.234 41.667 13.03 0.00 0.00 4.37
257 258 5.063180 TGTACTACGTTGTGTTCTATGGG 57.937 43.478 13.03 0.00 0.00 4.00
258 259 5.060077 CGTTGTACTACGTTGTGTTCTATGG 59.940 44.000 19.60 0.00 36.80 2.74
259 260 6.062602 CGTTGTACTACGTTGTGTTCTATG 57.937 41.667 19.60 2.96 36.80 2.23
271 272 2.655474 GCTTCTCACACGTTGTACTACG 59.345 50.000 24.77 24.77 46.52 3.51
272 273 3.635331 TGCTTCTCACACGTTGTACTAC 58.365 45.455 0.00 0.00 0.00 2.73
273 274 3.305131 CCTGCTTCTCACACGTTGTACTA 60.305 47.826 0.00 0.00 0.00 1.82
274 275 2.545952 CCTGCTTCTCACACGTTGTACT 60.546 50.000 0.00 0.00 0.00 2.73
275 276 1.792949 CCTGCTTCTCACACGTTGTAC 59.207 52.381 0.00 0.00 0.00 2.90
276 277 1.684450 TCCTGCTTCTCACACGTTGTA 59.316 47.619 0.00 0.00 0.00 2.41
277 278 0.464036 TCCTGCTTCTCACACGTTGT 59.536 50.000 0.00 0.00 0.00 3.32
278 279 0.861837 GTCCTGCTTCTCACACGTTG 59.138 55.000 0.00 0.00 0.00 4.10
279 280 0.597637 CGTCCTGCTTCTCACACGTT 60.598 55.000 0.00 0.00 0.00 3.99
280 281 1.007271 CGTCCTGCTTCTCACACGT 60.007 57.895 0.00 0.00 0.00 4.49
281 282 2.375766 GCGTCCTGCTTCTCACACG 61.376 63.158 0.00 0.00 41.73 4.49
282 283 2.375766 CGCGTCCTGCTTCTCACAC 61.376 63.158 0.00 0.00 43.27 3.82
283 284 2.049156 CGCGTCCTGCTTCTCACA 60.049 61.111 0.00 0.00 43.27 3.58
284 285 1.618640 GAACGCGTCCTGCTTCTCAC 61.619 60.000 14.44 0.00 43.27 3.51
285 286 1.372997 GAACGCGTCCTGCTTCTCA 60.373 57.895 14.44 0.00 43.27 3.27
286 287 2.437343 CGAACGCGTCCTGCTTCTC 61.437 63.158 14.44 2.10 43.27 2.87
287 288 2.214181 ATCGAACGCGTCCTGCTTCT 62.214 55.000 14.44 0.00 43.27 2.85
288 289 1.743855 GATCGAACGCGTCCTGCTTC 61.744 60.000 14.44 3.85 43.27 3.86
289 290 1.805945 GATCGAACGCGTCCTGCTT 60.806 57.895 14.44 0.00 43.27 3.91
290 291 2.202623 GATCGAACGCGTCCTGCT 60.203 61.111 14.44 0.00 43.27 4.24
291 292 3.607987 CGATCGAACGCGTCCTGC 61.608 66.667 14.44 1.29 38.98 4.85
292 293 2.949678 CCGATCGAACGCGTCCTG 60.950 66.667 18.66 5.48 38.98 3.86
293 294 3.437795 ACCGATCGAACGCGTCCT 61.438 61.111 18.66 0.00 38.98 3.85
294 295 3.245315 CACCGATCGAACGCGTCC 61.245 66.667 18.66 0.00 38.98 4.79
295 296 2.503375 ACACCGATCGAACGCGTC 60.503 61.111 18.66 5.31 38.98 5.19
296 297 2.803670 CACACCGATCGAACGCGT 60.804 61.111 18.66 5.58 38.98 6.01
297 298 2.369629 AACACACCGATCGAACGCG 61.370 57.895 18.66 3.53 39.35 6.01
298 299 1.129809 CAACACACCGATCGAACGC 59.870 57.895 18.66 0.00 0.00 4.84
299 300 1.129809 GCAACACACCGATCGAACG 59.870 57.895 18.66 8.26 0.00 3.95
300 301 0.796312 ATGCAACACACCGATCGAAC 59.204 50.000 18.66 0.00 0.00 3.95
301 302 2.267426 CTATGCAACACACCGATCGAA 58.733 47.619 18.66 0.00 0.00 3.71
302 303 1.203758 ACTATGCAACACACCGATCGA 59.796 47.619 18.66 0.00 0.00 3.59
303 304 1.640428 ACTATGCAACACACCGATCG 58.360 50.000 8.51 8.51 0.00 3.69
304 305 2.534349 CGTACTATGCAACACACCGATC 59.466 50.000 0.00 0.00 0.00 3.69
305 306 2.094390 ACGTACTATGCAACACACCGAT 60.094 45.455 0.00 0.00 0.00 4.18
306 307 1.270274 ACGTACTATGCAACACACCGA 59.730 47.619 0.00 0.00 0.00 4.69
307 308 1.388768 CACGTACTATGCAACACACCG 59.611 52.381 0.00 0.00 0.00 4.94
308 309 1.127951 GCACGTACTATGCAACACACC 59.872 52.381 12.65 0.00 42.88 4.16
309 310 1.127951 GGCACGTACTATGCAACACAC 59.872 52.381 17.65 0.00 45.27 3.82
310 311 1.434555 GGCACGTACTATGCAACACA 58.565 50.000 17.65 0.00 45.27 3.72
332 333 4.778143 AGATTGGGCCGGTCGCAC 62.778 66.667 13.63 5.59 43.39 5.34
333 334 3.969250 GAAGATTGGGCCGGTCGCA 62.969 63.158 1.90 7.47 40.31 5.10
334 335 3.202706 GAAGATTGGGCCGGTCGC 61.203 66.667 1.90 4.53 0.00 5.19
335 336 2.890474 CGAAGATTGGGCCGGTCG 60.890 66.667 1.90 0.00 0.00 4.79
336 337 2.513897 CCGAAGATTGGGCCGGTC 60.514 66.667 1.90 0.00 37.40 4.79
337 338 4.796495 GCCGAAGATTGGGCCGGT 62.796 66.667 1.90 0.00 45.11 5.28
359 360 2.061182 TAAACGTTTGTGGCCGGTGC 62.061 55.000 23.46 0.00 0.00 5.01
360 361 0.317186 GTAAACGTTTGTGGCCGGTG 60.317 55.000 23.46 0.00 0.00 4.94
361 362 1.446516 GGTAAACGTTTGTGGCCGGT 61.447 55.000 23.46 0.00 0.00 5.28
362 363 1.283487 GGTAAACGTTTGTGGCCGG 59.717 57.895 23.46 0.00 0.00 6.13
363 364 0.381089 TTGGTAAACGTTTGTGGCCG 59.619 50.000 23.46 0.00 0.00 6.13
364 365 2.804697 ATTGGTAAACGTTTGTGGCC 57.195 45.000 23.46 18.11 0.00 5.36
365 366 9.012448 GTATTATTATTGGTAAACGTTTGTGGC 57.988 33.333 23.46 10.32 0.00 5.01
368 369 9.777575 GCTGTATTATTATTGGTAAACGTTTGT 57.222 29.630 23.46 0.05 0.00 2.83
369 370 9.228636 GGCTGTATTATTATTGGTAAACGTTTG 57.771 33.333 23.46 1.49 0.00 2.93
370 371 9.181061 AGGCTGTATTATTATTGGTAAACGTTT 57.819 29.630 18.90 18.90 0.00 3.60
371 372 8.617809 CAGGCTGTATTATTATTGGTAAACGTT 58.382 33.333 6.28 0.00 0.00 3.99
372 373 7.988599 TCAGGCTGTATTATTATTGGTAAACGT 59.011 33.333 15.27 0.00 0.00 3.99
373 374 8.373048 TCAGGCTGTATTATTATTGGTAAACG 57.627 34.615 15.27 0.00 0.00 3.60
376 377 9.515226 GGATTCAGGCTGTATTATTATTGGTAA 57.485 33.333 15.27 0.00 0.00 2.85
377 378 8.107095 GGGATTCAGGCTGTATTATTATTGGTA 58.893 37.037 15.27 0.00 0.00 3.25
378 379 6.948309 GGGATTCAGGCTGTATTATTATTGGT 59.052 38.462 15.27 0.00 0.00 3.67
379 380 6.094048 CGGGATTCAGGCTGTATTATTATTGG 59.906 42.308 15.27 0.00 0.00 3.16
380 381 6.094048 CCGGGATTCAGGCTGTATTATTATTG 59.906 42.308 15.27 0.00 0.00 1.90
385 386 2.979678 ACCGGGATTCAGGCTGTATTAT 59.020 45.455 15.27 4.28 0.00 1.28
388 389 0.469917 CACCGGGATTCAGGCTGTAT 59.530 55.000 15.27 10.74 0.00 2.29
401 402 1.266175 CTCTACTATACGTGCACCGGG 59.734 57.143 12.15 0.00 42.24 5.73
414 415 5.814764 ATCTTTTCTCGCGTTCTCTACTA 57.185 39.130 5.77 0.00 0.00 1.82
416 417 4.265792 GGAATCTTTTCTCGCGTTCTCTAC 59.734 45.833 5.77 0.00 32.16 2.59
417 418 4.158025 AGGAATCTTTTCTCGCGTTCTCTA 59.842 41.667 5.77 0.00 32.16 2.43
419 420 3.061429 CAGGAATCTTTTCTCGCGTTCTC 59.939 47.826 5.77 0.00 32.16 2.87
420 421 2.996621 CAGGAATCTTTTCTCGCGTTCT 59.003 45.455 5.77 0.00 32.16 3.01
421 422 2.474691 GCAGGAATCTTTTCTCGCGTTC 60.475 50.000 5.77 0.00 32.16 3.95
424 425 1.325943 GAGCAGGAATCTTTTCTCGCG 59.674 52.381 0.00 0.00 35.49 5.87
425 426 1.668237 GGAGCAGGAATCTTTTCTCGC 59.332 52.381 0.00 0.00 32.16 5.03
426 427 2.284190 GGGAGCAGGAATCTTTTCTCG 58.716 52.381 0.00 0.00 32.16 4.04
427 428 2.649190 GGGGAGCAGGAATCTTTTCTC 58.351 52.381 0.00 0.00 32.16 2.87
428 429 1.065126 CGGGGAGCAGGAATCTTTTCT 60.065 52.381 0.00 0.00 32.16 2.52
429 430 1.383523 CGGGGAGCAGGAATCTTTTC 58.616 55.000 0.00 0.00 0.00 2.29
489 490 1.534729 GCCAATTATAGGAAGGCGGG 58.465 55.000 0.00 0.00 35.42 6.13
566 567 2.561037 GGGGTTGGGTTGCGTCTTG 61.561 63.158 0.00 0.00 0.00 3.02
568 569 3.063197 TTGGGGTTGGGTTGCGTCT 62.063 57.895 0.00 0.00 0.00 4.18
571 572 3.611674 GGTTGGGGTTGGGTTGCG 61.612 66.667 0.00 0.00 0.00 4.85
572 573 3.238497 GGGTTGGGGTTGGGTTGC 61.238 66.667 0.00 0.00 0.00 4.17
573 574 1.383248 TTGGGTTGGGGTTGGGTTG 60.383 57.895 0.00 0.00 0.00 3.77
574 575 1.383386 GTTGGGTTGGGGTTGGGTT 60.383 57.895 0.00 0.00 0.00 4.11
576 577 2.525629 GGTTGGGTTGGGGTTGGG 60.526 66.667 0.00 0.00 0.00 4.12
577 578 2.525629 GGGTTGGGTTGGGGTTGG 60.526 66.667 0.00 0.00 0.00 3.77
584 585 2.601367 CTGGGCAGGGTTGGGTTG 60.601 66.667 0.00 0.00 0.00 3.77
586 587 0.849094 TATTCTGGGCAGGGTTGGGT 60.849 55.000 0.00 0.00 0.00 4.51
595 600 0.320858 TCGCGTGTTTATTCTGGGCA 60.321 50.000 5.77 0.00 0.00 5.36
620 625 1.755179 ATTGGGGAAATCTCGCTGTG 58.245 50.000 0.00 0.00 34.94 3.66
621 626 2.369394 GAATTGGGGAAATCTCGCTGT 58.631 47.619 0.00 0.00 34.94 4.40
623 628 1.566231 AGGAATTGGGGAAATCTCGCT 59.434 47.619 0.00 0.00 34.94 4.93
624 629 1.678101 CAGGAATTGGGGAAATCTCGC 59.322 52.381 0.00 0.00 0.00 5.03
626 631 2.954989 GAGCAGGAATTGGGGAAATCTC 59.045 50.000 0.00 0.00 0.00 2.75
628 633 2.034878 GGAGCAGGAATTGGGGAAATC 58.965 52.381 0.00 0.00 0.00 2.17
629 634 1.648037 AGGAGCAGGAATTGGGGAAAT 59.352 47.619 0.00 0.00 0.00 2.17
630 635 1.084018 AGGAGCAGGAATTGGGGAAA 58.916 50.000 0.00 0.00 0.00 3.13
631 636 1.084018 AAGGAGCAGGAATTGGGGAA 58.916 50.000 0.00 0.00 0.00 3.97
632 637 0.332632 CAAGGAGCAGGAATTGGGGA 59.667 55.000 0.00 0.00 0.00 4.81
633 638 1.325476 GCAAGGAGCAGGAATTGGGG 61.325 60.000 0.00 0.00 44.79 4.96
773 785 0.031449 GAAGGAATCGGGAGCTCGAG 59.969 60.000 8.45 8.45 42.69 4.04
913 954 2.431057 AGCCTCTTAACTATCCACACCG 59.569 50.000 0.00 0.00 0.00 4.94
935 976 3.479269 CGAAACGCCGGAGCTCAC 61.479 66.667 17.19 4.01 36.60 3.51
942 983 2.995482 CTCGAATCGAAACGCCGG 59.005 61.111 6.84 0.00 34.74 6.13
944 985 1.631595 GAGCTCGAATCGAAACGCC 59.368 57.895 6.84 0.00 34.74 5.68
945 986 1.267228 CGAGCTCGAATCGAAACGC 59.733 57.895 32.06 7.04 42.76 4.84
946 987 0.562044 GACGAGCTCGAATCGAAACG 59.438 55.000 40.58 12.89 42.76 3.60
947 988 0.562044 CGACGAGCTCGAATCGAAAC 59.438 55.000 40.58 18.37 46.14 2.78
948 989 0.522705 CCGACGAGCTCGAATCGAAA 60.523 55.000 36.14 0.00 46.14 3.46
949 990 1.062047 CCGACGAGCTCGAATCGAA 59.938 57.895 36.14 0.00 46.14 3.71
970 1011 1.304217 TCCGAGACGCTCTTCCCTT 60.304 57.895 5.53 0.00 0.00 3.95
971 1012 2.047443 GTCCGAGACGCTCTTCCCT 61.047 63.158 5.53 0.00 0.00 4.20
972 1013 1.995646 GAGTCCGAGACGCTCTTCCC 61.996 65.000 5.53 0.00 37.67 3.97
1062 1109 4.493747 GAGCCCGGGTCGAACTCG 62.494 72.222 24.63 1.97 42.83 4.18
1284 1331 4.208686 GAGTGGGAGTAGCCGCCG 62.209 72.222 0.00 0.00 37.63 6.46
1285 1332 4.208686 CGAGTGGGAGTAGCCGCC 62.209 72.222 0.00 0.00 37.63 6.13
1286 1333 4.874977 GCGAGTGGGAGTAGCCGC 62.875 72.222 0.00 0.00 37.63 6.53
1287 1334 4.208686 GGCGAGTGGGAGTAGCCG 62.209 72.222 0.00 0.00 38.28 5.52
1359 1409 3.787001 GAGGACGGGCCCTGGAAG 61.787 72.222 22.43 6.07 36.49 3.46
1371 1421 3.462678 GAGGCCGGTGAGGAGGAC 61.463 72.222 1.90 0.00 45.00 3.85
1614 1667 4.776322 TGGAAGATGCGGTGGCGG 62.776 66.667 0.00 0.00 44.10 6.13
1644 1697 1.609320 GCCTCGAAGAAGGCTTTGACT 60.609 52.381 0.00 0.00 43.86 3.41
1647 1700 1.639298 CGGCCTCGAAGAAGGCTTTG 61.639 60.000 14.12 2.17 45.57 2.77
1650 1703 2.680352 TCGGCCTCGAAGAAGGCT 60.680 61.111 14.12 0.00 45.57 4.58
1714 1767 5.529581 TCAGAAATTTTTGAACAGGGGAC 57.470 39.130 8.86 0.00 0.00 4.46
1736 1789 7.881775 ACCAAAGGAGATTTAGCGATTAATT 57.118 32.000 0.00 0.00 0.00 1.40
1754 1809 5.348451 CACAGAACCAAAGAACAAACCAAAG 59.652 40.000 0.00 0.00 0.00 2.77
1900 1955 7.148523 ATGTGATCATAATCCACGAATGAATCG 60.149 37.037 0.00 0.00 43.88 3.34
1974 2029 4.559862 AAATCCACGAGAAGAGGAACAT 57.440 40.909 0.00 0.00 42.81 2.71
1998 2053 3.778075 TCCGAATCCCTCTAAACAATGGA 59.222 43.478 0.00 0.00 0.00 3.41
2040 2096 4.750098 AGGATACCAAAGAATACGAATGCG 59.250 41.667 0.00 0.00 40.31 4.73
2098 2154 3.499338 TGCAGGCCATCATAATTTAGGG 58.501 45.455 5.01 0.00 0.00 3.53
2099 2155 3.057033 GCTGCAGGCCATCATAATTTAGG 60.057 47.826 17.12 0.00 34.27 2.69
2129 2185 9.882996 CACATGATCATTTGCGTTAAATATAGT 57.117 29.630 5.16 0.00 36.87 2.12
2140 2196 3.297472 GAGATGCACATGATCATTTGCG 58.703 45.455 31.25 14.04 44.90 4.85
2159 2215 5.379706 AAGATAATGGAGGTGAAAGGGAG 57.620 43.478 0.00 0.00 0.00 4.30
2183 2239 9.023967 CATCCAACAGTTTTTATTAGCTAATGC 57.976 33.333 25.99 12.14 40.05 3.56
2313 2376 4.679654 GTGGTGATTTGAATTCGTTTGGAC 59.320 41.667 0.04 0.00 0.00 4.02
2357 2420 4.215109 ACCCATACTCCATGCCATAAAAC 58.785 43.478 0.00 0.00 32.84 2.43
2381 2444 6.150474 ACCAAAAGTATGAAACGGTAGATTGG 59.850 38.462 0.00 0.00 38.63 3.16
2450 2513 4.093556 GCTTCGAAACCTGAACAGATTAGG 59.906 45.833 0.00 0.00 37.61 2.69
2757 2820 1.135139 GATAGCTCCGTGTGCTCTTCA 59.865 52.381 0.00 0.00 41.46 3.02
2775 2838 3.941483 AGGTTTCTGCGAATTTCGATGAT 59.059 39.130 22.25 2.12 43.74 2.45
2781 2844 5.460646 TCATCAAAGGTTTCTGCGAATTTC 58.539 37.500 0.00 0.00 0.00 2.17
2830 2893 2.420687 CCCTAAGACCTTCATCCAGTGC 60.421 54.545 0.00 0.00 0.00 4.40
2989 3056 6.371271 GCCAAAACCAATTAGCAAACATACAT 59.629 34.615 0.00 0.00 0.00 2.29
3019 3086 5.886609 TCCATTGTCAAATTCTTCCTGGTA 58.113 37.500 0.00 0.00 0.00 3.25
3021 3088 5.419788 TCATCCATTGTCAAATTCTTCCTGG 59.580 40.000 0.00 0.00 0.00 4.45
3151 3218 1.542915 GGCCGCGATATGTAGTCCTTA 59.457 52.381 8.23 0.00 0.00 2.69
3253 3321 3.331150 CAATGAACGGTACCTGTAGCAA 58.669 45.455 10.90 0.00 33.46 3.91
3364 3434 2.048597 TTGTACCTCCAGTGCGCG 60.049 61.111 0.00 0.00 32.98 6.86
3439 3509 1.075542 CTTCGCATTGCCACGTAAGA 58.924 50.000 2.41 0.00 43.62 2.10
3478 3548 2.137523 TCGCTTTTTACTTGGGACGAC 58.862 47.619 0.00 0.00 0.00 4.34
3598 3668 1.728971 CTCACCTTGTCATGTTCGAGC 59.271 52.381 0.00 0.00 0.00 5.03
3654 3724 1.468054 GGCGTTGAAGATGATGGCAAC 60.468 52.381 0.00 0.00 37.76 4.17
3655 3725 0.810648 GGCGTTGAAGATGATGGCAA 59.189 50.000 0.00 0.00 0.00 4.52
3656 3726 1.368345 CGGCGTTGAAGATGATGGCA 61.368 55.000 0.00 0.00 0.00 4.92
3657 3727 1.089481 TCGGCGTTGAAGATGATGGC 61.089 55.000 6.85 0.00 0.00 4.40
3658 3728 1.528586 GATCGGCGTTGAAGATGATGG 59.471 52.381 6.85 0.00 0.00 3.51
3659 3729 2.204237 TGATCGGCGTTGAAGATGATG 58.796 47.619 6.85 0.00 0.00 3.07
3660 3730 2.602257 TGATCGGCGTTGAAGATGAT 57.398 45.000 6.85 0.00 0.00 2.45
3661 3731 2.101415 AGATGATCGGCGTTGAAGATGA 59.899 45.455 6.85 0.00 0.00 2.92
3662 3732 2.477825 AGATGATCGGCGTTGAAGATG 58.522 47.619 6.85 0.00 0.00 2.90
3663 3733 2.898729 AGATGATCGGCGTTGAAGAT 57.101 45.000 6.85 0.00 0.00 2.40
3664 3734 2.094234 TGAAGATGATCGGCGTTGAAGA 60.094 45.455 6.85 0.00 0.00 2.87
3665 3735 2.270923 TGAAGATGATCGGCGTTGAAG 58.729 47.619 6.85 0.00 0.00 3.02
3666 3736 2.270923 CTGAAGATGATCGGCGTTGAA 58.729 47.619 6.85 0.00 0.00 2.69
3667 3737 1.204704 ACTGAAGATGATCGGCGTTGA 59.795 47.619 6.85 0.00 0.00 3.18
3668 3738 1.645034 ACTGAAGATGATCGGCGTTG 58.355 50.000 6.85 0.00 0.00 4.10
3671 3741 1.212616 GGAACTGAAGATGATCGGCG 58.787 55.000 0.00 0.00 0.00 6.46
3684 3754 5.633830 ACATTGTCAAATAGCTGGAACTG 57.366 39.130 0.00 0.00 0.00 3.16
3703 3773 4.728772 TCTGAAACCACAAGGATGAACAT 58.271 39.130 0.00 0.00 38.69 2.71
3748 3818 0.179081 GGTCCATTACAGTCGAGCCC 60.179 60.000 0.00 0.00 0.00 5.19
3757 3827 1.406751 CGGTGCATCAGGTCCATTACA 60.407 52.381 0.00 0.00 0.00 2.41
3781 3851 3.305516 CTTGGGCTGTTGGCACCC 61.306 66.667 3.98 3.98 45.32 4.61
3784 3854 2.521465 CACCTTGGGCTGTTGGCA 60.521 61.111 0.00 0.00 44.01 4.92
3796 3866 2.301738 GCTGTAGGGGCTCCACCTT 61.302 63.158 4.79 0.00 39.54 3.50
3862 3932 4.785453 GCCCTTCCCAGGTCGCTG 62.785 72.222 0.00 0.00 38.79 5.18
4157 4235 4.519437 TGATCCTGCAGCGCCTCG 62.519 66.667 8.66 0.00 0.00 4.63
4167 4245 2.831770 CATCCGGGGGTGATCCTG 59.168 66.667 0.00 0.00 35.33 3.86
4229 4314 1.385528 TACATTGCTCTGCATGCTGG 58.614 50.000 22.54 14.73 38.76 4.85
4233 4318 8.036273 TGTCATATTATACATTGCTCTGCATG 57.964 34.615 0.00 0.00 38.76 4.06
4234 4319 8.625786 TTGTCATATTATACATTGCTCTGCAT 57.374 30.769 0.00 0.00 38.76 3.96
4235 4320 7.933033 TCTTGTCATATTATACATTGCTCTGCA 59.067 33.333 0.00 0.00 36.47 4.41
4241 4326 8.299262 ACGACTCTTGTCATATTATACATTGC 57.701 34.615 0.00 0.00 43.06 3.56
4285 4376 1.310933 CCACAGATCCTGGCAAGCAC 61.311 60.000 0.00 0.00 35.51 4.40
4312 4403 5.523552 GCAATAATACAAACAGCCCAAATCC 59.476 40.000 0.00 0.00 0.00 3.01
4313 4404 5.231991 CGCAATAATACAAACAGCCCAAATC 59.768 40.000 0.00 0.00 0.00 2.17
4315 4406 4.218635 TCGCAATAATACAAACAGCCCAAA 59.781 37.500 0.00 0.00 0.00 3.28
4319 4410 5.168526 TCATCGCAATAATACAAACAGCC 57.831 39.130 0.00 0.00 0.00 4.85
4361 4453 4.720902 CTGCACACCCGGCATGGA 62.721 66.667 0.00 0.00 41.06 3.41
4409 4501 4.270566 GTCACTGCTGCTCTCATTAAGATG 59.729 45.833 0.00 0.00 32.19 2.90
4412 4504 3.593096 TGTCACTGCTGCTCTCATTAAG 58.407 45.455 0.00 0.00 0.00 1.85
4413 4505 3.683365 TGTCACTGCTGCTCTCATTAA 57.317 42.857 0.00 0.00 0.00 1.40
4414 4506 3.196254 TGATGTCACTGCTGCTCTCATTA 59.804 43.478 0.00 0.00 0.00 1.90
4416 4508 1.553704 TGATGTCACTGCTGCTCTCAT 59.446 47.619 0.00 0.00 0.00 2.90
4463 4563 1.215382 CCTCTCGTCCACATTCGCA 59.785 57.895 0.00 0.00 0.00 5.10
4464 4564 0.103208 ATCCTCTCGTCCACATTCGC 59.897 55.000 0.00 0.00 0.00 4.70
4465 4565 1.269309 GGATCCTCTCGTCCACATTCG 60.269 57.143 3.84 0.00 34.57 3.34
4466 4566 2.035632 AGGATCCTCTCGTCCACATTC 58.964 52.381 9.02 0.00 36.96 2.67
4467 4567 1.759445 CAGGATCCTCTCGTCCACATT 59.241 52.381 12.69 0.00 36.96 2.71
4468 4568 1.342474 ACAGGATCCTCTCGTCCACAT 60.342 52.381 12.69 0.00 36.96 3.21
4582 4707 2.433145 CCGCACGCACTCACTCAT 60.433 61.111 0.00 0.00 0.00 2.90
4644 4779 1.203994 GTACATACAGACAGCGGTGGT 59.796 52.381 20.20 9.79 0.00 4.16
4703 4838 2.978824 CGGGCGGGAGAAGAGAAA 59.021 61.111 0.00 0.00 0.00 2.52
4704 4839 3.771160 GCGGGCGGGAGAAGAGAA 61.771 66.667 0.00 0.00 0.00 2.87
4794 4948 1.975327 TCGCTGGAGTTTCAGGGAG 59.025 57.895 3.26 0.00 46.88 4.30
4801 4955 0.665369 CGTAACCGTCGCTGGAGTTT 60.665 55.000 0.00 0.00 0.00 2.66
4875 5029 9.112725 TGATGATGATTAGTGGACAAACTTATG 57.887 33.333 0.00 0.00 0.00 1.90
4980 5143 4.357947 TCTGAGGACGCGTGTGCC 62.358 66.667 20.70 12.83 37.08 5.01
5012 5175 2.255770 TTTGGTTGTTGGAAAGGGGT 57.744 45.000 0.00 0.00 0.00 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.