Multiple sequence alignment - TraesCS5A01G209700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G209700 chr5A 100.000 3813 0 0 1 3813 423044713 423040901 0.000000e+00 7042.0
1 TraesCS5A01G209700 chr5A 94.737 171 8 1 351 520 423046680 423046850 8.120000e-67 265.0
2 TraesCS5A01G209700 chr5A 98.639 147 2 0 621 767 667108178 667108032 1.050000e-65 261.0
3 TraesCS5A01G209700 chr5B 92.630 1981 94 17 1512 3477 377346109 377344166 0.000000e+00 2802.0
4 TraesCS5A01G209700 chr5B 90.691 376 23 5 966 1338 377346500 377346134 1.230000e-134 490.0
5 TraesCS5A01G209700 chr5B 98.485 132 2 0 621 752 73351870 73352001 2.290000e-57 233.0
6 TraesCS5A01G209700 chr5B 89.175 194 8 6 768 956 377346727 377346542 2.960000e-56 230.0
7 TraesCS5A01G209700 chr5B 90.698 86 6 2 3124 3208 430651887 430651971 3.110000e-21 113.0
8 TraesCS5A01G209700 chr5D 97.603 876 18 3 2235 3110 324908562 324907690 0.000000e+00 1498.0
9 TraesCS5A01G209700 chr5D 92.680 847 45 11 1337 2178 324909392 324908558 0.000000e+00 1205.0
10 TraesCS5A01G209700 chr5D 90.957 575 26 7 768 1336 324910010 324909456 0.000000e+00 750.0
11 TraesCS5A01G209700 chr5D 93.884 327 20 0 3482 3808 495303644 495303318 9.520000e-136 494.0
12 TraesCS5A01G209700 chr5D 91.810 232 16 3 3246 3477 324907695 324907467 1.710000e-83 320.0
13 TraesCS5A01G209700 chr5D 98.639 147 2 0 621 767 426165275 426165421 1.050000e-65 261.0
14 TraesCS5A01G209700 chr5D 92.537 67 3 1 554 620 324910076 324910012 1.130000e-15 95.3
15 TraesCS5A01G209700 chr2A 98.273 521 7 2 1 520 757958459 757957940 0.000000e+00 911.0
16 TraesCS5A01G209700 chr2A 95.322 171 6 2 351 520 757960426 757960595 1.750000e-68 270.0
17 TraesCS5A01G209700 chr2A 87.838 148 17 1 620 767 711542941 711542795 5.060000e-39 172.0
18 TraesCS5A01G209700 chr2A 92.683 82 6 0 3128 3209 715964332 715964251 6.690000e-23 119.0
19 TraesCS5A01G209700 chr2A 85.057 87 11 2 3391 3476 666837501 666837416 1.890000e-13 87.9
20 TraesCS5A01G209700 chr7B 96.756 524 15 2 1 523 2755678 2756200 0.000000e+00 872.0
21 TraesCS5A01G209700 chr7B 98.639 147 2 0 621 767 565060165 565060311 1.050000e-65 261.0
22 TraesCS5A01G209700 chr7B 94.152 171 7 2 351 520 2750999 2750831 1.360000e-64 257.0
23 TraesCS5A01G209700 chr7B 97.959 147 3 0 621 767 99594168 99594314 4.890000e-64 255.0
24 TraesCS5A01G209700 chr7B 83.117 154 26 0 3322 3475 60912453 60912300 1.430000e-29 141.0
25 TraesCS5A01G209700 chr7B 93.750 80 5 0 3128 3207 570465365 570465286 1.860000e-23 121.0
26 TraesCS5A01G209700 chr4B 96.395 527 15 4 1 525 183675373 183675897 0.000000e+00 865.0
27 TraesCS5A01G209700 chr4B 96.552 522 16 2 1 521 602884452 602883932 0.000000e+00 863.0
28 TraesCS5A01G209700 chr4B 82.864 391 48 13 1893 2275 311414546 311414925 2.200000e-87 333.0
29 TraesCS5A01G209700 chr4B 95.294 170 7 1 351 519 183673407 183673238 6.280000e-68 268.0
30 TraesCS5A01G209700 chr4B 94.152 171 7 3 351 520 602889137 602889305 1.360000e-64 257.0
31 TraesCS5A01G209700 chr2D 93.134 335 22 1 3479 3813 115598360 115598693 1.230000e-134 490.0
32 TraesCS5A01G209700 chr2D 83.439 157 25 1 3319 3475 644659651 644659496 1.100000e-30 145.0
33 TraesCS5A01G209700 chr2D 92.683 82 6 0 3128 3209 607675860 607675779 6.690000e-23 119.0
34 TraesCS5A01G209700 chr3D 92.353 340 23 3 3474 3813 529114194 529114530 7.410000e-132 481.0
35 TraesCS5A01G209700 chr1A 92.331 326 24 1 3482 3807 373338328 373338004 2.680000e-126 462.0
36 TraesCS5A01G209700 chr1A 91.541 331 25 3 3478 3807 382738348 382738020 1.610000e-123 453.0
37 TraesCS5A01G209700 chr1A 93.750 80 5 0 3127 3206 241076306 241076227 1.860000e-23 121.0
38 TraesCS5A01G209700 chr2B 91.212 330 29 0 3479 3808 549030370 549030699 2.090000e-122 449.0
39 TraesCS5A01G209700 chr2B 83.376 391 46 13 1893 2275 409254847 409255226 1.010000e-90 344.0
40 TraesCS5A01G209700 chr2B 98.639 147 2 0 621 767 69415964 69416110 1.050000e-65 261.0
41 TraesCS5A01G209700 chr2B 86.260 131 18 0 3335 3465 55893628 55893758 3.970000e-30 143.0
42 TraesCS5A01G209700 chr6D 95.045 222 11 0 3482 3703 66256873 66256652 2.180000e-92 350.0
43 TraesCS5A01G209700 chr3A 97.351 151 3 1 617 767 570664117 570664266 4.890000e-64 255.0
44 TraesCS5A01G209700 chr3A 88.435 147 17 0 621 767 658314754 658314900 1.090000e-40 178.0
45 TraesCS5A01G209700 chr3B 80.606 330 60 3 3482 3808 673107268 673107596 6.320000e-63 252.0
46 TraesCS5A01G209700 chr3B 85.350 157 23 0 3319 3475 2158385 2158541 3.050000e-36 163.0
47 TraesCS5A01G209700 chr6B 81.518 303 54 2 3506 3807 485367248 485366947 8.180000e-62 248.0
48 TraesCS5A01G209700 chr1D 85.161 155 23 0 3321 3475 308480715 308480561 3.940000e-35 159.0
49 TraesCS5A01G209700 chr1D 93.671 79 5 0 3129 3207 169065296 169065374 6.690000e-23 119.0
50 TraesCS5A01G209700 chr1B 93.671 79 5 0 3129 3207 249625004 249624926 6.690000e-23 119.0
51 TraesCS5A01G209700 chr1B 91.765 85 6 1 3127 3211 589945250 589945167 2.410000e-22 117.0
52 TraesCS5A01G209700 chr7D 86.567 67 8 1 3415 3480 3891598 3891532 5.280000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G209700 chr5A 423040901 423044713 3812 True 7042.00 7042 100.0000 1 3813 1 chr5A.!!$R1 3812
1 TraesCS5A01G209700 chr5B 377344166 377346727 2561 True 1174.00 2802 90.8320 768 3477 3 chr5B.!!$R1 2709
2 TraesCS5A01G209700 chr5D 324907467 324910076 2609 True 773.66 1498 93.1174 554 3477 5 chr5D.!!$R2 2923
3 TraesCS5A01G209700 chr2A 757957940 757958459 519 True 911.00 911 98.2730 1 520 1 chr2A.!!$R4 519
4 TraesCS5A01G209700 chr7B 2755678 2756200 522 False 872.00 872 96.7560 1 523 1 chr7B.!!$F1 522
5 TraesCS5A01G209700 chr4B 183675373 183675897 524 False 865.00 865 96.3950 1 525 1 chr4B.!!$F1 524
6 TraesCS5A01G209700 chr4B 602883932 602884452 520 True 863.00 863 96.5520 1 521 1 chr4B.!!$R2 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
683 685 0.107508 ATGTAGCACATCAAGCCGCT 60.108 50.0 0.00 0.0 32.38 5.52 F
688 690 0.171903 GCACATCAAGCCGCTCATTT 59.828 50.0 0.00 0.0 0.00 2.32 F
1858 1963 0.107214 TCATGTTGGGATCCTTCGCC 60.107 55.0 12.58 0.0 34.02 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1693 1798 0.307760 CTCGCCAACCTCACAACAAC 59.692 55.0 0.0 0.00 0.00 3.32 R
2374 2490 0.683973 CAGATGGCCCGATAGCTTCT 59.316 55.0 0.0 0.00 0.00 2.85 R
3793 3914 0.249031 GAAATAGGCATGGCGTTGGC 60.249 55.0 14.3 5.78 42.18 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 113 0.740868 GCATCTGCTTGACGCCACTA 60.741 55.000 0.00 0.00 38.05 2.74
198 199 1.016627 GATTCCAATGCAGCAGCGTA 58.983 50.000 0.00 0.00 46.23 4.42
409 410 3.559069 ACTAGTCGATGGGTATTTCCGA 58.441 45.455 0.00 0.00 37.00 4.55
442 443 1.303806 GGCTAAAAAGGGCCACGGA 60.304 57.895 6.18 0.00 0.00 4.69
447 449 2.014033 AAAAAGGGCCACGGAAGGGA 62.014 55.000 6.18 0.00 35.60 4.20
525 527 4.101448 CAAGCCCCGTCCCTCCAG 62.101 72.222 0.00 0.00 0.00 3.86
530 532 3.775654 CCCGTCCCTCCAGCTCAC 61.776 72.222 0.00 0.00 0.00 3.51
531 533 4.135153 CCGTCCCTCCAGCTCACG 62.135 72.222 0.00 0.00 0.00 4.35
532 534 3.374402 CGTCCCTCCAGCTCACGT 61.374 66.667 0.00 0.00 0.00 4.49
533 535 2.932234 CGTCCCTCCAGCTCACGTT 61.932 63.158 0.00 0.00 0.00 3.99
534 536 1.079750 GTCCCTCCAGCTCACGTTC 60.080 63.158 0.00 0.00 0.00 3.95
535 537 1.533033 TCCCTCCAGCTCACGTTCA 60.533 57.895 0.00 0.00 0.00 3.18
536 538 1.374758 CCCTCCAGCTCACGTTCAC 60.375 63.158 0.00 0.00 0.00 3.18
537 539 1.734477 CCTCCAGCTCACGTTCACG 60.734 63.158 0.00 0.00 46.33 4.35
538 540 2.355837 TCCAGCTCACGTTCACGC 60.356 61.111 0.00 0.00 44.43 5.34
539 541 3.414700 CCAGCTCACGTTCACGCC 61.415 66.667 0.00 0.00 44.43 5.68
540 542 3.414700 CAGCTCACGTTCACGCCC 61.415 66.667 0.00 0.00 44.43 6.13
541 543 3.923864 AGCTCACGTTCACGCCCA 61.924 61.111 0.00 0.00 44.43 5.36
542 544 3.712881 GCTCACGTTCACGCCCAC 61.713 66.667 0.00 0.00 44.43 4.61
543 545 3.403057 CTCACGTTCACGCCCACG 61.403 66.667 0.00 0.00 44.43 4.94
568 570 2.738480 CGACCCAAACCTCGTCCA 59.262 61.111 0.00 0.00 0.00 4.02
574 576 1.374252 CAAACCTCGTCCACCTCCG 60.374 63.158 0.00 0.00 0.00 4.63
578 580 3.062466 CTCGTCCACCTCCGCTCA 61.062 66.667 0.00 0.00 0.00 4.26
579 581 3.343788 CTCGTCCACCTCCGCTCAC 62.344 68.421 0.00 0.00 0.00 3.51
583 585 4.087892 CCACCTCCGCTCACCCTG 62.088 72.222 0.00 0.00 0.00 4.45
662 664 4.745549 GGCGAACGATTTGCAGAC 57.254 55.556 10.70 0.00 42.00 3.51
663 665 1.225745 GGCGAACGATTTGCAGACG 60.226 57.895 10.70 7.49 42.00 4.18
664 666 1.623081 GGCGAACGATTTGCAGACGA 61.623 55.000 14.13 0.00 42.00 4.20
665 667 0.370273 GCGAACGATTTGCAGACGAT 59.630 50.000 14.13 4.45 39.91 3.73
666 668 1.848186 GCGAACGATTTGCAGACGATG 60.848 52.381 14.13 0.00 39.91 3.84
667 669 1.390123 CGAACGATTTGCAGACGATGT 59.610 47.619 14.13 0.00 0.00 3.06
668 670 2.596862 CGAACGATTTGCAGACGATGTA 59.403 45.455 14.13 0.00 0.00 2.29
669 671 3.301197 CGAACGATTTGCAGACGATGTAG 60.301 47.826 14.13 0.89 0.00 2.74
670 672 1.927174 ACGATTTGCAGACGATGTAGC 59.073 47.619 14.13 0.00 0.00 3.58
671 673 1.926510 CGATTTGCAGACGATGTAGCA 59.073 47.619 0.00 0.00 34.79 3.49
672 674 2.285256 CGATTTGCAGACGATGTAGCAC 60.285 50.000 0.00 0.00 36.62 4.40
673 675 2.162319 TTTGCAGACGATGTAGCACA 57.838 45.000 0.00 0.00 36.62 4.57
674 676 2.385013 TTGCAGACGATGTAGCACAT 57.615 45.000 0.00 2.02 42.43 3.21
682 684 2.397751 ATGTAGCACATCAAGCCGC 58.602 52.632 0.00 0.00 32.38 6.53
683 685 0.107508 ATGTAGCACATCAAGCCGCT 60.108 50.000 0.00 0.00 32.38 5.52
684 686 0.740868 TGTAGCACATCAAGCCGCTC 60.741 55.000 0.00 0.00 35.93 5.03
685 687 0.740868 GTAGCACATCAAGCCGCTCA 60.741 55.000 0.00 0.00 35.93 4.26
686 688 0.178767 TAGCACATCAAGCCGCTCAT 59.821 50.000 0.00 0.00 35.93 2.90
687 689 0.679002 AGCACATCAAGCCGCTCATT 60.679 50.000 0.00 0.00 0.00 2.57
688 690 0.171903 GCACATCAAGCCGCTCATTT 59.828 50.000 0.00 0.00 0.00 2.32
689 691 1.904144 CACATCAAGCCGCTCATTTG 58.096 50.000 0.00 0.00 0.00 2.32
690 692 1.200716 CACATCAAGCCGCTCATTTGT 59.799 47.619 0.00 0.00 0.00 2.83
691 693 2.419673 CACATCAAGCCGCTCATTTGTA 59.580 45.455 0.00 0.00 0.00 2.41
692 694 3.081061 ACATCAAGCCGCTCATTTGTAA 58.919 40.909 0.00 0.00 0.00 2.41
693 695 3.505680 ACATCAAGCCGCTCATTTGTAAA 59.494 39.130 0.00 0.00 0.00 2.01
694 696 3.829886 TCAAGCCGCTCATTTGTAAAG 57.170 42.857 0.00 0.00 0.00 1.85
695 697 2.095263 TCAAGCCGCTCATTTGTAAAGC 60.095 45.455 0.00 0.00 0.00 3.51
696 698 1.533625 AGCCGCTCATTTGTAAAGCA 58.466 45.000 0.00 0.00 35.76 3.91
697 699 1.885887 AGCCGCTCATTTGTAAAGCAA 59.114 42.857 0.00 0.00 35.76 3.91
711 713 7.583860 TTGTAAAGCAAAACTAAACAACACC 57.416 32.000 0.00 0.00 31.58 4.16
712 714 5.800941 TGTAAAGCAAAACTAAACAACACCG 59.199 36.000 0.00 0.00 0.00 4.94
713 715 4.443913 AAGCAAAACTAAACAACACCGT 57.556 36.364 0.00 0.00 0.00 4.83
714 716 4.443913 AGCAAAACTAAACAACACCGTT 57.556 36.364 0.00 0.00 0.00 4.44
715 717 4.417506 AGCAAAACTAAACAACACCGTTC 58.582 39.130 0.00 0.00 0.00 3.95
716 718 3.238798 GCAAAACTAAACAACACCGTTCG 59.761 43.478 0.00 0.00 0.00 3.95
717 719 4.649977 CAAAACTAAACAACACCGTTCGA 58.350 39.130 0.00 0.00 0.00 3.71
718 720 5.267776 CAAAACTAAACAACACCGTTCGAT 58.732 37.500 0.00 0.00 0.00 3.59
719 721 4.720530 AACTAAACAACACCGTTCGATC 57.279 40.909 0.00 0.00 0.00 3.69
720 722 3.062042 ACTAAACAACACCGTTCGATCC 58.938 45.455 0.00 0.00 0.00 3.36
721 723 1.956297 AAACAACACCGTTCGATCCA 58.044 45.000 0.00 0.00 0.00 3.41
722 724 1.956297 AACAACACCGTTCGATCCAA 58.044 45.000 0.00 0.00 0.00 3.53
723 725 1.223187 ACAACACCGTTCGATCCAAC 58.777 50.000 0.00 0.00 0.00 3.77
724 726 1.222300 CAACACCGTTCGATCCAACA 58.778 50.000 4.06 0.00 0.00 3.33
725 727 1.804151 CAACACCGTTCGATCCAACAT 59.196 47.619 4.06 0.00 0.00 2.71
726 728 1.722011 ACACCGTTCGATCCAACATC 58.278 50.000 4.06 0.00 0.00 3.06
727 729 0.645355 CACCGTTCGATCCAACATCG 59.355 55.000 4.06 0.00 42.38 3.84
728 730 0.245539 ACCGTTCGATCCAACATCGT 59.754 50.000 4.06 0.00 41.77 3.73
729 731 0.921347 CCGTTCGATCCAACATCGTC 59.079 55.000 4.06 0.00 41.77 4.20
730 732 0.921347 CGTTCGATCCAACATCGTCC 59.079 55.000 4.06 0.00 41.77 4.79
731 733 1.734377 CGTTCGATCCAACATCGTCCA 60.734 52.381 4.06 0.00 41.77 4.02
732 734 1.927174 GTTCGATCCAACATCGTCCAG 59.073 52.381 0.00 0.00 41.77 3.86
733 735 1.182667 TCGATCCAACATCGTCCAGT 58.817 50.000 4.06 0.00 41.77 4.00
734 736 1.135112 TCGATCCAACATCGTCCAGTG 60.135 52.381 4.06 0.00 41.77 3.66
735 737 1.404181 CGATCCAACATCGTCCAGTGT 60.404 52.381 0.00 0.00 36.84 3.55
736 738 2.699954 GATCCAACATCGTCCAGTGTT 58.300 47.619 0.00 0.00 39.00 3.32
737 739 2.163818 TCCAACATCGTCCAGTGTTC 57.836 50.000 0.00 0.00 36.48 3.18
738 740 0.790207 CCAACATCGTCCAGTGTTCG 59.210 55.000 0.00 0.00 36.48 3.95
739 741 0.790207 CAACATCGTCCAGTGTTCGG 59.210 55.000 4.78 0.00 36.48 4.30
740 742 0.949105 AACATCGTCCAGTGTTCGGC 60.949 55.000 4.78 0.00 33.53 5.54
741 743 2.100631 CATCGTCCAGTGTTCGGCC 61.101 63.158 0.00 0.00 0.00 6.13
742 744 3.642778 ATCGTCCAGTGTTCGGCCG 62.643 63.158 22.12 22.12 0.00 6.13
744 746 3.998672 GTCCAGTGTTCGGCCGGA 61.999 66.667 27.83 16.16 0.00 5.14
745 747 3.691342 TCCAGTGTTCGGCCGGAG 61.691 66.667 27.83 3.83 0.00 4.63
746 748 4.003788 CCAGTGTTCGGCCGGAGT 62.004 66.667 27.83 9.84 0.00 3.85
747 749 2.642254 CCAGTGTTCGGCCGGAGTA 61.642 63.158 27.83 5.61 0.00 2.59
748 750 1.445582 CAGTGTTCGGCCGGAGTAC 60.446 63.158 27.83 18.82 0.00 2.73
749 751 1.605738 AGTGTTCGGCCGGAGTACT 60.606 57.895 27.83 20.91 0.00 2.73
750 752 1.445582 GTGTTCGGCCGGAGTACTG 60.446 63.158 27.83 0.00 0.00 2.74
751 753 1.904865 TGTTCGGCCGGAGTACTGT 60.905 57.895 27.83 0.00 0.00 3.55
752 754 1.153881 GTTCGGCCGGAGTACTGTC 60.154 63.158 27.83 0.00 0.00 3.51
753 755 2.693762 TTCGGCCGGAGTACTGTCG 61.694 63.158 27.83 4.03 0.00 4.35
754 756 3.437795 CGGCCGGAGTACTGTCGT 61.438 66.667 20.10 0.00 0.00 4.34
755 757 2.488820 GGCCGGAGTACTGTCGTC 59.511 66.667 5.05 0.00 0.00 4.20
756 758 2.045131 GGCCGGAGTACTGTCGTCT 61.045 63.158 5.05 0.00 0.00 4.18
757 759 1.136984 GCCGGAGTACTGTCGTCTG 59.863 63.158 5.05 0.00 0.00 3.51
758 760 1.584380 GCCGGAGTACTGTCGTCTGT 61.584 60.000 5.05 0.00 0.00 3.41
759 761 1.730501 CCGGAGTACTGTCGTCTGTA 58.269 55.000 0.00 0.00 0.00 2.74
760 762 2.286872 CCGGAGTACTGTCGTCTGTAT 58.713 52.381 0.00 0.00 32.34 2.29
761 763 3.461061 CCGGAGTACTGTCGTCTGTATA 58.539 50.000 0.00 0.00 32.34 1.47
762 764 3.493877 CCGGAGTACTGTCGTCTGTATAG 59.506 52.174 0.00 0.00 32.34 1.31
763 765 4.118410 CGGAGTACTGTCGTCTGTATAGT 58.882 47.826 0.00 0.00 32.34 2.12
764 766 5.284864 CGGAGTACTGTCGTCTGTATAGTA 58.715 45.833 0.00 0.00 32.34 1.82
765 767 5.401972 CGGAGTACTGTCGTCTGTATAGTAG 59.598 48.000 0.00 0.00 32.34 2.57
766 768 6.279882 GGAGTACTGTCGTCTGTATAGTAGT 58.720 44.000 0.00 0.00 32.34 2.73
802 804 2.066262 ACGTGGCACAGTTATTCTTCG 58.934 47.619 19.09 1.06 41.80 3.79
828 830 2.237751 CGGCTCGCCTTCATTACCG 61.238 63.158 6.35 0.00 0.00 4.02
868 870 1.526917 CCCCATCCATTCGTGCCTC 60.527 63.158 0.00 0.00 0.00 4.70
884 886 3.020984 TGCCTCATTTAAAATCCGACCC 58.979 45.455 0.00 0.00 0.00 4.46
938 945 1.271434 GGCCGTTTCTTCTCCTTCCTT 60.271 52.381 0.00 0.00 0.00 3.36
939 946 2.077627 GCCGTTTCTTCTCCTTCCTTC 58.922 52.381 0.00 0.00 0.00 3.46
940 947 2.701107 CCGTTTCTTCTCCTTCCTTCC 58.299 52.381 0.00 0.00 0.00 3.46
941 948 2.303311 CCGTTTCTTCTCCTTCCTTCCT 59.697 50.000 0.00 0.00 0.00 3.36
952 959 0.391130 TTCCTTCCTGTTGGCGATCG 60.391 55.000 11.69 11.69 0.00 3.69
1086 1125 3.083997 CCGGTGGGGAAGGAGGAG 61.084 72.222 0.00 0.00 38.47 3.69
1087 1126 3.083997 CGGTGGGGAAGGAGGAGG 61.084 72.222 0.00 0.00 0.00 4.30
1174 1213 1.330655 GGAGGAGTCGCTTCCCATCA 61.331 60.000 0.00 0.00 36.79 3.07
1178 1217 0.179097 GAGTCGCTTCCCATCAGGTC 60.179 60.000 0.00 0.00 36.75 3.85
1195 1234 2.271497 CAGGAGCAGAGCCCCTTG 59.729 66.667 0.00 0.00 0.00 3.61
1196 1235 3.726144 AGGAGCAGAGCCCCTTGC 61.726 66.667 0.00 0.00 41.71 4.01
1208 1250 1.868109 GCCCCTTGCGTCTTTTTGTTC 60.868 52.381 0.00 0.00 0.00 3.18
1364 1469 1.678425 GGGAGAGTAGGACGACGAACT 60.678 57.143 0.00 1.20 0.00 3.01
1366 1471 2.159544 GGAGAGTAGGACGACGAACTTG 60.160 54.545 0.00 0.00 0.00 3.16
1370 1475 3.378339 AGTAGGACGACGAACTTGTTTG 58.622 45.455 0.00 0.00 0.00 2.93
1375 1480 1.395608 ACGACGAACTTGTTTGTGTGG 59.604 47.619 10.73 3.70 0.00 4.17
1381 1486 1.358759 CTTGTTTGTGTGGACCGCC 59.641 57.895 1.74 0.00 0.00 6.13
1395 1500 2.317973 GACCGCCCTAGAGGATTACTT 58.682 52.381 0.00 0.00 38.24 2.24
1433 1538 9.162764 AGTAAACTGATGTATTGTCATACAACC 57.837 33.333 0.00 0.00 46.76 3.77
1436 1541 3.874543 TGATGTATTGTCATACAACCGGC 59.125 43.478 0.00 0.00 46.76 6.13
1440 1545 2.208132 TTGTCATACAACCGGCCAAT 57.792 45.000 0.00 0.00 32.34 3.16
1441 1546 1.458398 TGTCATACAACCGGCCAATG 58.542 50.000 0.00 0.00 0.00 2.82
1442 1547 0.738389 GTCATACAACCGGCCAATGG 59.262 55.000 0.00 0.00 0.00 3.16
1462 1567 4.783764 GGAAGGTTCCGATTCAACAAAT 57.216 40.909 0.00 0.00 37.65 2.32
1483 1588 3.751246 CCAATGTGGGCTGCCACG 61.751 66.667 22.05 4.66 42.98 4.94
1496 1601 2.926159 GCTGCCACGTGTTGCAATTATT 60.926 45.455 18.12 0.00 36.98 1.40
1497 1602 3.671971 GCTGCCACGTGTTGCAATTATTA 60.672 43.478 18.12 0.00 36.98 0.98
1498 1603 4.671377 CTGCCACGTGTTGCAATTATTAT 58.329 39.130 18.12 0.00 36.98 1.28
1499 1604 5.731967 GCTGCCACGTGTTGCAATTATTATA 60.732 40.000 18.12 0.00 36.98 0.98
1502 1607 7.356540 TGCCACGTGTTGCAATTATTATATAC 58.643 34.615 15.78 0.00 33.87 1.47
1549 1654 7.327214 ACTTCTCTTAGAGTTGTGGATCATTC 58.673 38.462 9.25 0.00 0.00 2.67
1817 1922 5.246307 AGCTGGAAATTCTACAGTACAACC 58.754 41.667 0.00 0.00 34.79 3.77
1858 1963 0.107214 TCATGTTGGGATCCTTCGCC 60.107 55.000 12.58 0.00 34.02 5.54
1878 1983 3.735591 CCGTATATGAACCCCACGAAAT 58.264 45.455 0.00 0.00 34.66 2.17
1891 1996 3.065371 CCCACGAAATAGTGCTCCATTTC 59.935 47.826 8.91 8.91 40.59 2.17
1918 2023 6.236017 TGTTTGCTACTATACAAAGTGTGC 57.764 37.500 0.00 0.00 36.50 4.57
1968 2073 6.488344 TCCTACATGTTTTGCAAACAGTATGA 59.512 34.615 12.39 11.13 39.69 2.15
1975 2080 6.040278 TGTTTTGCAAACAGTATGATCCTTCA 59.960 34.615 12.39 0.00 39.69 3.02
1982 2087 7.467811 GCAAACAGTATGATCCTTCAATGGTAG 60.468 40.741 0.00 0.00 39.69 3.18
2052 2158 6.073327 AGTAGCTTTAGTTTTTCTTGCCAC 57.927 37.500 0.00 0.00 0.00 5.01
2063 2169 1.303888 CTTGCCACCATGGTCTGCT 60.304 57.895 27.59 1.93 40.46 4.24
2099 2205 5.667644 GCAAAAGTTCCTTTGTTTGTTGACG 60.668 40.000 0.00 0.00 38.35 4.35
2186 2292 4.089493 GCATGCTTGCTCATAAATAATGCG 59.911 41.667 16.80 0.00 45.77 4.73
2193 2299 3.610114 GCTCATAAATAATGCGCCACCAG 60.610 47.826 4.18 0.00 39.87 4.00
2374 2490 5.707298 GTCCAGATCTTTCACATTCCTCAAA 59.293 40.000 0.00 0.00 0.00 2.69
2398 2514 0.319900 CTATCGGGCCATCTGGTTCG 60.320 60.000 4.39 0.00 37.57 3.95
2557 2673 1.562672 TAAGCAGGTTGAGGCCCTCC 61.563 60.000 8.62 0.00 0.00 4.30
2718 2834 3.381949 GGTCTTGCGCGTCTAAGATATT 58.618 45.455 19.83 0.00 35.58 1.28
2799 2915 4.301628 CTCATCTGTTTGCCTGGAAAAAC 58.698 43.478 0.17 9.59 36.92 2.43
2952 3072 5.155161 TGCCTAAATAAGAGGGAGCAGATA 58.845 41.667 0.00 0.00 34.35 1.98
2953 3073 5.606749 TGCCTAAATAAGAGGGAGCAGATAA 59.393 40.000 0.00 0.00 34.35 1.75
3129 3250 6.641169 TTGAACATTGGTACTTGTGCAATA 57.359 33.333 11.24 0.00 36.36 1.90
3138 3259 1.066143 ACTTGTGCAATACTCCCTCCG 60.066 52.381 0.00 0.00 0.00 4.63
3140 3261 0.981183 TGTGCAATACTCCCTCCGTT 59.019 50.000 0.00 0.00 0.00 4.44
3141 3262 1.349688 TGTGCAATACTCCCTCCGTTT 59.650 47.619 0.00 0.00 0.00 3.60
3150 3271 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
3153 3274 2.095372 CCCTCCGTTTCGAATTACTTGC 59.905 50.000 0.00 0.00 0.00 4.01
3244 3365 7.863901 AGACATAGATAGGCCAAGTTCTAAT 57.136 36.000 5.01 0.00 0.00 1.73
3290 3411 7.649306 AGAAATGTAATGCTTTTGTGAACTGAC 59.351 33.333 0.00 0.00 0.00 3.51
3296 3417 3.947196 TGCTTTTGTGAACTGACATGAGT 59.053 39.130 0.00 0.00 0.00 3.41
3333 3454 3.845259 TGGGCTGGATCCGTACGC 61.845 66.667 10.49 7.85 0.00 4.42
3354 3475 1.136305 GGTCGTTACTCAGCCATGCTA 59.864 52.381 0.00 0.00 36.40 3.49
3388 3509 4.722526 ATATGGCTTATGGGTGCAACTA 57.277 40.909 0.00 0.00 36.74 2.24
3412 3533 0.310232 GAGACGGTAGCACGGGATAC 59.690 60.000 4.02 4.02 38.39 2.24
3417 3538 1.952296 CGGTAGCACGGGATACTTACT 59.048 52.381 13.54 0.00 36.19 2.24
3431 3552 6.218746 GGATACTTACTACCGGTTTGTATGG 58.781 44.000 15.04 14.00 30.95 2.74
3512 3633 3.629858 GCTCGCCAAGCCTTTATTG 57.370 52.632 0.00 0.00 45.92 1.90
3513 3634 1.094785 GCTCGCCAAGCCTTTATTGA 58.905 50.000 0.00 0.00 45.92 2.57
3514 3635 1.678101 GCTCGCCAAGCCTTTATTGAT 59.322 47.619 0.00 0.00 45.92 2.57
3515 3636 2.287248 GCTCGCCAAGCCTTTATTGATC 60.287 50.000 0.00 0.00 45.92 2.92
3516 3637 2.945008 CTCGCCAAGCCTTTATTGATCA 59.055 45.455 0.00 0.00 0.00 2.92
3517 3638 3.351740 TCGCCAAGCCTTTATTGATCAA 58.648 40.909 11.26 11.26 0.00 2.57
3518 3639 3.128589 TCGCCAAGCCTTTATTGATCAAC 59.871 43.478 11.07 0.00 0.00 3.18
3519 3640 3.129287 CGCCAAGCCTTTATTGATCAACT 59.871 43.478 11.07 0.00 0.00 3.16
3520 3641 4.335315 CGCCAAGCCTTTATTGATCAACTA 59.665 41.667 11.07 2.11 0.00 2.24
3521 3642 5.163663 CGCCAAGCCTTTATTGATCAACTAA 60.164 40.000 11.07 7.06 0.00 2.24
3522 3643 6.624861 CGCCAAGCCTTTATTGATCAACTAAA 60.625 38.462 11.07 14.32 0.00 1.85
3523 3644 7.096551 GCCAAGCCTTTATTGATCAACTAAAA 58.903 34.615 11.07 10.63 0.00 1.52
3524 3645 7.602265 GCCAAGCCTTTATTGATCAACTAAAAA 59.398 33.333 11.07 8.32 0.00 1.94
3525 3646 9.143631 CCAAGCCTTTATTGATCAACTAAAAAG 57.856 33.333 11.07 16.10 0.00 2.27
3526 3647 9.696917 CAAGCCTTTATTGATCAACTAAAAAGT 57.303 29.630 11.07 0.00 0.00 2.66
3547 3668 9.555411 AAAAGTTTATAGGGATTACAATTGGGT 57.445 29.630 10.83 0.00 0.00 4.51
3548 3669 8.762481 AAGTTTATAGGGATTACAATTGGGTC 57.238 34.615 10.83 4.56 0.00 4.46
3549 3670 7.878495 AGTTTATAGGGATTACAATTGGGTCA 58.122 34.615 10.83 0.00 0.00 4.02
3550 3671 8.511126 AGTTTATAGGGATTACAATTGGGTCAT 58.489 33.333 10.83 0.00 0.00 3.06
3551 3672 8.576442 GTTTATAGGGATTACAATTGGGTCATG 58.424 37.037 10.83 0.00 0.00 3.07
3552 3673 3.299503 AGGGATTACAATTGGGTCATGC 58.700 45.455 10.83 1.37 0.00 4.06
3553 3674 3.052642 AGGGATTACAATTGGGTCATGCT 60.053 43.478 10.83 0.00 0.00 3.79
3554 3675 3.068590 GGGATTACAATTGGGTCATGCTG 59.931 47.826 10.83 0.00 0.00 4.41
3555 3676 3.068590 GGATTACAATTGGGTCATGCTGG 59.931 47.826 10.83 0.00 0.00 4.85
3556 3677 3.448093 TTACAATTGGGTCATGCTGGA 57.552 42.857 10.83 0.00 0.00 3.86
3557 3678 2.537633 ACAATTGGGTCATGCTGGAT 57.462 45.000 10.83 0.00 0.00 3.41
3558 3679 2.104967 ACAATTGGGTCATGCTGGATG 58.895 47.619 10.83 2.36 0.00 3.51
3559 3680 1.117150 AATTGGGTCATGCTGGATGC 58.883 50.000 4.06 0.07 43.25 3.91
3560 3681 0.757935 ATTGGGTCATGCTGGATGCC 60.758 55.000 4.06 8.84 42.00 4.40
3561 3682 2.520260 GGGTCATGCTGGATGCCC 60.520 66.667 19.73 19.73 39.64 5.36
3562 3683 2.276409 GGTCATGCTGGATGCCCA 59.724 61.111 4.25 0.00 42.00 5.36
3563 3684 1.380246 GGTCATGCTGGATGCCCAA 60.380 57.895 4.25 0.00 42.98 4.12
3564 3685 1.669999 GGTCATGCTGGATGCCCAAC 61.670 60.000 4.25 0.00 42.98 3.77
3565 3686 1.380246 TCATGCTGGATGCCCAACC 60.380 57.895 4.06 0.00 42.98 3.77
3566 3687 1.683025 CATGCTGGATGCCCAACCA 60.683 57.895 0.00 0.00 42.98 3.67
3567 3688 1.683365 ATGCTGGATGCCCAACCAC 60.683 57.895 0.00 0.00 42.98 4.16
3568 3689 2.283101 GCTGGATGCCCAACCACA 60.283 61.111 0.00 0.00 42.98 4.17
3569 3690 1.907807 GCTGGATGCCCAACCACAA 60.908 57.895 0.00 0.00 42.98 3.33
3570 3691 1.470996 GCTGGATGCCCAACCACAAA 61.471 55.000 0.00 0.00 42.98 2.83
3571 3692 1.269012 CTGGATGCCCAACCACAAAT 58.731 50.000 0.00 0.00 42.98 2.32
3572 3693 0.975135 TGGATGCCCAACCACAAATG 59.025 50.000 0.00 0.00 40.09 2.32
3573 3694 0.391528 GGATGCCCAACCACAAATGC 60.392 55.000 0.00 0.00 0.00 3.56
3574 3695 0.391528 GATGCCCAACCACAAATGCC 60.392 55.000 0.00 0.00 0.00 4.40
3575 3696 0.837260 ATGCCCAACCACAAATGCCT 60.837 50.000 0.00 0.00 0.00 4.75
3576 3697 1.293179 GCCCAACCACAAATGCCTC 59.707 57.895 0.00 0.00 0.00 4.70
3577 3698 1.187567 GCCCAACCACAAATGCCTCT 61.188 55.000 0.00 0.00 0.00 3.69
3578 3699 0.890683 CCCAACCACAAATGCCTCTC 59.109 55.000 0.00 0.00 0.00 3.20
3579 3700 1.619654 CCAACCACAAATGCCTCTCA 58.380 50.000 0.00 0.00 0.00 3.27
3580 3701 1.962807 CCAACCACAAATGCCTCTCAA 59.037 47.619 0.00 0.00 0.00 3.02
3581 3702 2.288395 CCAACCACAAATGCCTCTCAAC 60.288 50.000 0.00 0.00 0.00 3.18
3582 3703 2.361757 CAACCACAAATGCCTCTCAACA 59.638 45.455 0.00 0.00 0.00 3.33
3583 3704 2.233271 ACCACAAATGCCTCTCAACAG 58.767 47.619 0.00 0.00 0.00 3.16
3584 3705 1.542915 CCACAAATGCCTCTCAACAGG 59.457 52.381 0.00 0.00 36.50 4.00
3585 3706 2.507484 CACAAATGCCTCTCAACAGGA 58.493 47.619 0.00 0.00 35.20 3.86
3586 3707 2.886523 CACAAATGCCTCTCAACAGGAA 59.113 45.455 0.00 0.00 35.20 3.36
3587 3708 3.057736 CACAAATGCCTCTCAACAGGAAG 60.058 47.826 0.00 0.00 35.20 3.46
3588 3709 3.152341 CAAATGCCTCTCAACAGGAAGT 58.848 45.455 0.00 0.00 35.20 3.01
3589 3710 2.486472 ATGCCTCTCAACAGGAAGTG 57.514 50.000 0.00 0.00 35.20 3.16
3590 3711 1.423584 TGCCTCTCAACAGGAAGTGA 58.576 50.000 0.00 0.00 35.20 3.41
3591 3712 1.345741 TGCCTCTCAACAGGAAGTGAG 59.654 52.381 0.00 0.00 35.20 3.51
3592 3713 1.620819 GCCTCTCAACAGGAAGTGAGA 59.379 52.381 3.55 3.55 35.20 3.27
3593 3714 2.235898 GCCTCTCAACAGGAAGTGAGAT 59.764 50.000 3.98 0.00 35.41 2.75
3594 3715 3.449018 GCCTCTCAACAGGAAGTGAGATA 59.551 47.826 3.98 0.00 35.41 1.98
3595 3716 4.679372 GCCTCTCAACAGGAAGTGAGATAC 60.679 50.000 3.98 0.00 35.41 2.24
3596 3717 4.142049 CCTCTCAACAGGAAGTGAGATACC 60.142 50.000 3.98 0.00 35.41 2.73
3597 3718 4.416516 TCTCAACAGGAAGTGAGATACCA 58.583 43.478 0.00 0.00 32.89 3.25
3598 3719 4.838423 TCTCAACAGGAAGTGAGATACCAA 59.162 41.667 0.00 0.00 32.89 3.67
3599 3720 5.306937 TCTCAACAGGAAGTGAGATACCAAA 59.693 40.000 0.00 0.00 32.89 3.28
3600 3721 6.013379 TCTCAACAGGAAGTGAGATACCAAAT 60.013 38.462 0.00 0.00 32.89 2.32
3601 3722 6.173339 TCAACAGGAAGTGAGATACCAAATC 58.827 40.000 0.00 0.00 0.00 2.17
3602 3723 6.013379 TCAACAGGAAGTGAGATACCAAATCT 60.013 38.462 0.00 0.00 0.00 2.40
3603 3724 7.180229 TCAACAGGAAGTGAGATACCAAATCTA 59.820 37.037 0.00 0.00 0.00 1.98
3604 3725 7.118496 ACAGGAAGTGAGATACCAAATCTAG 57.882 40.000 0.00 0.00 0.00 2.43
3605 3726 5.988561 CAGGAAGTGAGATACCAAATCTAGC 59.011 44.000 0.00 0.00 0.00 3.42
3606 3727 5.663106 AGGAAGTGAGATACCAAATCTAGCA 59.337 40.000 0.00 0.00 0.00 3.49
3607 3728 6.156949 AGGAAGTGAGATACCAAATCTAGCAA 59.843 38.462 0.00 0.00 0.00 3.91
3608 3729 6.481644 GGAAGTGAGATACCAAATCTAGCAAG 59.518 42.308 0.00 0.00 0.00 4.01
3609 3730 6.552445 AGTGAGATACCAAATCTAGCAAGT 57.448 37.500 0.00 0.00 0.00 3.16
3610 3731 6.578023 AGTGAGATACCAAATCTAGCAAGTC 58.422 40.000 0.00 0.00 0.00 3.01
3611 3732 6.382570 AGTGAGATACCAAATCTAGCAAGTCT 59.617 38.462 0.00 0.00 0.00 3.24
3612 3733 7.561722 AGTGAGATACCAAATCTAGCAAGTCTA 59.438 37.037 0.00 0.00 0.00 2.59
3613 3734 8.364142 GTGAGATACCAAATCTAGCAAGTCTAT 58.636 37.037 0.00 0.00 0.00 1.98
3614 3735 8.363390 TGAGATACCAAATCTAGCAAGTCTATG 58.637 37.037 0.00 0.00 0.00 2.23
3615 3736 8.484214 AGATACCAAATCTAGCAAGTCTATGA 57.516 34.615 0.00 0.00 0.00 2.15
3616 3737 8.584157 AGATACCAAATCTAGCAAGTCTATGAG 58.416 37.037 0.00 0.00 0.00 2.90
3617 3738 5.363939 ACCAAATCTAGCAAGTCTATGAGC 58.636 41.667 0.00 0.00 0.00 4.26
3618 3739 4.754114 CCAAATCTAGCAAGTCTATGAGCC 59.246 45.833 0.00 0.00 0.00 4.70
3619 3740 5.454471 CCAAATCTAGCAAGTCTATGAGCCT 60.454 44.000 0.00 0.00 0.00 4.58
3620 3741 5.467035 AATCTAGCAAGTCTATGAGCCTC 57.533 43.478 0.00 0.00 0.00 4.70
3621 3742 3.903467 TCTAGCAAGTCTATGAGCCTCA 58.097 45.455 0.00 0.00 0.00 3.86
3622 3743 4.478203 TCTAGCAAGTCTATGAGCCTCAT 58.522 43.478 12.62 12.62 40.72 2.90
3623 3744 5.635120 TCTAGCAAGTCTATGAGCCTCATA 58.365 41.667 13.58 13.58 38.26 2.15
3632 3753 5.041951 CTATGAGCCTCATAGTTCGACTC 57.958 47.826 26.74 0.00 46.92 3.36
3633 3754 3.006112 TGAGCCTCATAGTTCGACTCT 57.994 47.619 0.00 0.00 0.00 3.24
3634 3755 2.946329 TGAGCCTCATAGTTCGACTCTC 59.054 50.000 0.00 0.00 0.00 3.20
3635 3756 1.944024 AGCCTCATAGTTCGACTCTCG 59.056 52.381 0.00 0.00 42.10 4.04
3636 3757 7.933938 ATGAGCCTCATAGTTCGACTCTCGA 62.934 48.000 5.13 0.00 40.37 4.04
3645 3766 2.991434 TCGACTCTCGAGGTTCAAAG 57.009 50.000 13.56 3.66 44.82 2.77
3646 3767 2.501261 TCGACTCTCGAGGTTCAAAGA 58.499 47.619 13.56 0.95 44.82 2.52
3647 3768 2.882761 TCGACTCTCGAGGTTCAAAGAA 59.117 45.455 13.56 0.00 44.82 2.52
3648 3769 3.317149 TCGACTCTCGAGGTTCAAAGAAA 59.683 43.478 13.56 0.00 44.82 2.52
3649 3770 4.049186 CGACTCTCGAGGTTCAAAGAAAA 58.951 43.478 13.56 0.00 43.74 2.29
3650 3771 4.506654 CGACTCTCGAGGTTCAAAGAAAAA 59.493 41.667 13.56 0.00 43.74 1.94
3671 3792 6.790285 AAAATTACACGTCGTGAATAAGGT 57.210 33.333 30.95 9.85 36.96 3.50
3672 3793 5.773239 AATTACACGTCGTGAATAAGGTG 57.227 39.130 30.95 4.38 36.96 4.00
3673 3794 2.074547 ACACGTCGTGAATAAGGTGG 57.925 50.000 30.95 1.30 36.96 4.61
3674 3795 1.614903 ACACGTCGTGAATAAGGTGGA 59.385 47.619 30.95 0.00 36.96 4.02
3675 3796 2.036217 ACACGTCGTGAATAAGGTGGAA 59.964 45.455 30.95 0.00 36.96 3.53
3676 3797 2.666508 CACGTCGTGAATAAGGTGGAAG 59.333 50.000 20.75 0.00 35.23 3.46
3677 3798 2.298163 ACGTCGTGAATAAGGTGGAAGT 59.702 45.455 0.00 0.00 0.00 3.01
3678 3799 3.243975 ACGTCGTGAATAAGGTGGAAGTT 60.244 43.478 0.00 0.00 0.00 2.66
3679 3800 3.744426 CGTCGTGAATAAGGTGGAAGTTT 59.256 43.478 0.00 0.00 0.00 2.66
3680 3801 4.377022 CGTCGTGAATAAGGTGGAAGTTTG 60.377 45.833 0.00 0.00 0.00 2.93
3681 3802 4.514066 GTCGTGAATAAGGTGGAAGTTTGT 59.486 41.667 0.00 0.00 0.00 2.83
3682 3803 5.697633 GTCGTGAATAAGGTGGAAGTTTGTA 59.302 40.000 0.00 0.00 0.00 2.41
3683 3804 6.203338 GTCGTGAATAAGGTGGAAGTTTGTAA 59.797 38.462 0.00 0.00 0.00 2.41
3684 3805 6.425721 TCGTGAATAAGGTGGAAGTTTGTAAG 59.574 38.462 0.00 0.00 0.00 2.34
3685 3806 6.425721 CGTGAATAAGGTGGAAGTTTGTAAGA 59.574 38.462 0.00 0.00 0.00 2.10
3686 3807 7.119262 CGTGAATAAGGTGGAAGTTTGTAAGAT 59.881 37.037 0.00 0.00 0.00 2.40
3687 3808 8.451748 GTGAATAAGGTGGAAGTTTGTAAGATC 58.548 37.037 0.00 0.00 0.00 2.75
3688 3809 8.383175 TGAATAAGGTGGAAGTTTGTAAGATCT 58.617 33.333 0.00 0.00 0.00 2.75
3689 3810 8.794335 AATAAGGTGGAAGTTTGTAAGATCTC 57.206 34.615 0.00 0.00 0.00 2.75
3690 3811 6.441088 AAGGTGGAAGTTTGTAAGATCTCT 57.559 37.500 0.00 0.00 0.00 3.10
3691 3812 6.441088 AGGTGGAAGTTTGTAAGATCTCTT 57.559 37.500 0.00 0.00 39.85 2.85
3692 3813 6.842676 AGGTGGAAGTTTGTAAGATCTCTTT 58.157 36.000 0.00 0.00 37.40 2.52
3693 3814 6.712547 AGGTGGAAGTTTGTAAGATCTCTTTG 59.287 38.462 0.00 0.00 37.40 2.77
3694 3815 6.710744 GGTGGAAGTTTGTAAGATCTCTTTGA 59.289 38.462 0.00 0.00 37.40 2.69
3695 3816 7.391833 GGTGGAAGTTTGTAAGATCTCTTTGAT 59.608 37.037 0.00 0.00 37.40 2.57
3696 3817 8.233190 GTGGAAGTTTGTAAGATCTCTTTGATG 58.767 37.037 0.00 0.00 37.40 3.07
3697 3818 8.156820 TGGAAGTTTGTAAGATCTCTTTGATGA 58.843 33.333 0.00 0.00 37.40 2.92
3698 3819 9.171877 GGAAGTTTGTAAGATCTCTTTGATGAT 57.828 33.333 0.00 0.00 37.40 2.45
3704 3825 8.613060 TGTAAGATCTCTTTGATGATAATGCC 57.387 34.615 0.00 0.00 37.40 4.40
3705 3826 8.212995 TGTAAGATCTCTTTGATGATAATGCCA 58.787 33.333 0.00 0.00 37.40 4.92
3706 3827 9.228949 GTAAGATCTCTTTGATGATAATGCCAT 57.771 33.333 0.00 0.00 37.40 4.40
3707 3828 7.689446 AGATCTCTTTGATGATAATGCCATG 57.311 36.000 0.00 0.00 35.14 3.66
3708 3829 7.459234 AGATCTCTTTGATGATAATGCCATGA 58.541 34.615 0.00 0.00 35.14 3.07
3709 3830 8.110271 AGATCTCTTTGATGATAATGCCATGAT 58.890 33.333 0.00 0.00 35.14 2.45
3710 3831 7.683437 TCTCTTTGATGATAATGCCATGATC 57.317 36.000 0.00 0.00 0.00 2.92
3711 3832 6.370718 TCTCTTTGATGATAATGCCATGATCG 59.629 38.462 0.00 0.00 0.00 3.69
3712 3833 4.690184 TTGATGATAATGCCATGATCGC 57.310 40.909 0.00 0.00 0.00 4.58
3713 3834 3.011818 TGATGATAATGCCATGATCGCC 58.988 45.455 0.00 0.00 0.00 5.54
3714 3835 1.825090 TGATAATGCCATGATCGCCC 58.175 50.000 0.00 0.00 0.00 6.13
3715 3836 1.098050 GATAATGCCATGATCGCCCC 58.902 55.000 0.00 0.00 0.00 5.80
3716 3837 0.323725 ATAATGCCATGATCGCCCCC 60.324 55.000 0.00 0.00 0.00 5.40
3730 3851 2.444706 CCCCCGCTCTCTGATGGA 60.445 66.667 0.00 0.00 0.00 3.41
3731 3852 1.840650 CCCCCGCTCTCTGATGGAT 60.841 63.158 0.00 0.00 0.00 3.41
3732 3853 0.542938 CCCCCGCTCTCTGATGGATA 60.543 60.000 0.00 0.00 0.00 2.59
3733 3854 1.566211 CCCCGCTCTCTGATGGATAT 58.434 55.000 0.00 0.00 0.00 1.63
3734 3855 1.206610 CCCCGCTCTCTGATGGATATG 59.793 57.143 0.00 0.00 0.00 1.78
3735 3856 2.174360 CCCGCTCTCTGATGGATATGA 58.826 52.381 0.00 0.00 0.00 2.15
3736 3857 2.765135 CCCGCTCTCTGATGGATATGAT 59.235 50.000 0.00 0.00 0.00 2.45
3737 3858 3.197333 CCCGCTCTCTGATGGATATGATT 59.803 47.826 0.00 0.00 0.00 2.57
3738 3859 4.323333 CCCGCTCTCTGATGGATATGATTT 60.323 45.833 0.00 0.00 0.00 2.17
3739 3860 5.105187 CCCGCTCTCTGATGGATATGATTTA 60.105 44.000 0.00 0.00 0.00 1.40
3740 3861 5.809562 CCGCTCTCTGATGGATATGATTTAC 59.190 44.000 0.00 0.00 0.00 2.01
3741 3862 6.350864 CCGCTCTCTGATGGATATGATTTACT 60.351 42.308 0.00 0.00 0.00 2.24
3742 3863 7.148000 CCGCTCTCTGATGGATATGATTTACTA 60.148 40.741 0.00 0.00 0.00 1.82
3743 3864 7.700234 CGCTCTCTGATGGATATGATTTACTAC 59.300 40.741 0.00 0.00 0.00 2.73
3744 3865 7.978975 GCTCTCTGATGGATATGATTTACTACC 59.021 40.741 0.00 0.00 0.00 3.18
3745 3866 8.367660 TCTCTGATGGATATGATTTACTACCC 57.632 38.462 0.00 0.00 0.00 3.69
3746 3867 7.122799 TCTCTGATGGATATGATTTACTACCCG 59.877 40.741 0.00 0.00 0.00 5.28
3747 3868 5.730550 TGATGGATATGATTTACTACCCGC 58.269 41.667 0.00 0.00 0.00 6.13
3748 3869 5.483937 TGATGGATATGATTTACTACCCGCT 59.516 40.000 0.00 0.00 0.00 5.52
3749 3870 5.401531 TGGATATGATTTACTACCCGCTC 57.598 43.478 0.00 0.00 0.00 5.03
3750 3871 4.836175 TGGATATGATTTACTACCCGCTCA 59.164 41.667 0.00 0.00 0.00 4.26
3751 3872 5.169295 GGATATGATTTACTACCCGCTCAC 58.831 45.833 0.00 0.00 0.00 3.51
3752 3873 5.279306 GGATATGATTTACTACCCGCTCACA 60.279 44.000 0.00 0.00 0.00 3.58
3753 3874 3.520290 TGATTTACTACCCGCTCACAG 57.480 47.619 0.00 0.00 0.00 3.66
3754 3875 2.829720 TGATTTACTACCCGCTCACAGT 59.170 45.455 0.00 0.00 0.00 3.55
3755 3876 3.119245 TGATTTACTACCCGCTCACAGTC 60.119 47.826 0.00 0.00 0.00 3.51
3756 3877 1.913778 TTACTACCCGCTCACAGTCA 58.086 50.000 0.00 0.00 0.00 3.41
3757 3878 1.460504 TACTACCCGCTCACAGTCAG 58.539 55.000 0.00 0.00 0.00 3.51
3758 3879 0.251209 ACTACCCGCTCACAGTCAGA 60.251 55.000 0.00 0.00 0.00 3.27
3759 3880 0.888619 CTACCCGCTCACAGTCAGAA 59.111 55.000 0.00 0.00 0.00 3.02
3760 3881 0.888619 TACCCGCTCACAGTCAGAAG 59.111 55.000 0.00 0.00 0.00 2.85
3761 3882 1.739562 CCCGCTCACAGTCAGAAGC 60.740 63.158 0.00 0.00 0.00 3.86
3762 3883 1.005748 CCGCTCACAGTCAGAAGCA 60.006 57.895 0.00 0.00 0.00 3.91
3763 3884 0.601046 CCGCTCACAGTCAGAAGCAA 60.601 55.000 0.00 0.00 0.00 3.91
3764 3885 1.436600 CGCTCACAGTCAGAAGCAAT 58.563 50.000 0.00 0.00 0.00 3.56
3765 3886 1.392853 CGCTCACAGTCAGAAGCAATC 59.607 52.381 0.00 0.00 0.00 2.67
3766 3887 2.697654 GCTCACAGTCAGAAGCAATCT 58.302 47.619 0.00 0.00 39.68 2.40
3780 3901 7.798596 AGAAGCAATCTGAATATGATTCGTT 57.201 32.000 11.25 0.00 42.56 3.85
3781 3902 7.859598 AGAAGCAATCTGAATATGATTCGTTC 58.140 34.615 11.25 0.00 42.56 3.95
3782 3903 6.551385 AGCAATCTGAATATGATTCGTTCC 57.449 37.500 0.00 0.00 32.47 3.62
3783 3904 5.471456 AGCAATCTGAATATGATTCGTTCCC 59.529 40.000 0.00 0.00 32.47 3.97
3784 3905 5.239306 GCAATCTGAATATGATTCGTTCCCA 59.761 40.000 0.00 0.00 32.47 4.37
3785 3906 6.567321 GCAATCTGAATATGATTCGTTCCCAG 60.567 42.308 0.00 0.00 32.47 4.45
3786 3907 4.960938 TCTGAATATGATTCGTTCCCAGG 58.039 43.478 0.00 0.00 0.00 4.45
3787 3908 4.408921 TCTGAATATGATTCGTTCCCAGGT 59.591 41.667 0.00 0.00 0.00 4.00
3788 3909 4.703897 TGAATATGATTCGTTCCCAGGTC 58.296 43.478 0.00 0.00 0.00 3.85
3789 3910 3.771577 ATATGATTCGTTCCCAGGTCC 57.228 47.619 0.00 0.00 0.00 4.46
3790 3911 1.285280 ATGATTCGTTCCCAGGTCCA 58.715 50.000 0.00 0.00 0.00 4.02
3791 3912 0.613260 TGATTCGTTCCCAGGTCCAG 59.387 55.000 0.00 0.00 0.00 3.86
3792 3913 0.613777 GATTCGTTCCCAGGTCCAGT 59.386 55.000 0.00 0.00 0.00 4.00
3793 3914 0.324943 ATTCGTTCCCAGGTCCAGTG 59.675 55.000 0.00 0.00 0.00 3.66
3794 3915 2.358737 CGTTCCCAGGTCCAGTGC 60.359 66.667 0.00 0.00 0.00 4.40
3795 3916 2.034221 GTTCCCAGGTCCAGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
3796 3917 2.449518 TTCCCAGGTCCAGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
3797 3918 2.081787 TTCCCAGGTCCAGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
3798 3919 2.282462 CCCAGGTCCAGTGCCAAC 60.282 66.667 0.00 0.00 0.00 3.77
3799 3920 2.669569 CCAGGTCCAGTGCCAACG 60.670 66.667 0.00 0.00 0.00 4.10
3800 3921 3.357079 CAGGTCCAGTGCCAACGC 61.357 66.667 0.00 0.00 0.00 4.84
3801 3922 4.643387 AGGTCCAGTGCCAACGCC 62.643 66.667 0.00 0.00 0.00 5.68
3802 3923 4.947147 GGTCCAGTGCCAACGCCA 62.947 66.667 0.00 0.00 0.00 5.69
3803 3924 2.672996 GTCCAGTGCCAACGCCAT 60.673 61.111 0.00 0.00 0.00 4.40
3804 3925 2.672651 TCCAGTGCCAACGCCATG 60.673 61.111 0.00 0.00 0.00 3.66
3805 3926 4.424566 CCAGTGCCAACGCCATGC 62.425 66.667 0.00 0.00 0.00 4.06
3806 3927 4.424566 CAGTGCCAACGCCATGCC 62.425 66.667 0.00 0.00 0.00 4.40
3807 3928 4.666253 AGTGCCAACGCCATGCCT 62.666 61.111 0.00 0.00 0.00 4.75
3808 3929 2.749839 GTGCCAACGCCATGCCTA 60.750 61.111 0.00 0.00 0.00 3.93
3809 3930 2.120909 GTGCCAACGCCATGCCTAT 61.121 57.895 0.00 0.00 0.00 2.57
3810 3931 1.379710 TGCCAACGCCATGCCTATT 60.380 52.632 0.00 0.00 0.00 1.73
3811 3932 0.969917 TGCCAACGCCATGCCTATTT 60.970 50.000 0.00 0.00 0.00 1.40
3812 3933 0.249031 GCCAACGCCATGCCTATTTC 60.249 55.000 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 113 9.491675 CTAGCAGACTCTTATCATTCATCAATT 57.508 33.333 0.00 0.00 0.00 2.32
198 199 4.015084 CTGCATCCTTGTCTCCAAATCTT 58.985 43.478 0.00 0.00 0.00 2.40
442 443 1.224003 ACCCATCCATGCCTTCCCTT 61.224 55.000 0.00 0.00 0.00 3.95
447 449 1.077501 CGTCACCCATCCATGCCTT 60.078 57.895 0.00 0.00 0.00 4.35
524 526 3.923864 TGGGCGTGAACGTGAGCT 61.924 61.111 4.59 0.00 42.22 4.09
525 527 3.712881 GTGGGCGTGAACGTGAGC 61.713 66.667 4.59 0.00 42.22 4.26
526 528 3.403057 CGTGGGCGTGAACGTGAG 61.403 66.667 4.59 0.00 42.22 3.51
548 550 4.675029 ACGAGGTTTGGGTCGGCG 62.675 66.667 0.00 0.00 40.59 6.46
549 551 2.741211 GACGAGGTTTGGGTCGGC 60.741 66.667 0.00 0.00 40.59 5.54
550 552 2.047560 GGACGAGGTTTGGGTCGG 60.048 66.667 0.00 0.00 40.59 4.79
551 553 1.666872 GTGGACGAGGTTTGGGTCG 60.667 63.158 0.00 0.00 42.04 4.79
552 554 1.302271 GGTGGACGAGGTTTGGGTC 60.302 63.158 0.00 0.00 0.00 4.46
620 622 0.386858 TCGTCTGTGTAGCAGCGTTC 60.387 55.000 0.00 0.00 44.66 3.95
621 623 0.663568 GTCGTCTGTGTAGCAGCGTT 60.664 55.000 0.00 0.00 44.66 4.84
622 624 1.081376 GTCGTCTGTGTAGCAGCGT 60.081 57.895 0.00 0.00 44.66 5.07
623 625 0.663269 TTGTCGTCTGTGTAGCAGCG 60.663 55.000 0.00 0.00 44.66 5.18
624 626 1.192534 GTTTGTCGTCTGTGTAGCAGC 59.807 52.381 0.00 0.00 44.66 5.25
625 627 1.452025 CGTTTGTCGTCTGTGTAGCAG 59.548 52.381 0.00 0.00 46.34 4.24
626 628 1.483316 CGTTTGTCGTCTGTGTAGCA 58.517 50.000 0.00 0.00 34.52 3.49
627 629 0.782384 CCGTTTGTCGTCTGTGTAGC 59.218 55.000 0.00 0.00 37.94 3.58
628 630 0.782384 GCCGTTTGTCGTCTGTGTAG 59.218 55.000 0.00 0.00 37.94 2.74
629 631 0.935831 CGCCGTTTGTCGTCTGTGTA 60.936 55.000 0.00 0.00 37.94 2.90
630 632 2.235016 CGCCGTTTGTCGTCTGTGT 61.235 57.895 0.00 0.00 37.94 3.72
631 633 1.484227 TTCGCCGTTTGTCGTCTGTG 61.484 55.000 0.00 0.00 37.94 3.66
632 634 1.227031 TTCGCCGTTTGTCGTCTGT 60.227 52.632 0.00 0.00 37.94 3.41
633 635 1.200839 GTTCGCCGTTTGTCGTCTG 59.799 57.895 0.00 0.00 37.94 3.51
634 636 2.297912 CGTTCGCCGTTTGTCGTCT 61.298 57.895 0.00 0.00 37.94 4.18
635 637 1.611592 ATCGTTCGCCGTTTGTCGTC 61.612 55.000 0.00 0.00 37.94 4.20
636 638 1.216941 AATCGTTCGCCGTTTGTCGT 61.217 50.000 0.00 0.00 37.94 4.34
637 639 0.111001 AAATCGTTCGCCGTTTGTCG 60.111 50.000 0.00 0.00 37.94 4.35
638 640 1.314581 CAAATCGTTCGCCGTTTGTC 58.685 50.000 10.80 0.00 35.13 3.18
639 641 0.659123 GCAAATCGTTCGCCGTTTGT 60.659 50.000 15.73 0.05 38.57 2.83
640 642 0.658829 TGCAAATCGTTCGCCGTTTG 60.659 50.000 12.86 12.86 38.95 2.93
641 643 0.385473 CTGCAAATCGTTCGCCGTTT 60.385 50.000 0.00 0.00 37.94 3.60
642 644 1.206578 CTGCAAATCGTTCGCCGTT 59.793 52.632 0.00 0.00 37.94 4.44
643 645 1.666553 TCTGCAAATCGTTCGCCGT 60.667 52.632 0.00 0.00 37.94 5.68
644 646 1.225745 GTCTGCAAATCGTTCGCCG 60.226 57.895 0.00 0.00 38.13 6.46
645 647 1.225745 CGTCTGCAAATCGTTCGCC 60.226 57.895 0.00 0.00 0.00 5.54
646 648 0.370273 ATCGTCTGCAAATCGTTCGC 59.630 50.000 0.00 0.00 0.00 4.70
647 649 1.390123 ACATCGTCTGCAAATCGTTCG 59.610 47.619 0.00 0.00 0.00 3.95
648 650 3.542291 GCTACATCGTCTGCAAATCGTTC 60.542 47.826 0.00 0.00 0.00 3.95
649 651 2.348666 GCTACATCGTCTGCAAATCGTT 59.651 45.455 0.00 0.00 0.00 3.85
650 652 1.927174 GCTACATCGTCTGCAAATCGT 59.073 47.619 0.00 0.00 0.00 3.73
651 653 1.926510 TGCTACATCGTCTGCAAATCG 59.073 47.619 0.00 0.00 32.12 3.34
652 654 2.672874 TGTGCTACATCGTCTGCAAATC 59.327 45.455 0.00 0.00 37.17 2.17
653 655 2.698803 TGTGCTACATCGTCTGCAAAT 58.301 42.857 0.00 0.00 37.17 2.32
654 656 2.162319 TGTGCTACATCGTCTGCAAA 57.838 45.000 0.00 0.00 37.17 3.68
655 657 2.270923 GATGTGCTACATCGTCTGCAA 58.729 47.619 11.70 0.00 44.55 4.08
656 658 1.926561 GATGTGCTACATCGTCTGCA 58.073 50.000 11.70 0.00 44.55 4.41
664 666 0.107508 AGCGGCTTGATGTGCTACAT 60.108 50.000 0.00 2.02 42.43 2.29
665 667 0.740868 GAGCGGCTTGATGTGCTACA 60.741 55.000 2.97 0.00 37.91 2.74
666 668 0.740868 TGAGCGGCTTGATGTGCTAC 60.741 55.000 2.97 0.00 37.91 3.58
667 669 0.178767 ATGAGCGGCTTGATGTGCTA 59.821 50.000 2.97 0.00 37.91 3.49
668 670 0.679002 AATGAGCGGCTTGATGTGCT 60.679 50.000 2.97 0.00 41.11 4.40
669 671 0.171903 AAATGAGCGGCTTGATGTGC 59.828 50.000 2.97 0.00 0.00 4.57
670 672 1.200716 ACAAATGAGCGGCTTGATGTG 59.799 47.619 2.97 7.69 0.00 3.21
671 673 1.538047 ACAAATGAGCGGCTTGATGT 58.462 45.000 2.97 4.94 0.00 3.06
672 674 3.763097 TTACAAATGAGCGGCTTGATG 57.237 42.857 2.97 4.29 0.00 3.07
673 675 3.428045 GCTTTACAAATGAGCGGCTTGAT 60.428 43.478 2.97 0.00 0.00 2.57
674 676 2.095263 GCTTTACAAATGAGCGGCTTGA 60.095 45.455 2.97 0.00 0.00 3.02
675 677 2.253603 GCTTTACAAATGAGCGGCTTG 58.746 47.619 2.97 0.11 0.00 4.01
676 678 1.885887 TGCTTTACAAATGAGCGGCTT 59.114 42.857 2.97 0.00 39.23 4.35
677 679 1.533625 TGCTTTACAAATGAGCGGCT 58.466 45.000 0.00 0.00 39.23 5.52
678 680 2.346099 TTGCTTTACAAATGAGCGGC 57.654 45.000 0.00 0.00 39.23 6.53
686 688 7.148787 CGGTGTTGTTTAGTTTTGCTTTACAAA 60.149 33.333 0.00 0.00 46.51 2.83
687 689 6.308282 CGGTGTTGTTTAGTTTTGCTTTACAA 59.692 34.615 0.00 0.00 36.13 2.41
688 690 5.800941 CGGTGTTGTTTAGTTTTGCTTTACA 59.199 36.000 0.00 0.00 0.00 2.41
689 691 5.801444 ACGGTGTTGTTTAGTTTTGCTTTAC 59.199 36.000 0.00 0.00 0.00 2.01
690 692 5.952033 ACGGTGTTGTTTAGTTTTGCTTTA 58.048 33.333 0.00 0.00 0.00 1.85
691 693 4.811908 ACGGTGTTGTTTAGTTTTGCTTT 58.188 34.783 0.00 0.00 0.00 3.51
692 694 4.443913 ACGGTGTTGTTTAGTTTTGCTT 57.556 36.364 0.00 0.00 0.00 3.91
693 695 4.417506 GAACGGTGTTGTTTAGTTTTGCT 58.582 39.130 0.00 0.00 30.75 3.91
694 696 3.238798 CGAACGGTGTTGTTTAGTTTTGC 59.761 43.478 0.00 0.00 30.75 3.68
695 697 4.649977 TCGAACGGTGTTGTTTAGTTTTG 58.350 39.130 0.00 0.00 30.75 2.44
696 698 4.943142 TCGAACGGTGTTGTTTAGTTTT 57.057 36.364 0.00 0.00 30.75 2.43
697 699 4.024641 GGATCGAACGGTGTTGTTTAGTTT 60.025 41.667 0.00 0.00 30.75 2.66
698 700 3.495753 GGATCGAACGGTGTTGTTTAGTT 59.504 43.478 0.00 0.00 30.75 2.24
699 701 3.062042 GGATCGAACGGTGTTGTTTAGT 58.938 45.455 0.00 0.00 30.75 2.24
700 702 3.061322 TGGATCGAACGGTGTTGTTTAG 58.939 45.455 0.00 0.00 30.75 1.85
701 703 3.109044 TGGATCGAACGGTGTTGTTTA 57.891 42.857 0.00 0.00 30.75 2.01
702 704 1.956297 TGGATCGAACGGTGTTGTTT 58.044 45.000 0.00 0.00 30.75 2.83
703 705 1.600485 GTTGGATCGAACGGTGTTGTT 59.400 47.619 4.76 0.00 34.02 2.83
704 706 1.223187 GTTGGATCGAACGGTGTTGT 58.777 50.000 4.76 0.00 0.00 3.32
705 707 1.222300 TGTTGGATCGAACGGTGTTG 58.778 50.000 14.81 0.00 0.00 3.33
706 708 2.073816 GATGTTGGATCGAACGGTGTT 58.926 47.619 14.81 0.00 0.00 3.32
707 709 1.722011 GATGTTGGATCGAACGGTGT 58.278 50.000 14.81 2.47 0.00 4.16
708 710 0.645355 CGATGTTGGATCGAACGGTG 59.355 55.000 14.81 4.22 43.59 4.94
709 711 0.245539 ACGATGTTGGATCGAACGGT 59.754 50.000 14.81 10.10 43.59 4.83
710 712 0.921347 GACGATGTTGGATCGAACGG 59.079 55.000 14.81 9.55 43.59 4.44
711 713 0.921347 GGACGATGTTGGATCGAACG 59.079 55.000 14.81 6.74 43.59 3.95
712 714 1.927174 CTGGACGATGTTGGATCGAAC 59.073 52.381 13.18 13.18 43.59 3.95
713 715 1.548719 ACTGGACGATGTTGGATCGAA 59.451 47.619 10.83 0.00 43.59 3.71
714 716 1.135112 CACTGGACGATGTTGGATCGA 60.135 52.381 10.83 0.00 43.59 3.59
715 717 1.280982 CACTGGACGATGTTGGATCG 58.719 55.000 0.00 0.00 46.02 3.69
716 718 2.386661 ACACTGGACGATGTTGGATC 57.613 50.000 0.00 0.00 0.00 3.36
717 719 2.699954 GAACACTGGACGATGTTGGAT 58.300 47.619 0.00 0.00 39.13 3.41
718 720 1.604438 CGAACACTGGACGATGTTGGA 60.604 52.381 0.00 0.00 39.13 3.53
719 721 0.790207 CGAACACTGGACGATGTTGG 59.210 55.000 0.00 0.00 39.13 3.77
720 722 0.790207 CCGAACACTGGACGATGTTG 59.210 55.000 0.00 0.00 39.13 3.33
721 723 0.949105 GCCGAACACTGGACGATGTT 60.949 55.000 0.00 0.00 41.70 2.71
722 724 1.374252 GCCGAACACTGGACGATGT 60.374 57.895 0.00 0.00 0.00 3.06
723 725 2.100631 GGCCGAACACTGGACGATG 61.101 63.158 0.00 0.00 0.00 3.84
724 726 2.264794 GGCCGAACACTGGACGAT 59.735 61.111 0.00 0.00 0.00 3.73
727 729 3.934391 CTCCGGCCGAACACTGGAC 62.934 68.421 30.73 0.00 37.67 4.02
728 730 3.691342 CTCCGGCCGAACACTGGA 61.691 66.667 30.73 12.64 40.36 3.86
729 731 2.642254 TACTCCGGCCGAACACTGG 61.642 63.158 30.73 8.04 34.63 4.00
730 732 1.445582 GTACTCCGGCCGAACACTG 60.446 63.158 30.73 8.93 0.00 3.66
731 733 1.605738 AGTACTCCGGCCGAACACT 60.606 57.895 30.73 20.22 0.00 3.55
732 734 1.445582 CAGTACTCCGGCCGAACAC 60.446 63.158 30.73 18.21 0.00 3.32
733 735 1.870055 GACAGTACTCCGGCCGAACA 61.870 60.000 30.73 9.20 0.00 3.18
734 736 1.153881 GACAGTACTCCGGCCGAAC 60.154 63.158 30.73 18.55 0.00 3.95
735 737 2.693762 CGACAGTACTCCGGCCGAA 61.694 63.158 30.73 4.60 0.00 4.30
736 738 3.129502 CGACAGTACTCCGGCCGA 61.130 66.667 30.73 12.25 0.00 5.54
737 739 3.392595 GACGACAGTACTCCGGCCG 62.393 68.421 21.04 21.04 0.00 6.13
738 740 2.045131 AGACGACAGTACTCCGGCC 61.045 63.158 14.46 0.00 30.32 6.13
739 741 1.136984 CAGACGACAGTACTCCGGC 59.863 63.158 15.86 13.64 0.00 6.13
740 742 1.730501 TACAGACGACAGTACTCCGG 58.269 55.000 15.86 0.00 0.00 5.14
741 743 4.118410 ACTATACAGACGACAGTACTCCG 58.882 47.826 11.40 11.40 0.00 4.63
742 744 6.200665 CACTACTATACAGACGACAGTACTCC 59.799 46.154 0.00 0.00 0.00 3.85
743 745 6.292274 GCACTACTATACAGACGACAGTACTC 60.292 46.154 0.00 0.00 0.00 2.59
744 746 5.523188 GCACTACTATACAGACGACAGTACT 59.477 44.000 0.00 0.00 0.00 2.73
745 747 5.523188 AGCACTACTATACAGACGACAGTAC 59.477 44.000 0.00 0.00 0.00 2.73
746 748 5.522824 CAGCACTACTATACAGACGACAGTA 59.477 44.000 0.00 0.00 0.00 2.74
747 749 4.333095 CAGCACTACTATACAGACGACAGT 59.667 45.833 0.00 0.00 0.00 3.55
748 750 4.571176 TCAGCACTACTATACAGACGACAG 59.429 45.833 0.00 0.00 0.00 3.51
749 751 4.510571 TCAGCACTACTATACAGACGACA 58.489 43.478 0.00 0.00 0.00 4.35
750 752 5.467399 AGATCAGCACTACTATACAGACGAC 59.533 44.000 0.00 0.00 0.00 4.34
751 753 5.467063 CAGATCAGCACTACTATACAGACGA 59.533 44.000 0.00 0.00 0.00 4.20
752 754 5.684850 CAGATCAGCACTACTATACAGACG 58.315 45.833 0.00 0.00 0.00 4.18
753 755 5.009110 TGCAGATCAGCACTACTATACAGAC 59.991 44.000 8.95 0.00 40.11 3.51
754 756 5.133221 TGCAGATCAGCACTACTATACAGA 58.867 41.667 8.95 0.00 40.11 3.41
755 757 5.444663 TGCAGATCAGCACTACTATACAG 57.555 43.478 8.95 0.00 40.11 2.74
766 768 2.001872 CACGTAATGTGCAGATCAGCA 58.998 47.619 8.95 8.95 42.70 4.41
802 804 1.627550 GAAGGCGAGCCGTTTCTGAC 61.628 60.000 8.63 0.00 41.95 3.51
828 830 2.547913 CGGGTTTTAAATACGCACCC 57.452 50.000 13.14 13.14 43.43 4.61
868 870 2.956333 GGAGGGGGTCGGATTTTAAATG 59.044 50.000 0.00 0.00 0.00 2.32
884 886 0.175073 CGTCGGTTTAAGGAGGAGGG 59.825 60.000 0.00 0.00 0.00 4.30
938 945 1.043116 AGGATCGATCGCCAACAGGA 61.043 55.000 18.81 0.00 0.00 3.86
939 946 0.598680 GAGGATCGATCGCCAACAGG 60.599 60.000 18.81 0.00 0.00 4.00
940 947 2.892305 GAGGATCGATCGCCAACAG 58.108 57.895 18.81 0.00 0.00 3.16
1174 1213 2.686835 GGGCTCTGCTCCTGACCT 60.687 66.667 0.00 0.00 0.00 3.85
1195 1234 1.371267 GGCCGGAACAAAAAGACGC 60.371 57.895 5.05 0.00 0.00 5.19
1196 1235 0.040425 CAGGCCGGAACAAAAAGACG 60.040 55.000 5.05 0.00 0.00 4.18
1197 1236 1.029681 ACAGGCCGGAACAAAAAGAC 58.970 50.000 10.86 0.00 0.00 3.01
1198 1237 1.770294 AACAGGCCGGAACAAAAAGA 58.230 45.000 10.86 0.00 0.00 2.52
1199 1238 2.882137 TCTAACAGGCCGGAACAAAAAG 59.118 45.455 10.86 0.00 0.00 2.27
1208 1250 1.094785 CCACAAATCTAACAGGCCGG 58.905 55.000 0.00 0.00 0.00 6.13
1303 1345 2.700371 GCCTATTTCCCCAATCCCAAAG 59.300 50.000 0.00 0.00 0.00 2.77
1364 1469 2.122167 GGGCGGTCCACACAAACAA 61.122 57.895 0.00 0.00 35.00 2.83
1366 1471 0.953960 CTAGGGCGGTCCACACAAAC 60.954 60.000 0.00 0.00 38.24 2.93
1370 1475 2.722201 CCTCTAGGGCGGTCCACAC 61.722 68.421 0.00 0.00 38.24 3.82
1375 1480 1.998222 AGTAATCCTCTAGGGCGGTC 58.002 55.000 0.00 0.00 35.41 4.79
1407 1512 9.162764 GGTTGTATGACAATACATCAGTTTACT 57.837 33.333 0.00 0.00 46.23 2.24
1408 1513 8.114290 CGGTTGTATGACAATACATCAGTTTAC 58.886 37.037 0.00 0.00 46.23 2.01
1409 1514 7.279090 CCGGTTGTATGACAATACATCAGTTTA 59.721 37.037 0.00 0.00 46.23 2.01
1411 1516 5.584649 CCGGTTGTATGACAATACATCAGTT 59.415 40.000 0.00 0.00 46.23 3.16
1413 1518 4.024893 GCCGGTTGTATGACAATACATCAG 60.025 45.833 1.90 1.15 46.23 2.90
1414 1519 3.874543 GCCGGTTGTATGACAATACATCA 59.125 43.478 1.90 0.00 46.23 3.07
1415 1520 3.250040 GGCCGGTTGTATGACAATACATC 59.750 47.826 1.90 0.08 46.23 3.06
1416 1521 3.211045 GGCCGGTTGTATGACAATACAT 58.789 45.455 1.90 0.00 46.23 2.29
1417 1522 2.027100 TGGCCGGTTGTATGACAATACA 60.027 45.455 1.90 0.00 45.52 2.29
1418 1523 2.634600 TGGCCGGTTGTATGACAATAC 58.365 47.619 1.90 0.00 40.59 1.89
1424 1529 0.621082 TCCATTGGCCGGTTGTATGA 59.379 50.000 1.90 0.00 0.00 2.15
1427 1532 0.322997 CCTTCCATTGGCCGGTTGTA 60.323 55.000 1.90 0.00 0.00 2.41
1431 1536 1.304134 GAACCTTCCATTGGCCGGT 60.304 57.895 1.90 9.23 0.00 5.28
1433 1538 3.603365 GGAACCTTCCATTGGCCG 58.397 61.111 0.00 0.00 46.76 6.13
1440 1545 7.958180 CTCATTTGTTGAATCGGAACCTTCCA 61.958 42.308 4.94 0.00 39.61 3.53
1441 1546 4.217550 TCATTTGTTGAATCGGAACCTTCC 59.782 41.667 0.00 0.00 44.05 3.46
1442 1547 5.371115 TCATTTGTTGAATCGGAACCTTC 57.629 39.130 0.00 0.00 0.00 3.46
1497 1602 9.884636 TGTAACAAAGAACATGCACTAGTATAT 57.115 29.630 0.00 0.00 0.00 0.86
1498 1603 9.713713 TTGTAACAAAGAACATGCACTAGTATA 57.286 29.630 0.00 0.00 0.00 1.47
1499 1604 8.504005 GTTGTAACAAAGAACATGCACTAGTAT 58.496 33.333 0.00 0.00 31.72 2.12
1502 1607 6.959361 AGTTGTAACAAAGAACATGCACTAG 58.041 36.000 0.00 0.00 33.82 2.57
1549 1654 5.928264 TCCATATCATCACGCAACTGAATAG 59.072 40.000 0.00 0.00 0.00 1.73
1610 1715 1.027792 CAATTGGCTGGGCAAATGGC 61.028 55.000 13.22 0.00 43.74 4.40
1611 1716 0.325602 ACAATTGGCTGGGCAAATGG 59.674 50.000 22.48 9.32 31.90 3.16
1612 1717 1.270947 ACACAATTGGCTGGGCAAATG 60.271 47.619 18.84 18.84 31.90 2.32
1693 1798 0.307760 CTCGCCAACCTCACAACAAC 59.692 55.000 0.00 0.00 0.00 3.32
1694 1799 0.817634 CCTCGCCAACCTCACAACAA 60.818 55.000 0.00 0.00 0.00 2.83
1695 1800 1.227823 CCTCGCCAACCTCACAACA 60.228 57.895 0.00 0.00 0.00 3.33
1817 1922 3.441496 ACTTGCATTGTGTTGTCAAGG 57.559 42.857 0.00 0.00 36.21 3.61
1858 1963 5.404366 CACTATTTCGTGGGGTTCATATACG 59.596 44.000 0.00 0.00 36.20 3.06
1878 1983 5.887598 AGCAAACATATGAAATGGAGCACTA 59.112 36.000 10.38 0.00 0.00 2.74
1891 1996 9.920826 CACACTTTGTATAGTAGCAAACATATG 57.079 33.333 0.00 0.00 32.11 1.78
2099 2205 7.013750 GGATCAGAAGGAATCAGGGAAATTTAC 59.986 40.741 0.00 0.00 0.00 2.01
2147 2253 0.949105 ATGCGAAACTGACCGGACAC 60.949 55.000 9.46 0.00 0.00 3.67
2374 2490 0.683973 CAGATGGCCCGATAGCTTCT 59.316 55.000 0.00 0.00 0.00 2.85
2557 2673 2.477825 CTGTTGGAGCTCATACCATCG 58.522 52.381 17.19 0.00 36.02 3.84
2799 2915 2.107950 TGTTAATCAGCCTCCGGTTG 57.892 50.000 0.00 0.00 35.19 3.77
3055 3176 5.376625 AGTGTGATTTCTGCCTTTGACTTA 58.623 37.500 0.00 0.00 0.00 2.24
3129 3250 2.830321 AGTAATTCGAAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
3138 3259 6.576551 TTTTTGTGGCAAGTAATTCGAAAC 57.423 33.333 0.00 0.00 0.00 2.78
3140 3261 5.694006 CCATTTTTGTGGCAAGTAATTCGAA 59.306 36.000 0.00 0.00 31.43 3.71
3141 3262 5.010112 TCCATTTTTGTGGCAAGTAATTCGA 59.990 36.000 0.00 0.00 39.19 3.71
3150 3271 5.999205 AGATACATCCATTTTTGTGGCAA 57.001 34.783 0.00 0.00 39.19 4.52
3153 3274 7.864108 TGTCTAGATACATCCATTTTTGTGG 57.136 36.000 0.00 0.00 40.76 4.17
3207 3328 9.062524 GCCTATCTATGTCTTCTCGTATATCAT 57.937 37.037 0.00 0.00 0.00 2.45
3208 3329 7.499563 GGCCTATCTATGTCTTCTCGTATATCA 59.500 40.741 0.00 0.00 0.00 2.15
3231 3352 6.981722 TCTTCTCAAAAATTAGAACTTGGCC 58.018 36.000 0.00 0.00 0.00 5.36
3269 3390 5.826601 TGTCAGTTCACAAAAGCATTACA 57.173 34.783 0.00 0.00 0.00 2.41
3290 3411 8.869897 ACAAAAGTATACGACATAACACTCATG 58.130 33.333 0.00 0.00 0.00 3.07
3296 3417 5.352016 GCCCACAAAAGTATACGACATAACA 59.648 40.000 0.00 0.00 0.00 2.41
3304 3425 2.980568 TCCAGCCCACAAAAGTATACG 58.019 47.619 0.00 0.00 0.00 3.06
3333 3454 1.421410 GCATGGCTGAGTAACGACCG 61.421 60.000 0.00 0.00 0.00 4.79
3354 3475 7.725844 CCCATAAGCCATATTCTCCTTAACTTT 59.274 37.037 0.00 0.00 0.00 2.66
3388 3509 1.515954 CGTGCTACCGTCTCCCAAT 59.484 57.895 0.00 0.00 0.00 3.16
3412 3533 2.861935 CGCCATACAAACCGGTAGTAAG 59.138 50.000 19.84 16.15 0.00 2.34
3417 3538 0.460635 GAGCGCCATACAAACCGGTA 60.461 55.000 8.00 0.00 0.00 4.02
3431 3552 5.238583 ACACCTATCCTATTATTTGAGCGC 58.761 41.667 0.00 0.00 0.00 5.92
3482 3603 3.705604 CTTGGCGAGCTTTTCTCAAAAA 58.294 40.909 0.00 0.00 41.98 1.94
3483 3604 3.354089 CTTGGCGAGCTTTTCTCAAAA 57.646 42.857 0.00 0.00 41.98 2.44
3495 3616 2.945008 TGATCAATAAAGGCTTGGCGAG 59.055 45.455 0.00 0.00 0.00 5.03
3496 3617 2.997980 TGATCAATAAAGGCTTGGCGA 58.002 42.857 0.00 0.00 0.00 5.54
3497 3618 3.129287 AGTTGATCAATAAAGGCTTGGCG 59.871 43.478 12.12 0.00 0.00 5.69
3498 3619 4.725790 AGTTGATCAATAAAGGCTTGGC 57.274 40.909 12.12 0.00 0.00 4.52
3499 3620 9.143631 CTTTTTAGTTGATCAATAAAGGCTTGG 57.856 33.333 12.12 0.00 0.00 3.61
3500 3621 9.696917 ACTTTTTAGTTGATCAATAAAGGCTTG 57.303 29.630 23.80 15.12 0.00 4.01
3521 3642 9.555411 ACCCAATTGTAATCCCTATAAACTTTT 57.445 29.630 4.43 0.00 0.00 2.27
3522 3643 9.197306 GACCCAATTGTAATCCCTATAAACTTT 57.803 33.333 4.43 0.00 0.00 2.66
3523 3644 8.340757 TGACCCAATTGTAATCCCTATAAACTT 58.659 33.333 4.43 0.00 0.00 2.66
3524 3645 7.878495 TGACCCAATTGTAATCCCTATAAACT 58.122 34.615 4.43 0.00 0.00 2.66
3525 3646 8.576442 CATGACCCAATTGTAATCCCTATAAAC 58.424 37.037 4.43 0.00 0.00 2.01
3526 3647 7.232534 GCATGACCCAATTGTAATCCCTATAAA 59.767 37.037 4.43 0.00 0.00 1.40
3527 3648 6.719370 GCATGACCCAATTGTAATCCCTATAA 59.281 38.462 4.43 0.00 0.00 0.98
3528 3649 6.045459 AGCATGACCCAATTGTAATCCCTATA 59.955 38.462 4.43 0.00 0.00 1.31
3529 3650 5.079643 GCATGACCCAATTGTAATCCCTAT 58.920 41.667 4.43 0.00 0.00 2.57
3530 3651 4.167892 AGCATGACCCAATTGTAATCCCTA 59.832 41.667 4.43 0.00 0.00 3.53
3531 3652 3.052642 AGCATGACCCAATTGTAATCCCT 60.053 43.478 4.43 0.00 0.00 4.20
3532 3653 3.068590 CAGCATGACCCAATTGTAATCCC 59.931 47.826 4.43 0.00 39.69 3.85
3533 3654 3.068590 CCAGCATGACCCAATTGTAATCC 59.931 47.826 4.43 0.00 39.69 3.01
3534 3655 3.953612 TCCAGCATGACCCAATTGTAATC 59.046 43.478 4.43 0.00 39.69 1.75
3535 3656 3.979911 TCCAGCATGACCCAATTGTAAT 58.020 40.909 4.43 0.00 39.69 1.89
3536 3657 3.448093 TCCAGCATGACCCAATTGTAA 57.552 42.857 4.43 0.00 39.69 2.41
3537 3658 3.289836 CATCCAGCATGACCCAATTGTA 58.710 45.455 4.43 0.00 39.69 2.41
3538 3659 2.104967 CATCCAGCATGACCCAATTGT 58.895 47.619 4.43 0.00 39.69 2.71
3539 3660 1.202486 GCATCCAGCATGACCCAATTG 60.202 52.381 0.00 0.00 44.79 2.32
3540 3661 1.117150 GCATCCAGCATGACCCAATT 58.883 50.000 0.00 0.00 44.79 2.32
3541 3662 2.816746 GCATCCAGCATGACCCAAT 58.183 52.632 0.00 0.00 44.79 3.16
3542 3663 4.342427 GCATCCAGCATGACCCAA 57.658 55.556 0.00 0.00 44.79 4.12
3551 3672 1.470996 TTTGTGGTTGGGCATCCAGC 61.471 55.000 0.00 0.00 45.04 4.85
3552 3673 1.066716 CATTTGTGGTTGGGCATCCAG 60.067 52.381 0.00 0.00 45.04 3.86
3553 3674 0.975135 CATTTGTGGTTGGGCATCCA 59.025 50.000 0.00 0.00 42.25 3.41
3554 3675 0.391528 GCATTTGTGGTTGGGCATCC 60.392 55.000 0.00 0.00 0.00 3.51
3555 3676 0.391528 GGCATTTGTGGTTGGGCATC 60.392 55.000 0.00 0.00 0.00 3.91
3556 3677 0.837260 AGGCATTTGTGGTTGGGCAT 60.837 50.000 0.00 0.00 0.00 4.40
3557 3678 1.459158 AGGCATTTGTGGTTGGGCA 60.459 52.632 0.00 0.00 0.00 5.36
3558 3679 1.187567 AGAGGCATTTGTGGTTGGGC 61.188 55.000 0.00 0.00 0.00 5.36
3559 3680 0.890683 GAGAGGCATTTGTGGTTGGG 59.109 55.000 0.00 0.00 0.00 4.12
3560 3681 1.619654 TGAGAGGCATTTGTGGTTGG 58.380 50.000 0.00 0.00 0.00 3.77
3561 3682 2.361757 TGTTGAGAGGCATTTGTGGTTG 59.638 45.455 0.00 0.00 0.00 3.77
3562 3683 2.624838 CTGTTGAGAGGCATTTGTGGTT 59.375 45.455 0.00 0.00 0.00 3.67
3563 3684 2.233271 CTGTTGAGAGGCATTTGTGGT 58.767 47.619 0.00 0.00 0.00 4.16
3564 3685 1.542915 CCTGTTGAGAGGCATTTGTGG 59.457 52.381 0.00 0.00 0.00 4.17
3565 3686 2.507484 TCCTGTTGAGAGGCATTTGTG 58.493 47.619 0.00 0.00 32.51 3.33
3566 3687 2.957402 TCCTGTTGAGAGGCATTTGT 57.043 45.000 0.00 0.00 32.51 2.83
3567 3688 3.057736 CACTTCCTGTTGAGAGGCATTTG 60.058 47.826 0.00 0.00 32.51 2.32
3568 3689 3.152341 CACTTCCTGTTGAGAGGCATTT 58.848 45.455 0.00 0.00 32.51 2.32
3569 3690 2.373169 TCACTTCCTGTTGAGAGGCATT 59.627 45.455 0.00 0.00 32.51 3.56
3570 3691 1.980765 TCACTTCCTGTTGAGAGGCAT 59.019 47.619 0.00 0.00 32.51 4.40
3571 3692 1.345741 CTCACTTCCTGTTGAGAGGCA 59.654 52.381 0.00 0.00 32.51 4.75
3572 3693 1.620819 TCTCACTTCCTGTTGAGAGGC 59.379 52.381 0.00 0.00 32.85 4.70
3573 3694 4.142049 GGTATCTCACTTCCTGTTGAGAGG 60.142 50.000 7.33 0.00 36.78 3.69
3574 3695 4.464244 TGGTATCTCACTTCCTGTTGAGAG 59.536 45.833 7.33 0.00 36.78 3.20
3575 3696 4.416516 TGGTATCTCACTTCCTGTTGAGA 58.583 43.478 3.88 3.88 37.30 3.27
3576 3697 4.808414 TGGTATCTCACTTCCTGTTGAG 57.192 45.455 0.00 0.00 0.00 3.02
3577 3698 5.560722 TTTGGTATCTCACTTCCTGTTGA 57.439 39.130 0.00 0.00 0.00 3.18
3578 3699 6.176183 AGATTTGGTATCTCACTTCCTGTTG 58.824 40.000 0.00 0.00 0.00 3.33
3579 3700 6.380079 AGATTTGGTATCTCACTTCCTGTT 57.620 37.500 0.00 0.00 0.00 3.16
3580 3701 6.407525 GCTAGATTTGGTATCTCACTTCCTGT 60.408 42.308 0.00 0.00 0.00 4.00
3581 3702 5.988561 GCTAGATTTGGTATCTCACTTCCTG 59.011 44.000 0.00 0.00 0.00 3.86
3582 3703 5.663106 TGCTAGATTTGGTATCTCACTTCCT 59.337 40.000 0.00 0.00 0.00 3.36
3583 3704 5.918608 TGCTAGATTTGGTATCTCACTTCC 58.081 41.667 0.00 0.00 0.00 3.46
3584 3705 7.044798 ACTTGCTAGATTTGGTATCTCACTTC 58.955 38.462 1.04 0.00 0.00 3.01
3585 3706 6.951971 ACTTGCTAGATTTGGTATCTCACTT 58.048 36.000 1.04 0.00 0.00 3.16
3586 3707 6.382570 AGACTTGCTAGATTTGGTATCTCACT 59.617 38.462 1.04 0.00 0.00 3.41
3587 3708 6.578023 AGACTTGCTAGATTTGGTATCTCAC 58.422 40.000 1.04 0.00 0.00 3.51
3588 3709 6.798427 AGACTTGCTAGATTTGGTATCTCA 57.202 37.500 1.04 0.00 0.00 3.27
3589 3710 8.580720 TCATAGACTTGCTAGATTTGGTATCTC 58.419 37.037 1.04 0.00 31.33 2.75
3590 3711 8.484214 TCATAGACTTGCTAGATTTGGTATCT 57.516 34.615 1.04 0.00 31.33 1.98
3591 3712 7.330700 GCTCATAGACTTGCTAGATTTGGTATC 59.669 40.741 1.04 0.00 31.33 2.24
3592 3713 7.158021 GCTCATAGACTTGCTAGATTTGGTAT 58.842 38.462 1.04 0.00 31.33 2.73
3593 3714 6.463049 GGCTCATAGACTTGCTAGATTTGGTA 60.463 42.308 1.04 0.00 31.33 3.25
3594 3715 5.363939 GCTCATAGACTTGCTAGATTTGGT 58.636 41.667 1.04 0.00 31.33 3.67
3595 3716 4.754114 GGCTCATAGACTTGCTAGATTTGG 59.246 45.833 1.04 0.00 31.33 3.28
3596 3717 5.609423 AGGCTCATAGACTTGCTAGATTTG 58.391 41.667 1.04 0.00 17.74 2.32
3597 3718 5.365025 TGAGGCTCATAGACTTGCTAGATTT 59.635 40.000 14.43 0.00 30.20 2.17
3598 3719 4.898265 TGAGGCTCATAGACTTGCTAGATT 59.102 41.667 14.43 0.00 30.20 2.40
3599 3720 4.478203 TGAGGCTCATAGACTTGCTAGAT 58.522 43.478 14.43 0.00 30.20 1.98
3600 3721 3.903467 TGAGGCTCATAGACTTGCTAGA 58.097 45.455 14.43 0.00 30.20 2.43
3601 3722 4.870123 ATGAGGCTCATAGACTTGCTAG 57.130 45.455 27.87 0.00 30.20 3.42
3611 3732 4.720046 AGAGTCGAACTATGAGGCTCATA 58.280 43.478 29.92 29.92 38.26 2.15
3612 3733 3.561143 AGAGTCGAACTATGAGGCTCAT 58.439 45.455 30.89 30.89 40.72 2.90
3613 3734 2.946329 GAGAGTCGAACTATGAGGCTCA 59.054 50.000 21.19 21.19 0.00 4.26
3614 3735 2.032377 CGAGAGTCGAACTATGAGGCTC 60.032 54.545 7.79 7.79 43.74 4.70
3615 3736 1.944024 CGAGAGTCGAACTATGAGGCT 59.056 52.381 0.00 0.00 43.74 4.58
3616 3737 1.941294 TCGAGAGTCGAACTATGAGGC 59.059 52.381 0.00 0.00 46.90 4.70
3627 3748 2.991434 TCTTTGAACCTCGAGAGTCG 57.009 50.000 15.71 0.00 42.10 4.18
3628 3749 5.986004 TTTTTCTTTGAACCTCGAGAGTC 57.014 39.130 15.71 11.07 0.00 3.36
3647 3768 7.073265 CACCTTATTCACGACGTGTAATTTTT 58.927 34.615 26.01 5.48 34.79 1.94
3648 3769 6.347888 CCACCTTATTCACGACGTGTAATTTT 60.348 38.462 26.01 5.84 34.79 1.82
3649 3770 5.121142 CCACCTTATTCACGACGTGTAATTT 59.879 40.000 26.01 6.19 34.79 1.82
3650 3771 4.628333 CCACCTTATTCACGACGTGTAATT 59.372 41.667 26.01 12.51 34.79 1.40
3651 3772 4.082081 TCCACCTTATTCACGACGTGTAAT 60.082 41.667 26.01 23.03 34.79 1.89
3652 3773 3.255395 TCCACCTTATTCACGACGTGTAA 59.745 43.478 26.01 18.64 34.79 2.41
3653 3774 2.819019 TCCACCTTATTCACGACGTGTA 59.181 45.455 26.01 18.33 34.79 2.90
3654 3775 1.614903 TCCACCTTATTCACGACGTGT 59.385 47.619 26.01 11.78 34.79 4.49
3655 3776 2.357327 TCCACCTTATTCACGACGTG 57.643 50.000 21.88 21.88 34.45 4.49
3656 3777 2.298163 ACTTCCACCTTATTCACGACGT 59.702 45.455 0.00 0.00 0.00 4.34
3657 3778 2.955614 ACTTCCACCTTATTCACGACG 58.044 47.619 0.00 0.00 0.00 5.12
3658 3779 4.514066 ACAAACTTCCACCTTATTCACGAC 59.486 41.667 0.00 0.00 0.00 4.34
3659 3780 4.710324 ACAAACTTCCACCTTATTCACGA 58.290 39.130 0.00 0.00 0.00 4.35
3660 3781 6.425721 TCTTACAAACTTCCACCTTATTCACG 59.574 38.462 0.00 0.00 0.00 4.35
3661 3782 7.739498 TCTTACAAACTTCCACCTTATTCAC 57.261 36.000 0.00 0.00 0.00 3.18
3662 3783 8.383175 AGATCTTACAAACTTCCACCTTATTCA 58.617 33.333 0.00 0.00 0.00 2.57
3663 3784 8.794335 AGATCTTACAAACTTCCACCTTATTC 57.206 34.615 0.00 0.00 0.00 1.75
3664 3785 8.606830 AGAGATCTTACAAACTTCCACCTTATT 58.393 33.333 0.00 0.00 0.00 1.40
3665 3786 8.152023 AGAGATCTTACAAACTTCCACCTTAT 57.848 34.615 0.00 0.00 0.00 1.73
3666 3787 7.554959 AGAGATCTTACAAACTTCCACCTTA 57.445 36.000 0.00 0.00 0.00 2.69
3667 3788 6.441088 AGAGATCTTACAAACTTCCACCTT 57.559 37.500 0.00 0.00 0.00 3.50
3668 3789 6.441088 AAGAGATCTTACAAACTTCCACCT 57.559 37.500 0.00 0.00 33.79 4.00
3669 3790 6.710744 TCAAAGAGATCTTACAAACTTCCACC 59.289 38.462 0.00 0.00 34.61 4.61
3670 3791 7.730364 TCAAAGAGATCTTACAAACTTCCAC 57.270 36.000 0.00 0.00 34.61 4.02
3671 3792 8.156820 TCATCAAAGAGATCTTACAAACTTCCA 58.843 33.333 0.00 0.00 33.72 3.53
3672 3793 8.553459 TCATCAAAGAGATCTTACAAACTTCC 57.447 34.615 0.00 0.00 33.72 3.46
3678 3799 9.060347 GGCATTATCATCAAAGAGATCTTACAA 57.940 33.333 0.00 0.00 33.72 2.41
3679 3800 8.212995 TGGCATTATCATCAAAGAGATCTTACA 58.787 33.333 0.00 0.00 33.72 2.41
3680 3801 8.613060 TGGCATTATCATCAAAGAGATCTTAC 57.387 34.615 0.00 0.00 33.72 2.34
3681 3802 9.227777 CATGGCATTATCATCAAAGAGATCTTA 57.772 33.333 0.00 0.00 33.72 2.10
3682 3803 7.942894 TCATGGCATTATCATCAAAGAGATCTT 59.057 33.333 0.00 0.00 33.72 2.40
3683 3804 7.459234 TCATGGCATTATCATCAAAGAGATCT 58.541 34.615 0.00 0.00 33.72 2.75
3684 3805 7.683437 TCATGGCATTATCATCAAAGAGATC 57.317 36.000 0.00 0.00 33.72 2.75
3685 3806 7.065923 CGATCATGGCATTATCATCAAAGAGAT 59.934 37.037 18.83 5.37 37.48 2.75
3686 3807 6.370718 CGATCATGGCATTATCATCAAAGAGA 59.629 38.462 18.83 0.85 0.00 3.10
3687 3808 6.543736 CGATCATGGCATTATCATCAAAGAG 58.456 40.000 18.83 0.03 0.00 2.85
3688 3809 5.106436 GCGATCATGGCATTATCATCAAAGA 60.106 40.000 18.83 1.51 0.00 2.52
3689 3810 5.093457 GCGATCATGGCATTATCATCAAAG 58.907 41.667 18.83 5.39 0.00 2.77
3690 3811 4.082625 GGCGATCATGGCATTATCATCAAA 60.083 41.667 18.83 0.00 0.00 2.69
3691 3812 3.441222 GGCGATCATGGCATTATCATCAA 59.559 43.478 18.83 0.00 0.00 2.57
3692 3813 3.011818 GGCGATCATGGCATTATCATCA 58.988 45.455 18.83 0.00 0.00 3.07
3693 3814 2.357009 GGGCGATCATGGCATTATCATC 59.643 50.000 18.83 10.89 35.84 2.92
3694 3815 2.372264 GGGCGATCATGGCATTATCAT 58.628 47.619 18.83 0.88 35.84 2.45
3695 3816 1.614051 GGGGCGATCATGGCATTATCA 60.614 52.381 18.83 0.00 35.84 2.15
3696 3817 1.098050 GGGGCGATCATGGCATTATC 58.902 55.000 10.91 10.91 35.84 1.75
3697 3818 0.323725 GGGGGCGATCATGGCATTAT 60.324 55.000 0.00 0.00 35.84 1.28
3698 3819 1.074775 GGGGGCGATCATGGCATTA 59.925 57.895 0.00 0.00 35.84 1.90
3699 3820 2.203538 GGGGGCGATCATGGCATT 60.204 61.111 0.00 0.00 35.84 3.56
3713 3834 0.542938 TATCCATCAGAGAGCGGGGG 60.543 60.000 0.00 0.00 0.00 5.40
3714 3835 1.206610 CATATCCATCAGAGAGCGGGG 59.793 57.143 0.00 0.00 0.00 5.73
3715 3836 2.174360 TCATATCCATCAGAGAGCGGG 58.826 52.381 0.00 0.00 0.00 6.13
3716 3837 4.468765 AATCATATCCATCAGAGAGCGG 57.531 45.455 0.00 0.00 0.00 5.52
3717 3838 6.629128 AGTAAATCATATCCATCAGAGAGCG 58.371 40.000 0.00 0.00 0.00 5.03
3718 3839 7.978975 GGTAGTAAATCATATCCATCAGAGAGC 59.021 40.741 0.00 0.00 0.00 4.09
3719 3840 8.474025 GGGTAGTAAATCATATCCATCAGAGAG 58.526 40.741 0.00 0.00 0.00 3.20
3720 3841 7.122799 CGGGTAGTAAATCATATCCATCAGAGA 59.877 40.741 0.00 0.00 0.00 3.10
3721 3842 7.261325 CGGGTAGTAAATCATATCCATCAGAG 58.739 42.308 0.00 0.00 0.00 3.35
3722 3843 6.351033 GCGGGTAGTAAATCATATCCATCAGA 60.351 42.308 0.00 0.00 0.00 3.27
3723 3844 5.812642 GCGGGTAGTAAATCATATCCATCAG 59.187 44.000 0.00 0.00 0.00 2.90
3724 3845 5.483937 AGCGGGTAGTAAATCATATCCATCA 59.516 40.000 0.00 0.00 0.00 3.07
3725 3846 5.978814 AGCGGGTAGTAAATCATATCCATC 58.021 41.667 0.00 0.00 0.00 3.51
3726 3847 5.483937 TGAGCGGGTAGTAAATCATATCCAT 59.516 40.000 0.00 0.00 0.00 3.41
3727 3848 4.836175 TGAGCGGGTAGTAAATCATATCCA 59.164 41.667 0.00 0.00 0.00 3.41
3728 3849 5.169295 GTGAGCGGGTAGTAAATCATATCC 58.831 45.833 0.00 0.00 0.00 2.59
3729 3850 5.779922 TGTGAGCGGGTAGTAAATCATATC 58.220 41.667 0.00 0.00 0.00 1.63
3730 3851 5.304614 ACTGTGAGCGGGTAGTAAATCATAT 59.695 40.000 0.00 0.00 0.00 1.78
3731 3852 4.647853 ACTGTGAGCGGGTAGTAAATCATA 59.352 41.667 0.00 0.00 0.00 2.15
3732 3853 3.451178 ACTGTGAGCGGGTAGTAAATCAT 59.549 43.478 0.00 0.00 0.00 2.45
3733 3854 2.829720 ACTGTGAGCGGGTAGTAAATCA 59.170 45.455 0.00 0.00 0.00 2.57
3734 3855 3.119245 TGACTGTGAGCGGGTAGTAAATC 60.119 47.826 0.00 0.00 0.00 2.17
3735 3856 2.829720 TGACTGTGAGCGGGTAGTAAAT 59.170 45.455 0.00 0.00 0.00 1.40
3736 3857 2.230508 CTGACTGTGAGCGGGTAGTAAA 59.769 50.000 0.00 0.00 0.00 2.01
3737 3858 1.816835 CTGACTGTGAGCGGGTAGTAA 59.183 52.381 0.00 0.00 0.00 2.24
3738 3859 1.003928 TCTGACTGTGAGCGGGTAGTA 59.996 52.381 0.00 0.00 0.00 1.82
3739 3860 0.251209 TCTGACTGTGAGCGGGTAGT 60.251 55.000 0.00 0.00 0.00 2.73
3740 3861 0.888619 TTCTGACTGTGAGCGGGTAG 59.111 55.000 0.00 0.00 0.00 3.18
3741 3862 0.888619 CTTCTGACTGTGAGCGGGTA 59.111 55.000 0.00 0.00 0.00 3.69
3742 3863 1.668294 CTTCTGACTGTGAGCGGGT 59.332 57.895 0.00 0.00 0.00 5.28
3743 3864 1.739562 GCTTCTGACTGTGAGCGGG 60.740 63.158 0.00 0.00 0.00 6.13
3744 3865 0.601046 TTGCTTCTGACTGTGAGCGG 60.601 55.000 0.00 0.00 0.00 5.52
3745 3866 1.392853 GATTGCTTCTGACTGTGAGCG 59.607 52.381 0.00 0.00 0.00 5.03
3746 3867 2.697654 AGATTGCTTCTGACTGTGAGC 58.302 47.619 0.00 0.00 31.79 4.26
3756 3877 7.041508 GGAACGAATCATATTCAGATTGCTTCT 60.042 37.037 0.00 0.00 35.93 2.85
3757 3878 7.074502 GGAACGAATCATATTCAGATTGCTTC 58.925 38.462 0.00 0.00 35.93 3.86
3758 3879 6.016777 GGGAACGAATCATATTCAGATTGCTT 60.017 38.462 0.00 0.00 35.93 3.91
3759 3880 5.471456 GGGAACGAATCATATTCAGATTGCT 59.529 40.000 0.00 0.00 35.93 3.91
3760 3881 5.239306 TGGGAACGAATCATATTCAGATTGC 59.761 40.000 0.00 0.00 35.93 3.56
3761 3882 6.072838 CCTGGGAACGAATCATATTCAGATTG 60.073 42.308 0.00 0.00 35.93 2.67
3762 3883 6.000219 CCTGGGAACGAATCATATTCAGATT 59.000 40.000 0.00 0.00 38.35 2.40
3763 3884 5.072329 ACCTGGGAACGAATCATATTCAGAT 59.928 40.000 0.00 0.00 0.00 2.90
3764 3885 4.408921 ACCTGGGAACGAATCATATTCAGA 59.591 41.667 0.00 0.00 0.00 3.27
3765 3886 4.708177 ACCTGGGAACGAATCATATTCAG 58.292 43.478 0.00 0.00 0.00 3.02
3766 3887 4.444306 GGACCTGGGAACGAATCATATTCA 60.444 45.833 0.00 0.00 0.00 2.57
3767 3888 4.065789 GGACCTGGGAACGAATCATATTC 58.934 47.826 0.00 0.00 0.00 1.75
3768 3889 3.458118 TGGACCTGGGAACGAATCATATT 59.542 43.478 0.00 0.00 0.00 1.28
3769 3890 3.045634 TGGACCTGGGAACGAATCATAT 58.954 45.455 0.00 0.00 0.00 1.78
3770 3891 2.434336 CTGGACCTGGGAACGAATCATA 59.566 50.000 0.00 0.00 0.00 2.15
3771 3892 1.210478 CTGGACCTGGGAACGAATCAT 59.790 52.381 0.00 0.00 0.00 2.45
3772 3893 0.613260 CTGGACCTGGGAACGAATCA 59.387 55.000 0.00 0.00 0.00 2.57
3773 3894 0.613777 ACTGGACCTGGGAACGAATC 59.386 55.000 0.00 0.00 0.00 2.52
3774 3895 0.324943 CACTGGACCTGGGAACGAAT 59.675 55.000 0.00 0.00 0.00 3.34
3775 3896 1.752198 CACTGGACCTGGGAACGAA 59.248 57.895 0.00 0.00 0.00 3.85
3776 3897 2.879233 GCACTGGACCTGGGAACGA 61.879 63.158 4.52 0.00 0.00 3.85
3777 3898 2.358737 GCACTGGACCTGGGAACG 60.359 66.667 4.52 0.00 0.00 3.95
3778 3899 2.034221 GGCACTGGACCTGGGAAC 59.966 66.667 4.52 0.00 0.00 3.62
3779 3900 2.081787 TTGGCACTGGACCTGGGAA 61.082 57.895 4.52 0.00 0.00 3.97
3780 3901 2.449518 TTGGCACTGGACCTGGGA 60.450 61.111 4.52 0.00 0.00 4.37
3781 3902 2.282462 GTTGGCACTGGACCTGGG 60.282 66.667 0.00 0.00 0.00 4.45
3782 3903 2.669569 CGTTGGCACTGGACCTGG 60.670 66.667 3.15 0.00 0.00 4.45
3783 3904 3.357079 GCGTTGGCACTGGACCTG 61.357 66.667 0.00 0.00 39.62 4.00
3784 3905 4.643387 GGCGTTGGCACTGGACCT 62.643 66.667 0.00 0.00 42.47 3.85
3785 3906 4.947147 TGGCGTTGGCACTGGACC 62.947 66.667 0.00 0.00 42.47 4.46
3786 3907 2.672996 ATGGCGTTGGCACTGGAC 60.673 61.111 0.00 0.00 41.84 4.02
3787 3908 2.672651 CATGGCGTTGGCACTGGA 60.673 61.111 0.00 0.00 41.84 3.86
3788 3909 4.424566 GCATGGCGTTGGCACTGG 62.425 66.667 0.00 0.00 41.84 4.00
3789 3910 4.424566 GGCATGGCGTTGGCACTG 62.425 66.667 2.41 0.00 41.84 3.66
3790 3911 2.556840 ATAGGCATGGCGTTGGCACT 62.557 55.000 14.30 0.00 44.16 4.40
3791 3912 1.666209 AATAGGCATGGCGTTGGCAC 61.666 55.000 14.30 0.00 44.16 5.01
3792 3913 0.969917 AAATAGGCATGGCGTTGGCA 60.970 50.000 14.30 0.00 44.16 4.92
3793 3914 0.249031 GAAATAGGCATGGCGTTGGC 60.249 55.000 14.30 5.78 42.18 4.52
3794 3915 3.944871 GAAATAGGCATGGCGTTGG 57.055 52.632 14.30 0.00 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.